Query 007604
Match_columns 596
No_of_seqs 201 out of 2403
Neff 8.9
Searched_HMMs 46136
Date Thu Mar 28 12:52:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007604.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007604hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 1.6E-47 3.4E-52 415.2 38.6 529 28-568 32-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 6.6E-41 1.4E-45 345.7 29.5 461 29-563 17-491 (498)
3 PRK10207 dipeptide/tripeptide 100.0 3E-36 6.6E-41 327.1 42.6 462 29-565 10-482 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 3.4E-35 7.4E-40 318.6 40.7 453 29-563 6-472 (475)
5 PRK15462 dipeptide/tripeptide 100.0 7.7E-35 1.7E-39 311.8 41.2 427 31-516 7-438 (493)
6 PRK09584 tppB putative tripept 100.0 4.2E-34 9.2E-39 311.9 41.7 457 30-565 18-485 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 1.8E-27 3.9E-32 263.4 39.9 334 47-435 1-341 (654)
8 TIGR01299 synapt_SV2 synaptic 99.9 9.1E-25 2E-29 244.8 37.8 156 53-239 186-354 (742)
9 PRK05122 major facilitator sup 99.9 2.8E-24 6.1E-29 228.6 37.3 374 32-558 14-388 (399)
10 PRK11551 putative 3-hydroxyphe 99.9 2.3E-24 5.1E-29 229.7 36.6 357 31-517 13-369 (406)
11 PRK03545 putative arabinose tr 99.9 2.5E-24 5.4E-29 228.4 35.1 374 31-560 7-381 (390)
12 PRK12382 putative transporter; 99.9 5.5E-24 1.2E-28 225.9 35.2 374 33-558 15-388 (392)
13 PRK10054 putative transporter; 99.9 2.4E-24 5.1E-29 228.9 30.0 354 31-518 5-359 (395)
14 PRK11646 multidrug resistance 99.9 1.8E-23 3.9E-28 222.5 35.8 345 36-519 13-360 (400)
15 COG2814 AraJ Arabinose efflux 99.9 2.3E-23 5E-28 213.9 35.0 378 30-561 10-388 (394)
16 PRK14995 methyl viologen resis 99.9 1.1E-23 2.4E-28 230.4 33.2 398 32-517 5-412 (495)
17 PRK10642 proline/glycine betai 99.9 4.4E-23 9.6E-28 225.5 37.2 175 33-231 16-204 (490)
18 PRK10504 putative transporter; 99.9 3.4E-23 7.4E-28 225.3 35.1 404 32-519 9-416 (471)
19 PRK10077 xylE D-xylose transpo 99.9 1E-23 2.2E-28 229.8 31.0 399 64-565 50-463 (479)
20 TIGR00892 2A0113 monocarboxyla 99.9 8.8E-24 1.9E-28 228.7 28.6 371 58-553 43-415 (455)
21 PRK10489 enterobactin exporter 99.9 2.8E-23 6.2E-28 222.3 32.2 388 37-568 21-408 (417)
22 TIGR02332 HpaX 4-hydroxyphenyl 99.9 4E-23 8.6E-28 220.8 33.0 172 31-234 6-183 (412)
23 PRK11663 regulatory protein Uh 99.9 4.2E-23 9.1E-28 222.2 32.7 164 35-230 25-188 (434)
24 TIGR00903 2A0129 major facilit 99.9 5.1E-23 1.1E-27 216.1 32.3 351 54-555 11-361 (368)
25 TIGR00893 2A0114 d-galactonate 99.9 5E-23 1.1E-27 216.9 32.0 382 54-556 14-396 (399)
26 PRK09556 uhpT sugar phosphate 99.9 8.5E-24 1.8E-28 229.8 26.5 150 55-230 50-202 (467)
27 TIGR00900 2A0121 H+ Antiporter 99.9 4E-23 8.7E-28 215.8 30.6 358 38-517 4-362 (365)
28 PRK15402 multidrug efflux syst 99.9 1.7E-22 3.7E-27 215.5 35.8 341 48-517 28-369 (406)
29 PRK10406 alpha-ketoglutarate t 99.9 2.8E-22 6.1E-27 215.6 36.2 175 34-232 23-211 (432)
30 PRK09874 drug efflux system pr 99.9 9.3E-23 2E-27 217.3 31.4 380 33-560 14-399 (408)
31 TIGR00879 SP MFS transporter, 99.9 6E-23 1.3E-27 222.3 30.4 402 66-563 68-474 (481)
32 TIGR00891 2A0112 putative sial 99.9 1.2E-22 2.5E-27 215.8 32.0 175 27-233 6-182 (405)
33 PF07690 MFS_1: Major Facilita 99.9 6E-23 1.3E-27 213.6 28.8 350 39-509 2-352 (352)
34 TIGR00887 2A0109 phosphate:H+ 99.9 1.3E-22 2.9E-27 222.4 32.6 181 33-239 16-224 (502)
35 PRK09705 cynX putative cyanate 99.9 2E-22 4.4E-27 214.0 33.0 358 48-561 24-383 (393)
36 PLN00028 nitrate transmembrane 99.9 2.8E-22 6E-27 218.2 34.8 174 31-237 34-216 (476)
37 TIGR00890 2A0111 Oxalate/Forma 99.9 4.6E-23 1E-27 216.2 26.5 338 49-517 19-356 (377)
38 PRK10213 nepI ribonucleoside t 99.9 1.1E-21 2.3E-26 208.4 36.9 173 29-233 16-188 (394)
39 COG2271 UhpC Sugar phosphate p 99.9 4.8E-23 1E-27 208.7 24.6 401 35-563 27-438 (448)
40 TIGR00711 efflux_EmrB drug res 99.9 2E-22 4.3E-27 219.9 31.6 399 35-517 4-409 (485)
41 PRK12307 putative sialic acid 99.9 4.9E-22 1.1E-26 213.2 33.6 166 31-228 16-181 (426)
42 PRK11273 glpT sn-glycerol-3-ph 99.9 4.2E-22 9E-27 215.6 33.2 150 55-232 50-200 (452)
43 TIGR00899 2A0120 sugar efflux 99.9 8.2E-22 1.8E-26 207.4 33.2 365 40-556 4-371 (375)
44 PRK03893 putative sialic acid 99.9 3.4E-22 7.3E-27 218.9 31.3 170 30-231 17-186 (496)
45 cd06174 MFS The Major Facilita 99.9 8.8E-22 1.9E-26 204.1 32.3 347 37-556 3-349 (352)
46 TIGR00710 efflux_Bcr_CflA drug 99.9 2.1E-21 4.6E-26 204.9 35.0 352 33-514 5-357 (385)
47 TIGR00898 2A0119 cation transp 99.9 8.8E-22 1.9E-26 216.2 32.8 385 59-567 114-502 (505)
48 TIGR00897 2A0118 polyol permea 99.9 5E-21 1.1E-25 204.0 37.6 390 28-557 8-399 (402)
49 PRK10091 MFS transport protein 99.9 1.9E-21 4.1E-26 205.8 34.0 171 33-235 3-173 (382)
50 PRK03633 putative MFS family t 99.9 2.4E-21 5.2E-26 204.9 34.6 155 33-219 6-160 (381)
51 PRK09952 shikimate transporter 99.9 3.8E-21 8.3E-26 207.2 36.7 175 32-230 21-210 (438)
52 TIGR00894 2A0114euk Na(+)-depe 99.9 6.3E-22 1.4E-26 215.0 30.7 377 63-557 70-448 (465)
53 PRK03699 putative transporter; 99.9 3.5E-21 7.5E-26 204.7 35.4 350 30-517 4-354 (394)
54 TIGR00895 2A0115 benzoate tran 99.9 9.2E-22 2E-26 208.1 30.6 382 32-515 16-397 (398)
55 PRK11195 lysophospholipid tran 99.9 2.8E-21 6E-26 205.3 33.6 166 33-234 3-168 (393)
56 PRK11652 emrD multidrug resist 99.9 9E-21 2E-25 201.4 35.3 170 31-232 6-175 (394)
57 PRK15011 sugar efflux transpor 99.9 1.4E-20 3.1E-25 199.9 34.7 176 33-238 15-192 (393)
58 PRK15075 citrate-proton sympor 99.9 1.1E-20 2.3E-25 203.5 33.7 171 33-227 15-199 (434)
59 PRK15403 multidrug efflux syst 99.9 2.1E-20 4.6E-25 199.8 35.2 147 60-237 42-188 (413)
60 PRK09528 lacY galactoside perm 99.9 5.2E-21 1.1E-25 205.1 29.8 391 33-558 10-402 (420)
61 KOG0569 Permease of the major 99.9 3.3E-20 7.1E-25 196.3 35.0 395 72-569 63-464 (485)
62 PF00854 PTR2: POT family; In 99.9 8.2E-23 1.8E-27 215.3 15.3 367 100-502 1-370 (372)
63 PF05977 MFS_3: Transmembrane 99.9 2.8E-20 6.1E-25 202.1 35.4 359 33-518 10-369 (524)
64 PRK11043 putative transporter; 99.9 2.3E-20 5E-25 198.7 33.8 160 48-238 18-179 (401)
65 KOG0254 Predicted transporter 99.9 2.8E-20 6E-25 204.4 34.2 400 69-569 89-493 (513)
66 TIGR00902 2A0127 phenyl propri 99.9 3.9E-20 8.4E-25 195.8 33.7 363 36-553 7-373 (382)
67 PRK15034 nitrate/nitrite trans 99.9 6.3E-20 1.4E-24 195.0 35.0 382 33-561 34-456 (462)
68 TIGR00712 glpT glycerol-3-phos 99.9 8.1E-21 1.8E-25 204.7 28.7 151 56-234 49-200 (438)
69 TIGR00881 2A0104 phosphoglycer 99.9 2.6E-21 5.7E-26 203.0 23.4 151 54-235 15-166 (379)
70 TIGR00882 2A0105 oligosacchari 99.9 6.3E-20 1.4E-24 195.1 32.5 389 33-556 2-392 (396)
71 PRK10473 multidrug efflux syst 99.9 1.1E-19 2.5E-24 192.8 34.1 168 36-235 6-173 (392)
72 TIGR00889 2A0110 nucleoside tr 99.9 1.5E-19 3.2E-24 193.5 34.3 393 38-568 7-411 (418)
73 PRK11102 bicyclomycin/multidru 99.9 1.7E-19 3.7E-24 190.1 33.1 154 51-236 9-162 (377)
74 PRK10133 L-fucose transporter; 99.9 3.7E-19 7.9E-24 191.5 35.2 152 32-212 25-176 (438)
75 KOG1330 Sugar transporter/spin 99.9 2.5E-21 5.4E-26 198.0 17.3 180 29-240 29-209 (493)
76 TIGR00792 gph sugar (Glycoside 99.9 3.7E-19 8E-24 191.5 33.4 355 43-519 9-381 (437)
77 COG2223 NarK Nitrate/nitrite t 99.9 6.3E-20 1.4E-24 186.5 24.9 391 29-562 10-404 (417)
78 PRK08633 2-acyl-glycerophospho 99.9 3.4E-19 7.3E-24 214.7 35.6 361 33-516 9-382 (1146)
79 PRK06814 acylglycerophosphoeth 99.9 1.9E-19 4.1E-24 216.5 33.2 351 59-517 41-395 (1140)
80 TIGR00886 2A0108 nitrite extru 99.9 1.2E-19 2.6E-24 190.3 25.6 160 34-224 2-171 (366)
81 PRK11128 putative 3-phenylprop 99.9 1E-18 2.2E-23 184.9 32.6 335 43-517 14-354 (382)
82 PRK11010 ampG muropeptide tran 99.8 3.2E-18 6.9E-23 186.8 36.5 386 31-558 10-402 (491)
83 KOG2532 Permease of the major 99.8 1.3E-19 2.7E-24 193.8 24.6 377 63-559 67-447 (466)
84 TIGR00883 2A0106 metabolite-pr 99.8 1.5E-18 3.2E-23 183.2 29.5 343 55-518 14-375 (394)
85 TIGR00896 CynX cyanate transpo 99.8 1.3E-18 2.8E-23 182.1 25.3 324 56-519 22-349 (355)
86 TIGR00885 fucP L-fucose:H+ sym 99.8 2.4E-17 5.2E-22 175.9 33.8 169 35-232 5-199 (410)
87 TIGR00901 2A0125 AmpG-related 99.8 1.7E-17 3.6E-22 173.8 29.3 157 53-238 7-176 (356)
88 PRK11902 ampG muropeptide tran 99.8 1.8E-16 3.8E-21 169.0 35.7 163 43-235 9-177 (402)
89 PRK09669 putative symporter Ya 99.8 2.4E-16 5.2E-21 170.3 34.7 356 40-520 16-390 (444)
90 TIGR01301 GPH_sucrose GPH fami 99.8 2.1E-16 4.6E-21 169.2 33.4 438 33-562 4-474 (477)
91 PRK10429 melibiose:sodium symp 99.8 5.9E-16 1.3E-20 168.5 36.4 363 40-519 13-394 (473)
92 PRK09848 glucuronide transport 99.8 1.2E-15 2.7E-20 164.9 37.5 362 38-520 13-390 (448)
93 KOG0253 Synaptic vesicle trans 99.8 6.8E-17 1.5E-21 160.0 24.4 420 45-566 89-526 (528)
94 KOG0255 Synaptic vesicle trans 99.8 6.1E-16 1.3E-20 170.6 34.8 140 62-235 111-250 (521)
95 PTZ00207 hypothetical protein; 99.8 3.1E-15 6.7E-20 163.5 37.8 168 31-229 26-194 (591)
96 PF00083 Sugar_tr: Sugar (and 99.8 1.5E-22 3.3E-27 218.8 -19.3 389 70-569 47-446 (451)
97 KOG2615 Permease of the major 99.8 2.7E-16 5.9E-21 157.0 25.3 123 60-214 59-181 (451)
98 PF06609 TRI12: Fungal trichot 99.8 1.7E-15 3.7E-20 164.5 32.4 149 54-235 64-212 (599)
99 PF03825 Nuc_H_symport: Nucleo 99.7 4.2E-15 9.1E-20 157.1 34.0 378 43-561 12-397 (400)
100 KOG3764 Vesicular amine transp 99.7 1.6E-16 3.5E-21 159.5 20.7 149 63-241 100-248 (464)
101 TIGR00806 rfc RFC reduced fola 99.7 1.6E-15 3.5E-20 158.6 28.7 156 52-240 44-203 (511)
102 TIGR00805 oat sodium-independe 99.7 3.6E-16 7.9E-21 174.9 24.7 203 32-241 31-282 (633)
103 KOG2504 Monocarboxylate transp 99.7 5.9E-16 1.3E-20 167.7 25.0 420 35-559 44-476 (509)
104 PRK11462 putative transporter; 99.7 1.1E-14 2.4E-19 157.7 35.1 171 40-233 16-197 (460)
105 PF01306 LacY_symp: LacY proto 99.7 1.3E-15 2.8E-20 158.6 26.1 390 33-563 7-404 (412)
106 TIGR00788 fbt folate/biopterin 99.7 5.4E-15 1.2E-19 160.3 31.9 380 35-519 28-414 (468)
107 TIGR02718 sider_RhtX_FptX side 99.7 2.2E-14 4.8E-19 152.2 35.2 178 35-240 3-184 (390)
108 COG0738 FucP Fucose permease [ 99.7 2.7E-15 5.8E-20 151.9 25.3 151 36-214 15-165 (422)
109 PF13347 MFS_2: MFS/sugar tran 99.7 1.5E-15 3.2E-20 163.3 23.3 356 43-520 11-386 (428)
110 KOG0252 Inorganic phosphate tr 99.7 5.6E-17 1.2E-21 165.5 11.3 434 30-569 35-507 (538)
111 KOG2533 Permease of the major 99.7 1.4E-14 3E-19 155.7 27.5 150 61-241 73-228 (495)
112 COG2807 CynX Cyanate permease 99.7 7.4E-14 1.6E-18 139.5 29.9 327 54-519 32-360 (395)
113 COG2211 MelB Na+/melibiose sym 99.7 5.7E-13 1.2E-17 140.2 36.0 363 36-519 15-397 (467)
114 PF11700 ATG22: Vacuole efflux 99.6 9E-12 1.9E-16 134.4 34.7 399 33-558 4-467 (477)
115 COG2271 UhpC Sugar phosphate p 99.5 1.9E-13 4.1E-18 139.3 12.9 177 33-237 252-431 (448)
116 PRK10642 proline/glycine betai 99.5 1.4E-12 2.9E-17 142.9 19.4 180 31-239 248-429 (490)
117 PRK15011 sugar efflux transpor 99.5 2.1E-12 4.6E-17 137.2 19.9 174 33-238 216-389 (393)
118 PF03209 PUCC: PUCC protein; 99.5 1.5E-10 3.3E-15 118.8 31.2 348 61-520 7-365 (403)
119 PRK09556 uhpT sugar phosphate 99.4 2.3E-12 4.9E-17 140.2 17.5 176 33-237 258-446 (467)
120 KOG4686 Predicted sugar transp 99.4 2.3E-12 5E-17 123.8 14.6 378 53-560 63-444 (459)
121 PRK09952 shikimate transporter 99.4 7.8E-12 1.7E-16 134.8 17.7 181 32-239 249-432 (438)
122 PRK03699 putative transporter; 99.4 7.9E-12 1.7E-16 132.9 17.5 170 33-234 205-374 (394)
123 TIGR00899 2A0120 sugar efflux 99.4 1.2E-11 2.6E-16 130.1 18.6 165 42-238 208-372 (375)
124 TIGR00890 2A0111 Oxalate/Forma 99.4 6.2E-12 1.3E-16 131.7 15.9 169 34-232 206-374 (377)
125 PRK05122 major facilitator sup 99.4 1.1E-11 2.3E-16 132.0 17.8 169 44-246 227-395 (399)
126 KOG2563 Permease of the major 99.4 8E-11 1.7E-15 121.1 23.1 387 54-569 65-460 (480)
127 PRK11551 putative 3-hydroxyphe 99.4 8.8E-12 1.9E-16 132.8 16.9 170 36-237 223-393 (406)
128 TIGR01299 synapt_SV2 synaptic 99.4 8.6E-12 1.9E-16 140.7 17.4 134 74-239 600-733 (742)
129 PRK09705 cynX putative cyanate 99.4 3E-11 6.6E-16 128.4 20.4 178 33-242 205-383 (393)
130 cd06174 MFS The Major Facilita 99.4 2.2E-11 4.8E-16 126.0 18.4 171 35-236 177-348 (352)
131 TIGR00889 2A0110 nucleoside tr 99.4 9.2E-12 2E-16 133.4 15.3 175 36-238 211-400 (418)
132 TIGR00883 2A0106 metabolite-pr 99.3 8.3E-12 1.8E-16 131.6 14.1 169 32-228 218-389 (394)
133 PRK03545 putative arabinose tr 99.3 7.5E-11 1.6E-15 125.1 20.0 175 35-241 207-381 (390)
134 TIGR00893 2A0114 d-galactonate 99.3 4.7E-11 1E-15 125.6 18.1 179 33-236 215-395 (399)
135 KOG2325 Predicted transporter/ 99.3 6.6E-11 1.4E-15 125.0 17.9 191 23-240 24-229 (488)
136 TIGR00880 2_A_01_02 Multidrug 99.3 1E-11 2.3E-16 110.3 10.3 134 74-238 3-136 (141)
137 TIGR00902 2A0127 phenyl propri 99.3 8.1E-11 1.8E-15 124.5 18.8 169 33-235 205-374 (382)
138 PRK09528 lacY galactoside perm 99.3 1.4E-11 3.1E-16 132.0 12.7 159 47-236 237-399 (420)
139 PRK09874 drug efflux system pr 99.3 7.2E-11 1.6E-15 125.8 17.5 164 44-238 230-396 (408)
140 PRK11663 regulatory protein Uh 99.3 7E-11 1.5E-15 127.3 17.0 178 33-238 243-422 (434)
141 COG2270 Permeases of the major 99.3 6.9E-10 1.5E-14 113.7 23.0 343 53-520 35-405 (438)
142 PRK11273 glpT sn-glycerol-3-ph 99.3 6.3E-11 1.4E-15 128.3 16.4 176 33-237 253-432 (452)
143 PRK03633 putative MFS family t 99.3 1.3E-10 2.7E-15 123.0 18.2 154 47-235 214-367 (381)
144 PRK10489 enterobactin exporter 99.3 7.5E-11 1.6E-15 126.3 16.2 159 49-238 239-397 (417)
145 PRK12382 putative transporter; 99.3 9.6E-11 2.1E-15 124.3 16.5 160 45-238 228-387 (392)
146 TIGR01272 gluP glucose/galacto 99.3 6.2E-10 1.3E-14 114.2 21.6 78 146-229 9-102 (310)
147 TIGR00891 2A0112 putative sial 99.2 1E-10 2.3E-15 124.0 15.6 160 35-224 240-400 (405)
148 TIGR00892 2A0113 monocarboxyla 99.2 7.9E-11 1.7E-15 127.7 14.9 172 33-235 241-416 (455)
149 TIGR00897 2A0118 polyol permea 99.2 2.8E-10 6.1E-15 121.3 18.9 176 33-237 222-398 (402)
150 PRK03893 putative sialic acid 99.2 1.6E-10 3.5E-15 126.6 17.1 149 51-228 293-441 (496)
151 PRK11010 ampG muropeptide tran 99.2 5.4E-10 1.2E-14 122.2 18.9 180 36-242 225-405 (491)
152 TIGR01272 gluP glucose/galacto 99.2 4.9E-10 1.1E-14 115.0 17.2 162 33-228 140-303 (310)
153 COG2814 AraJ Arabinose efflux 99.2 6.6E-10 1.4E-14 114.9 17.8 178 33-242 211-388 (394)
154 KOG2816 Predicted transporter 99.2 6.4E-09 1.4E-13 111.3 26.0 359 35-519 23-393 (463)
155 PRK15075 citrate-proton sympor 99.2 3.1E-10 6.7E-15 122.3 15.9 153 39-219 244-398 (434)
156 COG2223 NarK Nitrate/nitrite t 99.2 4.1E-10 8.9E-15 115.3 14.9 185 32-241 217-402 (417)
157 PF11700 ATG22: Vacuole efflux 99.2 9.9E-10 2.1E-14 118.6 18.5 185 31-240 279-468 (477)
158 PRK10406 alpha-ketoglutarate t 99.2 8.6E-10 1.9E-14 118.8 17.2 175 35-238 244-422 (432)
159 KOG4686 Predicted sugar transp 99.1 7E-10 1.5E-14 106.9 14.1 167 29-228 260-430 (459)
160 TIGR00879 SP MFS transporter, 99.1 7.4E-10 1.6E-14 119.8 16.4 168 52-240 303-470 (481)
161 TIGR00900 2A0121 H+ Antiporter 99.1 2.4E-10 5.1E-15 119.2 12.0 154 34-217 211-365 (365)
162 TIGR00712 glpT glycerol-3-phos 99.1 6.9E-10 1.5E-14 119.7 15.9 177 33-238 251-431 (438)
163 KOG3626 Organic anion transpor 99.1 9.5E-09 2.1E-13 113.1 24.4 204 35-245 98-348 (735)
164 PRK11128 putative 3-phenylprop 99.1 1.8E-09 3.9E-14 114.2 18.1 167 33-233 205-372 (382)
165 PLN00028 nitrate transmembrane 99.1 1.2E-09 2.6E-14 119.0 16.8 174 34-240 253-433 (476)
166 TIGR00881 2A0104 phosphoglycer 99.1 6.4E-10 1.4E-14 116.5 13.7 162 33-222 216-379 (379)
167 TIGR00894 2A0114euk Na(+)-depe 99.1 1.4E-09 3E-14 118.3 16.5 178 32-238 260-448 (465)
168 PRK10091 MFS transport protein 99.1 2.8E-09 6E-14 112.8 18.2 172 35-237 201-373 (382)
169 TIGR02332 HpaX 4-hydroxyphenyl 99.1 1.5E-09 3.3E-14 116.0 16.0 165 33-228 242-409 (412)
170 PRK10504 putative transporter; 99.1 2.3E-09 4.9E-14 116.8 17.4 157 34-218 262-418 (471)
171 PF03092 BT1: BT1 family; Int 99.1 4.5E-08 9.7E-13 105.1 27.0 161 56-241 12-176 (433)
172 TIGR00882 2A0105 oligosacchari 99.1 1.4E-09 3E-14 115.7 15.4 169 35-234 217-389 (396)
173 PRK15402 multidrug efflux syst 99.1 6.8E-09 1.5E-13 110.7 20.4 170 34-230 216-385 (406)
174 TIGR00895 2A0115 benzoate tran 99.1 1.4E-09 3.1E-14 114.8 14.4 147 34-212 251-397 (398)
175 PRK12307 putative sialic acid 99.1 4.2E-09 9E-14 113.0 18.1 150 46-225 244-393 (426)
176 PF03137 OATP: Organic Anion T 99.1 1.7E-11 3.7E-16 134.1 -0.6 199 40-246 10-256 (539)
177 PF05631 DUF791: Protein of un 99.1 1.3E-07 2.8E-12 96.0 26.9 152 59-238 59-214 (354)
178 TIGR00896 CynX cyanate transpo 99.1 4.1E-09 8.9E-14 110.2 17.0 156 33-219 197-353 (355)
179 TIGR02718 sider_RhtX_FptX side 99.1 5.3E-09 1.1E-13 111.0 17.8 175 35-234 210-385 (390)
180 TIGR00792 gph sugar (Glycoside 99.0 3.2E-09 6.9E-14 114.3 14.4 162 33-219 222-384 (437)
181 PRK10054 putative transporter; 99.0 3.6E-09 7.9E-14 112.5 14.3 173 34-237 207-381 (395)
182 PRK10133 L-fucose transporter; 99.0 6.6E-09 1.4E-13 112.0 16.4 164 36-233 261-426 (438)
183 TIGR00887 2A0109 phosphate:H+ 99.0 6.1E-09 1.3E-13 114.4 16.0 169 39-235 294-484 (502)
184 PRK11902 ampG muropeptide tran 99.0 1.8E-08 3.8E-13 107.4 18.7 158 54-242 230-392 (402)
185 PRK10077 xylE D-xylose transpo 99.0 1.9E-08 4.1E-13 109.7 18.9 159 53-239 291-456 (479)
186 PRK10213 nepI ribonucleoside t 99.0 2.8E-08 6.1E-13 105.6 19.7 166 33-230 216-381 (394)
187 TIGR00711 efflux_EmrB drug res 99.0 5.1E-09 1.1E-13 114.3 13.7 156 33-215 255-410 (485)
188 PF05977 MFS_3: Transmembrane 99.0 1.3E-08 2.9E-13 111.2 16.6 165 42-237 227-391 (524)
189 PRK14995 methyl viologen resis 99.0 8E-09 1.7E-13 113.3 15.0 154 33-214 259-412 (495)
190 TIGR00710 efflux_Bcr_CflA drug 99.0 3.4E-08 7.4E-13 104.0 19.0 161 35-223 208-369 (385)
191 COG2807 CynX Cyanate permease 99.0 4E-08 8.6E-13 98.9 17.9 164 34-228 209-373 (395)
192 COG2270 Permeases of the major 98.9 1.5E-08 3.3E-13 104.0 13.6 174 34-238 253-427 (438)
193 PRK11646 multidrug resistance 98.9 2.9E-08 6.4E-13 105.7 16.2 152 51-233 226-381 (400)
194 PRK08633 2-acyl-glycerophospho 98.9 2.4E-08 5.1E-13 120.9 17.2 163 34-227 233-397 (1146)
195 PF13347 MFS_2: MFS/sugar tran 98.9 2.7E-08 5.8E-13 107.1 15.7 163 33-219 225-388 (428)
196 PRK15034 nitrate/nitrite trans 98.9 6.2E-08 1.3E-12 103.6 18.0 185 33-238 252-452 (462)
197 KOG0253 Synaptic vesicle trans 98.9 2.5E-08 5.5E-13 99.9 13.7 169 34-235 327-514 (528)
198 PRK06814 acylglycerophosphoeth 98.9 2.4E-08 5.2E-13 120.7 16.1 183 33-227 225-409 (1140)
199 KOG3098 Uncharacterized conser 98.9 3.1E-06 6.8E-11 89.7 29.7 100 75-206 56-155 (461)
200 TIGR00903 2A0129 major facilit 98.9 7.4E-08 1.6E-12 101.4 17.7 167 33-237 192-362 (368)
201 PF07690 MFS_1: Major Facilita 98.9 6.9E-09 1.5E-13 107.7 9.3 143 36-206 209-352 (352)
202 PRK11195 lysophospholipid tran 98.9 9.5E-08 2.1E-12 101.6 17.9 158 46-235 218-375 (393)
203 PRK09848 glucuronide transport 98.8 2.4E-08 5.2E-13 108.1 13.3 163 33-218 228-391 (448)
204 KOG2504 Monocarboxylate transp 98.8 3.4E-08 7.4E-13 107.5 14.3 176 33-240 298-476 (509)
205 KOG2532 Permease of the major 98.8 2.7E-08 5.9E-13 107.0 13.2 179 31-239 256-446 (466)
206 TIGR00901 2A0125 AmpG-related 98.8 5.5E-08 1.2E-12 101.7 14.6 145 34-199 210-355 (356)
207 TIGR00898 2A0119 cation transp 98.8 4.3E-08 9.4E-13 107.7 13.7 133 75-238 361-493 (505)
208 PRK11043 putative transporter; 98.8 5.5E-07 1.2E-11 95.8 20.4 150 43-220 213-362 (401)
209 KOG0569 Permease of the major 98.8 6.8E-08 1.5E-12 103.1 12.9 193 30-245 266-459 (485)
210 PRK10473 multidrug efflux syst 98.7 3.3E-07 7.2E-12 97.2 17.3 70 50-120 220-289 (392)
211 PRK11102 bicyclomycin/multidru 98.7 7E-07 1.5E-11 94.0 19.4 148 35-210 196-344 (377)
212 KOG1330 Sugar transporter/spin 98.7 7.5E-09 1.6E-13 107.1 4.0 149 372-567 69-217 (493)
213 PRK10429 melibiose:sodium symp 98.7 1.5E-07 3.2E-12 102.7 14.3 165 33-218 231-396 (473)
214 KOG3762 Predicted transporter 98.7 1.4E-06 3.1E-11 91.8 19.2 138 375-560 410-548 (618)
215 TIGR00886 2A0108 nitrite extru 98.7 1.7E-07 3.7E-12 98.1 12.4 140 34-201 226-365 (366)
216 PRK09669 putative symporter Ya 98.6 2.3E-07 4.9E-12 100.3 13.1 160 35-218 231-391 (444)
217 PF01306 LacY_symp: LacY proto 98.6 3.6E-07 7.8E-12 95.7 13.7 178 32-240 219-401 (412)
218 PF03825 Nuc_H_symport: Nucleo 98.6 1.3E-06 2.9E-11 92.6 17.9 161 34-220 208-369 (400)
219 TIGR00880 2_A_01_02 Multidrug 98.6 1.8E-06 3.9E-11 76.3 15.7 134 377-558 4-137 (141)
220 TIGR00885 fucP L-fucose:H+ sym 98.6 8.3E-07 1.8E-11 94.9 15.8 163 35-231 234-403 (410)
221 PRK15403 multidrug efflux syst 98.6 2.4E-06 5.3E-11 91.4 18.5 139 376-562 56-194 (413)
222 PRK11652 emrD multidrug resist 98.5 4.6E-06 1E-10 88.5 19.5 139 53-220 227-365 (394)
223 KOG4332 Predicted sugar transp 98.5 2.8E-06 6E-11 81.8 14.1 97 57-179 60-157 (454)
224 PF06813 Nodulin-like: Nodulin 98.5 8.9E-06 1.9E-10 79.9 18.0 159 54-238 22-180 (250)
225 COG2211 MelB Na+/melibiose sym 98.4 2.4E-06 5.1E-11 90.6 13.7 159 36-217 239-398 (467)
226 KOG3764 Vesicular amine transp 98.4 2.2E-06 4.9E-11 87.3 10.3 147 372-566 107-254 (464)
227 PF03209 PUCC: PUCC protein; 98.3 1.3E-05 2.8E-10 82.9 15.7 165 45-236 220-394 (403)
228 TIGR00924 yjdL_sub1_fam amino 98.3 7.9E-06 1.7E-10 89.1 14.4 184 35-239 274-467 (475)
229 PF01770 Folate_carrier: Reduc 98.3 0.00019 4.2E-09 75.1 23.3 156 53-240 23-182 (412)
230 PRK11462 putative transporter; 98.3 1.6E-05 3.4E-10 86.4 15.5 153 42-218 237-390 (460)
231 COG0477 ProP Permeases of the 98.3 2.2E-05 4.8E-10 78.4 15.4 145 54-228 23-173 (338)
232 KOG0637 Sucrose transporter an 98.3 1.3E-05 2.9E-10 83.1 13.6 167 33-212 32-202 (498)
233 COG0738 FucP Fucose permease [ 98.2 1.9E-05 4.2E-10 81.0 14.4 154 36-223 239-392 (422)
234 KOG2533 Permease of the major 98.1 5.6E-06 1.2E-10 89.5 8.2 165 33-226 273-442 (495)
235 PF02487 CLN3: CLN3 protein; 98.1 0.0019 4.1E-08 67.7 25.8 61 455-515 334-394 (402)
236 PRK15462 dipeptide/tripeptide 98.1 4E-05 8.6E-10 83.1 13.8 139 376-561 50-191 (493)
237 TIGR01301 GPH_sucrose GPH fami 98.1 0.00013 2.9E-09 78.7 17.5 207 27-242 252-473 (477)
238 PRK10207 dipeptide/tripeptide 98.0 4.4E-05 9.6E-10 83.5 13.0 109 378-517 57-168 (489)
239 TIGR00788 fbt folate/biopterin 98.0 1.4E-05 3E-10 87.0 8.3 135 61-217 280-415 (468)
240 KOG3762 Predicted transporter 98.0 2.2E-05 4.8E-10 83.0 9.1 173 38-242 376-549 (618)
241 TIGR00769 AAA ADP/ATP carrier 98.0 0.0061 1.3E-07 65.7 27.8 166 30-213 4-189 (472)
242 PF12832 MFS_1_like: MFS_1 lik 98.0 4.8E-05 1E-09 60.4 8.7 65 43-109 10-74 (77)
243 PRK09584 tppB putative tripept 98.0 0.00014 2.9E-09 80.0 15.2 145 44-210 283-439 (500)
244 PF00083 Sugar_tr: Sugar (and 98.0 1.1E-07 2.4E-12 102.8 -9.3 186 34-243 253-439 (451)
245 PTZ00207 hypothetical protein; 97.9 0.00036 7.8E-09 77.2 17.5 130 387-560 77-206 (591)
246 PF06609 TRI12: Fungal trichot 97.9 0.00021 4.5E-09 78.7 14.9 139 373-560 80-218 (599)
247 KOG0252 Inorganic phosphate tr 97.9 2.8E-05 6.2E-10 80.8 7.3 181 33-240 304-498 (538)
248 TIGR00805 oat sodium-independe 97.8 9.2E-05 2E-09 83.5 10.7 135 373-518 70-234 (633)
249 KOG2615 Permease of the major 97.8 7.6E-05 1.6E-09 75.9 8.3 112 373-517 70-181 (451)
250 KOG0254 Predicted transporter 97.8 0.00042 9.1E-09 76.4 14.8 151 31-200 292-442 (513)
251 TIGR00806 rfc RFC reduced fola 97.7 0.0012 2.5E-08 70.4 16.8 109 374-515 65-173 (511)
252 PF06963 FPN1: Ferroportin1 (F 97.7 0.033 7.1E-07 59.4 26.7 59 454-512 354-412 (432)
253 KOG3574 Acetyl-CoA transporter 97.6 0.032 7E-07 57.1 24.0 159 28-209 26-189 (510)
254 KOG2325 Predicted transporter/ 97.5 0.0012 2.5E-08 70.6 13.1 161 374-566 74-236 (488)
255 PF05978 UNC-93: Ion channel r 97.4 0.0049 1.1E-07 56.1 13.3 111 67-209 35-145 (156)
256 KOG0255 Synaptic vesicle trans 97.3 0.0023 4.9E-08 70.7 13.4 129 375-554 122-250 (521)
257 KOG2563 Permease of the major 97.2 0.0021 4.5E-08 67.2 10.7 186 33-245 266-455 (480)
258 KOG2816 Predicted transporter 97.0 0.0031 6.7E-08 68.0 9.4 153 29-212 236-389 (463)
259 PRK03612 spermidine synthase; 96.9 0.048 1E-06 60.0 18.2 159 53-239 34-197 (521)
260 PF06779 DUF1228: Protein of u 96.8 0.013 2.9E-07 47.0 9.2 73 47-121 6-78 (85)
261 COG3104 PTR2 Dipeptide/tripept 96.8 0.0024 5.2E-08 67.8 6.2 121 413-568 93-215 (498)
262 PF06813 Nodulin-like: Nodulin 96.7 0.029 6.2E-07 55.3 12.8 92 410-516 64-155 (250)
263 PF03137 OATP: Organic Anion T 96.6 0.00032 7E-09 77.2 -1.4 135 373-518 40-203 (539)
264 PF00854 PTR2: POT family; In 95.9 0.063 1.4E-06 56.5 11.1 125 413-565 2-129 (372)
265 PF05978 UNC-93: Ion channel r 95.8 0.15 3.3E-06 46.3 11.6 62 454-515 87-148 (156)
266 PF06963 FPN1: Ferroportin1 (F 95.7 0.3 6.5E-06 52.2 15.3 146 43-210 268-413 (432)
267 KOG3626 Organic anion transpor 95.6 0.087 1.9E-06 59.1 11.3 136 373-519 134-300 (735)
268 TIGR00926 2A1704 Peptide:H+ sy 95.0 1.6 3.5E-05 49.5 18.9 317 64-438 15-341 (654)
269 PF05631 DUF791: Protein of un 94.7 4.6 9.9E-05 41.7 19.7 110 374-516 72-187 (354)
270 PF03092 BT1: BT1 family; Int 94.6 0.48 1E-05 51.0 13.1 90 455-561 85-177 (433)
271 TIGR00769 AAA ADP/ATP carrier 94.4 4.5 9.7E-05 43.9 19.8 59 459-517 131-190 (472)
272 PF02487 CLN3: CLN3 protein; 94.0 0.31 6.7E-06 51.3 9.7 140 38-211 252-393 (402)
273 KOG3098 Uncharacterized conser 93.0 2.1 4.5E-05 46.0 14.0 115 79-206 289-405 (461)
274 KOG4332 Predicted sugar transp 92.8 1.1 2.3E-05 44.1 10.4 141 71-235 284-426 (454)
275 KOG3880 Predicted small molecu 92.4 1.8 4E-05 43.4 11.5 59 455-513 341-399 (409)
276 PF03219 TLC: TLC ATP/ADP tran 91.8 23 0.00049 38.8 24.2 170 29-214 20-205 (491)
277 PF07672 MFS_Mycoplasma: Mycop 91.5 2.4 5.1E-05 41.7 11.2 59 187-245 4-67 (267)
278 TIGR00939 2a57 Equilibrative N 90.9 2.2 4.8E-05 45.9 11.5 57 146-208 371-427 (437)
279 TIGR00939 2a57 Equilibrative N 90.9 26 0.00056 37.7 30.5 59 455-513 371-429 (437)
280 KOG0637 Sucrose transporter an 88.8 0.97 2.1E-05 47.9 6.4 167 328-514 32-201 (498)
281 KOG3810 Micronutrient transpor 87.2 8 0.00017 39.8 11.5 95 454-558 324-420 (433)
282 KOG3097 Predicted membrane pro 85.7 13 0.00029 37.9 12.1 117 29-178 25-141 (390)
283 PF13000 Acatn: Acetyl-coenzym 85.7 59 0.0013 35.4 22.5 62 458-519 407-468 (544)
284 COG0477 ProP Permeases of the 85.0 9 0.00019 37.4 11.1 62 456-517 94-157 (338)
285 PF01770 Folate_carrier: Reduc 84.6 34 0.00073 36.4 15.2 61 455-516 93-153 (412)
286 PF03219 TLC: TLC ATP/ADP tran 84.4 68 0.0015 35.1 19.5 43 475-517 163-205 (491)
287 KOG1479 Nucleoside transporter 83.1 67 0.0015 34.0 21.8 57 455-511 342-398 (406)
288 PF07857 DUF1632: CEO family ( 82.8 3.6 7.8E-05 40.5 6.7 30 486-515 73-102 (254)
289 PF01733 Nucleoside_tran: Nucl 80.7 0.51 1.1E-05 48.3 -0.0 116 73-207 186-302 (309)
290 COG3202 ATP/ADP translocase [E 80.4 92 0.002 33.8 27.8 170 30-214 24-209 (509)
291 KOG1479 Nucleoside transporter 71.7 7.4 0.00016 41.0 5.6 129 54-206 264-396 (406)
292 COG5336 Uncharacterized protei 67.2 20 0.00043 30.0 5.9 39 76-114 49-87 (116)
293 KOG3574 Acetyl-CoA transporter 64.0 1E+02 0.0022 32.5 11.7 95 462-560 139-237 (510)
294 COG3202 ATP/ADP translocase [E 61.2 2.5E+02 0.0054 30.6 18.1 61 457-517 148-209 (509)
295 KOG1237 H+/oligopeptide sympor 59.9 92 0.002 34.8 11.7 94 457-566 153-252 (571)
296 KOG3810 Micronutrient transpor 58.5 1.8E+02 0.0038 30.4 12.1 99 70-197 272-370 (433)
297 PRK03612 spermidine synthase; 58.5 2.1E+02 0.0046 31.5 14.2 53 464-517 118-170 (521)
298 PF13000 Acatn: Acetyl-coenzym 58.1 56 0.0012 35.5 9.0 36 480-515 142-177 (544)
299 PF09527 ATPase_gene1: Putativ 49.7 68 0.0015 23.2 5.9 34 76-109 7-40 (55)
300 PF12832 MFS_1_like: MFS_1 lik 49.6 24 0.00053 27.7 3.7 30 372-401 36-65 (77)
301 PF00558 Vpu: Vpu protein; In 48.1 28 0.00061 27.6 3.7 46 550-595 18-63 (81)
302 KOG4830 Predicted sugar transp 47.7 30 0.00066 34.1 4.6 60 42-103 26-94 (412)
303 COG5336 Uncharacterized protei 38.1 1.2E+02 0.0027 25.4 6.1 35 485-519 35-69 (116)
304 COG4262 Predicted spermidine s 37.9 5E+02 0.011 27.2 13.1 97 54-174 31-132 (508)
305 PF06679 DUF1180: Protein of u 37.8 24 0.00053 32.1 2.2 27 537-563 94-120 (163)
306 PF06779 DUF1228: Protein of u 34.6 1.1E+02 0.0025 24.5 5.4 69 157-234 4-72 (85)
307 PF06645 SPC12: Microsomal sig 31.6 93 0.002 24.4 4.4 41 192-235 11-51 (76)
308 PRK11588 hypothetical protein; 29.9 4.2E+02 0.0092 29.0 10.4 17 388-404 129-145 (506)
309 PF06912 DUF1275: Protein of u 28.9 5E+02 0.011 24.5 14.7 40 76-116 53-95 (209)
310 TIGR02230 ATPase_gene1 F0F1-AT 27.6 2E+02 0.0044 23.9 5.8 23 83-105 56-78 (100)
311 PF07672 MFS_Mycoplasma: Mycop 27.0 4.5E+02 0.0097 26.2 9.1 28 77-104 149-176 (267)
312 PRK10263 DNA translocase FtsK; 26.9 2.6E+02 0.0055 34.4 8.6 13 84-96 63-75 (1355)
313 PF06123 CreD: Inner membrane 26.5 8.3E+02 0.018 26.2 11.8 20 415-434 298-317 (430)
314 PF01102 Glycophorin_A: Glycop 26.2 81 0.0018 27.3 3.4 7 560-566 89-95 (122)
315 KOG4112 Signal peptidase subun 24.3 94 0.002 25.3 3.2 31 188-219 22-52 (101)
316 COG3619 Predicted membrane pro 21.3 7.6E+02 0.016 23.9 14.9 29 67-95 53-81 (226)
317 TIGR01667 YCCS_YHJK integral m 21.1 1.2E+03 0.027 26.7 12.7 47 411-477 56-102 (701)
318 PF12273 RCR: Chitin synthesis 20.9 46 0.001 29.1 1.0 12 219-230 1-12 (130)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-47 Score=415.23 Aligned_cols=529 Identities=47% Similarity=0.796 Sum_probs=476.2
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHH
Q 007604 28 KRGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAF 107 (596)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~ 107 (596)
+++.|+++..++..+.++++++|++..++..|+++.+|.+...+...++.+.......++++++++|.++||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCC-CCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhh
Q 007604 108 FFYLMGMIVLALSVSLSGLKPPPC-NDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAH 186 (596)
Q Consensus 108 ~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 186 (596)
++..+|..++.++..++.+.+..| .+.++..|..++..+...++.++.++++|.|+..|+..++.+||+++..++++.+
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999999888888888776 4444556888888899999999999999999999999999999999877777778
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHh
Q 007604 187 KLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRK 266 (596)
Q Consensus 187 r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (596)
+.+.|+|+++..+.|..++..+..|+.+..||.+.|.++.+..++++++++...+.+++++|.++|...+.+++..+.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCC-------CCCcccccchhhhhhhhHHhHHHHHHH
Q 007604 267 RNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGA-------TNPWILCSVSQVEETTQMLAMIPILVA 339 (596)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~l~~~~~~~~ 339 (596)
++...+.++... ..........+.++.++++|+++.+... .++|+.++.+++++.|.+++.++++..
T Consensus 272 ~~~~~~~~~~~~------~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~ 345 (571)
T KOG1237|consen 272 RKAVVSLDPEEL------YYDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLT 345 (571)
T ss_pred HhccCCCcchhc------cccccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHH
Confidence 888776654333 1111112233346778899998877432 367999999999999999999999999
Q ss_pred hhhhhhhhhcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHH
Q 007604 340 TFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGL 419 (596)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~ 419 (596)
...+++++.|+.+.+..|...|++++++.+.+|++.+..+..+..++..|+.+++..|+.||..+++.+++++.++++|+
T Consensus 346 ~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~ 425 (571)
T KOG1237|consen 346 TIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGL 425 (571)
T ss_pred HHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccc
Confidence 99999999999999999999999999966999999999999999999999999999999999988776789999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHH
Q 007604 420 VIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMT 499 (596)
Q Consensus 420 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 499 (596)
++..+++...+..+.+|.+...+ +.+..++++++|++++++++|++|.+..++..|+.++++|++||+.+++++.+
T Consensus 426 ~~si~sm~~aa~vE~krl~~~~~----~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~ 501 (571)
T KOG1237|consen 426 VLSILSMAVAGIVEAKRLKTAVS----LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLL 501 (571)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhh----ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHH
Confidence 99999999999999988776543 22234689999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHhHHHhhhhccccccCCCCccc-cCCcccchhHHHHHHHHHHHHHHHHHHHHhhccccccCC
Q 007604 500 TLGVGNFLSSFLLSTVSDITKRHGHKGWIL-NNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKAEV 568 (596)
Q Consensus 500 ~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~ 568 (596)
+.++|+.++.++++.+...++. +.+|++ +++|.+++..+||+++.+..+....+.++.++|+.+..+
T Consensus 502 t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 502 TVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 9999999999999998765533 568999 999999999999999999999999999999988776654
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-41 Score=345.75 Aligned_cols=461 Identities=19% Similarity=0.311 Sum_probs=354.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC----CChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHH
Q 007604 29 RGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLH----HGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFV 104 (596)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~ 104 (596)
-+++|.++.++.++++|+++|||+...+..|+..+++ +|++++.-+.++|....++.++++||++||++|+|+++.
T Consensus 17 f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 17 FGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 3478999999999999999999999999999999888 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhh
Q 007604 105 IAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEK 184 (596)
Q Consensus 105 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 184 (596)
.+.++.++|.++++.++. .....++++..++++|.|++.|+..++++|++|++++
T Consensus 97 lGail~~iGh~~L~~~~~----------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp--- 151 (498)
T COG3104 97 LGAILMAIGHLVLAISSV----------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP--- 151 (498)
T ss_pred HHHHHHHHHHHHHhcccc----------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc---
Confidence 999999999999987630 1566799999999999999999999999999999986
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCC--CCChhH--H----H
Q 007604 185 AHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKP--AGSPFT--R----M 256 (596)
Q Consensus 185 ~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~----~ 256 (596)
||..+++++|++.|+|+.++|++.+++.+.+||+..|.++++...++++.++++++....+.. +..|.. . .
T Consensus 152 -rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 230 (498)
T COG3104 152 -RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVL 230 (498)
T ss_pred -ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhH
Confidence 699999999999999999999999999999999999999999999999999998877665432 222211 0 0
Q ss_pred HHHHHHHHHhcCCCCCCCchhhhhhhhH-HhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHH
Q 007604 257 AKVIVAAIRKRNVPLPIDPQELYELDLE-YYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIP 335 (596)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~ 335 (596)
...+....... .-+....+.- ....... +. ..+..-... ....+.. +++|+++..+.
T Consensus 231 ~~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~--i~-----~~~~~~~~~-------~~~~~~~-~er~r~~~~~~ 288 (498)
T COG3104 231 GGLVVMILAAL-------LTLLLNQNTFSGVLLVIS--IL-----IAIIYFAEA-------FRSPKVF-DERRRLLAAIP 288 (498)
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH--HH-----HHHHHHHHH-------hccCccH-HHHHHHHHHHH
Confidence 11110000000 0000000000 0000000 00 000000000 0002233 67899999999
Q ss_pred HHHHhhhhhhhhhcccceeeeeec-cccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHH
Q 007604 336 ILVATFVPSTMLAQINTLFVKQGT-TLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQR 414 (596)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~ 414 (596)
+++..++||++++|+++.+..+.. ..+++.. +++.+++.++++|++.+++++|+.++++.|++++. +. +++..+
T Consensus 289 Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~-g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~-~~---ps~~~K 363 (498)
T COG3104 289 LFLFAVIFWALYEQMGSSLNLYADRNVNRQIF-GFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN-KQ---PSTPIK 363 (498)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHhhccccc-ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC-CC---CCcchH
Confidence 999999999999999987765544 3455533 48899999999999999999999999999988885 23 588889
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHH
Q 007604 415 MGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGT 494 (596)
Q Consensus 415 l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~ 494 (596)
+.+|+.+++.+++++........+ .....|.+|+++.++++++||.+..|...++++..+|+.+.+.++
T Consensus 364 FalGl~l~g~~fl~l~~~~~~~~~-----------~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~m 432 (498)
T COG3104 364 FALGLILAGLGFLILLLAGIWFGG-----------PSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIM 432 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcC-----------CCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHH
Confidence 999999999999888766432211 022579999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccc
Q 007604 495 SYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYV 563 (596)
Q Consensus 495 g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 563 (596)
|.|.+++..|+.++..+.+.... + ++ ..+......+|+..+...++.........++.+
T Consensus 433 a~wfLt~a~~~~l~g~va~~~~~-~-----~~----~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~ 491 (498)
T COG3104 433 AMWFLTVAAGQTLGGQVAGLTAV-T-----DP----AYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLN 491 (498)
T ss_pred HHHHHHHHHHHHhhceecccccc-c-----ch----hhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999998874221 0 00 011223356788888877777766666655543
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=3e-36 Score=327.14 Aligned_cols=462 Identities=14% Similarity=0.225 Sum_probs=331.2
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHH
Q 007604 29 RGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFF 108 (596)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 108 (596)
+++||.++.+++.++++++++|++..+++.|+++++|++..+++++.+.+....++.++++|+++||++||||+++++.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999994499999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhh
Q 007604 109 FYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKL 188 (596)
Q Consensus 109 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (596)
++.++.++++++.+ ....++++|.++++|.|+..|+..++++|++|++++ ||.
T Consensus 90 ~~~~g~~~~~~~~~-----------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~----~~~ 142 (489)
T PRK10207 90 VLAIGYFMTGMSLL-----------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP----RLD 142 (489)
T ss_pred HHHHHHHHHHHhcc-----------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch----hhh
Confidence 99999999987641 233466889999999999999999999999998752 468
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceecc--CCCCChhHHHHHHHHH----
Q 007604 189 SFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHK--KPAGSPFTRMAKVIVA---- 262 (596)
Q Consensus 189 ~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---- 262 (596)
+++++++++.|+|.++||.+++++.+..|||+.|+++++..+++++.+...++.+++. ++++++. |..+.+..
T Consensus 143 ~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~l~~~~~ 221 (489)
T PRK10207 143 GAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPM-SFSKLLLVLLGS 221 (489)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccch-hhhhHHHHHHHH
Confidence 8999999999999999999999999999999999998776666666666655444332 2222222 11111100
Q ss_pred ---HHH-hcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHH
Q 007604 263 ---AIR-KRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILV 338 (596)
Q Consensus 263 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~ 338 (596)
... ................... . ....++. +..+.++++ +++.+..+.+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~--i----------~~~~f~~------------~~~~~~~~~-r~r~~~~~~l~~ 276 (489)
T PRK10207 222 VVMIFVCAWLMHNVEVANLVLIVLSI--V----------VTIIFFR------------EAFKLDKTG-RNKMFVAFVLML 276 (489)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHH--H----------HHHHHHH------------HHhcCCHHH-HHHHHHHHHHHH
Confidence 000 0000000000000000000 0 0000000 000111222 344455566667
Q ss_pred Hhhhhhhhhhcccceeeeeec-cccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHH
Q 007604 339 ATFVPSTMLAQINTLFVKQGT-TLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGI 417 (596)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~ 417 (596)
....+|..+.|....+..+.+ .+++... ++.++++.+.+++++.+++..|+.+++.+|+++|... +++..++.+
T Consensus 277 ~~~~f~~~~~q~~~~l~l~~~~~~~~~~~-G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~----~~~~~k~~~ 351 (489)
T PRK10207 277 EAVVFYILYAQMPTSLNFFAINNVHHEIL-GFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKD----LSMPMKFTL 351 (489)
T ss_pred HHHHHHHHHHHcccHHHHHHHHhcccccc-ceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCC----CCcHHHHHH
Confidence 788899999988765544433 3444443 5677888889999999999999999999999887422 578889999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHH
Q 007604 418 GLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYS 497 (596)
Q Consensus 418 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~ 497 (596)
|+++.+++++.++.......+ . ....+++|+++.+++.|+||.+..|..++++.+.+|++++|.++|++
T Consensus 352 G~~l~~~~~~~~~~~~~~~~~---~--------~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~ 420 (489)
T PRK10207 352 GMFLCSLGFLTAAAAGMWFAD---A--------QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMW 420 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhcC---C--------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHH
Confidence 999999898765432210000 0 01357788999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007604 498 MTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYK 565 (596)
Q Consensus 498 ~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 565 (596)
++.+++|+.+|..+...+.... ...++. ...+.+.++|..+++.+++..++++++.++.++.
T Consensus 421 ~l~~~ig~~lg~~l~~~~~~~~--~~~~~~----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFTAVPD--NITDPL----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHHHHHhcccc--ccccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887653100 001111 0112356788888888887777777776665544
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=3.4e-35 Score=318.65 Aligned_cols=453 Identities=15% Similarity=0.202 Sum_probs=329.2
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHH
Q 007604 29 RGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDK--LHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIA 106 (596)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 106 (596)
.+++|.++.+++.++++++++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++||++|||+++.++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 34668899999999999999999999999999987 9999999999999999999999999999999944999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhh
Q 007604 107 FFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAH 186 (596)
Q Consensus 107 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 186 (596)
.++.+++.++++++. +...+++++++.|+|.|+..|+..++++|++|++++ .+
T Consensus 86 ~~~~~~g~~~~~~~~------------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~---~~ 138 (475)
T TIGR00924 86 GIVLMLGHFMLAMSI------------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM---PR 138 (475)
T ss_pred HHHHHHHHHHHHhcc------------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc---cc
Confidence 999999998887653 556778899999999999999999999999997642 14
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhH----HH-HHH--
Q 007604 187 KLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFT----RM-AKV-- 259 (596)
Q Consensus 187 r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~-- 259 (596)
|++++++++++.|+|.++||.+++++.+..||++.|+++++..+++++.++..++.+++.++++++.+ +. .+.
T Consensus 139 r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (475)
T TIGR00924 139 RDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLA 218 (475)
T ss_pred ccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHH
Confidence 88899999999999999999999999998899999999887776676666665555433322221111 00 000
Q ss_pred ----HHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHH
Q 007604 260 ----IVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIP 335 (596)
Q Consensus 260 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~ 335 (596)
+....+....... ........... .. ..+....... . ++ ..++ .++++....+.
T Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~---------~~~~~~~~~~-~--~~----~~~~-~~~~~~~~~l~ 276 (475)
T TIGR00924 219 LLAALALVFFCAWLMHH-VVIANILLMTV----TL---------AVIIFFFRLA-F--KP----RLDA-VARNKMYAYIV 276 (475)
T ss_pred HHHHHHHHHHHHHHHhc-cHHHHHHHHHH----HH---------HHHHHHHHHH-H--hc----cCCH-HHHhHHHHHHH
Confidence 0000000000000 00000000000 00 0000000000 0 00 0111 22344455677
Q ss_pred HHHHhhhhhhhhhcccceee-eeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHH
Q 007604 336 ILVATFVPSTMLAQINTLFV-KQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQR 414 (596)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~ 414 (596)
+++...++|+.+.|..+.+. .+...++.+++ ++.++++.+.++|++.+++.+|+.+++..++.||... ++...+
T Consensus 277 l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~-~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~----~~~~~k 351 (475)
T TIGR00924 277 LFLEAVVFWVLYAQMPTSLNFFADNNMHHEML-GMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKD----PTTPLK 351 (475)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHhcccccc-ceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCC----CCcHHH
Confidence 77888899999999887543 33334566655 5788899999999999999999999888777776211 466678
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHH
Q 007604 415 MGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGT 494 (596)
Q Consensus 415 l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~ 494 (596)
+.+|+++.+++++.+++... ..++ ..+.+++|+++.+++.++||.+..|..++++.+.+|+++||+++
T Consensus 352 ~~~G~~l~~~~~~~~~~~~~----~~~~--------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~ 419 (475)
T TIGR00924 352 FTLGMLFCGASFLTFAASIW----FADA--------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQML 419 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHh----hcCC--------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999988776421 1111 11468999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccc
Q 007604 495 SYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYV 563 (596)
Q Consensus 495 g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 563 (596)
|++.+...+|+.+++.+.+.... ..+...+|...++..++..+++++..++.+
T Consensus 420 g~~~l~~~~g~~l~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 420 GMWFLAQAMGSLLGGYLATFGAV----------------PQGVTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----------------ccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876642 112345677777777777777766665543
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=7.7e-35 Score=311.82 Aligned_cols=427 Identities=16% Similarity=0.279 Sum_probs=310.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
|++.++.++++++++++++|++..+++.|+++++|+++.+++.+.+.+.....++++++|+++||++||||+++++.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++.++++...+ +...++++..+..+|.|...++..++++|++|++++ +|.++
T Consensus 87 ~lg~lll~~~~~-----------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~----~R~sg 139 (493)
T PRK15462 87 AIGHVVLGASEI-----------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP----RRDGG 139 (493)
T ss_pred HHHHHHHHHhhc-----------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc----cccce
Confidence 998876654320 223355566667788889899999999999998642 49999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccC-CCCChhH--HHHHHHHHHHHhc
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKK-PAGSPFT--RMAKVIVAAIRKR 267 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~ 267 (596)
++++|...|+|+.++|.+.+++.+..||++.|.++++..+++++.++..++.+.+.. .+++|.+ +...........-
T Consensus 140 f~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (493)
T PRK15462 140 FSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVL 219 (493)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHH
Confidence 999999999999999999999999899999999988877777777666555543321 1111111 1100000000000
Q ss_pred CCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhh
Q 007604 268 NVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTML 347 (596)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 347 (596)
-. ..+......-..... . ............+- ..... ...+.+++|++...+.++++...||+.+
T Consensus 220 ~~---~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~--~~~~~-~~~~~~er~r~~~~~~l~~~~~~Fw~~~ 284 (493)
T PRK15462 220 LV---ATPALITVLFWKEWS-V--------YALIVATIIGLGVL--AKIYR-KAENQKQRKELGLIVTLTFFSMLFWAFA 284 (493)
T ss_pred HH---HHHHHHHHHHHHHHH-H--------HHHHHHHHHHHHHH--HHHHH-hcCCHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 00 000000000000000 0 00000000000000 00000 0112356778888888899999999999
Q ss_pred hcccceeeee-eccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHH
Q 007604 348 AQINTLFVKQ-GTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIM 426 (596)
Q Consensus 348 ~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~ 426 (596)
.|.++.+... ..++|+++. ++++|+..++++|++.+++++|+..+++.++.||.. .++...++.+|++++++++
T Consensus 285 ~Q~~~sl~lfa~~~vd~~~~-g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~----~~s~~~Kfa~g~~~~g~~f 359 (493)
T PRK15462 285 QQGGSSISLYIDRFVNRDMF-GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNR----TVRIWGKFALGLGLMSAGF 359 (493)
T ss_pred HHhhHHHHHHHHHhccchhc-ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCC----CCCcHHHHHHHHHHHHHHH
Confidence 9999754322 346778877 788999999999999999999999999988865421 1578889999999999999
Q ss_pred HHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHH-hHHH
Q 007604 427 VIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTL-GVGN 505 (596)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~-~ig~ 505 (596)
+++.+..... ++++ ..+.+|++..++++++||.+..|...+++.+.+|++.||++||++.+.. .+|+
T Consensus 360 ~~l~~~~~~~----~~~~--------~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~ 427 (493)
T PRK15462 360 CILTLSARWS----AMYG--------HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIAN 427 (493)
T ss_pred HHHHHHHhhc----CCCC--------CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 8887643211 1111 3688999999999999999999999999999999999999999998854 7999
Q ss_pred HHHhHHHhhhh
Q 007604 506 FLSSFLLSTVS 516 (596)
Q Consensus 506 ~lg~~~~~~i~ 516 (596)
.++..+.....
T Consensus 428 ~~~g~~~~~~~ 438 (493)
T PRK15462 428 YLAGVIADQTS 438 (493)
T ss_pred HHHHHHHHHhc
Confidence 98888877663
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=4.2e-34 Score=311.85 Aligned_cols=457 Identities=13% Similarity=0.231 Sum_probs=326.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHH
Q 007604 30 GGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF 109 (596)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 109 (596)
+++|.++.+++.++++++++|++..+++.|+++++|++..+++++.+.+.......++++|+++||++|||++++++.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999998888787888889999999944999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhh
Q 007604 110 YLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLS 189 (596)
Q Consensus 110 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (596)
..++.++++++.+ +...++++++++|+|.|...|+..++++|++|++++ +|..
T Consensus 98 ~~ig~~l~~~~~~-----------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~----~~~~ 150 (500)
T PRK09584 98 LAIGYALVAWSGH-----------------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP----RLDG 150 (500)
T ss_pred HHHHHHHHHHhcc-----------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch----hhhh
Confidence 9999888877531 345567889999999999999999999999987641 4667
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceecc--CCCCChhHHH------HHHH-
Q 007604 190 FFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHK--KPAGSPFTRM------AKVI- 260 (596)
Q Consensus 190 ~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~- 260 (596)
++++++++.++|..+||.+++++.+..|||+.|++.++..+++++.++..++..+++ ++++++.+.. ....
T Consensus 151 ~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (500)
T PRK09584 151 AFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVA 230 (500)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHH
Confidence 889999999999999999999999999999999998876666665555444333322 2222222110 0000
Q ss_pred HHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHh
Q 007604 261 VAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVAT 340 (596)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ 340 (596)
...........++.......... .....+.... ....++ .++++.+..+.+++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~ 285 (500)
T PRK09584 231 LIAIATWLLHNQEIARMALGVVA---------------LGIVVIFGKE---------AFAMKG-AARRKMIVAFILMLEA 285 (500)
T ss_pred HHHHHHHHHhcchHHHHHHHHHH---------------HHHHHHHHHH---------HhhcCH-HHHHHHHHHHHHHHHH
Confidence 00000000000000000000000 0000000000 001112 2345555566677888
Q ss_pred hhhhhhhhcccceeeeeec-cccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHH
Q 007604 341 FVPSTMLAQINTLFVKQGT-TLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGL 419 (596)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~ 419 (596)
++||+.+.|.+..+..+.. .++.++. ++.++++.+.+++++.+++.+|+.+++..|+.+| .++.+++.+|+
T Consensus 286 i~f~~~~~q~~~~l~~~~~~~~~~~~~-g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-------~~~~~~~~~G~ 357 (500)
T PRK09584 286 IIFFVLYSQMPTSLNFFAIRNVEHSIL-GIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-------LPMPHKFAIGM 357 (500)
T ss_pred HHHHHHHHHhccHHHHHHHHhcccccc-ceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-------CCcHHHHHHHH
Confidence 8999999999988766543 2444444 4677899999999999999999999988777766 46778999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHH
Q 007604 420 VIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMT 499 (596)
Q Consensus 420 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 499 (596)
++++++++.+...... .+++ ...+.+|+++.+++.++||++..|...+++.+.+|+++||+++|++.+
T Consensus 358 ~l~~l~f~~l~~~~~~----~~~~--------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l 425 (500)
T PRK09584 358 VLCSGAFLVLPLGAKF----ANDA--------GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFL 425 (500)
T ss_pred HHHHHHHHHHHHHHHh----cCCC--------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999887765421 1111 146788999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHhHHHhhhhccccccCCCCccccCC-cccchhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007604 500 TLGVGNFLSSFLLSTVSDITKRHGHKGWILNNL-NVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYK 565 (596)
Q Consensus 500 ~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~-~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 565 (596)
...+|+.++..+...+.. .+-..+.. ..+++..+|..+++++++..++++...++.++.
T Consensus 426 ~~a~g~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 426 TTAGAALIAGYVANLMAV-------PDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHHHHHHhcc-------ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888864421 00000111 112356788888887777766666666655543
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.97 E-value=1.8e-27 Score=263.36 Aligned_cols=334 Identities=24% Similarity=0.441 Sum_probs=270.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 007604 47 MAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGL 126 (596)
Q Consensus 47 ~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~ 126 (596)
++|||+...+..|+.+.+|++.+++..+...+.....+.++++|+++|+++||++++.++.++..+|..+++++.. +..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-ccc
Confidence 4689999999999999999999999999999999999999999999999999999999999999999988887531 110
Q ss_pred CCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhh
Q 007604 127 KPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGN 206 (596)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~ 206 (596)
....+....+++..++++|.|+..|+..++.+|+++++++ ++|.++++++|+++|+|+.+++
T Consensus 80 ---------------~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~ 141 (654)
T TIGR00926 80 ---------------GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLIST 141 (654)
T ss_pred ---------------ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHH
Confidence 0012345577889999999999999999999999986532 3589999999999999999999
Q ss_pred hhhhhcccc-------ccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhh
Q 007604 207 TVLVYIQDD-------VGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELY 279 (596)
Q Consensus 207 ~~~~~l~~~-------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (596)
++.+++.+. .+|..+|.+++++++++++++...+++++++++.+++..+..++++.+.++++...+..
T Consensus 142 ~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~----- 216 (654)
T TIGR00926 142 IITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH----- 216 (654)
T ss_pred HHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc-----
Confidence 999988743 36999999999999999988888888877777777777777777766666543211100
Q ss_pred hhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeec
Q 007604 280 ELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGT 359 (596)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (596)
...+++|.+..+. ..++++++|++++++.++....++|..+.|..+.+..|..
T Consensus 217 ------------------~~~~~ld~a~~~~---------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~ 269 (654)
T TIGR00926 217 ------------------WPLHWLDYAKDKH---------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQAT 269 (654)
T ss_pred ------------------cchhHHHHhcccc---------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Confidence 0123444433321 2345788899999999999999999999999998888887
Q ss_pred cccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhh
Q 007604 360 TLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERY 435 (596)
Q Consensus 360 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~ 435 (596)
.++.+++ ++.++++.+..++++.++++.|+.+..+.+..+|+... +++..++.+|+++.+++++++++.+.+
T Consensus 270 ~m~~~l~-g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ve~~ 341 (654)
T TIGR00926 270 RMDGDVG-GFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQLK 341 (654)
T ss_pred HhcCccC-CEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766 57889999999999999999999997777776665322 678999999999999999888776654
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.95 E-value=9.1e-25 Score=244.79 Aligned_cols=156 Identities=14% Similarity=0.104 Sum_probs=132.4
Q ss_pred HHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 007604 53 SSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCN 132 (596)
Q Consensus 53 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 132 (596)
...+..++.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++..++.++++++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~----------- 253 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ----------- 253 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 44555667788999999999999999999999999999999998 999999999999999888888764
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhc
Q 007604 133 DINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYI 212 (596)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l 212 (596)
+...++++|++.|+|.|+..|...+++.|.+|++. |+..+++......+|.++++.++..+
T Consensus 254 -------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 254 -------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788999999999999999999999999999885 99999999999999999998766544
Q ss_pred cc-------------cccchhhhHHHHHHHHHHHHHHHhc
Q 007604 213 QD-------------DVGWALGYGLPALGLAIAIAIFLAG 239 (596)
Q Consensus 213 ~~-------------~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (596)
.. ..+||+.+++.++..++.++..++.
T Consensus 315 l~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~l 354 (742)
T TIGR01299 315 IPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFM 354 (742)
T ss_pred HHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHc
Confidence 32 2368998888777666555544443
No 9
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=2.8e-24 Score=228.62 Aligned_cols=374 Identities=11% Similarity=0.059 Sum_probs=250.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
+|.+..+.+..+...++.......++.|+++++|.++.+.+++.+++.++..+++++.|+++||+ ||||+++.+.++..
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCA 92 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHH
Confidence 35677788888888888888888999999999999999999999999999999999999999998 99999999999888
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++.+.+.++.....+ ...+...+++.|+++|++.+...+....++.|.+|+++ |+++.
T Consensus 93 ~~~~~~~~~~~~~~~----------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~ 150 (399)
T PRK05122 93 LSGLLYLLAGLLAAW----------------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVI 150 (399)
T ss_pred HHHHHHHHhhhhhcc----------------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccch
Confidence 877766554211100 00145678899999999999999999999999999886 99999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCC
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPL 271 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (596)
++.....++|..+|+.+++++.+..||+..+++.++..++..+.. ++. +..++++++..+..
T Consensus 151 ~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~-------------- 212 (399)
T PRK05122 151 SWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA---RPR-PAVPPVKGERLPFR-------------- 212 (399)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH---hcC-CCCCCCCccchhHH--------------
Confidence 999999999999999999999888999998877665443332221 111 11100000000000
Q ss_pred CCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHh-HHHHHHHhhhhhhhhhcc
Q 007604 272 PIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLA-MIPILVATFVPSTMLAQI 350 (596)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~-~~~~~~~~~~~~~~~~~~ 350 (596)
+..|.... .....+....+.......
T Consensus 213 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (399)
T PRK05122 213 -----------------------------------------------------RVLGRVWPYGMGLALASIGFGTIATFI 239 (399)
T ss_pred -----------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 000111111111111111
Q ss_pred cceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 007604 351 NTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIAS 430 (596)
Q Consensus 351 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~ 430 (596)
+.++..+ +.+ ..+.......++.+++.++.+++.||.++| +.+..+.++.+++++...
T Consensus 240 ~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~~~~~~~~~~~~~~ 297 (399)
T PRK05122 240 TLYYAAR--GWD---------GAALALTLFGVAFVGARLLFGNLINRLGGL-----------RVAIVSLLVEILGLLLLW 297 (399)
T ss_pred HHHHHHc--ccc---------cchHHHHHHHHHHHHHHHHHHHHHHHhccH-----------HHHHHHHHHHHHHHHHHH
Confidence 1111111 000 111222334455556666666666555444 345566666666665554
Q ss_pred HHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhH
Q 007604 431 FTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSF 510 (596)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~ 510 (596)
.. .+.+.+++..++.|++.+...+.......+..|++.||+++|+++....+|..+++.
T Consensus 298 ~~---------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 356 (399)
T PRK05122 298 LA---------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGP 356 (399)
T ss_pred Hh---------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 42 234455566788899998888888888889999999999999999999999999999
Q ss_pred HHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 007604 511 LLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVV 558 (596)
Q Consensus 511 ~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 558 (596)
+.+.+.+.. ++...|++.+++.+++.++.+..
T Consensus 357 ~~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 357 LAGLVASWF----------------GYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHHHHc----------------CHHHHHHHHHHHHHHHHHHHHHh
Confidence 888876421 34667777777766665555444
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=2.3e-24 Score=229.71 Aligned_cols=357 Identities=12% Similarity=0.116 Sum_probs=234.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
+|......++..++..+..+......| .+.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 90 (406)
T PRK11551 13 LALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVALF 90 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 344455555666666666655544444 55678999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++.+++.++. +...+++.|++.|++.+...+...+++.|.+|+++ |+++
T Consensus 91 ~~~~~~~~~~~------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~ 140 (406)
T PRK11551 91 GLFSLATAQAW------------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTA 140 (406)
T ss_pred HHHHHHHHHhc------------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 88887777653 67788899999999999999999999999999876 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCC
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVP 270 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (596)
.++.+...++|..+++.+++.+.+..+|++.|++.++..++..+......++.++.+++++.
T Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------------------ 202 (406)
T PRK11551 141 VSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA------------------ 202 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc------------------
Confidence 99999999999999999988888888999999887765444433333222221110000000
Q ss_pred CCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcc
Q 007604 271 LPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQI 350 (596)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~ 350 (596)
..+..... + .. . ++.+.++........++....++....+.
T Consensus 203 -~~~~~~~~------------------------~-~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (406)
T PRK11551 203 -GKQRAPVL------------------------R-AL------------F-GEGRATATLLLWISYFFTLIVLYFLLNWL 243 (406)
T ss_pred -chhhhhhH------------------------H-HH------------h-hhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 0 00 0 00000111111111111112222222222
Q ss_pred cceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 007604 351 NTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIAS 430 (596)
Q Consensus 351 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~ 430 (596)
+.+...+ +.+ ....+.......+..+++..+..++.||+++| +.+.++++..+++++...
T Consensus 244 p~~~~~~--g~s-------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~~~~~~~~~~~ 303 (406)
T PRK11551 244 PSLLVGQ--GLS-------RSQAGLVQIAFNIGGALGSLLIGALMDRLRPR-----------RVVLLIYAGILASLAALA 303 (406)
T ss_pred HHHHHhC--CCC-------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH-----------HHHHHHHHHHHHHHHHHH
Confidence 2221111 111 11223344555666777777888877777665 223344444444444333
Q ss_pred HHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhH
Q 007604 431 FTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSF 510 (596)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~ 510 (596)
.. .+.+.+....++.+++.....+..+++..|.+|++.||+++|+.+....+|..+|+.
T Consensus 304 ~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~ 362 (406)
T PRK11551 304 AA---------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPL 362 (406)
T ss_pred hc---------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhh
Confidence 22 133444555677787777778888899999999999999999999999999999999
Q ss_pred HHhhhhc
Q 007604 511 LLSTVSD 517 (596)
Q Consensus 511 ~~~~i~~ 517 (596)
+.+.+.+
T Consensus 363 ~~g~l~~ 369 (406)
T PRK11551 363 LAGQLLA 369 (406)
T ss_pred hHhhhhc
Confidence 9998865
No 11
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=2.5e-24 Score=228.45 Aligned_cols=374 Identities=11% Similarity=0.082 Sum_probs=245.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
+|...+.+.+..+......+.....+| .+.+++|.++.+.+++.+.+.++..+++++.|+++||+ |||+++.++.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHH
Confidence 344455556655554444443333344 56779999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++.+.+.+++ +.+.++++|+++|++.+...+...+++.|++|+++ |+++
T Consensus 85 ~~~~~~~~~~~------------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~ 134 (390)
T PRK03545 85 IASHVLSALAW------------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQA 134 (390)
T ss_pred HHHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhH
Confidence 99998888774 78889999999999999888999999999999876 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCC
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVP 270 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (596)
.++.....++|..++|.+++.+.+..|||++|++.++..++..+..+...|+.++++ +++.++. .
T Consensus 135 ~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~----~--------- 199 (390)
T PRK03545 135 LSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEH--SGSLKSL----P--------- 199 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--cchHHHH----H---------
Confidence 999999999999999999999988899999999888765544433333222211100 0000000 0
Q ss_pred CCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhH-HHHHHHhhhhhhhhhc
Q 007604 271 LPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAM-IPILVATFVPSTMLAQ 349 (596)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~-~~~~~~~~~~~~~~~~ 349 (596)
+..+.+.+... ...++.....+.....
T Consensus 200 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (390)
T PRK03545 200 ----------------------------------------------------LLFRRPALVSLYLLTVVVVTAHFTAYSY 227 (390)
T ss_pred ----------------------------------------------------HHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111111 1111111222222222
Q ss_pred ccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHH
Q 007604 350 INTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIA 429 (596)
Q Consensus 350 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~ 429 (596)
.+.+...+ .+.+. ...+.......+..+++..+.+++.||..+| .+..+..+.+++....
T Consensus 228 ~~~~l~~~-~g~s~-------~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~------------~~~~~~~~~~~~~~~l 287 (390)
T PRK03545 228 IEPFVQQV-AGLSE-------NFATLLLLLFGGAGIIGSVLFSRLGNRHPSG------------FLLIAIALLLVCLLLL 287 (390)
T ss_pred HHHHHHHh-cCCCc-------cHHHHHHHHHHHHHHHHHHHHHHHhhccchh------------HHHHHHHHHHHHHHHH
Confidence 22222111 11111 1112233344455566666666655443322 2444444444444333
Q ss_pred HHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHh
Q 007604 430 SFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSS 509 (596)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~ 509 (596)
... ..+.+.+++..++.|++.+...+.....+.+..| +.|++++|+++....+|..+|+
T Consensus 288 ~~~--------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~ 346 (390)
T PRK03545 288 LPA--------------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGA 346 (390)
T ss_pred HHH--------------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHH
Confidence 221 1244555667788888887777877888888877 5889999999999999999999
Q ss_pred HHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhh
Q 007604 510 FLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAK 560 (596)
Q Consensus 510 ~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 560 (596)
.+.+.+.+.. ++...|++.+++.+++.++++...+
T Consensus 347 ~~~G~~~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 347 LLGNQVSLHL----------------GLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHhcc----------------ChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999987532 3456777777777777777666543
No 12
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=5.5e-24 Score=225.90 Aligned_cols=374 Identities=11% Similarity=0.042 Sum_probs=245.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+.++.+.+..++..++.....+.+|.|+.+++|.|..+.+++.+.+.++..+++++.|+++||+ ||||+++++.+...+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHH
Confidence 4566666777777777777778888899999999999999999999999999999999999998 999999999887776
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.+........+.. ...+...++++|+++|++.+...+...+++.|.+|+++ |+++++
T Consensus 94 ~~~~~~~~~~~~~~----------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a~~ 151 (392)
T PRK12382 94 AGLAYLLAAILPVS----------------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKVMS 151 (392)
T ss_pred HHHHHHhhhccccc----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchhhh
Confidence 65443322111100 01267788999999999999988988999999999876 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCC
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLP 272 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (596)
+.+.+.++|..+||.+++++.+..||+..+.+..+..++... ..+ +.++.+++++...+..+.
T Consensus 152 ~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~------------- 214 (392)
T PRK12382 152 WNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA---FNG-TVRKVPAHAGERPSLWSV------------- 214 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH---HHH-hccCCCCCcccCchHHHH-------------
Confidence 999999999999999999998888999877655443222221 111 111111100000000000
Q ss_pred CCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccc
Q 007604 273 IDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINT 352 (596)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 352 (596)
. +.. .+.... ..+....+.......+.
T Consensus 215 ---------------------------~---------------------~~~--~~~~~~---~~l~~~~~~~~~~~~~~ 241 (392)
T PRK12382 215 ---------------------------V---------------------GLI--WKPGLG---LALQGVGFAVIGTFVSL 241 (392)
T ss_pred ---------------------------H---------------------HHH--HHhHHH---HHHHHHHHhHHHHHHHH
Confidence 0 000 000000 01111111111111111
Q ss_pred eeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 007604 353 LFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFT 432 (596)
Q Consensus 353 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~ 432 (596)
++.. .... ..+.......+..+++.++.+++.||+++|+ .+..+..+.+++++.....
T Consensus 242 ~~~~------~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-----------~~~~~~~~~~~~~~~~~~~ 299 (392)
T PRK12382 242 YFAS------KGWA-----MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVK-----------VAIVSLLVETVGLLLLWLA 299 (392)
T ss_pred HHHh------cCCc-----hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-----------ehHHHHHHHHHHHHHHHHc
Confidence 1111 0100 1112223344555666777777776666552 2555666666665554432
Q ss_pred hhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHH
Q 007604 433 ERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLL 512 (596)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~ 512 (596)
.+.+...+..++.+++.+...+.......+.+|++.||++.|+++....+|..+++.+.
T Consensus 300 ---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~ 358 (392)
T PRK12382 300 ---------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLA 358 (392)
T ss_pred ---------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 13344555678888888888888888889999999999999999999999999999999
Q ss_pred hhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 007604 513 STVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVV 558 (596)
Q Consensus 513 ~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 558 (596)
+.+.+.. ++...|.+.+++.+++.++.+..
T Consensus 359 g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 359 GMLATSF----------------GYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHh----------------CchHHHHHHHHHHHHHHHHHHhh
Confidence 9887522 34567777777777666655443
No 13
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=2.4e-24 Score=228.91 Aligned_cols=354 Identities=12% Similarity=0.056 Sum_probs=234.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
.+|+.+.+.+..++..++++.+.++++.|+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHH
Confidence 346788888889999999999999999999999999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++.++..+++ +...+++.+.+.+.+.+...+...++..|.+|+++ |+++
T Consensus 84 ~~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 133 (395)
T PRK10054 84 ASGFIAIPLVN------------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKI 133 (395)
T ss_pred HHHHHHHHHHh------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHH
Confidence 88888777764 56667777888888877778889999999999875 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCC
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVP 270 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (596)
+++.+...++|.++||.+++++.+ .+|+.+|++.++..+++++......++.+.+++++++ + ..
T Consensus 134 ~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~-~-~~------------- 197 (395)
T PRK10054 134 FSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATETG-S-VW------------- 197 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccccccchh-h-hh-------------
Confidence 999999999999999999998875 7899999988776666544333322221111000000 0 00
Q ss_pred CCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhH-HHHHHHhhhhhhhhhc
Q 007604 271 LPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAM-IPILVATFVPSTMLAQ 349 (596)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~-~~~~~~~~~~~~~~~~ 349 (596)
+. .+..+.|.+... +..++....+......
T Consensus 198 ---------------------------------~~----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 228 (395)
T PRK10054 198 ---------------------------------SP----------------SVLLQDKALLWFTCSGFLASFVSGAFASC 228 (395)
T ss_pred ---------------------------------hh----------------hhhccCceehHHHHHHHHHHHHHHHhhhh
Confidence 00 000011111111 1111111111111111
Q ss_pred ccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHH
Q 007604 350 INTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIA 429 (596)
Q Consensus 350 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~ 429 (596)
...+.... . +.... ....+.+...+.+..+...+..+++ .+|+ ++.+.+..++++.+++....
T Consensus 229 ~~~~~~~~-~--~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~~----~~~~-------~~~~~l~~~~~~~~~~~~~~ 291 (395)
T PRK10054 229 ISQYVMVV-A--DSDFA---EKVVAVVLPVNAAMVVSLQYSVGRR----LNAA-------NIRPLMTAGTLCFVIGLVGF 291 (395)
T ss_pred HHHHHHHh-c--ccchH---HHHHHHHHHhhhhheeeehhHHHHH----HccC-------CchhHHHHHHHHHHHHHHHH
Confidence 11111110 0 11100 0011122222333333333333343 3331 22344666776666666555
Q ss_pred HHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHh
Q 007604 430 SFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSS 509 (596)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~ 509 (596)
.... .+.+.+.+..++.++|++...|..++++.+.+|++.||++.+..+ ...+|..+|+
T Consensus 292 ~~~~--------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp 350 (395)
T PRK10054 292 IFSG--------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINP 350 (395)
T ss_pred HHcc--------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHH
Confidence 4321 133444556789999999999999999999999999999998766 5668999999
Q ss_pred HHHhhhhcc
Q 007604 510 FLLSTVSDI 518 (596)
Q Consensus 510 ~~~~~i~~~ 518 (596)
.+.+.+.+.
T Consensus 351 ~~~G~l~~~ 359 (395)
T PRK10054 351 LVSGVILTT 359 (395)
T ss_pred HHHHHHHHH
Confidence 999999763
No 14
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=1.8e-23 Score=222.50 Aligned_cols=345 Identities=13% Similarity=0.140 Sum_probs=234.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMI 115 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 115 (596)
+.++...++...+.+.+.++++.|+++++|++..+.|.+.+.+.+...+..+++|+++||+ |||+++.++.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 5667888888999999999999999999999999999999999999999999999999998 999999999999999998
Q ss_pred HHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHH
Q 007604 116 VLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWM 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (596)
++..+. +.+.+++.|++.|++.+...|...+++.|.+|+++ |+++.++.+
T Consensus 92 ~~~~~~------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~ 141 (400)
T PRK11646 92 TMAIAH------------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLM 141 (400)
T ss_pred HHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHH
Confidence 887653 67778899999999999888999999999999875 999999999
Q ss_pred HHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCc
Q 007604 196 FSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDP 275 (596)
Q Consensus 196 ~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (596)
...++|..+||.+++++. .+||++.|++.++..++..+......++.+. ++..++.. +..
T Consensus 142 ~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~---~~~--------------- 201 (400)
T PRK11646 142 MQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-STVRTPVR---EGM--------------- 201 (400)
T ss_pred HHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-cccchhhH---HHH---------------
Confidence 999999999999999998 6899999998876554443333222222110 00000000 000
Q ss_pred hhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcc---cc
Q 007604 276 QELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQI---NT 352 (596)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~---~~ 352 (596)
....+.+.+....... ..++....+. .+
T Consensus 202 ----------------------------------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p 232 (400)
T PRK11646 202 ----------------------------------------------TRVLRDKRFVTYVLTL---TGYYMLAVQVMLMLP 232 (400)
T ss_pred ----------------------------------------------HHHHcCchHHHHHHHH---HHHHHHHHHHHHhhh
Confidence 0000011111111111 1111111111 11
Q ss_pred eeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 007604 353 LFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFT 432 (596)
Q Consensus 353 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~ 432 (596)
.+...... + ....+.......+..+.......+ +.+|+ .+..+.+..+.++.+++++.++..
T Consensus 233 ~~~~~~~~-~-------~~~~g~l~~~~~~~~~~~~~~~~~----~~~~r------~~~~~~~~~~~~~~~~~~~~l~~~ 294 (400)
T PRK11646 233 IMVNDIAG-S-------PSAVKWMYAIEACLSLTLLYPIAR----WSEKR------FRLEHRLMAGLLIMSLSMFPIGMV 294 (400)
T ss_pred hhHHhhcC-C-------chHHHHHHHHHHHHHHHHHHHHHH----HHHHh------cchhHHHHHHHHHHHHHHHHHHHh
Confidence 11111000 0 111112222222222222222222 23221 122345667777777776655543
Q ss_pred hhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHH
Q 007604 433 ERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLL 512 (596)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~ 512 (596)
+ +.+.++...++.+.+.+...|...+++.+.+|++.||+++|++++...+|..+|+.+.
T Consensus 295 ~---------------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~ 353 (400)
T PRK11646 295 S---------------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGG 353 (400)
T ss_pred h---------------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccch
Confidence 1 2334444556778888888899999999999999999999999999999999999999
Q ss_pred hhhhccc
Q 007604 513 STVSDIT 519 (596)
Q Consensus 513 ~~i~~~~ 519 (596)
+.+.+.+
T Consensus 354 G~l~~~~ 360 (400)
T PRK11646 354 GWLFDLG 360 (400)
T ss_pred HHHHHHH
Confidence 9998654
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2.3e-23 Score=213.88 Aligned_cols=378 Identities=12% Similarity=0.065 Sum_probs=267.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHH
Q 007604 30 GGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF 109 (596)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 109 (596)
..+..++.+.+..|+...+=|...+.+|. +.+++|.+..++|+.++.|.++..++.|+...++||+ .||++++..+.+
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~l 87 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLAL 87 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHH
Confidence 34567788888888888888877777765 6779999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhh
Q 007604 110 YLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLS 189 (596)
Q Consensus 110 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (596)
+.++.+++++++ ++..++++|++.|+..|.+.+...++.++..|+++ |++
T Consensus 88 Fi~~n~l~alAp------------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~ 137 (394)
T COG2814 88 FIVSNLLSALAP------------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGR 137 (394)
T ss_pred HHHHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhh
Confidence 999999999995 89999999999999999999999999999999996 999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCC-ceeccCCCCChhHHHHHHHHHHHHhcC
Q 007604 190 FFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTP-FYRHKKPAGSPFTRMAKVIVAAIRKRN 268 (596)
Q Consensus 190 ~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (596)
+.++...+..++..+|..++.++.+.+|||..|+..+...++.++..+...| +...+ +.+.+..+..+.
T Consensus 138 Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~-~~~~~~~~~~~~--------- 207 (394)
T COG2814 138 ALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISG-SLPGPLRTLLRL--------- 207 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCC-CCCcchhHHHHH---------
Confidence 9999999999999999999999999999999999888877777776666555 11111 111111111000
Q ss_pred CCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhh
Q 007604 269 VPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLA 348 (596)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~ 348 (596)
.++.+.........+.....+..|.
T Consensus 208 -------------------------------------------------------l~~p~v~~~l~~t~l~~~g~F~~ft 232 (394)
T COG2814 208 -------------------------------------------------------LRRPGVLLGLLATFLFMTGHFALYT 232 (394)
T ss_pred -------------------------------------------------------hcCchHHHHHHHHHHHHcchhhhHH
Confidence 0111222223333344444445554
Q ss_pred cccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 007604 349 QINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVI 428 (596)
Q Consensus 349 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~ 428 (596)
++.++..+.. +++ ............++.+++..+.+++.|| .. .+.+...+.+.++.++.
T Consensus 233 Yi~P~L~~v~-g~s-------~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~-----------~~~l~~~~~l~a~~~l~ 292 (394)
T COG2814 233 YIRPFLESVA-GFS-------VSAVSLVLLAFGIAGFIGNLLGGRLADR-GP-----------RRALIAALLLLALALLA 292 (394)
T ss_pred hHHHHHHHcc-CCC-------HhHHHHHHHHHHHHHHHHHHHHhhhccc-cc-----------hhHHHHHHHHHHHHHHH
Confidence 4444332211 111 1122334445566666777777665554 22 23355566677777666
Q ss_pred HHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHH
Q 007604 429 ASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLS 508 (596)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg 508 (596)
+.+. ..+.+..+...++.+++.....+..+....+.+ ++.++.+++++....++|..+|
T Consensus 293 l~~~--------------------~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~G 351 (394)
T COG2814 293 LTFT--------------------GASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALG 351 (394)
T ss_pred HHHh--------------------cchHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHH
Confidence 5554 224444445555555555444444444444422 5889999999999999999999
Q ss_pred hHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007604 509 SFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKF 561 (596)
Q Consensus 509 ~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~ 561 (596)
..+.+.+.+. .++....+..+.+.+++.++.+...++
T Consensus 352 A~lGG~v~~~----------------~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 352 AALGGLVLDA----------------LGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHh----------------hchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999762 345667777777777776666555443
No 16
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=1.1e-23 Score=230.42 Aligned_cols=398 Identities=10% Similarity=0.029 Sum_probs=246.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
|..+..+++..++..+..-.+..-+| .+.+++|.+..+.+|+.+.+.++..++.++.|+++||+ |||++++++..++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 34455566666666555554555555 45678999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++.++++.+. +.+.++++|+++|+|.++..|.....+.+.+++++ +|++++
T Consensus 83 ~~~~~~~~a~------------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~-----~r~~~~ 133 (495)
T PRK14995 83 LASLAAAFSP------------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEK-----QRNMAL 133 (495)
T ss_pred HHHHHHHHcC------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-----HHHHHH
Confidence 9999998874 78889999999999999988888888888775433 499999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHH------HHHHHHH
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAK------VIVAAIR 265 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 265 (596)
+++....++|..+||.+++++.+..|||+.|++.....++.+++.+...|+.++++.++........ .+.....
T Consensus 134 g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~ 213 (495)
T PRK14995 134 GVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAK 213 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988766555544444433332221111111111100 0001111
Q ss_pred hcCCCCCCCchh-hhh--hhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHH-hh
Q 007604 266 KRNVPLPIDPQE-LYE--LDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVA-TF 341 (596)
Q Consensus 266 ~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~-~~ 341 (596)
... ....+... ... ..-.--. .+...+.. ...+.. +.+.-+.|.+.......+. ..
T Consensus 214 ~~~-~~~~~~~~~~~~~~~~~~~l~-----------~f~~~e~~-----~~~p~~---~~~lf~~~~~~~~~~~~~~~~~ 273 (495)
T PRK14995 214 TAL-KGFLSLWVTSLTLLTGALLLG-----------LFIRTQLA-----ASRPMI---DMRLFTHRIILSGVVMAMTAMI 273 (495)
T ss_pred hcc-ccCCchHHHHHHHHHHHHHHH-----------HHHHHHhc-----CCCCCc---CHHHhCCcccHHHHHHHHHHHH
Confidence 100 00000000 000 0000000 00000000 000000 0000111222111111111 11
Q ss_pred hhhhhhhcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHH
Q 007604 342 VPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVI 421 (596)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l 421 (596)
.++.. ....+.+.......+ ....+.......+...++.++.+++.+|+++| +.+..|+++
T Consensus 274 ~~~~~-~~~~~~~lq~v~g~s-------~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~~~~~g~~~ 334 (495)
T PRK14995 274 TLVGF-ELLMAQELQFVHGLS-------PLEAGMFMLPVMVASGFSGPIAGILVSRLGLR-----------LVATGGMAL 334 (495)
T ss_pred HHHHH-HHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----------HHHHHHHHH
Confidence 11111 111111111101111 12234444555667777788888877766655 335667777
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHH
Q 007604 422 HIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTL 501 (596)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 501 (596)
.+++++....... ..+.+......++.|+|.++..+.....+.+.+|++.+|.+++++++.+
T Consensus 335 ~~~~~~~l~~~~~------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 396 (495)
T PRK14995 335 SALSFYGLAMTDF------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAY 396 (495)
T ss_pred HHHHHHHHHHhcC------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHH
Confidence 7766655443211 1233445566788899999999999999999999999999999999999
Q ss_pred hHHHHHHhHHHhhhhc
Q 007604 502 GVGNFLSSFLLSTVSD 517 (596)
Q Consensus 502 ~ig~~lg~~~~~~i~~ 517 (596)
.+|+.+|+.+.+.+..
T Consensus 397 ~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 397 ELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999865
No 17
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.93 E-value=4.4e-23 Score=225.46 Aligned_cols=175 Identities=15% Similarity=0.146 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhh-hhh-----HHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVK-SAN-----NVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIA 106 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~-~~~-----~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 106 (596)
+......+..+++.+.+. +..+...++.++++.+..+ ..+ +.++..++..+++++.|+++||+ |||+++.++
T Consensus 16 ~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~ 93 (490)
T PRK10642 16 KAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAIT 93 (490)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHH
Confidence 445556667777776655 4556666888888644322 122 24667788999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhh
Q 007604 107 FFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAH 186 (596)
Q Consensus 107 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 186 (596)
++++.++.++++++++...+ +......+.+.|+++|+|.|+..+...++++|++|+++
T Consensus 94 ~~l~~i~~~~~a~~~~~~~~----------------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------ 151 (490)
T PRK10642 94 IVIMSISTFCIGLIPSYATI----------------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------ 151 (490)
T ss_pred HHHHHHHHHHHHhcccHHHH----------------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------
Confidence 99999999999987521100 00011247889999999999999999999999999986
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhcc--------ccccchhhhHHHHHHHHH
Q 007604 187 KLSFFNWWMFSIFFGTLLGNTVLVYIQ--------DDVGWALGYGLPALGLAI 231 (596)
Q Consensus 187 r~~~~~~~~~~~~ig~~l~~~~~~~l~--------~~~g~~~~f~~~~~~~~~ 231 (596)
|+.+.++...+..+|..+|+.+...+. ..+|||++|++.++..++
T Consensus 152 Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 152 RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 999999988888888887775543332 257999999987654443
No 18
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=3.4e-23 Score=225.33 Aligned_cols=404 Identities=12% Similarity=0.051 Sum_probs=245.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
.|..+.+.+..++..+..+.+...+|.+.+ ++|.++.+.+++.+.+.++..++.+++|+++||+ |||++++.+..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 346777888888888888888888888775 6999999999999999999999999999999998 99999999988888
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++.+++.++. +...++++|+++|++.+...|...+++.|.+|+++ |+++.
T Consensus 87 ~~~~~~~~~~------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 136 (471)
T PRK10504 87 LGSLFCALSG------------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAM 136 (471)
T ss_pred HHHHHHHHhC------------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHH
Confidence 8888776653 67778899999999999999999999999999775 99999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHH---HHHHHHH-hc
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAK---VIVAAIR-KR 267 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~ 267 (596)
++.+...++|..+||.+++++.+..|||+.|++......+..+......++.+..+.+.+....... ....... +.
T Consensus 137 ~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 216 (471)
T PRK10504 137 TFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDG 216 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999989999999988766555554444433332221111111110000 0000000 00
Q ss_pred CCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhh
Q 007604 268 NVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTML 347 (596)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 347 (596)
.....-.+......-..-.. .......+++... .+. ... ++.+.|.+...+...+.....+...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~-~~~--~~~-~l~~~~~~~~~l~~~~~~~~~~~~~ 280 (471)
T PRK10504 217 SKGLGLSPLAIAGLVAVGVV------------ALLLYLLHARNNN-RAL--FSL-KLFRTRTFSLGLAGSFAGRIGSGML 280 (471)
T ss_pred CCcCCcchHHHHHHHHHHHH------------HHHHHHHHHhcCC-CCc--cCH-HHhcccchHHHHHHHHHHHHHHHHH
Confidence 00000000000000000000 0000000000000 000 000 0111122222221111111111111
Q ss_pred hcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHH
Q 007604 348 AQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMV 427 (596)
Q Consensus 348 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~ 427 (596)
....+++.....+.+ ....+.......+..++..++..++.||+++| +.+..+.++.+++..
T Consensus 281 ~~~~~~~~~~~~g~~-------~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----------~~~~~~~~~~~~~~~ 342 (471)
T PRK10504 281 PFMTPVFLQIGLGFS-------PFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----------RVLVATTLGLALVSL 342 (471)
T ss_pred HHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----------HHHHHHHHHHHHHHH
Confidence 111222221111111 11122223333444455556666666555544 445566666665554
Q ss_pred HHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHH
Q 007604 428 IASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFL 507 (596)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~l 507 (596)
...+... ..+.+.+....++.|++.++..+....+..+.+|++.+|+++|++++.+.+|..+
T Consensus 343 ~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i 404 (471)
T PRK10504 343 LFMLVAL------------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSI 404 (471)
T ss_pred HHHhccc------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHH
Confidence 4443210 1123333445677788888888888999999999999999999999999999999
Q ss_pred HhHHHhhhhccc
Q 007604 508 SSFLLSTVSDIT 519 (596)
Q Consensus 508 g~~~~~~i~~~~ 519 (596)
|+.+.+.+.+..
T Consensus 405 g~~i~g~ll~~~ 416 (471)
T PRK10504 405 GVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHHHh
Confidence 999999887654
No 19
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=1e-23 Score=229.76 Aligned_cols=399 Identities=12% Similarity=0.081 Sum_probs=228.7
Q ss_pred cCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccc
Q 007604 64 LHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKAS 143 (596)
Q Consensus 64 lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (596)
+|.+..+.+++.+.+.++..++++++|+++||+ |||++++++.+++.++.++++++..+.. +...++
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~------------~~~~~~ 116 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFT------------SIGPDN 116 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccc------------cccccc
Confidence 388999999999999999999999999999998 9999999999999888887775421000 000011
Q ss_pred cchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcc--------cc
Q 007604 144 TLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQ--------DD 215 (596)
Q Consensus 144 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~--------~~ 215 (596)
......++++|+++|++.|+..|...++++|++|+++ |+++.++.+.+..+|.++++.+++.+. +.
T Consensus 117 ~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 190 (479)
T PRK10077 117 TGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNT 190 (479)
T ss_pred hhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccc
Confidence 1246678899999999999999999999999999986 999999999999999999886655432 35
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCccccc
Q 007604 216 VGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIG 295 (596)
Q Consensus 216 ~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (596)
.|||++|++.++..++..+..++.+ +.++....+++.++..+... +..+ .....+.. ++.
T Consensus 191 ~gWr~~f~~~~~~~~~~~~~~~~l~-~s~~~l~~~~~~~~~~~~~~---~~~~---~~~~~~~~--~~~----------- 250 (479)
T PRK10077 191 DGWRYMFASEAIPALLFLMLLYFVP-ETPRYLMSRGKQEQAEGILR---KIMG---NTLATQAL--QEI----------- 250 (479)
T ss_pred CChHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHcCCHHHHHHHHH---HHcC---ChhHHHHH--HHH-----------
Confidence 7899999988766555544433332 21111000111111111000 0000 00000000 000
Q ss_pred CCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccc-----eeeeeeccccccCCCccc
Q 007604 296 STQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINT-----LFVKQGTTLDRAIGSSFK 370 (596)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~ 370 (596)
...+.. +.+..+..+......+........+.+... ++... .....+ ..
T Consensus 251 ----~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---i~~~~g--~~ 304 (479)
T PRK10077 251 ----KHSLDH-----------------GRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPE---IFKTLG--AS 304 (479)
T ss_pred ----HHHHHH-----------------hhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHH---HHHHcC--CC
Confidence 000000 000000100000000000000011111111 00000 000011 01
Q ss_pred -ccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccC
Q 007604 371 -IPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKG 449 (596)
Q Consensus 371 -~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (596)
...........+..+++.++..++.||++|| +.+..+.++.+++++.+......
T Consensus 305 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r-----------~~~i~~~~~~~v~~~~l~~~~~~-------------- 359 (479)
T PRK10077 305 TDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-----------PLQIIGALGMAIGMFSLGTAFYT-------------- 359 (479)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-----------HHHHHhHHHHHHHHHHHHHHHhc--------------
Confidence 0112223334555666777777877777766 34666777777776665433210
Q ss_pred CcceehhHHHHHHHHHHHHHHHH-HhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCcc
Q 007604 450 QQVPLTIFIMLPQFVLMGTADAF-LEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWI 528 (596)
Q Consensus 450 ~~~~~~~~~li~~~~l~g~~~~~-~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~ 528 (596)
.....+.+...++.+.+.+. ..|..+.++.|.+|++.|++++|+.+..+.+++.+++.+.+.+.+ .+|+
T Consensus 360 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~-------~~~~ 429 (479)
T PRK10077 360 ---QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDK-------NSWL 429 (479)
T ss_pred ---CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHh-------ccch
Confidence 11222333344455555544 346778999999999999999999999999999999988886642 1232
Q ss_pred ccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007604 529 LNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYK 565 (596)
Q Consensus 529 ~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 565 (596)
.++. +....|++++++.++..++.+++.++.+++
T Consensus 430 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 463 (479)
T PRK10077 430 VAHF---HNGFSYWIYGCMGVLAALFMWKFVPETKGK 463 (479)
T ss_pred hhhc---cCccHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 2221 223456776776666666555555554433
No 20
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.93 E-value=8.8e-24 Score=228.68 Aligned_cols=371 Identities=10% Similarity=0.020 Sum_probs=224.6
Q ss_pred HHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCc
Q 007604 58 MYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQ 137 (596)
Q Consensus 58 ~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (596)
..+.+++|.+.++.+++.+.+.++..++.+++|+++||+ |||++++.+.++..++.++++++.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 345679999999999999999999999999999999998 999999999999998888887764
Q ss_pred cccccccchhHHHHH-HHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccc
Q 007604 138 DCRKASTLQLGTFFA-ALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDV 216 (596)
Q Consensus 138 ~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~ 216 (596)
+...+++ .|++.|++.+...+...+++.++++ ++ |+++.++.+.+..+|..++|.+++++.+.+
T Consensus 106 --------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 106 --------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred --------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 5555554 4688899998876777788889886 33 999999999999999999999999999889
Q ss_pred cchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccC
Q 007604 217 GWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGS 296 (596)
Q Consensus 217 g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (596)
|||++|++.++..+++.+..++.++....++..+.... .. .+.... . ++.......
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~------------~~--~~~~~~-----~-----~~~~~~~~~ 226 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSK------------EG--LPPDGS-----T-----KKLSKKSTA 226 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccc------------cc--CCCCCc-----c-----ccccccchh
Confidence 99999999887665554443333322111000000000 00 000000 0 000000000
Q ss_pred CcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHH-HHHHhhhhhhhhhcccceeeeeeccccccCCCcccccccc
Q 007604 297 TQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIP-ILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPAS 375 (596)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 375 (596)
.+..++.+. +..+.+.+...+. ..+....++......+.+... .... ....+.
T Consensus 227 ~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~------~g~s---~~~~g~ 280 (455)
T TIGR00892 227 EKINRFLDF-----------------SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD------KGVD---EYEAAF 280 (455)
T ss_pred hhhhhhcch-----------------HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH------cCCC---HHHHHH
Confidence 000000000 0011122221111 111111111111111222111 1111 112233
Q ss_pred cccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceeh
Q 007604 376 LTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLT 455 (596)
Q Consensus 376 ~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (596)
......+..+++.++..++.|+...+ ......+..+.++.+++++..... .+
T Consensus 281 ~~~~~~~~~~~~~~~~g~l~d~~~~~-------~~~~~~~~~~~~~~~l~~ll~~~~---------------------~~ 332 (455)
T TIGR00892 281 LLSIIGFVDIFARPSCGLIAGLKWIR-------PHVQYLFSFALLFNGLTHLLCALA---------------------GD 332 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccC-------HHHHHHHHHHHHHHHHHHHHHHHh---------------------ch
Confidence 44455666666677777755431111 011122233333333333333221 24
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCccc
Q 007604 456 IFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVC 535 (596)
Q Consensus 456 ~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~ 535 (596)
.+.++...++.|++.+...+...+++.+.+|++.+|+.+|+++....+|..+|+.+.+.+.+.. +
T Consensus 333 ~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~---------------g 397 (455)
T TIGR00892 333 YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDAT---------------K 397 (455)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhc---------------C
Confidence 5556667788899998889999999999999999999999999999999999999998876522 2
Q ss_pred chhHHHHHHHHHHHHHHH
Q 007604 536 HLDYYYAFFAILNVLNFV 553 (596)
Q Consensus 536 ~~~~~f~~~~~~~~v~~~ 553 (596)
++...|++.+++.+++.+
T Consensus 398 ~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 398 NYKYIFYASGSIVVSAGL 415 (455)
T ss_pred CcchHHHHhhHHHHHHHH
Confidence 344567766666555544
No 21
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=2.8e-23 Score=222.34 Aligned_cols=388 Identities=13% Similarity=0.065 Sum_probs=241.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHH
Q 007604 37 FVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIV 116 (596)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~ 116 (596)
.++...++..++.......+|.+.+ +++.++.+.|++.+.+.++..++.++.|+++||+ |||+++.++.++.+++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~ 98 (417)
T PRK10489 21 AVFIARFISIFGLGLLGVAVPVQIQ-MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIG 98 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHH
Confidence 3444455555555555556666654 6788999999999999999999999999999998 9999999988887777666
Q ss_pred HHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHH
Q 007604 117 LALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMF 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (596)
++...... ..+...+++.|++.|++.+...++..+++.|.+|+++ |+++.++.+.
T Consensus 99 ~~~~~~~~-------------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 153 (417)
T PRK10489 99 LALNAFLP-------------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITML 153 (417)
T ss_pred HHHHHHcC-------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHH
Confidence 54321100 0156677889999999988888888999999999875 9999999999
Q ss_pred HHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCch
Q 007604 197 SIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQ 276 (596)
Q Consensus 197 ~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (596)
..++|..+||.+++++.+..+|++.|++.++..+++.+..+..++..+.+++++++..+..+..
T Consensus 154 ~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------------- 217 (417)
T PRK10489 154 TVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPPQPREHPLRSLLAGF---------------- 217 (417)
T ss_pred HHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccccchHHHHHHH----------------
Confidence 9999999999999999888899999988776655555443333221110000000000000000
Q ss_pred hhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeee
Q 007604 277 ELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVK 356 (596)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (596)
+.+.+.+.+.......+............+.+ ..
T Consensus 218 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~ 251 (417)
T PRK10489 218 ---------------------------------------------RFLLASPVVGGIALLGGLLTMASAVRVLYPAL-AD 251 (417)
T ss_pred ---------------------------------------------HHHHcChHHHHHHHHHHHHHHHHhHHHhhHHH-HH
Confidence 00000111111111111111111111111111 11
Q ss_pred eeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhh
Q 007604 357 QGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYR 436 (596)
Q Consensus 357 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~ 436 (596)
+..+.+ ....+.+.....++.+++..+.+++ .+|. ++.+.+..+.++.+++++.....
T Consensus 252 ~~~g~~-------~~~~g~~~~~~~~g~~ig~~~~~~l----~~~~-------~~~~~l~~~~~~~~~~~~~~~~~---- 309 (417)
T PRK10489 252 EVWQMG-------AAQIGLLYAAVPLGAALGALTSGWL----AHSA-------RPGLLMLLSTLGSFLAVGLFGLM---- 309 (417)
T ss_pred hccCCC-------hhHhHHHHHHHHHHHHHHHHHHHHh----hhcc-------CcchHHHHHHHHHHHHHHHHHcc----
Confidence 101111 1112233344455555555555553 3331 12234566666666666555432
Q ss_pred hhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhh
Q 007604 437 LSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVS 516 (596)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~ 516 (596)
.+++......++.|++.+...+...+++.+.+|++.||+++|+++....+|..+|+.+.+.+.
T Consensus 310 -----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~ 372 (417)
T PRK10489 310 -----------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLG 372 (417)
T ss_pred -----------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHH
Confidence 244455566777888888888888899999999999999999999999999999999999987
Q ss_pred ccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccccccCC
Q 007604 517 DITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKAEV 568 (596)
Q Consensus 517 ~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~ 568 (596)
+.. +....++..++..++..++.+...+++++++++
T Consensus 373 ~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (417)
T PRK10489 373 AMM----------------TPVASASASGFGLLIIGVLLLLVLGELRRFRQT 408 (417)
T ss_pred HHh----------------chhhHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 532 223455555655555555555555555554443
No 22
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=4e-23 Score=220.77 Aligned_cols=172 Identities=13% Similarity=0.083 Sum_probs=145.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
+|+..+.+++..++..+....+. +....+++++|++..+.+++.+.+.++..+++++.|+++||+ |||+++..++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~-~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIG-FAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHH-HHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHH
Confidence 45555656665555556555444 444588999999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++.++++++. +...+++.|++.|++.+...|....++.|++|+++ |+++
T Consensus 84 ~~~~~~~~~~~------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~ 133 (412)
T TIGR02332 84 GIASTATMFAT------------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARA 133 (412)
T ss_pred HHHHHHHHHhc------------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHH
Confidence 99999988874 67789999999999999999999999999999875 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccc------cccchhhhHHHHHHHHHHHH
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQD------DVGWALGYGLPALGLAIAIA 234 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~------~~g~~~~f~~~~~~~~~~~~ 234 (596)
.++++....+|..+++.+++++.+ ..|||+.|++.++..++..+
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~ 183 (412)
T TIGR02332 134 NALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGV 183 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHH
Confidence 999999999999999999888753 36999999987765544333
No 23
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=4.2e-23 Score=222.19 Aligned_cols=164 Identities=14% Similarity=0.053 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
.+..++..++..+..+.....++.+. +++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHH
Confidence 33444445555555555556666554 57999999999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
++++.+. +...+++.|++.|++.|...+...+++.|++|+++ |+++.+++
T Consensus 103 ~~~~~~~------------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~ 152 (434)
T PRK11663 103 ILFGFSS------------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIW 152 (434)
T ss_pred HHHHHHh------------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHH
Confidence 8888764 67788888999999999989999999999999876 99999999
Q ss_pred HHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHH
Q 007604 195 MFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLA 230 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~ 230 (596)
+.+.++|..++|.+.+++.+.+|||+.|++.++..+
T Consensus 153 ~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~ 188 (434)
T PRK11663 153 NTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAI 188 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 999999999999999999888999999988776544
No 24
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=5.1e-23 Score=216.12 Aligned_cols=351 Identities=12% Similarity=0.082 Sum_probs=215.9
Q ss_pred HHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 007604 54 SNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCND 133 (596)
Q Consensus 54 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 133 (596)
......+++++|++.++.+++.+.+.+++.+++++.|+++||+ |||+++..++.....+.+ .....
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~------------ 76 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP------------ 76 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh------------
Confidence 4444456779999999999999999999999999999999998 999987765555544433 22221
Q ss_pred CCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcc
Q 007604 134 INSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQ 213 (596)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~ 213 (596)
.+...+++.|+++|+|.+. .+......+|++|+++ |+++.++.+.+..+|..+++.+++++.
T Consensus 77 -----------~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~~l~ 138 (368)
T TIGR00903 77 -----------FNYEWLLACQLLAALGQPF-LLNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGLKIY 138 (368)
T ss_pred -----------ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1678899999999999986 4555566799999875 999999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCccc
Q 007604 214 DDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYR 293 (596)
Q Consensus 214 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (596)
+.+|||+.|++.++..++..++.+...|+.++.+++.....+..+
T Consensus 139 ~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~~~~~~----------------------------------- 183 (368)
T TIGR00903 139 TAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGFKDAVK----------------------------------- 183 (368)
T ss_pred HccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcchHHHHH-----------------------------------
Confidence 889999999886655444433333322221111100000000000
Q ss_pred ccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCCCcccccc
Q 007604 294 IGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPP 373 (596)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 373 (596)
.+ . +-.++++.....+..++....++....+.++++... ..+ ...
T Consensus 184 -------~~---~---------------~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~--g~s--------~~~ 228 (368)
T TIGR00903 184 -------EF---G---------------ALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPA--GLE--------DIA 228 (368)
T ss_pred -------HH---H---------------HHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCC--------hHH
Confidence 00 0 000111222222333444555555555555554221 111 111
Q ss_pred cccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcce
Q 007604 374 ASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVP 453 (596)
Q Consensus 374 ~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (596)
+ ....+..+.+.....++.|++.||.. +...+....++.++.+......
T Consensus 229 ~---~~~~l~~~~g~~g~~~~~d~~~r~~~-------r~~~~~~~~~~~a~~~~~~~~~--------------------- 277 (368)
T TIGR00903 229 G---DAVALAILAGLIGVAVIPDRVARAGL-------RSIYIRAAALLIAAFFLALAFE--------------------- 277 (368)
T ss_pred H---HHHHHHHHHHHHHHHHhhHHhhhhhh-------HHHHHHHHHHHHHHHHHHHHHc---------------------
Confidence 1 11222223333334555666655421 1111222233333333333221
Q ss_pred ehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCc
Q 007604 454 LTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLN 533 (596)
Q Consensus 454 ~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~ 533 (596)
.+....+....+.+++.....+..+++..|.+|++.||+++|+.+...++++..++.+.+.+..
T Consensus 278 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---------------- 341 (368)
T TIGR00903 278 LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---------------- 341 (368)
T ss_pred cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc----------------
Confidence 1222233334445555666667788999999999999999999999999999999998887641
Q ss_pred ccchhHHHHHHHHHHHHHHHHH
Q 007604 534 VCHLDYYYAFFAILNVLNFVFF 555 (596)
Q Consensus 534 ~~~~~~~f~~~~~~~~v~~~~~ 555 (596)
+....|.++++..+++.+..
T Consensus 342 --~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 342 --SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred --CHHHHHHHHHHHHHHHHHHH
Confidence 24567887777777766554
No 25
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.93 E-value=5e-23 Score=216.92 Aligned_cols=382 Identities=13% Similarity=0.131 Sum_probs=233.0
Q ss_pred HHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 007604 54 SNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCND 133 (596)
Q Consensus 54 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 133 (596)
+....++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++.
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 80 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------ 80 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc------------
Confidence 4444567889999999999999999999999999999999998 999999999999999988888764
Q ss_pred CCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcc
Q 007604 134 INSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQ 213 (596)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~ 213 (596)
+.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+++++.
T Consensus 81 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~ 142 (399)
T TIGR00893 81 ------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWIL 142 (399)
T ss_pred ------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999875 999999999999999999999999988
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCccc
Q 007604 214 DDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYR 293 (596)
Q Consensus 214 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (596)
+..+|++.|++.++..++..+..+...++.++++....+..+. .. .++ . +.+..++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~-~-------------~~~~~~~~--- 199 (399)
T TIGR00893 143 IHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKY--IV----VGG-L-------------LAEQQGKG--- 199 (399)
T ss_pred HhCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHh--hc----chh-h-------------cccccccc---
Confidence 8899999999877665544444333333221111100000000 00 000 0 00000000
Q ss_pred ccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHH-HHHHhhhhhhhhhcccceeeeeeccccccCCCccccc
Q 007604 294 IGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIP-ILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIP 372 (596)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 372 (596)
+..+. +. ...+..+.+++..... .++............ +.+..+....+ ...
T Consensus 200 -~~~~~----------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~ 252 (399)
T TIGR00893 200 -PSTPK----------------KY--QIKELLKDRRVWGLALGQFLVNIGLGFFLTWF-PTYLVQERGLS-------ILE 252 (399)
T ss_pred -ccCCC----------------cc--chHHHhcCHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHhccc-------HHH
Confidence 00000 00 0000111122222211 111112111111111 11111111111 112
Q ss_pred ccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcc
Q 007604 373 PASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQV 452 (596)
Q Consensus 373 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (596)
.+.......+..+++.++..++.||++||... ....... ..+..+.......... .
T Consensus 253 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~-----------------~ 308 (399)
T TIGR00893 253 AGFMASLPGIVGFIGMILGGRLSDLLLRRGKS------LVFARKT-AIIAGLVLSLLMFATN-----------------Y 308 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc------hhHHHHH-HHHHHHHHHHHHHHhc-----------------c
Confidence 23445556667778888888988888887311 0000000 1111111111111100 0
Q ss_pred eehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCC
Q 007604 453 PLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNL 532 (596)
Q Consensus 453 ~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~ 532 (596)
..+.+..+ ...+.+.......+..+++..|..|++.||+++|+.+....+|+.+++.+.+.+.+..
T Consensus 309 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~------------- 374 (399)
T TIGR00893 309 VNIPYAAL-ALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT------------- 374 (399)
T ss_pred chhHHHHH-HHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC-------------
Confidence 01222222 2233333333378889999999999999999999999999999999999999886522
Q ss_pred cccchhHHHHHHHHHHHHHHHHHH
Q 007604 533 NVCHLDYYYAFFAILNVLNFVFFL 556 (596)
Q Consensus 533 ~~~~~~~~f~~~~~~~~v~~~~~~ 556 (596)
+++...|++.++..+++.+.++
T Consensus 375 --g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 375 --GSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred --CchhHHHHHHHHHHHHHHHHHH
Confidence 1245667777776666655544
No 26
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=8.5e-24 Score=229.76 Aligned_cols=150 Identities=11% Similarity=0.012 Sum_probs=124.2
Q ss_pred HHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 007604 55 NLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDI 134 (596)
Q Consensus 55 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 134 (596)
.....+.+++|++..+.|++.+.+.+++.++++++|+++||+ |||+++.++.++..++..+.+.....
T Consensus 50 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~----------- 117 (467)
T PRK09556 50 AAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS----------- 117 (467)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 334567789999999999999999999999999999999999 99999998888877776665543100
Q ss_pred CCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccc
Q 007604 135 NSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQD 214 (596)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~ 214 (596)
...+...+++.|++.|++.+...|....+++|++|+++ |+++++++..+.++|.++++.+..++..
T Consensus 118 --------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 118 --------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGAN 183 (467)
T ss_pred --------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHH
Confidence 00278889999999999999999999999999999987 9999999999999999999888776654
Q ss_pred cc---cchhhhHHHHHHHH
Q 007604 215 DV---GWALGYGLPALGLA 230 (596)
Q Consensus 215 ~~---g~~~~f~~~~~~~~ 230 (596)
.. +|+..|.+.++..+
T Consensus 184 ~~~~~~~~~~f~~~g~~~~ 202 (467)
T PRK09556 184 YFFDGHVIGMFIFPSIIAL 202 (467)
T ss_pred hhccCcchhHHHHHHHHHH
Confidence 32 58888877665443
No 27
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=4e-23 Score=215.84 Aligned_cols=358 Identities=11% Similarity=0.037 Sum_probs=235.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHH
Q 007604 38 VVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVL 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~ 117 (596)
++...++..++.......+|.|.. +++.++.+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 445555666665556666777766 5899999999999999999999999999999998 99999999998888887777
Q ss_pred HHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHH
Q 007604 118 ALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFS 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (596)
....... ..+.+.++++|++.|++.+...+...+++.|++|+++ |++.+++.+..
T Consensus 82 ~~~~~~~-------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 136 (365)
T TIGR00900 82 PFVALLG-------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAV 136 (365)
T ss_pred HHHHHcC-------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHH
Confidence 6653111 0267788899999999999999999999999999885 99999999999
Q ss_pred HHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchh
Q 007604 198 IFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQE 277 (596)
Q Consensus 198 ~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (596)
..+|..+||.+++++.+..||++.|++.++..+++.+..+..+.+.++++++++..++..+..
T Consensus 137 ~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 199 (365)
T TIGR00900 137 RSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDT----------------- 199 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHH-----------------
Confidence 999999999999999888999999988877655555444433221111100000000000000
Q ss_pred hhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHH-HHHhhhhhhhhhcccceeee
Q 007604 278 LYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPI-LVATFVPSTMLAQINTLFVK 356 (596)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 356 (596)
.+. + +...+.+.+...+.. .+....+........+++..
T Consensus 200 -------------------------~~~----------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (365)
T TIGR00900 200 -------------------------REG----------I-----KFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQS 239 (365)
T ss_pred -------------------------HhH----------H-----HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 000 0 000011111111111 11111111111111122211
Q ss_pred eeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhh
Q 007604 357 QGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYR 436 (596)
Q Consensus 357 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~ 436 (596)
+..+.+ ....+.......++.+++.++..++.++..|| +.+..+..+.++++....+..
T Consensus 240 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~--- 298 (365)
T TIGR00900 240 KYLGRG-------STHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----------ALMTGAIFVIGLAILVVGLTP--- 298 (365)
T ss_pred HHhCCc-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----------HHHHHHHHHHHHHHHHHHhhc---
Confidence 101111 11123334445555666666666654444333 334455555555555544421
Q ss_pred hhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhh
Q 007604 437 LSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVS 516 (596)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~ 516 (596)
+ +.+...+..++.|++.+...+...++..|.+|++.||+++|+.+....++..+++.+.+.+.
T Consensus 299 ----------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 299 ----------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLA 361 (365)
T ss_pred ----------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 35556667788999999999999999999999999999999999999999999999998876
Q ss_pred c
Q 007604 517 D 517 (596)
Q Consensus 517 ~ 517 (596)
+
T Consensus 362 ~ 362 (365)
T TIGR00900 362 D 362 (365)
T ss_pred H
Confidence 4
No 28
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=1.7e-22 Score=215.50 Aligned_cols=341 Identities=11% Similarity=0.062 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 007604 48 AYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLK 127 (596)
Q Consensus 48 ~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 127 (596)
+.......++. +.+++|.++.+.++..+.+.++..++.++.|+++||+ |||++++++..+..++.+++..+.
T Consensus 28 ~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~------ 99 (406)
T PRK15402 28 ANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ------ 99 (406)
T ss_pred hhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc------
Confidence 33334444444 4578999999999999999999999999999999998 999999999999888888877663
Q ss_pred CCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhh
Q 007604 128 PPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNT 207 (596)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~ 207 (596)
+...+++.|++.|++.+...+...+++.|.+|+++ |.+..++......+|..++|.
T Consensus 100 ------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~ 155 (406)
T PRK15402 100 ------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALMANVALLAPLLGPL 155 (406)
T ss_pred ------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHHHHHHHHHHHHHHH
Confidence 67778899999999999888899999999999875 888888888888889999999
Q ss_pred hhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhh
Q 007604 208 VLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYA 287 (596)
Q Consensus 208 ~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (596)
+++++.+..+||++|++.++..++..+..+...|+.+++++++.+..+..+..
T Consensus 156 i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 208 (406)
T PRK15402 156 VGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDY--------------------------- 208 (406)
T ss_pred HHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHH---------------------------
Confidence 99999888899999988776655554433332222111100000000000000
Q ss_pred hcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHH-HHhhhhhhhhhcccceeeeeeccccccCC
Q 007604 288 QRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPIL-VATFVPSTMLAQINTLFVKQGTTLDRAIG 366 (596)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 366 (596)
..+.+.+.+....... +............+.++ .+. ....
T Consensus 209 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~----~g~~ 249 (406)
T PRK15402 209 ----------------------------------KLVLKNRRFVAGALALGLVSLPLLAWIALSPVIL-ISG----EQLS 249 (406)
T ss_pred ----------------------------------HHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHH-HHH----hCCC
Confidence 0000111111111111 11111111111111111 110 0110
Q ss_pred CcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCcc
Q 007604 367 SSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIV 446 (596)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (596)
....+.......++.+++.++.+++.||..+| +.+.++.++.+++.+........
T Consensus 250 ---~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~----------- 304 (406)
T PRK15402 250 ---SYEYGLLQVPVFGALIAGNLTLARLTSRRPLR-----------SLIRMGLWPMVAGLLLAALATVI----------- 304 (406)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----------HHHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 11111122223334555556666655554444 44666777676666655543210
Q ss_pred ccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhc
Q 007604 447 EKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSD 517 (596)
Q Consensus 447 ~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~ 517 (596)
...+.++++...++.+++.+...+........ .+++.||+..+++++.+.++..+|+.+.+.+.+
T Consensus 305 -----~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 305 -----SSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred -----ccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 01245566777888999998888777666544 445899999999999999999999999988764
No 29
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.92 E-value=2.8e-22 Score=215.64 Aligned_cols=175 Identities=17% Similarity=0.138 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---CChhhhhhHHH---HHHHHHHHhhhhhHHHhhhhcchhHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLH---HGTVKSANNVT---NWGGTIWVTPIFGAGVAEAYLGRYWTFVIAF 107 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~~~~~~~~~~~---~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~ 107 (596)
.+....+..+++.+.+.. .+++..++.++++ .+..+.+.+.+ ...++..++++++|+++||+ |||+++.+++
T Consensus 23 ~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~ 100 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISV 100 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHH
Confidence 344444556666666554 5666678888874 45554444444 44455559999999999999 9999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhh
Q 007604 108 FFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHK 187 (596)
Q Consensus 108 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 187 (596)
+++.++.++++++++... .+......+++.|+++|+|.|+..|...+++.|++|+++ |
T Consensus 101 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------r 158 (432)
T PRK10406 101 CMMCFGSLVIACLPGYET----------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------K 158 (432)
T ss_pred HHHHHHHHHHhhcCCchh----------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------c
Confidence 999999999887642110 000134568899999999999999999999999999986 9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhcc--------ccccchhhhHHHHHHHHHH
Q 007604 188 LSFFNWWMFSIFFGTLLGNTVLVYIQ--------DDVGWALGYGLPALGLAIA 232 (596)
Q Consensus 188 ~~~~~~~~~~~~ig~~l~~~~~~~l~--------~~~g~~~~f~~~~~~~~~~ 232 (596)
+.+.++.+...+.|..+++.+...+. ..+|||++|++.++..++.
T Consensus 159 g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 159 GFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 99999888888888888876554432 2579999999877654443
No 30
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.92 E-value=9.3e-23 Score=217.33 Aligned_cols=380 Identities=14% Similarity=0.099 Sum_probs=246.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhh-----hhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVK-----SANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAF 107 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~-----~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~ 107 (596)
|....+++..++..+++......+|.|.+ ++|.+..+ .+.+.+++.++..++.++.|+++||+ |||+++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 91 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHH
Confidence 45666667777778887777888888886 58888654 47888899999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhh
Q 007604 108 FFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHK 187 (596)
Q Consensus 108 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 187 (596)
++..++.+++..+. +.+.+++.|++.|++.+ ..+....++.|.+|+++ |
T Consensus 92 ~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~ 140 (408)
T PRK09874 92 LGMGIVMVLMGLAQ------------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------S 140 (408)
T ss_pred HHHHHHHHHHHHHh------------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------h
Confidence 88888887776653 67788899999999865 45777888999998875 9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhc
Q 007604 188 LSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKR 267 (596)
Q Consensus 188 ~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (596)
+++.++.+...++|..++|.+++.+.+..+|++.|++.++..++..+..+...++..+..++++. .+. +.. .
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~---~--- 212 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM-LHM-REV---V--- 212 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh-hHH-HHH---H---
Confidence 99999999999999999999999998888999999988776555544333322221110000000 000 000 0
Q ss_pred CCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHH-HHHhhhhhhh
Q 007604 268 NVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPI-LVATFVPSTM 346 (596)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~-~~~~~~~~~~ 346 (596)
+ ..++.+.....+.. +.........
T Consensus 213 ---------------------------------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (408)
T PRK09874 213 ---------------------------------T---------------------SLKNPKLVLSLFVTTLIIQVATGSI 238 (408)
T ss_pred ---------------------------------H---------------------hCcCCchHHHHHHHHHHHHHHHHHH
Confidence 0 00011111111111 1111111111
Q ss_pred hhcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHH
Q 007604 347 LAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIM 426 (596)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~ 426 (596)
....+.+....... ... .....+.+.....+..++..+..+++.||++|| +.+..+.++.++++
T Consensus 239 ~~~~~~~~~~~~~~-~~~----~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~~~~~~~ 302 (408)
T PRK09874 239 APILTLYVRELAGN-VSN----IAFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----------KILITALIFSVLLL 302 (408)
T ss_pred HHHHHHHHHHHhcc-chH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----------hhHHHHHHHHHHHH
Confidence 11111111111000 000 000112222334455566667777766666655 23445555555554
Q ss_pred HHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHH
Q 007604 427 VIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNF 506 (596)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 506 (596)
+..... .+.+.+.+..++.|++.+...|...+++.+..|++.+|+.+|+++....+|..
T Consensus 303 ~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 361 (408)
T PRK09874 303 IPMSFV---------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNV 361 (408)
T ss_pred HHHHHh---------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHH
Confidence 443332 13445555667889999999999999999999999999999999999999999
Q ss_pred HHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhh
Q 007604 507 LSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAK 560 (596)
Q Consensus 507 lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 560 (596)
+|+.+.+.+.+. .++...|++.+++.+++.++.+...+
T Consensus 362 ~gp~~~G~l~~~----------------~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 362 TGPLMGAAISAN----------------YGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred hhHHHHHHHHhh----------------cchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988642 23466788878777777666655443
No 31
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.92 E-value=6e-23 Score=222.32 Aligned_cols=402 Identities=14% Similarity=0.149 Sum_probs=227.3
Q ss_pred CChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccc
Q 007604 66 HGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTL 145 (596)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (596)
.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++...... .
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~---------------------~ 125 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFA---------------------L 125 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccc---------------------c
Confidence 3389999999999999999999999999998 99999999999999998888665310 1
Q ss_pred hhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhh---hhccccccchhhh
Q 007604 146 QLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVL---VYIQDDVGWALGY 222 (596)
Q Consensus 146 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~---~~l~~~~g~~~~f 222 (596)
+.+.++++|++.|+|.+...+...+++.|.+|+++ |+++.++.+.+.++|..+++.++ +...+..+||++|
T Consensus 126 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f 199 (481)
T TIGR00879 126 SVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPL 199 (481)
T ss_pred chHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHH
Confidence 45578899999999999999999999999999886 99999999999999999999888 6666778999999
Q ss_pred HHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhh
Q 007604 223 GLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRF 302 (596)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (596)
++.++..++.++..++.++..+....+++ .++..+.. ++...............+..+.......+....
T Consensus 200 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 269 (481)
T TIGR00879 200 GLQLIPAGLLFLGLFFLPESPRWLVGKGR-VEEARKSL----ARLRGTSGEDKELLDELELIDIKRSIEKRSVQP----- 269 (481)
T ss_pred HHHHHHHHHHHHHHhcCCCChHHHHHcCC-hHHHHHHH----HHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccc-----
Confidence 99766555554444443322111000111 11111111 000000000000000000000000000000000
Q ss_pred hhhhhhhcCCCCCcccccch-hhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCCCcccc-cccccccch
Q 007604 303 FNKAAVKTGATNPWILCSVS-QVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKI-PPASLTGFV 380 (596)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~-~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~ 380 (596)
.|...... +....+.+...+...+.............+.+.. ..+ ++. .........
T Consensus 270 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g--~~~~~~~~~~~~~ 328 (481)
T TIGR00879 270 ------------SWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE-------NAG--VSTDHAFLVSIIV 328 (481)
T ss_pred ------------cHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH-------HcC--CCchHHHHHHHHH
Confidence 00000000 0000111111111101000000000000111111 111 111 123334445
Q ss_pred hHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHH
Q 007604 381 TLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIML 460 (596)
Q Consensus 381 ~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 460 (596)
.+..+++.++..++.||++|| +.+.+++++.+++++...+......+. .....+...+.
T Consensus 329 ~~~~~~~~~~~g~l~d~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 387 (481)
T TIGR00879 329 GAVNFAFTFVAIFLVDRFGRR-----------PLLLIGAAGMAICLFVLGILGASFVTG----------SSKSSGNVAIV 387 (481)
T ss_pred HHHHHHHHHHHHHHHHHhcch-----------HHHHHHHHHHHHHHHHHHHHhhcccCC----------cccchhHHHHH
Confidence 556667777777877777666 335556666666665555321100000 00001222233
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHH
Q 007604 461 PQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYY 540 (596)
Q Consensus 461 ~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~ 540 (596)
...++.+.......+....++.|..|++.|++++|+.+....+|+++++.+.+.+.+.. ++.+.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~----------------~~~~~ 451 (481)
T TIGR00879 388 FILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI----------------GVGGV 451 (481)
T ss_pred HHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------Cccce
Confidence 33333333333445667778899999999999999999999999999999998876421 23456
Q ss_pred HHHHHHHHHHHHHHHHHHhhccc
Q 007604 541 YAFFAILNVLNFVFFLVVAKFYV 563 (596)
Q Consensus 541 f~~~~~~~~v~~~~~~~~~~~~~ 563 (596)
|++.+++.+++.++.+++.++.+
T Consensus 452 f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 452 FIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred ehhHHHHHHHHHHHHheecccCC
Confidence 77777777777666665555443
No 32
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.92 E-value=1.2e-22 Score=215.81 Aligned_cols=175 Identities=15% Similarity=0.229 Sum_probs=149.3
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHH
Q 007604 27 SKRGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIA 106 (596)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 106 (596)
..+.+|+.+...++..+...+..+......+ .+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 3456677777777777777777766655555 56789999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhh
Q 007604 107 FFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAH 186 (596)
Q Consensus 107 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 186 (596)
.++..++.+++.++. +...+++.|++.|++.+...+...+++.|.+|+++
T Consensus 84 ~~~~~~~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------ 133 (405)
T TIGR00891 84 IVLFSAGTLACGFAP------------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------ 133 (405)
T ss_pred HHHHHHHHHHHHHhc------------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------
Confidence 999999888887764 67788899999999999999999999999999886
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhcccccc--chhhhHHHHHHHHHHH
Q 007604 187 KLSFFNWWMFSIFFGTLLGNTVLVYIQDDVG--WALGYGLPALGLAIAI 233 (596)
Q Consensus 187 r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g--~~~~f~~~~~~~~~~~ 233 (596)
|+++.++.+....+|..+++.+.+.+.+..+ ||+.|++.++..++.+
T Consensus 134 ~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 134 RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888876655 9999987665544443
No 33
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=6e-23 Score=213.58 Aligned_cols=350 Identities=15% Similarity=0.207 Sum_probs=228.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Q 007604 39 VVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLA 118 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~ 118 (596)
++..++..+........++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++.+++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 3455666666666667777688899999999999999999999999999999999998 999999999999999866655
Q ss_pred HHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHH
Q 007604 119 LSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSI 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 198 (596)
++. +.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.+...
T Consensus 81 ~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~ 130 (352)
T PF07690_consen 81 FAS------------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGF 130 (352)
T ss_dssp HHC------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHH
T ss_pred hhh------------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchh
Confidence 542 55689999999999999999999999999999986 999999999999
Q ss_pred HHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhh
Q 007604 199 FFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQEL 278 (596)
Q Consensus 199 ~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (596)
++|..++|.+++++.+..+||+.|++.++..++..++.....++.+++++++++.+ ..
T Consensus 131 ~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~--------------------~~-- 188 (352)
T PF07690_consen 131 SLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKE--------------------SE-- 188 (352)
T ss_dssp HHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTT--------------------TT--
T ss_pred hhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccc--------------------cc--
Confidence 99999999999999988999999999888776665543333322111111110000 00
Q ss_pred hhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHH-hHHHHHHHhhhhhhhhhcccceeeee
Q 007604 279 YELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQML-AMIPILVATFVPSTMLAQINTLFVKQ 357 (596)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (596)
... +.+..+ .+ +...+.+.+. .....+.....+.......+. +..+
T Consensus 189 -~~~----------~~~~~~----------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 235 (352)
T PF07690_consen 189 -SKK----------PKPLKP----------------GF-----KSLFKNPVLWILLIAFFLFFFVFSGFSFFLPL-YLQE 235 (352)
T ss_dssp ---H----------HHCCCH-----------------C-----THHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HCCH
T ss_pred -ccc----------cccccc----------------cc-----ccccccchhhhhhhhhhHHHHHHHHhhcccch-hhhh
Confidence 000 000000 00 0111222121 111111111122222222222 1111
Q ss_pred eccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007604 358 GTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRL 437 (596)
Q Consensus 358 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~ 437 (596)
..+.+ + ....+.......+..+++.++.+++.||+.+| +...+......++.+...+...
T Consensus 236 ~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~--- 295 (352)
T PF07690_consen 236 VLGFS---G---PSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----------RRLLIAILLLILGALGLLLLPF--- 295 (352)
T ss_dssp HHHCC---T---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHHCCSHH---
T ss_pred ccCCC---H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----------HHHHHHHHHHHHHHHHHHHHHH---
Confidence 11111 0 01122334445555556667777766665544 2233333334433333332211
Q ss_pred hhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHh
Q 007604 438 SVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSS 509 (596)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~ 509 (596)
..+..+.+...++.|++.+...+...++..+.+|++.||++.|+.+....+|..+||
T Consensus 296 ---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 296 ---------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp ---------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 124455666778899999999999999999999999999999999999999999886
No 34
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=1.3e-22 Score=222.43 Aligned_cols=181 Identities=19% Similarity=0.125 Sum_probs=134.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----cCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDK-----LHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAF 107 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~ 107 (596)
+.+....+..+...+....+....+. +.++ .+.+..+.+++.+.+.++..++.+++|+++||+ |||+++.++.
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~ 93 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKM-LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHH
Confidence 34444444444444444333333443 3322 234566778999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhh
Q 007604 108 FFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHK 187 (596)
Q Consensus 108 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 187 (596)
++..++.++++++.+.. ...+...++++|++.|++.|+..+..+.++.|.+|+++ |
T Consensus 94 ~~~~v~~~~~~~~~~~~------------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------R 149 (502)
T TIGR00887 94 IIMIIATVASGLSPGSS------------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------R 149 (502)
T ss_pred HHHHHHHHHHHHccCcc------------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------H
Confidence 99999988887653100 00136789999999999999999999999999999997 9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhccc-----------------------cccchhhhHHHHHHHHHHHHHHHhc
Q 007604 188 LSFFNWWMFSIFFGTLLGNTVLVYIQD-----------------------DVGWALGYGLPALGLAIAIAIFLAG 239 (596)
Q Consensus 188 ~~~~~~~~~~~~ig~~l~~~~~~~l~~-----------------------~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (596)
+++.++.+....+|..+++.+...+.. .++||++|.+.++..++..+..+..
T Consensus 150 g~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~l 224 (502)
T TIGR00887 150 GAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTI 224 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999988877654321 2479999988776655554443333
No 35
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=2e-22 Score=214.04 Aligned_cols=358 Identities=13% Similarity=0.076 Sum_probs=229.6
Q ss_pred HHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 007604 48 AYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLK 127 (596)
Q Consensus 48 ~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 127 (596)
.++.+...+| .+++++|.|..+.+++.+.+.++..+++++.|+++||+ |||+++..++.++.++.+++++++
T Consensus 24 ~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~------ 95 (393)
T PRK09705 24 LLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP------ 95 (393)
T ss_pred hhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc------
Confidence 3344444455 56779999999999999999999999999999999998 999999999999999999999875
Q ss_pred CCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhh
Q 007604 128 PPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNT 207 (596)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~ 207 (596)
+...++++|+++|+|.+...+....++.+++| ++ |+.+.+.+..+.+.|..+|+.
T Consensus 96 ------------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g~~ 150 (393)
T PRK09705 96 ------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLGAA 150 (393)
T ss_pred ------------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHHHH
Confidence 67788999999999999999999999999997 43 999999999999999999999
Q ss_pred hhhhccccc-cchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHh
Q 007604 208 VLVYIQDDV-GWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYY 286 (596)
Q Consensus 208 ~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (596)
+++++.+.. +||..+.+.++..++.+...+...++.++++++++
T Consensus 151 ~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 195 (393)
T PRK09705 151 ITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHKTT----------------------------------- 195 (393)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCC-----------------------------------
Confidence 998887764 79988766544433333222222111110000000
Q ss_pred hhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCC
Q 007604 287 AQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIG 366 (596)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 366 (596)
.+ .. +..++.+.....+...+....++....+.+.+...+ ..+
T Consensus 196 ----------~~----------------~~-----~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~--g~s---- 238 (393)
T PRK09705 196 ----------TT----------------PV-----RVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEI--GAS---- 238 (393)
T ss_pred ----------cC----------------Cc-----ccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCC----
Confidence 00 00 000111111111122222233333333333333221 111
Q ss_pred CcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCcc
Q 007604 367 SSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIV 446 (596)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (596)
....+.......++.+++.++.+++.||.++| +.+.+++.+.+++.+......
T Consensus 239 ---~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----------~~~~~~~~l~~~~~~~~~~~~------------- 291 (393)
T PRK09705 239 ---AQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----------KLLMLALVLQLVGFCGFIWLP------------- 291 (393)
T ss_pred ---hhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----------HHHHHHHHHHHHHHHHHHHcc-------------
Confidence 11223344555666667766766655554443 335556666665554443221
Q ss_pred ccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhcc-chhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCC
Q 007604 447 EKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAP-ESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHK 525 (596)
Q Consensus 447 ~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~ 525 (596)
.+...+ ..++.+++.+...|.......+..| ++.+|+.+|+.+....++..+++.+.+++.+.+
T Consensus 292 -------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~------ 356 (393)
T PRK09705 292 -------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS------ 356 (393)
T ss_pred -------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 111111 2245577777777777777777774 678999999999999999999999999987643
Q ss_pred CccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007604 526 GWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKF 561 (596)
Q Consensus 526 ~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~ 561 (596)
+.+...|.+.++..++..+..+.+.++
T Consensus 357 ---------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 357 ---------GNYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 123345555555555555555554443
No 36
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.92 E-value=2.8e-22 Score=218.17 Aligned_cols=174 Identities=11% Similarity=0.036 Sum_probs=132.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
+++.++......++..+..+.....++ ++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLP-IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 444555555555555555555544443 66789999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++.++.+++. +...+++.|++.|++.+... ....+++|++|+++ |+++
T Consensus 112 ~~~~~~~~~~~------------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------rg~a 160 (476)
T PLN00028 112 APAVFCMSLVS------------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------VGTA 160 (476)
T ss_pred HHHHHHHHHhc------------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------eeHH
Confidence 88888777764 66678888999999988654 35567899999886 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcc----c-----cccchhhhHHHHHHHHHHHHHHH
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQ----D-----DVGWALGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~----~-----~~g~~~~f~~~~~~~~~~~~~~~ 237 (596)
.++.+...++|+.+++.+.+.+. + ..|||+.|++.+++.++..+..+
T Consensus 161 ~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 161 NGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 99988777888877766554432 1 25899999988766544443333
No 37
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.92 E-value=4.6e-23 Score=216.19 Aligned_cols=338 Identities=10% Similarity=0.001 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 007604 49 YHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKP 128 (596)
Q Consensus 49 ~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 128 (596)
.|.. +.+..++.+++|++..+.+++.+++.++..+++++.|+++||+ |||+++.++.++..++.++++++.
T Consensus 19 ~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------- 89 (377)
T TIGR00890 19 VYTW-TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------- 89 (377)
T ss_pred Hhhh-hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH-------
Confidence 4433 4455678889999999999999999999999999999999998 999999999999999998888875
Q ss_pred CCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhh
Q 007604 129 PPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTV 208 (596)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~ 208 (596)
+...++++|++.|++.+...+.......+++|++ |+++.++.....++|..+++.+
T Consensus 90 -----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~ 145 (377)
T TIGR00890 90 -----------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPDK-------RGLASGIIIGGYGLGSFILSPL 145 (377)
T ss_pred -----------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcc-------cHHHHHHHHHhcchhHhHHHHH
Confidence 7888899999999999988888888888888743 9999999999999998877667
Q ss_pred hhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhh
Q 007604 209 LVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQ 288 (596)
Q Consensus 209 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (596)
.+.+.+..|||+.|++.++..++..+..+...++.++++.+++. +.. .
T Consensus 146 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~----~-------- 193 (377)
T TIGR00890 146 ITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNI--------------------EVS----V-------- 193 (377)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCc--------------------ccc----h--------
Confidence 77777778999999988766554443333222211110000000 000 0
Q ss_pred cCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCCCc
Q 007604 289 RGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSS 368 (596)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 368 (596)
+.... .+ ..++++........+........... ....+. + +....
T Consensus 194 ---------~~~~~---~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~----~~~~~-- 238 (377)
T TIGR00890 194 ---------KDYTV---WE---------------MLRTPQFWVLYLSFFLNAVSGLLLIG-LYKPYG-Q----SLGLS-- 238 (377)
T ss_pred ---------hhhhH---HH---------------HHcCccHHHHHHHHHHHhHHHHHHHH-HHHHHH-H----HcCCC--
Confidence 00000 00 00011111111111111111111111 111111 1 11111
Q ss_pred ccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCcccc
Q 007604 369 FKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEK 448 (596)
Q Consensus 369 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (596)
....+.......+..+++.++..++.||++||+ .+.++.++.+++.+......
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----------~~~~~~~~~~~~~~~~~~~~--------------- 291 (377)
T TIGR00890 239 -DGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK-----------TMSIVFGISAVGMAAMLFIP--------------- 291 (377)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----------hhhHHHHHHHHHHHHHHHcc---------------
Confidence 111233455566777788888888888877662 25556666666655544321
Q ss_pred CCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhc
Q 007604 449 GQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSD 517 (596)
Q Consensus 449 ~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~ 517 (596)
..+.+.++...++.+++.+...+....+..|..|++.||+..|+.+....+|..+++.+.+.+.+
T Consensus 292 ----~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 292 ----MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred ----cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11222233334556666666666677888999999999999999999999999999999998864
No 38
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=1.1e-21 Score=208.45 Aligned_cols=173 Identities=11% Similarity=0.109 Sum_probs=148.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHH
Q 007604 29 RGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFF 108 (596)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 108 (596)
|..|+..+.+.+..++.....|.....+|. +.+++|.++.+.++..+.+.++..+++++.|+++||+ |||++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~ 93 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAV 93 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHH
Confidence 345666666666666665666666666665 4568999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhh
Q 007604 109 FYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKL 188 (596)
Q Consensus 109 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (596)
+..++.+++.++. +.+.+++.|++.|++.+...|...+++.|++|+++ |+
T Consensus 94 ~~~~~~~~~~~~~------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~ 143 (394)
T PRK10213 94 LLTLSCLLVSFAN------------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VP 143 (394)
T ss_pred HHHHHHHHHHHHC------------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HH
Confidence 9999988887763 78899999999999999999999999999999885 99
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHH
Q 007604 189 SFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAI 233 (596)
Q Consensus 189 ~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 233 (596)
++.++.....++|..+||.+++++.+.+|||+.|++.++..++..
T Consensus 144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 144 KALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998999999998776544433
No 39
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=4.8e-23 Score=208.67 Aligned_cols=401 Identities=13% Similarity=0.081 Sum_probs=253.9
Q ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGI---SSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~---~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
-+-++...++.+.++|-+ +....+++.++.++|.+|.|.+.+++++.+.++..+.|.++||. +.|+.+-+++++.+
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsa 105 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHH
Confidence 355666667777777765 35566688999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
+..++..+++ +...+.+..++.|...|.-.|.+...++.++|++| ||+..
T Consensus 106 i~nil~Gfs~------------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~ 155 (448)
T COG2271 106 IVNILFGFSP------------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWW 155 (448)
T ss_pred HHHHHHhhhh------------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceE
Confidence 9999999885 67788888889999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHhhhhh--hhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCC
Q 007604 192 NWWMFSIFFGTLLGNTVL--VYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNV 269 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~--~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (596)
++++.+-|+|+++.|++. +++..+.+||..|++++++.++..++.+...++.+....-+ +.++.
T Consensus 156 siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP-~ie~~------------- 221 (448)
T COG2271 156 SIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP-PIEEY------------- 221 (448)
T ss_pred EEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC-CHHHh-------------
Confidence 999999999999999999 88888889999999999765444433333333222211000 00000
Q ss_pred CCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhc
Q 007604 270 PLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQ 349 (596)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~ 349 (596)
-+++.+.++ .++..+.+..++.+. +.+-+-|. +..+.+..+..|.+-..
T Consensus 222 --~~d~~e~~~------~~~~~~~ls~~~i~~--------------------~YVL~Nk~---iW~la~a~vfvYivR~g 270 (448)
T COG2271 222 --RGDPLEIYE------EEKENEGLTAWQIFV--------------------KYVLKNKL---IWLLALANVFVYVVRYG 270 (448)
T ss_pred --hcCchhhhh------hhccCCCccHHHHHH--------------------HHHHcChH---HHHHHHHHHHHHHHHHH
Confidence 000111100 000000011010000 00111111 11122222222322221
Q ss_pred ---ccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHH
Q 007604 350 ---INTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIM 426 (596)
Q Consensus 350 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~ 426 (596)
..+.+..+..+.+ ........+..-.+.+.+..+.+++.||+.+.+++ + .-.+.+++..+++
T Consensus 271 i~dW~p~YL~e~k~~s-------~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~------p--~~~i~~~~i~~~~ 335 (448)
T COG2271 271 INDWGPLYLSEVKGFS-------LVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG------P--MALIFMLLITASL 335 (448)
T ss_pred HhhhHHHHHHHhcCCC-------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc------h--HHHHHHHHHHHHH
Confidence 1223333322222 11233344555667778888999999999866321 1 1222233333333
Q ss_pred HHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhh--HHHHHhhccchhHHHHHHHHHHHHhH-
Q 007604 427 VIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAK--IEFFYDQAPESMKSLGTSYSMTTLGV- 503 (596)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~--~~~~~~~~P~~~rg~~~g~~~~~~~i- 503 (596)
+.+-... +.+.+...+.++.+|+ .+..|.. -....|.+|++..|++.|+..++..+
T Consensus 336 ~~~w~~~-------------------~~~~~l~~~~l~~iGf--~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~ 394 (448)
T COG2271 336 VLYWLAP-------------------NGSYLLDAILLFIIGF--LIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLI 394 (448)
T ss_pred HHHHcCC-------------------CccHHHHHHHHHHHHH--HHhhHHHHHHHHHhccccHhhccchhchhhhHHHHh
Confidence 3332221 1233333333344443 3333332 23456889999999999999999998
Q ss_pred HHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccc
Q 007604 504 GNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYV 563 (596)
Q Consensus 504 g~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 563 (596)
|+.++....+.+.+. -+| ...|.++.+.++++.++++...+..+
T Consensus 395 Ga~~a~~~~g~i~d~------~gW----------~g~Fi~~~~~a~l~~lll~~~~~~~~ 438 (448)
T COG2271 395 GAALAGLPLGYIADT------WGW----------DGGFIVLSIAALLAILLLLPVWNAEE 438 (448)
T ss_pred hHHhcCCcceeeEec------CCC----------cchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 888888888887653 244 34577667777777777666665433
No 40
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.92 E-value=2e-22 Score=219.90 Aligned_cols=399 Identities=12% Similarity=0.102 Sum_probs=243.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
+..+++..++..+....+ .....++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIV-NVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 344445555554544434 4444456678999999999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
++++.+. +...++++|+++|++.+...+...+++.|.+|+++ |+++.+++
T Consensus 82 ~~~~~~~------------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~ 131 (485)
T TIGR00711 82 LLCGVAP------------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIW 131 (485)
T ss_pred HHHhCcC------------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHH
Confidence 8887663 67788999999999999999999999999999875 99999999
Q ss_pred HHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHH-H-----HHHHHHHHhcC
Q 007604 195 MFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRM-A-----KVIVAAIRKRN 268 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~ 268 (596)
+....+|..+||.+++++.+..|||+.|++.+...++..+..+...++.++++.++...... . ..+.....+..
T Consensus 132 ~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~ 211 (485)
T TIGR00711 132 GLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGP 211 (485)
T ss_pred HHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999887665554444333333211111111110000 0 00000000000
Q ss_pred CCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHh-HHHHHHHhhhhhhhh
Q 007604 269 VPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLA-MIPILVATFVPSTML 347 (596)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~-~~~~~~~~~~~~~~~ 347 (596)
.....++.+.....-..... .........+ ...+. .+.+..+.|.+.. .+..++....++...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (485)
T TIGR00711 212 ERGWFDSNEILILSITGLVA-----------IIAFVVWELT--DDNPL---VDLRLFKYRNFTIGCVYMSLLGLGLYGSF 275 (485)
T ss_pred CCCCCCchHHHHHHHHHHHH-----------HHHHHHHHHc--CCCCc---cCHHHHcCCChHHHHHHHHHHHHHHHHHH
Confidence 00000000000000000000 0000000000 00000 0000011111111 111111122222211
Q ss_pred hcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHH
Q 007604 348 AQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMV 427 (596)
Q Consensus 348 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~ 427 (596)
...+.++ ....+.+ ....+.......++.+++.++..++.||+++| +.+.++.++.+++..
T Consensus 276 ~~~p~~~-~~~~g~s-------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~g~~~~~~~~~ 336 (485)
T TIGR00711 276 YLLPLYL-QQVLGYT-------ALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-----------KLVTIGLILYAVGFY 336 (485)
T ss_pred HHHHHHH-HHhcCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH-----------HHHHHHHHHHHHHHH
Confidence 1111111 1111111 11223444556677777888888877666655 346667777777666
Q ss_pred HHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHH
Q 007604 428 IASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFL 507 (596)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~l 507 (596)
...+... ...+.+..+...++.|++.+...+.......+..|++.+|+++|+.++.+.+|+.+
T Consensus 337 ~~~~~~~-----------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i 399 (485)
T TIGR00711 337 WRAFTFT-----------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSI 399 (485)
T ss_pred HHhccCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHH
Confidence 5542110 02344555666788999999988888888889999999999999999999999999
Q ss_pred HhHHHhhhhc
Q 007604 508 SSFLLSTVSD 517 (596)
Q Consensus 508 g~~~~~~i~~ 517 (596)
|+.+.+.+.+
T Consensus 400 g~~i~g~~~~ 409 (485)
T TIGR00711 400 GTALITTILT 409 (485)
T ss_pred HHHHHHHHHH
Confidence 9999988864
No 41
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=4.9e-22 Score=213.21 Aligned_cols=166 Identities=13% Similarity=0.094 Sum_probs=142.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
+++.+....+..+...+..+.. .++..++.+++|.++.+.+++.+.+.++..+++++.|+++||+ |||+++.++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~ 93 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 3445555555555555555544 4455567789999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++.++++++. +...++++|++.|++.+...+....++.|.+|+++ |+++
T Consensus 94 ~~~~~~~~~~~------------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~ 143 (426)
T PRK12307 94 SVGTGLSGLAS------------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKA 143 (426)
T ss_pred HHHHHHHHHHh------------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHh
Confidence 99998888774 67889999999999999999999999999999886 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHH
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALG 228 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~ 228 (596)
.++.+.+..+|.++++.+.+++.+..+||+.|++.++.
T Consensus 144 ~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 144 SAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 99999999999999999999888889999999876543
No 42
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.91 E-value=4.2e-22 Score=215.60 Aligned_cols=150 Identities=11% Similarity=0.056 Sum_probs=121.2
Q ss_pred HHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 007604 55 NLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDI 134 (596)
Q Consensus 55 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 134 (596)
....|+.++ |++..+.+++.+.+.++..++++++|+++||+ |||++++++.++..++.++++++...
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~----------- 116 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWA----------- 116 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhcc-----------
Confidence 344567777 99999999999999999999999999999998 99999999999988888877765210
Q ss_pred CCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHH-Hhhhhhhhcc
Q 007604 135 NSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTL-LGNTVLVYIQ 213 (596)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~-l~~~~~~~l~ 213 (596)
..+...+++.|++.|++.+...|.....+.|++|+++ |+++.++++.+.++|+. .+|+++..+.
T Consensus 117 ---------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 181 (452)
T PRK11273 117 ---------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFLLGMA 181 (452)
T ss_pred ---------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 0156677888999999999988888888999999876 99999999999999874 4554433333
Q ss_pred ccccchhhhHHHHHHHHHH
Q 007604 214 DDVGWALGYGLPALGLAIA 232 (596)
Q Consensus 214 ~~~g~~~~f~~~~~~~~~~ 232 (596)
...|||+.|++.++..++.
T Consensus 182 ~~~gw~~~f~i~~~~~~~~ 200 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILV 200 (452)
T ss_pred HhccHHHHHHHHHHHHHHH
Confidence 3458999999877654443
No 43
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.91 E-value=8.2e-22 Score=207.39 Aligned_cols=365 Identities=11% Similarity=0.094 Sum_probs=225.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHH-HHHHHHHHHHHHH
Q 007604 40 VYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVI-AFFFYLMGMIVLA 118 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~-~~~~~~i~~~~~~ 118 (596)
+..++..++.......++.|+++++|.+..+.+++.+.+.+...+..++.|+++||+ ||||.++. +..+..++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 446667777777889999999999999999999999999999999999999999998 99887654 4555556666666
Q ss_pred HHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh--HHHHHH
Q 007604 119 LSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF--FNWWMF 196 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~ 196 (596)
.+. +...+++.|++++.+.+...|...++..|..|++. |+.. .+..+.
T Consensus 83 ~~~------------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~ 132 (375)
T TIGR00899 83 WNR------------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRA 132 (375)
T ss_pred hcc------------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHH
Confidence 553 66677788888888877788888888888877654 4433 577777
Q ss_pred HHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCch
Q 007604 197 SIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQ 276 (596)
Q Consensus 197 ~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (596)
..++|..+||.+++++.+..|||+.|++.++..++..+..+...++.++++++++. ..
T Consensus 133 ~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 190 (375)
T TIGR00899 133 QISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALT----------------------RL 190 (375)
T ss_pred HHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccccC----------------------cc
Confidence 88999999999999998889999999988876555444433322321111100000 00
Q ss_pred hhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeee
Q 007604 277 ELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVK 356 (596)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (596)
+.++ .+ + .++.+.+... .++............+.+...
T Consensus 191 ------------------~~~~----------------~~---~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 228 (375)
T TIGR00899 191 ------------------EVRG----------------LL---A---SRDTRLLFVA--CTLMWGCNILYIINMPLLIIH 228 (375)
T ss_pred ------------------hhhh----------------hh---c---CcchHHHHHH--HHHHHHHHHHHHhhhHHHHHH
Confidence 0000 00 0 0011111111 111111111111111111111
Q ss_pred eeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhh
Q 007604 357 QGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYR 436 (596)
Q Consensus 357 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~ 436 (596)
..+.+ ....+..........+++.++.+++.||+++| +.+.++.++..+.++.....
T Consensus 229 -~~g~~-------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~~~~~~~~~~~~~~~~~~~~---- 285 (375)
T TIGR00899 229 -ELGLP-------DKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----------RLMLLAALAGVAFYTGLAAD---- 285 (375)
T ss_pred -HcCCC-------HHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----------hHHHHHHHHHHHHHHHHHHH----
Confidence 01111 11111222223333444555666766666555 22444444433333332221
Q ss_pred hhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhh
Q 007604 437 LSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVS 516 (596)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~ 516 (596)
.+.+..+...++.+++.+...+....+..|..|++ +++++|+++....+|..+++.+.+.+.
T Consensus 286 -----------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~ 347 (375)
T TIGR00899 286 -----------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILA 347 (375)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 13444455567778888888888888889988865 569999999999999999999999886
Q ss_pred ccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHH
Q 007604 517 DITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFL 556 (596)
Q Consensus 517 ~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~ 556 (596)
+.. ++...|++.++..+++.++..
T Consensus 348 ~~~----------------g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 348 ERW----------------SYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred Hhc----------------cchhHHHHHHHHHHHHHHHHh
Confidence 522 235567776766666655543
No 44
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.91 E-value=3.4e-22 Score=218.89 Aligned_cols=170 Identities=15% Similarity=0.255 Sum_probs=144.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHH
Q 007604 30 GGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF 109 (596)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 109 (596)
.+|+.+..+.+..++..+....+. .+..++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLIT-LVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 445556666666666666555444 444567789999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhh
Q 007604 110 YLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLS 189 (596)
Q Consensus 110 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (596)
.+++.+++.++. +...+++.|++.|++.++..+...+++.|.+|+++ |++
T Consensus 95 ~~~~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 144 (496)
T PRK03893 95 FSVGTLACGFAP------------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNK 144 (496)
T ss_pred HHHHHHHHHHHh------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHH
Confidence 999988888764 67788999999999999999999999999999885 999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHH
Q 007604 190 FFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAI 231 (596)
Q Consensus 190 ~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~ 231 (596)
+.++.+...++|..++|.+.+++.+.++||+.|++.++..++
T Consensus 145 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~ 186 (496)
T PRK03893 145 ASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF 186 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999889999999876544433
No 45
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.91 E-value=8.8e-22 Score=204.11 Aligned_cols=347 Identities=16% Similarity=0.225 Sum_probs=257.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHH
Q 007604 37 FVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIV 116 (596)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~ 116 (596)
.+.+..++..+..+......+.|.+ ++|.+..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 3455566777777777777777765 6799999999999999999999999999999998 9999999999999999988
Q ss_pred HHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHH
Q 007604 117 LALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMF 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (596)
..... +...+++.|++.|++.+...+...++..|.+|+++ |++.+++.+.
T Consensus 81 ~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 130 (352)
T cd06174 81 LAFAS------------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSA 130 (352)
T ss_pred HHHhc------------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHH
Confidence 87763 67788999999999999999999999999999976 9999999999
Q ss_pred HHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCch
Q 007604 197 SIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQ 276 (596)
Q Consensus 197 ~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (596)
..++|..++|.+.+.+.+..+|++.+++.++..++..+.....+ + .
T Consensus 131 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~--------------------- 176 (352)
T cd06174 131 GFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-----------R--L--------------------- 176 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-----------H--H---------------------
Confidence 99999999999999999888899999988876555544433221 0 0
Q ss_pred hhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeee
Q 007604 277 ELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVK 356 (596)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (596)
.....+................+.+...
T Consensus 177 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (352)
T cd06174 177 ----------------------------------------------------LLLLALAFFLLSFGYYGLLTYLPLYLQE 204 (352)
T ss_pred ----------------------------------------------------HHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 0000000011111111111111111111
Q ss_pred eeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhh
Q 007604 357 QGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYR 436 (596)
Q Consensus 357 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~ 436 (596)
. .+.+ ....+.......+..+++.++..++.||.++|+ ..+..+.++..++.+.....
T Consensus 205 ~-~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~~~~~~~~---- 262 (352)
T cd06174 205 V-LGLS-------AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR----------LLLLIGLLLAALGLLLLALA---- 262 (352)
T ss_pred h-cCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------HHHHHHHHHHHHHHHHHHHh----
Confidence 0 0001 122344556667777888888888877777662 04667777777777666543
Q ss_pred hhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhh
Q 007604 437 LSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVS 516 (596)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~ 516 (596)
.+.+...+..++.+++.+...+...++..|..|++.|++.+|+.+....++..+++.+.+.+.
T Consensus 263 -----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~ 325 (352)
T cd06174 263 -----------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLL 325 (352)
T ss_pred -----------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 235566777899999999999999999999999999999999999999999999999999886
Q ss_pred ccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHH
Q 007604 517 DITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFL 556 (596)
Q Consensus 517 ~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~ 556 (596)
+. .++...+++.+++.+++.++.+
T Consensus 326 ~~----------------~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 326 DT----------------GGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred cc----------------cCcchHHHHHHHHHHHHHHHhe
Confidence 41 2335567777777766655443
No 46
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.91 E-value=2.1e-21 Score=204.90 Aligned_cols=352 Identities=10% Similarity=0.097 Sum_probs=224.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|..+.+....+...++.......+| ++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~ 82 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFAL 82 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHH
Confidence 3344444434444444444444444 45678999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.+++..+. +...+++.|++.|++.+...+...+++.|.+|+++ |++.++
T Consensus 83 ~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 132 (385)
T TIGR00710 83 SSLGLALSN------------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYS 132 (385)
T ss_pred HHHHHHHHc------------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHH
Confidence 888887764 67788899999999999999999999999999875 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCC
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLP 272 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (596)
+.+....+|..++|.+++++.+..+|+.+|++.++..++..+..+...++.+.+++++ ...+..+..+
T Consensus 133 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----------- 200 (385)
T TIGR00710 133 ILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI-QISTYFETFL----------- 200 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC-CHHHHHHHHH-----------
Confidence 9999999999999999999988889999998877665555444433333211111000 0000000000
Q ss_pred CCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHH-HHHHHhhhhhhhhhccc
Q 007604 273 IDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMI-PILVATFVPSTMLAQIN 351 (596)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 351 (596)
+..+.+.+.... ...+....++......
T Consensus 201 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (385)
T TIGR00710 201 --------------------------------------------------LLLKSKMFWGYALIYGASFGGFFAFFSGA- 229 (385)
T ss_pred --------------------------------------------------HHHcCchhHHHHHHHHHHHHHHHHHHHcC-
Confidence 000011111111 1111111111111111
Q ss_pred ceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 007604 352 TLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASF 431 (596)
Q Consensus 352 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~ 431 (596)
+.+..+..+.+ ....+.......+..+++.++..++.||+++| +.+..+.++.+++.+....
T Consensus 230 ~~~~~~~~g~~-------~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 230 PFVYIDIMGVS-------PSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----------SLLRMGLILFAVSAVLLEI 291 (385)
T ss_pred hHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----------HHHHHHHHHHHHHHHHHHH
Confidence 11111111111 11123344455666777777888877666655 3355556566655544443
Q ss_pred HhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHH
Q 007604 432 TERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFL 511 (596)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~ 511 (596)
.... ...+...++...++.|++.+...+....+..|..| +.+|+++++.+.....++.+.+.+
T Consensus 292 ~~~~----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~ 354 (385)
T TIGR00710 292 TAIL----------------GLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL 354 (385)
T ss_pred HHHh----------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 2110 01123344455677888889888888888888887 579999999988776655555555
Q ss_pred Hhh
Q 007604 512 LST 514 (596)
Q Consensus 512 ~~~ 514 (596)
.+.
T Consensus 355 ~~~ 357 (385)
T TIGR00710 355 VSL 357 (385)
T ss_pred HHh
Confidence 553
No 47
>TIGR00898 2A0119 cation transport protein.
Probab=99.91 E-value=8.8e-22 Score=216.18 Aligned_cols=385 Identities=14% Similarity=0.100 Sum_probs=233.4
Q ss_pred HHhhhcCCC---hhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCC
Q 007604 59 YLTDKLHHG---TVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDIN 135 (596)
Q Consensus 59 yl~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 135 (596)
.+.++++++ ..+.+++.+++.++..++.++.|+++||+ |||++++++.++..++.++.+++.
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~-------------- 178 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP-------------- 178 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc--------------
Confidence 456789998 89999999999999999999999999998 999999999999999888888764
Q ss_pred CccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccc
Q 007604 136 SQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDD 215 (596)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~ 215 (596)
+...+++.|++.|++.++..+...+++.|.+|+++ |+.+.++...+..+|.++++.++..+.+
T Consensus 179 ----------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 241 (505)
T TIGR00898 179 ----------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD- 241 (505)
T ss_pred ----------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH-
Confidence 78889999999999999999999999999999986 9999999988999999999977766543
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCccccc
Q 007604 216 VGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIG 295 (596)
Q Consensus 216 ~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (596)
||+.|++.++..++..+..+..++..+....++ ..++..+.+....+..+...+ .+.......+ .....
T Consensus 242 --wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~-~~~~a~~~l~~~~~~~~~~~~---~~~~~~~~~~-~~~~~---- 310 (505)
T TIGR00898 242 --WRWLQLAVSLPTFLFFLLSWFVPESPRWLISQG-RIEEALKILQRIAKINGKKLP---AEVLSLSLEK-DLSSS---- 310 (505)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCC-CHHHHHHHHHHHHHHcCCCCC---HHHHhhhhhh-hhhhc----
Confidence 999998887765555544444332211111111 122222332222222221111 1110000000 00000
Q ss_pred CCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHH-HHHHHhhhhhhhhhcccceeeeeeccccccCCCccccccc
Q 007604 296 STQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMI-PILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPA 374 (596)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 374 (596)
.+..... +..+.+.+.... ............+.. ...+.. .++ ....
T Consensus 311 -~~~~~~~-------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~----~~~~ 358 (505)
T TIGR00898 311 -KKQYSFL-------------------DLFRTPNLRKTTLCLMMLWFTTAFSYYG-LVLDLG-------NLG----GNIY 358 (505)
T ss_pred -cCCCcHH-------------------HHhCChHHHHHHHHHHHHHHHHHHHHHH-Hhcccc-------ccC----CChH
Confidence 0000000 000111111111 111111111111100 011111 011 0111
Q ss_pred ccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCccee
Q 007604 375 SLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPL 454 (596)
Q Consensus 375 ~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (596)
....+..+..+++..+..++.||++|| +.+.+++++.+++.+...+.. ..
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr-----------~~~~~~~~~~~~~~l~~~~~~-------------------~~ 408 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRR-----------YTMAASLLLAGVALLLLLFVP-------------------VD 408 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHHHHcC-------------------CC
Confidence 122233445555666667777777766 335666666666665554431 11
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcc
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNV 534 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~ 534 (596)
+.+..+...++.+++.....+..+.+..|.+|++.|++++|+.+....+|+.+++.+.+ +.+
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~----------------- 470 (505)
T TIGR00898 409 LYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE----------------- 470 (505)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-----------------
Confidence 22334444556667777777888899999999999999999999999999999999887 322
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhccccccC
Q 007604 535 CHLDYYYAFFAILNVLNFVFFLVVAKFYVYKAE 567 (596)
Q Consensus 535 ~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~ 567 (596)
.+....++++++..++..++.+ +.+++++++.
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~-~lpet~~~~l 502 (505)
T TIGR00898 471 KWLFLPLVLFGGLALLAGILTL-FLPETKGVPL 502 (505)
T ss_pred HHHhhHHHHHHHHHHHHHHHHH-cCcCCCCCCC
Confidence 1123356666666666555443 3455555443
No 48
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.91 E-value=5e-21 Score=203.98 Aligned_cols=390 Identities=14% Similarity=0.011 Sum_probs=238.9
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHH
Q 007604 28 KRGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAF 107 (596)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~ 107 (596)
|.+.||+.....+..++..++.+....+++.++ +++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++..+.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~ 85 (402)
T TIGR00897 8 KIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGL 85 (402)
T ss_pred HcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHH
Confidence 345667888888888888888777778888888 56899999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhh
Q 007604 108 FFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHK 187 (596)
Q Consensus 108 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 187 (596)
.+..++.+++..... . ..+...+++.|++.|+|.+...+...+.+.+.+|+++ |
T Consensus 86 ~~~~~~~~~~~~~~~-~-------------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~ 139 (402)
T TIGR00897 86 LLWCVGHAAFIVFGL-G-------------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------L 139 (402)
T ss_pred HHHHHHHHHHHHHhc-c-------------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------H
Confidence 998888765532110 0 0156677888999999988887888888899999876 9
Q ss_pred hhhHHHHHHHHHHHH-HHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHh
Q 007604 188 LSFFNWWMFSIFFGT-LLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRK 266 (596)
Q Consensus 188 ~~~~~~~~~~~~ig~-~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (596)
+++.++.+.+.++|. .++|.+++++.+..||+..+|.......+..+..+...++.++ ++++. +
T Consensus 140 g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~------------ 204 (402)
T TIGR00897 140 SSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT--PQHMQ-T------------ 204 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC--ccccc-C------------
Confidence 999999999999996 5889888998888887766665544333333222222222110 10000 0
Q ss_pred cCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHH-hHHHHHHHhhhhhh
Q 007604 267 RNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQML-AMIPILVATFVPST 345 (596)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l-~~~~~~~~~~~~~~ 345 (596)
+++..+.. +..+ .+.+.|.+. .....++....++.
T Consensus 205 -----~~~~~~~~------------------~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~ 240 (402)
T TIGR00897 205 -----REKFSELG------------------KAAT---------------------ILFTNPNVLLGGMVRIINTIGLFG 240 (402)
T ss_pred -----CcchhhHH------------------HHHH---------------------HHHcChhHHHHHHHHHHHHHHHHH
Confidence 00000000 0000 000111111 11111122222222
Q ss_pred hhhcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHH
Q 007604 346 MLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIII 425 (596)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~ 425 (596)
.....+.+ ..+ ...+ ....+.......++.+++.++.+++.||++||+ .. +..+.+..+++
T Consensus 241 ~~~~~p~~-~~~-~g~s-------~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~--------~~--~~~~~l~~~~~ 301 (402)
T TIGR00897 241 FAVFLPMF-VAE-LGFS-------TSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN--------TV--RWFGGVGCGIF 301 (402)
T ss_pred HHHHHHHH-HHH-cCCC-------hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh--------HH--HHHHHHHHHHH
Confidence 22222222 111 1111 111223334456677788888888887777652 11 11222223332
Q ss_pred HHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHH
Q 007604 426 MVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGN 505 (596)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~ 505 (596)
.+........ ...+.+..++..++.|++.....+. .....+.. ++.||+++|+.+....+|+
T Consensus 302 ~~~l~~~~~~----------------~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~ 363 (402)
T TIGR00897 302 TLALYYIPQH----------------FGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSA 363 (402)
T ss_pred HHHHHHHHHc----------------cCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHH
Confidence 2222211100 0113344455667777777665443 44555554 4689999999999999999
Q ss_pred HHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 007604 506 FLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLV 557 (596)
Q Consensus 506 ~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~ 557 (596)
.++|.+.+.+.+.. ++...+++.+++.+++.++..+
T Consensus 364 ~~gp~i~g~l~~~~----------------g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 364 FLAPAIAVLFIGFF----------------GAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHhhc----------------chHHHHHHHHHHHHHHHHHHHH
Confidence 99999999887532 2345677777776666655544
No 49
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.91 E-value=1.9e-21 Score=205.80 Aligned_cols=171 Identities=12% Similarity=0.062 Sum_probs=148.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+.++.+.+..+......+...+.+|. +.+++|.+..+.+++.+.+.++..+++++.|+++||+ |||+++.++..+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 45677777777777777777777765 5668999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.+++++++ +.+.+++.|++.|++.+...+....++.|++|+++ |+++++
T Consensus 81 ~~~l~~~~~------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 130 (382)
T PRK10091 81 GNAMFTLSS------------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVA 130 (382)
T ss_pred HHHHHHHhC------------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHH
Confidence 999888774 78889999999999999988888889999998875 899999
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHH
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (596)
....+..+|..++|.+++++.+..|||++|++.++..++..+.
T Consensus 131 ~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 131 GMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988899999999888765444433
No 50
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.91 E-value=2.4e-21 Score=204.91 Aligned_cols=155 Identities=13% Similarity=0.153 Sum_probs=137.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.++.+++..++..+....+...+|.|++ ++|.+..+.|++.+.+.++..+++++.|+++||+ |||+++.++.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 56888888888888888888888888877 6899999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.+.++.+. +.+.+++.|++.|++.+...|...+.+.+..++++ |+++++
T Consensus 84 ~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 133 (381)
T PRK03633 84 GCAGLGLMV------------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLA 133 (381)
T ss_pred HHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHH
Confidence 888887764 77888999999999999988888888888888765 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccch
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWA 219 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~ 219 (596)
+++...++|..+||.+++.+.+...++
T Consensus 134 ~~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 134 AYMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccch
Confidence 999999999999999999887654333
No 51
>PRK09952 shikimate transporter; Provisional
Probab=99.91 E-value=3.8e-21 Score=207.17 Aligned_cols=175 Identities=10% Similarity=0.039 Sum_probs=130.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCChhhhhhHH-----HHHHHHHHHhhhhhHHHhhhhcchhHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKL--HHGTVKSANNV-----TNWGGTIWVTPIFGAGVAEAYLGRYWTFV 104 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--g~~~~~~~~~~-----~~~~~~~~~~~~~~G~laD~~~Grk~~~~ 104 (596)
+|..+..++..+++.+.+.......+.++.+++ +.++. .+++. ++..++..++.++.|+++||+ |||+++.
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l~ 98 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHHH
Confidence 455666777777777777655555555666555 66666 45443 234456678888899999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhh
Q 007604 105 IAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEK 184 (596)
Q Consensus 105 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 184 (596)
++.+++.++.++++++++.... .......+++.|+++|++.|+..|....++.|++|+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~---- 158 (438)
T PRK09952 99 LTVWMMGIATALIGLLPSFSTI----------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK---- 158 (438)
T ss_pred HHHHHHHHHHHHHhcCCcHHHH----------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC----
Confidence 9999999999999887421100 00012357889999999999999999999999999986
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhhhhhhcc--------ccccchhhhHHHHHHHH
Q 007604 185 AHKLSFFNWWMFSIFFGTLLGNTVLVYIQ--------DDVGWALGYGLPALGLA 230 (596)
Q Consensus 185 ~~r~~~~~~~~~~~~ig~~l~~~~~~~l~--------~~~g~~~~f~~~~~~~~ 230 (596)
|+...+..+.+..+|..++..+...+. ..+|||.+|++.++..+
T Consensus 159 --rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 159 --KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 999999888888888888876655543 35799999998776543
No 52
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.91 E-value=6.3e-22 Score=215.04 Aligned_cols=377 Identities=12% Similarity=0.082 Sum_probs=225.8
Q ss_pred hcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccccc
Q 007604 63 KLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKA 142 (596)
Q Consensus 63 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (596)
+++++..+.|.+.+.+.+++.++++++|+++||+ |||+++.++.++..++.+++..+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6899999999999999999999999999999998 9999999999988888877654421
Q ss_pred ccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccc-cchhh
Q 007604 143 STLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDV-GWALG 221 (596)
Q Consensus 143 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~-g~~~~ 221 (596)
.+...+++.|+++|++.+...|....+++|++|+++ |+++.++.+.+.++|.+++|.+++++.+.. |||++
T Consensus 129 --~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~ 200 (465)
T TIGR00894 129 --GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMI 200 (465)
T ss_pred --cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCee
Confidence 145678889999999999999999999999999886 999999999999999999999999998874 99999
Q ss_pred hHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchh
Q 007604 222 YGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLR 301 (596)
Q Consensus 222 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (596)
|++.++..++..+..+...++.++++++.+..+. +.+ ++. .+.... +.++.
T Consensus 201 f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~i---------------------~~~--~~~~~~--~~~~~-- 251 (465)
T TIGR00894 201 FYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK--KYI---------------------NSS--LQGQKG--STRQS-- 251 (465)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH--HHH---------------------Hhh--cccccC--CCCCC--
Confidence 9988776544444333333222211111111000 000 000 000000 00000
Q ss_pred hhhhhhhhcCCCCCcccccchhhhhhhhHHh-HHHHHHHhhhhhhhhhcccceeeeeeccccccCCCcccccccccccch
Q 007604 302 FFNKAAVKTGATNPWILCSVSQVEETTQMLA-MIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFV 380 (596)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 380 (596)
.+| .++...+.+.. .+..++....++....+.+.++.. ..+.+ ....+......
T Consensus 252 ------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-~~g~s-------~~~~g~~~~~~ 306 (465)
T TIGR00894 252 ------------LPI-----KAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISW-VLRVS-------GKENGLLSSLP 306 (465)
T ss_pred ------------CCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcC-------hHHhHHHHHHH
Confidence 000 01111122221 122222222333333333333322 11111 11234445566
Q ss_pred hHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHH
Q 007604 381 TLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIML 460 (596)
Q Consensus 381 ~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 460 (596)
.+..+++.++.+++.|++.+|..... ...+++..+..+...+...+..... ..+....+
T Consensus 307 ~~~~~i~~~~~g~l~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~ 365 (465)
T TIGR00894 307 YLFAWLCSIFAGYLADFLKSSKTLSL---TAARKIFNGIGGLGPGIFAYALPYL------------------SAAFYLTI 365 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcH---HHHHHHHHHHHHHHHHHHHHHHHHc------------------CCchHHHH
Confidence 77778888889999988876632110 1111122222211111111111100 11223333
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHH
Q 007604 461 PQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYY 540 (596)
Q Consensus 461 ~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~ 540 (596)
..+.+.+.+.+...+..+....+.+|+ .+|.++|+.++.+.++..+++.+.+.+.+.. +| +.+...
T Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~------~~-------~~~~~~ 431 (465)
T TIGR00894 366 IILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQD------SK-------NVWLIV 431 (465)
T ss_pred HHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCC------Cc-------hHHHHH
Confidence 344444444444555555566677765 8999999999999999999999988765311 01 224556
Q ss_pred HHHHHHHHHHHHHHHHH
Q 007604 541 YAFFAILNVLNFVFFLV 557 (596)
Q Consensus 541 f~~~~~~~~v~~~~~~~ 557 (596)
|++.++..+++.+++..
T Consensus 432 f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 432 FLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHeee
Confidence 77767666666555543
No 53
>PRK03699 putative transporter; Provisional
Probab=99.91 E-value=3.5e-21 Score=204.65 Aligned_cols=350 Identities=11% Similarity=0.097 Sum_probs=223.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHH
Q 007604 30 GGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF 109 (596)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 109 (596)
+++|..+...+..++...........++. +.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 44566666666666666655545444554 5678999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhh
Q 007604 110 YLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLS 189 (596)
Q Consensus 110 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (596)
..++.++++++. +...+++.|+++|++.|...+...+++.|.+|+++ |+.
T Consensus 82 ~~i~~~l~~~~~------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~ 131 (394)
T PRK03699 82 MILAVAGLMFSH------------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGS 131 (394)
T ss_pred HHHHHHHHHHcc------------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHH
Confidence 999888887753 67788899999999999999999999999998875 999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhcc-ccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcC
Q 007604 190 FFNWWMFSIFFGTLLGNTVLVYIQ-DDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRN 268 (596)
Q Consensus 190 ~~~~~~~~~~ig~~l~~~~~~~l~-~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (596)
..+..+....+|+.++|.+.+++. +..|||++|.+.++..++..+..+..+ .++.++ +++ +
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~--~p~~~~-~~~--------------~- 193 (394)
T PRK03699 132 RLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSE--FPALGK-HAP--------------K- 193 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcC--Cccccc-cCc--------------c-
Confidence 998888888899999998888765 457999999887765444433332211 111000 000 0
Q ss_pred CCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhh
Q 007604 269 VPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLA 348 (596)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~ 348 (596)
+. +.. .+ ..| +.+.....+..++.....+....
T Consensus 194 ---~~---------------~~~----~~----------------~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 226 (394)
T PRK03699 194 ---AD---------------KPV----AK----------------EKW---------GIGVLFLAIAALLYILAQLTFIS 226 (394)
T ss_pred ---cc---------------Ccc----cc----------------ccC---------ChHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 00 000 01111111111111122222222
Q ss_pred cccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 007604 349 QINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVI 428 (596)
Q Consensus 349 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~ 428 (596)
+.+.+...+ .+.+ ....+.......+...++.++.+++.||+.+| +.+..+..+.++.+..
T Consensus 227 ~~p~~l~~~-~g~s-------~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----------~~l~~~~~~~~~~~~~ 287 (394)
T PRK03699 227 WVPEYAQKK-FGMS-------LEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ-----------RILTVLAGLALVLMYL 287 (394)
T ss_pred HHHHHHHHH-cCCC-------hHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh-----------hHHHHHHHHHHHHHHH
Confidence 223222111 1111 11123333444556677777777777766655 2233333333333333
Q ss_pred HHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHH
Q 007604 429 ASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLS 508 (596)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg 508 (596)
.... .+.+++.+..++.|++.+...+...++..+..|++ ++...|.......+|..++
T Consensus 288 ~~~~---------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~ 345 (394)
T PRK03699 288 FVNT---------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLT 345 (394)
T ss_pred HHHc---------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHH
Confidence 3221 13334444556777777777777777877777744 5777888888889999999
Q ss_pred hHHHhhhhc
Q 007604 509 SFLLSTVSD 517 (596)
Q Consensus 509 ~~~~~~i~~ 517 (596)
+.+.+.+.+
T Consensus 346 p~~~G~l~~ 354 (394)
T PRK03699 346 FVVTSPIVA 354 (394)
T ss_pred HHHHHHHHH
Confidence 999998875
No 54
>TIGR00895 2A0115 benzoate transport.
Probab=99.91 E-value=9.2e-22 Score=208.07 Aligned_cols=382 Identities=9% Similarity=0.098 Sum_probs=228.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
++.+...++..+...+.... ......++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAA-MGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHH
Confidence 34444444444444444443 34444566678999999999999999999999999999999998 99999999998888
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++.++...+. +...+++.+++.|++.+...+...+++.|.+|+++ |+++.
T Consensus 94 ~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~ 143 (398)
T TIGR00895 94 VFTLLCALAT------------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAV 143 (398)
T ss_pred HHHHHHHHcc------------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhH
Confidence 8887777653 67778889999999999999999999999999876 99999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCC
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPL 271 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (596)
++.+....+|..+++.+++++.+..||+..|++.++..++..+..+...++.++...++++ ++..+..... ......
T Consensus 144 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~- 220 (398)
T TIGR00895 144 GLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRP-ETVRRIVNAI-APQMQA- 220 (398)
T ss_pred hhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCH-HHHHHHHHHH-HHhccc-
Confidence 9999999999999999999999889999999888644433333333322221111000011 0000000000 000000
Q ss_pred CCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhccc
Q 007604 272 PIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQIN 351 (596)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~ 351 (596)
+. .. +....+...++.. + .++.... ....++.....+...+....++......+
T Consensus 221 ~~-~~-----------~~~~~~~~~~~~~---~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (398)
T TIGR00895 221 EA-QS-----------ALPEQKATQGTKR---S----------VFKALFQ-GKTARITVLLWLLYFMLLVGVYFLTNWLP 274 (398)
T ss_pred cc-cc-----------cccccccccchhh---H----------HHHHHhc-chhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 0000000000000 0 0000000 00001111111111111122211111111
Q ss_pred ceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 007604 352 TLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASF 431 (596)
Q Consensus 352 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~ 431 (596)
++... ...+ ....+.......++.+++.++..++.||+++| .+..+..+.++.......
T Consensus 275 -~~~~~-~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~~~~~~~~~~~ 333 (398)
T TIGR00895 275 -KLMVE-LGFS-------LSLAATGGALFNFGGVIGSIIFGWLADRLGPR------------VTALLLLLGAVFAVLVGS 333 (398)
T ss_pred -HHHHH-cCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH------------HHHHHHHHHHHHHHHHHH
Confidence 11110 0111 11123344455666677777777766666544 133333333333222222
Q ss_pred HhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHH
Q 007604 432 TERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFL 511 (596)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~ 511 (596)
.. .+.+......++.+++.+...+...+++.+.+|++.||+++|+.+....+|..+|+.+
T Consensus 334 ~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 393 (398)
T TIGR00895 334 TL--------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPIL 393 (398)
T ss_pred Hh--------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 1334455666888999999999999999999999999999999999999999999998
Q ss_pred Hhhh
Q 007604 512 LSTV 515 (596)
Q Consensus 512 ~~~i 515 (596)
.+.+
T Consensus 394 ~G~l 397 (398)
T TIGR00895 394 AGYL 397 (398)
T ss_pred HHhc
Confidence 8764
No 55
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=2.8e-21 Score=205.26 Aligned_cols=166 Identities=14% Similarity=0.124 Sum_probs=136.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.++.+++..++..++...+...++.. .+++|.++.+.+++.+.+.+...++.+++|+++||+ |||++++++.+++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 345666777777777655444444444 568899999999999999999999999999999998 999999999999988
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.+++.++. +. ++.|+++|++.+...|+..+++.|.+|+++ |+++.+
T Consensus 81 ~~~~~~~~~------------------------~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~ 127 (393)
T PRK11195 81 GCLLMLFGI------------------------HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANG 127 (393)
T ss_pred HHHHHHHHH------------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHH
Confidence 887776543 32 678999999999999999999999999886 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHH
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIA 234 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 234 (596)
+.+...++|.++||.++|++.+. .|+..+.+.+...+++.+
T Consensus 128 ~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~ 168 (393)
T PRK11195 128 WMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAAL 168 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998874 477777666554444433
No 56
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.90 E-value=9e-21 Score=201.37 Aligned_cols=170 Identities=15% Similarity=0.138 Sum_probs=141.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
.+|.++...+...+..+........+|. +.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++..+.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIAD-MARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 3455666666666666665545555554 4578999999999999999999999999999999998 9999999999998
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++.+++..+. +...+++.|++.|++.+...+....+..|.+++++ |+.+
T Consensus 84 ~~~~~~~~~~~------------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 133 (394)
T PRK11652 84 ILGTLVALFAH------------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHA 133 (394)
T ss_pred HHHHHHHHHHc------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHH
Confidence 88888877653 67788899999999998888888888899888765 8889
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHH
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIA 232 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 232 (596)
.++.+.+..+|..++|.+++++.+..|||++|++.++..++.
T Consensus 134 ~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~ 175 (394)
T PRK11652 134 NSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGV 175 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 999999999999999999999988889999999876654433
No 57
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.89 E-value=1.4e-20 Score=199.85 Aligned_cols=176 Identities=11% Similarity=0.146 Sum_probs=125.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHH-HHHHhhhhhHHHhhhhcchhHHHH-HHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGG-TIWVTPIFGAGVAEAYLGRYWTFV-IAFFFY 110 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Grk~~~~-~~~~~~ 110 (596)
...+..++..++..++.....+.++.|+.+++|.+.++.|++.+...+ +..++++.+|+ +||+ ||||.++ .+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~ 92 (393)
T PRK15011 15 LTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLG 92 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHH
Confidence 345566666778888888888999999999999999999999876544 66666666666 9998 9988754 445555
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++..+.+++. +...+++.+.+.+...+...|....+..|..++++ +..+..
T Consensus 93 ~~~~~~~~~~~------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 144 (393)
T PRK15011 93 VLACTLFAWNR------------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG----REAVMF 144 (393)
T ss_pred HHHHHHHHHhh------------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc----chHHHH
Confidence 56666555553 45555444444333334567778888888776553 012344
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHh
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
.++.+...++|.++||.+++++.+.+|||..|++.++..++..+..+.
T Consensus 145 ~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 145 SSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 578888999999999999999998899999998887655544444333
No 58
>PRK15075 citrate-proton symporter; Provisional
Probab=99.89 E-value=1.1e-20 Score=203.52 Aligned_cols=171 Identities=11% Similarity=0.062 Sum_probs=125.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHH-HHHH-----HHHHHhhhhhHHHhhhhcchhHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNV-TNWG-----GTIWVTPIFGAGVAEAYLGRYWTFVIA 106 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~-~~~~-----~~~~~~~~~~G~laD~~~Grk~~~~~~ 106 (596)
+....+++..++..+....+ ......+.++++.++.+.+... +... ++..+++++.|+++||+ |||++++.+
T Consensus 15 ~~~~~~~~~~~~~~~d~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~ 92 (434)
T PRK15075 15 RAILRVTSGNFLEMFDFFLF-GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIVT 92 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHHH
Confidence 45555666666666665544 4555577888998887765433 2222 22246789999999998 999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhh
Q 007604 107 FFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAH 186 (596)
Q Consensus 107 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 186 (596)
..+..++.++++++.+...+ .......++++|+++|++.+...+....+++|++|+++
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~----------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------ 150 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATI----------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------ 150 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHH----------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------
Confidence 99999999998876421100 00001246889999999999999999999999999986
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhc--------cccccchhhhHHHHH
Q 007604 187 KLSFFNWWMFSIFFGTLLGNTVLVYI--------QDDVGWALGYGLPAL 227 (596)
Q Consensus 187 r~~~~~~~~~~~~ig~~l~~~~~~~l--------~~~~g~~~~f~~~~~ 227 (596)
|+++.++.....++|..+++.+++.+ .+.+|||++|++.++
T Consensus 151 rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 151 KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 99999998888888887777666654 246899999987654
No 59
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=2.1e-20 Score=199.78 Aligned_cols=147 Identities=9% Similarity=0.108 Sum_probs=130.3
Q ss_pred HhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccc
Q 007604 60 LTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDC 139 (596)
Q Consensus 60 l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (596)
+.+++|.+..+.++.++++.++..++++++|+++||+ |||++++++.++..++.+++..+.
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 5678999999999999999999999999999999998 999999999999999998888764
Q ss_pred cccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccccch
Q 007604 140 RKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWA 219 (596)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~ 219 (596)
+...++++|+++|++.+...+....++.|.+|+++ |++..++.....++|..+||.+++++.+..|||
T Consensus 103 ------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~ 170 (413)
T PRK15403 103 ------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWK 170 (413)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 77889999999999998767777888999999875 899999999999999999999999998888999
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 007604 220 LGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 220 ~~f~~~~~~~~~~~~~~~ 237 (596)
+.|++.++..+++.+..+
T Consensus 171 ~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999988776555554433
No 60
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=5.2e-21 Score=205.06 Aligned_cols=391 Identities=8% Similarity=-0.040 Sum_probs=227.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+..+.+.+..++..+++..+.++++.|+++++|+++.+.|.+.+.+.++..+++++.|+++||+ |||++++++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4566666677777777777899999999999999999999999999999999999999999998 999999887666554
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+..........+. -......+.++.++..+...+...+...++.++.. ++++..++
T Consensus 89 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~g 144 (420)
T PRK09528 89 LFGPFFIYVFAPL--------------------LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRSGFEYG 144 (420)
T ss_pred HHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhccccch
Confidence 4332211100000 00001112222233333222222222333322111 13677778
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCC
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLP 272 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (596)
..+...++|..++|.+++++.+ .+|+.+|++.++..++.++..+..+++.++++..++. +
T Consensus 145 ~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~ 204 (420)
T PRK09528 145 RARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA-------------------L 204 (420)
T ss_pred hhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccc-------------------h
Confidence 8888889999999999998876 5899999887766555554444433221111000000 0
Q ss_pred CCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHH-HHhhhhhhhhhccc
Q 007604 273 IDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPIL-VATFVPSTMLAQIN 351 (596)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~-~~~~~~~~~~~~~~ 351 (596)
+ ... + +. ..-+.. ...+.+.+....... .....+.....+.+
T Consensus 205 ~---------------~~~---~-~~--~~~~~~----------------~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~ 247 (420)
T PRK09528 205 G---------------ANA---S-AV--SLKDAL----------------ALLKLPKFWFLVLYVIGVACFYDVFDQQFP 247 (420)
T ss_pred h---------------ccc---c-cc--cHHHHH----------------HHccCCCeEeehHHHHHHHHHHHHHHHHHH
Confidence 0 000 0 00 000000 000011111111111 11122222222223
Q ss_pred ceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 007604 352 TLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASF 431 (596)
Q Consensus 352 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~ 431 (596)
.+...... +...+ ....+....+..+...++.++.+++.||+++| +.+..+.++.+++.+..++
T Consensus 248 ~~~~~~~~--~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~l~~~~~~l~~~ 311 (420)
T PRK09528 248 NFFASFFA--TPEQG---TRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----------NALLLAGTIMAVRIIGSGF 311 (420)
T ss_pred HHHHHHHh--ccCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----------hhhHHHHHHHHHHHHHHHh
Confidence 32221100 11110 01112334445556667777888877777766 3356666666666666554
Q ss_pred HhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHH-HHHHHhHHHHHHhH
Q 007604 432 TERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSY-SMTTLGVGNFLSSF 510 (596)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~ig~~lg~~ 510 (596)
. .++++++...++.+++.....+....++.+..|++.+++..+. +++...+|..+++.
T Consensus 312 ~---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~ 370 (420)
T PRK09528 312 A---------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLST 370 (420)
T ss_pred c---------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHH
Confidence 3 2445566667788888888778888999999999999988766 67788899999999
Q ss_pred HHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 007604 511 LLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVV 558 (596)
Q Consensus 511 ~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 558 (596)
+.+.+.+.. ++...|+..+++.++..++.+..
T Consensus 371 ~~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 371 LAGNLYDSI----------------GFQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred HHHHHHHhh----------------CchHHHHHHHHHHHHHHHHHHHH
Confidence 999887522 24567777777766666555544
No 61
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=3.3e-20 Score=196.30 Aligned_cols=395 Identities=11% Similarity=0.084 Sum_probs=234.8
Q ss_pred hhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHH
Q 007604 72 ANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFF 151 (596)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (596)
+.+++++.+|.++|+.++|+++||+ |||..++++.++..++.++..++...+ ...++.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~---------------------~~e~li 120 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAP---------------------SFEMLI 120 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhh---------------------hHHHHH
Confidence 4667889999999999999999999 999999999999888888887775322 788899
Q ss_pred HHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhh--hccccccchhhhHHHHHHH
Q 007604 152 AALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLV--YIQDDVGWALGYGLPALGL 229 (596)
Q Consensus 152 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~--~l~~~~g~~~~f~~~~~~~ 229 (596)
++|++.|+..|......+.++.|..|++. ||........+..+|..++..++. .+.....|.+.+.+.++..
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~ 194 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPA 194 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999997 999999999999999999965542 3445566999888888776
Q ss_pred HHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhh
Q 007604 230 AIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVK 309 (596)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (596)
++.++...++++.-+.--.+++..+++.+.+ +..+ ..++.....+....+..+....+ .+.....|
T Consensus 195 ~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl----~~y~--G~~~~~~~~e~~~~e~~~~~~~~---~~~~sl~~----- 260 (485)
T KOG0569|consen 195 LLQLALLPFLPESPKYLLIKKGDEEEARKAL----KFYR--GKEDVEAEIEEMLREIEEEELEK---KKQISLRQ----- 260 (485)
T ss_pred HHHHHHHhcCCCCcchHHHHcCCHHHHHHHH----HHHh--CCCcchhHHHHHHHHHHHhcccc---ccCCcHHH-----
Confidence 6666655544322111100011111221111 1111 01111111111110000000000 00000000
Q ss_pred cCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCCCccccc-ccccccchhHHHHHHH
Q 007604 310 TGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIP-PASLTGFVTLSMLVCV 388 (596)
Q Consensus 310 ~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~i~~ 388 (596)
. .+++ ..++.+...+.+.+.+..-.......++.... .+.| +... ....+....+..++..
T Consensus 261 --------~-~~~~-~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~------~~aG--~~~~~a~~an~~~g~v~~~~t 322 (485)
T KOG0569|consen 261 --------L-LKNP-TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIF------KTAG--FTPEEAQYANLGIGIVNLLST 322 (485)
T ss_pred --------H-hcCc-chhHHHHHHHHHHHHHHhcCcceeHHHHHHHH------HHcC--CCHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 11222222222212111111111111111111 1111 1111 1222233344445555
Q ss_pred HHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCccee-hhHH-H-HHHHHH
Q 007604 389 VLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPL-TIFI-M-LPQFVL 465 (596)
Q Consensus 389 ~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-l-i~~~~l 465 (596)
.+...++||++|| ..+.+++.++.+..+++.....-.. .. ++.+ . +...++
T Consensus 323 ~~~~~lid~~gRR-----------pLll~~~~~~~~~~~~~~~~~~l~~---------------~~~~~~~y~~i~~~~~ 376 (485)
T KOG0569|consen 323 LVSPFLIDRLGRR-----------PLLLISLSLMAVALLLMSIALFLSN---------------SFGSWLSYLCIAAIFL 376 (485)
T ss_pred HHHHHHHHhcCCc-----------HHHHHHHHHHHHHHHHHHHHHHHHH---------------HhhhHHHHHHHHHHHH
Confidence 5666677778877 3355566666655544443321000 01 2222 1 233333
Q ss_pred H-HHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHH
Q 007604 466 M-GTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFF 544 (596)
Q Consensus 466 ~-g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~ 544 (596)
+ .....+..|..+-+.+|.+|++.|..++++..+.+++.+++-....+.+....+ +++|..+
T Consensus 377 ~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-----------------~~~filF 439 (485)
T KOG0569|consen 377 FIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-----------------PYVFILF 439 (485)
T ss_pred HHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------chhhHHH
Confidence 3 334555589999999999999999999999999999999999999988875431 2568888
Q ss_pred HHHHHHHHHHHHHHhhccccccCCC
Q 007604 545 AILNVLNFVFFLVVAKFYVYKAEVS 569 (596)
Q Consensus 545 ~~~~~v~~~~~~~~~~~~~~~~~~~ 569 (596)
.+..++..+..+...+++|+|+..+
T Consensus 440 ~i~~~~~~i~~~~~lPETkgr~~~e 464 (485)
T KOG0569|consen 440 VIPLAIFLIYLYRYLPETKGRTPYE 464 (485)
T ss_pred HHHHHHHHHHHHHhCcccCCCCHHH
Confidence 8888888888888889988887643
No 62
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.89 E-value=8.2e-23 Score=215.31 Aligned_cols=367 Identities=34% Similarity=0.578 Sum_probs=237.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCC
Q 007604 100 YWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEF 179 (596)
Q Consensus 100 k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 179 (596)
.|+++++.+++++|.+++.++...+.. +++.+...+++++.++++|.|+..|+..++.+||++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~---------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~ 65 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL---------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDED 65 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC---------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh---------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhccc
Confidence 478999999999999998887632211 22335678999999999999999999999999999987
Q ss_pred ChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceecc-CCCCChhHH-HH
Q 007604 180 EPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHK-KPAGSPFTR-MA 257 (596)
Q Consensus 180 ~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 257 (596)
++ .+|.++|+++|+++|+|+.+++.+.+++.+..||.+.|.++++..+++++.++..+++++++ ++.+++..+ ..
T Consensus 66 ~~---~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~ 142 (372)
T PF00854_consen 66 DD---SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIK 142 (372)
T ss_dssp TT---THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SH
T ss_pred ch---hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHH
Confidence 32 36999999999999999999999999999999999999999999999999999998888776 666676666 34
Q ss_pred HHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCccc-ccchhhhhhhhHHhHHHH
Q 007604 258 KVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWIL-CSVSQVEETTQMLAMIPI 336 (596)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~l~~~~~ 336 (596)
.+.....+++....+....+......... +.. . ...................|.. +..++++..+.+.+.++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 216 (372)
T PF00854_consen 143 LVLVAAFKKRKLAVPKGSSWLDWALFQYS-ERS---I--FGIIVFIRAAVIFFPEIFFWALFCQVQRVEELKALIRFLPI 216 (372)
T ss_dssp HHHHHHHHHHCCCH-HHHHHHHHHHHHHC-CCC---C--CCCCCHHHHHHHHCCCHHHHTTTSSTTTHHHCCHHHCHHHC
T ss_pred HHHHHHHHHhhcccccchHHHHHhhhhhh-hhh---h--hhhhhhccchhhhhhhhhhcccCCccceeeeeeeeeecccc
Confidence 44445555554433321222222111100 000 0 0000001100000000001110 123445556666677776
Q ss_pred HHHhhhhhhhhhcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHH
Q 007604 337 LVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMG 416 (596)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~ 416 (596)
+.+...+.....+.......+...++..+++.+.++++.+.+++++.+++..|+.+++++++.|+. +. +++..++.
T Consensus 217 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~-~~---~~~~~k~~ 292 (372)
T PF00854_consen 217 FLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRG-IQ---PSPPQKFG 292 (372)
T ss_dssp CCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------HHHHH
T ss_pred CeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhc-cc---chhhhhhh
Confidence 666666667767766666777767766666337899999999999999999999999999999842 22 68889999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHH
Q 007604 417 IGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSY 496 (596)
Q Consensus 417 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~ 496 (596)
+|+++..++++..+..+.+|....+..+ ..+.+|.++.+++..++|.+..+.+.+...|.+|++..+.++|+
T Consensus 293 ~G~~~~~~~~~~~~~v~~~r~~~~~~~~--------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~ 364 (372)
T PF00854_consen 293 IGMVFAILAMFVAAIVEIRRLCYAQPCG--------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGI 364 (372)
T ss_dssp HH-HHHHHHHHTTTHHHH---HH----T--------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccC--------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHH
Confidence 9999999999888877765543333333 23447777999999999999999999988888888888888888
Q ss_pred HHHHHh
Q 007604 497 SMTTLG 502 (596)
Q Consensus 497 ~~~~~~ 502 (596)
++....
T Consensus 365 ~~~~~~ 370 (372)
T PF00854_consen 365 WFALSA 370 (372)
T ss_dssp HHHHH-
T ss_pred HHHHhc
Confidence 876553
No 63
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.89 E-value=2.8e-20 Score=202.13 Aligned_cols=359 Identities=14% Similarity=0.164 Sum_probs=241.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.+..+++.+++.+++......-++-++. ++.-|+...+.+..+..+-..+..+++|.++||+ .|||+++.+-++.++
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHH
Confidence 45556667777777776655555555544 5677899999999999999999999999999999 999999999888776
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
..+++++..... ..+.+.+++..++.|++.+...|+..+++.|.+|+++ ...+.+
T Consensus 88 ~~~~L~~l~~~~-------------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~a 142 (524)
T PF05977_consen 88 VALLLAVLAFFG-------------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANA 142 (524)
T ss_pred HHHHHHHHHHhC-------------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHH
Confidence 655554432111 1267788888899999999999999999999999986 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCC
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLP 272 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (596)
+.+...|+...+||.++|.+....|-.++|.+.++..++.+..+...++..+.+ +.+.+...+.++..++.
T Consensus 143 l~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~---~~~~e~~~~~l~~G~ry------ 213 (524)
T PF05977_consen 143 LNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPS---SLPRERFFSALREGLRY------ 213 (524)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc---ccchhhhhhhHHHHHHH------
Confidence 999999999999999999998888988999999887776665555444332111 11111111111000000
Q ss_pred CCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHH-HHHhhhhhhhhhccc
Q 007604 273 IDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPI-LVATFVPSTMLAQIN 351 (596)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 351 (596)
+.+.+.+...+.. .++.+....... ..
T Consensus 214 ---------------------------------------------------v~~~~~l~~~l~~~~~~~l~~~a~~a-Ll 241 (524)
T PF05977_consen 214 ---------------------------------------------------VRSSPPLRSVLLRSFLFNLFASAVWA-LL 241 (524)
T ss_pred ---------------------------------------------------HhcchHHHHHHHHHHHHHHhhhHHHH-hh
Confidence 0011111111111 111111111111 11
Q ss_pred ceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 007604 352 TLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASF 431 (596)
Q Consensus 352 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~ 431 (596)
+.+..+ .++. -...-+.+.+..+++.++++.+..+ +.+| .+..+.+..+.++.+++++.+++
T Consensus 242 Pl~a~~------~l~~-~a~~yGll~a~~gvGai~Gal~~~~----l~~~-------~~~~~lv~~~~~~~a~~~~~lal 303 (524)
T PF05977_consen 242 PLFARD------VLGG-GASGYGLLLAAFGVGAILGALLLPR----LRRR-------LSSRRLVLLASLLFALALLLLAL 303 (524)
T ss_pred hHHHHH------HhCC-cHHHHHHHHHHHHHHHHHHHHHHHH----hhcc-------cCcchhhHHHHHHHHHHHHHHhc
Confidence 222111 1110 0111233444455555665555444 4444 23345567777777777777666
Q ss_pred HhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHH
Q 007604 432 TERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFL 511 (596)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~ 511 (596)
. .+.+..++.+++.|++....++...+.+.+.+|+++||+.++++.+....+..+|..+
T Consensus 304 ~---------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll 362 (524)
T PF05977_consen 304 S---------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLL 362 (524)
T ss_pred c---------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 3 3556667778899999999999999999999999999999999999999999999999
Q ss_pred Hhhhhcc
Q 007604 512 LSTVSDI 518 (596)
Q Consensus 512 ~~~i~~~ 518 (596)
.|.+.+.
T Consensus 363 ~G~la~~ 369 (524)
T PF05977_consen 363 WGFLADH 369 (524)
T ss_pred HHHHHHH
Confidence 9998753
No 64
>PRK11043 putative transporter; Provisional
Probab=99.89 E-value=2.3e-20 Score=198.70 Aligned_cols=160 Identities=11% Similarity=0.164 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHH--HhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 007604 48 AYHGISSNLVMY--LTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSG 125 (596)
Q Consensus 48 ~~~~~~~~l~~y--l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~ 125 (596)
++++...+.|.+ +.+++|.++.+.+++.+++.++..++.+++|+++||+ |||+++.++..+..++.+++..+.
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~---- 92 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE---- 92 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc----
Confidence 333444444443 6779999999999999999999999999999999998 999999999988888888877653
Q ss_pred CCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHh
Q 007604 126 LKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLG 205 (596)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~ 205 (596)
+...+++.|++.|++.+...+...+++.|.+|+++ +++.++......++|..++
T Consensus 93 --------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g 146 (401)
T PRK11043 93 --------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALA 146 (401)
T ss_pred --------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHH
Confidence 67788899999999988888888899999999875 7888888888889999999
Q ss_pred hhhhhhccccccchhhhHHHHHHHHHHHHHHHh
Q 007604 206 NTVLVYIQDDVGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 206 ~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
|.+++++.+..|||+.|++.++..++..+..+.
T Consensus 147 ~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 147 PLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999998899999998877665555444333
No 65
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=2.8e-20 Score=204.42 Aligned_cols=400 Identities=14% Similarity=0.143 Sum_probs=238.4
Q ss_pred hhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhH
Q 007604 69 VKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLG 148 (596)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (596)
.+.+++.+...++..++.+++|+++|++ |||++++++.+++.+|.++++++. +..
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~------------------------~~~ 143 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP------------------------SWY 143 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh------------------------hHH
Confidence 3458999999999999999999999998 999999999999999999999985 889
Q ss_pred HHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccc--ccchhhhHHHH
Q 007604 149 TFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDD--VGWALGYGLPA 226 (596)
Q Consensus 149 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~--~g~~~~f~~~~ 226 (596)
+++++|++.|+|.|+....++.+++|..|++. |+...+..+...++|..++..+ ++..++ ++||..+++..
T Consensus 144 ~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~~-~~~~~~~~~~Wr~~~~~~~ 216 (513)
T KOG0254|consen 144 QLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYCI-NYGTSKVYAGWRIPLGLAL 216 (513)
T ss_pred HHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHHH-hhhhccCCccHHHHHHHHH
Confidence 99999999999999999999999999999987 9999999999999999999644 444433 48998888877
Q ss_pred HHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhh
Q 007604 227 LGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKA 306 (596)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (596)
+..++..+.+++.. +.++.-.+.....+..+.+......+ ......+..+.......+...
T Consensus 217 i~~~~~~~~~~~~p-esp~~L~~~g~~~~a~~~l~~l~g~~---~~~~~~~~~~~~~~~~~~~~~--------------- 277 (513)
T KOG0254|consen 217 IPAVILALGMLFLP-ESPRWLIEKGRLEEAKRSLKRLRGLS---PEDVEVELELLKIKLLVEAEV--------------- 277 (513)
T ss_pred HHHHHHHHHHHhCC-CChHHHHHcCChHHHHHHHHHHhCCC---CcchHHHHHHHHHHHHHhhhc---------------
Confidence 76555555433322 11111001111122222221111101 000000000000000000000
Q ss_pred hhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccc--eeeeeeccccccCCCcccccccccccchhHHH
Q 007604 307 AVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINT--LFVKQGTTLDRAIGSSFKIPPASLTGFVTLSM 384 (596)
Q Consensus 307 ~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 384 (596)
......|..... ...+|.....+.+.. ++|... ....+...+-...| +..+......+..+..
T Consensus 278 ---~~~~~~~~~l~~--~~~~~~~~i~~~l~~--------fqq~tG~~~~~~Y~~~if~~~g--~~~~~~~~~~~~~~v~ 342 (513)
T KOG0254|consen 278 ---AEGKASWGELFS--PKVRKRLIIGLLLQL--------FQQLTGINYVFYYSTTIFKSAG--LKSDTFLASIILGVVN 342 (513)
T ss_pred ---ccccccHHHhcC--cchHHHHHHHHHHHH--------HHHHhCCceEEeehHHHHHhcC--CCCchHHHHHHHHHHH
Confidence 000000000000 011122221121111 222211 11111111112221 1211122233334444
Q ss_pred HHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHH
Q 007604 385 LVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFV 464 (596)
Q Consensus 385 ~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~ 464 (596)
+++..+...++||++|| ..+..|...+.+++++.+........... ......++.++..++
T Consensus 343 ~~~t~~~~~lvd~~gRr-----------~lll~s~~~m~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 403 (513)
T KOG0254|consen 343 FLGTLVATYLVDRFGRR-----------KLLLFGAAGMSICLVILAVVGVFALYYPN--------SSKGAGWLAIVFLCL 403 (513)
T ss_pred HHHHHHHHHHHHHhccH-----------HHHHHhHHHHHHHHHHHHHHHHHhccCCC--------cccchhHHHHHHHHH
Confidence 45555556778888777 44777888888887776654321100000 001234444455556
Q ss_pred HHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHH
Q 007604 465 LMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFF 544 (596)
Q Consensus 465 l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~ 544 (596)
+.........|..+.+..|.+|.+.|+.+.++....+++.+++-....+...... +....|..+
T Consensus 404 ~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~----------------~~~~~f~~f 467 (513)
T KOG0254|consen 404 FIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL----------------GIGGTFGYF 467 (513)
T ss_pred HHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc----------------cccchHHHH
Confidence 6666777778888899999999999999999999999999988877666554211 012456666
Q ss_pred HHHHHHHHH-HHHHHhhccccccCCC
Q 007604 545 AILNVLNFV-FFLVVAKFYVYKAEVS 569 (596)
Q Consensus 545 ~~~~~v~~~-~~~~~~~~~~~~~~~~ 569 (596)
++...+... +.+++.+++++++.++
T Consensus 468 ~~~~~~~~~~fv~~~~pETkg~slee 493 (513)
T KOG0254|consen 468 GGICLLSLIIFVFFFVPETKGLTLEE 493 (513)
T ss_pred HHHHHHHHHHHheEEcccCCCCcHHH
Confidence 666666666 6777778888777643
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.89 E-value=3.9e-20 Score=195.79 Aligned_cols=363 Identities=10% Similarity=-0.015 Sum_probs=225.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHH-HHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF-YLMGM 114 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~-~~i~~ 114 (596)
+.+.+..++...++-...+++|.|++ ++|.+..+.|++.+.+.+...+++++.|.++||+ ||++.....+.+ ..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 33445555555555556788888886 6899999999999999999999999999999998 985433222111 11111
Q ss_pred H-HHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 115 I-VLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 115 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
+ .+..++ +.+.+++.|++++.+.+...|...++..+. ++ +|++.++.
T Consensus 85 ~~~~~~~~------------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~------~~~~~~g~ 132 (382)
T TIGR00902 85 AAFSAGAH------------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW--QK------QFGLDYGK 132 (382)
T ss_pred HHHHHhhh------------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HH------HcCCCccH
Confidence 1 222222 677888899999999888888888876553 23 38899999
Q ss_pred HHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCC
Q 007604 194 WMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPI 273 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (596)
.....++|.+++|.+++++.+.+|||..|++.++..++.++ .+..+++.++++++++. +
T Consensus 133 ~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------------------~ 191 (382)
T TIGR00902 133 VRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTIPPKDAIPED--------------------E 191 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCCCCCcccccc--------------------c
Confidence 99999999999999999999999999998876554333222 22222211110000000 0
Q ss_pred CchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhH-HHHHHHhhhhhhhhhcccc
Q 007604 274 DPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAM-IPILVATFVPSTMLAQINT 352 (596)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~-~~~~~~~~~~~~~~~~~~~ 352 (596)
. ...+. . .++.+.|++... ...++........+...+.
T Consensus 192 ~--------------------~~~~~--~-------------------~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 230 (382)
T TIGR00902 192 S--------------------QGDSA--F-------------------IALLKNPMNLRFLAAVCLIQGAHAAYYGFSAI 230 (382)
T ss_pred c--------------------ccchh--H-------------------HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 0 001111222221 1112222222222222222
Q ss_pred eeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 007604 353 LFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFT 432 (596)
Q Consensus 353 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~ 432 (596)
+. . +.... ....+.......+..++..++.++ +.|| .++.+.+.++.++.++..+..++.
T Consensus 231 ~l-~-----~~g~s---~~~~g~l~~~~~~~~i~~~~~~~~----l~~r-------~g~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 231 YW-Q-----AAGIS---ASATGLLWGIGVLAEIIIFAFSNK----LFQN-------CSARDLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HH-H-----HCCCC---HhHHHHHHHHHHHHHHHHHHHhHH----HHhh-------CCHHHHHHHHHHHHHHHHHHHHhH
Confidence 21 1 11110 111222333344444444444444 4555 344566788888888887776653
Q ss_pred hhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHH-HHHhHHHHHHhHH
Q 007604 433 ERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSM-TTLGVGNFLSSFL 511 (596)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~ig~~lg~~~ 511 (596)
.+++.++...++.++..++..+....++.+. |++.|++++++++ ...++|..+++.+
T Consensus 291 ---------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~ 348 (382)
T TIGR00902 291 ---------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAF 348 (382)
T ss_pred ---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2556666677999999999999999999988 9999999999987 5678999999999
Q ss_pred HhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHH
Q 007604 512 LSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFV 553 (596)
Q Consensus 512 ~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~ 553 (596)
.|.+.+.. + ...|+..+++.+++.+
T Consensus 349 ~G~l~~~~----------------g-~~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 349 AGFIYPTL----------------G-AGTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHhc----------------c-HHHHHHHHHHHHHHHH
Confidence 99987632 1 2457777777665543
No 67
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.88 E-value=6.3e-20 Score=194.98 Aligned_cols=382 Identities=11% Similarity=-0.021 Sum_probs=237.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTD-KLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
|.+++ ....+..++....+.+.+...+.+ ++|++.+|.+++.+++.++..++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~-s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWI-SVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 44444 444455566666666666666654 7999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
+.+++.+++.... ..++..+++.|++.|++ |...+.....+++++|+++ ||++.
T Consensus 112 i~~~~~~~a~~~~-------------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~ 165 (462)
T PRK15034 112 IPCVWLGIAVQNP-------------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSAL 165 (462)
T ss_pred HHHHHHHHHHccc-------------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHH
Confidence 9888888752000 02788899999999998 6678889999999999986 99999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcc-----c-------------cccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChh
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQ-----D-------------DVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPF 253 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~-----~-------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (596)
++.....++|..+++.+.+.+. . ..+|+.++++..+..++..+..++..++.+. ++...
T Consensus 166 Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~ 242 (462)
T PRK15034 166 GINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRASI 242 (462)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccCH
Confidence 9987666777766554443321 1 2347777766666555444444443332111 11111
Q ss_pred HHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhH
Q 007604 254 TRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAM 333 (596)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~ 333 (596)
++.. ..+| +.+..+..
T Consensus 243 ~~~~----~vlk------------------------------------------------------------~~~~Wlls 258 (462)
T PRK15034 243 ADQL----PVLQ------------------------------------------------------------RLHLWLLS 258 (462)
T ss_pred HHHH----HHhC------------------------------------------------------------CCchhHHH
Confidence 1111 0111 11111111
Q ss_pred HHHHHHhhhhhhhhh-cccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChh
Q 007604 334 IPILVATFVPSTMLA-QINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLL 412 (596)
Q Consensus 334 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~ 412 (596)
+.+ +.....+..+. ..+.+...+. + .........+.++...+..|+.+++.||++++
T Consensus 259 lly-~~tFG~fvg~s~~lp~~~~~~~---~-------~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~----------- 316 (462)
T PRK15034 259 LLY-LATFGSFIGFSAGFAMLAKTQF---P-------DVNILRLAFFGPFIGAIARSVGGAISDKFGGV----------- 316 (462)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHc---C-------hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch-----------
Confidence 111 11222222222 2222211110 1 01111112334566777889999988888776
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccc-----
Q 007604 413 QRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPE----- 487 (596)
Q Consensus 413 ~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~----- 487 (596)
+.+.+++++++++.......... ....+.+.....++.+.++.++.+-..+-++...+|+
T Consensus 317 ~vl~~~~i~~~i~~~~~~l~lp~---------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~ 381 (462)
T PRK15034 317 RVTLINFIFMAIFSALLFLTLPG---------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYR 381 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc---------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhc
Confidence 33555555554443222221100 0013444555555555566667777777777777774
Q ss_pred ----------------hhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHH
Q 007604 488 ----------------SMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLN 551 (596)
Q Consensus 488 ----------------~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~ 551 (596)
+..|..+|+......+|+++-|.+.+...+.+ +++...|+.+.+..+++
T Consensus 382 ~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~---------------g~~~~~~~~~~~~~~~~ 446 (462)
T PRK15034 382 VKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT---------------GSPVGAMKVFLIFYIVC 446 (462)
T ss_pred ccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc---------------CCcHHHHHHHHHHHHHH
Confidence 25788899999999999999998888776544 34456788888888888
Q ss_pred HHHHHHHhhc
Q 007604 552 FVFFLVVAKF 561 (596)
Q Consensus 552 ~~~~~~~~~~ 561 (596)
+++.+.+..|
T Consensus 447 ~~~~w~~y~r 456 (462)
T PRK15034 447 VLLTWLVYGR 456 (462)
T ss_pred HHHHHHHhcc
Confidence 8887776544
No 68
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.88 E-value=8.1e-21 Score=204.71 Aligned_cols=151 Identities=10% Similarity=0.060 Sum_probs=124.6
Q ss_pred HHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCC
Q 007604 56 LVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDIN 135 (596)
Q Consensus 56 l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 135 (596)
...++++ +|.++++.+++.+.+.++..++.++.|+++||+ |||+.+.++.++..++.++++......
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 115 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWAT----------- 115 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccccc-----------
Confidence 3446665 599999999999999999999999999999998 999999999888888877765542100
Q ss_pred CccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcc-c
Q 007604 136 SQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQ-D 214 (596)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~-~ 214 (596)
.+...+++.|++.|++.|...+.....+.|++|+++ |++++++++...++|+.+++.+.+.+. .
T Consensus 116 ---------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 116 ---------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred ---------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 145667788999999999999989999999999886 999999999999999999987776543 3
Q ss_pred cccchhhhHHHHHHHHHHHH
Q 007604 215 DVGWALGYGLPALGLAIAIA 234 (596)
Q Consensus 215 ~~g~~~~f~~~~~~~~~~~~ 234 (596)
..+||..|++.++..++..+
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~ 200 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVAL 200 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHH
Confidence 46899999988776555443
No 69
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=2.6e-21 Score=203.04 Aligned_cols=151 Identities=15% Similarity=0.131 Sum_probs=132.4
Q ss_pred HHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 007604 54 SNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCND 133 (596)
Q Consensus 54 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 133 (596)
.....++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++.
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 81 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------ 81 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh------------
Confidence 3444577889999999999999999999999999999999998 999999999999999998888774
Q ss_pred CCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhh-hhhhhc
Q 007604 134 INSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGN-TVLVYI 212 (596)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~-~~~~~l 212 (596)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.++.+.+.++|..++| .+++.+
T Consensus 82 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~ 143 (379)
T TIGR00881 82 ------------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGI 143 (379)
T ss_pred ------------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHH
Confidence 67788899999999999999999999999999886 99999999999999999999 566677
Q ss_pred cccccchhhhHHHHHHHHHHHHH
Q 007604 213 QDDVGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 213 ~~~~g~~~~f~~~~~~~~~~~~~ 235 (596)
.+..+|++.|++.++..++..+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~ 166 (379)
T TIGR00881 144 AELYSWHWVFIVPGIIAIIVSLI 166 (379)
T ss_pred HhcCCchhHHHHHHHHHHHHHHH
Confidence 77789999998877655444333
No 70
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.88 E-value=6.3e-20 Score=195.10 Aligned_cols=389 Identities=10% Similarity=-0.033 Sum_probs=232.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.+|.+....++...+.....++++.|+++++|.++.+.+++.+.+.++..+++++.|+++||+ |||+.++.+....++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4567777778888888888889999999999999999999999999999999999999999998 999999987766655
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+..........+.. .......+.+++++.+++.+...+....+..|..++ ++..++
T Consensus 81 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~g 136 (396)
T TIGR00882 81 LFAPFFIYVFGPLL----------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--------SNFEYG 136 (396)
T ss_pred HHHHHHHHHhhhHH----------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--------cccccc
Confidence 44332211000000 000223345667888888888888887777664321 445667
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCC
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLP 272 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (596)
......++|.++||.+++.+.+ .+|+.+|++.++..++..+..+...++.++ ++...+. .+. +
T Consensus 137 ~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-------~~~-----~ 199 (396)
T TIGR00882 137 KARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPS----SATVANA-------LGA-----N 199 (396)
T ss_pred hhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCch----hhhhhcc-------ccc-----c
Confidence 7777889999999999888765 699999998876655544433332222111 0000000 000 0
Q ss_pred CCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhh-hccc
Q 007604 273 IDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTML-AQIN 351 (596)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~-~~~~ 351 (596)
. ...+..+.. +..+.|.+...+...+.....+... .+.+
T Consensus 200 ------------------~---~~~~~~~~~-------------------~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 239 (396)
T TIGR00882 200 ------------------A---SAFSLKLAL-------------------ELFRQRKFWMFVLYVVGVACVYDVFDQQFA 239 (396)
T ss_pred ------------------c---CCCCHHHHH-------------------HHHcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000000 0001122222222111111111111 1222
Q ss_pred ceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 007604 352 TLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASF 431 (596)
Q Consensus 352 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~ 431 (596)
.+...... +...+ ....+...+...+...+......++.||+++| +.+.++.++.++++.....
T Consensus 240 ~y~~~~~~--~~~~~---~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----------~~l~~~~~l~~l~~~~~~~ 303 (396)
T TIGR00882 240 NFFTSFFA--TPQQG---TRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----------NALLIAGTIMSVRIIGSSF 303 (396)
T ss_pred HHHHHhcc--ccccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------hhHHHHHHHHHHHHHHHHh
Confidence 22211110 00100 00112233444445555556666666666555 3366666666666655443
Q ss_pred HhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHH-HHHHHhHHHHHHhH
Q 007604 432 TERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSY-SMTTLGVGNFLSSF 510 (596)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~ig~~lg~~ 510 (596)
. .+.+++++..++.+++..........+..+..|++.+++..+. ++....+|+.+++.
T Consensus 304 ~---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~ 362 (396)
T TIGR00882 304 A---------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLST 362 (396)
T ss_pred c---------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHH
Confidence 2 2445556667778888777766777788888899999887766 67889999999999
Q ss_pred HHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHH
Q 007604 511 LLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFL 556 (596)
Q Consensus 511 ~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~ 556 (596)
+.+.+.+.. ++...|.+.+++.++..++..
T Consensus 363 l~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 363 LAGNMYDSI----------------GFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred hHHHHHHhc----------------ccHHHHHHHHHHHHHHHHHHH
Confidence 999887522 346677777777666555443
No 71
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.88 E-value=1.1e-19 Score=192.76 Aligned_cols=168 Identities=11% Similarity=0.093 Sum_probs=139.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMI 115 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 115 (596)
.+..+..+....+.......+|. +.+++|.+..+.+++.+.+.++..+++++.|+++||+ |||+.++++.++..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~ 83 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHH
Confidence 33444444455555545555554 4568999999999999999999999999999999998 999999999999988888
Q ss_pred HHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHH
Q 007604 116 VLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWM 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (596)
++..+. +...++++|++.|++.+...+...+++.|.+|+++ |+++.++.+
T Consensus 84 ~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~ 133 (392)
T PRK10473 84 LCSLAE------------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLN 133 (392)
T ss_pred HHHHhC------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 877653 56678889999999999989999999999999886 999999999
Q ss_pred HHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHH
Q 007604 196 FSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 196 ~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (596)
...++|..++|.+++.+.+..||++.|++.++..++..+.
T Consensus 134 ~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 134 GITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888889999998887655444433
No 72
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.87 E-value=1.5e-19 Score=193.53 Aligned_cols=393 Identities=12% Similarity=0.108 Sum_probs=228.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcch-hHHHHHHHHHHHHHHHH
Q 007604 38 VVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGR-YWTFVIAFFFYLMGMIV 116 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr-k~~~~~~~~~~~i~~~~ 116 (596)
+.+..++...++-...++++.|+++++|++..+.|++.+++.++..+++++.|.++||+ || |+++.++.++..++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHH
Confidence 44445555555556679999999999999999999999999999999999999999998 65 77888887777777766
Q ss_pred HHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCC-------CCChhhhhhhhh
Q 007604 117 LALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFD-------EFEPKEKAHKLS 189 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~-------~~~~~~~~~r~~ 189 (596)
..+.. +...+++.|++.+++.+...+...++..+... ++. .|.+
T Consensus 86 ~~~~~------------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~-----~~~r 136 (418)
T TIGR00889 86 AAQVT------------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDF-----PPIR 136 (418)
T ss_pred HHHhc------------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcC-----CCee
Confidence 66543 56677788888888877666665554332221 111 1444
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCC-ChhHHHHHHHHHHHHhcC
Q 007604 190 FFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAG-SPFTRMAKVIVAAIRKRN 268 (596)
Q Consensus 190 ~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 268 (596)
.++ .+|.++||.+++.+.....|. +|++.++..++..+..+. .++.++.++++ ....+.
T Consensus 137 ~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~------------ 196 (418)
T TIGR00889 137 VMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALT-LPDIPVAKSTAKMSIKVM------------ 196 (418)
T ss_pred eeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhc-CCCCCCCccccccCHHHH------------
Confidence 444 478888888888774433344 455555444443333222 22211110000 000000
Q ss_pred CCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhH-HHHHHHhhhhhhhh
Q 007604 269 VPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAM-IPILVATFVPSTML 347 (596)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~-~~~~~~~~~~~~~~ 347 (596)
. ..+. .+..+.+.+... +..++.........
T Consensus 197 -------------~-------------------~~~~----------------~~~~k~~~~~~~~~~~~~~~~~~~~~~ 228 (418)
T TIGR00889 197 -------------L-------------------GLDA----------------FILFKNKRMAIFFFFSMLLGAPLQITN 228 (418)
T ss_pred -------------h-------------------hhhH----------------HHHhcCCCeeeHHHHHHHHHhHHHHHH
Confidence 0 0000 000001111111 11111111111111
Q ss_pred hcccceeeeeeccccccCCCccc-ccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHH
Q 007604 348 AQINTLFVKQGTTLDRAIGSSFK-IPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIM 426 (596)
Q Consensus 348 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~ 426 (596)
...+.+..... .+.....++. ...+....+..+..++...+.+++.||+++| +.+.++.++.++++
T Consensus 229 ~~~~~~~~~~g--~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----------~~l~~~~~~~~v~~ 295 (418)
T TIGR00889 229 IFGNGFLHEFG--RNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----------KVMLLSLVAWALRF 295 (418)
T ss_pred HhHHHHHHHhc--ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHH
Confidence 11111111100 0000000000 0113334445555566666777766666655 44777777777766
Q ss_pred HHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHH-HHHhHHH
Q 007604 427 VIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSM-TTLGVGN 505 (596)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~ig~ 505 (596)
........ ...+.+.+++..++.+++++...+....++.|.+|++.||+++|+.+ ....+|.
T Consensus 296 ~l~~~~~~-----------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~ 358 (418)
T TIGR00889 296 GFFAYGDP-----------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGS 358 (418)
T ss_pred HHHHHcCc-----------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHH
Confidence 55544210 01123345556788899999988998999999999999999999997 6788999
Q ss_pred HHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccccccCC
Q 007604 506 FLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKAEV 568 (596)
Q Consensus 506 ~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~ 568 (596)
.+|+.+.+.+.+..+..++ .+++..|.+.+++.++..++++++.++..+..+.
T Consensus 359 ~iGp~l~G~l~~~~g~~~~----------~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~~ 411 (418)
T TIGR00889 359 LLGYILSGVMVEKMFAYGT----------FDWQTMWLFFAGYIAILAVLFMIFFKYSHNAIKV 411 (418)
T ss_pred HHHHHHHHHHHHHhccccC----------CchHHHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 9999999998764421110 1356678888888787777777777655444443
No 73
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=1.7e-19 Score=190.14 Aligned_cols=154 Identities=12% Similarity=0.138 Sum_probs=134.8
Q ss_pred HHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 007604 51 GISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPP 130 (596)
Q Consensus 51 ~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 130 (596)
...+.+|.+. +++|.++.+.+++.+++.++..++.+++|+++||+ |||+++.++.++..++.+++..+.
T Consensus 9 ~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~--------- 77 (377)
T PRK11102 9 MYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ--------- 77 (377)
T ss_pred HHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc---------
Confidence 3446666665 47999999999999999999999999999999998 999999999999999988887764
Q ss_pred CCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhh
Q 007604 131 CNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLV 210 (596)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~ 210 (596)
+...+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+....+|..++|.+++
T Consensus 78 ---------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~ 136 (377)
T PRK11102 78 ---------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGG 136 (377)
T ss_pred ---------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67778899999999999999999999999999876 999999999999999999999999
Q ss_pred hccccccchhhhHHHHHHHHHHHHHH
Q 007604 211 YIQDDVGWALGYGLPALGLAIAIAIF 236 (596)
Q Consensus 211 ~l~~~~g~~~~f~~~~~~~~~~~~~~ 236 (596)
++.+..+|++.|++.++..++..+..
T Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 137 WLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 99888899999988776655554433
No 74
>PRK10133 L-fucose transporter; Provisional
Probab=99.87 E-value=3.7e-19 Score=191.49 Aligned_cols=152 Identities=11% Similarity=0.068 Sum_probs=122.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
...+..+.+..+...+........+|. +++++|.++.+.+++.+.+.++..+++++.|+++||+ |||+++.+++.+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~ 102 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 344555555555555555545555554 5889999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++.+++..+... .+...++++|+++|+|.|...+...+++.|..|+++ |....
T Consensus 103 ~~~~l~~~~~~a---------------------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~ 155 (438)
T PRK10133 103 LGAALFWPAAEI---------------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRL 155 (438)
T ss_pred HHHHHHHHHHhc---------------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHH
Confidence 999876422100 177889999999999999999999999998765553 66668
Q ss_pred HHHHHHHHHHHHHhhhhhhhc
Q 007604 192 NWWMFSIFFGTLLGNTVLVYI 212 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l 212 (596)
+..+....+|..+|+.+++.+
T Consensus 156 s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 156 NLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999877654
No 75
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=2.5e-21 Score=198.00 Aligned_cols=180 Identities=12% Similarity=0.120 Sum_probs=160.6
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHH
Q 007604 29 RGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFF 108 (596)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 108 (596)
+..++.+.++++.+.+++..-|.+-+.+ .-.++.+|.+++..|.+.+.+.+.+.+..|+.|+++||+ .||+++.+|..
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHH
Confidence 3445668888899999999998776644 456788999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhh
Q 007604 109 FYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKL 188 (596)
Q Consensus 109 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (596)
++.+++++++++. ..+++.+.|.+.|+|.+.+.|.++++++|.||+.+ |+
T Consensus 107 iW~~Av~~~~fs~------------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs 156 (493)
T KOG1330|consen 107 IWTLAVFASGFSN------------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RS 156 (493)
T ss_pred HHHHHHHHHHHHH------------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hh
Confidence 9999999999985 78899999999999999999999999999999997 99
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHHHHHHHHHHHhcC
Q 007604 189 SFFNWWMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAIAIFLAGT 240 (596)
Q Consensus 189 ~~~~~~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 240 (596)
+.++++|+++++|..+|.++++++....+ ||++|+..+++.++..++.++..
T Consensus 157 ~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 157 RVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred HHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhc
Confidence 99999999999999999999999988776 99999999887665555544443
No 76
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=3.7e-19 Score=191.53 Aligned_cols=355 Identities=14% Similarity=0.133 Sum_probs=220.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh---cchhH-HHHHHHHHHHHHHHHHH
Q 007604 43 VFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY---LGRYW-TFVIAFFFYLMGMIVLA 118 (596)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~-~~~~~~~~~~i~~~~~~ 118 (596)
+..++....+..+++.|+++.+|+++.+.|.+.++..+...+..|+.|+++||. +|||| .++++....+++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 444555566678899999999999999999999999999999999999999983 38855 56677777777777776
Q ss_pred HHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHH
Q 007604 119 LSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSI 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 198 (596)
...+.+ .......+.+.+++.+++.+...+...++..|..++++ +|++..++.+...
T Consensus 89 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~R~~~~~~~~~~~ 145 (437)
T TIGR00792 89 TTPDFS------------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPR-----ERESLSTFRRFGA 145 (437)
T ss_pred hCCCCC------------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHH-----HHHHHHHHHHHHH
Confidence 542111 00134455666777888888888888899999886543 4999999988888
Q ss_pred HHHHHHhhhhhhhcc-------ccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCC
Q 007604 199 FFGTLLGNTVLVYIQ-------DDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPL 271 (596)
Q Consensus 199 ~ig~~l~~~~~~~l~-------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (596)
++|..+++.+.+.+. +..+|++++.+.++..++..+..+...++.+++.+++++.
T Consensus 146 ~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~------------------ 207 (437)
T TIGR00792 146 TLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEK------------------ 207 (437)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccccc------------------
Confidence 888877765544432 2468999888777665544443333222211100000000
Q ss_pred CCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhccc
Q 007604 272 PIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQIN 351 (596)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~ 351 (596)
+ . ...+.. +...+.|.+...+...+.....+.......
T Consensus 208 ---------------------~----~--~~~~~~---------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (437)
T TIGR00792 208 ---------------------K----L--SLKQIF---------------KALFKNDQLLILCLAYLFYNLAFNIKNGVQ 245 (437)
T ss_pred ---------------------C----C--CHHHHH---------------HHHhCCHHHHHHHHHHHHHHHHHHHHcchh
Confidence 0 0 000000 000111222222221111111111111122
Q ss_pred ceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 007604 352 TLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASF 431 (596)
Q Consensus 352 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~ 431 (596)
.++...... + ....+.+.....+..+++.++..++.+|+++| +.+.++.++.+++++...+
T Consensus 246 ~~~~~~~~~-~-------~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----------~~~~~~~~~~~~~~~~~~~ 306 (437)
T TIGR00792 246 VYYFTYVLG-D-------PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----------ILFAGGILLMVLGYLIFFF 306 (437)
T ss_pred heeEeeecC-C-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHH
Confidence 222221111 0 00112233445666777777777777666655 3466676666666655544
Q ss_pred HhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhcc-------chhHHHHHHHHHHHHhHH
Q 007604 432 TERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAP-------ESMKSLGTSYSMTTLGVG 504 (596)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~~ig 504 (596)
.. .+.+.+++..++.+++.+...+..+++..|..| ++.+|+++|++++...+|
T Consensus 307 ~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g 366 (437)
T TIGR00792 307 AG--------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLG 366 (437)
T ss_pred cc--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHH
Confidence 21 133445556677888988888888999888765 567899999999999999
Q ss_pred HHHHhHHHhhhhccc
Q 007604 505 NFLSSFLLSTVSDIT 519 (596)
Q Consensus 505 ~~lg~~~~~~i~~~~ 519 (596)
..+++.+.+.+.+..
T Consensus 367 ~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 367 QALAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999998654
No 77
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=6.3e-20 Score=186.51 Aligned_cols=391 Identities=12% Similarity=0.028 Sum_probs=267.9
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHH
Q 007604 29 RGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFF 108 (596)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 108 (596)
+.++|.++ +....+..++..+.+.+.+..++++++|+|+.|.++++.+..+...+..++-|.+.||+ |-|++..++++
T Consensus 10 ~~~~~~L~-~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~ 87 (417)
T COG2223 10 RIARRNLW-LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSML 87 (417)
T ss_pred cchhHHHH-HHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHH
Confidence 34445555 44445666777777888888899999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhh
Q 007604 109 FYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKL 188 (596)
Q Consensus 109 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (596)
+.++-.+..+++...+ +.+.+++.+++.|++- +..+...++++.+||+++ +|
T Consensus 88 l~~IP~~~~~~a~~~~---------------------~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~------qG 139 (417)
T COG2223 88 LLLIPCLGLAFAVTYP---------------------STWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEK------QG 139 (417)
T ss_pred HHHHHHHHHHHHccCC---------------------chHHHHHHHHHHhccc-ceehcccccccccCChhh------hh
Confidence 9999998888885322 4568888888999884 456777888999999996 99
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhcccccc---chhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHH
Q 007604 189 SFFNWWMFSIFFGTLLGNTVLVYIQDDVG---WALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIR 265 (596)
Q Consensus 189 ~~~~~~~~~~~ig~~l~~~~~~~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (596)
.+.+++. ..|+|..+...+++.+....| |+.+..+.++..++..+.+++..++.+...+..++... ..+
T Consensus 140 ~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~--~~~----- 211 (417)
T COG2223 140 LALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP--AQL----- 211 (417)
T ss_pred HHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch--hHH-----
Confidence 9999999 889999999999999888888 99999988888777776666665554332221111100 000
Q ss_pred hcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhh
Q 007604 266 KRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPST 345 (596)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~ 345 (596)
+.+...+..-....+....+.-+.
T Consensus 212 --------------------------------------------------------~~v~~~~~~W~lsllY~~tFG~Fv 235 (417)
T COG2223 212 --------------------------------------------------------KAVFSNKDTWLLSLLYFATFGGFV 235 (417)
T ss_pred --------------------------------------------------------HHHhcCcchHHHHHHHHHHHHHHH
Confidence 000101111111111122222222
Q ss_pred hhh-cccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHH
Q 007604 346 MLA-QINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHII 424 (596)
Q Consensus 346 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~ 424 (596)
.+. +.+.++..+.. .+ ....+.+....++...+.-|+.+++.||++.+ +...+.+..+++
T Consensus 236 gfs~~l~~~~~~~fg-~~-------~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-----------rv~~~~f~~~~~ 296 (417)
T COG2223 236 GFSAYLPMYLVTQFG-LS-------PVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-----------RVTLAVFVGMAL 296 (417)
T ss_pred HHHHHHHHHHHHhcC-CC-------hhhHHHHHHHHHHHHHHHHhccchhhhhccch-----------hHHHHHHHHHHH
Confidence 222 12222222211 11 22234566677778888889999988888777 335666666776
Q ss_pred HHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHH
Q 007604 425 IMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVG 504 (596)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig 504 (596)
+....++..... ....+.+..+..++..++..++-+-..+-++....|+ +.|.+.|+....+++|
T Consensus 297 ~~~~l~~~~~~~--------------~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lG 361 (417)
T COG2223 297 AAALLSLFLTGF--------------GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLG 361 (417)
T ss_pred HHHHHHcccccc--------------ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhcccc
Confidence 766665532100 0013444455555666666666666666777766764 7889999999999999
Q ss_pred HHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007604 505 NFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFY 562 (596)
Q Consensus 505 ~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 562 (596)
++.-|...+...+.+ +.+...|+++....+++.++.+....+.
T Consensus 362 Gf~lp~~~g~~~~~t---------------g~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 362 GFFLPLAFGVSLDLT---------------GSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred ccchhHHHHHHHHhc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999888887655 2456678888888888887777766543
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.86 E-value=3.4e-19 Score=214.69 Aligned_cols=361 Identities=12% Similarity=0.065 Sum_probs=217.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCh--hhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGT--VKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
+.+..+++..++..+...+....+..++...++.+. ...+++.+++.++..++++++|+++||+ |||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHH
Confidence 455556666666666665555566666665666544 4468889999999999999999999998 9999999998776
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
+++.++..++... .+.+.+++.|++.|++.+...++..++++|++|+++ |+++
T Consensus 88 ~~~~~~~~~~~~~---------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~ 140 (1146)
T PRK08633 88 VGLTLLIVLAYYL---------------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRA 140 (1146)
T ss_pred HHHHHHHHHHHHH---------------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhh
Confidence 6665554443211 157789999999999999999999999999999986 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccc--------c-cchhhhHHHHHHH-HHHHHHHHhcCCceeccCCCCChhHHHHHHH
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDD--------V-GWALGYGLPALGL-AIAIAIFLAGTPFYRHKKPAGSPFTRMAKVI 260 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~--------~-g~~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (596)
+++...+.++|.++|+.+++++... + +|++.+.+.++.. ++++++.+.. ++.+...+......
T Consensus 141 ~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------ 213 (1146)
T PRK08633 141 NGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRL-PKVPAAAPEVFDKK------ 213 (1146)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcC-cCCCCCCccccccc------
Confidence 9999999999999999999988765 2 2333333333222 2222222222 22111100000000
Q ss_pred HHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhH-HHHHHH
Q 007604 261 VAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAM-IPILVA 339 (596)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~-~~~~~~ 339 (596)
...... ...+.. ..+.+.+.+... +...+.
T Consensus 214 ----------~~~~~~------------------------~~~~~~---------------~~l~~~~~~~~~~~~~~~~ 244 (1146)
T PRK08633 214 ----------KYLFPK------------------------LLWRNL---------------KLLRSDRVLWLAIIGLSYF 244 (1146)
T ss_pred ----------ccccHH------------------------HHHHHH---------------HHHhcCcHHHHHHHHHHHH
Confidence 000000 000000 000011111111 111111
Q ss_pred hhhhhhhhhcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHH
Q 007604 340 TFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGL 419 (596)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~ 419 (596)
....+.....++.++... ...+. ....+.+.....++.+++..+.+++.++..++ +.+.++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~-~g~s~------~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----------~~~~~~~ 306 (1146)
T PRK08633 245 WFISQLAQANFPAYAKEV-LGLDN------TFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----------GLVPLGA 306 (1146)
T ss_pred HHHHHHHHHhhHHHHHHH-hCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----------cchhHHH
Confidence 111111111111111111 00010 00122334444555555555655544333322 2355566
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHH
Q 007604 420 VIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMT 499 (596)
Q Consensus 420 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 499 (596)
++.+++++.+.+. .+.+.+++..++.|++.++..+...+++.+.+|++.||+++|+.++
T Consensus 307 ~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~ 365 (1146)
T PRK08633 307 LGLALSLFLLPTA---------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNF 365 (1146)
T ss_pred HHHHHHHHHHHHh---------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHH
Confidence 6666665555442 2455666777888999999999999999999999999999999999
Q ss_pred HHhHHHHHHhHHHhhhh
Q 007604 500 TLGVGNFLSSFLLSTVS 516 (596)
Q Consensus 500 ~~~ig~~lg~~~~~~i~ 516 (596)
...+|..+++.+.+.+.
T Consensus 366 ~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 366 LQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999988877766553
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.86 E-value=1.9e-19 Score=216.51 Aligned_cols=351 Identities=11% Similarity=0.021 Sum_probs=202.4
Q ss_pred HHhhhcCCCh-hhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHH--HHHHHHHHHHHhhccCCCCCCCCCCC
Q 007604 59 YLTDKLHHGT-VKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF--YLMGMIVLALSVSLSGLKPPPCNDIN 135 (596)
Q Consensus 59 yl~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~ 135 (596)
.++...+.+. ...++..+++.+...++++++|+++||+ |||+++.....+ ......+..+..
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~-------------- 105 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL-------------- 105 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 3333443333 4567788889999999999999999999 999986442222 111222222221
Q ss_pred CccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccc
Q 007604 136 SQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDD 215 (596)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~ 215 (596)
.+.+.++++|+++|++.+.+.|+..+++.|++|+++ |+.+.++.+++.++|.++||.++|++...
T Consensus 106 ---------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~ 170 (1140)
T PRK06814 106 ---------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATIS 170 (1140)
T ss_pred ---------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 178889999999999999999999999999999986 99999999999999999999999999998
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCccccc
Q 007604 216 VGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIG 295 (596)
Q Consensus 216 ~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (596)
.+|++.|++.++..++++++.+..++. +..++..+......+.....+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------------------------------- 218 (1140)
T PRK06814 171 GNFVILVALLMGIAVLGWLASLFIPKT-GNAAPDLKIDRNIIRSTITLL------------------------------- 218 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhCCCC-CCCCCCCeeccchHHHHHHHH-------------------------------
Confidence 999998855544444444333332221 111110000000000000000
Q ss_pred CCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhH-HHHHHHhhhhhhhhhcccceeeeeeccccccCCCccccccc
Q 007604 296 STQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAM-IPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPA 374 (596)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 374 (596)
..+.+.+.+... +...++...+.....+++.+.... .+.+ ....+
T Consensus 219 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~g~~-------~~~~g 264 (1140)
T PRK06814 219 --------------------------KYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKET-LGGD-------ENVAT 264 (1140)
T ss_pred --------------------------HHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-cCCc-------hHHHH
Confidence 000111111111 111122222222222222222111 0001 11223
Q ss_pred ccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCccee
Q 007604 375 SLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPL 454 (596)
Q Consensus 375 ~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (596)
.+.....++.+++..+.+++.++..++ +.+..+.++.++..+.+.+.... .......-..-..-....
T Consensus 265 ~~~~~~~~g~~ig~~~~g~l~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~ 332 (1140)
T PRK06814 265 LFLAVFSVGVAVGSFLASKLSEGRITL-----------LYVPIGALLMGLFGLDLAFASSS-VPAEPAQLKSILVFLSKR 332 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCceee-----------eeehHHHHHHHHHHHHHHhcccc-cccccccccchhhhhccc
Confidence 344555666677777766654322222 11333333333333322221000 000000000000000012
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhc
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSD 517 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~ 517 (596)
+.+.+++..+++|++.++..+...+++.+.+|++.||+++|+.++.+.++..+++.+.+.+..
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 333 HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777888999999999999999999999999999999999999999999999888753
No 80
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.85 E-value=1.2e-19 Score=190.34 Aligned_cols=160 Identities=13% Similarity=0.065 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
..+..++..+......+.....+|.++++++|+++.+.+++.+.+.++..++++++|+++||+ |||+++.++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 345566666666667777777788789999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
.++++++.. +...++++|+++|++.+. .+...++++|.+|+++ |+++.++
T Consensus 81 ~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------r~~~~~~ 130 (366)
T TIGR00886 81 CLWAGLAVQ-----------------------SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI------QGTALGL 130 (366)
T ss_pred HHHHHHHhh-----------------------hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh------hhHHHHH
Confidence 888877630 566788899999999665 4567889999999886 9999999
Q ss_pred HHHHHHHHHHHhhhhhhhccc----------cccchhhhHH
Q 007604 194 WMFSIFFGTLLGNTVLVYIQD----------DVGWALGYGL 224 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~----------~~g~~~~f~~ 224 (596)
.....++|..+++.+++.+.. ..+||+.|++
T Consensus 131 ~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 131 AAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 888888888888777665543 3479999844
No 81
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.85 E-value=1e-18 Score=184.91 Aligned_cols=335 Identities=8% Similarity=-0.013 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchh----HHHHHHHHHHHHHHHHHH
Q 007604 43 VFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRY----WTFVIAFFFYLMGMIVLA 118 (596)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk----~~~~~~~~~~~i~~~~~~ 118 (596)
++..+++..+.+++|.|++ ++|.+..+.|++.+++.+...+++++.|.++||+ ||+ +.+.++..+. .+...
T Consensus 14 ~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~---~~~~~ 88 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF---AVAFW 88 (382)
T ss_pred HHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH---HHHHH
Confidence 3334455566788889986 5899999999999999999999999999999998 984 3332222211 11111
Q ss_pred HHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHH
Q 007604 119 LSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSI 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 198 (596)
... .+.+.+++.|++.|++.+...|...++..++ . + +|++.++..+...
T Consensus 89 ~~~-----------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~-~------~~~~a~~~~~~~~ 137 (382)
T PRK11128 89 FGA-----------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTW-Q-K------QIGLDYGKVRLWG 137 (382)
T ss_pred Hhc-----------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHH-H-h------hccCCcchHHHHH
Confidence 111 1677888899999999999999888887776 2 2 2788888888888
Q ss_pred HHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhh
Q 007604 199 FFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQEL 278 (596)
Q Consensus 199 ~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (596)
++|.++||.+++++.+.+|||..|++.++..++..+..+ ..++. ++++++.++ ..+
T Consensus 138 ~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~----------------~~~---- 193 (382)
T PRK11128 138 SIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQL-LRPTI---MPQGESRQQ----------------ESA---- 193 (382)
T ss_pred HHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-ccCCC---CCccccccc----------------ccc----
Confidence 999999999999999989999999877765444333222 22211 111100000 000
Q ss_pred hhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHH-HHHHhhhhhhhhhcccceeeee
Q 007604 279 YELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIP-ILVATFVPSTMLAQINTLFVKQ 357 (596)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~ 357 (596)
..+. + .++.+.|.+...+. .++....+.......+.+. .+
T Consensus 194 -----------------~~~~--~-------------------~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~ 234 (382)
T PRK11128 194 -----------------GWPA--W-------------------KALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYW-QA 234 (382)
T ss_pred -----------------ccch--H-------------------HHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHH-HH
Confidence 0000 0 00111122222211 1111122211222111211 11
Q ss_pred eccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007604 358 GTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRL 437 (596)
Q Consensus 358 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~ 437 (596)
.+.+ ....+.+.....+..++...+.+++.+|++ ..+.+.++.++.+++++..+..
T Consensus 235 -~g~s-------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~-----------~~~~l~~~~~~~~~~~~~~~~~----- 290 (382)
T PRK11128 235 -AGYS-------ASTIGYLWSLGVVAEVLIFAFSNRLFRRWS-----------ARDLLLLSAICGVVRWGLMGST----- 290 (382)
T ss_pred -CCCC-------HhHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------HHHHHHHHHHHHHHHHHHHHhh-----
Confidence 1111 111222333444444444455555443333 3355677777777776655543
Q ss_pred hhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHH-HHHhHHHHHHhHHHhhhh
Q 007604 438 SVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSM-TTLGVGNFLSSFLLSTVS 516 (596)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~ig~~lg~~~~~~i~ 516 (596)
.+.+.+++..++.|++.++..+....++.+. |++.++++++..+ ....+|..+|+.+.+.+.
T Consensus 291 ----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~ 353 (382)
T PRK11128 291 ----------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLY 353 (382)
T ss_pred ----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2455666677889999999999999998887 5555789999887 556788899999999887
Q ss_pred c
Q 007604 517 D 517 (596)
Q Consensus 517 ~ 517 (596)
+
T Consensus 354 ~ 354 (382)
T PRK11128 354 Q 354 (382)
T ss_pred H
Confidence 5
No 82
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.85 E-value=3.2e-18 Score=186.83 Aligned_cols=386 Identities=12% Similarity=0.097 Sum_probs=233.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh----cchhHH-HHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY----LGRYWT-FVI 105 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~Grk~~-~~~ 105 (596)
.+|+.+.++...+......+.....++.|++ +.|.+.++.+... ..... +++.++.|.++||+ +||||. +++
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHcccccCCCCchHHHHH
Confidence 3455666777777777777777788888877 4599999998863 23333 36899999999995 288885 556
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhh
Q 007604 106 AFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKA 185 (596)
Q Consensus 106 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 185 (596)
+.+..+++...+++... ..+...+.+.+++.+++.+...+...++..|++|+++
T Consensus 87 ~~i~~~~~~~~~a~~~~---------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~----- 140 (491)
T PRK11010 87 TQLLLLVAIAAMGFLEP---------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE----- 140 (491)
T ss_pred HHHHHHHHHHHHHHcCC---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh-----
Confidence 66667677666665421 1256778888999999999999999999999999886
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhhccc-cccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHH
Q 007604 186 HKLSFFNWWMFSIFFGTLLGNTVLVYIQD-DVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAI 264 (596)
Q Consensus 186 ~r~~~~~~~~~~~~ig~~l~~~~~~~l~~-~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (596)
|+++.++...+.++|.++++.+.+++.+ ..|||.+|++.++..++..+..+..++. ++.+++++...+. .
T Consensus 141 -rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~-~~~~~~~~~~~~~---~---- 211 (491)
T PRK11010 141 -RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEP-TDTIPVPKTLEQA---V---- 211 (491)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCC-ccccccccchhhh---H----
Confidence 9999999999999999999999998888 5799999998887655554443332211 1100000000000 0
Q ss_pred HhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhh
Q 007604 265 RKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPS 344 (596)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~ 344 (596)
. + .+.+ . .++.+........++......
T Consensus 212 ----------------~----------------~--~l~~---~---------------~~~~~~~~~ll~~~l~~~~~~ 239 (491)
T PRK11010 212 ----------------V----------------A--PLRD---F---------------FGRNNAWLILLLIVLYKLGDA 239 (491)
T ss_pred ----------------H----------------H--HHHH---H---------------HcCcCHHHHHHHHHHHHHHHH
Confidence 0 0 0000 0 000011111111111112222
Q ss_pred hhhhcccceeeeeeccccccCCCcccccccccc-cchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHH
Q 007604 345 TMLAQINTLFVKQGTTLDRAIGSSFKIPPASLT-GFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHI 423 (596)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~ 423 (596)
......++++... .+.+. ...+... ....++.+++..+.+++.||+++| +.+.++.++.+
T Consensus 240 ~~~~~~~~~l~~~-~G~s~-------~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~-----------~~l~i~~~l~~ 300 (491)
T PRK11010 240 FAMSLTTTFLIRG-VGFDA-------GEVGLVNKTLGLLATIVGALYGGILMQRLSLF-----------RALMIFGILQG 300 (491)
T ss_pred HHHHHHHHHHHHh-cCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----------HHHHHHHHHHH
Confidence 2222222222111 11111 1112222 233456667777888877777765 22333334333
Q ss_pred HHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhH
Q 007604 424 IIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGV 503 (596)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~i 503 (596)
++.+.+..... ...+.+.+....++..+..++..+..+++..+..|++.+++..|+.+....+
T Consensus 301 l~~l~~~~l~~-----------------~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~l 363 (491)
T PRK11010 301 VSNAGYWLLSI-----------------TDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAV 363 (491)
T ss_pred HHHHHHHHHHh-----------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 33322211100 0113333344445555555566667788888999999999999999999999
Q ss_pred HHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 007604 504 GNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVV 558 (596)
Q Consensus 504 g~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 558 (596)
|..+++.+.+.+.+.. ++...|.+.+++.+++++..+.+
T Consensus 364 g~~~~~~~~G~l~~~~----------------G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 364 GRVYVGPVAGWFVEAH----------------GWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHh----------------ChHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888887522 34567777777777776666555
No 83
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.3e-19 Score=193.84 Aligned_cols=377 Identities=13% Similarity=0.131 Sum_probs=244.1
Q ss_pred hcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccccc
Q 007604 63 KLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKA 142 (596)
Q Consensus 63 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (596)
+++++..+.+++.+.+..|..++++++|+++||+ |-|+++.++.++.++++++...+...
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~------------------- 126 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASI------------------- 126 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 6889999999999999999999999999999999 99999999999999999999988642
Q ss_pred ccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccc-ccchhh
Q 007604 143 STLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDD-VGWALG 221 (596)
Q Consensus 143 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~-~g~~~~ 221 (596)
+...+.+.|+++|++.|...|+...+.+.+.|+.| |+++.++.+.+..+|.+++..++|++.+. .||+.+
T Consensus 127 ---~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~si 197 (466)
T KOG2532|consen 127 ---GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSI 197 (466)
T ss_pred ---cchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchH
Confidence 34467899999999999999999999999999998 99999999999999999999999999988 999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchh
Q 007604 222 YGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLR 301 (596)
Q Consensus 222 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (596)
|++.++..++..++++....+.+.+++. .+..|+.+..+....+....+ .
T Consensus 198 fY~~g~~g~i~~~~w~~~~~d~P~~h~~-----------------------is~~El~~I~~~k~~~~~~~~----~--- 247 (466)
T KOG2532|consen 198 FYVFGIVGLIWFILWFLFYSDSPSKHPN-----------------------ISEKELKYIEKGKSEAHVKKK----P--- 247 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCC-----------------------CCHHHHHHHHhcccccccCCC----C---
Confidence 9998876554444443333222221111 111111111110000000000 0
Q ss_pred hhhhhhhhcCCCCCcccccchhhhhhhhHHh-HHHHHHHhhhhhhhhhcccceeeeeeccccccCCCcccccccccccch
Q 007604 302 FFNKAAVKTGATNPWILCSVSQVEETTQMLA-MIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFV 380 (596)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 380 (596)
..||+ .+-....+.. .+..+.....++...++.|+++.. ..+++ -..++..+++.
T Consensus 248 -----------~vP~~-----~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~-VL~f~-------v~~~G~~salP 303 (466)
T KOG2532|consen 248 -----------PVPYK-----AILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKE-VLGFD-------VRETGFLSALP 303 (466)
T ss_pred -----------CCCHH-----HHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HhCCC-------hhhhhHHHHHH
Confidence 01221 0011111222 222223334444444444554422 22222 12457777888
Q ss_pred hHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHH--HHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHH
Q 007604 381 TLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRM--GIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFI 458 (596)
Q Consensus 381 ~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l--~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (596)
.+...+...+.+.+.|++.+|. .. ....+++ .++....++.++.+++... .+. +
T Consensus 304 ~l~~~~~k~~~g~lsD~l~~~~--ls--~t~~rkifn~i~~~~~ai~l~~l~~~~~-------------------~~~-~ 359 (466)
T KOG2532|consen 304 FLAMAIVKFVAGQLSDRLTFRI--LS--ETTVRKIFNTIAFGGPAVFLLVLAFTSD-------------------EHR-L 359 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc--Cc--hHhHHHHHHhHHHHHHHHHHHeeeecCC-------------------Ccc-h
Confidence 8888888888899888888872 11 1222333 3344445555555554321 111 1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchh
Q 007604 459 MLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLD 538 (596)
Q Consensus 459 li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~ 538 (596)
..+..+.++.+.......+..-.....-+++.+..+|+.+....+..+++|.+++.+.. .+ .. ....
T Consensus 360 ~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~~--t~----------~eW~ 426 (466)
T KOG2532|consen 360 LAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVT-DN--TR----------EEWR 426 (466)
T ss_pred HHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeC-CC--CH----------HHHH
Confidence 22222333333333333333333333146899999999999999999999999998863 10 11 2346
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 007604 539 YYYAFFAILNVLNFVFFLVVA 559 (596)
Q Consensus 539 ~~f~~~~~~~~v~~~~~~~~~ 559 (596)
.+|++.+++.+++.++|.++.
T Consensus 427 ~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 427 IVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHHHHHHhchheeEee
Confidence 789999999998888877774
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.84 E-value=1.5e-18 Score=183.19 Aligned_cols=343 Identities=11% Similarity=0.077 Sum_probs=198.6
Q ss_pred HHHHHHhhhcC--CChhhhhhHHHH--H---HHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 007604 55 NLVMYLTDKLH--HGTVKSANNVTN--W---GGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLK 127 (596)
Q Consensus 55 ~l~~yl~~~lg--~~~~~~~~~~~~--~---~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 127 (596)
....++.++.. .++++.+.+.+. + .++..+++++.|+++||+ |||+++.++.++..++.++++++.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~-- 90 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYAT-- 90 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhh--
Confidence 44455554543 444555544432 2 233346889999999998 9999999999999999988887642110
Q ss_pred CCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhh
Q 007604 128 PPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNT 207 (596)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~ 207 (596)
........++++|+++|++.+...+...+++.|.+|+++ |+...++.+.+..+|..+++.
T Consensus 91 --------------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~ 150 (394)
T TIGR00883 91 --------------IGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAAL 150 (394)
T ss_pred --------------hHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHH
Confidence 000012357889999999999999999999999999886 999999999999999999987
Q ss_pred hhhhcc--------ccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhh
Q 007604 208 VLVYIQ--------DDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELY 279 (596)
Q Consensus 208 ~~~~l~--------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (596)
+...+. +.++||++|++.++..+++.......++. ++.+. . +++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~----------~~~~----------- 203 (394)
T TIGR00883 151 TVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEET-----PVFEK-A----------QEKH----------- 203 (394)
T ss_pred HHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCC-----hhHHH-H----------Hhcc-----------
Confidence 765542 35789999988776554443332211110 00000 0 0000
Q ss_pred hhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhh-hhhHHhHHHHH-HHhhhhhhhhhcccceeeee
Q 007604 280 ELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEE-TTQMLAMIPIL-VATFVPSTMLAQINTLFVKQ 357 (596)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 357 (596)
+....+ .. +..++ ++.+....... +....++......+.+...+
T Consensus 204 -------------~~~~~~-~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (394)
T TIGR00883 204 -------------KKKRGP-IR--------------------ETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQT 249 (394)
T ss_pred -------------ccccCC-HH--------------------HHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000000 00 00011 11122111111 11111111111111221111
Q ss_pred eccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHH-HHHHHHHHHHHHHhhhh
Q 007604 358 GTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGL-VIHIIIMVIASFTERYR 436 (596)
Q Consensus 358 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~-~l~~~~~~~~~~~~~~~ 436 (596)
...+ ....+.......+..++..++.+++.||++||+ .+..+. +....+.........
T Consensus 250 -~g~~-------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----------~~~~~~~~~~~~~~~~~~~~~~-- 308 (394)
T TIGR00883 250 -LGLS-------ANSALLVLMLSLILFFITIPLSGALSDRIGRRP-----------VLIIFTVLAALLAVPLLMALLD-- 308 (394)
T ss_pred -cCCC-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH-----------HHHHHHHHHHHHHHHHHHHHhc--
Confidence 1111 111223334455666777778888777776662 122222 222222111111100
Q ss_pred hhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHH-HHHHHhHHHHHHhHHHhhh
Q 007604 437 LSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSY-SMTTLGVGNFLSSFLLSTV 515 (596)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~ig~~lg~~~~~~i 515 (596)
..+.+..+...++.+++.+...+..++++.|.+|++.|++++|+ ++..+.+|..+++.+.+.+
T Consensus 309 ----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l 372 (394)
T TIGR00883 309 ----------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAAL 372 (394)
T ss_pred ----------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHH
Confidence 12334445556777888888888899999999999999999998 4566778888999999888
Q ss_pred hcc
Q 007604 516 SDI 518 (596)
Q Consensus 516 ~~~ 518 (596)
.+.
T Consensus 373 ~~~ 375 (394)
T TIGR00883 373 VAM 375 (394)
T ss_pred HHH
Confidence 753
No 85
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.83 E-value=1.3e-18 Score=182.08 Aligned_cols=324 Identities=10% Similarity=0.099 Sum_probs=207.5
Q ss_pred HHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCC
Q 007604 56 LVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDIN 135 (596)
Q Consensus 56 l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 135 (596)
+...+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.. .+.
T Consensus 22 ~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~-------------- 85 (355)
T TIGR00896 22 LLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP-------------- 85 (355)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc--------------
Confidence 33456779999999999999999999999999999999998 99999999988887777665 332
Q ss_pred CccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccc
Q 007604 136 SQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDD 215 (596)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~ 215 (596)
+...+++.|++.|++.+...+..+.+..|.+|+ + |+++.++++...++|..+++.+++.+.+.
T Consensus 86 ----------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 86 ----------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-R------VGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-h------hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 667788999999999998888888888888864 3 99999999999999999999888888765
Q ss_pred c--cchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCccc
Q 007604 216 V--GWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYR 293 (596)
Q Consensus 216 ~--g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (596)
. +||+.|.+.++..++..... . ++.+++++++++. . +
T Consensus 149 ~~~~w~~~f~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~------------------~--------------------~ 187 (355)
T TIGR00896 149 SGGHWQQALAWWALPALLALLAW-I--PQVRRRVAANQTT------------------T--------------------R 187 (355)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHH-h--hhhccccCCCCCC------------------C--------------------C
Confidence 4 39988876654433332221 1 1111111000000 0 0
Q ss_pred ccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHH-HHHHHhhhhhhhhhcccceeeeeeccccccCCCccccc
Q 007604 294 IGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMI-PILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIP 372 (596)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 372 (596)
. ..++ -.++ +...... ...+....++....+.+.+.... +.+ ...
T Consensus 188 ~-------------------~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--g~~-------~~~ 233 (355)
T TIGR00896 188 L-------------------TPVR-----IWRS-PLAWQVTVFFGLQSGLYYSLIGWLPAILISH--GAS-------AAT 233 (355)
T ss_pred C-------------------CCch-----hhcC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCC-------HHH
Confidence 0 0000 0011 1111111 11111222222222222222111 111 112
Q ss_pred ccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcc
Q 007604 373 PASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQV 452 (596)
Q Consensus 373 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (596)
.+.......++.+++.++.+++.||+.+|+ +.+.++.++.+++.+...+..
T Consensus 234 ~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----------~~~~~~~~~~~~~~~~~~~~~------------------- 284 (355)
T TIGR00896 234 AGSLLALMQLAQAASALLIPALARRVKDQR----------GIVAVLAVLQLVGLCGLLFAP------------------- 284 (355)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhccch----------HHHHHHHHHHHHHHHHHHHhh-------------------
Confidence 234455566777777778788766663331 234556666666665554431
Q ss_pred eehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhcc-chhHHHHHHHHHHHHhHHHHHHhHHHhhhhccc
Q 007604 453 PLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAP-ESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDIT 519 (596)
Q Consensus 453 ~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~ 519 (596)
.+..+ ...++.|++.+...|...+...+..+ ++.++..+++.+....++..+++.+.+.+.+.+
T Consensus 285 -~~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 285 -MHGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred -hhHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111 13467789998888887777765554 677899999999999999999999999987644
No 86
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.82 E-value=2.4e-17 Score=175.86 Aligned_cols=169 Identities=13% Similarity=0.127 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
++.+....+...+. +++...+...+++++|.+..+.+++.+.+.++..++.++.|++.||+ |||+++.++.++++++.
T Consensus 5 ~~~~~~~f~~~G~~-~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFA-NDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHH-HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 33344333333333 34554555667889999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
++...+... .+...+.++|++.|+|.|...+...+++.+..|+++ |++..++.
T Consensus 83 ~l~~~~~~~---------------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~ 135 (410)
T TIGR00885 83 FLFWPAAEI---------------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLA 135 (410)
T ss_pred HHHHHHHhh---------------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHH
Confidence 776544211 167788899999999999999999999999988875 88889999
Q ss_pred HHHHHHHHHHhhhhhhhcccc--------------------------ccchhhhHHHHHHHHHH
Q 007604 195 MFSIFFGTLLGNTVLVYIQDD--------------------------VGWALGYGLPALGLAIA 232 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~l~~~--------------------------~g~~~~f~~~~~~~~~~ 232 (596)
+...++|..+||.+++.+... .+||++|.+.++..++.
T Consensus 136 ~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~ 199 (410)
T TIGR00885 136 QSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAV 199 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888766321 36999998776654433
No 87
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.81 E-value=1.7e-17 Score=173.75 Aligned_cols=157 Identities=12% Similarity=0.095 Sum_probs=118.4
Q ss_pred HHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh----cchhHHH-HHHHHHHHHHHHHHHHHhhccCCC
Q 007604 53 SSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY----LGRYWTF-VIAFFFYLMGMIVLALSVSLSGLK 127 (596)
Q Consensus 53 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~Grk~~~-~~~~~~~~i~~~~~~~~~~~~~~~ 127 (596)
.......+.+++|+|.++.++.... .+...+ .++.|.++||+ +||||.+ +.+.++.++....+++...
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~----- 79 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP----- 79 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc-----
Confidence 3434444556889999999999655 333444 88999999997 4899975 5566666666555554321
Q ss_pred CCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhh
Q 007604 128 PPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNT 207 (596)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~ 207 (596)
..+...++...++.+++.+...++..+++.|++|+++ |+.+.++...+.++|.++++.
T Consensus 80 ----------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~ 137 (356)
T TIGR00901 80 ----------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGS 137 (356)
T ss_pred ----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHH
Confidence 1255556666667788888888999999999998876 999999999999999999999
Q ss_pred hhhhcccccc--------chhhhHHHHHHHHHHHHHHHh
Q 007604 208 VLVYIQDDVG--------WALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 208 ~~~~l~~~~g--------~~~~f~~~~~~~~~~~~~~~~ 238 (596)
+++++....| ||.+|++.++..++..+..+.
T Consensus 138 l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 138 LALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 9988887777 999999888766665544443
No 88
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.80 E-value=1.8e-16 Score=169.01 Aligned_cols=163 Identities=12% Similarity=0.061 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh----cchhH-HHHHHHHHHHHHHHHH
Q 007604 43 VFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY----LGRYW-TFVIAFFFYLMGMIVL 117 (596)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~Grk~-~~~~~~~~~~i~~~~~ 117 (596)
+...+.+.-...-+|.|+++ .|++.++.|++...... ++..+++|+++||+ +|||| .++++.++.+++...+
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 33444444456778889885 59999999999776655 69999999999997 26665 6777777777777766
Q ss_pred HHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHH
Q 007604 118 ALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFS 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (596)
.+... ..+.+.+++..++.++..+...++..+++.|++|+++ |+++.++...+
T Consensus 86 ~~~~~---------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~g 138 (402)
T PRK11902 86 AFCPP---------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVLG 138 (402)
T ss_pred HhcCc---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHHH
Confidence 65421 1245666666667788888888999999999999886 99999999999
Q ss_pred HHHHHHHhhhhhhhcccc-ccchhhhHHHHHHHHHHHHH
Q 007604 198 IFFGTLLGNTVLVYIQDD-VGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 198 ~~ig~~l~~~~~~~l~~~-~g~~~~f~~~~~~~~~~~~~ 235 (596)
.++|..+++.+++++.+. .|||..|++.++..++..+.
T Consensus 139 ~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 139 YRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 999999999888888775 59999999887765544443
No 89
>PRK09669 putative symporter YagG; Provisional
Probab=99.79 E-value=2.4e-16 Score=170.26 Aligned_cols=356 Identities=10% Similarity=0.078 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhh----hcchhHH-HHHHHHHHHHHH
Q 007604 40 VYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEA----YLGRYWT-FVIAFFFYLMGM 114 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~----~~Grk~~-~~~~~~~~~i~~ 114 (596)
+..+..++.+..+..+++.|+++.+|+++.++|.+.++..+...+..|+.|+++|| + ||||- ++++.+..+++.
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~~~i~~ 94 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIPFGVVC 94 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHHHHHHH
Confidence 44455566666677889999999999999999999999999999999999999999 5 87554 556666666666
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
+++...+ .+. .......+++..++.+++..+......++.+|..++.+ +|.+..++.
T Consensus 95 ~l~f~~p---~~~---------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~-----eR~~l~~~r 151 (444)
T PRK09669 95 LLTFYTP---DFG---------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR-----ERHSLQSWR 151 (444)
T ss_pred HHHHhCC---CCC---------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH-----HHHHHHHHH
Confidence 5443321 110 01134445555556666666777777899999887654 488888888
Q ss_pred HHHHHHHHHHhhhhhhh----ccc---cccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhc
Q 007604 195 MFSIFFGTLLGNTVLVY----IQD---DVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKR 267 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~----l~~---~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (596)
....++|..+++.+... +.. ..||+..+.+.+++.++..+..+...++. .+++++++ ....+.++.
T Consensus 152 ~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~-~~~~~~~~-~~~~~~~~~----- 224 (444)
T PRK09669 152 FALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER-YTPEVDNS-SSVWKDLKL----- 224 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe-cCCCCcCC-CCHHHHHHH-----
Confidence 88888888877654332 221 24677777666655444433333222221 11110000 000000000
Q ss_pred CCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhh
Q 007604 268 NVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTML 347 (596)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 347 (596)
..+.|.+...+...+.........
T Consensus 225 --------------------------------------------------------~~~n~~~~~l~~~~~~~~~~~~~~ 248 (444)
T PRK09669 225 --------------------------------------------------------LLGNSQWRIMFIFNVVLLTAVVTR 248 (444)
T ss_pred --------------------------------------------------------HhCCchHHHHHHHHHHHHHHHHHH
Confidence 001111222211111111111111
Q ss_pred hcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHH
Q 007604 348 AQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMV 427 (596)
Q Consensus 348 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~ 427 (596)
.....++..... ... +. ...+.....+..++..++..++.+|+++| +.+..+.++.++..+
T Consensus 249 ~~~~~y~~~~~~--~~~-----~~-~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----------~~~~~~~~~~~~~~~ 309 (444)
T PRK09669 249 GGATLYYVNYVL--LRP-----DL-ATLFLVTGMIAGLFGALLSERLLGKFDRV-----------RAFKWTIVAFVILSA 309 (444)
T ss_pred hhhhheeeeeec--CCH-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHhChH-----------HHHHHHHHHHHHHHH
Confidence 111222222111 100 10 11122233455556667777766666555 334444444433322
Q ss_pred HHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhcc-------chhHHHHHHHHHHH
Q 007604 428 IASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAP-------ESMKSLGTSYSMTT 500 (596)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~ 500 (596)
...+.. +.+.+.+++..++.+++.+...+..++++.|.++ ++..|...|++++.
T Consensus 310 ~~~~~~-------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~ 370 (444)
T PRK09669 310 LIFFIP-------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFA 370 (444)
T ss_pred HHHHhC-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHH
Confidence 222211 1244455666688999999999999999998875 34467889999999
Q ss_pred HhHHHHHHhHHHhhhhcccc
Q 007604 501 LGVGNFLSSFLLSTVSDITK 520 (596)
Q Consensus 501 ~~ig~~lg~~~~~~i~~~~~ 520 (596)
..+|..+|+.+.+.+.+..+
T Consensus 371 ~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 371 IKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999887553
No 90
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.79 E-value=2.1e-16 Score=169.16 Aligned_cols=438 Identities=11% Similarity=0.038 Sum_probs=249.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhh----hcchhHHHHHH-H
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEA----YLGRYWTFVIA-F 107 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~----~~Grk~~~~~~-~ 107 (596)
++++.+....+..++++-...++++.|+ +++|.+..+.+.+..+..+...+.+|+.|+++|| + ||||.++++ .
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~ 81 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGA 81 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHH
Confidence 4567777777778888777788888886 4799999999999999999999999999999995 7 999998875 5
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhh
Q 007604 108 FFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHK 187 (596)
Q Consensus 108 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 187 (596)
...+++.++++.+.++...... ...............++..+..++.....+...++++|.+|+++ +++
T Consensus 82 ~~~~~~l~ll~~~~~~~~~~~~-------~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~----~~~ 150 (477)
T TIGR01301 82 ALVAFAVILIGFAADIGHLFGD-------NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDA----RRT 150 (477)
T ss_pred HHHHHHHHHHHhCchhhhhccc-------cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchh----HHH
Confidence 5555666666654321100000 00000000111334455556677888888889999999999885 124
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhc--ccc-------------ccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCh
Q 007604 188 LSFFNWWMFSIFFGTLLGNTVLVYI--QDD-------------VGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSP 252 (596)
Q Consensus 188 ~~~~~~~~~~~~ig~~l~~~~~~~l--~~~-------------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (596)
+.+.++.+...++|+.+|+.++++. .+. .+.+..|++.++..+++.++.....++.+..++++.+
T Consensus 151 ~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~ 230 (477)
T TIGR01301 151 RIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFI 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccch
Confidence 6899999999999999999887764 111 1578899988877776666554443332211111000
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhh-hhhHH
Q 007604 253 FTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEE-TTQML 331 (596)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~l 331 (596)
..+ .+..+ +.+..+.+. + .+ +..++ -|.+.
T Consensus 231 ~~~-------------~~~~~-------------------~~~~~~~~~--~----------i~-----~~~~~mP~~m~ 261 (477)
T TIGR01301 231 NSE-------------AAPPS-------------------KHGEEAFFG--E----------LF-----GAFKYLPRPVW 261 (477)
T ss_pred hhh-------------ccccc-------------------ccchhhhHH--H----------HH-----HHHHHCCHHHH
Confidence 000 00000 000000000 0 00 00111 13344
Q ss_pred hHHHHHHHhhhhhhhhhcccceeeeee-ccccccCCCcccccc-----cccccchhHHHHHHHHHHhHHHHHhhhcccCC
Q 007604 332 AMIPILVATFVPSTMLAQINTLFVKQG-TTLDRAIGSSFKIPP-----ASLTGFVTLSMLVCVVLYDRCFVRITRRWTKN 405 (596)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~-----~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~ 405 (596)
+++.+.++.-+-|..+..+.+-+..+. ..-+..-. -.... ......+.+... +.+.+..++.||...+
T Consensus 262 ~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~--~~y~~gvr~G~~~l~~~s~~~~----i~s~~l~~l~~~~g~~ 335 (477)
T TIGR01301 262 ILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG--AKYDDGVRAGAFGLMLNSVVLG----ITSIGMEKLCRGWGAG 335 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcch--hHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhccc
Confidence 455555555555555544444332211 00011000 01111 111122233333 3333444445543111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhh--hhhcc-CccccCCcceeh-hHHHHHHHHHHHHHHHHHhhhhHHHH
Q 007604 406 PRGITLLQRMGIGLVIHIIIMVIASFTERYRLS--VAKDH-GIVEKGQQVPLT-IFIMLPQFVLMGTADAFLEVAKIEFF 481 (596)
Q Consensus 406 ~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~-~~~li~~~~l~g~~~~~~~~~~~~~~ 481 (596)
...-.++.++.+++++...+...-..+ ..+.+ ..+. .+.. .+..+..+.+.|+..+..+..-++++
T Consensus 336 ------k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~ 405 (477)
T TIGR01301 336 ------KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLP----PPTGIKASALIVFAILGIPLAITYSIPFALA 405 (477)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccC----cchhhHHHHHHHHHHhhHHHHHHHHHhHHHH
Confidence 122256777777777666654320000 00000 0000 0111 35566777889999999998889999
Q ss_pred Hhhccc--hhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHh
Q 007604 482 YDQAPE--SMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVA 559 (596)
Q Consensus 482 ~~~~P~--~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~ 559 (596)
.+..|+ +..|..+|+.|.+-.+...+.....+.+....+ ++....+.+.++.++++.++.+...
T Consensus 406 s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g--------------~~~~~~~~~~gv~~~~aa~~~~~~~ 471 (477)
T TIGR01301 406 SIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG--------------GGNLPAFVVGAVAAFVSGLLALILL 471 (477)
T ss_pred HHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC--------------CCCeeHHHHHHHHHHHHHHHHHHhC
Confidence 999995 455999999999999999999887777543221 1223466776777777777777766
Q ss_pred hcc
Q 007604 560 KFY 562 (596)
Q Consensus 560 ~~~ 562 (596)
++.
T Consensus 472 ~~~ 474 (477)
T TIGR01301 472 PRP 474 (477)
T ss_pred CCC
Confidence 554
No 91
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.78 E-value=5.9e-16 Score=168.49 Aligned_cols=363 Identities=10% Similarity=0.041 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhh----hhcch-hHHHHHHHHHHHHHH
Q 007604 40 VYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAE----AYLGR-YWTFVIAFFFYLMGM 114 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~Gr-k~~~~~~~~~~~i~~ 114 (596)
+..+..++.+..+..+++.|+++.+|+++...|.+..+.-+...+..|+.|+++| |+ || |+-++++.+..+++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHH
Confidence 4555666777777889999999999999999999999999999999999999999 66 98 455556666666666
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
.++...... +.......+.+..++.+++.........++.+|..++.+ +|.+..++.
T Consensus 92 ~llf~~p~~------------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~-----eR~~l~~~~ 148 (473)
T PRK10429 92 FLLFSAHLF------------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR-----EREQLVPYP 148 (473)
T ss_pred HHHHcCCCC------------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH-----HHHHHHHHH
Confidence 555322100 001123334445556678888888888999999996554 489888887
Q ss_pred HHHHHHHHHHhhhhhhhc----c---ccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhc
Q 007604 195 MFSIFFGTLLGNTVLVYI----Q---DDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKR 267 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~l----~---~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (596)
....++|+.+++.+...+ . +..+|+....+.++..++..+..+...++.. ++++.++.
T Consensus 149 ~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~-~~~~~~~~-------------- 213 (473)
T PRK10429 149 RFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY-SSDNQVSA-------------- 213 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecC-Cccccccc--------------
Confidence 777777766655443322 1 1234666555555544433333333222211 00000000
Q ss_pred CCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhh
Q 007604 268 NVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTML 347 (596)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~ 347 (596)
+ +++....+.. +.+.+.|.++..+...+.........
T Consensus 214 -----~-----------------------~~~~~~~~~~---------------~~~~~n~~~~~ll~~~~~~~~~~~~~ 250 (473)
T PRK10429 214 -----E-----------------------GSHLTLKDIV---------------ALIYKNDQLSCLLGMALAYNIASNII 250 (473)
T ss_pred -----c-----------------------ccCCCHHHHH---------------HHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000000000 00001122222222222111222222
Q ss_pred hcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHH
Q 007604 348 AQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMV 427 (596)
Q Consensus 348 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~ 427 (596)
.....++..+... +. . ....+.....+..+++.++..++.+|+++| +.+.++.++..++.+
T Consensus 251 ~~~~~y~~~y~~~-~~------~-~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----------~~~~~~~~~~~~~~~ 311 (473)
T PRK10429 251 NGFAIYYFTYVIG-DA------D-LFPYYLSYAGAANLVTLILFPRLVKSLSRR-----------ILWAGASIFPVLSCG 311 (473)
T ss_pred hhheeeEEEEECC-CH------H-HHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----------HHHHHHHHHHHHHHH
Confidence 2222222222111 10 0 112233444566677777777766666655 334455555444443
Q ss_pred HHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhcc-------chhHHHHHHHHHHH
Q 007604 428 IASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAP-------ESMKSLGTSYSMTT 500 (596)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~ 500 (596)
........ .+.+.+.+++..++.+++.+...+..+++..|.++ .+..|...|.+++.
T Consensus 312 ~~~~~~~~----------------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~ 375 (473)
T PRK10429 312 VLLLMGLA----------------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMV 375 (473)
T ss_pred HHHHHhcc----------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHH
Confidence 33221000 01234455566678889999999999999999976 44567799999999
Q ss_pred HhHHHHHHhHHHhhhhccc
Q 007604 501 LGVGNFLSSFLLSTVSDIT 519 (596)
Q Consensus 501 ~~ig~~lg~~~~~~i~~~~ 519 (596)
.-+|..+++.+.+.+.+..
T Consensus 376 ~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 376 VKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9999999999999988655
No 92
>PRK09848 glucuronide transporter; Provisional
Probab=99.78 E-value=1.2e-15 Score=164.91 Aligned_cols=362 Identities=8% Similarity=0.044 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh---cchhHHH-HHHHHHHHHH
Q 007604 38 VVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY---LGRYWTF-VIAFFFYLMG 113 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~~~-~~~~~~~~i~ 113 (596)
-.+..+..++.+..+..+++.|+++.+|+++.+.|.+.+...+...+..++.|+++||. +||||.. .++.+...+.
T Consensus 13 yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 13 YSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred hccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 33455566666666778888999999999999999999999999999999999999994 3777755 4554444443
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
..++..... ... ........++..++.+++.+...+...++..+..++.+ +|.+..++
T Consensus 93 ~~~~~~~~~--~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~r~~~~~~ 150 (448)
T PRK09848 93 SVLVFWVPT--DWS---------------HSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ-----SRARLGAA 150 (448)
T ss_pred HHHHHhCcC--CCC---------------cchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH-----HHHHHHHH
Confidence 333321110 000 00122333445566788888888888888888877754 37776665
Q ss_pred HHHH-----HHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcC
Q 007604 194 WMFS-----IFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRN 268 (596)
Q Consensus 194 ~~~~-----~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (596)
..++ .+++..++|.+.+.........+..+. .+..+++.+..+......+++.++++......+..+
T Consensus 151 r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~------- 222 (448)
T PRK09848 151 RGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWT-IVLAIAGMVLYFICFKSTRENVVRIVAQPSLKISLQ------- 222 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH-HHHHHHHHHHHHHHHcCcEeccCCCccCCCHHHHHH-------
Confidence 5443 345666667665543221111111111 111222222222111111111100000000000000
Q ss_pred CCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhh
Q 007604 269 VPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLA 348 (596)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~ 348 (596)
.+.+.|.+.......+.....+....
T Consensus 223 ------------------------------------------------------~l~~n~~f~~~~~~~~~~~~~~~~~~ 248 (448)
T PRK09848 223 ------------------------------------------------------TLKRNRPLFMLCIGALCVLISTFAVS 248 (448)
T ss_pred ------------------------------------------------------HHhCCchHHHHHHHHHHHHHHHHHHh
Confidence 00111222222211111111111122
Q ss_pred cccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 007604 349 QINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVI 428 (596)
Q Consensus 349 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~ 428 (596)
....++.....+.+ ............+..+++.++..++.+|+++| +.+.+|.++.+++.+.
T Consensus 249 ~~~~~~~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----------~~~~~g~~~~~i~~~~ 310 (448)
T PRK09848 249 ASSLFYVRYVLNDT-------GLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-----------NTFLIGALLGTCGYLL 310 (448)
T ss_pred hhheeeEeeecCCh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHH
Confidence 22222222211111 10011111112344555666666655544443 5567777777777655
Q ss_pred HHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccch-------hHHHHHHHHHHHH
Q 007604 429 ASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPES-------MKSLGTSYSMTTL 501 (596)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~-------~rg~~~g~~~~~~ 501 (596)
..+.. ..+.+.+++..++.++|+++..+..+++..+..|.+ .+|.++|++++.+
T Consensus 311 ~~~~~-------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~ 371 (448)
T PRK09848 311 FFWVS-------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTR 371 (448)
T ss_pred HHHcC-------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHH
Confidence 54421 124455566678899999999999999999888754 4699999999999
Q ss_pred hHHHHHHhHHHhhhhcccc
Q 007604 502 GVGNFLSSFLLSTVSDITK 520 (596)
Q Consensus 502 ~ig~~lg~~~~~~i~~~~~ 520 (596)
.+|..+|+.+.+.+.+..+
T Consensus 372 klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 372 KCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 9999999999998876543
No 93
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=6.8e-17 Score=160.02 Aligned_cols=420 Identities=11% Similarity=0.057 Sum_probs=243.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007604 45 ERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLS 124 (596)
Q Consensus 45 ~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~ 124 (596)
+-.......+.+..-++...|.+..+..++......+..+++..+|.++|++ |||+.+.+..+...+...+-..+.
T Consensus 89 ad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~sp--- 164 (528)
T KOG0253|consen 89 ADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGASP--- 164 (528)
T ss_pred HHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCCC---
Confidence 3334444555566667778899999999999999999999999999999998 999999888777766666555442
Q ss_pred CCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHH
Q 007604 125 GLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLL 204 (596)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l 204 (596)
|...+.+.|.+.|+|.|+ .|...++..|..|... |....-.. ....+|.++
T Consensus 165 ---------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~v~ 215 (528)
T KOG0253|consen 165 ---------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQVF 215 (528)
T ss_pred ---------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHHHH
Confidence 777888999999999999 8999999999999886 77776666 777899998
Q ss_pred hhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhH
Q 007604 205 GNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLE 284 (596)
Q Consensus 205 ~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (596)
...+.=.+...+||||.+........+.....++..+.-+..-.++++.+ ....+....+.++.+.|.-..+....++.
T Consensus 216 ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~k-AletL~kiArmNg~qlplgvl~~s~~~~~ 294 (528)
T KOG0253|consen 216 EALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYK-ALETLHKIARMNGKQLPLGVLESSAIDRQ 294 (528)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHH-HHHHHHHHHHhcCCCCCcceeeeehhhhh
Confidence 88776666677899988777665444444444444433333333344433 33344445555666666443333333222
Q ss_pred HhhhcC----cccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhccccee------
Q 007604 285 YYAQRG----KYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLF------ 354 (596)
Q Consensus 285 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------ 354 (596)
++.+.. ..+-+..+.....|.-. +.-++++++..+..+...+.+|...-....++
T Consensus 295 e~e~~~~~~~~~~a~ke~rg~~~nLls---------------p~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c 359 (528)
T KOG0253|consen 295 EQEESDLDDSKSSAAKEVRGGTTNLLS---------------PKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDAC 359 (528)
T ss_pred hhhhhchhhhhhccccccccchHhhcC---------------hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCcc
Confidence 211111 11111111111111100 01122334444443344444443332111111
Q ss_pred ----eeeeccccc----cCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHH
Q 007604 355 ----VKQGTTLDR----AIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIM 426 (596)
Q Consensus 355 ----~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~ 426 (596)
-..+.+++. .....-++.+.++ ..+.-+-+..+..+++++++|| +.|...+++.++..
T Consensus 360 ~~~~r~~p~e~e~~~~c~~s~~~dYrdlli---tslaefPGlLIt~~iverlGRK-----------kTMal~l~~f~ifl 425 (528)
T KOG0253|consen 360 PLYNRFLPTELETRANCPLSVAKDYRDLLI---TSLAEFPGLLITGVIVERLGRK-----------KTMALSLILFGIFL 425 (528)
T ss_pred ccchhcchhHHHhhhcCCccchhHHHHHHH---HHHhhCCchhHHHHHHHHhcch-----------hHHHHHHHHHHHHH
Confidence 001111111 0000001111111 2222223334455666668888 33666666666555
Q ss_pred HHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHH
Q 007604 427 VIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNF 506 (596)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 506 (596)
+....... -+ .+....+..-+.....+...+.|..|.+|+..|+++.|....++++|++
T Consensus 426 fll~~c~~-------------------rn--~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI 484 (528)
T KOG0253|consen 426 FLLTTCKT-------------------RN--AYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGI 484 (528)
T ss_pred HHHHHhcC-------------------cc--hhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhh
Confidence 44433211 01 1111123333444456677888999999999999999999999999999
Q ss_pred HHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 007604 507 LSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKA 566 (596)
Q Consensus 507 lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~ 566 (596)
+.|++. ...... ....-.++++..+++.+...++=.++++|.
T Consensus 485 ~~p~iA-~~~e~s-----------------~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 485 FSPVIA-MRAELS-----------------TSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred hhhHHH-HHhccc-----------------eeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 999998 443211 112234455555666665555555666654
No 94
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.77 E-value=6.1e-16 Score=170.61 Aligned_cols=140 Identities=11% Similarity=0.127 Sum_probs=125.7
Q ss_pred hhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccc
Q 007604 62 DKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRK 141 (596)
Q Consensus 62 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (596)
+..+.+........+++.+|..+|+++.|.++||+ |||+++++++++..++.++.+++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~-------------------- 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAP-------------------- 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhC--------------------
Confidence 45667788888999999999999999999999996 999999999999999999999885
Q ss_pred cccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhh
Q 007604 142 ASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALG 221 (596)
Q Consensus 142 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~ 221 (596)
+...+++.|++.|++.++.......+++|.++++. |+.+.++ ......++.+++.+++++.. +||+.
T Consensus 170 ----~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~ 236 (521)
T KOG0255|consen 170 ----NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWL 236 (521)
T ss_pred ----cHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHH
Confidence 88999999999999999999999999999999997 9999999 77888888888888888887 79999
Q ss_pred hHHHHHHHHHHHHH
Q 007604 222 YGLPALGLAIAIAI 235 (596)
Q Consensus 222 f~~~~~~~~~~~~~ 235 (596)
+++..+..++.++.
T Consensus 237 ~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 237 FWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888766555544
No 95
>PTZ00207 hypothetical protein; Provisional
Probab=99.77 E-value=3.1e-15 Score=163.54 Aligned_cols=168 Identities=7% Similarity=-0.044 Sum_probs=124.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
+|..+...++.+.+.. ..|+.. .....+++++|++..+.+++.+... ....+.+++|+++||+ |||+++.++.+++
T Consensus 26 Rw~~lva~~~~~~~~g-~~y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~ 101 (591)
T PTZ00207 26 RFALLVLGAFCSICTS-FMYAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVF 101 (591)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 3443443344433332 234333 4445688899999999999887744 3446777889999998 9999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.+|.++++++.+-. ...+.+.+++.|++.|+|.+...+.+...+.++||++ ||.+
T Consensus 102 ~iG~ll~ala~~~~------------------i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~-------RG~a 156 (591)
T PTZ00207 102 CLGTLLFALTFQEV------------------IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSN-------RGAV 156 (591)
T ss_pred HHHHHHHHHHhccc------------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhh-------hHHH
Confidence 99999998863100 0127888899999999999998888999999999843 9999
Q ss_pred HHHHHHHHHHHHHH-hhhhhhhccccccchhhhHHHHHHH
Q 007604 191 FNWWMFSIFFGTLL-GNTVLVYIQDDVGWALGYGLPALGL 229 (596)
Q Consensus 191 ~~~~~~~~~ig~~l-~~~~~~~l~~~~g~~~~f~~~~~~~ 229 (596)
.++...+..+|+++ +++..+++. .+|+..|++.++..
T Consensus 157 ~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~ 194 (591)
T PTZ00207 157 VAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFA 194 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHH
Confidence 99999999999975 555555554 35777676665443
No 96
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.77 E-value=1.5e-22 Score=218.85 Aligned_cols=389 Identities=14% Similarity=0.100 Sum_probs=222.6
Q ss_pred hhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHH
Q 007604 70 KSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGT 149 (596)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (596)
+.++..+...++..+|.+++|+++||+ |||++++++.++..++.++.++++.. .+...
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~---------------------~~~~~ 104 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY---------------------NNFWM 104 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc---------------------ccccc
Confidence 467889999999999999999999998 99999999999999999999887411 16778
Q ss_pred HHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccc---cccchhhhHHHH
Q 007604 150 FFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQD---DVGWALGYGLPA 226 (596)
Q Consensus 150 ~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~---~~g~~~~f~~~~ 226 (596)
+.++|++.|++.|+..+..+.++.|..|++. |+...++.+....+|..++..+.-.+.. ..+||..+++.+
T Consensus 105 ~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~ 178 (451)
T PF00083_consen 105 LLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGA 178 (451)
T ss_pred ccccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccc
Confidence 8999999999999999999999999999987 9999999999999999888766544433 245999998887
Q ss_pred HHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchh--hhh
Q 007604 227 LGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLR--FFN 304 (596)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 304 (596)
+..++.++..... ||+|+|+...++.+++++...+....+..+ ..+
T Consensus 179 ~~~l~~~~~~~~~--------------------------------pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~ 226 (451)
T PF00083_consen 179 IPSLLVLLLRFFL--------------------------------PESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEE 226 (451)
T ss_pred ccccccccccccc--------------------------------ccccceecccccccccccccccccccccccccccc
Confidence 6654443332222 222333322222222222211111000000 000
Q ss_pred --hhhhhc-CCCCCcccccchhhhhhhhHHhHHHHHHHhh-hhhhhhhcccceeeeeeccccccCCCccccccc-ccccc
Q 007604 305 --KAAVKT-GATNPWILCSVSQVEETTQMLAMIPILVATF-VPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPA-SLTGF 379 (596)
Q Consensus 305 --~~~~~~-~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 379 (596)
....+. .....|....++.. .+++.+..+.+..... ..+....++.+.... +.+ ..+. .....
T Consensus 227 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~-------~~~----~~~~~~~~~~ 294 (451)
T PF00083_consen 227 IKAEKKESQESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFE-------NAG----ISNSFLATLI 294 (451)
T ss_pred cccccccccccceeeeecccccc-cccccccccccccccccccccccccccccccc-------ccc----cccccccccc
Confidence 000000 00001111111110 1122222221111111 110011111111111 111 1111 12222
Q ss_pred hhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHH-HHhhhhhhhhhccCccccCCcceehhHH
Q 007604 380 VTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIAS-FTERYRLSVAKDHGIVEKGQQVPLTIFI 458 (596)
Q Consensus 380 ~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (596)
..+..+++..+...+.|+++||. .+..+.++++++.+.++ ...... +. ....+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~GRr~-----------~~i~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~ 351 (451)
T PF00083_consen 295 LGLVNFLGTLLAIFLIDRFGRRK-----------LLIIGLLLMAICSLILGIIFFLGV-SS-----------SSWWSILS 351 (451)
T ss_pred ccccccccccccccccccccccc-----------cccccccccccccccccccccccc-cc-----------cccccccc
Confidence 23333333444446666777773 24455555555554443 111000 00 00012222
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchh
Q 007604 459 MLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLD 538 (596)
Q Consensus 459 li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~ 538 (596)
+....+..........+..+.+..|.+|++.|+++.|+....+++++.+++.+.+.+.... +..
T Consensus 352 i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~----------------~~~ 415 (451)
T PF00083_consen 352 IVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL----------------GGW 415 (451)
T ss_pred ceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------------ccc
Confidence 2222222233333556777889999999999999999999999999999998877765311 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 007604 539 YYYAFFAILNVLNFVFFLVVAKFYVYKAEVS 569 (596)
Q Consensus 539 ~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 569 (596)
..+++++++.++..++.+++.+++++++.+|
T Consensus 416 ~~~~i~~~~~~i~~i~~~~~lpET~g~~l~e 446 (451)
T PF00083_consen 416 GVFLIFAGVCLIAIIFVYFFLPETKGKTLEE 446 (451)
T ss_pred ccchhhHHHHHHHHhheeEEEeeCCCCCHHH
Confidence 4577777777888888888888888777643
No 97
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.76 E-value=2.7e-16 Score=156.98 Aligned_cols=123 Identities=14% Similarity=0.130 Sum_probs=108.9
Q ss_pred HhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccc
Q 007604 60 LTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDC 139 (596)
Q Consensus 60 l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (596)
..++.+.+..-.|.+-+.|.+.+.+.++..|.++||+ |||.++++|.+..++...+.+.+.
T Consensus 59 ~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~------------------ 119 (451)
T KOG2615|consen 59 IGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR------------------ 119 (451)
T ss_pred hCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH------------------
Confidence 3344555667889999999999999999999999999 999999999999999888888875
Q ss_pred cccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccc
Q 007604 140 RKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQD 214 (596)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~ 214 (596)
+...+.++|++.|+.-|-. ..+.++++|.+++++ |+.+++....+..+|.++||+++|++..
T Consensus 120 ------~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 120 ------NFAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ------HHHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 6767777899999998764 667899999999987 9999999999999999999999999987
No 98
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.75 E-value=1.7e-15 Score=164.51 Aligned_cols=149 Identities=16% Similarity=0.216 Sum_probs=118.9
Q ss_pred HHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 007604 54 SNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCND 133 (596)
Q Consensus 54 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 133 (596)
.....++..++|-+ ....|+.+...++..+..++.|.++|.+ |||..++.+.++..+|.++++.+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 34456888889865 6677888999999999999999999998 999999999999999999999875
Q ss_pred CCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcc
Q 007604 134 INSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQ 213 (596)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~ 213 (596)
+...+.++..+.|+|.|... .....++|..|.+. |..+..+.....-+....++.++..+.
T Consensus 130 ------------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 130 ------------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred ------------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 78889999999999977665 45566899999875 776666555544444445666666666
Q ss_pred ccccchhhhHHHHHHHHHHHHH
Q 007604 214 DDVGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 214 ~~~g~~~~f~~~~~~~~~~~~~ 235 (596)
...+|||.|++.++...++++.
T Consensus 191 ~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 191 AHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred cCCCcchHHHHHHHHHHHHHHH
Confidence 5678999999998765555544
No 99
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.75 E-value=4.2e-15 Score=157.09 Aligned_cols=378 Identities=12% Similarity=0.136 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhh
Q 007604 43 VFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVS 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~ 122 (596)
++..+.+-...++++.|++ +.|+|..|.|.+.+...+..++.+++.|+++||...+||.+.+..++.++...+.....
T Consensus 12 f~~f~~~G~~~p~~~~~L~-~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~- 89 (400)
T PF03825_consen 12 FLYFFAYGAFLPYLPLYLE-SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS- 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3333333345588899998 56899999999999999999999999999999984577887777666666554444432
Q ss_pred ccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHH
Q 007604 123 LSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGT 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 202 (596)
+.+.+++..++..+......|...++..+...++ +.-++....-.++|.
T Consensus 90 -----------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~--------~~~YG~iRlwGSiGf 138 (400)
T PF03825_consen 90 -----------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDR--------GKDYGRIRLWGSIGF 138 (400)
T ss_pred -----------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccc--------cCCCCcchhhhhHHH
Confidence 4555556666677777777777777777776632 222333333334444
Q ss_pred HHhhhh-hhhccccc---cchhhhHHHHHHHHHHHHHHHhcCCceec-cCCCCChhHHHHHHHHHHHHhcCCCCCCCchh
Q 007604 203 LLGNTV-LVYIQDDV---GWALGYGLPALGLAIAIAIFLAGTPFYRH-KKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQE 277 (596)
Q Consensus 203 ~l~~~~-~~~l~~~~---g~~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (596)
+++... .+.+.... +....+++.+...++.....+. .|+.+. ++++++..+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~-lp~~~~~~~~~~~~~~~~~-------------------- 197 (400)
T PF03825_consen 139 IVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALF-LPKTPPKRSAKESVKKLLG-------------------- 197 (400)
T ss_pred HHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHh-CCCCccccccCCCcccccc--------------------
Confidence 444222 12222111 2234455554433222221222 222221 111100000000
Q ss_pred hhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeee
Q 007604 278 LYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQ 357 (596)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (596)
.|.. +-.++++.+.-.+..++........+.....++...
T Consensus 198 -------------------------~~~~---------------~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~ 237 (400)
T PF03825_consen 198 -------------------------LDAL---------------KLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQEL 237 (400)
T ss_pred -------------------------hHHH---------------HHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0000 000111111111111122222222222111121111
Q ss_pred eccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhh
Q 007604 358 GTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRL 437 (596)
Q Consensus 358 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~ 437 (596)
. ... ....+...++..+.-+..- ...+++.+| .+..+.+.++.+..++=...++....
T Consensus 238 g-g~~-------~~~~g~~~~l~~~aEi~~f----~~~~~~~~r-------~g~~~ll~~a~~~~~vR~~l~a~~~~--- 295 (400)
T PF03825_consen 238 G-GYS-------GSTIGILWALGVVAEIPFF----FFSGRFLKR-------FGIKWLLLLALVAYAVRWLLYAYFSD--- 295 (400)
T ss_pred c-cch-------hhHHHHHHHHHHHHHHHHH----HHHHHHHHh-------cCHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 1 000 0001111222222222222 233444555 45667788888887777777665421
Q ss_pred hhhhccCccccCCcceehh--HHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHH-HHhHHHHHHhHHHhh
Q 007604 438 SVAKDHGIVEKGQQVPLTI--FIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMT-TLGVGNFLSSFLLST 514 (596)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~--~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~-~~~ig~~lg~~~~~~ 514 (596)
+... ...+...++.|+..+....+...|+.+.+|++.|++++|+++. ..++|..+|..+.|.
T Consensus 296 ---------------~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 296 ---------------PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred ---------------CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 1111 1122234578999999999999999999999999999999886 578999999999999
Q ss_pred hhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007604 515 VSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKF 561 (596)
Q Consensus 515 i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~ 561 (596)
+.+..+..+. ..+..++.+.+++.++..++++++.|+
T Consensus 361 l~~~~g~~~~----------~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 361 LYDAFGARGM----------FDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHhcchhh----------hhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9875431111 112345666666777777777776554
No 100
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.74 E-value=1.6e-16 Score=159.51 Aligned_cols=149 Identities=17% Similarity=0.134 Sum_probs=136.2
Q ss_pred hcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccccc
Q 007604 63 KLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKA 142 (596)
Q Consensus 63 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (596)
.++-++++.|++...+.+.+.+..++.|.+.||+ |+|-.+++|++++...+++.++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 4667889999999999999999999999999998 999999999999999999999875
Q ss_pred ccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhh
Q 007604 143 STLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGY 222 (596)
Q Consensus 143 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f 222 (596)
++++++++|.++|+|.++...+..++++|.||+++ +|++++|+.-.++.+|..+||..+|.+.+..|++.+|
T Consensus 158 ---sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPF 229 (464)
T KOG3764|consen 158 ---SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPF 229 (464)
T ss_pred ---hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcH
Confidence 78899999999999999999999999999999997 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 007604 223 GLPALGLAIAIAIFLAGTP 241 (596)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~ 241 (596)
.+.++..++-..+-++..+
T Consensus 230 lVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 230 LVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHHHHHHHHHHHHHheeC
Confidence 9988877666655554443
No 101
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.74 E-value=1.6e-15 Score=158.62 Aligned_cols=156 Identities=9% Similarity=-0.007 Sum_probs=136.0
Q ss_pred HHHHHHHHHhhhcCCChhh-hhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 007604 52 ISSNLVMYLTDKLHHGTVK-SANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPP 130 (596)
Q Consensus 52 ~~~~l~~yl~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 130 (596)
..+++..|+.+++|++.+| .|.+.+++..++.++.+++|+++||+ |.|+++.++.+...+..++.+++.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~--------- 113 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGT--------- 113 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 4566777999999999999 99999999999999999999999998 999999999999999999998875
Q ss_pred CCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhh
Q 007604 131 CNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLV 210 (596)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~ 210 (596)
+...+.+.|++.|++.|... +...++..++|+++ |+++.++...+.++|.++++++++
T Consensus 114 ---------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 114 ---------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQ 171 (511)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999 99999999999986 999999999999999999999999
Q ss_pred hccccccchhhhHH---HHHHHHHHHHHHHhcC
Q 007604 211 YIQDDVGWALGYGL---PALGLAIAIAIFLAGT 240 (596)
Q Consensus 211 ~l~~~~g~~~~f~~---~~~~~~~~~~~~~~~~ 240 (596)
+ ...+||+.-+.+ +.....+++++.++++
T Consensus 172 l-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 172 L-LVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred H-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8 446788865544 4444555555544443
No 102
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.73 E-value=3.6e-16 Score=174.91 Aligned_cols=203 Identities=15% Similarity=0.160 Sum_probs=149.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
++.+...+....+......++.......++++++++..+.|++.+.+.+++.++.++.|+++||+ ||||.+.++.++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHH
Confidence 34343444434455555566777777788999999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHhhccC-C---------------CCCCCCCCCCc---------cccccc--cchhHHHHHHHHHHHHhccCc
Q 007604 112 MGMIVLALSVSLSG-L---------------KPPPCNDINSQ---------DCRKAS--TLQLGTFFAALYTLAVGTGGT 164 (596)
Q Consensus 112 i~~~~~~~~~~~~~-~---------------~~~~~~~~~~~---------~~~~~~--~~~~~~~~~~~~l~g~g~g~~ 164 (596)
+|.++.++...+.. + ...-|..-..+ .|.... ......++++|+++|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 99999887642210 0 01112100000 111111 113567789999999999999
Q ss_pred ccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccc----------------------cchhhh
Q 007604 165 KPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDV----------------------GWALGY 222 (596)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~----------------------g~~~~f 222 (596)
.+...+++.|.+|+++ |+.+.++++.+..+|.++|+++++++.+.+ +|+..|
T Consensus 190 ~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~F 263 (633)
T TIGR00805 190 FPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGF 263 (633)
T ss_pred hhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHH
Confidence 9999999999999987 999999999999999999999998876432 277778
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 007604 223 GLPALGLAIAIAIFLAGTP 241 (596)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~ 241 (596)
++.+++.++..+.++...+
T Consensus 264 li~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 264 LICGGVALLTSIPFFFFPK 282 (633)
T ss_pred HHHHHHHHHHHHHHHhCcc
Confidence 7777655554444444443
No 103
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.73 E-value=5.9e-16 Score=167.70 Aligned_cols=420 Identities=13% Similarity=0.102 Sum_probs=257.8
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGIS---SNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~---~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
-|.+++..|..++..+++. ..+-..+.++++.+..+++|+.++......+..|+.+.+.||+ |.|.+.+++.++..
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHH
Confidence 4556666666666666654 3344567789999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHH-HHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAA-LYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
+|.++.++++ +.+.+++. -++.|+|.|+........++.+|+++ |+.+
T Consensus 123 ~g~~lssF~~------------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R~lA 171 (509)
T KOG2504|consen 123 LGLLLSSFAT------------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------RALA 171 (509)
T ss_pred HHHHHHHHHh------------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------HHHH
Confidence 9999999986 56666654 45689999999999999999888865 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHH---HHHHHHHhc
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAK---VIVAAIRKR 267 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 267 (596)
.++-..+..+|..+-|.+..++.+.+|||..+++-+.+.+-........+|...+.++.+. ++... .....-+..
T Consensus 172 ~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 249 (509)
T KOG2504|consen 172 TGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEE--KDLRNSAASVESTPKPV 249 (509)
T ss_pred HhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhh--hhhcccccccccccccc
Confidence 9988888888888888888999999999999988776655444444555553333222200 00000 000000000
Q ss_pred CCCCCCCchhhh---hhhhHHhhhcCcccccCCcchh---hhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhh
Q 007604 268 NVPLPIDPQELY---ELDLEYYAQRGKYRIGSTQNLR---FFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATF 341 (596)
Q Consensus 268 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~ 341 (596)
+...++...... ..++. +.++...+.......+ .+|. .-.+++..++..+...+..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~----------------~ll~~~~fl~~~~~~~~~~~ 312 (509)
T KOG2504|consen 250 ELRISERDSGLKKLSLSNLA-TLKRGPDKWRNSPLQAFLSMLDL----------------SLLKDPKFLLLALSNLFAYL 312 (509)
T ss_pred ccccccCCCCCCcccccchh-hhhhCCccccccchhhhhhhhhH----------------HHHcCchHHHHHHHHHHHHH
Confidence 000000000000 00000 0000000000000000 0000 01112111222222222233
Q ss_pred hhhhhhhcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHH
Q 007604 342 VPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVI 421 (596)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l 421 (596)
.+.......+.+.... ..+ ....+...++..+..+++.++.+++.|+-.. +......++++.
T Consensus 313 g~~~p~~~l~~~~~~~--g~~-------~~~aa~l~Siigi~~i~gRi~~G~laD~~~~---------~~~~~~~~~ll~ 374 (509)
T KOG2504|consen 313 GFNVPFVYLPSYAKSL--GLS-------SNDAAFLLSIIGVSDIIGRIILGLLADKPGI---------RALVLFLLTLLI 374 (509)
T ss_pred HHHHHHHHHHHHHhhc--CCC-------hhhhHHHHHHHHHhhhhhhhhhhhhcCcccc---------chHHHHHHHHHH
Confidence 2222222222221111 111 1123344455566666777777775544432 233445666666
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHH
Q 007604 422 HIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTL 501 (596)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 501 (596)
.+++.++..+. .+.+.++...+++|+..+.........+.+..+.+.-..+.|+....+
T Consensus 375 ~gl~~~~~p~~---------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~ 433 (509)
T KOG2504|consen 375 AGLARLFLPFA---------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQ 433 (509)
T ss_pred HHHHHHHHHHh---------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHh
Confidence 76666555443 355677778899999999888888889999999999999999999999
Q ss_pred hHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHh
Q 007604 502 GVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVA 559 (596)
Q Consensus 502 ~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~ 559 (596)
+++..+|+.+.+.+.+.++ .|...|+..++..+++...+++..
T Consensus 434 gi~~l~gpPiag~~~d~tg---------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 434 GIGALVGPPIAGLLYDITG---------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHcCcccceeeeeccC---------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999998876552 244456666666666655544443
No 104
>PRK11462 putative transporter; Provisional
Probab=99.73 E-value=1.1e-14 Score=157.66 Aligned_cols=171 Identities=8% Similarity=0.060 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh---cchhHHHH-HHHHHHHHHHH
Q 007604 40 VYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY---LGRYWTFV-IAFFFYLMGMI 115 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~~~~-~~~~~~~i~~~ 115 (596)
+..+..++.+..+..++..|.++.+|+++..+|.+..+.-+...+.-|+.|+++||. +||||..+ ++.+..+++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 445555666666778899999999999999999999999999999999999999973 48876655 45566666665
Q ss_pred HHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHH
Q 007604 116 VLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWM 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (596)
++...+ ... .......+.+..++..++..+......++.+|..++.+ +|.+..++..
T Consensus 96 llf~~p---~~s---------------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~ 152 (460)
T PRK11462 96 LAYSTP---DLS---------------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRF 152 (460)
T ss_pred HHHhCC---CCC---------------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHH
Confidence 554322 110 01123334455556778888888888999999999765 5999999999
Q ss_pred HHHHHHHHHhhhhhhhcccc-------ccchhhhHHHHHHHHHHH
Q 007604 196 FSIFFGTLLGNTVLVYIQDD-------VGWALGYGLPALGLAIAI 233 (596)
Q Consensus 196 ~~~~ig~~l~~~~~~~l~~~-------~g~~~~f~~~~~~~~~~~ 233 (596)
.+.++|..+++.+...+... .||+....+.++..++..
T Consensus 153 ~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 153 VLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 99999888776664433221 356665555544433333
No 105
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.73 E-value=1.3e-15 Score=158.56 Aligned_cols=390 Identities=8% Similarity=0.019 Sum_probs=217.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH-
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL- 111 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~- 111 (596)
++.+......++..+++-...++++.+++++.|++.+++|.+.++..+...+.+|+.|.++||. |.||-+++...+..
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence 4566666666665566555679999999999999999999999999999999999999999998 96666554433222
Q ss_pred -HHHHHH-HHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhh
Q 007604 112 -MGMIVL-ALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLS 189 (596)
Q Consensus 112 -i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (596)
.+-... ...+.+. .| ++++.++.++..+....+..+.. |.+-++. .++.+-
T Consensus 86 l~~pff~~v~~pll~--------------------~n---~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~---sr~~~f 138 (412)
T PF01306_consen 86 LFGPFFIYVFGPLLQ--------------------SN---FWLGAIIGGIYLGLVFNAGVPLS-EAYAERV---SRRNGF 138 (412)
T ss_dssp TCHHHHHHTHHHHHH--------------------TT----HHHHHHTTTTTTTTTTTHHHHH-HHHHHHH---HHHHSS
T ss_pred HHHHHHHHHHHHHHH--------------------HH---HHHHHHHHHHHHHHHHcccchHH-HHHHHHH---HHHhcC
Confidence 222221 1211000 01 22333333343333333332222 3222221 112233
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCC
Q 007604 190 FFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNV 269 (596)
Q Consensus 190 ~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (596)
=+|-......+|.+++..++|++.+ .+.+..||++....++..++.+..++..+++.+..+...
T Consensus 139 eYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~--------------- 202 (412)
T PF01306_consen 139 EYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALG--------------- 202 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSS---------------
T ss_pred CcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccc---------------
Confidence 3444555668888889889998876 456778887765544444444444433222111100000
Q ss_pred CCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHh-hhhhhhhh
Q 007604 270 PLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVAT-FVPSTMLA 348 (596)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~-~~~~~~~~ 348 (596)
.+++....-|. .++.+.|++.....+.... ..+....+
T Consensus 203 -------------------------~~~~~~~~~~~----------------~~l~k~~~fw~~~l~v~g~~~~Y~vfdq 241 (412)
T PF01306_consen 203 -------------------------AKKDKVSLKDV----------------LSLFKMRNFWFFVLFVIGVAAIYDVFDQ 241 (412)
T ss_dssp -------------------------S------HHHH----------------HHHTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------cCCCCCcHHHH----------------HHHhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000 0111123333333333333 34444445
Q ss_pred cccceeeeeeccccccCCCcccccccccc---cchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHH
Q 007604 349 QINTLFVKQGTTLDRAIGSSFKIPPASLT---GFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIII 425 (596)
Q Consensus 349 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~ 425 (596)
|.+.++..+... . +..+..+. ++..+.-++...+..++..|++ +.+.+.++..++.+=
T Consensus 242 qf~~y~~~~f~~--~------~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig-----------~k~~Lllag~i~~iR 302 (412)
T PF01306_consen 242 QFPIYFASFFQS--A------GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG-----------AKNLLLLAGVIMAIR 302 (412)
T ss_dssp HHHHHHHHTSSS--H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc--c------ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC-----------hHhHHHHHHHHHHHH
Confidence 544444332111 1 11122222 2223333333334444444444 445577777777777
Q ss_pred HHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHH-HHHHhHH
Q 007604 426 MVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYS-MTTLGVG 504 (596)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~-~~~~~ig 504 (596)
.+..++. .+++++++.-.+.++-..+...+..-|+.+.+|++..++...+. ++..++|
T Consensus 303 i~~~~~~---------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~ 361 (412)
T PF01306_consen 303 IIGSGFA---------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIG 361 (412)
T ss_dssp HHHHHT-----------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHH
T ss_pred HHHHhhh---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHH
Confidence 6666664 36677777889999999999999999999999999999999985 6889999
Q ss_pred HHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccc
Q 007604 505 NFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYV 563 (596)
Q Consensus 505 ~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 563 (596)
..+.+.+.|.+++.. +++..|++++++.+...++..+..++.+
T Consensus 362 ~~i~s~~~G~lyd~~----------------G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 362 IIILSPLAGYLYDRI----------------GFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHhhhHHhhHhhc----------------CcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 999999999998743 3456788888887777777666655433
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.73 E-value=5.4e-15 Score=160.34 Aligned_cols=380 Identities=12% Similarity=0.071 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcc-----hhHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLG-----RYWTFVIAFFF 109 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-----rk~~~~~~~~~ 109 (596)
+..+....+...+. +.+...++.++++++|+++++.+...+...+...+-++ +|.++||+ + ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHH
Confidence 34445456677777 76777888889999999999999999988888877666 99999998 7 77777777655
Q ss_pred HH-HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhh
Q 007604 110 YL-MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKL 188 (596)
Q Consensus 110 ~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (596)
.. ++...++... .......+.+++.+++.+...++..++..|..+ +++ ..++
T Consensus 105 ~~~~~~~~l~~~~-----------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~ 157 (468)
T TIGR00788 105 GSAILYGLLPGKV-----------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGP 157 (468)
T ss_pred HHHHHHHhccccc-----------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCC
Confidence 42 2222221111 123333346788999999999999999999999 431 1234
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcC
Q 007604 189 SFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRN 268 (596)
Q Consensus 189 ~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (596)
...++.+...++|.++|+.++|++.+..+|+..|++.++..++..+..++.+++.....++.+.......
T Consensus 158 ~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~---------- 227 (468)
T TIGR00788 158 SLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNM---------- 227 (468)
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhh----------
Confidence 4556666677899999999999999989999999988876665544333333321001111000000000
Q ss_pred CCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhh-hhhhh
Q 007604 269 VPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFV-PSTML 347 (596)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~-~~~~~ 347 (596)
. .......... .+. ..+. + ...+.+.+...+. +.++ +....
T Consensus 228 ~--~~~~~~~~~~---------------~~~--~~~l----------~------~~l~~~~i~~~l~---fifl~~~~~~ 269 (468)
T TIGR00788 228 A--LLTLGVLANV---------------KVQ--ILGL----------R------GAIQLLEIAKPLI---FIFLSYANLP 269 (468)
T ss_pred h--hhhhhHHHHH---------------HHH--HHHH----------H------HHHhcHHHHHHHH---HHHHHHhhcC
Confidence 0 0000000000 000 0000 0 0000111111111 1111 11111
Q ss_pred hcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHH
Q 007604 348 AQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMV 427 (596)
Q Consensus 348 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~ 427 (596)
......+..+.. .+| ......+.......++.+++..+.++ +.+| .+..+.+.++.++.+++.+
T Consensus 270 ~~~~~~f~~~~~----~lG-~s~~~~G~~~~~~~v~~i~g~~~~~~----~~~~-------~~~r~~l~~~~~l~~~~~~ 333 (468)
T TIGR00788 270 GASGSVFCATTQ----CLP-GGPSFSGMSKVVGNLGSLCGVGGYDR----FLKT-------FPYRLLFGVTTLLYTLSSL 333 (468)
T ss_pred CCCceeEEEEcc----cCC-CCcchhhhHHHHHHHHHHHHHHHHHH----HHhh-------CCHHHHHHHHHHHHHHHHh
Confidence 111122221111 121 00112233344445555555555555 4444 3444666777776666553
Q ss_pred HHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHH
Q 007604 428 IASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFL 507 (596)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~l 507 (596)
...+... +.+. ..+ ..+.++.+...++.+++.++...+...++.+.+|++.+|+..|+.+....+|..+
T Consensus 334 ~~~~l~~-~~~~--~~g--------i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v 402 (468)
T TIGR00788 334 FDLILVK-RWNL--AFG--------ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSV 402 (468)
T ss_pred Cceeeee-cccc--ccC--------CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHH
Confidence 3221100 0000 000 0112234445678888888888889999999999999999999999999999999
Q ss_pred HhHHHhhhhccc
Q 007604 508 SSFLLSTVSDIT 519 (596)
Q Consensus 508 g~~~~~~i~~~~ 519 (596)
++.+.+.+.+..
T Consensus 403 ~~~~gg~l~~~~ 414 (468)
T TIGR00788 403 SGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHHHc
Confidence 999888887644
No 107
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.72 E-value=2.2e-14 Score=152.20 Aligned_cols=178 Identities=12% Similarity=-0.045 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhH--HHHHHHHHHHhhhhh-HHHhhhhcchhHHHHHHHHHH-
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANN--VTNWGGTIWVTPIFG-AGVAEAYLGRYWTFVIAFFFY- 110 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~--~~~~~~~~~~~~~~~-G~laD~~~Grk~~~~~~~~~~- 110 (596)
...+....+.+.+.+..+.+.+|.|++ +.|.+.++.|.. .........+.+++. ++.+||+ ||||..++.+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 344555566666666667788888887 569999999997 355567776666666 6689997 9999976665332
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
......++... + .......++....+.++..+...+...++..|..++++ ++..
T Consensus 81 ~~~~~~~~~~~--~------------------~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~ 134 (390)
T TIGR02718 81 SACLASLALVG--P------------------DVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKG 134 (390)
T ss_pred HHHHHHHHcCC--c------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHH
Confidence 21222222110 0 00012223333444555666666666777777776664 6777
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcC
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGT 240 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 240 (596)
.+....+..+|..+|+...+++.+..|||.+|++.++..++..+..+..+
T Consensus 135 ~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 135 NAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 77777788899999998888999889999999988876655554444433
No 108
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.71 E-value=2.7e-15 Score=151.90 Aligned_cols=151 Identities=14% Similarity=0.070 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMI 115 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 115 (596)
+.++..-|+...........+...+++.++++..|++.+..++..++.+++++.|++.+|+ |+|+.++.++.++++|..
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 3334444444444455667788889999999999999999999999999999999999998 999999999999999998
Q ss_pred HHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHH
Q 007604 116 VLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWM 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (596)
+..-+++. .++..+..+.++.+.|.+...+++.++++...|+++ -..-.++.+
T Consensus 94 lF~pAa~~---------------------~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q 146 (422)
T COG0738 94 LFWPAASS---------------------KSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQ 146 (422)
T ss_pred HHhhhhhh---------------------hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHH
Confidence 88644321 267788889999999999999999999999999975 455567778
Q ss_pred HHHHHHHHHhhhhhhhccc
Q 007604 196 FSIFFGTLLGNTVLVYIQD 214 (596)
Q Consensus 196 ~~~~ig~~l~~~~~~~l~~ 214 (596)
....+|+++||.+++++..
T Consensus 147 ~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 147 AFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HhhhhHHHHHHHHHHHHHH
Confidence 8889999999999988765
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.70 E-value=1.5e-15 Score=163.33 Aligned_cols=356 Identities=12% Similarity=0.103 Sum_probs=225.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhh----hhcchhHHHH-HHHHHHHHHHHHH
Q 007604 43 VFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAE----AYLGRYWTFV-IAFFFYLMGMIVL 117 (596)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~Grk~~~~-~~~~~~~i~~~~~ 117 (596)
+...+.......+++.|+++.+|+++...+.+..+..+...+..|+.|.++| |+ ||||-.+ ++....+++..++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 4444455556678899999999999999999999999999999999999999 77 8776555 5667777777666
Q ss_pred HHHhhcc-CCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHH
Q 007604 118 ALSVSLS-GLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMF 196 (596)
Q Consensus 118 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (596)
.... | .+ ........+.+..++..++.........++.+|..++++ +|.+..++...
T Consensus 90 f~~~--p~~~---------------~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~ 147 (428)
T PF13347_consen 90 FSPP--PAGL---------------SFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMI 147 (428)
T ss_pred hccc--cchh---------------hhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHH
Confidence 5431 0 00 001123334566667788989999999999999999765 49999999888
Q ss_pred HHHHHHHHhhhhhhhcccc-------ccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCC
Q 007604 197 SIFFGTLLGNTVLVYIQDD-------VGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNV 269 (596)
Q Consensus 197 ~~~ig~~l~~~~~~~l~~~-------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (596)
...+|..+...+.+.+.+. .+|++..++.++..++..++.....|+...+.+++++..
T Consensus 148 ~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~--------------- 212 (428)
T PF13347_consen 148 FSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKI--------------- 212 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccccc---------------
Confidence 8888887555555544321 158877777766555554444443333111111000000
Q ss_pred CCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhc
Q 007604 270 PLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQ 349 (596)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~ 349 (596)
+..+. ++ ...+.|.+...+...+.....+.....
T Consensus 213 -------------------------~~~~~----------------~~-----~~~~nr~~~~l~~~~~~~~~~~~~~~~ 246 (428)
T PF13347_consen 213 -------------------------SLRDS----------------LR-----SLFRNRPFRILLLAFFLQWLAFALMNT 246 (428)
T ss_pred -------------------------ccccc----------------hh-----hhcccchHHHHHHHHHHHHhhhhhhhh
Confidence 00000 00 001112222222221111111111111
Q ss_pred ccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHH
Q 007604 350 INTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIA 429 (596)
Q Consensus 350 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~ 429 (596)
...++.... ++. +...+.+.....+..++..|+..++.+|+++| +.+..+.++.+++.++.
T Consensus 247 ~~~y~~~~v------l~~--~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----------~~~~~~~~~~~~~~~~~ 307 (428)
T PF13347_consen 247 FLPYYFTYV------LGN--EGLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----------KVYIIGLLLAALGFLLL 307 (428)
T ss_pred HHHHHHHHH------hcC--chhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----------eehhhhHHHHHHHHHHH
Confidence 111221111 110 11122334456677778888888877777666 33677777787777776
Q ss_pred HHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhcc-------chhHHHHHHHHHHHHh
Q 007604 430 SFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAP-------ESMKSLGTSYSMTTLG 502 (596)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~~ 502 (596)
.+.. ..+.+++++..++.|++.+...+..+++..|..+ ++..|...|++++..-
T Consensus 308 ~~~~-------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k 368 (428)
T PF13347_consen 308 FFLG-------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIK 368 (428)
T ss_pred HHHH-------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhH
Confidence 6553 1366778888899999999999999999998886 3446999999999999
Q ss_pred HHHHHHhHHHhhhhcccc
Q 007604 503 VGNFLSSFLLSTVSDITK 520 (596)
Q Consensus 503 ig~~lg~~~~~~i~~~~~ 520 (596)
++..+++.+.+.+....+
T Consensus 369 ~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 369 IGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999998876543
No 110
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.70 E-value=5.6e-17 Score=165.51 Aligned_cols=434 Identities=14% Similarity=0.071 Sum_probs=229.7
Q ss_pred CCchHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhc-------CCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcch
Q 007604 30 GGWRACSFVVVYEVF---ERMAYHGISSNLVMYLTDKL-------HHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGR 99 (596)
Q Consensus 30 ~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~yl~~~l-------g~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr 99 (596)
..|+.+-.+.+.-+. .....+.+....+.+-.... +.++.-.+.+..+..++.++|+++.||++|++ ||
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GR 113 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GR 113 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc
Confidence 356655544443332 24444444444444322222 24566777888899999999999999999998 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccccccc-chhHHHHHHHHHHHHhccCcccchhhhhhccCCC
Q 007604 100 YWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKAST-LQLGTFFAALYTLAVGTGGTKPNILTIAADQFDE 178 (596)
Q Consensus 100 k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 178 (596)
|+++...+++..+++++++++... +.+ .-+..+...|+++|+|.|+-.|...+..+|..-+
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~------------------~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~ 175 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGT------------------TSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANK 175 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCC------------------CCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhh
Confidence 999999999999999976655311 111 2566788899999999999999999999998877
Q ss_pred CChhhhhhhhhhHHHHHHHHHH----HHHHhhhhhhhccc-----------cccchhhhHHHHHHHHHHHHHHHhcCCce
Q 007604 179 FEPKEKAHKLSFFNWWMFSIFF----GTLLGNTVLVYIQD-----------DVGWALGYGLPALGLAIAIAIFLAGTPFY 243 (596)
Q Consensus 179 ~~~~~~~~r~~~~~~~~~~~~i----g~~l~~~~~~~l~~-----------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 243 (596)
+. ||...+........ |++++-++.+-.-. ..-||..|.+.++..++.+..-+.+++.-
T Consensus 176 ~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~ 249 (538)
T KOG0252|consen 176 KT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETA 249 (538)
T ss_pred cc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch
Confidence 64 88777654444444 44444433332211 12399998887765554443322222211
Q ss_pred eccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchh
Q 007604 244 RHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQ 323 (596)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (596)
+++.-.. +-...+..+... +.+. ..++.+.+ .....+.++.++ .| ....
T Consensus 250 ~Y~al~~-------~~~~~a~~d~~k--~~~~----~~~~~~~~--~~~~~~~~~~~~-------------~F---~~~f 298 (538)
T KOG0252|consen 250 RYTALVS-------KKLKQAAGDMKK--VLSV----DIEAESTA--ESDVPPPSNSFG-------------LF---SRLF 298 (538)
T ss_pred hHHHHhh-------cCHhhhhhcccc--cccc----ccchhhcc--ccCCCCcccccc-------------hH---HHHH
Confidence 1110000 000111111000 0000 00000000 000000000000 00 0000
Q ss_pred hh-hhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCCCccccccc----------ccccchhHHHHH-HHHHH
Q 007604 324 VE-ETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPA----------SLTGFVTLSMLV-CVVLY 391 (596)
Q Consensus 324 v~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~i-~~~l~ 391 (596)
.+ .-+.++. ....++.+-...+++-+.|..-.+ ++| -.+.. ..+.+.++...+ +.++.
T Consensus 299 ~~~hg~~Llg------t~~~WFllDiafy~~nL~~s~I~~-~ig---~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~t 368 (538)
T KOG0252|consen 299 LRWHGKHLLG------TAGTWFLLDIAFYGQNLFQSVIFS-AIG---VIPSANTYHELFKVAEGNLIIAVCSTVPGYWFT 368 (538)
T ss_pred HHHHHHHHHH------HHHHHHhhhhhhhccccHHHHHHH-hhc---cCCCcchHHHHHHHHHHHHHHHHHccCCceeEE
Confidence 00 0111111 111122222222222222211101 111 01111 111111111111 22445
Q ss_pred hHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHH-HHHHHHHH
Q 007604 392 DRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQ-FVLMGTAD 470 (596)
Q Consensus 392 ~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~-~~l~g~~~ 470 (596)
..++|+++|| ..-..|++++.+.+++++....+. .+...+++. .+.+.++.
T Consensus 369 v~~id~iGRk-----------~iq~~GF~~~~i~~~~~~~~y~~~-----------------~~~~Gf~v~y~l~~ff~N 420 (538)
T KOG0252|consen 369 VYFIDIIGRK-----------YIQLMGFFIMTIFFFVIAGPYNQL-----------------ENTIGFVVLYSLTFFFGN 420 (538)
T ss_pred EEEeehhhhH-----------HHHHhhHHHHHHHHHHHcCCcccc-----------------cccCceeehHHHHHHHHh
Confidence 5566777777 336668888887777766542110 011112222 23334445
Q ss_pred HHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHH
Q 007604 471 AFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVL 550 (596)
Q Consensus 471 ~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v 550 (596)
-.-+.+...+.+|.+|.+.||+.-|+.-.++=.|+++|........+.. .+.+ .++.+.++++++.+.+
T Consensus 421 FGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~--------yp~~---~g~~~v~~i~~~~~~~ 489 (538)
T KOG0252|consen 421 FGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN--------YPPN---IGVRNVFIILAGCMLL 489 (538)
T ss_pred cCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc--------CCcc---ccchHHHHHHHHHHHH
Confidence 5555666777889999999999999999999999999999877765411 1112 3456789999999888
Q ss_pred HHHHHHHHhhccccccCCC
Q 007604 551 NFVFFLVVAKFYVYKAEVS 569 (596)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~ 569 (596)
+.++.+++ +++++|..++
T Consensus 490 gi~~T~l~-pEtk~~~lee 507 (538)
T KOG0252|consen 490 GILFTLLI-PETKGKSLEE 507 (538)
T ss_pred hHheeEEe-ecccccCHHH
Confidence 87776665 4777776654
No 111
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.68 E-value=1.4e-14 Score=155.65 Aligned_cols=150 Identities=11% Similarity=0.090 Sum_probs=122.8
Q ss_pred hhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccc
Q 007604 61 TDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCR 140 (596)
Q Consensus 61 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (596)
.++++....+.+.+.+++.++++++.+++|.+.||+ .-.+.+....++..+-.++.....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~------------------- 132 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH------------------- 132 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 367888999999999999999999999999999998 866666665555544444443332
Q ss_pred ccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhc------cc
Q 007604 141 KASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYI------QD 214 (596)
Q Consensus 141 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l------~~ 214 (596)
+.+.+++.|++.|+..++..|....+++.++.+++ |+.-+++++....+|.++|.++...+ ..
T Consensus 133 -----s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 133 -----SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred -----hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 78899999999999999999999999999999997 99999999999999999999887765 23
Q ss_pred cccchhhhHHHHHHHHHHHHHHHhcCC
Q 007604 215 DVGWALGYGLPALGLAIAIAIFLAGTP 241 (596)
Q Consensus 215 ~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (596)
..||||.|++.+++.+...++.++..|
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEec
Confidence 478999999999765544444444333
No 112
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.68 E-value=7.4e-14 Score=139.51 Aligned_cols=327 Identities=13% Similarity=0.121 Sum_probs=230.2
Q ss_pred HHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 007604 54 SNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCND 133 (596)
Q Consensus 54 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 133 (596)
..+..-+++++|++.+.+|.+.+...++..+..+++.+++.|+ |..+.+..++++.++|.++=...
T Consensus 32 gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~------------- 97 (395)
T COG2807 32 GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLG------------- 97 (395)
T ss_pred hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc-------------
Confidence 3344567889999999999999999999999999999999998 99999999999999988776543
Q ss_pred CCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcc
Q 007604 134 INSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQ 213 (596)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~ 213 (596)
+...++.+-.+.|.|.+......+.++-+.||++ -+..++.|....++|+++++.+...+.
T Consensus 98 ------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~~aaLaa~lavpla 158 (395)
T COG2807 98 ------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGAGAALAAALAVPLA 158 (395)
T ss_pred ------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHHHHHHHhhhhhHHH
Confidence 5667889999999999999999999999999987 689999999999999999998888887
Q ss_pred ccc-cchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCcc
Q 007604 214 DDV-GWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKY 292 (596)
Q Consensus 214 ~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (596)
++. |||..+.+-+...+++++..+....+ ++.+..+.. ...
T Consensus 159 ~~~~gW~~aL~~WAl~allAl~~WlPq~~r--~~~~~~~~~------------------------------------~~~ 200 (395)
T COG2807 159 QHSGGWRGALGFWALLALLALLIWLPQALR--EQAASIATK------------------------------------LVS 200 (395)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHhhhccc--ccccccccc------------------------------------ccc
Confidence 766 79998887777666666544332111 111100000 000
Q ss_pred cccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCCCccccc
Q 007604 293 RIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIP 372 (596)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 372 (596)
+. +.| ++.......+.+-+-...+|....+++.++.++..... .
T Consensus 201 ~~-------------------~vw--------~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~---------~ 244 (395)
T COG2807 201 VR-------------------KVW--------RSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAA---------E 244 (395)
T ss_pred cc-------------------ccc--------cCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHH---------H
Confidence 00 011 11122223334446677888888888888777643211 2
Q ss_pred ccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcc
Q 007604 373 PASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQV 452 (596)
Q Consensus 373 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (596)
.+.+.++..+..+....++..+. +|.. +.........+++.++++...+...
T Consensus 245 aG~llsl~~l~~~~~~ll~P~la----~R~~------n~r~~~~~~~~~~l~G~~G~~~~P~------------------ 296 (395)
T COG2807 245 AGSLLSLMQLAQLPTALLIPLLA----RRSK------NQRPLVVLALLLMLVGLVGLLLAPG------------------ 296 (395)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH----HHhc------ccchHHHHHHHHHHHHHHHHHHhhh------------------
Confidence 23334444445555544444443 3211 2223345555566666666655421
Q ss_pred eehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhcc-chhHHHHHHHHHHHHhHHHHHHhHHHhhhhccc
Q 007604 453 PLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAP-ESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDIT 519 (596)
Q Consensus 453 ~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~ 519 (596)
+..++| .+++|+|.+..+|....++...++ ++..+...|+.+..+.+=..+||.+.+.+.|.+
T Consensus 297 ~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 297 QLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred hHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc
Confidence 122333 488999999999999999988875 566778899999999999999999999998866
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.66 E-value=5.7e-13 Score=140.15 Aligned_cols=363 Identities=12% Similarity=0.111 Sum_probs=228.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh---cchhHHH-HHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY---LGRYWTF-VIAFFFYL 111 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~~~-~~~~~~~~ 111 (596)
..--...+..++.+-.+..++..|.++..|+++..+|.+..+.-+..++.-|+.|.+.||. +||+|-. +++.+.++
T Consensus 15 i~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~ 94 (467)
T COG2211 15 IGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFA 94 (467)
T ss_pred HhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHH
Confidence 3344456666777777889999999999999999999999999999999999999999974 3766554 45556677
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
+...++..+.+... +.+....++-..+.+++.........++.++..++.+ +|.+..
T Consensus 95 i~~~l~F~~p~~~~------------------~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~-----ER~~l~ 151 (467)
T COG2211 95 IVAVLLFITPDFSM------------------TGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ-----ERASLT 151 (467)
T ss_pred HHHHHHHcCCCccc------------------CcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH-----HHHHHH
Confidence 77777665542110 1244555666778899999998899999999999876 599999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcc----c---cccchhhhHHHHHHHHHHHHHHHhc-CCceeccCCCCC-hhHHHHHHHHH
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQ----D---DVGWALGYGLPALGLAIAIAIFLAG-TPFYRHKKPAGS-PFTRMAKVIVA 262 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~----~---~~g~~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ 262 (596)
++-..+.++|..+...+.+.+. + ..||+...++.+++..+.++..+.. +++.....+.++ ...+....+..
T Consensus 152 s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~ 231 (467)
T COG2211 152 SWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLL 231 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHH
Confidence 9999999999776654444332 2 3467766665555444444433332 222221111110 00000000000
Q ss_pred HHHhcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhh
Q 007604 263 AIRKRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFV 342 (596)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~ 342 (596)
..+.|.++..+...++..+
T Consensus 232 -------------------------------------------------------------~~~Nrp~~~~l~~~l~~~~ 250 (467)
T COG2211 232 -------------------------------------------------------------IFKNRPLLLLLLMNLLLFI 250 (467)
T ss_pred -------------------------------------------------------------HHccchHHHHHHHHHHHHH
Confidence 0112333333333332222
Q ss_pred hhhhhhcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHH
Q 007604 343 PSTMLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIH 422 (596)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~ 422 (596)
..-.......++.... +++. +..+...........+++.++..++..++++| +...++.++.
T Consensus 251 ~~~i~~s~~~yy~~y~--lg~~-----~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----------~~~~~~~~~~ 312 (467)
T COG2211 251 AFNIRGSIMVYYVTYV--LGDP-----ELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----------KLFLIGLLLL 312 (467)
T ss_pred HHHHHhhhhheeEEEE--cCCh-----HHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----------HHHHHHHHHH
Confidence 2222222223333321 1211 22222233334444455566667766666655 4577777777
Q ss_pred HHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhcc-------chhHHHHHH
Q 007604 423 IIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAP-------ESMKSLGTS 495 (596)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~g 495 (596)
.++.+...+.. ..+.+..++..++.++|.+..++..+++++|... .+..|...|
T Consensus 313 ~i~~~~~~f~~-------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s 373 (467)
T COG2211 313 AVGYLLLYFTP-------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYS 373 (467)
T ss_pred HHHHHHHHhhc-------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHH
Confidence 77777766642 1345556666688899999999999999887653 455688899
Q ss_pred HHHHHHhHHHHHHhHHHhhhhccc
Q 007604 496 YSMTTLGVGNFLSSFLLSTVSDIT 519 (596)
Q Consensus 496 ~~~~~~~ig~~lg~~~~~~i~~~~ 519 (596)
.+.++.=+|..++..+.++++...
T Consensus 374 ~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 374 GMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999998644
No 114
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.57 E-value=9e-12 Score=134.43 Aligned_cols=399 Identities=14% Similarity=0.093 Sum_probs=214.1
Q ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhcC---C-------------------------C-hhhhhhHHHHHHHHH
Q 007604 33 RACSFVVVYEVFER-MAYHGISSNLVMYLTDKLH---H-------------------------G-TVKSANNVTNWGGTI 82 (596)
Q Consensus 33 ~~~~~~~~~~~~~~-~~~~~~~~~l~~yl~~~lg---~-------------------------~-~~~~~~~~~~~~~~~ 82 (596)
|.++...+..+.+. +..-.+..++|.|+++... . + .+..++..++..+..
T Consensus 4 ~~i~~W~lyd~ans~f~~~i~t~~~p~~~~~~a~~~g~~~~~~~~~c~~~~~~c~~~~~g~~~~~~s~~~~~~sis~l~~ 83 (477)
T PF11700_consen 4 REIWSWALYDWANSPFATVIVTFFFPPYFQSLAREAGVLPGDPTQPCSDSDDDCVVPFFGSWIDTSSLWLYANSISGLLQ 83 (477)
T ss_pred hHHHHHHHhHhhcccchhhhHHHHHHHHHHHHHHhcccccccccCcccccCCccccccccccccHhHHHHHHHHHHHHHH
Confidence 56666677777654 3445566778888876431 1 1 123356778888899
Q ss_pred HHhhhhhHHHhhhhcchhHHHHH-HHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhc
Q 007604 83 WVTPIFGAGVAEAYLGRYWTFVI-AFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGT 161 (596)
Q Consensus 83 ~~~~~~~G~laD~~~Grk~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~ 161 (596)
.+..|+.|.++|+- |+||-++. ..++..+.+.++.+.. + .+.....+..++..++.
T Consensus 84 all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~--~--------------------~~~~~~~~l~iia~v~~ 140 (477)
T PF11700_consen 84 ALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS--P--------------------GQWWLALVLFIIANVGY 140 (477)
T ss_pred HHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC--c--------------------chHHHHHHHHHHHHHHH
Confidence 99999999999998 76665554 4455556666666542 1 13333333444455666
Q ss_pred cCcccchhhhhhccCCCCChhhh--------------------hhhhhhHHHHHHHHHHHHHHhhhhhhhccc-------
Q 007604 162 GGTKPNILTIAADQFDEFEPKEK--------------------AHKLSFFNWWMFSIFFGTLLGNTVLVYIQD------- 214 (596)
Q Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~--------------------~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~------- 214 (596)
+.......+++.|..++++...+ .+|++..++-....++|+.+.-++.-.+..
T Consensus 141 ~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~ 220 (477)
T PF11700_consen 141 EASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTAS 220 (477)
T ss_pred HHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 67778888999999998862000 012777777777778888877655433211
Q ss_pred -cccchhhhHHHHHHHH-HHHHHHHhcCCcee-ccCCCC-ChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcC
Q 007604 215 -DVGWALGYGLPALGLA-IAIAIFLAGTPFYR-HKKPAG-SPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRG 290 (596)
Q Consensus 215 -~~g~~~~f~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (596)
..+.|..+.+.++..+ +++..++..+++.+ +..++. +......+.++..+|+.
T Consensus 221 ~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~----------------------- 277 (477)
T PF11700_consen 221 NTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEI----------------------- 277 (477)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHH-----------------------
Confidence 1235777777666543 33444444443322 111211 12222233333332221
Q ss_pred cccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhccc---ceeeeeeccccccCCC
Q 007604 291 KYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQIN---TLFVKQGTTLDRAIGS 367 (596)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~ 367 (596)
++.|.+...+. ..+++.-..+... ..+..+..+++
T Consensus 278 ----------------------------------~~~~~~~~fLi---a~~l~~dg~~ti~~~~~i~a~~~lg~s----- 315 (477)
T PF11700_consen 278 ----------------------------------RKLRQLFLFLI---AYFLYSDGVNTIISFAGIYATEVLGMS----- 315 (477)
T ss_pred ----------------------------------HhChHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCcC-----
Confidence 11111111111 1111111111111 11111111111
Q ss_pred cccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccc
Q 007604 368 SFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVE 447 (596)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (596)
......+..+..+..+++..+..++-+|++.| +.+.+.++.++..+.. ++++.... .+..|
T Consensus 316 --~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k---------~~~~l~~~l~~~~~i~-~~g~~G~~----~~~~g--- 376 (477)
T PF11700_consen 316 --TTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK---------TKRTLLISLILWIIIP-LYGLFGFW----PSFFG--- 376 (477)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---------hhHHHHHHHHHHHHHH-HHHHHHhh----hcccC---
Confidence 11111222233444444444444543333333 1133444443332222 22221000 00000
Q ss_pred cCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCc
Q 007604 448 KGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGW 527 (596)
Q Consensus 448 ~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w 527 (596)
..+.+.+.+..++.|+..+...+.+.++..+..|++..+...|++.++....+++||.+.+.+.+.++
T Consensus 377 -----~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg------- 444 (477)
T PF11700_consen 377 -----LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG------- 444 (477)
T ss_pred -----cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------
Confidence 12334455556789999999999999999999999999999999999999999999999999987663
Q ss_pred cccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 007604 528 ILNNLNVCHLDYYYAFFAILNVLNFVFFLVV 558 (596)
Q Consensus 528 ~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 558 (596)
+....+....++.+++++++...
T Consensus 445 --------~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 445 --------SQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred --------CchhHHHHHHHHHHHHHHHHhhc
Confidence 22334555566666666555443
No 115
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.49 E-value=1.9e-13 Score=139.33 Aligned_cols=177 Identities=16% Similarity=0.181 Sum_probs=146.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhc-chhHHH-HHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYL-GRYWTF-VIAFFFY 110 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~-Grk~~~-~~~~~~~ 110 (596)
|.+|++++.+++.++..|++..|.|.|+.+..|++..++++..+.|-.+...|++++||++||.+ |||... +++++..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999998 777554 3444444
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++.+....+++ .+..+..+..+++|+...+..-.+-....|..|++. -|++
T Consensus 332 ~~~~~~~w~~~~----------------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA 383 (448)
T COG2271 332 TASLVLYWLAPN----------------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTA 383 (448)
T ss_pred HHHHHHHHcCCC----------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccch
Confidence 555555444321 155667777778888888877777788899999886 8999
Q ss_pred HHHHHHHHHH-HHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHH
Q 007604 191 FNWWMFSIFF-GTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 191 ~~~~~~~~~i-g~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 237 (596)
.|....+..+ |..++....|++.+.+||...|.+..+..+++.+.+.
T Consensus 384 ~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 384 TGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred hchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 9999999988 9999999999999989999999877766666655443
No 116
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.48 E-value=1.4e-12 Score=142.85 Aligned_cols=180 Identities=13% Similarity=0.075 Sum_probs=131.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
.++.....+...++..+.+|++..++|.|+++.+|++..+.+.......++..++.+++|+++||+ |||+++.++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 344444444444566788899999999999989999998888888888899999999999999998 9999988887654
Q ss_pred HHHHHH-HHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhh
Q 007604 111 LMGMIV-LALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLS 189 (596)
Q Consensus 111 ~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (596)
.++.+. ...... .+...+++++++.+++.+...+....+..|.+|++. |++
T Consensus 327 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~ 378 (490)
T PRK10642 327 FVLAIPAFILINS----------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYS 378 (490)
T ss_pred HHHHHHHHHHHhC----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chH
Confidence 443332 222110 145566778888888777777778888899999987 999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhccccc-cchhhhHHHHHHHHHHHHHHHhc
Q 007604 190 FFNWWMFSIFFGTLLGNTVLVYIQDDV-GWALGYGLPALGLAIAIAIFLAG 239 (596)
Q Consensus 190 ~~~~~~~~~~ig~~l~~~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~ 239 (596)
+.++.+....+++.++|.+.+++.+.. +|+.++++..+..+++++..++.
T Consensus 379 ~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 379 ALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 999855556677788998999887654 36766665554444444444443
No 117
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.47 E-value=2.1e-12 Score=137.21 Aligned_cols=174 Identities=9% Similarity=0.002 Sum_probs=131.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+..+..+...+.....++....++|.|+++++|+++.+.+.+.+...++..++.+++|+++||+ |||+.+..+.+...+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~ 294 (393)
T PRK15011 216 RDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVC 294 (393)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 3333343444444445555667899999999999999999988888888888999999999998 999988877665555
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
......... +...+.+.+++.+++.|...+....+..|.+|++ |+++.+
T Consensus 295 ~~~~~~~~~------------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-------~g~~~~ 343 (393)
T PRK15011 295 FYAGMLMAH------------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-------AGSATT 343 (393)
T ss_pred HHHHHHHHh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------cchHHH
Confidence 443333221 4455566777777777766667778888988853 889999
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHh
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
+++...++|..++|.++|++.+..||+..|++.++..+++++..+.
T Consensus 344 ~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 344 LYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9888899999999999999999889999998887776666655544
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.46 E-value=1.5e-10 Score=118.82 Aligned_cols=348 Identities=12% Similarity=0.124 Sum_probs=206.9
Q ss_pred hhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcc-----hhHHHH-HHHHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 007604 61 TDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLG-----RYWTFV-IAFFFYLMGMIVLALSVSLSGLKPPPCNDI 134 (596)
Q Consensus 61 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-----rk~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 134 (596)
..++++...-.+.++....+.+. ..+..|+.+|+. + ||.-++ .+...+..+..+..++.-+..-.
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~------- 77 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAES------- 77 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccc-------
Confidence 45788888888888887777664 688999999998 7 555444 55666666666665553211100
Q ss_pred CCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccc
Q 007604 135 NSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQD 214 (596)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~ 214 (596)
+.+ ...+.........+...+.|+|.+....+..++.+|..|+++ |++..++.+.+.-+|.+++.++.+.+.+
T Consensus 78 ~~~-~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~ 150 (403)
T PF03209_consen 78 GQQ-SSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLD 150 (403)
T ss_pred ccc-cccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 000 011111223344455667899999999999999999999996 9999999999999999999999998877
Q ss_pred cccch----hhhHHHHHHHHHHHHHHHhcCCceeccC-CCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhc
Q 007604 215 DVGWA----LGYGLPALGLAIAIAIFLAGTPFYRHKK-PAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQR 289 (596)
Q Consensus 215 ~~g~~----~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (596)
.+... ..-..+.+..++.++..+-..++.++.. .++++.....+.....
T Consensus 151 ~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~-------------------------- 204 (403)
T PF03209_consen 151 PFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQV-------------------------- 204 (403)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHH--------------------------
Confidence 76622 2222222333444444443333332221 1111100000000000
Q ss_pred CcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCCCcc
Q 007604 290 GKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSF 369 (596)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 369 (596)
. ...+.|+++..+ ++....+++--...-++ --+...++ .+
T Consensus 205 ------------------------------~--~~~~a~~f~~fl--~l~t~a~~~QD~iLEPy-gg~Vfgms--v~--- 244 (403)
T PF03209_consen 205 ------------------------------W--ASPQARRFFVFL--FLGTLAFFMQDVILEPY-GGEVFGMS--VG--- 244 (403)
T ss_pred ------------------------------H--hCCChhHHHHHH--HHHHHHHHhhHHHcCCc-hhHHcCCC--HH---
Confidence 0 001122222211 11222222211111111 00001111 11
Q ss_pred cccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccC
Q 007604 370 KIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKG 449 (596)
Q Consensus 370 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (596)
.+...+.....+.+++..+..++.. || .++.+....|..+.++++....+...
T Consensus 245 --eTT~Lta~~~~G~L~G~~~~g~~l~---~~-------~~~~~~a~~G~~~~~~~f~lii~a~~--------------- 297 (403)
T PF03209_consen 245 --ETTRLTAFWGGGTLLGMLLAGFLLS---RR-------LGKKRTAALGCLLGALAFALIILAGP--------------- 297 (403)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhc---CC-------CCchHHHHHHHHHHHHHHHHHHHHHh---------------
Confidence 2344556666777777777776543 23 23334455566666666655443321
Q ss_pred CcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhcccc
Q 007604 450 QQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITK 520 (596)
Q Consensus 450 ~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~ 520 (596)
.-+.+.+.+..+++|++.++......+...+.++++..|+.+|.|...+.++..++..+.+.+.|...
T Consensus 298 ---~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~ 365 (403)
T PF03209_consen 298 ---LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR 365 (403)
T ss_pred ---cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12456777888999999999999999999999999999999999999999999999999998887653
No 119
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.44 E-value=2.3e-12 Score=140.24 Aligned_cols=176 Identities=14% Similarity=0.073 Sum_probs=133.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+.+|.+.+..++....+++...++|.|+++.+|++..++++..+...++..++.+++|+++||+ |||+.+.+...+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4578888888888888888889999999999999999999999999999999999999999998 999887765544443
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+..+...... .+....++.+++.|++.............|.+|++. |+++.+
T Consensus 337 ~~~~~~~~~~----------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~g 388 (467)
T PRK09556 337 IFTLGVYQHA----------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANG 388 (467)
T ss_pred HHHHHHHHhc----------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHH
Confidence 3322222210 134445566666665443333333456679999886 999999
Q ss_pred HHHHHHHH-HHHHhhhhhhhccc------------cccchhhhHHHHHHHHHHHHHHH
Q 007604 193 WWMFSIFF-GTLLGNTVLVYIQD------------DVGWALGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 193 ~~~~~~~i-g~~l~~~~~~~l~~------------~~g~~~~f~~~~~~~~~~~~~~~ 237 (596)
+.+...++ |+.++|.+.|++.+ ..||+..|++.++..+++.+..+
T Consensus 389 i~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 389 IKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 99988887 77999999999998 57899999887766666655444
No 120
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.43 E-value=2.3e-12 Score=123.79 Aligned_cols=378 Identities=11% Similarity=0.091 Sum_probs=221.9
Q ss_pred HHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 007604 53 SSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCN 132 (596)
Q Consensus 53 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 132 (596)
..-+.++.+...+.+.++..++-+.|+.-..+.+.++|++.||.+|-|..-++-+++..+|.++.+...-+
T Consensus 63 p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~--------- 133 (459)
T KOG4686|consen 63 PGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGIS--------- 133 (459)
T ss_pred chhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHH---------
Confidence 34567788888888889999999999999999999999999999998876666666667777776654211
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhc
Q 007604 133 DINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYI 212 (596)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l 212 (596)
...+++.++|++.|+|.-....+...+...+|..+| .+..++++.....+|+..-..+.+++
T Consensus 134 ------------~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 134 ------------HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred ------------HHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeeecHHH
Confidence 268889999999999988888888999999999987 99999999999999998777777777
Q ss_pred cccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcC--
Q 007604 213 QDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRG-- 290 (596)
Q Consensus 213 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 290 (596)
.+..+ .++-......+++.+.+-.+. ...+-+....... . ++.+++.
T Consensus 196 y~~~~---~~~~~~ghT~LG~~l~~~~~t---------c~~slical~lg~-~------------------D~rAerilh 244 (459)
T KOG4686|consen 196 YDTMG---RMFPGVGHTLLGLWLCFEVKT---------CKQSLICALSLGL-S------------------DDRAERILH 244 (459)
T ss_pred HHHHH---HhcccchHHHHHHHHHHHHHH---------HHHHHHHHHHhhh-h------------------hhHHHHHHh
Confidence 65433 111011112222222111000 0000000000000 0 0000000
Q ss_pred --cccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCCCc
Q 007604 291 --KYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSS 368 (596)
Q Consensus 291 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 368 (596)
..+.++.+ +.+++.+.+.-+-++ ....++||.....+.+.-.. ......| -
T Consensus 245 ~e~g~~Ge~p---------------------kLtdv~~f~ppfw~~--~iicv~yyva~fPFi~lg~~---fF~~rfG-l 297 (459)
T KOG4686|consen 245 LEEGFLGEEP---------------------KLTDVNTFYPPFWVL--VIICVLYYVAWFPFITLGPM---FFQKRFG-L 297 (459)
T ss_pred hhcCcccCCc---------------------ccccccccCccHHHH--HHHHHHHHHHHHHHhhhhHH---HHHHhhC-C
Confidence 00000000 111222222111111 11122333332222211100 0011111 0
Q ss_pred ccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCcccc
Q 007604 369 FKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEK 448 (596)
Q Consensus 369 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (596)
.......+.+..-....+..|..+.++||.+++. ..+..+.++..++-....+.
T Consensus 298 S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~----------~wv~~a~~~tl~~H~~l~Ft---------------- 351 (459)
T KOG4686|consen 298 SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL----------WWVASACILTLLGHSGLFFT---------------- 351 (459)
T ss_pred ChhhccchhhhhhhhhhhhhhhHHHhHhhhccee----------hhHHHHHHHHHHHhhhHHhh----------------
Confidence 0112233334444556667889999999999884 22444444444443333332
Q ss_pred CCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCcc
Q 007604 449 GQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWI 528 (596)
Q Consensus 449 ~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~ 528 (596)
.+.-...+.++|++..+..-..|..++..+|++.-|++.|..+..+.+|-.+.+.+.+.+.+.- +. +
T Consensus 352 -------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~---g~--y- 418 (459)
T KOG4686|consen 352 -------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGD---GS--Y- 418 (459)
T ss_pred -------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCC---Cc--h-
Confidence 1222345678888888888888999999999999999999999999999999999999887522 11 1
Q ss_pred ccCCcccchhHHHHHHHHHHHHHHHHHHHHhh
Q 007604 529 LNNLNVCHLDYYYAFFAILNVLNFVFFLVVAK 560 (596)
Q Consensus 529 ~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 560 (596)
...+.+|.....+++....+.+...+
T Consensus 419 ------~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 419 ------DNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHhheec
Confidence 11344555555555555555555433
No 121
>PRK09952 shikimate transporter; Provisional
Probab=99.39 E-value=7.8e-12 Score=134.85 Aligned_cols=181 Identities=12% Similarity=0.001 Sum_probs=130.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
++.........++..+.+|....+++.|+++.+|++......+.........++.++.|+++||+ |||+++..+.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~ 327 (438)
T PRK09952 249 PGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGT 327 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 33334344456667788888899999999999999988766666666777888899999999998 99999988876655
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++.+.+...... ......+.+..++.+++.+...+..+++.+|.+|.+. |+++.
T Consensus 328 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~ 381 (438)
T PRK09952 328 LSAFPFFMALEA--------------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGA 381 (438)
T ss_pred HHHHHHHHHHHc--------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHH
Confidence 544333322100 0123334445566678888878888999999999976 98888
Q ss_pred HHHH-HHHHHHHHHhhhhhhhccccc--cchhhhHHHHHHHHHHHHHHHhc
Q 007604 192 NWWM-FSIFFGTLLGNTVLVYIQDDV--GWALGYGLPALGLAIAIAIFLAG 239 (596)
Q Consensus 192 ~~~~-~~~~ig~~l~~~~~~~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~ 239 (596)
++.+ .+..+|+.++|.+.+++.+.. +|+.++.+.++..+++.+..+..
T Consensus 382 g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 382 GVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 8844 445689999999999987643 48888777766666666555544
No 122
>PRK03699 putative transporter; Provisional
Probab=99.39 E-value=7.9e-12 Score=132.86 Aligned_cols=170 Identities=14% Similarity=0.063 Sum_probs=133.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+.++.+.+..++.....+++..++|.|+++.+|++..+.+.+.+.+.++..++.+++|+++||+ |||+.+.....+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 3455566666666677778889999999999999999999999999999999999999999998 999998877766655
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+..+..... +...+.+..++.|++.+...+...++..+..|++ +++..+
T Consensus 284 ~~~~~~~~~------------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g 332 (394)
T PRK03699 284 LMYLFVNTD------------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVN 332 (394)
T ss_pred HHHHHHHcC------------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHH
Confidence 544443322 3444455566778877777788788888877654 456677
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHH
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIA 234 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 234 (596)
+...+.++|..++|.+.|++.+..||+..+++.++..+++.+
T Consensus 333 ~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 333 FILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 878888999999999999999989999999877766555543
No 123
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=1.2e-11 Score=130.07 Aligned_cols=165 Identities=10% Similarity=-0.033 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 007604 42 EVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSV 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~ 121 (596)
.++..........+++.|+.+++|.++.+.+++.+.......++.+++|+++||+ |||+++.++.++..++.+......
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 286 (375)
T TIGR00899 208 CTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAADN 286 (375)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444556788899889999999999988887778888899999999998 999999887766555544443332
Q ss_pred hccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHH
Q 007604 122 SLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFG 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 201 (596)
+.+.+++.+++.|++.+...+....+..|..|++ ++++.++++...++|
T Consensus 287 ------------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g 335 (375)
T TIGR00899 287 ------------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-------AGAATTLYTNTGRVG 335 (375)
T ss_pred ------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-------hhHHHHHHHHHHHHH
Confidence 4555666777888888888888888888988754 679999999999999
Q ss_pred HHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHh
Q 007604 202 TLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 202 ~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
..++|.+.|++.+..||+..|++.++..+++.+..+.
T Consensus 336 ~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 336 WIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 9999999999998889999999888776666655443
No 124
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.39 E-value=6.2e-12 Score=131.73 Aligned_cols=169 Identities=12% Similarity=0.051 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
..+.+....++..+.......+.+.|. +++|.++.+.+.+.+.+.++..++.+++|+++||+ |||+.+.++..+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHH
Confidence 344444444444455555556666665 46899999999999999999999999999999998 9999999988888888
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
.++.....+ .+...+++..++.+++.+...+..+++..|.+|+++ |++..++
T Consensus 284 ~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~ 335 (377)
T TIGR00890 284 MAAMLFIPM----------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGF 335 (377)
T ss_pred HHHHHHccc----------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHH
Confidence 776655421 022234455667788888888888899999999886 9999999
Q ss_pred HHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHH
Q 007604 194 WMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIA 232 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~ 232 (596)
.+...++|..++|.+.|++.+..||+..|++.++..+++
T Consensus 336 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 336 LYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 999999999999999999999899999998877655544
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.38 E-value=1.1e-11 Score=131.97 Aligned_cols=169 Identities=9% Similarity=0.073 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007604 44 FERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSL 123 (596)
Q Consensus 44 ~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~ 123 (596)
+..+.++....+++.|+.+ .|. .+.+...+.+.++..++.++.|++.||+ |||+.+..+..+..++.++.....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~-- 300 (399)
T PRK05122 227 LASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP-- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc--
Confidence 3445566667788888764 455 3456667778888999999999999998 999999988888777776666542
Q ss_pred cCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHH
Q 007604 124 SGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTL 203 (596)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 203 (596)
+...+++.+++.|++.+...+.......|.+|+++ |+++.++++...++|..
T Consensus 301 ----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ 352 (399)
T PRK05122 301 ----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSLG 352 (399)
T ss_pred ----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHH
Confidence 45556677888999998888888888889888775 99999999999999999
Q ss_pred HhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceecc
Q 007604 204 LGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHK 246 (596)
Q Consensus 204 l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 246 (596)
+++.+.|++.+..||+..|++.++..+++++..+..+++.+++
T Consensus 353 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (399)
T PRK05122 353 ITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRA 395 (399)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 9999999999888999999988877777766655555544443
No 126
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.38 E-value=8e-11 Score=121.06 Aligned_cols=387 Identities=9% Similarity=-0.011 Sum_probs=214.6
Q ss_pred HHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 007604 54 SNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCND 133 (596)
Q Consensus 54 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 133 (596)
+-..+|....+| +...+-|...+|.+.+....+.+-|+.|++ |-|.+++++.++.++|..+=..+. .|.+.+
T Consensus 65 a~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~~----- 136 (480)
T KOG2563|consen 65 APINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVPP----- 136 (480)
T ss_pred hhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Cccccc-----
Confidence 345556777777 777788999999999999999999999998 999999999999999998877664 222111
Q ss_pred CCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcc
Q 007604 134 INSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQ 213 (596)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~ 213 (596)
.......+.+..+.+.+.-.....-+-+..-+||+++ |..+..+-.++..+|.++|.++...+.
T Consensus 137 ----------~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 137 ----------LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred ----------cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceec
Confidence 1112366677888888777777776777888999997 999999888888888888876666654
Q ss_pred cc------ccchh--hhHHHHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHH
Q 007604 214 DD------VGWAL--GYGLPALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEY 285 (596)
Q Consensus 214 ~~------~g~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (596)
.+ ..|.. .|+....+..+.++...+.+++.++.||..+...+.
T Consensus 201 ~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~----------------------------- 251 (480)
T KOG2563|consen 201 PSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ----------------------------- 251 (480)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh-----------------------------
Confidence 33 23554 233222333333333344444433333322110000
Q ss_pred hhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccC
Q 007604 286 YAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAI 365 (596)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 365 (596)
+.+..+ .. .+...+++.++....+......|+..+..+......+.. +
T Consensus 252 -------~~~f~~--------si------------~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY--~--- 299 (480)
T KOG2563|consen 252 -------DASFPK--------SI------------KSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGY--E--- 299 (480)
T ss_pred -------cCcHHH--------HH------------HHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccC--C---
Confidence 000000 00 001122233333333333334444443322211111100 0
Q ss_pred CCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhccC
Q 007604 366 GSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIII-MVIASFTERYRLSVAKDHG 444 (596)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~-~~~~~~~~~~~~~~~~~~~ 444 (596)
+...+.......+..+++..+.+. +.+|..+. +..+.+-+....++ +.+..... +
T Consensus 300 ----~~~aG~ig~l~iv~Gmlga~~~gi----i~Dktk~f------k~~~~v~~~~~~v~~~~l~~~t~--------~-- 355 (480)
T KOG2563|consen 300 ----GVFAGYIGALMIVAGMLGALASGI----IADKTKKF------KLTTLVLYLFALVGTLMLLTCTL--------F-- 355 (480)
T ss_pred ----ccccchhHHHHHHHHHHHHHHHHh----hhhhhhhH------HHHHHHHHHHHHHHHHHHHHhhc--------c--
Confidence 011222233333334444444444 45553221 12233333333333 21111110 0
Q ss_pred ccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCC
Q 007604 445 IVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGH 524 (596)
Q Consensus 445 ~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~ 524 (596)
.-+.+++.....++|+++....|...|+..|..=+..-|+..|+.++...+-..+-..+.+...+
T Consensus 356 --------~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~------- 420 (480)
T KOG2563|consen 356 --------LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAE------- 420 (480)
T ss_pred --------CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhh-------
Confidence 12334455556788888889999999999999877888899999888777766666666555542
Q ss_pred CCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 007604 525 KGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKAEVS 569 (596)
Q Consensus 525 ~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 569 (596)
+.+.+++. ...-+.++...++++.+..++...|+++..+.
T Consensus 421 ~~~~~~~~-----~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e~ 460 (480)
T KOG2563|consen 421 DLGPPGNT-----FPANIFLTVSALLGAILVAFFRPDYRRLRAEA 460 (480)
T ss_pred ccCCCCCC-----ccchhHhHHHHHHHHHHHhhhhhhHHhHhhhh
Confidence 11211111 11123445555666666666666666655543
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.38 E-value=8.8e-12 Score=132.84 Aligned_cols=170 Identities=8% Similarity=-0.044 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMI 115 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 115 (596)
+.+....++.....+.+..++|.|+.+ .|.+..+.+.+.+.+.++..++.++.|+++||+ |||+.+..+.+...++.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 223 LLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHH
Confidence 333344444455666777888988875 799999999999999999999999999999998 999998887666666555
Q ss_pred HHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHH
Q 007604 116 VLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWM 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (596)
+..... +...+.+..++.|++.++..+...++..|.+|+++ |++..++.+
T Consensus 301 ~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~ 350 (406)
T PRK11551 301 ALAAAP------------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAV 350 (406)
T ss_pred HHHhcC------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHH
Confidence 544332 34445556667788777778888999999999986 999999999
Q ss_pred HHHHHHHHHhhhhhhhcccccc-chhhhHHHHHHHHHHHHHHH
Q 007604 196 FSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 196 ~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~ 237 (596)
....+|..++|.+.|++.+..+ |...+++.....+++.+..+
T Consensus 351 ~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 351 AVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987644 55566655555544444433
No 128
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.38 E-value=8.6e-12 Score=140.68 Aligned_cols=134 Identities=10% Similarity=-0.012 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHH
Q 007604 74 NVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAA 153 (596)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (596)
...+..++..++.+++|+++||+ |||+++++++++.+++.++.++.. +...+++.
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~------------------------s~~~ll~~ 654 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN------------------------SESAMIAL 654 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc------------------------cHHHHHHH
Confidence 34566688899999999999998 999999999999888888777653 34455666
Q ss_pred HHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHH
Q 007604 154 LYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAI 233 (596)
Q Consensus 154 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 233 (596)
+++.+++.++..+...++++|++|++. |++++++.+...++|+++||.+++++... +...+|++.++..+++.
T Consensus 655 ~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ 727 (742)
T TIGR01299 655 LCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGG 727 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHH
Confidence 777788777788889999999999986 99999999999999999999999887653 45677877776666655
Q ss_pred HHHHhc
Q 007604 234 AIFLAG 239 (596)
Q Consensus 234 ~~~~~~ 239 (596)
++.+.+
T Consensus 728 ll~~~L 733 (742)
T TIGR01299 728 LLALKL 733 (742)
T ss_pred HHHHhC
Confidence 554443
No 129
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.37 E-value=3e-11 Score=128.36 Aligned_cols=178 Identities=16% Similarity=0.089 Sum_probs=137.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+..+.+.+..++..+.++++..++|.|+.+ +|++..+.+...+.+.++..++.++.|+++||+ |||+.+.++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 345555556666777888899999999985 799999999999999999999999999999998 999999988877777
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.++..... .+...+ ..++.|++.+...|.......+.+++++ .|++.++
T Consensus 283 ~~~~~~~~~-----------------------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g 332 (393)
T PRK09705 283 GFCGFIWLP-----------------------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVA 332 (393)
T ss_pred HHHHHHHcc-----------------------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHH
Confidence 766544321 022122 2245678888888888777888886543 3899999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHHHHHHHHHHHhcCCc
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAIAIFLAGTPF 242 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (596)
+.+...++++.++|.+.|++.+..| |+..|++.++..++.+.......++
T Consensus 333 ~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 333 FMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999998876 8888888776666555554544443
No 130
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.37 E-value=2.2e-11 Score=125.97 Aligned_cols=171 Identities=19% Similarity=0.247 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhH-HHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYW-TFVIAFFFYLMG 113 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~-~~~~~~~~~~i~ 113 (596)
.+...+..++..........+.+.|+.+.+|.+..+.+.......++..++.++.|++.||+ |||+ .+.++..+..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHH
Confidence 33444445556666667778888888888899999999999999999999999999999998 9999 999999888888
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
.+...... +...+++..++.|++.+...+...++..|..|+++ |++.++.
T Consensus 256 ~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 305 (352)
T cd06174 256 LLLLALAP------------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGL 305 (352)
T ss_pred HHHHHHhc------------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHH
Confidence 88777653 46667788999999999999999999999999875 9999999
Q ss_pred HHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHH
Q 007604 194 WMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIF 236 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 236 (596)
.+...++|..+++.+.+++.+..+|+..+++.++..+++.+..
T Consensus 306 ~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 306 FNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 9999999999999999999988999999998887766665543
No 131
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.36 E-value=9.2e-12 Score=133.36 Aligned_cols=175 Identities=9% Similarity=0.040 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC--------hhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHG--------TVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAF 107 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~--------~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~ 107 (596)
+.+++..++..........+++.|+.+ .|.+ ..+.+...+...+...++.++.|+++||+ |||+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~ 288 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSL 288 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence 344444444444444455777888764 4544 35668889999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhh
Q 007604 108 FFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHK 187 (596)
Q Consensus 108 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 187 (596)
++..++..++..... ...+...+++.+++.|++.+...+....++.|.+|+++ |
T Consensus 289 ~~~~v~~~l~~~~~~--------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~ 342 (418)
T TIGR00889 289 VAWALRFGFFAYGDP--------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------R 342 (418)
T ss_pred HHHHHHHHHHHHcCc--------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------H
Confidence 988887766655310 00134556778889999999888999999999999886 9
Q ss_pred hhhHHHHH-HHHHHHHHHhhhhhhhcccc------ccchhhhHHHHHHHHHHHHHHHh
Q 007604 188 LSFFNWWM-FSIFFGTLLGNTVLVYIQDD------VGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 188 ~~~~~~~~-~~~~ig~~l~~~~~~~l~~~------~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
+++.++.+ ....+|.++||.++|++.+. +||+.+|.+.++..+++.+.++.
T Consensus 343 g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~ 400 (418)
T TIGR00889 343 ASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMI 400 (418)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999997 56789999999999999876 46999998877665555444433
No 132
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.35 E-value=8.3e-12 Score=131.59 Aligned_cols=169 Identities=12% Similarity=0.016 Sum_probs=130.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
++.++......++....++....+++.|+++++|.+..+.+.+.....++..++.+++|+++||+ |||+.+..+..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~ 296 (394)
T TIGR00883 218 RKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAA 296 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 34466666666777778888889999999889999999999999999999999999999999998 99998876554443
Q ss_pred HHH-HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 112 MGM-IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 112 i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
+.. .+...... ..+...+++..++.+++.+...+...+++.|.+|++. |+++
T Consensus 297 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~ 349 (394)
T TIGR00883 297 LLAVPLLMALLD---------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTG 349 (394)
T ss_pred HHHHHHHHHHhc---------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeE
Confidence 332 22211110 0144555666778888888888999999999999886 8999
Q ss_pred HHH-HHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHH
Q 007604 191 FNW-WMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALG 228 (596)
Q Consensus 191 ~~~-~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~ 228 (596)
.+. ++....+|..++|.++|++.+..| |+..++..++.
T Consensus 350 ~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 350 ASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred eeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 887 455667899999999999998888 88776655543
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=99.33 E-value=7.5e-11 Score=125.15 Aligned_cols=175 Identities=8% Similarity=-0.083 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
++......++.....++...+++.|+.+..|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+ .+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 33344444555556666677888888888999999999999999999999999999999998 988654 4444444443
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
.+..... .+...+.+..++.|++.+...+.....+.+..|+ + |+++.+++
T Consensus 285 ~~l~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~------~~~~~g~~ 334 (390)
T PRK03545 285 LLLLPAA-----------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-A------TDVAMALF 334 (390)
T ss_pred HHHHHHh-----------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-c------HHHHHHHH
Confidence 3332211 1455666777788888887777778888887764 3 89999999
Q ss_pred HHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCC
Q 007604 195 MFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTP 241 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (596)
+...++|..+||.++|++.+..|++..|++.+.+.+++.+......+
T Consensus 335 ~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 335 SGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 98999999999999999999999999999888877777766555443
No 134
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.32 E-value=4.7e-11 Score=125.55 Aligned_cols=179 Identities=13% Similarity=-0.006 Sum_probs=128.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHH-HHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWT-FVIAFFFYL 111 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~-~~~~~~~~~ 111 (596)
+..+..++..++..........+++.|+.+.+|.+..+.+++.+...++..++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4566677777778888888889999999999999999999999999999999999999999998 98861 111111111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++.++......... ...+.........+.+.+.+ ..+...++..|.+|+++ |++..
T Consensus 294 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~~ 349 (399)
T TIGR00893 294 IAGLVLSLLMFATN-----------------YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGLTG 349 (399)
T ss_pred HHHHHHHHHHHHhc-----------------cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHHHH
Confidence 11111111100000 00022223233333334433 78899999999999886 99999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHHHHHHHHHH
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAIAIF 236 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~ 236 (596)
++.+...++|..++|.+.|++.+..| |+..|++.++..+++.+..
T Consensus 350 ~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 350 GLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888 9999988777666555443
No 135
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.31 E-value=6.6e-11 Score=124.99 Aligned_cols=191 Identities=13% Similarity=0.082 Sum_probs=139.8
Q ss_pred CCCcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcch-h
Q 007604 23 PVRRSKRGGWRACSFVVVYEVFERMAYHGISSNLVMYLTD-KLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGR-Y 100 (596)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr-k 100 (596)
...+..+.+||.+++..+.++....-+..+....-.|+++ +.+.+.+..|+++++..++..++.+..|+-..|. |+ |
T Consensus 24 ~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k 102 (488)
T KOG2325|consen 24 SPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVK 102 (488)
T ss_pred ccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcc
Confidence 3444556789999999888888877777666666678774 4788889999999999999999999999999998 75 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCC
Q 007604 101 WTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFE 180 (596)
Q Consensus 101 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 180 (596)
+-++.+.++.++|.++.......+ +...+.++++|++.|+|.|.. ...-+|+++....++
T Consensus 103 ~Pli~s~ii~~~g~llY~~l~~~~-------------------~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d 162 (488)
T KOG2325|consen 103 KPLIVSFLIAIIGNLLYLALAYVP-------------------NGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED 162 (488)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhcc-------------------cchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc
Confidence 778889999999998884443322 125778889999999997754 566688888777665
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcc----cc---------ccchhhhHHHHHHHHHHHHHHHhcC
Q 007604 181 PKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQ----DD---------VGWALGYGLPALGLAIAIAIFLAGT 240 (596)
Q Consensus 181 ~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~----~~---------~g~~~~f~~~~~~~~~~~~~~~~~~ 240 (596)
|.++++....+..+|..+||.+...+. .. .-|..+-|+.++..++.++++...-
T Consensus 163 ------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f 229 (488)
T KOG2325|consen 163 ------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFF 229 (488)
T ss_pred ------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhe
Confidence 888888777766777777776543321 11 1144566677766655555544433
No 136
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.31 E-value=1e-11 Score=110.35 Aligned_cols=134 Identities=15% Similarity=0.218 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHH
Q 007604 74 NVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAA 153 (596)
Q Consensus 74 ~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (596)
..+.+.++..++.++.|+++||+ |||+.+..+..+..++.+...... +...+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~ 57 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS------------------------NITVLIIA 57 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc------------------------cHHHHHHH
Confidence 34556788899999999999998 999999999888888877776543 56677788
Q ss_pred HHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHH
Q 007604 154 LYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAI 233 (596)
Q Consensus 154 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 233 (596)
+++.|++.+...+...++..|.+|+++ |++..++.+...++|..++|.+.+++.+..+|++.|++.++..+++.
T Consensus 58 ~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 58 RFLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAF 131 (141)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999886 99999999999999999999999999888899999988776655555
Q ss_pred HHHHh
Q 007604 234 AIFLA 238 (596)
Q Consensus 234 ~~~~~ 238 (596)
+....
T Consensus 132 ~~~~~ 136 (141)
T TIGR00880 132 ILLAF 136 (141)
T ss_pred HHHhh
Confidence 44443
No 137
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.31 E-value=8.1e-11 Score=124.55 Aligned_cols=169 Identities=8% Similarity=-0.116 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.++...+..++.........++.+.|+++ +|.++.+.+.+.+...++..++.++.|++.||+ |+|+++.++.++..+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 456666666777777777888899999975 899999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
..++.+.++ +.+.+++..++.|+..|...+....++.+. |+++ |+++.+
T Consensus 283 ~~~~~~~~~------------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~ 331 (382)
T TIGR00902 283 RWAIIGAIE------------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQA 331 (382)
T ss_pred HHHHHHhHh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHH
Confidence 888877654 677788889999999999999999999987 7765 888888
Q ss_pred HHH-HHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHH
Q 007604 193 WWM-FSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 193 ~~~-~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (596)
+++ ....+|..+|+.++|++.+..|+ ..|++.++..++++++
T Consensus 332 ~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 332 LYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 876 46789999999999999999886 5666666655555544
No 138
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.30 E-value=1.4e-11 Score=132.04 Aligned_cols=159 Identities=11% Similarity=0.003 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHhhhc---CCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007604 47 MAYHGISSNLVMYLTDKL---HHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSL 123 (596)
Q Consensus 47 ~~~~~~~~~l~~yl~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~ 123 (596)
..+......++.|+.+.+ +.+..+.+.+.++..++..++.+++|+++||+ |||+.+.++.++..++.++..++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~-- 313 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT-- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc--
Confidence 333334445677766543 56667888999999999999999999999998 999999998888888877776653
Q ss_pred cCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH-HHHHHHHHH
Q 007604 124 SGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW-WMFSIFFGT 202 (596)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~ig~ 202 (596)
+...+++.+++.+++.+...+....++.|.+|++. |++..+. ++....+|.
T Consensus 314 ----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~ 365 (420)
T PRK09528 314 ----------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGA 365 (420)
T ss_pred ----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHH
Confidence 56667778888888888777778888999999875 7777655 667788999
Q ss_pred HHhhhhhhhccccccchhhhHHHHHHHHHHHHHH
Q 007604 203 LLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIF 236 (596)
Q Consensus 203 ~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 236 (596)
+++|.+.|++.+..||+.+|.+.++..++..++.
T Consensus 366 ~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 366 VFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998776655444333
No 139
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.29 E-value=7.2e-11 Score=125.75 Aligned_cols=164 Identities=12% Similarity=0.067 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCChh---hhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 007604 44 FERMAYHGISSNLVMYLTDKLHHGTV---KSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALS 120 (596)
Q Consensus 44 ~~~~~~~~~~~~l~~yl~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~ 120 (596)
+.......+..+++.|+.+..+.... ..+.+.++..++..++.+..|+++||+ |||+++..+..+..++.+.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
T PRK09874 230 IIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFV 308 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHh
Confidence 33344445567778887765443221 244555667788889999999999998 99999999888777766665544
Q ss_pred hhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHH
Q 007604 121 VSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFF 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 200 (596)
. +...+++.+++.|++.+...|...+++.+..|++. |++.+++++...++
T Consensus 309 ~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~ 358 (408)
T PRK09874 309 Q------------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRDI 358 (408)
T ss_pred c------------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHHH
Confidence 2 45567778888999999999999999999888876 99999999999999
Q ss_pred HHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHh
Q 007604 201 GTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 201 g~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
|..+||.++|++.+..||+..|++.+++.+++.+..+.
T Consensus 359 g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 359 GNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999899999999888776666655443
No 140
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.29 E-value=7e-11 Score=127.31 Aligned_cols=178 Identities=12% Similarity=0.028 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcch--hHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGR--YWTFVIAFFFY 110 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr--k~~~~~~~~~~ 110 (596)
+.++.+.+..++....++++..++|.|+.+++|++..+.+...+.+.++..++.+++|+++||+.+| +.......+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI 322 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH
Confidence 3466666666666777778888999999888999999999999999999999999999999997322 22222221111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.+....+..... .+.....+..++.|++.............|.+|++. |++.
T Consensus 323 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 374 (434)
T PRK11663 323 LLSVGSLWLMPF----------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAA 374 (434)
T ss_pred HHHHHHHHHccc----------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhH
Confidence 111111111110 022222233333444332222233456788888775 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHh
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
.++.+...++|..++|.+.|++.+..||+..|++.+++.+++.+..+.
T Consensus 375 ~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 375 TGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887776655544443
No 141
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=6.9e-10 Score=113.74 Aligned_cols=343 Identities=13% Similarity=0.041 Sum_probs=183.2
Q ss_pred HHHHHHHHhhhcCC---Ch----hhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHH-HHHHHHHHHHHHHHHHHhhcc
Q 007604 53 SSNLVMYLTDKLHH---GT----VKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTF-VIAFFFYLMGMIVLALSVSLS 124 (596)
Q Consensus 53 ~~~l~~yl~~~lg~---~~----~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~-~~~~~~~~i~~~~~~~~~~~~ 124 (596)
+..+|.|+++..+- ++ +..+...++..+..++..|+-|.++|.. |+||-. -....+..+.+..+.++..
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~~-- 111 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIPP-- 111 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhCC--
Confidence 45678888876544 33 3455667788888999999999999998 865544 4445556666666666531
Q ss_pred CCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHH
Q 007604 125 GLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLL 204 (596)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l 204 (596)
..++....+...+..++..+......++..|..++++ .++..+.-+...++|+.+
T Consensus 112 -------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~i 166 (438)
T COG2270 112 -------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSVI 166 (438)
T ss_pred -------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccchH
Confidence 1245555566677888888888899999999999876 344333333344555544
Q ss_pred hhhhh--hh-cc---------------ccccchhhhHHHHHHHHHHHHHHHhcCCceeccC-CCCChhHHHHHHHHHHHH
Q 007604 205 GNTVL--VY-IQ---------------DDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKK-PAGSPFTRMAKVIVAAIR 265 (596)
Q Consensus 205 ~~~~~--~~-l~---------------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 265 (596)
.-+.. +. .. +...-|..+.++++-.++..+-++...++..+.. +..+......+.++.-++
T Consensus 167 ~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k 246 (438)
T COG2270 167 LLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPTALRNGFKELKSTFK 246 (438)
T ss_pred HHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccchHHHHHHHHHHHHHHH
Confidence 43321 10 11 2223555565555443333322233222222111 111111111222222221
Q ss_pred hcCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHH-HHHhhhhh
Q 007604 266 KRNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPI-LVATFVPS 344 (596)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~-~~~~~~~~ 344 (596)
+. ++++.+.+.+.. ++..=..-
T Consensus 247 ~i---------------------------------------------------------~~~~~i~~FLiA~~~~~DGv~ 269 (438)
T COG2270 247 EI---------------------------------------------------------RGRKNLVLFLIARFFYIDGVN 269 (438)
T ss_pred HH---------------------------------------------------------hcccchHHHHHHHHHHHhhHH
Confidence 11 111111111110 00000000
Q ss_pred hhhhcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHH
Q 007604 345 TMLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHII 424 (596)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~ 424 (596)
.... +.+.+-.. +.++. ...-.++.....+..++++.+.+++-+|++.| +.+.+++++..+
T Consensus 270 til~-~~~~fg~~----~~gls---~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----------~vl~~~lvi~~~ 330 (438)
T COG2270 270 TILA-MGGVFGAA----DLGLS---STELLLIGIALSVVAALGAIIAGFLDERFGSK-----------PVLMIGLVILSI 330 (438)
T ss_pred HHHH-HHHHHHHH----HcCcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----------eeehHHHHHHHH
Confidence 0000 00111000 00000 11111222223334444444555544444433 335555555544
Q ss_pred HHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHH
Q 007604 425 IMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVG 504 (596)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig 504 (596)
..+...+.+ ....+.+.-+++|+..+.....+-+|..+.+|++..++..|+++++...+
T Consensus 331 ~~~~~~~~~---------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~ 389 (438)
T COG2270 331 AALYLIFLE---------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAA 389 (438)
T ss_pred HHHHHHHcc---------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHH
Confidence 433332221 12233444588899999999999999999999999999999999999999
Q ss_pred HHHHhHHHhhhhcccc
Q 007604 505 NFLSSFLLSTVSDITK 520 (596)
Q Consensus 505 ~~lg~~~~~~i~~~~~ 520 (596)
.++||.+.+.+.+.++
T Consensus 390 S~~gp~lv~v~t~iTg 405 (438)
T COG2270 390 SFLGPFLVAVITQITG 405 (438)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999987663
No 142
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.28 E-value=6.3e-11 Score=128.33 Aligned_cols=176 Identities=15% Similarity=0.086 Sum_probs=123.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcch--hHHH-HHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGR--YWTF-VIAFFF 109 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr--k~~~-~~~~~~ 109 (596)
+.+|...+..++.....++...++|.|+++..|++..+.+.....+.++..++.+++|+++||+ ++ |+.. .....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~-~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCcchHHHHHHHH
Confidence 4567777777777788888899999999998999999999998899999999999999999997 53 3322 222222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhh
Q 007604 110 YLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLS 189 (596)
Q Consensus 110 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (596)
..++.++..+... .+....++..++.|.+..........+..|.+|++. |++
T Consensus 332 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~ 383 (452)
T PRK11273 332 VTIATIVYWLNPA----------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGT 383 (452)
T ss_pred HHHHHHHHHHhcc----------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhh
Confidence 3333332222110 023333344444444433222333456779999886 999
Q ss_pred hHHHHHHHHHHHHHH-hhhhhhhccccccchhhhHHHHHHHHHHHHHHH
Q 007604 190 FFNWWMFSIFFGTLL-GNTVLVYIQDDVGWALGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 190 ~~~~~~~~~~ig~~l-~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 237 (596)
+.++.+...++|+.+ +|.+.|++.+..||+..|++.++..+++++...
T Consensus 384 ~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 384 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 999999888888765 799999999999999999888776666655444
No 143
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.28 E-value=1.3e-10 Score=123.01 Aligned_cols=154 Identities=16% Similarity=0.176 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 007604 47 MAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGL 126 (596)
Q Consensus 47 ~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~ 126 (596)
+.+.....++|.|+++ .|.++.+.+...+...++..++.++.|+++||+ |||+.+..+..+..++..... .
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~------ 284 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S------ 284 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h------
Confidence 3444455778888875 699999999999999999999999999999998 999999888777776654432 1
Q ss_pred CCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhh
Q 007604 127 KPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGN 206 (596)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~ 206 (596)
.. .....+++.|++.+...|...+...|..|+++ ++...+.++...++|.++||
T Consensus 285 -------------------~~-~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp 338 (381)
T PRK03633 285 -------------------QA-AMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGP 338 (381)
T ss_pred -------------------hH-HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 11 22345566677766778888898999988764 67777777888899999999
Q ss_pred hhhhhccccccchhhhHHHHHHHHHHHHH
Q 007604 207 TVLVYIQDDVGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 207 ~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (596)
.++|++.+..||++.|.+.+...+++.+.
T Consensus 339 ~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 339 SFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 99999999999999998877666555443
No 144
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.27 E-value=7.5e-11 Score=126.32 Aligned_cols=159 Identities=9% Similarity=-0.037 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 007604 49 YHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKP 128 (596)
Q Consensus 49 ~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 128 (596)
..++..++|.|+++.+|.++.+.+++.+.+.++..++.++.|++.||. ++++.+..+.++..++.++.....
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc-------
Confidence 345667889999888999999999999999999999999999999997 888888888887777776665432
Q ss_pred CCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhh
Q 007604 129 PPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTV 208 (596)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~ 208 (596)
+.....++.++.|++.+...+...+++.|.+|++. |++.+++++...++|..+||.+
T Consensus 311 -----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l 367 (417)
T PRK10489 311 -----------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAAL 367 (417)
T ss_pred -----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHH
Confidence 45556667778888888777778889999999875 9999999999999999999999
Q ss_pred hhhccccccchhhhHHHHHHHHHHHHHHHh
Q 007604 209 LVYIQDDVGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 209 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
.|++.+..|++..+++.++...+..++...
T Consensus 368 ~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 368 LGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 999999889888887766554443333333
No 145
>PRK12382 putative transporter; Provisional
Probab=99.26 E-value=9.6e-11 Score=124.34 Aligned_cols=160 Identities=9% Similarity=0.126 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007604 45 ERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLS 124 (596)
Q Consensus 45 ~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~ 124 (596)
....+..+..+.+.|+++ .|++ +.+.....+.++..++.++.|++.||+ ||||.+.++..+..++.++.....
T Consensus 228 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~--- 300 (392)
T PRK12382 228 QGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP--- 300 (392)
T ss_pred HHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc---
Confidence 344555666777888764 4554 345666677888889999999999998 999999998888888777665542
Q ss_pred CCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHH
Q 007604 125 GLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLL 204 (596)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l 204 (596)
+...+++..++.|++.+...+...+...|.+|+++ |++..++++...++|..+
T Consensus 301 ---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~i 353 (392)
T PRK12382 301 ---------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGV 353 (392)
T ss_pred ---------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHH
Confidence 45566677888899988888888888899998875 999999999999999999
Q ss_pred hhhhhhhccccccchhhhHHHHHHHHHHHHHHHh
Q 007604 205 GNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 205 ~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
+|.+.|++.+..||+..|.+.++..+++.+..+.
T Consensus 354 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 354 SGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999888776666655443
No 146
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.26 E-value=6.2e-10 Score=114.21 Aligned_cols=78 Identities=17% Similarity=-0.093 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccc----------
Q 007604 146 QLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDD---------- 215 (596)
Q Consensus 146 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~---------- 215 (596)
+...+.++.+++|.|.+...+++.+++++..|+++ +.+..++.+.+..+|..++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~ 82 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVA 82 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhh
Confidence 67788899999999999999999999999999886 89999999999999999999999977632
Q ss_pred ------ccchhhhHHHHHHH
Q 007604 216 ------VGWALGYGLPALGL 229 (596)
Q Consensus 216 ------~g~~~~f~~~~~~~ 229 (596)
..|+++|++.++..
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~ 102 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGAL 102 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHH
Confidence 36889988555443
No 147
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.25 E-value=1e-10 Score=123.98 Aligned_cols=160 Identities=14% Similarity=0.064 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
+..++....+.....+++..+++.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 318 (405)
T TIGR00891 240 FVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLI 318 (405)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHH
Confidence 33344444444555566778899999999999999999999999999999999999999998 99999988876553322
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
+...... .+...+.++.++.++..+...+..++++.|.+|+++ |++.+++.
T Consensus 319 ~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~ 369 (405)
T TIGR00891 319 IPVFAIG-----------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFT 369 (405)
T ss_pred HHHHHhC-----------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHH
Confidence 2221111 134445555566677777777888899999999886 99999999
Q ss_pred HHHHHHHHHHhhhhhhhcccccc-chhhhHH
Q 007604 195 MFSIFFGTLLGNTVLVYIQDDVG-WALGYGL 224 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~ 224 (596)
+...++|..++|.+.|++.+..| |+..+..
T Consensus 370 ~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 370 YQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 99999999999999999999888 8766544
No 148
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.25 E-value=7.9e-11 Score=127.65 Aligned_cols=172 Identities=11% Similarity=0.018 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh-cchhHHHHHHH--HH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY-LGRYWTFVIAF--FF 109 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~-~Grk~~~~~~~--~~ 109 (596)
+.++..++..++..+.++....+++.|++ ++|++..+.+.+.+...++..++.+++|+++||. .++|+...++. ++
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 44566666666777777888889999986 4799999999999999999999999999999984 24444444333 32
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhh
Q 007604 110 YLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLS 189 (596)
Q Consensus 110 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (596)
..++.+++.... +...+++.+++.|++.+...+...+++.|.+|+++ +++
T Consensus 320 ~~l~~ll~~~~~------------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~ 369 (455)
T TIGR00892 320 NGLTHLLCALAG------------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSS 369 (455)
T ss_pred HHHHHHHHHHhc------------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------Hhh
Confidence 333333333332 56667778889999999999999999999999875 999
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhccccc-cchhhhHHHHHHHHHHHHH
Q 007604 190 FFNWWMFSIFFGTLLGNTVLVYIQDDV-GWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 190 ~~~~~~~~~~ig~~l~~~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~ 235 (596)
.+++++...++|..+||.++|++.+.. +|+..|++.++..+++.+.
T Consensus 370 ~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 370 AVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 999999999999999999999998877 4999999888766555443
No 149
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.25 E-value=2.8e-10 Score=121.29 Aligned_cols=176 Identities=11% Similarity=-0.033 Sum_probs=129.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHH-HHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFV-IAFFFYL 111 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~-~~~~~~~ 111 (596)
|.++...+..++....+++...++|.|++ ++|.+..+.+.+.+...++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 44566666677777888888999999986 5899999999999999999999999999999998 9988764 3333333
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++.+.+...... ...+....++..++.|++.+...+. .+...|..|+ + |+++.
T Consensus 300 ~~~~~l~~~~~~-------------------~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~-~------~g~~~ 352 (402)
T TIGR00897 300 IFTLALYYIPQH-------------------FGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAPK-H------KGAAM 352 (402)
T ss_pred HHHHHHHHHHHc-------------------cCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCcc-h------hHHHH
Confidence 333332222100 0013445556677778777765553 4556666553 3 99999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHH
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 237 (596)
++.+...++|..++|.+.+++.+..||...+++.+++.+++.+...
T Consensus 353 g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 353 SVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999989999999988877666555443
No 150
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.24 E-value=1.6e-10 Score=126.55 Aligned_cols=149 Identities=13% Similarity=0.048 Sum_probs=115.7
Q ss_pred HHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 007604 51 GISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPP 130 (596)
Q Consensus 51 ~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 130 (596)
.+..++|.|+++.+|++..+.+.+.+...++..++.+++|+++||+ |||+++.++..+..++.++......
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~-------- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIGG-------- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhccc--------
Confidence 4567899999889999999999999999999999999999999998 9999988877665555444332210
Q ss_pred CCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhh
Q 007604 131 CNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLV 210 (596)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~ 210 (596)
.+...+.+..++.+....+..+..++++.|.+|+++ |++.+++++...++|..+||.+.|
T Consensus 364 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g 423 (496)
T PRK03893 364 --------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGA 423 (496)
T ss_pred --------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHH
Confidence 133333333444333333445677888999999876 999999999999999999999999
Q ss_pred hccccccchhhhHHHHHH
Q 007604 211 YIQDDVGWALGYGLPALG 228 (596)
Q Consensus 211 ~l~~~~g~~~~f~~~~~~ 228 (596)
++.+.+||+..+.+.+..
T Consensus 424 ~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 424 LIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHhccCChHHHHHHHHHH
Confidence 999999999887655443
No 151
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.21 E-value=5.4e-10 Score=122.18 Aligned_cols=180 Identities=10% Similarity=0.020 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHH-HHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVT-NWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
+.+....++.....+....+.+.|+.+.+|++..+.+.+.. ...++..++.+++|+++||+ |||+.+.++.++..++.
T Consensus 225 ~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 225 WLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 33333334445555566677888888889999999999875 55689999999999999998 99998877666555544
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
+......... .+...+.+..++..+..|...++..++..+..+++. +++.+++.
T Consensus 304 l~~~~l~~~~--------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~ 357 (491)
T PRK11010 304 AGYWLLSITD--------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALL 357 (491)
T ss_pred HHHHHHHhcc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHH
Confidence 3322211000 133334444555555555555777888899999886 78889999
Q ss_pred HHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCc
Q 007604 195 MFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPF 242 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (596)
+...++|..+++.+.|++.+..||+..|.+.+++.+++++.....+++
T Consensus 358 ~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 358 SALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999888899999999999999998888777777666555443
No 152
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.20 E-value=4.9e-10 Score=114.97 Aligned_cols=162 Identities=16% Similarity=0.066 Sum_probs=124.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDK--LHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
+..+...+..++....--++..|++.|+.+. +|+++.+.+...+.+..+..++.++++++.||+ |+||++.++..+.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 3445444444444445557788999999854 799999999999999999999999999999998 9999998888777
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
+++.++..... +.. ...+.++.|++.+...|...+...+.+|++. +++
T Consensus 219 ~~~~~l~~~~~------------------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~a 266 (310)
T TIGR01272 219 VLLSIGAALTH------------------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQG 266 (310)
T ss_pred HHHHHHHHHcC------------------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhh
Confidence 77665544321 221 2235557899999999999999999988763 333
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHH
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALG 228 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~ 228 (596)
.++. ....+|+++.|.+.|.+.|..|.+.+|++..++
T Consensus 267 sai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 267 SGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 3443 566799999999999999988988888766544
No 153
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=6.6e-10 Score=114.93 Aligned_cols=178 Identities=12% Similarity=0.102 Sum_probs=145.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+.++......++...+.|...+++..++++..|++....++++..|.++..+|.+++|+++|| +.|+++.....+.++
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 457777778888888889999999999999999999999999999999999999999999998 888888888777777
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
..+.+.+..+ +.....+..++.|++.+........-.++..|++ +..+.+
T Consensus 289 ~~l~l~~~~~-----------------------~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~-------~~~a~s 338 (394)
T COG2814 289 ALLALTFTGA-----------------------SPALALALLFLWGFAFSPALQGLQTRLARLAPDA-------ADLAGS 338 (394)
T ss_pred HHHHHHHhcc-----------------------hHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCc-------hHHHHH
Confidence 7766665531 4445555556677776666666666666655554 899999
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCc
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPF 242 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (596)
++....|+|..+|..++|.+.+++|+....+.+++..++++++.+...++
T Consensus 339 l~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 339 LNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999998888887776654443
No 154
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.20 E-value=6.4e-09 Score=111.30 Aligned_cols=359 Identities=13% Similarity=0.129 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhh-hhhHHHHH----HHHHHHhhhhhHHHhhhhcchhHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVK-SANNVTNW----GGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF 109 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~-~~~~~~~~----~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 109 (596)
...+.+...+.....+........+.....+.+... .+...... .+...+.+++.|.++||+ |||..+...++.
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHH
Confidence 333444444443333434455555655555443332 22333333 567888899999999999 999999999888
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHH--hccCcccchhhhhhccCCCCChhhhhhh
Q 007604 110 YLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAV--GTGGTKPNILTIAADQFDEFEPKEKAHK 187 (596)
Q Consensus 110 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~--g~g~~~~~~~~~~~~~~~~~~~~~~~~r 187 (596)
..+..+...+. . +.+++ +.++ +.+.......++++|....++ |
T Consensus 102 ~~l~~~~~~~~-------------------------~-~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R 146 (463)
T KOG2816|consen 102 TILPALCLLFQ-------------------------G-YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE------R 146 (463)
T ss_pred HHHhHHHHHHH-------------------------H-HHHhh---hcccccchhhhhhhhhhheeeccchhH------H
Confidence 88777766654 2 11222 3222 233445677788999998886 9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCC-hhHHHHHHHHHHHHh
Q 007604 188 LSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRHKKPAGS-PFTRMAKVIVAAIRK 266 (596)
Q Consensus 188 ~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 266 (596)
...+++.+.....+..++|.+++++.+..|...+|+++++..++..+..+...|+...++.+.. +.
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~------------- 213 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATL------------- 213 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccc-------------
Confidence 9999999999999999999999999999999999999998887777666555444332221110 00
Q ss_pred cCCCCCCCchhhhhhhhHHhhhcCcccccCCcchhhhhhhhhhcCCCCCcccccchhhhhhhhHHhHHHHHHHhhhhhhh
Q 007604 267 RNVPLPIDPQELYELDLEYYAQRGKYRIGSTQNLRFFNKAAVKTGATNPWILCSVSQVEETTQMLAMIPILVATFVPSTM 346 (596)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~~ 346 (596)
....+......+. -| .+....+ .+..|..+.++...+ ......
T Consensus 214 ----~~~~~~~~~~~~~-------------------~~----------~~~~~~~--~~~~r~~l~l~l~~~--~~~~~~ 256 (463)
T KOG2816|consen 214 ----RELTPGSLDSSHV-------------------AD----------AFQSLTK--VGPDRLLLLLLLVAF--LSSLPE 256 (463)
T ss_pred ----cccCCCcccchhh-------------------hh----------hhhhhcc--cCCCccchHHHHHHH--HHHHHH
Confidence 0000000000000 00 0000000 122233333222211 111111
Q ss_pred hhccc---ceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHh-HHHHHhhhcccCCCCCCChhHHHHHHHHHH
Q 007604 347 LAQIN---TLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYD-RCFVRITRRWTKNPRGITLLQRMGIGLVIH 422 (596)
Q Consensus 347 ~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~-~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~ 422 (596)
..... .++......-+.. .-+.+.........+...+.- .+...++.| +.+.+|+..-
T Consensus 257 ~~~~~~~~~~yl~~~f~w~~~-------~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----------~~i~lGl~~~ 318 (463)
T KOG2816|consen 257 AGGASDVLLLYLKAKFGWNKK-------EFSDLLSLVSILGIISQLLLLPLLSSILGEK-----------RLISLGLLSE 318 (463)
T ss_pred hcCceeEEEEEEeeecCcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----------hHhhHHHHHH
Confidence 11111 1222211111111 111122222222222222111 222222333 3477788888
Q ss_pred HHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHh
Q 007604 423 IIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLG 502 (596)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ 502 (596)
.+...+.++.+ +. |.............+..|...+++...+.++.+|...++......
T Consensus 319 ~~~~~~~af~~---------------------~~-w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~ 376 (463)
T KOG2816|consen 319 FLQLLLFAFAT---------------------ET-WMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEG 376 (463)
T ss_pred HHHHHHHHHhc---------------------cc-hhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHH
Confidence 88888888764 22 222233445555668889999999999999999999999999999
Q ss_pred HHHHHHhHHHhhhhccc
Q 007604 503 VGNFLSSFLLSTVSDIT 519 (596)
Q Consensus 503 ig~~lg~~~~~~i~~~~ 519 (596)
+.+.+++.+.+.+...+
T Consensus 377 l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 377 LSGVVSPALYGNIFALT 393 (463)
T ss_pred HhhhhhHHHHHHHHHHH
Confidence 99999999999887665
No 155
>PRK15075 citrate-proton symporter; Provisional
Probab=99.19 E-value=3.1e-10 Score=122.28 Aligned_cols=153 Identities=10% Similarity=0.047 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHH-HH
Q 007604 39 VVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMI-VL 117 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~-~~ 117 (596)
+...++....++.+..++|.|+++.+|++..+.++....+.++..++.+++|+++||+ |||++++++.++..+... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3444455667778889999999988999999999888889999999999999999998 999998876554433221 11
Q ss_pred HHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHH
Q 007604 118 ALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFS 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (596)
..... ..+.....+..++.+++.+...+...++..|.+|++. |+++.++.+..
T Consensus 323 ~~~~~---------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~ 375 (434)
T PRK15075 323 SWLVA---------------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSL 375 (434)
T ss_pred HHHHc---------------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHH
Confidence 11110 0022223333445566666667777788999999986 99999985444
Q ss_pred H-HHHHHHhhhhhhhccccccch
Q 007604 198 I-FFGTLLGNTVLVYIQDDVGWA 219 (596)
Q Consensus 198 ~-~ig~~l~~~~~~~l~~~~g~~ 219 (596)
. .+++.++|.+.+++.+..|++
T Consensus 376 ~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 376 ATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHhhhHHHHHHHHHHhcCCc
Confidence 4 446778999999998887754
No 156
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.18 E-value=4.1e-10 Score=115.35 Aligned_cols=185 Identities=14% Similarity=0.033 Sum_probs=148.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
.+..|.+++..+..--++-+...+++.|+++++|.++.+++.....+.+...+..+.+|+|+||+ |.+|++.+....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 35678888888877778888999999999999999999999999999999999999999999998 99999998888888
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++..+.....+.... ..+...+++..+.+++..|.-...+..++...+|++ -+...
T Consensus 296 ~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~ 351 (417)
T COG2223 296 LAAALLSLFLTGFGH-----------------GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVT 351 (417)
T ss_pred HHHHHHHcccccccc-----------------CcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHH
Confidence 888777665311100 124445555555667777777777888888888875 78899
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHHHHHHHHHHHhcCC
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAIAIFLAGTP 241 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~ 241 (596)
++...+.++|+..-|...+...+..| +..+|++.....+.+.++.+....
T Consensus 352 G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 352 GIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred HHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888988888888777 899999888777766665555443
No 157
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.17 E-value=9.9e-10 Score=118.65 Aligned_cols=185 Identities=12% Similarity=0.100 Sum_probs=149.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchh--HHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRY--WTFVIAFF 108 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk--~~~~~~~~ 108 (596)
+.|.+...++..++.+-+...+......|.++.+|++..+...+.....+.+.+|+++.|++.||+ |.| ++++++++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 345666667777777778888889999999999999999999999999999999999999999998 998 88888877
Q ss_pred HHHHHHHHHHH--HhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhh
Q 007604 109 FYLMGMIVLAL--SVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAH 186 (596)
Q Consensus 109 ~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 186 (596)
+..+..+...+ ..+. .+..+.+.+++.-++.|+..|..++..-++.+++.|+++
T Consensus 358 ~~~~i~~~g~~G~~~~~------------------~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------ 413 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSF------------------FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------ 413 (477)
T ss_pred HHHHHHHHHHHHhhhcc------------------cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------
Confidence 66332222222 1100 011256667888889999999999999999999999986
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHHHHHHHHHHHhcC
Q 007604 187 KLSFFNWWMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAIAIFLAGT 240 (596)
Q Consensus 187 r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 240 (596)
.+..|+++.......+.+||.+.|.+.+..| .|..+....++.++++++++..+
T Consensus 414 e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 414 EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 8999999999999999999999999988876 88888877777777777665543
No 158
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.15 E-value=8.6e-10 Score=118.77 Aligned_cols=175 Identities=8% Similarity=-0.071 Sum_probs=112.0
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEV-FERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 35 ~~~~~~~~~-~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
.+.+....+ +....+|+...++|.|+.+++|++..+.+...+...++..++.++.|+++||+ |||+.+.++.++..+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 322 (432)
T PRK10406 244 AFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALF 322 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 343333333 34677888999999999989999999999888888888889999999999998 9999887765544333
Q ss_pred HHHHHH-HhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 114 MIVLAL-SVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 114 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
...... .... .+....+....+..++.+...+....+.+|.+|++. |+++.+
T Consensus 323 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g 375 (432)
T PRK10406 323 TVPILSALQNV---------------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVG 375 (432)
T ss_pred HHHHHHHHHcC---------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhh
Confidence 222211 1100 012211111122222333334556788899999987 999999
Q ss_pred HHHHHHHH-HHHHhhhhhhhcccccc-chhhhHHHHHHHHHHHHHHHh
Q 007604 193 WWMFSIFF-GTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 193 ~~~~~~~i-g~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 238 (596)
+.+...++ ++...|.+.+++. ..| |...+++.++..+++.+..+.
T Consensus 376 ~~~~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 376 LSYAVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 97765554 3445777777664 345 555666555555555544443
No 159
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.15 E-value=7e-10 Score=106.91 Aligned_cols=167 Identities=13% Similarity=0.062 Sum_probs=133.9
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHH
Q 007604 29 RGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFF 108 (596)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 108 (596)
+...+.+|.+...+++.+...+=....-+.++++.+|+|+..++.+.+.......+..++.|.++|++ ||+-..+.+.+
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~ 338 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASAC 338 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHH
Confidence 34446788888888887777777777888999999999999999999999999999999999999999 99988877765
Q ss_pred H-HHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhh
Q 007604 109 F-YLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHK 187 (596)
Q Consensus 109 ~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 187 (596)
+ ...+-..+.++. ..=+.+..++|+.......+.++.++...|+++ .
T Consensus 339 ~~tl~~H~~l~Ft~--------------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE~q------L 386 (459)
T KOG4686|consen 339 ILTLLGHSGLFFTF--------------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------L 386 (459)
T ss_pred HHHHHHhhhHHhhh--------------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------h
Confidence 5 444455555542 112456667888888777778899999999986 9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhcccccc---chhhhHHHHHH
Q 007604 188 LSFFNWWMFSIFFGTLLGNTVLVYIQDDVG---WALGYGLPALG 228 (596)
Q Consensus 188 ~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g---~~~~f~~~~~~ 228 (596)
|++++..+...|+|-++-|++.|.+.+..| |--+|.+....
T Consensus 387 GTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~ 430 (459)
T KOG4686|consen 387 GTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGL 430 (459)
T ss_pred cchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHH
Confidence 999999999999999999999999988755 44455554443
No 160
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.15 E-value=7.4e-10 Score=119.81 Aligned_cols=168 Identities=9% Similarity=-0.051 Sum_probs=117.7
Q ss_pred HHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 007604 52 ISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPC 131 (596)
Q Consensus 52 ~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (596)
+..+.+.+ .+++|++..+.++......++..++.+++|+++||+ |||+.+.+++++..++.+++.........
T Consensus 303 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 375 (481)
T TIGR00879 303 IMYYSPTI-FENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFVT----- 375 (481)
T ss_pred hHHHHHHH-HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhcccC-----
Confidence 34444444 457899998888999999999999999999999998 99999999988887777666532110000
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhh
Q 007604 132 NDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVY 211 (596)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~ 211 (596)
..+...+...+....+..+.......+....+..|.+|+++ |+++.++.+...++|.+++|.+.++
T Consensus 376 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~~ 441 (481)
T TIGR00879 376 --------GSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFPT 441 (481)
T ss_pred --------CcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000012222222222222222334667778899999886 9999999999999999999999999
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHHhcC
Q 007604 212 IQDDVGWALGYGLPALGLAIAIAIFLAGT 240 (596)
Q Consensus 212 l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 240 (596)
+.+..+|++.|++.+++.+++.++.++..
T Consensus 442 ~~~~~~~~~~f~~~~~~~~~~~i~~~~~~ 470 (481)
T TIGR00879 442 MLESIGVGGVFIFFGGLNVLGLIFVYFFL 470 (481)
T ss_pred HHHhcCccceehhHHHHHHHHHHHHheec
Confidence 98888999999887766555555444433
No 161
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.14 E-value=2.4e-10 Score=119.23 Aligned_cols=154 Identities=12% Similarity=0.107 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGIS-SNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
.++..+...++....+++.. .+.|.|.++.+|.++.+.+.+.....++..++.++.|++.||+ |||+.+..+..+..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 211 LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHH
Confidence 44555555555566666565 7788888877999999999999999999999999999999998 999999888777666
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+..+.....+ +...+++..++.|++.+...+...+++.|.+|+++ |++..+
T Consensus 290 ~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~ 340 (365)
T TIGR00900 290 AILVVGLTPP-----------------------NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFG 340 (365)
T ss_pred HHHHHHhhch-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHH
Confidence 6665554420 25567778888999999999999999999999875 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccccc
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVG 217 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g 217 (596)
+.+...++|..++|.+.|++.+..|
T Consensus 341 ~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 341 AQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999877543
No 162
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.14 E-value=6.9e-10 Score=119.74 Aligned_cols=177 Identities=13% Similarity=0.083 Sum_probs=121.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+.++...+..++.....+++..++|.|+++..|+++.+.++....+.++..++.+++|+++||+ |+++....+..+..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHH
Confidence 3466666666777777788899999999988999999999999999999999999999999998 755433333322221
Q ss_pred ---HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhh
Q 007604 113 ---GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLS 189 (596)
Q Consensus 113 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (596)
+.+....... .+........++.|++..+..........|.+|+++ |++
T Consensus 330 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 381 (438)
T TIGR00712 330 VTIAVIVYWMNPA----------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGT 381 (438)
T ss_pred HHHHHHHHHhcCC----------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eee
Confidence 1111111100 022223333444444433322233346778899876 999
Q ss_pred hHHHHHHHHHHHH-HHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHh
Q 007604 190 FFNWWMFSIFFGT-LLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 190 ~~~~~~~~~~ig~-~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
+.++.+...++|+ ++||.+.|++.+..||...|++.++..+++.+..+.
T Consensus 382 ~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 382 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred ehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 9999988888875 689999999999889999988777665555544443
No 163
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.14 E-value=9.5e-09 Score=113.09 Aligned_cols=204 Identities=16% Similarity=0.166 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
+..+.....+......+.+.....-+++.++++..+.|++.+.+-++..+...+..+++-|. -|-|.+-++.+++++|.
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGS 176 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHH
Confidence 34344444444444447777788889999999999999999999999999999999999997 88899999999999999
Q ss_pred HHHHHHhhccCC-------------CC------CCCC-------CCCCcccc-ccccc-hhHHHHHHHHHHHHhccCccc
Q 007604 115 IVLALSVSLSGL-------------KP------PPCN-------DINSQDCR-KASTL-QLGTFFAALYTLAVGTGGTKP 166 (596)
Q Consensus 115 ~~~~~~~~~~~~-------------~~------~~~~-------~~~~~~~~-~~~~~-~~~~~~~~~~l~g~g~g~~~~ 166 (596)
++.++-..+... .+ ..|+ +.+....+ ..++. -+.+++++.++.|+|.....+
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 998765221100 00 0011 11111111 12222 233677889999999999999
Q ss_pred chhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccc------------------ccc-chhhhHHHHH
Q 007604 167 NILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQD------------------DVG-WALGYGLPAL 227 (596)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~------------------~~g-~~~~f~~~~~ 227 (596)
...+|+=|...+++ -...+++.+.+..+|.++|.+++++... ..| |+..|++++.
T Consensus 257 lGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~ 330 (735)
T KOG3626|consen 257 LGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGA 330 (735)
T ss_pred CCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHH
Confidence 99999999888876 7888899999999999999988886521 122 8888888887
Q ss_pred HHHHHHHHHHhcCCceec
Q 007604 228 GLAIAIAIFLAGTPFYRH 245 (596)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~ 245 (596)
+.++..+.+++.++..++
T Consensus 331 ~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 331 LLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHhCcccCcc
Confidence 777777777776665543
No 164
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.13 E-value=1.8e-09 Score=114.23 Aligned_cols=167 Identities=5% Similarity=-0.091 Sum_probs=129.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.++...+..++....+.....+++.|++ +.|.++.+.+.+.+...++..+..++.|++.||+ |+|+.+.++.++..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 34555555555555666667778888986 5899999999999988899999999999999998 999999999888888
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.++....+ +.+.+++..++.|++.+...+....+..+. ++++ +++..+
T Consensus 283 ~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~ 331 (382)
T PRK11128 283 RWGLMGSTT------------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQA 331 (382)
T ss_pred HHHHHHhhh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHH
Confidence 776665543 666777888899999888888888888776 4433 677788
Q ss_pred HHH-HHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHH
Q 007604 193 WWM-FSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAI 233 (596)
Q Consensus 193 ~~~-~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~ 233 (596)
.+. ....+|..+||.++|++.+..|+. .|+..++..++++
T Consensus 332 ~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 332 LYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHH
Confidence 765 556778899999999999988874 5555554444443
No 165
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.12 E-value=1.2e-09 Score=119.05 Aligned_cols=174 Identities=9% Similarity=-0.026 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhH-----HHH--HH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYW-----TFV--IA 106 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~-----~~~--~~ 106 (596)
..|.+.+..++.....+....++|.|+.+++|++..+++.+.+.+.++..++.+++|+++||+ |||+ ... +.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~ 331 (476)
T PLN00028 253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIV 331 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHH
Confidence 345555554455555566778899999989999999999999999999999999999999998 8762 212 22
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhh
Q 007604 107 FFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAH 186 (596)
Q Consensus 107 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 186 (596)
..+..++.++..... +.....+..++.+++.+...+...++..+..|+ .
T Consensus 332 ~~l~~i~~~~~~~~~------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~------ 380 (476)
T PLN00028 332 QTLGGVFCIWLGRAN------------------------SLGAAIVVMILFSIFVQAACGATFGIVPFVSRR-S------ 380 (476)
T ss_pred HHHHHHHHHHhcccc------------------------hHHHHHHHHHHHHHHHHHhhhhhcccCcccChh-h------
Confidence 222222222221111 333344444555555555555556666666553 3
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcC
Q 007604 187 KLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGT 240 (596)
Q Consensus 187 r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 240 (596)
|+...++.+...++|+.++|.+.+ ..+..+|+..|++.++..+++.++.++.+
T Consensus 381 ~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 381 LGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred chhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 899999887777777777776544 22334699999888877776666655543
No 166
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.11 E-value=6.4e-10 Score=116.50 Aligned_cols=162 Identities=18% Similarity=0.213 Sum_probs=118.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHH--H
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF--Y 110 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~--~ 110 (596)
+.++.+.+..++.....+++..+++.|+.+.+|.+..+.+...+.+.++..++.+++|+++||..+||+........ .
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 34666666677777777788889999999999999999999999999999999999999999862444433222111 1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++....... + ..+.....+..++.|+..+...+....+..|.+|++. |+++
T Consensus 296 ~~~~~~~~~~---~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 347 (379)
T TIGR00881 296 IVSLLVYWLN---P-------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTA 347 (379)
T ss_pred HHHHHHHhcC---c-------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHH
Confidence 1111111110 0 0133344455556666555556666778899999886 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccchhhh
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVGWALGY 222 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f 222 (596)
.++.+...++|..++|.+.|++.+..||+..|
T Consensus 348 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 348 AGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999999998764
No 167
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.11 E-value=1.4e-09 Score=118.27 Aligned_cols=178 Identities=14% Similarity=0.022 Sum_probs=123.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHH--------
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTF-------- 103 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~-------- 103 (596)
++.++...+..++....++....++|.|+.+.+|.+..+.++..+...++..++.+++|+++||+ ++|+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 35678888888888888999999999999999999999999999999999999999999999997 654321
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhh
Q 007604 104 VIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKE 183 (596)
Q Consensus 104 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 183 (596)
..+......+..+..... .. .+.....+...+.+.+.++..+.......|..|. .
T Consensus 339 ~~~~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~--- 393 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPY-LS--------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F--- 393 (465)
T ss_pred HHHHHHHHHHHHHHHHHH-cC--------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H---
Confidence 111111111111111110 00 0222333344444555555555555566676665 3
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhhhhhhhccccc---cchhhhHHHHHHHHHHHHHHHh
Q 007604 184 KAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDV---GWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 184 ~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~---g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
++...++.+...++|+.++|.+.|++.+.. +|+..|.+.++..+++.+....
T Consensus 394 ---~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 394 ---LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 899999999999999999999999887643 3888888887766666555443
No 168
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.11 E-value=2.8e-09 Score=112.83 Aligned_cols=172 Identities=9% Similarity=-0.009 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
.+......++.....+....+++.|+.+.+|.++.+.+...+...++..++.++.|++.||+ |+|+.+..+..+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 34444444444445555566778888888999999999999999999999999999999998 99999998888877776
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
++.....+ +.....+..++.++|.++..+.......+..++++ .++.. ..
T Consensus 280 ~~~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~ 329 (382)
T PRK10091 280 LMLFFFGG-----------------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGE-----LLGAA--GG 329 (382)
T ss_pred HHHHHHHh-----------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcch-----HHHHH--HH
Confidence 55543221 22333444445555554444433433333333321 14443 23
Q ss_pred HHHHHHHHHHhhhhhhhcccc-ccchhhhHHHHHHHHHHHHHHH
Q 007604 195 MFSIFFGTLLGNTVLVYIQDD-VGWALGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~l~~~-~g~~~~f~~~~~~~~~~~~~~~ 237 (596)
+...++|..+||.++|++.+. .+|+..+.+.++..++.+..+.
T Consensus 330 ~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 330 QIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 566789999999999998874 6799999888766555554443
No 169
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.10 E-value=1.5e-09 Score=116.05 Aligned_cols=165 Identities=9% Similarity=-0.023 Sum_probs=116.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHH-HHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDK-LHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTF-VIAFFFY 110 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~-~~~~~~~ 110 (596)
+.++...+..++....++++..++|.|+++. .|.+..+++.......++..++.+++|+++||+ |||+.. .....+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence 3466677777778888889999999999863 477888999999999999999999999999998 877643 3333333
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++..+ .... . +....+.+..+.++|.....+.......|.+|+++ |+.+
T Consensus 321 ~~~~~~-~~~~--~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a 370 (412)
T TIGR02332 321 AAGWLL-ASAT--D---------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIA 370 (412)
T ss_pred HHHHHH-HHhc--C---------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHH
Confidence 333222 1111 0 11112222223333333333444455567777775 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHH
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALG 228 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~ 228 (596)
+++.+...++|++++|.+.|.+.+..| |+..|++.++.
T Consensus 371 ~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 371 IAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999999998775 99998876654
No 170
>PRK10504 putative transporter; Provisional
Probab=99.10 E-value=2.3e-09 Score=116.75 Aligned_cols=157 Identities=9% Similarity=-0.048 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
.+...+...++..+++.......|.|++..+|.++.+.+++.....++..++.++.|+++||+ |||+++.++..+..++
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 262 TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALV 340 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 345555556666666655666788888888999999999999988888888999999999998 9999999888877777
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
.++...... ..+...+.+..++.|++.+...+....+..+.+|+++ ++.++++
T Consensus 341 ~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~ 393 (471)
T PRK10504 341 SLLFMLVAL---------------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSL 393 (471)
T ss_pred HHHHHhccc---------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHH
Confidence 665554310 0123334455667788888888888899999999886 9999999
Q ss_pred HHHHHHHHHHHhhhhhhhccccccc
Q 007604 194 WMFSIFFGTLLGNTVLVYIQDDVGW 218 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~~~g~ 218 (596)
++....+|..+|+.++|.+.+..|+
T Consensus 394 ~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 394 LSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999887665554
No 171
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.10 E-value=4.5e-08 Score=105.13 Aligned_cols=161 Identities=12% Similarity=0.050 Sum_probs=115.9
Q ss_pred HHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh--cc--hhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 007604 56 LVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY--LG--RYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPC 131 (596)
Q Consensus 56 l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~--~G--rk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (596)
...|+++++|+++++.....+...+-. ..-++.|.++|-+ +| ||+-++++.++..++.+.++.....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~-------- 82 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS-------- 82 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc--------
Confidence 445788999999999888777665544 5567779999987 34 4455555666665555555443210
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhh
Q 007604 132 NDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVY 211 (596)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~ 211 (596)
..+.....+..++..+|......++-++..|....+. . .|+...++.+....+|++++..+.|.
T Consensus 83 ------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p-~---~~g~lqS~~~~~~~~G~lv~~~l~G~ 146 (433)
T PF03092_consen 83 ------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREP-E---SRGDLQSFVWGVRSVGSLVGSLLSGP 146 (433)
T ss_pred ------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC-c---hhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 0134445566677889999999999999999987664 1 27888888888999999999999999
Q ss_pred ccccccchhhhHHHHHHHHHHHHHHHhcCC
Q 007604 212 IQDDVGWALGYGLPALGLAIAIAIFLAGTP 241 (596)
Q Consensus 212 l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (596)
+.+..+++..|.+.+++..+..+..+...+
T Consensus 147 l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 147 LLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 999999999999888765555444443333
No 172
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.09 E-value=1.4e-09 Score=115.67 Aligned_cols=169 Identities=12% Similarity=0.034 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKL---HHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
++..++..++....+.....+.+.|+.+.+ +.+..+.+.+.+...+...++.++.|++.||+ |||+.+.++.++..
T Consensus 217 ~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~ 295 (396)
T TIGR00882 217 FWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHH
Confidence 344444444444444445566788887665 45566778888888888999999999999998 99999999888888
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++..+...+. +.+.+++..++.|++.+........+..+..|++. +++..
T Consensus 296 l~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~ 345 (396)
T TIGR00882 296 VRIIGSSFAT------------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIY 345 (396)
T ss_pred HHHHHHHhcC------------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEee
Confidence 7776655442 55666777888888876655555666777777664 67766
Q ss_pred HH-HHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHH
Q 007604 192 NW-WMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIA 234 (596)
Q Consensus 192 ~~-~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 234 (596)
+. ++....+|..+++.++|++.+..||+.+|.+.++..++..+
T Consensus 346 ~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 346 LIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 65 67788999999999999999989999999887766554443
No 173
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.09 E-value=6.8e-09 Score=110.74 Aligned_cols=170 Identities=10% Similarity=-0.076 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
.++...+..++.....+......|.|+.+.+|+++.+.+.......++..++.++.|+++||+ |||+.+.++.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 455555554555555556666788888888999999999888878888999999999999998 9999999998888887
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
.++........ +.+...+.++.++.|+|.+...+..........| ++ |++..+.
T Consensus 295 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~ 348 (406)
T PRK15402 295 LLLAALATVIS-------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-VS------KGTVSAA 348 (406)
T ss_pred HHHHHHHHHcc-------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-cc------ccHHHHH
Confidence 77766542100 1144456677888888888877766665544433 43 9999999
Q ss_pred HHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHH
Q 007604 194 WMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLA 230 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~ 230 (596)
+++...+|..+|+.+.+++.+..++....+..++..+
T Consensus 349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~ 385 (406)
T PRK15402 349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGL 385 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHH
Confidence 9999999999999999999887776655555444333
No 174
>TIGR00895 2A0115 benzoate transport.
Probab=99.08 E-value=1.4e-09 Score=114.81 Aligned_cols=147 Identities=10% Similarity=0.022 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
..+.+.+..++....++.+..++| ++.+++|.+..+.+...+...++..++.+++|+++||+ |||+.+....+....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 328 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHH
Confidence 344445555566677777777888 66678899999999999999999999999999999998 9995554443333333
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
.++..... +....++..++.|++.+...+...++..|.+|+++ |+++.++
T Consensus 329 ~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~ 378 (398)
T TIGR00895 329 VLVGSTLF------------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGW 378 (398)
T ss_pred HHHHHHhh------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHH
Confidence 33222111 44556677788899999999999999999999886 9999999
Q ss_pred HHHHHHHHHHHhhhhhhhc
Q 007604 194 WMFSIFFGTLLGNTVLVYI 212 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l 212 (596)
.+....+|..+||.+.|++
T Consensus 379 ~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 379 AIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhHHhc
Confidence 9999999999999998875
No 175
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.08 E-value=4.2e-09 Score=113.00 Aligned_cols=150 Identities=15% Similarity=-0.032 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 007604 46 RMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSG 125 (596)
Q Consensus 46 ~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~ 125 (596)
....+.+..++|.|+++ .|.++.+.+.+.+...++..++.++.|+++||+ |||+++..+.++..++.++......
T Consensus 244 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 318 (426)
T PRK12307 244 FGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIPQ--- 318 (426)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHcc---
Confidence 33444567788988875 699999999999999999999999999999998 9999998888776665544433210
Q ss_pred CCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHh
Q 007604 126 LKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLG 205 (596)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~ 205 (596)
.....+.+..+..+.+..+..+..+.++.|.+|++. |+++.++.+...++|+.++
T Consensus 319 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~g 373 (426)
T PRK12307 319 -------------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFN 373 (426)
T ss_pred -------------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHH
Confidence 012111122222233333445667788899999886 9999999999999999999
Q ss_pred hhhhhhccccccchhhhHHH
Q 007604 206 NTVLVYIQDDVGWALGYGLP 225 (596)
Q Consensus 206 ~~~~~~l~~~~g~~~~f~~~ 225 (596)
|.+.|++.+..|+....++.
T Consensus 374 p~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 374 SMAATWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHHHHHHcccHHHHHHHH
Confidence 99999999888866544333
No 176
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.07 E-value=1.7e-11 Score=134.12 Aligned_cols=199 Identities=16% Similarity=0.143 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Q 007604 40 VYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLAL 119 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~ 119 (596)
+..++. ....+.+.....-+++.++++.++.|++.+.+-++..+..++..++++|. -|-|-+-++.+++++|.++.++
T Consensus 10 ~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 10 LLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc
Confidence 333344 66667777777788999999999999999999999999999999999997 8888888999999999999886
Q ss_pred HhhccCCCC-C-----CCCC-CCCccc-------------------cccccchhHHHHHHHHHHHHhccCcccchhhhhh
Q 007604 120 SVSLSGLKP-P-----PCND-INSQDC-------------------RKASTLQLGTFFAALYTLAVGTGGTKPNILTIAA 173 (596)
Q Consensus 120 ~~~~~~~~~-~-----~~~~-~~~~~~-------------------~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 173 (596)
-..+..... . .|.. .....| +.........++++.++.|+|.....+...+|+=
T Consensus 88 Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD 167 (539)
T PF03137_consen 88 PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID 167 (539)
T ss_dssp ----------------------------------------------------------------SSS-------------
T ss_pred cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec
Confidence 543221110 0 0000 000111 1111123567888999999999999999999999
Q ss_pred ccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccc---------------------ccc-chhhhHHHHHHHHH
Q 007604 174 DQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQD---------------------DVG-WALGYGLPALGLAI 231 (596)
Q Consensus 174 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~---------------------~~g-~~~~f~~~~~~~~~ 231 (596)
|..++++ -+...++.+....+|.++|.++++.... +.| |+..|.+.++..++
T Consensus 168 Dnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l 241 (539)
T PF03137_consen 168 DNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFL 241 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9999886 7888899999999999999888875531 123 77778777776666
Q ss_pred HHHHHHhcCCceecc
Q 007604 232 AIAIFLAGTPFYRHK 246 (596)
Q Consensus 232 ~~~~~~~~~~~~~~~ 246 (596)
..+.+++.+|+.++.
T Consensus 242 ~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 242 SAIPLFFFPKKLPGT 256 (539)
T ss_dssp ---------------
T ss_pred HHHHHHcCCccCCCc
Confidence 666666666665544
No 177
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.06 E-value=1.3e-07 Score=95.99 Aligned_cols=152 Identities=14% Similarity=0.068 Sum_probs=105.5
Q ss_pred HHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcc
Q 007604 59 YLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQD 138 (596)
Q Consensus 59 yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (596)
.+.++.|++..|++.+.........+..++.|.++||+ |||+..++..+++.++.+.-- +
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~-~------------------ 118 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH-S------------------ 118 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh-c------------------
Confidence 34468999999999999999999999999999999998 999999988888887775432 2
Q ss_pred ccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCC-ChhhhhhhhhhHHHHH-HHHHHHHHHhhhhhhhccccc
Q 007604 139 CRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEF-EPKEKAHKLSFFNWWM-FSIFFGTLLGNTVLVYIQDDV 216 (596)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~-~~~~ig~~l~~~~~~~l~~~~ 216 (596)
.+...++++|++.|++......+..+.......++ -|++ ..+.-++... +.+.+-++.+.+++.++.+..
T Consensus 119 ------~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~--~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~ 190 (354)
T PF05631_consen 119 ------SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQE--WLSDTFSLATFFGNGVVAIGAGVVANVLADWF 190 (354)
T ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH--HHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh
Confidence 17889999999999999999888877644332222 1111 1333333322 222233344444555555544
Q ss_pred c--chhhhHHHHHHHHHHHHHHHh
Q 007604 217 G--WALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 217 g--~~~~f~~~~~~~~~~~~~~~~ 238 (596)
+ ...+|..+.++.+++.+++..
T Consensus 191 ~~g~vaPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 191 GFGPVAPFDAAIVLLAVAAVLILK 214 (354)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHh
Confidence 4 478888888777666655443
No 178
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.06 E-value=4.1e-09 Score=110.23 Aligned_cols=156 Identities=15% Similarity=0.116 Sum_probs=119.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+..+.+.+..++....+++...++|.|+++ .|.+..+.+.+.+.+.++..++.++.|+++||+-+||+++.++..+.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 345555555566677778888999999975 7999999999999999999999999999999983456677777777777
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.+.+.... +.... ...++.|++.|...|...+...+..++++ +++...+
T Consensus 276 ~~~~~~~~~------------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~ 325 (355)
T TIGR00896 276 GLCGLLFAP------------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSA 325 (355)
T ss_pred HHHHHHHhh------------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHH
Confidence 776665442 11111 23457799999988888787776666543 3788888
Q ss_pred HHHHHHHHHHHHhhhhhhhcccccc-ch
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVG-WA 219 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g-~~ 219 (596)
+.+...++|..++|.+.|++.+..| |.
T Consensus 326 ~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 326 MAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 8888889999999999999988765 44
No 179
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.06 E-value=5.3e-09 Score=110.96 Aligned_cols=175 Identities=15% Similarity=0.036 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHH-HHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWG-GTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
.+..+...++...+......+.+.|+.+ .|+++.+.+++..... ....++.+++|++.||+ |+|+.+.++..+..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 3444444455555566666778888875 7999999999888775 46677789999999998 9999998877665333
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
.+......... . ..+....+....+.+++.|...+...+...+..++++ .+++.+++
T Consensus 288 ~~~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~ 344 (390)
T TIGR02718 288 ALLWFAQAAFW-L-----------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD-----QAGTDVTA 344 (390)
T ss_pred HHHHHHHHHcc-c-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-----chHHHHHH
Confidence 32222111000 0 0123333444445566677777777778777777632 38999999
Q ss_pred HHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHH
Q 007604 194 WMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIA 234 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 234 (596)
.+...++|..+||.++|++.+..||+..|++.++..+++++
T Consensus 345 ~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 345 VQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999989999999887765555543
No 180
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.02 E-value=3.2e-09 Score=114.26 Aligned_cols=162 Identities=13% Similarity=0.102 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.++.+++..++..+.++....+.+.|.+..++ ++.+.+.+.+...++..++.++.|+++||+ |||+++.++.++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 445556666666666666555555666655556 566777778888899999999999999998 999999999888888
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCCh-hhhhhhhhhH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEP-KEKAHKLSFF 191 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~ 191 (596)
+.++..+.. .+...+++..++.+++.+...+...++++|..|.++. ..++++|.++
T Consensus 300 ~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 356 (437)
T TIGR00792 300 GYLIFFFAG-----------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVY 356 (437)
T ss_pred HHHHHHHcc-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHH
Confidence 776665432 1445566677788899999899999999998874321 1122478999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccch
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGWA 219 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~~ 219 (596)
+++++...+|..+++.+.|++.+..||.
T Consensus 357 ~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 357 SVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999887766663
No 181
>PRK10054 putative transporter; Provisional
Probab=99.01 E-value=3.6e-09 Score=112.49 Aligned_cols=173 Identities=12% Similarity=0.018 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTD--KLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~ 111 (596)
.++...+..++..+.+.....+.+.|+.. +.+.+....+.+............++.|++.||+ ++|+.+.+++.+..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHH
Confidence 34444455555555554455566666643 3456666777788877777777888999999998 99999999988888
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++.+......+ +.+.+.+..++.++|.+...|...+++.+..|++. |++++
T Consensus 286 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~ 336 (395)
T PRK10054 286 IGLVGFIFSGN-----------------------SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYF 336 (395)
T ss_pred HHHHHHHHcch-----------------------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehH
Confidence 87766654321 45556667788999988888888899999999876 88888
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHH
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 237 (596)
+..+ ...+|..+||.++|++.+..|....|++.++...++.++.+
T Consensus 337 ~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 337 SAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred hHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 8654 56689999999999999999988888776555554444433
No 182
>PRK10133 L-fucose transporter; Provisional
Probab=99.01 E-value=6.6e-09 Score=112.00 Aligned_cols=164 Identities=13% Similarity=0.082 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYL-TDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
+...+..++.....++...+.+.|+ ++.+|+++.+.+.....+.++..++.+++|++.||+ |||+++..+.++.+++.
T Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~ 339 (438)
T PRK10133 261 RWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALC 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence 3344444555566666677888886 567899999999999999999999999999999998 99999988877776665
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
++..+.. +. ..+.+..+.|++.+...|...+...+.+|++ .+.+.++.
T Consensus 340 ~~~~~~~------------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-------~~~as~l~ 387 (438)
T PRK10133 340 LISAFAG------------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSFI 387 (438)
T ss_pred HHHHHcC------------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-------hccchhHH
Confidence 5444321 21 2245567789999999999999999998875 34444544
Q ss_pred HHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHHHHHHH
Q 007604 195 MFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAI 233 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~ 233 (596)
.. ..+|+.++|.+.|++.+..| -+..|++.+++.+..+
T Consensus 388 ~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 388 VM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred hH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 43 34678888889999988887 7888887766544333
No 183
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.00 E-value=6.1e-09 Score=114.40 Aligned_cols=169 Identities=13% Similarity=0.084 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhh------------HHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHH
Q 007604 39 VVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSAN------------NVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIA 106 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~------------~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~ 106 (596)
....++..+.+|++..+.|.+++ +.|++..+.+. ......++..++.+++++++||+ |||++++++
T Consensus 294 ~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~ 371 (502)
T TIGR00887 294 AGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMG 371 (502)
T ss_pred HHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHH
Confidence 34445566778888888888885 67887553321 12333456667888999999998 999999888
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhh
Q 007604 107 FFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAH 186 (596)
Q Consensus 107 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 186 (596)
..+..++..+.....+.. .+...+....+...++..+..+..+.+.+|.+|++.
T Consensus 372 ~~~~~~~~~~l~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------ 425 (502)
T TIGR00887 372 FFILTVLFFVLGFAYNHL--------------------STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------ 425 (502)
T ss_pred HHHHHHHHHHHHHHHHhc--------------------chhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------
Confidence 877777665555432100 011111111112222233345667788899999996
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhcccc----------ccchhhhHHHHHHHHHHHHH
Q 007604 187 KLSFFNWWMFSIFFGTLLGNTVLVYIQDD----------VGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 187 r~~~~~~~~~~~~ig~~l~~~~~~~l~~~----------~g~~~~f~~~~~~~~~~~~~ 235 (596)
|+++.++.+...++|++++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 426 R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 426 RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988763 34455666666555544443
No 184
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.99 E-value=1.8e-08 Score=107.45 Aligned_cols=158 Identities=12% Similarity=0.076 Sum_probs=106.7
Q ss_pred HHHHHHHhhhcCCChhhhhhHHHHHH-HHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 007604 54 SNLVMYLTDKLHHGTVKSANNVTNWG-GTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCN 132 (596)
Q Consensus 54 ~~l~~yl~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 132 (596)
.+.+.|+.+++|+++.+.+++..... .+..++.+++|++.||+ |||+.+.++..+..+..+........+
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~-------- 300 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTP-------- 300 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 34455677789999999999886654 56889999999999998 999988877776655544332211100
Q ss_pred CCCCccccccccchhHHHHHHHH----HHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhh
Q 007604 133 DINSQDCRKASTLQLGTFFAALY----TLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTV 208 (596)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~----l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~ 208 (596)
.+.+.+++..+ ..+++.+...+....++.+.+|.++ + ++++...++|..+++.+
T Consensus 301 ------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~l~~~~~~~~ 358 (402)
T PRK11902 301 ------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----ALLSALASVGRVYVGPT 358 (402)
T ss_pred ------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HHHHHHHHHHHHHHHHH
Confidence 13344444433 4455566666677777777766543 3 44444556777766668
Q ss_pred hhhccccccchhhhHHHHHHHHHHHHHHHhcCCc
Q 007604 209 LVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPF 242 (596)
Q Consensus 209 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (596)
+|++.+..||+..|.+.+++.++++++.+..++.
T Consensus 359 ~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 359 SGYLVEAYGWPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999888777766655444333
No 185
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.99 E-value=1.9e-08 Score=109.70 Aligned_cols=159 Identities=8% Similarity=-0.016 Sum_probs=111.7
Q ss_pred HHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 007604 53 SSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCN 132 (596)
Q Consensus 53 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 132 (596)
..+.|.+ .+++|.+.....+......+...++.+++|+++||+ |||+.++.+.++.+++.++++......
T Consensus 291 ~~~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~-------- 360 (479)
T PRK10077 291 LYYAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ-------- 360 (479)
T ss_pred HHHHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC--------
Confidence 3344444 457888887777777778888999999999999998 999999999999888887776542100
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHhccC-cccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhh-
Q 007604 133 DINSQDCRKASTLQLGTFFAALYTLAVGTGG-TKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLV- 210 (596)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~- 210 (596)
.... ....+.++.+.+.+. ..|...+++.|.+|+++ |+++.++.+...++|..+++.+.+
T Consensus 361 -----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~ 422 (479)
T PRK10077 361 -----------APGI-VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPM 422 (479)
T ss_pred -----------cccH-HHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 0011 222233344444433 34778899999999876 999999999888888888755544
Q ss_pred -----hccccccchhhhHHHHHHHHHHHHHHHhc
Q 007604 211 -----YIQDDVGWALGYGLPALGLAIAIAIFLAG 239 (596)
Q Consensus 211 -----~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (596)
++.+..+|+..|++.++..+++.+..+..
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 423 MDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred HHhccchhhhccCccHHHHHHHHHHHHHHHHHhc
Confidence 44467888888888776555554444433
No 186
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.98 E-value=2.8e-08 Score=105.62 Aligned_cols=166 Identities=6% Similarity=-0.069 Sum_probs=118.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+.++...+..++.....++...+++.++.+++|+++.+.+.+...+.++..++.++.|++.||. +|+..+....+....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~~~~~~~~~ 294 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAGAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHH
Confidence 3345444444555555566666664444567899999999999999999999999999999995 655444433332333
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.++..... +.+.+.+..++.|++.+...+...+++.+..|++ +++..+
T Consensus 295 ~~~l~~~~~------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 343 (394)
T PRK10213 295 ALVLTLWGS------------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGS 343 (394)
T ss_pred HHHHHHHhh------------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHH
Confidence 333322221 4556667778889999999999998899888754 556666
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHH
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLA 230 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~ 230 (596)
.+....++|..+|+.++|++.+..|++..++.+++..+
T Consensus 344 ~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~ 381 (394)
T PRK10213 344 IQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLML 381 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence 66777789999999999999998999888887765443
No 187
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.97 E-value=5.1e-09 Score=114.28 Aligned_cols=156 Identities=14% Similarity=0.149 Sum_probs=126.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.++...+..++..+.+++...++|.|+++.+|.++.+.++......++..++.+++|++.||+ |||+.+.++..+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 3455556666777778888889999999999999999999999999999999999999999998 999999998888887
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+..+...... + +.+...+....++.|+|.+...+.......+.+|+++ |+++.+
T Consensus 334 ~~~~~~~~~~-~-------------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~ 387 (485)
T TIGR00711 334 GFYWRAFTFT-P-------------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSS 387 (485)
T ss_pred HHHHHhccCC-C-------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHH
Confidence 7776652210 0 1134455566778899998888777777888888775 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccc
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDD 215 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~ 215 (596)
+++...++|+.+|+.+.+.+.+.
T Consensus 388 ~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888877653
No 188
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.97 E-value=1.3e-08 Score=111.17 Aligned_cols=165 Identities=14% Similarity=0.184 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 007604 42 EVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSV 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~ 121 (596)
.++..+....+...+|.+.++.+|.++...|++.+++.+|..++.++.+++.+|+ ++++.+..+.++++++.+.++++.
T Consensus 227 ~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~lal~~ 305 (524)
T PF05977_consen 227 SFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLLALSP 305 (524)
T ss_pred HHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHHhcch
Confidence 3333444444556788899999999999999999999999999999999999998 999999999888888888877764
Q ss_pred hccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHH
Q 007604 122 SLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFG 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 201 (596)
+.+...+..++.|++.........+.+-+..|++. ||+.+++++.....+
T Consensus 306 ------------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~~~~g~ 355 (524)
T PF05977_consen 306 ------------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQMVFFGG 355 (524)
T ss_pred ------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHHHHHHH
Confidence 66677777888899888888888899999999987 999999999999999
Q ss_pred HHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHH
Q 007604 202 TLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 202 ~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 237 (596)
..+|..+.|.+.+.+|.+.++.++++..+++.++..
T Consensus 356 ~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 356 MPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888887766555554443
No 189
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.96 E-value=8e-09 Score=113.25 Aligned_cols=154 Identities=8% Similarity=-0.075 Sum_probs=126.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.+....+..++..+.+++...++|.|+++.+|.++.+++.....+.++..++.++.|++.||+ |||+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3445555666667777788888999999999999999999999999999999999999999998 999999888888877
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.+++..... ..+.....+..++.|+|.|...+.......+..|+++ ++.+.+
T Consensus 338 ~~~~l~~~~~---------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~ 390 (495)
T PRK14995 338 SFYGLAMTDF---------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGA 390 (495)
T ss_pred HHHHHHHhcC---------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHH
Confidence 7766554321 0133445567788899999998888888999999886 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhccc
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQD 214 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~ 214 (596)
.++...++|..+|+.+.+.+.+
T Consensus 391 ~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 391 IETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988887754
No 190
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.95 E-value=3.4e-08 Score=104.03 Aligned_cols=161 Identities=7% Similarity=0.083 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
.+...+...+....++....+.|.|+++++|.++.+.+.+.....++..++.++.|++.||+ |||+.+..+..+..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 286 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSA 286 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44444444455556666777788899889999999999999999999999999999999998 99999998887777776
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
+++....... ......+.+..++.|++.+...+.......|..|++ |+++.++.
T Consensus 287 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~ 340 (385)
T TIGR00710 287 VLLEITAILG-------------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHV-------AGTASALF 340 (385)
T ss_pred HHHHHHHHhc-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-------chHHHHHH
Confidence 6665442100 013344555566788888888888888888888743 88999987
Q ss_pred HHHHHH-HHHHhhhhhhhccccccchhhhH
Q 007604 195 MFSIFF-GTLLGNTVLVYIQDDVGWALGYG 223 (596)
Q Consensus 195 ~~~~~i-g~~l~~~~~~~l~~~~g~~~~f~ 223 (596)
+..... |...++ +.+.+.+..+|...+.
T Consensus 341 ~~~~~~~g~i~~~-~~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 341 GTLRLVLGAIVGY-LVSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHH-HHHhccccChHHHHHH
Confidence 776655 555555 4555555445544443
No 191
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.95 E-value=4e-08 Score=98.88 Aligned_cols=164 Identities=17% Similarity=0.175 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
..|.+.+..-+.++.+|.++.|+|.++. +.|+|..++|.+++..++.+....+..-++++|...+|+......+.+.+|
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 3677777777899999999999999887 679999999999999999999999999999998878888888888889998
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
...+.+.+. +...+. .+++|+|.|+..|.+..++.+..++.+ +-++..++
T Consensus 288 ~~G~~~~P~-----------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~-----~Aa~LSgm 337 (395)
T COG2807 288 LVGLLLAPG-----------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAA-----IAAALSGM 337 (395)
T ss_pred HHHHHHhhh-----------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChH-----HHHHHHHH
Confidence 887776531 333333 478999999999999999999998875 36666677
Q ss_pred HHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHH
Q 007604 194 WMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALG 228 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~ 228 (596)
-+-...+=+++||.+.|++-|..| |+.+++.-+..
T Consensus 338 aQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~ 373 (395)
T COG2807 338 AQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALA 373 (395)
T ss_pred hhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHH
Confidence 777777778889999999988765 88776654443
No 192
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.91 E-value=1.5e-08 Score=104.04 Aligned_cols=174 Identities=13% Similarity=0.086 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
.+...++..++.+=+.-.+......|-...+|++..+...+....++.++++++++|+|.||+ |-|+++.+++++..+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHH
Confidence 455555555655555556778888899999999999999999999999999999999999998 9999999999887776
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
.+...+.. ....+++.-++.|+..|+.++..-++.++..|+++ -+++|++
T Consensus 332 ~~~~~~~~------------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFgl 381 (438)
T COG2270 332 ALYLIFLE------------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGL 381 (438)
T ss_pred HHHHHHcc------------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeeh
Confidence 66665442 23345555678899999999999999999999997 8999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHHHHHHHHHHHh
Q 007604 194 WMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 238 (596)
+.......+.+||.+.+.+.+..| -|..+..-.++..++++.++.
T Consensus 382 yaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 382 YALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEe
Confidence 999999999999999998877655 566665555555555555443
No 193
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.90 E-value=2.9e-08 Score=105.72 Aligned_cols=152 Identities=12% Similarity=0.050 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 007604 51 GISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPP 130 (596)
Q Consensus 51 ~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 130 (596)
....++|.|+++..+ ++.+.+++.+...++...+....+++.||.++.++.+..+.++..++.+++....
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--------- 295 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--------- 295 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---------
Confidence 345678888876555 7788888877777666655555566665543777777777777777776665543
Q ss_pred CCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhh
Q 007604 131 CNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLV 210 (596)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~ 210 (596)
+...+.+..++.+++.+...|...++..|..|+++ |++.+++++...++|..+||.+.|
T Consensus 296 ---------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G 354 (400)
T PRK11646 296 ---------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGG 354 (400)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchH
Confidence 44455556677888888888999999999999886 999999999999999999999999
Q ss_pred hccccc---c-chhhhHHHHHHHHHHH
Q 007604 211 YIQDDV---G-WALGYGLPALGLAIAI 233 (596)
Q Consensus 211 ~l~~~~---g-~~~~f~~~~~~~~~~~ 233 (596)
++.+.. + ....+++..+..+++.
T Consensus 355 ~l~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (400)
T PRK11646 355 WLFDLGKALNQPELPWMMLGIIGLITL 381 (400)
T ss_pred HHHHHHhhcCCcchHHHHHHHHHHHHH
Confidence 998753 2 3445544444433333
No 194
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.90 E-value=2.4e-08 Score=120.90 Aligned_cols=163 Identities=10% Similarity=0.008 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChh-hhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTV-KSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
.++..++..++..+..+.+..+++.|+.+.+|++.. +.+++.+...++..++.+++|+++||+ ++++++.++.++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHH
Confidence 344444444555555566778899999999999999 999999999999999999999999998 999999888888777
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+.+++.... +...+++..++.|++.++..+...+++.+.+|++. |+++++
T Consensus 312 ~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~ 361 (1146)
T PRK08633 312 SLFLLPTAP------------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLA 361 (1146)
T ss_pred HHHHHHHhh------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhH
Confidence 776666543 55566677888899999988899999999999986 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhccc-cccchhhhHHHHH
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQD-DVGWALGYGLPAL 227 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~-~~g~~~~f~~~~~ 227 (596)
+.++..++|.++++.+++.+.. .+++...|++.+.
T Consensus 362 ~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 362 ANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 9999999999888877665543 2345555554443
No 195
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.90 E-value=2.7e-08 Score=107.05 Aligned_cols=163 Identities=15% Similarity=0.143 Sum_probs=133.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|....++...++..++........+.|.+..+|.+ ...+.......++..++.++.++++||+ |||+++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 45666777777777777777778888888888877 5677778888999999999999999998 999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChh-hhhhhhhhH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPK-EKAHKLSFF 191 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~ 191 (596)
+.++..+... .+.+.+++..++.|++.+...+...++++|..+.++-+ .+++.|..+
T Consensus 303 ~~~~~~~~~~----------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~ 360 (428)
T PF13347_consen 303 GFLLLFFLGP----------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYF 360 (428)
T ss_pred HHHHHHHHHh----------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHH
Confidence 9888777631 26778888899999999999999999999999976422 123467888
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccch
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGWA 219 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~~ 219 (596)
+.+.+...+|..+++.+.+.+.+..|+.
T Consensus 361 s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 361 SVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 8999999999999999888775544443
No 196
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.89 E-value=6.2e-08 Score=103.65 Aligned_cols=185 Identities=11% Similarity=0.083 Sum_probs=125.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+..|.+.+..++...+|.+...++|.|+++.+. ............+...+..+++|+++||+ |+||++.++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 356777777777766777777799999887663 33333334455778889999999999998 999999999887777
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCC----------C--
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEF----------E-- 180 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~----------~-- 180 (596)
+........ |. ....+...+.+..+.+.++.|....+...++.+.+|++ .
T Consensus 329 ~~~~~~l~l--p~----------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~ 390 (462)
T PRK15034 329 FSALLFLTL--PG----------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDE 390 (462)
T ss_pred HHHHHHHHh--cc----------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchh
Confidence 664433321 10 00124556666666666777777778888888888741 0
Q ss_pred ---hhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHHHHHHHHHHHh
Q 007604 181 ---PKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 181 ---~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 238 (596)
...+.+-+...|+......+|+.+-|.+.|...+..| +...|+...+..++++++.+.
T Consensus 391 ~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 391 QAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 0011135667777788888888888878777765544 888888777766666555444
No 197
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.89 E-value=2.5e-08 Score=99.88 Aligned_cols=169 Identities=8% Similarity=-0.021 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------------------CCChhhhhhHHHHHHHHHHHhhhhhHHHhh
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKL-------------------HHGTVKSANNVTNWGGTIWVTPIFGAGVAE 94 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l-------------------g~~~~~~~~~~~~~~~~~~~~~~~~G~laD 94 (596)
..+.+....|.+.+.+||++-......+... ..+....-.=+.+.++.-+.|.++.+++.|
T Consensus 327 ttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 327 TTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHH
Confidence 4556777788889999998766554443211 112222223345567888999999999999
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhc
Q 007604 95 AYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAAD 174 (596)
Q Consensus 95 ~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 174 (596)
|+ |||+++..+++++.+..+++....+ + +.....++.+|+.+..+ ..+++.|..|
T Consensus 407 rl-GRKkTMal~l~~f~iflfll~~c~~-------------------r-n~~tvllf~arafisg~----fqvaYvYtPE 461 (528)
T KOG0253|consen 407 RL-GRKKTMALSLILFGIFLFLLTTCKT-------------------R-NAYTVLLFTARAFISGA----FQVAYVYTPE 461 (528)
T ss_pred Hh-cchhHHHHHHHHHHHHHHHHHHhcC-------------------c-chhHHHHHHHHHHHhch----heEEEEecCc
Confidence 97 9999999999999998877765531 0 11223355666665443 4568899999
Q ss_pred cCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHH
Q 007604 175 QFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 175 ~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (596)
.+|... |+.+.|.-..+..+|+++.|.++ .... -.-..+..+...+.+++.++
T Consensus 462 VyPTav------RatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIa 514 (528)
T KOG0253|consen 462 VYPTAV------RATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIA 514 (528)
T ss_pred ccchhh------hhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHH
Confidence 999997 99999999999999999999887 3322 22223344444444444443
No 198
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.88 E-value=2.4e-08 Score=120.74 Aligned_cols=183 Identities=11% Similarity=-0.014 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+.++...+..++..+.++++..++|.|+.+.+|.+..+.+++.+.+.++..++.++.|+++|+. ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4466666666666777777888999999999999999999999999999999999999999987 777766666655555
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCcc-ccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQD-CRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
+.+.+.+... ....... .... .......+.+.++++.++.|++.+...+...+++.+.+|++. ||+++
T Consensus 304 ~~~~l~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~ 372 (1140)
T PRK06814 304 FGLDLAFASS-SVPAEPA----QLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVI 372 (1140)
T ss_pred HHHHHHhccc-ccccccc----cccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeee
Confidence 4443333200 0000000 0000 000000144566777888999999999999999999999997 99999
Q ss_pred HHHHHHHHHHHHHhhhhhhhccc-cccchhhhHHHHH
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQD-DVGWALGYGLPAL 227 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~-~~g~~~~f~~~~~ 227 (596)
+..+...++|..+++++.+.+.+ ..++...+++.++
T Consensus 373 g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 373 AANNVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 99999999999999999888863 4456666554443
No 199
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.87 E-value=3.1e-06 Score=89.66 Aligned_cols=100 Identities=10% Similarity=0.002 Sum_probs=80.2
Q ss_pred HHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHH
Q 007604 75 VTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAAL 154 (596)
Q Consensus 75 ~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (596)
..+.+....+..++++.+.|+. |.|..+.++...+..-.+..... |...++.+-
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~-------------------------N~y~~yfss 109 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFP-------------------------NSYYLYFSS 109 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhc-------------------------chHHHHHHH
Confidence 6677788889999999999998 99999999988877665554432 677889999
Q ss_pred HHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhh
Q 007604 155 YTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGN 206 (596)
Q Consensus 155 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~ 206 (596)
.+.|+|.+..+...-.+.++..+++. +.+..++.-.....+..+|.
T Consensus 110 allG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Gg 155 (461)
T KOG3098|consen 110 ALLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGG 155 (461)
T ss_pred HHhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999988875 67777665555555555554
No 200
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.87 E-value=7.4e-08 Score=101.37 Aligned_cols=167 Identities=12% Similarity=-0.029 Sum_probs=112.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchh---HHHHH-HHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRY---WTFVI-AFF 108 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk---~~~~~-~~~ 108 (596)
|..|.+.+..++....+|++..|+|.|+++ .|++.. .+.......+...++ .++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 557888888899999999999999999964 677764 555544444444444 57888886 543 33222 333
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhh
Q 007604 109 FYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKL 188 (596)
Q Consensus 109 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (596)
+.+++....+... +.....+...+.+++.....+...++.+|.+|++. |+
T Consensus 266 ~~a~~~~~~~~~~------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rg 315 (368)
T TIGR00903 266 LIAAFFLALAFEL------------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HG 315 (368)
T ss_pred HHHHHHHHHHHcc------------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cC
Confidence 3333333333221 22233344455666677777778899999999987 99
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHH
Q 007604 189 SFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFL 237 (596)
Q Consensus 189 ~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 237 (596)
++.++.+...++|+..+|.+.+.+.. |....|.+.++..+++.+..+
T Consensus 316 t~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 316 KAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988887763 566667666655555554443
No 201
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.86 E-value=6.9e-09 Score=107.68 Aligned_cols=143 Identities=15% Similarity=0.223 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-hhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHG-TVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
|.+....++..+.++....+++.|+.+.+|.+ ..+.+.+.+...++..++.++.|+++||+ |+|+...+......++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~ 287 (352)
T PF07690_consen 209 WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGA 287 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHH
Confidence 33444445555667778899999999999999 79999999999999999999999999998 98888877777666666
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
+.+...... .+....+...++.|++.+...+...++..|.+|+++ |+++.++.
T Consensus 288 ~~~~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 340 (352)
T PF07690_consen 288 LGLLLLPFS---------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLF 340 (352)
T ss_dssp HHHCCSHHH---------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHH
T ss_pred HHHHHHHHh---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHH
Confidence 555443210 134556667778899999999999999999999886 99999999
Q ss_pred HHHHHHHHHHhh
Q 007604 195 MFSIFFGTLLGN 206 (596)
Q Consensus 195 ~~~~~ig~~l~~ 206 (596)
+...++|..+||
T Consensus 341 ~~~~~~~~~igP 352 (352)
T PF07690_consen 341 NSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC
Confidence 999999999987
No 202
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.85 E-value=9.5e-08 Score=101.55 Aligned_cols=158 Identities=12% Similarity=-0.022 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 007604 46 RMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSG 125 (596)
Q Consensus 46 ~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~ 125 (596)
..........++.|+++.+|.++.+.|.+.+...++..++.++.+++.||+ ++|+++..+..+ .+..++.....
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHHh----
Confidence 334444556677788889999999999999999999999999999999998 999888777533 33333333321
Q ss_pred CCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHh
Q 007604 126 LKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLG 205 (596)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~ 205 (596)
+.+...+..++.|++.+...+...+.+.+..|++. +++++.+..+...++|..++
T Consensus 292 --------------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~ 346 (393)
T PRK11195 292 --------------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLM 346 (393)
T ss_pred --------------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHH
Confidence 44445566678899988888888888877655442 37999999999999999999
Q ss_pred hhhhhhccccccchhhhHHHHHHHHHHHHH
Q 007604 206 NTVLVYIQDDVGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 206 ~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (596)
..+.+.+ +..|-+..+++.+...++....
T Consensus 347 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 347 LGLYSLL-VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHHHHH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 9888855 4577777777766554444433
No 203
>PRK09848 glucuronide transporter; Provisional
Probab=98.85 E-value=2.4e-08 Score=108.08 Aligned_cols=163 Identities=15% Similarity=0.164 Sum_probs=122.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.++...+..++....++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4455566666666666666667777788888888776666555555677888999999999998 999999999988888
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhh-hhhhhhhH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKE-KAHKLSFF 191 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~ 191 (596)
+.+++.+... .+.+.+++..++.++|.+...+...++.+|..|.++-+. ++++|..+
T Consensus 307 ~~~~~~~~~~----------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~ 364 (448)
T PRK09848 307 GYLLFFWVSV----------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTY 364 (448)
T ss_pred HHHHHHHcCc----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHH
Confidence 8776654320 145556667778899999999999999999988654211 12358888
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccc
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGW 218 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~ 218 (596)
+.+++...+|..+|+.+.+.+.+..||
T Consensus 365 ~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 365 SLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999888876544444
No 204
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.84 E-value=3.4e-08 Score=107.48 Aligned_cols=176 Identities=12% Similarity=0.118 Sum_probs=147.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcc--hhHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLG--RYWTFVIAFFFY 110 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G--rk~~~~~~~~~~ 110 (596)
+.++.+.+...+..++++.-..+++.|.. ..|++..+++.++++..+..+++.++.|+++|+. . ++.+..+++++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 45677777777888888888888888887 8999999999999999999999999999999998 6 444555566666
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++...+++.. +...++..-++.|+..|.+....+..+.|..+.++ ...+
T Consensus 376 gl~~~~~p~~~------------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a 425 (509)
T KOG2504|consen 376 GLARLFLPFAT------------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNA 425 (509)
T ss_pred HHHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchH
Confidence 66666666653 56677778888999999999988899999999986 9999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccc-chhhhHHHHHHHHHHHHHHHhcC
Q 007604 191 FNWWMFSIFFGTLLGNTVLVYIQDDVG-WALGYGLPALGLAIAIAIFLAGT 240 (596)
Q Consensus 191 ~~~~~~~~~ig~~l~~~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 240 (596)
+++......++..+||.++|++.+..| |...|+.+.+..+++....+..+
T Consensus 426 ~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 426 YGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999999999999998887 99999999888777775554444
No 205
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.84 E-value=2.7e-08 Score=106.96 Aligned_cols=179 Identities=15% Similarity=0.023 Sum_probs=122.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcc-------hhHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLG-------RYWTF 103 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-------rk~~~ 103 (596)
..+.+|.+.+..++...+++.+..++|.|+.+-+|++..+.|+..++..+...+..+++|.++||... +||.+
T Consensus 256 ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkif 335 (466)
T KOG2532|consen 256 TSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIF 335 (466)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHH
Confidence 33568999999999999999999999999999999999999999999999999999999999999833 12222
Q ss_pred H-HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhc-cCcccchhhhhhccCCCCCh
Q 007604 104 V-IAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGT-GGTKPNILTIAADQFDEFEP 181 (596)
Q Consensus 104 ~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~-g~~~~~~~~~~~~~~~~~~~ 181 (596)
- ++....+++.+.+++.. | .+....++ .+.++++. |...+-...-..|..|.+
T Consensus 336 n~i~~~~~ai~l~~l~~~~---------~-------------~~~~~a~~-~l~~~~~~~g~~~~Gf~~~~~~~apq~-- 390 (466)
T KOG2532|consen 336 NTIAFGGPAVFLLVLAFTS---------D-------------EHRLLAVI-LLTIAIGLSGFNISGFYKNHQDIAPQH-- 390 (466)
T ss_pred HhHHHHHHHHHHHeeeecC---------C-------------CcchHHHH-HHHHHHHHcccchhhhHhhhhhccchH--
Confidence 1 22233333333333321 0 01111111 11111121 121222222233334443
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccc---ccchhhhHHHHHHHHHHHHHHHhc
Q 007604 182 KEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDD---VGWALGYGLPALGLAIAIAIFLAG 239 (596)
Q Consensus 182 ~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~ 239 (596)
-+..+++.+...++.+.++|.+.+.+... ..|+.+|++.++..+++.+.+.+.
T Consensus 391 -----a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 391 -----AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 78889999999999999999999999843 369999999998877777655443
No 206
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.82 E-value=5.5e-08 Score=101.72 Aligned_cols=145 Identities=8% Similarity=-0.007 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHH-HHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWG-GTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
..+.+.+..++..+.++....+++.|+++ +|+++.+.+.+.++.. ++..++.+++|+++||+ |||+.+.++.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 35556666666778888888999999987 9999999998887665 57789999999999998 999999988887777
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+..+.....+..... | .+..+...+....++.+++.+...+...++..|.+|++. |++.++
T Consensus 288 ~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g 348 (356)
T TIGR00901 288 TNAGFVWLASNGHHD-------G------ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMA 348 (356)
T ss_pred HHHHHHHHHhcCccc-------c------cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHH
Confidence 665554431100000 0 000134556667778899999999999999999999997 999999
Q ss_pred HHHHHHH
Q 007604 193 WWMFSIF 199 (596)
Q Consensus 193 ~~~~~~~ 199 (596)
+++...+
T Consensus 349 ~~~~~~~ 355 (356)
T TIGR00901 349 LLSSLSA 355 (356)
T ss_pred HHHHHHh
Confidence 8776654
No 207
>TIGR00898 2A0119 cation transport protein.
Probab=98.80 E-value=4.3e-08 Score=107.69 Aligned_cols=133 Identities=10% Similarity=-0.041 Sum_probs=97.4
Q ss_pred HHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHH
Q 007604 75 VTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAAL 154 (596)
Q Consensus 75 ~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (596)
.....+...++.++++++.||+ |||+++.++.++..++.+++....+ .......+..
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~----------------------~~~~~~~~~~ 417 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV----------------------DLYFLRTALA 417 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC----------------------CchHHHHHHH
Confidence 3445667788899999999998 9999999998888887776665421 0122333444
Q ss_pred HHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHH
Q 007604 155 YTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIA 234 (596)
Q Consensus 155 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 234 (596)
++.+++.+...+....+.+|.+|++. |+++.++.+....+|++++|.+.+ +. ..++..++++.++..+++.+
T Consensus 418 ~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~ 489 (505)
T TIGR00898 418 VLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGI 489 (505)
T ss_pred HHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHH
Confidence 55566666667888899999999986 999999999999999999998888 43 35566677766655555544
Q ss_pred HHHh
Q 007604 235 IFLA 238 (596)
Q Consensus 235 ~~~~ 238 (596)
..++
T Consensus 490 ~~~~ 493 (505)
T TIGR00898 490 LTLF 493 (505)
T ss_pred HHHc
Confidence 4433
No 208
>PRK11043 putative transporter; Provisional
Probab=98.77 E-value=5.5e-07 Score=95.80 Aligned_cols=150 Identities=10% Similarity=0.021 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhh
Q 007604 43 VFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVS 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~ 122 (596)
.+....++....+.|.|++ +.|+++.+.+.......++..++.++++++.||+ |||+.+....++..++.+.+.....
T Consensus 213 ~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (401)
T PRK11043 213 AACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASL 290 (401)
T ss_pred HHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455566677888876 5799999999888888889999999999999998 9999877666655555443332211
Q ss_pred ccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHH
Q 007604 123 LSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGT 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 202 (596)
.. ..+...+.+...+.+++.+...|...+...|..|+ + ++++.++++.....++
T Consensus 291 ~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~~~~~~ 344 (401)
T PRK11043 291 LS-------------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A------TGKAAALQNTLQLGLC 344 (401)
T ss_pred hc-------------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c------ChHHHHHHHHHHHHHH
Confidence 00 01334445556677888888888888888888765 3 8999999988888888
Q ss_pred HHhhhhhhhccccccchh
Q 007604 203 LLGNTVLVYIQDDVGWAL 220 (596)
Q Consensus 203 ~l~~~~~~~l~~~~g~~~ 220 (596)
.+++.+.+.+.+......
T Consensus 345 ~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 345 FLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHccCCChhHH
Confidence 888888888876443333
No 209
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.76 E-value=6.8e-08 Score=103.07 Aligned_cols=193 Identities=11% Similarity=0.048 Sum_probs=129.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHH
Q 007604 30 GGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF 109 (596)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 109 (596)
..++.....+...++..+.-.....+....+-++-|++..++.++.........+..+++.++.||. |||+.++++..+
T Consensus 266 ~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~ 344 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSL 344 (485)
T ss_pred chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHH
Confidence 3445566666666666665444445555566668899999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCc-ccchhhhhhccCCCCChhhhhhhh
Q 007604 110 YLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGT-KPNILTIAADQFDEFEPKEKAHKL 188 (596)
Q Consensus 110 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~-~~~~~~~~~~~~~~~~~~~~~~r~ 188 (596)
+.+..+++.....+... ..++-....+++.++..++.+.. .|..+-+.+|.+|+.. |.
T Consensus 345 ~~~~~~~~~~~~~l~~~---------------~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~ 403 (485)
T KOG0569|consen 345 MAVALLLMSIALFLSNS---------------FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RS 403 (485)
T ss_pred HHHHHHHHHHHHHHHHH---------------hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hH
Confidence 88887777665422100 00001112234444433333333 6888999999999997 99
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCceec
Q 007604 189 SFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFYRH 245 (596)
Q Consensus 189 ~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 245 (596)
.+.++......+...+-......+.+..|- ..|.+.++..++..+..+...|+.+.
T Consensus 404 aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 404 AAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 999887777766666655566666666664 45555555544555555555555443
No 210
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.73 E-value=3.3e-07 Score=97.20 Aligned_cols=70 Identities=13% Similarity=0.049 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 007604 50 HGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALS 120 (596)
Q Consensus 50 ~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~ 120 (596)
.....+.+.|+.+++|+++.+.+.+.....++..++.++.|++.||+ |||+.+.++.++..++.+++...
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445667788888999999999999999999999999999999998 99999999988888887777665
No 211
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.73 E-value=7e-07 Score=93.97 Aligned_cols=148 Identities=9% Similarity=0.011 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
.+..++..++.....+....+.+.++.+.+|+++.+.+.+.....++..++.+++|+++||+ |||+++.++..+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 44444444455555555666677788888999999999999999999999999999999998 99999998887654433
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWW 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (596)
+........+ .+...+.++..+.+.+.+...+.....+.|..|+ . +++..+..
T Consensus 275 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~~~~ 327 (377)
T PRK11102 275 IWLVVSALLD--------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH-M------AGTASSLA 327 (377)
T ss_pred HHHHHHHHHh--------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc-c------chHHHHHH
Confidence 3322221000 1233333444444555555566666777787773 3 78887775
Q ss_pred HHH-HHHHHHHhhhhhh
Q 007604 195 MFS-IFFGTLLGNTVLV 210 (596)
Q Consensus 195 ~~~-~~ig~~l~~~~~~ 210 (596)
+.. ..+|..+++.+++
T Consensus 328 ~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 328 GTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 543 3467777775544
No 212
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.72 E-value=7.5e-09 Score=107.10 Aligned_cols=149 Identities=15% Similarity=0.168 Sum_probs=124.9
Q ss_pred cccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCc
Q 007604 372 PPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQ 451 (596)
Q Consensus 372 ~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (596)
..++++....+..+++.|+++.+.|++-||+ .+.+|..+++++++..++.
T Consensus 69 ~~Gll~~vf~v~~~i~sPl~gyLadryNR~~-----------v~~vG~~iW~~Av~~~~fs------------------- 118 (493)
T KOG1330|consen 69 ELGLLQTVFIVVFMIASPLFGYLADRYNRKR-----------VIAVGIFIWTLAVFASGFS------------------- 118 (493)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHhhcCcce-----------EEeeHHHHHHHHHHHHHHH-------------------
Confidence 3466777788888999999999888777774 3888999999998887774
Q ss_pred ceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccC
Q 007604 452 VPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNN 531 (596)
Q Consensus 452 ~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~ 531 (596)
.++|.+.+.=.+.|+||....|....++++.+|+..|++..++++++..+|..+|..+.+.+..++.
T Consensus 119 --~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~----------- 185 (493)
T KOG1330|consen 119 --NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF----------- 185 (493)
T ss_pred --HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-----------
Confidence 2667777788999999999999999999999999999999999999999999999999888876442
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHhhccccccC
Q 007604 532 LNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKAE 567 (596)
Q Consensus 532 ~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~ 567 (596)
++.|.|+..++++++.+++..++.++.+++..
T Consensus 186 ----~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~ 217 (493)
T KOG1330|consen 186 ----WWRWAFRGSAVLGVIVGLLVFLFVREPERGAR 217 (493)
T ss_pred ----ceEEEEEeehHHHHHHHHHHHhhccCcccccc
Confidence 23677888999999988888888777665443
No 213
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.72 E-value=1.5e-07 Score=102.70 Aligned_cols=165 Identities=15% Similarity=0.035 Sum_probs=116.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
|.+..++...++.....+....+.+.|++..++ +....+.+.+...++..++.++.++++||+ |||++++++..+.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 556666666666666666555666555544444 556667777777788899999999999998 999999988887776
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCC-hhhhhhhhhhH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFE-PKEKAHKLSFF 191 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~ 191 (596)
+.+........+ +.+...+++..++.+++.+...+...++++|..|.++ +..+++.|..+
T Consensus 309 ~~~~~~~~~~~~-------------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~ 369 (473)
T PRK10429 309 SCGVLLLMGLAA-------------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAY 369 (473)
T ss_pred HHHHHHHHhccC-------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHH
Confidence 665544321000 1145556666777889999999999999999988543 11222356678
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccc
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGW 218 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~ 218 (596)
+...+...+|..+|+.+.|++.+..||
T Consensus 370 s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 370 SVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 889999999999999998887655554
No 214
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.68 E-value=1.4e-06 Score=91.81 Aligned_cols=138 Identities=16% Similarity=0.249 Sum_probs=97.5
Q ss_pred ccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCccee
Q 007604 375 SLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPL 454 (596)
Q Consensus 375 ~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (596)
.....+-.+-++.-++..+++.|+++. +.+.+|+.+..+=++.++..+
T Consensus 410 v~~a~~~~gEI~~~ffs~klI~kiGHv-----------~v~~lgLa~~~~Rf~~~S~L~--------------------- 457 (618)
T KOG3762|consen 410 VVSALCHAGEILFYFFSFKLIEKIGHV-----------NVMYLGLACNVGRFLYYSYLQ--------------------- 457 (618)
T ss_pred ehhhhhccchHHHHHHHHHHHHHhccc-----------ceeeehhhHHHHHHHHHHHhc---------------------
Confidence 334444555555555666655555544 446777777777777777653
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHH-HHhHHHHHHhHHHhhhhccccccCCCCccccCCc
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMT-TLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLN 533 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~-~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~ 533 (596)
++|..++.-++.|+..+..+.+.-+|+...+|+++|.+++|+... ..++|-.+|+.+.+.+....
T Consensus 458 n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-------------- 523 (618)
T KOG3762|consen 458 NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-------------- 523 (618)
T ss_pred CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee--------------
Confidence 677778888999999999999999999999999999999999874 66778888888877775422
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhh
Q 007604 534 VCHLDYYYAFFAILNVLNFVFFLVVAK 560 (596)
Q Consensus 534 ~~~~~~~f~~~~~~~~v~~~~~~~~~~ 560 (596)
+.-.+|+.+++.+++.++++..+-+
T Consensus 524 --g~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 524 --GARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1234577666666655555555433
No 215
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.66 E-value=1.7e-07 Score=98.07 Aligned_cols=140 Identities=15% Similarity=0.187 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
..+.+.+..++.....+++..+++.|+++.+|.++.+.+...+...++..++.+++|+++||+ |||+.+..+......+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 345555555555566677888999999999999999999999999999999999999999998 9999888777766666
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
..++..... .+.+...+.+...+.+++.|...+...++.++.+|.+ +++..++
T Consensus 305 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~g~~~g~ 357 (366)
T TIGR00886 305 AFLVVLGLV--------------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRA-------TGAVSGL 357 (366)
T ss_pred HHHHHhcCC--------------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchhh-------cccHHHH
Confidence 555544310 0003334444555566666666777778888888743 8999998
Q ss_pred HHHHHHHH
Q 007604 194 WMFSIFFG 201 (596)
Q Consensus 194 ~~~~~~ig 201 (596)
.+...++|
T Consensus 358 ~~~~~~~g 365 (366)
T TIGR00886 358 VGAIGNLG 365 (366)
T ss_pred HHHhccCC
Confidence 87777665
No 216
>PRK09669 putative symporter YagG; Provisional
Probab=98.65 E-value=2.3e-07 Score=100.34 Aligned_cols=160 Identities=13% Similarity=0.099 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
++.++...++............+.|.+..++ ++...+.+.....+...++.+++++++||+ |||+.+.++.++..++.
T Consensus 231 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~ 308 (444)
T PRK09669 231 WRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILS 308 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 3444444444433333233333334443343 333444555666778888999999999998 99999998877665544
Q ss_pred HHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhh-hhhhhhhHHH
Q 007604 115 IVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKE-KAHKLSFFNW 193 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~ 193 (596)
+...+.. +.+...+++..++.|++.+...+...++++|..+.++.+. +++.+..++.
T Consensus 309 ~~~~~~~----------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~ 366 (444)
T PRK09669 309 ALIFFIP----------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFST 366 (444)
T ss_pred HHHHHhC----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHH
Confidence 3332221 0155566777788999999999999999999998554221 1235667788
Q ss_pred HHHHHHHHHHHhhhhhhhccccccc
Q 007604 194 WMFSIFFGTLLGNTVLVYIQDDVGW 218 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~~~g~ 218 (596)
+.++..+|.++|+.++|++.+..||
T Consensus 367 ~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 367 NLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999888766665
No 217
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.64 E-value=3.6e-07 Score=95.70 Aligned_cols=178 Identities=11% Similarity=0.071 Sum_probs=137.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---CChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHH
Q 007604 32 WRACSFVVVYEVFERMAYHGISSNLVMYLTDKLH---HGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFF 108 (596)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 108 (596)
-|++|.+.+........++..-...+.|.+..++ .++...|.+.+...+.-.+.-.+..++.+|+ |.|+.++++.+
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 3567766665555555555555567888875543 4556688888889999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhh
Q 007604 109 FYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKL 188 (596)
Q Consensus 109 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (596)
+.++=.+++++++ +++.+.+...+.++-.+....++.-|+++.+|++- .+
T Consensus 298 i~~iRi~~~~~~~------------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sA 347 (412)
T PF01306_consen 298 IMAIRIIGSGFAT------------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SA 347 (412)
T ss_dssp HHHHHHHHHHT--------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HH
T ss_pred HHHHHHHHHhhhc------------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HH
Confidence 9888888887765 78888999999999999999999999999999875 67
Q ss_pred hhHHH-HHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHH-HHHHHhcC
Q 007604 189 SFFNW-WMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIA-IAIFLAGT 240 (596)
Q Consensus 189 ~~~~~-~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~-~~~~~~~~ 240 (596)
+...+ ++.+..+|..+.+.++|++.|..|++..|++-+...+.. ++.++.++
T Consensus 348 t~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 348 TLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 77777 567888999999999999999999998887766554433 33344443
No 218
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.63 E-value=1.3e-06 Score=92.57 Aligned_cols=161 Identities=8% Similarity=0.001 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
.....++..++.....-....+.+.|+++.-|.+....+.+.+...++-.+.-.+.+++..|+ |-|++++++.+..++=
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR 286 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVR 286 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344444455555555555668889998855447778888877888888889999999999998 9999999999998887
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
..+.+..++ + .+.......++..+.|+..|.+..+...++.+..|++. |+++.++
T Consensus 287 ~~l~a~~~~-~------------------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l 341 (400)
T PF03825_consen 287 WLLYAYFSD-P------------------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGL 341 (400)
T ss_pred HHHHHHhcC-C------------------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHH
Confidence 777766521 0 00011223344567899999999999999999999997 9999998
Q ss_pred HHHH-HHHHHHHhhhhhhhccccccchh
Q 007604 194 WMFS-IFFGTLLGNTVLVYIQDDVGWAL 220 (596)
Q Consensus 194 ~~~~-~~ig~~l~~~~~~~l~~~~g~~~ 220 (596)
+... ..+|..+|..++|++.+.+|-+.
T Consensus 342 ~~~~~~Glg~~iG~~igG~l~~~~g~~~ 369 (400)
T PF03825_consen 342 YSALSFGLGGAIGSLIGGWLYDAFGARG 369 (400)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcchh
Confidence 7764 57999999999999998877443
No 219
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.61 E-value=1.8e-06 Score=76.26 Aligned_cols=134 Identities=19% Similarity=0.260 Sum_probs=97.4
Q ss_pred ccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehh
Q 007604 377 TGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTI 456 (596)
Q Consensus 377 ~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (596)
.....++.++..++.+++.|+.+|| +.+..+..+..++.+..... .+.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~-----------~~~~~~~~~~~~~~~~~~~~---------------------~~~ 51 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRK-----------PVLLVGLFIFVLSTAMFALS---------------------SNI 51 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchh-----------HHHHHHHHHHHHHHHHHHHh---------------------ccH
Confidence 3445667778888888887777766 33555666666665554432 244
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccc
Q 007604 457 FIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCH 536 (596)
Q Consensus 457 ~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~ 536 (596)
+.+....++.+++.+...+....+..|..|++.|++.+++.+....+|..+++.+.+.+.+. .+
T Consensus 52 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------------~~ 115 (141)
T TIGR00880 52 TVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF----------------LG 115 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc----------------cc
Confidence 55666778899999999999999999999999999999999999999999999998887531 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 007604 537 LDYYYAFFAILNVLNFVFFLVV 558 (596)
Q Consensus 537 ~~~~f~~~~~~~~v~~~~~~~~ 558 (596)
+.+.|++.++..++..+..+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 116 WRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hHHHHHHHHHHHHHHHHHHhhc
Confidence 3456666666666555554443
No 220
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.61 E-value=8.3e-07 Score=94.86 Aligned_cols=163 Identities=11% Similarity=-0.046 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKL-HHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
.+..++..++......++.++++.|+.+.. +.+....+...+.+..+..++.+++|+++||+ ++|+++.++.++.++.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 343444445544444466688899986532 45555556667777788999999999999998 9999998888887777
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHH
Q 007604 114 MIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNW 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (596)
.++..... +.. ......+.|++.+...|...++..+..+++. ..+.+.
T Consensus 313 ~ll~~~~~------------------------~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~-------~~~s~~ 360 (410)
T TIGR00885 313 CLGSIFAG------------------------GHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDT-------KYGAAG 360 (410)
T ss_pred HHHHHHcC------------------------ChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHH
Confidence 77666542 222 2455667778888888999999999998763 233333
Q ss_pred HHHHHHHHHHHhhhhhhhccccc------cchhhhHHHHHHHHH
Q 007604 194 WMFSIFFGTLLGNTVLVYIQDDV------GWALGYGLPALGLAI 231 (596)
Q Consensus 194 ~~~~~~ig~~l~~~~~~~l~~~~------g~~~~f~~~~~~~~~ 231 (596)
..++ .+|+++.|.+.|++.|.. +.+..|+++.++.+.
T Consensus 361 l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 361 LVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 3333 399999999999999843 478888877765443
No 221
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.58 E-value=2.4e-06 Score=91.41 Aligned_cols=139 Identities=14% Similarity=0.132 Sum_probs=102.6
Q ss_pred cccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceeh
Q 007604 376 LTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLT 455 (596)
Q Consensus 376 ~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (596)
..+...++..++.++.+.+.||++|| +.+..+.++.+++.+..... .+
T Consensus 56 ~~s~~~~~~~~~~~~~G~l~dr~Grr-----------~~l~~~~~~~~~~~~~~~~a---------------------~~ 103 (413)
T PRK15403 56 SVSLYLAGGMALQWLLGPLSDRIGRR-----------PVLITGALIFTLACAATLFT---------------------TS 103 (413)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHcCch-----------HHHHHHHHHHHHHHHHHHHc---------------------CC
Confidence 34455667777888888888888887 34666777777666655543 35
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCccc
Q 007604 456 IFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVC 535 (596)
Q Consensus 456 ~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~ 535 (596)
++.+++.-++.|++++...+..+.++.|..|++.+++.+++.+....++..+|+.+.+.+.+. .
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~----------------~ 167 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF----------------V 167 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------c
Confidence 667777778899998877777788888999999999999999999999999999988776531 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007604 536 HLDYYYAFFAILNVLNFVFFLVVAKFY 562 (596)
Q Consensus 536 ~~~~~f~~~~~~~~v~~~~~~~~~~~~ 562 (596)
++.+.|++.+++.++..++.++..++.
T Consensus 168 gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 168 HWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 346678877777776655544444443
No 222
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.55 E-value=4.6e-06 Score=88.48 Aligned_cols=139 Identities=9% Similarity=-0.006 Sum_probs=98.8
Q ss_pred HHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 007604 53 SSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCN 132 (596)
Q Consensus 53 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 132 (596)
....+.|+++.+|.++.+.++.......+..++.++.+++.||+ ||+... +.....++.+.........
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~-------- 295 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFG-------- 295 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhc--------
Confidence 34566788888999999999988888888888999999999998 743332 2222222222221111000
Q ss_pred CCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhc
Q 007604 133 DINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYI 212 (596)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l 212 (596)
..+...+.++.++.++|.+...|...++..|.+|++ ++...++.+...++|+.+++.+++++
T Consensus 296 -----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 296 -----------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYL-------AGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred -----------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-------chHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 013455667778889999999999999999988743 78889999988999999999999888
Q ss_pred cccccchh
Q 007604 213 QDDVGWAL 220 (596)
Q Consensus 213 ~~~~g~~~ 220 (596)
.....+..
T Consensus 358 ~~~~~~~~ 365 (394)
T PRK11652 358 PQTGQFSL 365 (394)
T ss_pred cCCchHHH
Confidence 76544443
No 223
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.49 E-value=2.8e-06 Score=81.78 Aligned_cols=97 Identities=14% Similarity=0.111 Sum_probs=73.6
Q ss_pred HHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCC
Q 007604 57 VMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINS 136 (596)
Q Consensus 57 ~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 136 (596)
..|+....|+...++|.+..+.....++...+.|-++|+- |||+.-+. +++..+++-+..+.|
T Consensus 60 vYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvt----ycitYiLsCiTKhSp------------ 122 (454)
T KOG4332|consen 60 VYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVT----YCITYILSCITKHSP------------ 122 (454)
T ss_pred eeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceee----ehHHHHHHHHhhcCC------------
Confidence 3466778899999999998888888899999999999998 99997554 344445554444322
Q ss_pred ccccccccchhHHHHHHHHHHHHhccCcccchhh-hhhccCCCC
Q 007604 137 QDCRKASTLQLGTFFAALYTLAVGTGGTKPNILT-IAADQFDEF 179 (596)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~~~~~~~ 179 (596)
+.-.++++|.+-|++.+....+..+ +++|+..++
T Consensus 123 ---------qYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr 157 (454)
T KOG4332|consen 123 ---------QYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKR 157 (454)
T ss_pred ---------ceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhcc
Confidence 6667899999999999988877765 456665433
No 224
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.49 E-value=8.9e-06 Score=79.87 Aligned_cols=159 Identities=12% Similarity=0.031 Sum_probs=111.6
Q ss_pred HHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 007604 54 SNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCND 133 (596)
Q Consensus 54 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 133 (596)
+.....+++.+|+|+.|...+..+-.++..++ ++.|.+.|++ |.+.++.++.+...+|..++.++..-.
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~--------- 90 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGR--------- 90 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCc---------
Confidence 44555688999999999999999999999875 8889999998 999999999999999998888764211
Q ss_pred CCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcc
Q 007604 134 INSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQ 213 (596)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~ 213 (596)
.+ ..+.+.+.+..++.+.+.+.+..++.....+.||++ ||.+.++.-....+++++-..+...+.
T Consensus 91 -------i~-~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~-------RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 91 -------IP-SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS-------RGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred -------cC-ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc-------cCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 11 124556666666777776666677777778999864 999999977777776665544444443
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHh
Q 007604 214 DDVGWALGYGLPALGLAIAIAIFLA 238 (596)
Q Consensus 214 ~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (596)
....-...+.++....+++++....
T Consensus 156 ~~~~~~fll~la~~~~~v~l~~~~~ 180 (250)
T PF06813_consen 156 GDDPSSFLLFLAVLPAVVCLVAMFF 180 (250)
T ss_pred CCChHHHHHHHHHHHHHHHHHHhhh
Confidence 3322333333444444444444333
No 225
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.44 E-value=2.4e-06 Score=90.59 Aligned_cols=159 Identities=19% Similarity=0.222 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMI 115 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 115 (596)
..+++..++...++....+....|.+-.+|.++.+..........+..++.++...+++|+ |||+++.++.++.+++.+
T Consensus 239 ~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~~~ 317 (467)
T COG2211 239 LLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVGYL 317 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHHHH
Confidence 3344445555555444556667777878898988888888888888888899999999998 999999999999999998
Q ss_pred HHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhh-hhhhhhHHHH
Q 007604 116 VLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEK-AHKLSFFNWW 194 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~ 194 (596)
+..+.. ..+...+++..++.++|.+...+..+++++|..+-.|-+.. ++-|..++.+
T Consensus 318 ~~~f~~----------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 318 LLYFTP----------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred HHHhhc----------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 888764 12677888888999999999999999999999986653222 3345666777
Q ss_pred HHHHHHHHHHhhhhhhhcccccc
Q 007604 195 MFSIFFGTLLGNTVLVYIQDDVG 217 (596)
Q Consensus 195 ~~~~~ig~~l~~~~~~~l~~~~g 217 (596)
.+..-+|.+++..+.|++....|
T Consensus 376 tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 376 TFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 88888888888777666544333
No 226
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.35 E-value=2.2e-06 Score=87.26 Aligned_cols=147 Identities=15% Similarity=0.193 Sum_probs=123.5
Q ss_pred cccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCc
Q 007604 372 PPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQ 451 (596)
Q Consensus 372 ~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (596)
..++.....++..++..|+.+.++|+++.|. .+.+|++++.++.+++++.+
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~i-----------pm~~Gl~vmf~sTilFafg~------------------ 157 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKI-----------PMVAGLFVMFLSTILFAFGN------------------ 157 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhcccc-----------HHHHHHHHHHHHHHHHHHcc------------------
Confidence 4566777789999999999999999888884 38999999999999988853
Q ss_pred ceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchh-HHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCcccc
Q 007604 452 VPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESM-KSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILN 530 (596)
Q Consensus 452 ~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~-rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~ 530 (596)
+++.+++.=.+.|+|...+.+.+.+++++.+|++. ||+++|+.....++|..+||.+.+.+++..
T Consensus 158 ---sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~----------- 223 (464)
T KOG3764|consen 158 ---SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA----------- 223 (464)
T ss_pred ---hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-----------
Confidence 55577778899999999999999999999999776 699999999999999999999999998643
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 007604 531 NLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKA 566 (596)
Q Consensus 531 ~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~ 566 (596)
+.+..|.+.+++.++-..+-+++.+.++..+
T Consensus 224 -----Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 224 -----GKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred -----CCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 3456799999988888777777665544433
No 227
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.34 E-value=1.3e-05 Score=82.89 Aligned_cols=165 Identities=16% Similarity=0.195 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 007604 45 ERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLS 124 (596)
Q Consensus 45 ~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~ 124 (596)
..++++.--..+-+|--+-||++..|+..+......+..++-...|++..|..+++++..++..+.+++..+..++...
T Consensus 220 ~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~- 298 (403)
T PF03209_consen 220 GTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL- 298 (403)
T ss_pred HHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3444444446677788888999999999999999999999999999998866699999989998888888777776532
Q ss_pred CCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHH
Q 007604 125 GLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLL 204 (596)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l 204 (596)
.+.+.+..+.+++|+|.|.+.....+...|...++. -|.+.+.+.....+...+
T Consensus 299 --------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~Gl 352 (403)
T PF03209_consen 299 --------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIARGL 352 (403)
T ss_pred --------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHHHH
Confidence 267788999999999999999999999999998875 889999998888888888
Q ss_pred hhhhhhhccc----------cccchhhhHHHHHHHHHHHHHH
Q 007604 205 GNTVLVYIQD----------DVGWALGYGLPALGLAIAIAIF 236 (596)
Q Consensus 205 ~~~~~~~l~~----------~~g~~~~f~~~~~~~~~~~~~~ 236 (596)
|..++|.+.| ..+|..+|.+-++..++++.+.
T Consensus 353 g~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 353 GTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 8777775532 2357777877777666665543
No 228
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.31 E-value=7.9e-06 Score=89.07 Aligned_cols=184 Identities=11% Similarity=0.047 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhh----hhhHHHHHHHHHHHhhhhhHH----HhhhhcchhHHH--H
Q 007604 35 CSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVK----SANNVTNWGGTIWVTPIFGAG----VAEAYLGRYWTF--V 104 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~----~~~~~~~~~~~~~~~~~~~G~----laD~~~Grk~~~--~ 104 (596)
+..+++...+....+.-..+.++.|.++..+.+... .+++.+.-.+...+.+++..+ +.||..+.+... .
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 344444444555555556676788877665544222 556666666666666666444 444421333333 6
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhh
Q 007604 105 IAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEK 184 (596)
Q Consensus 105 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 184 (596)
+|+++..++.+.+++..... +.....+.+.+.+..++.++|.....|...+++.+..|++.
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~---------------~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~---- 414 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFA---------------DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL---- 414 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhc---------------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH----
Confidence 77888877777766542110 00112377788889999999999999999999999999986
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhc
Q 007604 185 AHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAG 239 (596)
Q Consensus 185 ~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (596)
|++.++.+.....+|..+++.+.....+..+|...|...++..++..++++..
T Consensus 415 --~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 415 --MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888776666678777766665544444444333
No 229
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.30 E-value=0.00019 Score=75.08 Aligned_cols=156 Identities=10% Similarity=0.066 Sum_probs=110.5
Q ss_pred HHHHHHHHhhh-cCCChhhhhhH-HHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 007604 53 SSNLVMYLTDK-LHHGTVKSANN-VTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPP 130 (596)
Q Consensus 53 ~~~l~~yl~~~-lg~~~~~~~~~-~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 130 (596)
-+++..|+.+. .|++..|...- .=...-......++...++|.. |.|++++++.+...+...++....
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~--------- 92 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGT--------- 92 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHC---------
Confidence 36678888876 89999887743 3344556667778888999987 999999999988888777777664
Q ss_pred CCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhh
Q 007604 131 CNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLV 210 (596)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~ 210 (596)
+...+-+.-+.-|++.+. ..+..+++-...|+++ ..++.+....+.-+|..++.+++-
T Consensus 93 ---------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQ 150 (412)
T PF01770_consen 93 ---------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQ 150 (412)
T ss_pred ---------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666677777788887765 5667788888887764 666666666666666666664444
Q ss_pred hccc--cccchhhhHHHHHHHHHHHHHHHhcC
Q 007604 211 YIQD--DVGWALGYGLPALGLAIAIAIFLAGT 240 (596)
Q Consensus 211 ~l~~--~~g~~~~f~~~~~~~~~~~~~~~~~~ 240 (596)
.+.. ..+++...++......+++++.++++
T Consensus 151 llvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 151 LLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3332 34577777777776666666655544
No 230
>PRK11462 putative transporter; Provisional
Probab=98.27 E-value=1.6e-05 Score=86.37 Aligned_cols=153 Identities=12% Similarity=0.072 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 007604 42 EVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSV 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~ 121 (596)
.++..............|.+..+|. +...+.+.+.+.++..++.+++++++||+ |||+++..+..+..+..++..+..
T Consensus 237 ~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~~ 314 (460)
T PRK11462 237 TIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFVP 314 (460)
T ss_pred HHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhc
Confidence 3333333333333344444434443 34455677788889999999999999998 999988765554444333332221
Q ss_pred hccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhh-hhhhHHHHHHHHHH
Q 007604 122 SLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAH-KLSFFNWWMFSIFF 200 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~i 200 (596)
. .+...+++..++.|++.+...+...++.+|..+.++-+...| -+..++...+...+
T Consensus 315 ~----------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Kl 372 (460)
T PRK11462 315 M----------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKL 372 (460)
T ss_pred h----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHH
Confidence 0 123233444556777777777777888999888543222122 34446677788888
Q ss_pred HHHHhhhhhhhccccccc
Q 007604 201 GTLLGNTVLVYIQDDVGW 218 (596)
Q Consensus 201 g~~l~~~~~~~l~~~~g~ 218 (596)
|..+|+.++|++.+..||
T Consensus 373 g~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 373 GLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 998888887776544344
No 231
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.26 E-value=2.2e-05 Score=78.40 Aligned_cols=145 Identities=19% Similarity=0.295 Sum_probs=109.2
Q ss_pred HHHHHHHhhhcCCCh--hhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC
Q 007604 54 SNLVMYLTDKLHHGT--VKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPC 131 (596)
Q Consensus 54 ~~l~~yl~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (596)
...+.+.. .++.+. ...++..+.+.+...++.++.|.++||+ |||+.+..+.....++.+++.+..+
T Consensus 23 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------- 91 (338)
T COG0477 23 PALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN--------- 91 (338)
T ss_pred HHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc---------
Confidence 34444443 445444 5788999999999999999999999999 9998888887765566555555421
Q ss_pred CCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCC-CChhhhhhhhhhHHHHHH-HHHHHHHHhhhhh
Q 007604 132 NDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDE-FEPKEKAHKLSFFNWWMF-SIFFGTLLGNTVL 209 (596)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~ig~~l~~~~~ 209 (596)
.....+.+.|++.|++.+...+...+++.|.+|+ + +|+...+.... ...+|..++|.++
T Consensus 92 -------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (338)
T COG0477 92 -------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEAT------ERGLAVGLVTLGAGALGLALGPLLA 152 (338)
T ss_pred -------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchh------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1577788889999999999999999999999997 3 38888888777 5778888888776
Q ss_pred hhcccc--ccchhhhHHHHHH
Q 007604 210 VYIQDD--VGWALGYGLPALG 228 (596)
Q Consensus 210 ~~l~~~--~g~~~~f~~~~~~ 228 (596)
+.+... .+|+..|.+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 153 GLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHhcchHHHHHHHHHH
Confidence 665543 5788866555543
No 232
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.26 E-value=1.3e-05 Score=83.12 Aligned_cols=167 Identities=14% Similarity=0.109 Sum_probs=125.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh---cchhHHHHHHH-H
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY---LGRYWTFVIAF-F 108 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~~~~~~~-~ 108 (596)
+.++.+....+...+++-.=.++++.|++ ++|.+-...+.+-.+.-+...+.+|+.|..+||+ +||||-++... .
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 56667777777778887777788999987 8999999999999999999999999999999987 68888776554 4
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhh
Q 007604 109 FYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKL 188 (596)
Q Consensus 109 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (596)
..+++..+...+.++.... |.+--+...+.....++++..+.-++....+..+-++.+|....++ ++.
T Consensus 111 ~i~~~l~Lig~aaDig~~l-------gd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~-----~~~ 178 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLL-------GDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA-----KKT 178 (498)
T ss_pred HHHHHHhhhhhHhhhhHHh-------cCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh-----hhh
Confidence 5667777776665432111 1111111222456677788888888988899999999999998775 122
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhc
Q 007604 189 SFFNWWMFSIFFGTLLGNTVLVYI 212 (596)
Q Consensus 189 ~~~~~~~~~~~ig~~l~~~~~~~l 212 (596)
++.+++...+.+|+.+|...+++.
T Consensus 179 ~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 179 RANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred ccchhHHHHHHhcceeeeeccccc
Confidence 289999999999999998777754
No 233
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.25 E-value=1.9e-05 Score=81.02 Aligned_cols=154 Identities=17% Similarity=0.113 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHH
Q 007604 36 SFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMI 115 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~ 115 (596)
....+..|+---.--.+-++++.|+.+..|++..+++..++.+..+.++|...+-++-.|+ ...|.+.+..++..+-.+
T Consensus 239 ~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~ 317 (422)
T COG0738 239 RLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLL 317 (422)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Confidence 3333333433233334558899999988999999999999999999999999999999998 777777766655444444
Q ss_pred HHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHH
Q 007604 116 VLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWM 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (596)
..++.. +. .-+.+.++.|+..+...|++.++..+..|++. +.++. .-
T Consensus 318 ~~~l~~------------------------g~-v~~~~l~~ig~F~simfPTIfslal~~l~~~t-----s~~s~---~l 364 (422)
T COG0738 318 AVALIG------------------------GV-VALYALFLIGLFNSIMFPTIFSLALKNLGEHT-----SVGSG---LL 364 (422)
T ss_pred HHHHhc------------------------Ch-HHHHHHHHHHHHhHHHHHHHHHHHHhccCccc-----cccce---ee
Confidence 444442 32 23345678899999999999999999999543 23332 23
Q ss_pred HHHHHHHHHhhhhhhhccccccchhhhH
Q 007604 196 FSIFFGTLLGNTVLVYIQDDVGWALGYG 223 (596)
Q Consensus 196 ~~~~ig~~l~~~~~~~l~~~~g~~~~f~ 223 (596)
.+.-+|+++-|.+.|++.|..|-...+.
T Consensus 365 ~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 365 VMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred eeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 3456899999999999999988776665
No 234
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.13 E-value=5.6e-06 Score=89.53 Aligned_cols=165 Identities=14% Similarity=0.106 Sum_probs=114.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhh---cchhHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAY---LGRYWTFVIAFFF 109 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grk~~~~~~~~~ 109 (596)
+..|...+..++.....|++..++|.|+++..|++..+++.+...+.++..++.+++|+++||. ..+|..+...+.+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4588899999999999999999999999986789999999999999999999999999999993 2777777766655
Q ss_pred HH-HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhh
Q 007604 110 YL-MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKL 188 (596)
Q Consensus 110 ~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (596)
+. +|.+.+.... .......+.+....+.+...+++..-..+....+. ||-
T Consensus 353 ~~~~g~~~l~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-----k~~ 403 (495)
T KOG2533|consen 353 YAIIGAISLLAAA------------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-----KAL 403 (495)
T ss_pred HHHHHHHHHHhhc------------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----HhH
Confidence 44 3433333321 23333333334444455555666666677766554 466
Q ss_pred hhHHHHHHHHHHHHHHh-hhhhhhccccccchhhhHHHH
Q 007604 189 SFFNWWMFSIFFGTLLG-NTVLVYIQDDVGWALGYGLPA 226 (596)
Q Consensus 189 ~~~~~~~~~~~ig~~l~-~~~~~~l~~~~g~~~~f~~~~ 226 (596)
+..+.+..+.+.+++++ ++..+.....++|...|+...
T Consensus 404 ~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 404 TTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred HHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 66666655555554444 444455555678888884433
No 235
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.10 E-value=0.0019 Score=67.68 Aligned_cols=61 Identities=13% Similarity=0.157 Sum_probs=52.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhh
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTV 515 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i 515 (596)
++|.+++..+.-|+..+..++..+..+.+..|++.|..++|.......+|..++..+.-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 5666666778889999999999999999999999999999999999999998888876444
No 236
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.09 E-value=4e-05 Score=83.11 Aligned_cols=139 Identities=12% Similarity=0.100 Sum_probs=92.9
Q ss_pred cccchhHHHHHHHHHHhHHHHHh-hhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCccee
Q 007604 376 LTGFVTLSMLVCVVLYDRCFVRI-TRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPL 454 (596)
Q Consensus 376 ~~~~~~~~~~i~~~l~~~~~~~l-~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (596)
+.........+..++.+++.||+ +|| +.+.+|.++.+++.+..+... .
T Consensus 50 i~~~~~~~~~l~~ligG~LaDRilGrr-----------r~iliG~il~~lg~lll~~~~--------------------~ 98 (493)
T PRK15462 50 LFSAYCSLVYVTPILGGFLADKVLGNR-----------MAVMLGALLMAIGHVVLGASE--------------------I 98 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcH-----------HHHHHHHHHHHHHHHHHHHhh--------------------c
Confidence 34444556666777888888887 766 447778888777765544321 1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccch--hHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCC
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPES--MKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNL 532 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~--~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~ 532 (596)
+...+.....+..+|.+...+...+++.|.+|++ .|.++.+++.....+|+.+++.+.+.+.+.
T Consensus 99 ~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~-------------- 164 (493)
T PRK15462 99 HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE-------------- 164 (493)
T ss_pred chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh--------------
Confidence 1122333444555667777777788999999976 799999999999999999999999988541
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007604 533 NVCHLDYYYAFFAILNVLNFVFFLVVAKF 561 (596)
Q Consensus 533 ~~~~~~~~f~~~~~~~~v~~~~~~~~~~~ 561 (596)
.++++.|.+.++..+++++.++...++
T Consensus 165 --~Gw~~~F~iaaigm~l~li~~~~~~~~ 191 (493)
T PRK15462 165 --YSWAMGFGLAAVGMIAGLVIFLCGNRH 191 (493)
T ss_pred --hChHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 134566776655555555555444433
No 237
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.08 E-value=0.00013 Score=78.72 Aligned_cols=207 Identities=9% Similarity=-0.034 Sum_probs=138.4
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCChh------h----hhhHHHHHHHHHHHhhhhhHHHhhh
Q 007604 27 SKRGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDK-LHHGTV------K----SANNVTNWGGTIWVTPIFGAGVAEA 95 (596)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-lg~~~~------~----~~~~~~~~~~~~~~~~~~~G~laD~ 95 (596)
..+..++.++.++.++++..++++....+.+.|+.++ ++-++. + ..+....+.+...+..++--++.++
T Consensus 252 ~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~ 331 (477)
T TIGR01301 252 AFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG 331 (477)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466778899999999999999999999988888753 443221 1 1233444555555666777788988
Q ss_pred hcch-hHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCC-ccccccccchhHHHHHHHHHHHHhccCcccchhhhhh
Q 007604 96 YLGR-YWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINS-QDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAA 173 (596)
Q Consensus 96 ~~Gr-k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 173 (596)
+ |+ |++..++.++.+++.+...+..+..... .+.++ +.--.+........++...+.|+..+.....-.++++
T Consensus 332 ~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s 406 (477)
T TIGR01301 332 W-GAGKRLWGIVNIILAICLAATVLVTYVAKNS----RYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALAS 406 (477)
T ss_pred h-ccchhHHHHHHHHHHHHHHHHHHHHhhhhcc----ccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHH
Confidence 7 95 6776888888888887776543211000 00000 0000000011355666677789999998899999999
Q ss_pred ccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccccc--chhhhHHHHHHHHHHHHHHHhcCCc
Q 007604 174 DQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVG--WALGYGLPALGLAIAIAIFLAGTPF 242 (596)
Q Consensus 174 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (596)
+..+++. .+.|..+|+++.++.+...+..+..|.+.+..| -.+++.++++..+++.+..+...|+
T Consensus 407 ~~~~~~~----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 407 IRSSNLG----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred HHccccC----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999543 137999999999999999998877776544443 4567777887777777666655554
No 238
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.04 E-value=4.4e-05 Score=83.46 Aligned_cols=109 Identities=8% Similarity=0.126 Sum_probs=83.4
Q ss_pred cchhHHHHHHHHHHhHHHHH-hhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehh
Q 007604 378 GFVTLSMLVCVVLYDRCFVR-ITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTI 456 (596)
Q Consensus 378 ~~~~~~~~i~~~l~~~~~~~-l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (596)
........+..++.+++.|+ ++|| +.+.+|.++.+++.+..++.. ...
T Consensus 57 ~~~~~~~~~~~~~~G~laDr~~G~r-----------~~~~~g~~~~~~g~~~~~~~~--------------------~~~ 105 (489)
T PRK10207 57 GAFAALVYGLISIGGYVGDHLLGTK-----------RTIVLGAIVLAIGYFMTGMSL--------------------LKP 105 (489)
T ss_pred HHHHHHHHHHHhhHHHhhhhccchH-----------HHHHHHHHHHHHHHHHHHHhc--------------------cch
Confidence 33444555666788888887 7777 558888888888877766532 111
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHhhccchh--HHHHHHHHHHHHhHHHHHHhHHHhhhhc
Q 007604 457 FIMLPQFVLMGTADAFLEVAKIEFFYDQAPESM--KSLGTSYSMTTLGVGNFLSSFLLSTVSD 517 (596)
Q Consensus 457 ~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~--rg~~~g~~~~~~~ig~~lg~~~~~~i~~ 517 (596)
..+....+++++|.++..|...+++.|++|++. |+.+.+++.+...+|..+|+.+.+.+.+
T Consensus 106 ~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~ 168 (489)
T PRK10207 106 DLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD 168 (489)
T ss_pred hHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 223356678899999999999999999998774 5778999999999999999999998864
No 239
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.01 E-value=1.4e-05 Score=87.01 Aligned_cols=135 Identities=12% Similarity=-0.029 Sum_probs=106.5
Q ss_pred hhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcccc
Q 007604 61 TDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCR 140 (596)
Q Consensus 61 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (596)
.+.+|+++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++.+++.+....... .++
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~---------------~~~ 343 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVK---------------RWN 343 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeee---------------ccc
Confidence 357899999999999999999999999999999998 9999999999888887755432110 000
Q ss_pred ccc-cchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccccc
Q 007604 141 KAS-TLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVG 217 (596)
Q Consensus 141 ~~~-~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g 217 (596)
... ..+...+....++.+++.+........++.+..|++. +++.++++....++|..+++.+++++.+..|
T Consensus 344 ~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 344 LAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred cccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 000 0022234445667788888888888999999999997 9999999999999999999999998887766
No 240
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.00 E-value=2.2e-05 Score=83.02 Aligned_cols=173 Identities=9% Similarity=-0.028 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHH
Q 007604 38 VVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVL 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~ 117 (596)
.++..++..++.--+.+++--+++ +++-.+.-.|.+...-..+-++.-++.+++..++ |+-+++..++.++.+=.+..
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~ 453 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYY 453 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHH
Confidence 344445555555445555544444 6676777777666666778888899999999998 99999999999988888777
Q ss_pred HHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHH-
Q 007604 118 ALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMF- 196 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~- 196 (596)
+... |.|+....-+++|+..+..+.++.+|+.+..|++- |.++-++.+.
T Consensus 454 S~L~------------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~ 503 (618)
T KOG3762|consen 454 SYLQ------------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGI 503 (618)
T ss_pred HHhc------------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHH
Confidence 7664 78888888999999999999999999999999996 8888887554
Q ss_pred HHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCc
Q 007604 197 SIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPF 242 (596)
Q Consensus 197 ~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (596)
.-.+|-.+|.+++|.+...+|-|..|++.++..++.++.+....+.
T Consensus 504 f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 504 FHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred hcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4478888999999999999999999998887776666655544433
No 241
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.99 E-value=0.0061 Score=65.69 Aligned_cols=166 Identities=8% Similarity=-0.021 Sum_probs=99.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-----hhhhhhHHHHHHHHHHHh-hhhhHHHhhhhcchhHHH
Q 007604 30 GGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHG-----TVKSANNVTNWGGTIWVT-PIFGAGVAEAYLGRYWTF 103 (596)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~-----~~~~~~~~~~~~~~~~~~-~~~~G~laD~~~Grk~~~ 103 (596)
..+++++...+..||..+.|+ ..--++|.+..+ .....++-+...+...+. .++-+++++|+ +|++.+
T Consensus 4 ~E~~k~~~~~l~fF~il~~Y~-----iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf 77 (472)
T TIGR00769 4 HELKKFLPLFLMFFCILFNYT-----ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALF 77 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHH-----HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhH
Confidence 345667767676666666554 233456777663 245666666554444444 78889999998 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCcc---cccc----------ccchhHHHHHHHHHHHHhccCccc-chh
Q 007604 104 VIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQD---CRKA----------STLQLGTFFAALYTLAVGTGGTKP-NIL 169 (596)
Q Consensus 104 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----------~~~~~~~~~~~~~l~g~g~g~~~~-~~~ 169 (596)
.+....+....++.++.-. |. ++...+-...+ ...+ .++....+++ ...+-.....+ ..+
T Consensus 78 ~~~~~~F~~~f~lF~~vl~-p~--~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv---~~elw~~~vvS~lFW 151 (472)
T TIGR00769 78 YTVISPFLGFFALFAFVIY-PL--SDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYV---MAELWGSVVLSLLFW 151 (472)
T ss_pred HHHHHHHHHHHHHHHHHHh-cc--hhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHH---HHHHHHHHHHHHHHH
Confidence 9887777776666655420 10 00000000000 0000 0111112222 22222222333 778
Q ss_pred hhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcc
Q 007604 170 TIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQ 213 (596)
Q Consensus 170 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~ 213 (596)
++..|.++.++ -.+.++++..+.|+|..+++.+..++.
T Consensus 152 ~fandi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 152 GFANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999886 889999999999999999998888765
No 242
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.98 E-value=4.8e-05 Score=60.35 Aligned_cols=65 Identities=15% Similarity=0.151 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHH
Q 007604 43 VFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF 109 (596)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 109 (596)
++...+.-.+.++++.|++ +.|+++.++|.+.++..+...+++++.|+++||+ ||++.++....+
T Consensus 10 f~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 3344444556788999988 6999999999999999999999999999999999 988887766544
No 243
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.97 E-value=0.00014 Score=79.96 Aligned_cols=145 Identities=12% Similarity=0.058 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHHHhhh--cCCCh------hhhhhHHHHHHHHHHHhhhhh----HHHhhhhcchhHHHHHHHHHHH
Q 007604 44 FERMAYHGISSNLVMYLTDK--LHHGT------VKSANNVTNWGGTIWVTPIFG----AGVAEAYLGRYWTFVIAFFFYL 111 (596)
Q Consensus 44 ~~~~~~~~~~~~l~~yl~~~--lg~~~------~~~~~~~~~~~~~~~~~~~~~----G~laD~~~Grk~~~~~~~~~~~ 111 (596)
.....+|.+...++.++... .+.+. ...+++.+.-.+...+..++. +++.||. +..+.+.+++++.+
T Consensus 283 ~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l~~ 361 (500)
T PRK09584 283 LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVLCS 361 (500)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHHHH
Confidence 44455666666666665431 11111 123344444554555555555 5556665 66688889999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhH
Q 007604 112 MGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFF 191 (596)
Q Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (596)
++.+.++....... ..+..+.+.+.+..++.++|.++..|...+++.+..|++. |++.+
T Consensus 362 l~f~~l~~~~~~~~---------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~~ 420 (500)
T PRK09584 362 GAFLVLPLGAKFAN---------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFIM 420 (500)
T ss_pred HHHHHHHHHHHhcC---------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHHH
Confidence 99888777642110 0111245567888999999999999999999999999986 99999
Q ss_pred HHHHHHHHHHHHHhhhhhh
Q 007604 192 NWWMFSIFFGTLLGNTVLV 210 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~ 210 (596)
+.+.....+|..++..+.+
T Consensus 421 g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 421 GSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9988877777777765654
No 244
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.95 E-value=1.1e-07 Score=102.84 Aligned_cols=186 Identities=11% Similarity=0.016 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH
Q 007604 34 ACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG 113 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~ 113 (596)
.....+....+..+..+....+...++.+..+.+.. -.......+...++.+++.++.||+ |||++++.+..+.+++
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 344444444444444433344444455556676666 2223344566777888888999998 9999999998887777
Q ss_pred HHHHH-HHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 114 MIVLA-LSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 114 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
.+.+. ....... .+...+...+....+.......+..+....+.+|.+|.+. |.++.+
T Consensus 330 ~~~~~~~~~~~~~---------------~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~ 388 (451)
T PF00083_consen 330 SLILGIIFFLGVS---------------SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIG 388 (451)
T ss_pred ccccccccccccc---------------cccccccccceeeeeccccccccccccccccccccccccc------cccccc
Confidence 66664 1110000 0000011111111111112222345677788999999997 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHHHHhcCCce
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAIFLAGTPFY 243 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 243 (596)
+.+....+++.+++.+..++.+..+-...+.+.+...++..+..+...|+.
T Consensus 389 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET 439 (451)
T PF00083_consen 389 LSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPET 439 (451)
T ss_pred cccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeC
Confidence 988888899999988888887766633455555544444444444444443
No 245
>PTZ00207 hypothetical protein; Provisional
Probab=97.92 E-value=0.00036 Score=77.17 Aligned_cols=130 Identities=10% Similarity=0.116 Sum_probs=91.4
Q ss_pred HHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHH
Q 007604 387 CVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLM 466 (596)
Q Consensus 387 ~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~ 466 (596)
+.++.+++.|++++| +.+.+|.++.+++.++.++.... ....+.+.+.+..++.
T Consensus 77 ~~lp~G~L~Dr~G~R-----------~vllig~ll~~iG~ll~ala~~~---------------~i~~s~~~l~l~r~l~ 130 (591)
T PTZ00207 77 FLLPYSFIYDYLGPR-----------PIFVLSMTVFCLGTLLFALTFQE---------------VIEGSVVRLSVYNGLM 130 (591)
T ss_pred HHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHHhcc---------------cccCcHHHHHHHHHHH
Confidence 344567777777766 55888888888888777764210 0013667777778899
Q ss_pred HHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHH
Q 007604 467 GTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAI 546 (596)
Q Consensus 467 g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~ 546 (596)
|+|.+..++.....+.+.+| +.||+++|+.....++|+.+.+.+...+.. .+...++++.++
T Consensus 131 G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-----------------~~~~~~fl~l~v 192 (591)
T PTZ00207 131 TLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-----------------DNTSAYFFFLMS 192 (591)
T ss_pred HHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HhHHHHHHHHHH
Confidence 99999999988888999887 789999999999999999865554444331 123456777777
Q ss_pred HHHHHHHHHHHHhh
Q 007604 547 LNVLNFVFFLVVAK 560 (596)
Q Consensus 547 ~~~v~~~~~~~~~~ 560 (596)
+.++..++.+.+.+
T Consensus 193 l~~vv~ll~~~~vr 206 (591)
T PTZ00207 193 FALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHhhee
Confidence 77666555555544
No 246
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.90 E-value=0.00021 Score=78.68 Aligned_cols=139 Identities=16% Similarity=0.279 Sum_probs=100.0
Q ss_pred ccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcc
Q 007604 373 PASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQV 452 (596)
Q Consensus 373 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (596)
..++...+.+...+..|+++++.|.++||+. +.+|.++..++.++.+-.
T Consensus 80 ~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~-----------~i~g~~l~vvG~Iv~atA-------------------- 128 (599)
T PF06609_consen 80 WSWFSTAWTLASAVSFPFVGRLSDLFGRRYF-----------FIIGSLLGVVGSIVCATA-------------------- 128 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHHhcchHH-----------HHHHHHHHHhHHHHhhcC--------------------
Confidence 3456667788888999999999999999952 777788888887776643
Q ss_pred eehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCC
Q 007604 453 PLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNL 532 (596)
Q Consensus 453 ~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~ 532 (596)
.+...++....+.|+|.+.... ....+.|..|.+.|+.+.++.....-+....++.+...+.. +.+|
T Consensus 129 -~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~------~~~W----- 195 (599)
T PF06609_consen 129 -QNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA------HSGW----- 195 (599)
T ss_pred -CcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc------CCCc-----
Confidence 2556778888999998766654 45568999999999988877776555555566666555432 2344
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhh
Q 007604 533 NVCHLDYYYAFFAILNVLNFVFFLVVAK 560 (596)
Q Consensus 533 ~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 560 (596)
-|.|++.+++..+++++.+++.+
T Consensus 196 -----Rw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 196 -----RWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred -----chHHHHHHHHHHHHHHHHHHHhC
Confidence 46677777777777666555544
No 247
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.88 E-value=2.8e-05 Score=80.78 Aligned_cols=181 Identities=13% Similarity=0.082 Sum_probs=123.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhh--------HHHHHHH-HHHHhhhhhHHHhhhhcchhHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSAN--------NVTNWGG-TIWVTPIFGAGVAEAYLGRYWTF 103 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~--------~~~~~~~-~~~~~~~~~G~laD~~~Grk~~~ 103 (596)
+.++..+...|..-+++|+...+...-++ ..|+.+.+... ...+... +...+..+..++.|++ |||+..
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 55667788888888888877665555444 45554443332 1122222 2333666778889998 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhh
Q 007604 104 VIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKE 183 (596)
Q Consensus 104 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 183 (596)
+-+.+++.+..+.++...+- ..+ ....+...-+.+-++.-+...+.-.+-+|.||.+.
T Consensus 382 ~~GF~~~~i~~~~~~~~y~~-----------------~~~--~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv--- 439 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYNQ-----------------LEN--TIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV--- 439 (538)
T ss_pred HhhHHHHHHHHHHHcCCccc-----------------ccc--cCceeehHHHHHHHHhcCCCceeEEeehhhchHHH---
Confidence 99999998888777654320 001 11111111222334444555566677899999997
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhhhhhhhccc-----cccchhhhHHHHHHHHHHHHHHHhcC
Q 007604 184 KAHKLSFFNWWMFSIFFGTLLGNTVLVYIQD-----DVGWALGYGLPALGLAIAIAIFLAGT 240 (596)
Q Consensus 184 ~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~-----~~g~~~~f~~~~~~~~~~~~~~~~~~ 240 (596)
|+..-++...+.-.|+++|.....++.+ ..|.+.+|++.+.+.+++++..++..
T Consensus 440 ---R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 440 ---RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred ---hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence 9999999999999999999999999988 77899999999888887776654433
No 248
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.81 E-value=9.2e-05 Score=83.47 Aligned_cols=135 Identities=17% Similarity=0.138 Sum_probs=97.2
Q ss_pred ccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhh----hhh-------h-h
Q 007604 373 PASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERY----RLS-------V-A 440 (596)
Q Consensus 373 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~----~~~-------~-~ 440 (596)
.+.+.+...++.++..+++.++.+|.+|| +.+++|.++++++.++.++.+.. ..+ . .
T Consensus 70 ~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----------~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 70 SGLINGSYEIGNLLLIIFVSYFGTKLHRP-----------IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred ceeeeehhhHHHHHHHHHHHHhhcccCcc-----------eEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 46667778888888888888877776666 33777888888888777765410 000 0 0
Q ss_pred --hccCcccc---------------CCcc-eehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHh
Q 007604 441 --KDHGIVEK---------------GQQV-PLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLG 502 (596)
Q Consensus 441 --~~~~~~~~---------------~~~~-~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ 502 (596)
+..-|... .+.. ...+..+++.-++.|+|.+...+...+++.|.+|++.|+.+.|+++....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 00011100 0000 12344566778999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHhhhhcc
Q 007604 503 VGNFLSSFLLSTVSDI 518 (596)
Q Consensus 503 ig~~lg~~~~~~i~~~ 518 (596)
+|..+|+.+.+.+...
T Consensus 219 iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQI 234 (633)
T ss_pred hhhHHHHHHHHHHHhc
Confidence 9999999999888753
No 249
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.78 E-value=7.6e-05 Score=75.93 Aligned_cols=112 Identities=16% Similarity=0.164 Sum_probs=89.2
Q ss_pred ccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcc
Q 007604 373 PASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQV 452 (596)
Q Consensus 373 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (596)
.+.+.+...+...+..|+.+.+.|+++|| ..+.+|.+..+++.+.++..
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRk-----------pvll~c~~~va~s~ll~~~S-------------------- 118 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRK-----------PVLLACLIGVALSYLLWALS-------------------- 118 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCch-----------HHHHHHHHHHHHHHHHHHHH--------------------
Confidence 35556667888899999999999999999 34777777777777777653
Q ss_pred eehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhc
Q 007604 453 PLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSD 517 (596)
Q Consensus 453 ~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~ 517 (596)
-+...++..=++.|+..+-..+. .+++.|.++++.|+.+++...+..++|..+||.+.+++..
T Consensus 119 -~~F~afv~aR~l~Gi~kgnl~v~-rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 119 -RNFAAFVLARFLGGIFKGNLSVI-RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred -HHHHHHHHHHHhhhhccCchHHH-HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 23334444467778877766654 5899999999999999999999999999999999998864
No 250
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.76 E-value=0.00042 Score=76.44 Aligned_cols=151 Identities=7% Similarity=-0.031 Sum_probs=91.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHH
Q 007604 31 GWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFY 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~ 110 (596)
.++.....+....+.+++-+....+....+-+..|.+... .....+..+...++..++.++.||+ |||+.++.+...+
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~m 369 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAGM 369 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHHH
Confidence 4455555555566665555444433334444566666443 5555566777888888889999998 9999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhh
Q 007604 111 LMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSF 190 (596)
Q Consensus 111 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (596)
.++.++++........... .........+....+.......+..|..+.+.+|.+|.+- |+.+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------r~~~ 432 (513)
T KOG0254|consen 370 SICLVILAVVGVFALYYPN-----------SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------RSKG 432 (513)
T ss_pred HHHHHHHHHHHHHhccCCC-----------cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------Hhhh
Confidence 9999888876432211000 0000112222222222333334445677788999999986 8888
Q ss_pred HHHHHHHHHH
Q 007604 191 FNWWMFSIFF 200 (596)
Q Consensus 191 ~~~~~~~~~i 200 (596)
.++......+
T Consensus 433 ~s~~~~~n~~ 442 (513)
T KOG0254|consen 433 ASLAVAVNWL 442 (513)
T ss_pred HHHHHHHHHH
Confidence 7774444333
No 251
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.74 E-value=0.0012 Score=70.41 Aligned_cols=109 Identities=16% Similarity=0.140 Sum_probs=88.6
Q ss_pred cccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcce
Q 007604 374 ASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVP 453 (596)
Q Consensus 374 ~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (596)
+.+......+-.+....++++.|+++-| +.+.++++..++..++.++..
T Consensus 65 G~I~s~F~ysYal~qIp~GlLaDrlG~K-----------~vL~l~~l~Wsl~t~L~~fa~-------------------- 113 (511)
T TIGR00806 65 NEIIPVLPYSHLAVLVPVFLLTDYLRYK-----------PVLVLQALSFVCVWLLLLLGT-------------------- 113 (511)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCch-----------HHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 3444555566666777777777777766 447777777777777776642
Q ss_pred ehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhh
Q 007604 454 LTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTV 515 (596)
Q Consensus 454 ~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i 515 (596)
+.+.+.+.-+++|++++... +...+++..+|++.|++++|+++....+|.++++.+.+.+
T Consensus 114 -Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 114 -SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred -HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888899999999999 9999999999999999999999999999999999999984
No 252
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.67 E-value=0.033 Score=59.42 Aligned_cols=59 Identities=15% Similarity=0.194 Sum_probs=47.0
Q ss_pred ehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHH
Q 007604 454 LTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLL 512 (596)
Q Consensus 454 ~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~ 512 (596)
.+...++...++--+|.=.......-++.|.+|++.||...|+-+..+.+-..+.-.++
T Consensus 354 ~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 354 ISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556666777777777888889999999999999999999998888877766553
No 253
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.62 E-value=0.032 Score=57.14 Aligned_cols=159 Identities=14% Similarity=0.112 Sum_probs=90.7
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhh-----hhcchhHH
Q 007604 28 KRGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAE-----AYLGRYWT 102 (596)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD-----~~~Grk~~ 102 (596)
.|+..++++.+.+.......- +|....+|..++ .-|.|-++.+....++ .=+..-+++..+.| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP-~GL~~~iP~lL~-ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIP-LGLIGAIPLLLQ-AKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCc-hhHhhhhHHHhc-CCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 455567788777776665443 566666666555 5566666555433222 22334556677777 87 99997
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChh
Q 007604 103 FVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPK 182 (596)
Q Consensus 103 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 182 (596)
-++- +-+.+|.....++...+ +...-|+.++ +...+....++.-+..+.--.++-...-.+..+++
T Consensus 101 Wvvp-~q~llG~~mllLs~~v~-----~~~g~ng~~p------~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~-- 166 (510)
T KOG3574|consen 101 WVVP-CQYLLGLFMLLLSYLVD-----RGLGGNGGLP------NVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN-- 166 (510)
T ss_pred eeee-hHHHHHHHHHHHhhCCC-----cccccCCCCc------chHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh--
Confidence 5542 22344444444443211 1111011112 33334344455666666666666666667777665
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhhhhh
Q 007604 183 EKAHKLSFFNWWMFSIFFGTLLGNTVL 209 (596)
Q Consensus 183 ~~~~r~~~~~~~~~~~~ig~~l~~~~~ 209 (596)
.+-+......+.+.|.+++..+.
T Consensus 167 ----lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 167 ----LGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred ----cCchhHHHHHHHhhhHHhhccee
Confidence 77777777778888888887554
No 254
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.52 E-value=0.0012 Score=70.62 Aligned_cols=161 Identities=14% Similarity=0.111 Sum_probs=106.1
Q ss_pred cccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcce
Q 007604 374 ASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVP 453 (596)
Q Consensus 374 ~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (596)
+++.+...++..+..|+.++...|...- ++| +.+|.+++.++-+++...+.. +
T Consensus 74 G~viaa~slg~~i~~liF~~Ws~k~~~~--k~P--------li~s~ii~~~g~llY~~l~~~-----------------~ 126 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWSNKTGSV--KKP--------LIVSFLIAIIGNLLYLALAYV-----------------P 126 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccccccCCc--ccC--------HHHHHHHHHHHHHHHHHHHhc-----------------c
Confidence 4555667888888889888865444432 233 889999999998888444321 2
Q ss_pred e-hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCcccc-C
Q 007604 454 L-TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILN-N 531 (596)
Q Consensus 454 ~-~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~-~ 531 (596)
. ..+++.++.++.|+|.+.... .-.|+++..-.+.|-++++..+....+|..+||.+...+..+.+.. ..|+++ .
T Consensus 127 ~~~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G--~~i~~~~~ 203 (488)
T KOG2325|consen 127 NGVKYLMLVARILTGVGVGNFAV-LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKG--FMILPGLI 203 (488)
T ss_pred cchHHHHHHHHHHcCcCcccHHH-HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCc--eEEcCcce
Confidence 2 556777788999998655443 4578888777777888888887777788888887777765444211 122221 2
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 007604 532 LNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKA 566 (596)
Q Consensus 532 ~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~ 566 (596)
.| .+...=|+++++.++..++...+.++..+..
T Consensus 204 ~n--~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 204 FN--MYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred EE--ecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 22 2344567777887878777777777654443
No 255
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.36 E-value=0.0049 Score=56.05 Aligned_cols=111 Identities=13% Similarity=0.083 Sum_probs=84.0
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccch
Q 007604 67 GTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQ 146 (596)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (596)
++.....-.++.+....+..++.+.+.+++ |.|++++++.+.+.+-.+.... .+
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~-------------------------~~ 88 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY-------------------------PN 88 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh-------------------------hh
Confidence 334444456667777888888889999997 9999999998887754433322 16
Q ss_pred hHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhh
Q 007604 147 LGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVL 209 (596)
Q Consensus 147 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~ 209 (596)
.+.++.+-.+.|+|.+..+.+.-.++.+..+++. |++..+++......+..+|.++.
T Consensus 89 ~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 89 SYTLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHH
Confidence 6778889999999999999999999998887764 78877776666666666665443
No 256
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.34 E-value=0.0023 Score=70.74 Aligned_cols=129 Identities=14% Similarity=0.203 Sum_probs=98.2
Q ss_pred ccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCccee
Q 007604 375 SLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPL 454 (596)
Q Consensus 375 ~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (596)
...++..++.+++..+.+.+.|+++|| ..+..++++..++-+..++. .
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk-----------~~~~~~~~~~~i~~~~~a~a---------------------~ 169 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRK-----------PVLLVSLLLFIIFGILTAFA---------------------P 169 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccH-----------HHHHHHHHHHHHHHHHHHHh---------------------C
Confidence 345566777777777778878888887 33666666666665555553 4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcc
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNV 534 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~ 534 (596)
+++.+++.-++.|++........+.+..|..+++.|+.+..+ ......++.+++....++.. +|
T Consensus 170 ~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~W------- 233 (521)
T KOG0255|consen 170 NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DW------- 233 (521)
T ss_pred cHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hH-------
Confidence 777888888999999999999999999999999999999999 88888888888888777752 33
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 007604 535 CHLDYYYAFFAILNVLNFVF 554 (596)
Q Consensus 535 ~~~~~~f~~~~~~~~v~~~~ 554 (596)
.+.+++..+..++.+++
T Consensus 234 ---r~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 234 ---RWLFWIISIPSGLFLLL 250 (521)
T ss_pred ---HHHHHHHHHHHHHHHHH
Confidence 56677766666655554
No 257
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.24 E-value=0.0021 Score=67.19 Aligned_cols=186 Identities=11% Similarity=-0.003 Sum_probs=110.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHH
Q 007604 33 RACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLM 112 (596)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i 112 (596)
+.+.+++++..+.-..+++....+-.-+. .-|.+...+|.+.....++.+++.+++|.++||..+-|+++++......+
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l~-~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v 344 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLALC-PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALV 344 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhccc-cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Confidence 34566666666666666666555543332 45777789999999999999999999999999995566666666666666
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHH
Q 007604 113 GMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFN 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (596)
+...+...+..+ .....++.--.+.|+...+..|.-.-+..|..-+.. -+.-.|
T Consensus 345 ~~~~l~~~t~~~--------------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~------E~tSsG 398 (480)
T KOG2563|consen 345 GTLMLLTCTLFL--------------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVA------EGTSSG 398 (480)
T ss_pred HHHHHHHhhccC--------------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccC------Ccccce
Confidence 642222222111 134445555666777777777877777777654443 233444
Q ss_pred HHHHHHHHHHHHhhhhhhhcccccc----chhhhHHHHHHHHHHHHHHHhcCCceec
Q 007604 193 WWMFSIFFGTLLGNTVLVYIQDDVG----WALGYGLPALGLAIAIAIFLAGTPFYRH 245 (596)
Q Consensus 193 ~~~~~~~ig~~l~~~~~~~l~~~~g----~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 245 (596)
+.+...++-+.+-..+-+...+..+ |...-+.......++.++..+.++++++
T Consensus 399 ll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 399 LLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred eEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 4444444444444445555555554 3333333334444555555566665544
No 258
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.98 E-value=0.0031 Score=67.97 Aligned_cols=153 Identities=14% Similarity=0.126 Sum_probs=117.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHH
Q 007604 29 RGGWRACSFVVVYEVFERMAYHG-ISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAF 107 (596)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~ 107 (596)
.++.|..+.+++..++....-.+ -...+..|+...++++..+.+...+..+....++.++...+--+.+|-|+++..|+
T Consensus 236 ~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl 315 (463)
T KOG2816|consen 236 VGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGL 315 (463)
T ss_pred cCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHH
Confidence 34445556555555544333332 22244678888999999999999999999999999999844444459999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhh
Q 007604 108 FFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHK 187 (596)
Q Consensus 108 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 187 (596)
....++....++++ +.++++....+.++. +...|+..++.+.+.++++ +
T Consensus 316 ~~~~~~~~~~af~~------------------------~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e------~ 364 (463)
T KOG2816|consen 316 LSEFLQLLLFAFAT------------------------ETWMMFAAGVVVALA-GIVFPAIRAFASILVSPEE------Q 364 (463)
T ss_pred HHHHHHHHHHHHhc------------------------cchhhhHHHHHHHhh-cchhHHHHhHHHhhccccc------c
Confidence 99999999999885 666777766665544 5667999999999999997 9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhc
Q 007604 188 LSFFNWWMFSIFFGTLLGNTVLVYI 212 (596)
Q Consensus 188 ~~~~~~~~~~~~ig~~l~~~~~~~l 212 (596)
|+.+++....-.+.+.++|.+-+.+
T Consensus 365 g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 365 GKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred cchhhHHHHHHHHhhhhhHHHHHHH
Confidence 9999999999999999888877655
No 259
>PRK03612 spermidine synthase; Provisional
Probab=96.91 E-value=0.048 Score=59.96 Aligned_cols=159 Identities=12% Similarity=0.088 Sum_probs=90.4
Q ss_pred HHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH---HHHHHHHhhccCCCCC
Q 007604 53 SSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG---MIVLALSVSLSGLKPP 129 (596)
Q Consensus 53 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~ 129 (596)
-....-.+.-.+|-+..+.+.+++++.++..+|..++|+++++. -|+...+ -+.+..++ ..++.......
T Consensus 34 Ev~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~-e~~i~l~~~~~~~ll~~~~~~~----- 106 (521)
T PRK03612 34 ELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAV-ELLLALLGGLSALILYAAFAFQ----- 106 (521)
T ss_pred HHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-----
Confidence 34444555667898999999999999999999999999887543 3332221 11111111 11111111000
Q ss_pred CCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhh
Q 007604 130 PCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVL 209 (596)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~ 209 (596)
......++...++.++..|+..|....+..+...++ -++..+..|....+|+++|.++.
T Consensus 107 --------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~-------~g~~~g~ly~~ntlGa~~G~l~~ 165 (521)
T PRK03612 107 --------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQH-------LGHNVATVLAADYLGALVGGLAF 165 (521)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------hhhhhhhhHhHHhHHHHHHHHHH
Confidence 001112233344566777777776666555432211 45667778888899999999888
Q ss_pred hhccc-cccc-hhhhHHHHHHHHHHHHHHHhc
Q 007604 210 VYIQD-DVGW-ALGYGLPALGLAIAIAIFLAG 239 (596)
Q Consensus 210 ~~l~~-~~g~-~~~f~~~~~~~~~~~~~~~~~ 239 (596)
+++.- ..|- +..+.++++..+++++.++..
T Consensus 166 ~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~~ 197 (521)
T PRK03612 166 PFLLLPRLGLIRTAALTGSLNLLAALVFLWLF 197 (521)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 87643 4664 444444444445554444433
No 260
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.77 E-value=0.013 Score=46.98 Aligned_cols=73 Identities=5% Similarity=-0.015 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHh
Q 007604 47 MAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSV 121 (596)
Q Consensus 47 ~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~ 121 (596)
++.|..+..+| .+.++.++|.++.+++.+.-++++.+|.+...++.++. .+++.+..++++..+.++.+++..
T Consensus 6 igRFayTplLP-~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 6 IGRFAYTPLLP-LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hHHHHHHhHhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444555555 56779999999999999999999999999999999987 889999999999999998888764
No 261
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.75 E-value=0.0024 Score=67.77 Aligned_cols=121 Identities=9% Similarity=0.120 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchh--H
Q 007604 413 QRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESM--K 490 (596)
Q Consensus 413 ~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~--r 490 (596)
+.+.+|.++++++.++++..+. .....+.+.+.++++|.++.=+...++..|+.|++. |
T Consensus 93 ~tI~lGail~~iGh~~L~~~~~-------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dprr 153 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISSV-------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRR 153 (498)
T ss_pred HHHHHHHHHHHHHHHHHhcccc-------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCccc
Confidence 6689999999999988876420 234567778888899999999999999999997543 5
Q ss_pred HHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccccccCC
Q 007604 491 SLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKAEV 568 (596)
Q Consensus 491 g~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~ 568 (596)
-.+.+++.+...+|+.+++.+.+++... .+++..|.+.++-+.++++.++++.++.+.....
T Consensus 154 D~gFt~fY~~iNiGsl~~p~i~~~~~~~----------------~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~ 215 (498)
T COG3104 154 DGGFTLFYMGINIGSLIAPIITGLLAIN----------------YGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGV 215 (498)
T ss_pred CCCccEEEEEeehHHHHHHHHHHHHHHh----------------hCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCC
Confidence 5566777777889999999999988642 2356778887888888888888877666554443
No 262
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.68 E-value=0.029 Score=55.29 Aligned_cols=92 Identities=13% Similarity=0.137 Sum_probs=68.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchh
Q 007604 410 TLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESM 489 (596)
Q Consensus 410 ~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~ 489 (596)
+++..+.+|.+...+++........++. .+.+.|.+....++.+.+....+.+...-..+.+|. .
T Consensus 64 gp~~~l~iG~~~~~~GY~~~~l~~~~~i--------------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~ 128 (250)
T PF06813_consen 64 GPWVVLLIGAVLGFVGYGLLWLAVSGRI--------------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S 128 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCcc--------------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c
Confidence 3445678888888888876655432211 124666676667777788888888888888899984 7
Q ss_pred HHHHHHHHHHHHhHHHHHHhHHHhhhh
Q 007604 490 KSLGTSYSMTTLGVGNFLSSFLLSTVS 516 (596)
Q Consensus 490 rg~~~g~~~~~~~ig~~lg~~~~~~i~ 516 (596)
||++.|+.....++++.+-+.+...+.
T Consensus 129 RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 129 RGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred cCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 999999999999999988777766654
No 263
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.63 E-value=0.00032 Score=77.22 Aligned_cols=135 Identities=15% Similarity=0.156 Sum_probs=3.0
Q ss_pred ccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhh----hhhhhh-----h--
Q 007604 373 PASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTER----YRLSVA-----K-- 441 (596)
Q Consensus 373 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~----~~~~~~-----~-- 441 (596)
.+.+.+.+-++.++...++.+ +++|. ++.+.+++|.++++++.++.++.+- +..... .
T Consensus 40 ~G~i~s~~di~~~~~~~~vsy----~g~~~-------hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~ 108 (539)
T PF03137_consen 40 SGLISSSYDIGSLVVVLFVSY----FGGRG-------HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSS 108 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHH----Hhhhc-------CCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccc
Confidence 455566667777777777666 45552 3446799999999999888775442 111100 0
Q ss_pred -ccCcc---------------cc--CCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhH
Q 007604 442 -DHGIV---------------EK--GQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGV 503 (596)
Q Consensus 442 -~~~~~---------------~~--~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~i 503 (596)
+..+. +. .......++.+++..++.|+|..-.++...+|+-|.++++..+.+.|+......+
T Consensus 109 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~l 188 (539)
T PF03137_consen 109 ISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSIL 188 (539)
T ss_dssp -------------------------------------------SSS----------------------------------
T ss_pred cccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhc
Confidence 00111 00 1122334556777889999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHhhhhcc
Q 007604 504 GNFLSSFLLSTVSDI 518 (596)
Q Consensus 504 g~~lg~~~~~~i~~~ 518 (596)
|..+|-.+.+.....
T Consensus 189 GPa~Gf~lg~~~L~~ 203 (539)
T PF03137_consen 189 GPALGFLLGSFCLRI 203 (539)
T ss_dssp ---------------
T ss_pred cHHHHHHHHHHHHhc
Confidence 999998888777643
No 264
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.86 E-value=0.063 Score=56.52 Aligned_cols=125 Identities=14% Similarity=0.117 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccch---h
Q 007604 413 QRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPES---M 489 (596)
Q Consensus 413 ~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~---~ 489 (596)
+.+.+|.++..+|.+++.+....... ....+...+.+.+.++++|.++.=|...++..++++++ .
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~ 69 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSL------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSR 69 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchh------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhh
Confidence 45777888888888775544321000 01234456777888999999999999999999999866 4
Q ss_pred HHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCCcccchhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 007604 490 KSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYK 565 (596)
Q Consensus 490 rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 565 (596)
|..+...+.....+|..++..+.+++.+ ..++...|++.++..+++.+.++...++++.+
T Consensus 70 ~~~~F~~fY~~in~G~~~~~~~~~~i~~----------------~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 70 RDSFFNWFYWGINIGSLFSPTLVPYIQQ----------------NYGWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHH----------------CS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhhHHHHHHHHhhhhHhhcccchhhcc----------------ccchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 6667777778888999999888887753 12446678877777787877777776666655
No 265
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.78 E-value=0.15 Score=46.35 Aligned_cols=62 Identities=15% Similarity=0.186 Sum_probs=54.3
Q ss_pred ehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhh
Q 007604 454 LTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTV 515 (596)
Q Consensus 454 ~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i 515 (596)
.+.+.+++.-++.|++.++.+++.-.++.+...++.+++..|+++.....+..+|..+.-.+
T Consensus 87 ~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 87 PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667788889999999999999999999999999999999999999888888888776554
No 266
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.70 E-value=0.3 Score=52.19 Aligned_cols=146 Identities=8% Similarity=-0.049 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhh
Q 007604 43 VFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVS 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~ 122 (596)
.+.+++.-+.-+.+..|+..+ |+++...|..=+...+....++....++.+|+ |..|+=++++.....+..++..+-.
T Consensus 268 alLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~ 345 (432)
T PF06963_consen 268 ALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFW 345 (432)
T ss_pred HHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHh
Confidence 334444444456677888866 99999999999999999999999999999998 9999999999888777766665532
Q ss_pred ccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHH
Q 007604 123 LSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGT 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 202 (596)
.+... . ...+...++.+..+-=+|.=++--+..-++-|..|+++ |+...+..+...++.-
T Consensus 346 ~~~~~----------~----~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ 405 (432)
T PF06963_consen 346 APGSP----------F----SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFE 405 (432)
T ss_pred cCCCC----------c----hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHH
Confidence 22100 0 12355666667777777777888888999999999886 9999999888888888
Q ss_pred HHhhhhhh
Q 007604 203 LLGNTVLV 210 (596)
Q Consensus 203 ~l~~~~~~ 210 (596)
++-..+.-
T Consensus 406 ll~~~~~i 413 (432)
T PF06963_consen 406 LLSFVLTI 413 (432)
T ss_pred HHHHHHHh
Confidence 77765543
No 267
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.63 E-value=0.087 Score=59.12 Aligned_cols=136 Identities=12% Similarity=0.145 Sum_probs=94.7
Q ss_pred ccccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhh----hhhhhh-------h
Q 007604 373 PASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTER----YRLSVA-------K 441 (596)
Q Consensus 373 ~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~----~~~~~~-------~ 441 (596)
.+.+...+-++..+....+.+ ++.|. .+.+.+++|.++++++.++.++.+. +.++.. .
T Consensus 134 sG~I~s~~dig~~l~i~fVsY----fG~r~-------HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~ 202 (735)
T KOG3626|consen 134 SGLIASSYDIGNLLLIIFVSY----FGSRG-------HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVEN 202 (735)
T ss_pred ceeEeeecccchhhhhHhHHH----hcccc-------CccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccC
Confidence 455556666666666666666 45552 3336689999999999888876542 111110 0
Q ss_pred c-c-----------C-ccccC-------CcceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHH
Q 007604 442 D-H-----------G-IVEKG-------QQVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTL 501 (596)
Q Consensus 442 ~-~-----------~-~~~~~-------~~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 501 (596)
+ . . +.++. ..+...+..++...++.|+|....++.+.+|+-|.+.++....+.|+.....
T Consensus 203 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~ 282 (735)
T KOG3626|consen 203 PSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMA 282 (735)
T ss_pred CccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHH
Confidence 1 0 0 11110 1122234456677899999999999999999999999999999999999999
Q ss_pred hHHHHHHhHHHhhhhccc
Q 007604 502 GVGNFLSSFLLSTVSDIT 519 (596)
Q Consensus 502 ~ig~~lg~~~~~~i~~~~ 519 (596)
.+|-++|-.+.+......
T Consensus 283 ~lGPaiGfllgS~~l~lY 300 (735)
T KOG3626|consen 283 ILGPAIGFLLGSFCLKLY 300 (735)
T ss_pred HhhhHHHHHHHHHHHHee
Confidence 999999999988887654
No 268
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.97 E-value=1.6 Score=49.48 Aligned_cols=317 Identities=12% Similarity=-0.002 Sum_probs=178.6
Q ss_pred cCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccc
Q 007604 64 LHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKAS 143 (596)
Q Consensus 64 lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (596)
.+...........++.....+..+.....+|..-|+-..+..-++..+++.+...+.. ++ ..+.
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~lla-i~---------------a~~~ 78 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLS-FG---------------AIPS 78 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hc---------------cCcc
Confidence 3333445556777888888888999999999886677777777777777777776553 11 0011
Q ss_pred cchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccccc-chh--
Q 007604 144 TLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVG-WAL-- 220 (596)
Q Consensus 144 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g-~~~-- 220 (596)
........++.+.+.++.++..+.-+.+.+++.+..++ ..+.+..+++++..+.+.+ |.+++..+..... +..
T Consensus 79 ~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~---~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~f 154 (654)
T TIGR00926 79 SGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE---RQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCF 154 (654)
T ss_pred cccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc---cchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhccc
Confidence 11123345667778889999999999999999987651 3345688888888777665 4545555544332 211
Q ss_pred ----hhHH-HHHHHHHHHHHHHhcCCceeccCCCCChhHHHHHHHHHHHHhcCCCCCCCchhhhhhhhHHhhhcCccccc
Q 007604 221 ----GYGL-PALGLAIAIAIFLAGTPFYRHKKPAGSPFTRMAKVIVAAIRKRNVPLPIDPQELYELDLEYYAQRGKYRIG 295 (596)
Q Consensus 221 ----~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (596)
.+.. .++..++.++.++......+..++++.......++.+......+. +..
T Consensus 155 g~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~-----------------------~~~ 211 (654)
T TIGR00926 155 GCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRK-----------------------RFS 211 (654)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHH-----------------------hhc
Confidence 1332 333344444454555444444444332222222222211111000 000
Q ss_pred CCcchhhhhhhhhhcCCCCCccccc--chhhhhhhhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCCCcccccc
Q 007604 296 STQNLRFFNKAAVKTGATNPWILCS--VSQVEETTQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPP 373 (596)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 373 (596)
..+ .. ....|.... +...++.+...+++.++...+.+++.+.+.......+..++++..+ .+...+
T Consensus 212 ~~~------~~-----~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~-~l~g~~ 279 (654)
T TIGR00926 212 TRS------EH-----WPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDG-DVGGFE 279 (654)
T ss_pred cCC------cc-----cchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcC-ccCCEe
Confidence 000 00 001111111 1223345667777777777777777766655555555444444322 111112
Q ss_pred cccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 007604 374 ASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLS 438 (596)
Q Consensus 374 ~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~ 438 (596)
.....+..+-.++..++...+..++-+++.++ ..+.+.+.-+.+.+.++.+.+.+.......
T Consensus 280 ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~---~~~ls~l~k~~iG~~la~la~~va~~ve~~ 341 (654)
T TIGR00926 280 IQPDQMQVVNPLLILIFVPIFDYIVYPAIAKC---GTRFTSLRKMAVGGLLAALSFFVAALVQLK 341 (654)
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhc---CCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23345567777777777777777888886432 345667888888888888888887766555
No 269
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=94.74 E-value=4.6 Score=41.72 Aligned_cols=110 Identities=16% Similarity=0.031 Sum_probs=62.0
Q ss_pred cccccchhHHHHHHHHHHhHHHHHhhhcccCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcce
Q 007604 374 ASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPRGITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVP 453 (596)
Q Consensus 374 ~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (596)
+..........++.+++.+.+.|+++||+. -.+-.++.+++ ++... .
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~-----------cl~~cily~~s----cl~k~------------------~ 118 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKKA-----------CLLFCILYSLS----CLTKH------------------S 118 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHH-----------HHHHHHHHHHH----HHHHh------------------c
Confidence 344555677788899999999999998831 11222222222 22110 2
Q ss_pred ehhHHHHHHHHHHHHHHHHHhhhhHHHHH-h----hccchhHHHHHHHHH-HHHhHHHHHHhHHHhhhh
Q 007604 454 LTIFIMLPQFVLMGTADAFLEVAKIEFFY-D----QAPESMKSLGTSYSM-TTLGVGNFLSSFLLSTVS 516 (596)
Q Consensus 454 ~~~~~li~~~~l~g~~~~~~~~~~~~~~~-~----~~P~~~rg~~~g~~~-~~~~ig~~lg~~~~~~i~ 516 (596)
.+...+++.=++.|++..+.....=++.. | -.|++..+...+... +.+.+-.+++..+...+.
T Consensus 119 ~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~ 187 (354)
T PF05631_consen 119 SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLA 187 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHH
Confidence 35566777778888888777766555443 2 245554444444433 334444555555554444
No 270
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.60 E-value=0.48 Score=51.02 Aligned_cols=90 Identities=22% Similarity=0.218 Sum_probs=64.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhc---cchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccC
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQA---PESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNN 531 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~---P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~ 531 (596)
+.......+++..+|..+.....-+...|.. |.+ +|..++....+..+|+.++..+.+...+..
T Consensus 85 s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~------------ 151 (433)
T PF03092_consen 85 SAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSF------------ 151 (433)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcC------------
Confidence 3344555667888899999999988888887 444 899999999999999999999988775422
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 007604 532 LNVCHLDYYYAFFAILNVLNFVFFLVVAKF 561 (596)
Q Consensus 532 ~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~ 561 (596)
+.+..|.+.+++..+..+..+++..+
T Consensus 152 ----~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 152 ----GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred ----CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 22344666666656555555555443
No 271
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.41 E-value=4.5 Score=43.90 Aligned_cols=59 Identities=8% Similarity=-0.115 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHhh-hhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhc
Q 007604 459 MLPQFVLMGTADAFLEV-AKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSD 517 (596)
Q Consensus 459 li~~~~l~g~~~~~~~~-~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~ 517 (596)
....++...+-...+.. ..|.++.|....+...+..++......+|..+|+.+...+..
T Consensus 131 ~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 131 FALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444 789999999999999999999999999999999999888764
No 272
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.03 E-value=0.31 Score=51.34 Aligned_cols=140 Identities=8% Similarity=0.053 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHH--HHHHHHH
Q 007604 38 VVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFF--FYLMGMI 115 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~--~~~i~~~ 115 (596)
+.++.++|++..-|+..-+.. .....--..+.-+....|++|-+++.--.-++ |+ |++.+.+.+ +..+..+
T Consensus 252 L~lVY~aEY~InqGv~~tl~f--p~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri---r~lwils~LQ~~nl~~~~ 324 (402)
T PF02487_consen 252 LFLVYFAEYFINQGVAPTLLF--PNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI---RRLWILSLLQVINLVFLL 324 (402)
T ss_pred HHHHHHHHHHHHhchHHHhcC--CccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh---hhHHHHHHHHHHHHHHHH
Confidence 444555555544444333221 12222233455566677777766665443322 33 444443332 3333333
Q ss_pred HHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHH
Q 007604 116 VLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWM 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (596)
+.+.-..+| +.+..++..+..|+..|....+....+.|..|+++ |....+...
T Consensus 325 l~s~~~fip---------------------si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vs 377 (402)
T PF02487_consen 325 LQSWYRFIP---------------------SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVS 377 (402)
T ss_pred HHHHHHHhh---------------------HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHH
Confidence 333322222 67777777788899999999999999999888775 999999888
Q ss_pred HHHHHHHHHhhhhhhh
Q 007604 196 FSIFFGTLLGNTVLVY 211 (596)
Q Consensus 196 ~~~~ig~~l~~~~~~~ 211 (596)
++-++|..++..++-+
T Consensus 378 vsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 378 VSDSLGILLAGLLGLP 393 (402)
T ss_pred HHhhHHHHHHHHHHHH
Confidence 8888888877755443
No 273
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.98 E-value=2.1 Score=46.02 Aligned_cols=115 Identities=15% Similarity=0.106 Sum_probs=74.4
Q ss_pred HHHHHHhhhhhHHHhhhh--cchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHH
Q 007604 79 GGTIWVTPIFGAGVAEAY--LGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYT 156 (596)
Q Consensus 79 ~~~~~~~~~~~G~laD~~--~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 156 (596)
..+..++.++.+.+.+|. +||++++.++.++..++.++.-++. |.-.+.+ .+.+....-+.+.....+.-++
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~dap~~----~t~~~~~~~~~~~~~~~ii~~l 362 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PNDAPLR----PTDSPPLLFTPSYYLALIIGFL 362 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--cccCCCC----CCcccccccccchhHHHHHHHH
Confidence 344445555555565433 3899999999999888887776653 2111100 0111222222345455666678
Q ss_pred HHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhh
Q 007604 157 LAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGN 206 (596)
Q Consensus 157 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~ 206 (596)
.|++-+......+.++++..|++ |..+++++-+--.++..++-
T Consensus 363 ~G~~D~~~~t~~~~ii~~~~~~~-------~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 363 LGFGDACFNTQRYVIIALLYPDD-------RAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred HhhHHHHHHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999765 88888887666666665443
No 274
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.82 E-value=1.1 Score=44.14 Aligned_cols=141 Identities=11% Similarity=0.032 Sum_probs=90.4
Q ss_pred hhhHHHHHHHHHHHhhhhhHHHhhhhcchh--HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhH
Q 007604 71 SANNVTNWGGTIWVTPIFGAGVAEAYLGRY--WTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLG 148 (596)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~G~laD~~~Grk--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (596)
-|.+.+.+.++.++|.-+...+..|- ..| ..+.+...+..+...+..+..+ . .|+..++.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~~-v----------------sP~kes~~ 345 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTSS-V----------------SPSKESPS 345 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHhc-c----------------CCCcCCch
Confidence 46777777777777777666665553 322 3445555544444443333321 1 11223455
Q ss_pred HHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHH
Q 007604 149 TFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALG 228 (596)
Q Consensus 149 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~ 228 (596)
.-+++..++-.+.|.++|...-+=.+..|+++ |.+.++++..-.|+-..++-...-.-....+-|..|.++.+.
T Consensus 346 ~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~ 419 (454)
T KOG4332|consen 346 ESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAF 419 (454)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHH
Confidence 55777888888999999999999999999987 999999998888876654432211112234567889888877
Q ss_pred HHHHHHH
Q 007604 229 LAIAIAI 235 (596)
Q Consensus 229 ~~~~~~~ 235 (596)
..++.+.
T Consensus 420 ~~~a~i~ 426 (454)
T KOG4332|consen 420 LFVASIL 426 (454)
T ss_pred HHHHHHH
Confidence 6666544
No 275
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=92.35 E-value=1.8 Score=43.43 Aligned_cols=59 Identities=15% Similarity=0.238 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHh
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLS 513 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~ 513 (596)
+++......++=|+-.+...+..+--+.+..+++.|-.+|+.......+|..++..+.-
T Consensus 341 si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 341 SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 33333333333355445555555556677788999999999999888888888777653
No 276
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.84 E-value=23 Score=38.76 Aligned_cols=170 Identities=14% Similarity=0.093 Sum_probs=92.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---CChhhhhhHHHHHHH-HHHHhhhhhHHHhhhhcchhHHHH
Q 007604 29 RGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLH---HGTVKSANNVTNWGG-TIWVTPIFGAGVAEAYLGRYWTFV 104 (596)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~~~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Grk~~~~ 104 (596)
+..+++++.+.+..++..+.+- +.--++|.+= .++.....+=....+ +..+...+-.++++++ +|.+++.
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~-----~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy 93 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYT-----ILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFY 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHH
Confidence 4455677777777776655432 2223333331 234444444332222 5566677789999998 9999998
Q ss_pred HHHHHHHHHHHHHHHHhhcc---CCCCCCCCCCCCcc---------ccccccchhHHHHHHHHHHHHhccCcccchhhhh
Q 007604 105 IAFFFYLMGMIVLALSVSLS---GLKPPPCNDINSQD---------CRKASTLQLGTFFAALYTLAVGTGGTKPNILTIA 172 (596)
Q Consensus 105 ~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 172 (596)
+....+.....+.++.- .| .++++.--+ +.+. -..-.++....+++.- --.|.-...-..+.+.
T Consensus 94 ~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~-~~~~~~~~~~~~~i~~~~~Wt~slfYv~a--ElwgsvvlSlLFW~fA 169 (491)
T PF03219_consen 94 IIIIPFLGFFALFAFVL-YPNRDILHPDAFAD-KLLAILPPGFKGFIAMFRNWTFSLFYVMA--ELWGSVVLSLLFWGFA 169 (491)
T ss_pred HHHHHHHHHHHHHHHHH-hhchhhcCCCHHHH-HhhhhccchHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 77776665555554431 11 111100000 0000 0000001111111111 1122222223468889
Q ss_pred hccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccc
Q 007604 173 ADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQD 214 (596)
Q Consensus 173 ~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~ 214 (596)
.|.++.++ -.+.++++..+.|+|.+++..+..++.+
T Consensus 170 N~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 170 NEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999886 8899999999999999999888777766
No 277
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=91.51 E-value=2.4 Score=41.72 Aligned_cols=59 Identities=12% Similarity=0.138 Sum_probs=36.6
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhhhc-----cccccchhhhHHHHHHHHHHHHHHHhcCCceec
Q 007604 187 KLSFFNWWMFSIFFGTLLGNTVLVYI-----QDDVGWALGYGLPALGLAIAIAIFLAGTPFYRH 245 (596)
Q Consensus 187 r~~~~~~~~~~~~ig~~l~~~~~~~l-----~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 245 (596)
|+.......++.++|+++..+..-.- .....|++.+.+.+++.++-++++.+..+++..
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~ 67 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDI 67 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 66666667778888888774332111 111349988888777766666666666555443
No 278
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.92 E-value=2.2 Score=45.89 Aligned_cols=57 Identities=16% Similarity=0.170 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhh
Q 007604 146 QLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTV 208 (596)
Q Consensus 146 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~ 208 (596)
+-+..++..++.|+..|-....+..+..+..++++ |..+..+..++.++|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666888999999999999999999988765 7777777777777877766643
No 279
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.92 E-value=26 Score=37.73 Aligned_cols=59 Identities=15% Similarity=0.129 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHh
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLS 513 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~ 513 (596)
+-++.++..+++|+..|........+..+.++++.|..+..+..++-.+|-.+|..+.-
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666899999999999999999999999999999999999888888888887643
No 280
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=88.81 E-value=0.97 Score=47.89 Aligned_cols=167 Identities=16% Similarity=0.139 Sum_probs=102.9
Q ss_pred hhHHhHHHHHHHhhhhhhhhhcccceeeeeeccccccCCCcccccccccccchhHHHHHHHHHHhHHHHHhhhcccCCCC
Q 007604 328 TQMLAMIPILVATFVPSTMLAQINTLFVKQGTTLDRAIGSSFKIPPASLTGFVTLSMLVCVVLYDRCFVRITRRWTKNPR 407 (596)
Q Consensus 328 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r~~~~~~ 407 (596)
++++++..+.+..-..|..-.++.+-+..+ ...... -...++...++..++.+|+.+...|+-..|+.+|+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk-------~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR- 102 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHK-------WSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR- 102 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcc-------cccccccccccccceeccccccccccccccccccc-
Confidence 445555555555555555443333322111 112222 23556777888889999999998888777765432
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCC--cceehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhc
Q 007604 408 GITLLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQ--QVPLTIFIMLPQFVLMGTADAFLEVAKIEFFYDQA 485 (596)
Q Consensus 408 ~~~~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~ 485 (596)
.-+.++....++++...++..+.... ++|+.. .....+...++.+.+.-++......+.-++..+..
T Consensus 103 -----PfI~~~s~~i~~~l~Lig~aaDig~~------lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~ 171 (498)
T KOG0637|consen 103 -----PFILAGSLLIAVSLFLIGYAADIGLL------LGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLA 171 (498)
T ss_pred -----chHHHhhHHHHHHHhhhhhHhhhhHH------hcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhc
Confidence 22555666677777666654321111 122211 11234445556667777777777777889999998
Q ss_pred cchhHHH-HHHHHHHHHhHHHHHHhHHHhh
Q 007604 486 PESMKSL-GTSYSMTTLGVGNFLSSFLLST 514 (596)
Q Consensus 486 P~~~rg~-~~g~~~~~~~ig~~lg~~~~~~ 514 (596)
-++.+-+ +++++.+..++|+.+|-.+.++
T Consensus 172 ~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 172 RGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred cChhhhhccchhHHHHHHhcceeeeecccc
Confidence 7777777 9999999999999999887663
No 281
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=87.24 E-value=8 Score=39.80 Aligned_cols=95 Identities=12% Similarity=0.104 Sum_probs=60.0
Q ss_pred ehhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCccccCC-
Q 007604 454 LTIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILNNL- 532 (596)
Q Consensus 454 ~~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~~~- 532 (596)
-++|+.-..++++.....+..+.+..-+++.-..+.-|...|++.+.. -.+-+.+.-.+.+.. ++.=+.
T Consensus 324 ~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvA---l~lQsilT~iVvd~~-------g~~L~ir 393 (433)
T KOG3810|consen 324 QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVA---LILQSILTLIVVDDR-------GLGLDIR 393 (433)
T ss_pred cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHH---HHHHHhheEEEEccc-------ccCCCcc
Confidence 367888888999988888888888888887777888888888877643 333333333333211 110011
Q ss_pred -cccchhHHHHHHHHHHHHHHHHHHHH
Q 007604 533 -NVCHLDYYYAFFAILNVLNFVFFLVV 558 (596)
Q Consensus 533 -~~~~~~~~f~~~~~~~~v~~~~~~~~ 558 (596)
.-.-+..+|.+++++.+++....+..
T Consensus 394 ~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 394 TQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred eeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 01123467888888888776654443
No 282
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=85.68 E-value=13 Score=37.85 Aligned_cols=117 Identities=16% Similarity=0.077 Sum_probs=66.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHH
Q 007604 29 RGGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFF 108 (596)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~ 108 (596)
+...|.++++....+ ..++.|.-..++...... ++..... +...+......++.+.+..++ |-|.++.++..
T Consensus 25 ~~~~knv~i~s~~fl-~~f~a~~gl~nlq~~vn~--~lg~~sl----~~~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~ 96 (390)
T KOG3097|consen 25 LGILKNVLILSIAFL-LTFTAYLGLQNLQTSVNY--DLGTVSL----GALYLSLIDSSMFMPLLIRFL-GTKWTMVLAVF 96 (390)
T ss_pred cchhhhhhHHHHHHH-HHHHHHHHHHHHHHHHhc--Ccccchh----hhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHH
Confidence 344456665544333 333434334444444433 2222222 233444455555666667665 99999988876
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCC
Q 007604 109 FYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDE 178 (596)
Q Consensus 109 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 178 (596)
.+..-....- . +.+..++.+-...|+|.+..+..--+|+++.-..
T Consensus 97 ~Y~lyiA~Nl-----~--------------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097|consen 97 PYALYIAANL-----E--------------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred HHHHHHHhhc-----c--------------------hhHHhhccHHHhhccccccccccCcceecHHHHH
Confidence 6654322211 1 1555667777788999998888777777766544
No 283
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=85.66 E-value=59 Score=35.40 Aligned_cols=62 Identities=15% Similarity=0.105 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccc
Q 007604 458 IMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDIT 519 (596)
Q Consensus 458 ~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~ 519 (596)
.++..+++..+.....+++..++-+.++.|.+-|++|.+.|+...+|+---..++-.+.+..
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 34556788888888889999999999999999999999999988888776666655555443
No 284
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=84.98 E-value=9 Score=37.35 Aligned_cols=62 Identities=16% Similarity=0.163 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHHHhhccc-hhHHHHHHHHHH-HHhHHHHHHhHHHhhhhc
Q 007604 456 IFIMLPQFVLMGTADAFLEVAKIEFFYDQAPE-SMKSLGTSYSMT-TLGVGNFLSSFLLSTVSD 517 (596)
Q Consensus 456 ~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~-~~~ig~~lg~~~~~~i~~ 517 (596)
.+.++....+.|++.+...+...+++.+..|+ +.|+...+.... ...+|..+++.+.+.+..
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555668888888999999999999998 778888888888 577788888866666543
No 285
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=84.61 E-value=34 Score=36.36 Aligned_cols=61 Identities=28% Similarity=0.317 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhh
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVS 516 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~ 516 (596)
+.+++-+.-++.|++... ..+.++|+...+|++.--++++......-+|..+|..++-.+.
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllv 153 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLV 153 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777777888877654 6778899999999999999998888887788777777776654
No 286
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=84.35 E-value=68 Score=35.06 Aligned_cols=43 Identities=14% Similarity=-0.055 Sum_probs=38.8
Q ss_pred hhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhc
Q 007604 475 VAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSD 517 (596)
Q Consensus 475 ~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~ 517 (596)
...|.++.|..+.+...+..++......+|..+++.+...+..
T Consensus 163 lLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 163 LLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999888865
No 287
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=83.06 E-value=67 Score=33.98 Aligned_cols=57 Identities=19% Similarity=0.137 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHH
Q 007604 455 TIFIMLPQFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFL 511 (596)
Q Consensus 455 ~~~~li~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~ 511 (596)
+-+|.+....++|+..+-.......+..+.+|++.+-.+..+....-..|-..|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 456777888999999998888888899999998888888888887777777777665
No 288
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=82.85 E-value=3.6 Score=40.51 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=18.5
Q ss_pred cchhHHHHHHHHHHHHhHHHHHHhHHHhhh
Q 007604 486 PESMKSLGTSYSMTTLGVGNFLSSFLLSTV 515 (596)
Q Consensus 486 P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i 515 (596)
.+-+|..+.|+-.+..+..+.+.....+.+
T Consensus 73 vpii~~iGLglg~liW~s~n~l~Gw~~grf 102 (254)
T PF07857_consen 73 VPIIKTIGLGLGMLIWGSVNCLTGWASGRF 102 (254)
T ss_pred hhHhhhhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 355666666666666666666666665544
No 289
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=80.68 E-value=0.51 Score=48.29 Aligned_cols=116 Identities=11% Similarity=0.052 Sum_probs=3.8
Q ss_pred hHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccc-cchhHHHH
Q 007604 73 NNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKAS-TLQLGTFF 151 (596)
Q Consensus 73 ~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 151 (596)
.....|.++..+|..+.++.-=+...+|++. +..+.-.+...+..+ ||.... +...+. -.+-+..+
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~-----------cn~~p~-~~~~~~~~~~d~~~~ 252 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLL-----------CNVQPR-PRYLPVLFNSDAWFI 252 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHH-----------HHhhcc-cccCCCcccchHHHH
Confidence 3466789999999998887531110234333 333332222222222 111100 000000 01344556
Q ss_pred HHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhh
Q 007604 152 AALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNT 207 (596)
Q Consensus 152 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~ 207 (596)
+..++.|+..|-....+..+.++..++++ |..+-.+..++.++|-.+|..
T Consensus 253 i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 253 ILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp --------------HHHH--------------------------------------
T ss_pred HHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 66778999999999999999999999776 777766666777777766653
No 290
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=80.40 E-value=92 Score=33.79 Aligned_cols=170 Identities=13% Similarity=0.014 Sum_probs=102.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC---hhhhhhHHHHHHH-HHHHhhhhhHHHhhhhcchhHHHHH
Q 007604 30 GGWRACSFVVVYEVFERMAYHGISSNLVMYLTDKLHHG---TVKSANNVTNWGG-TIWVTPIFGAGVAEAYLGRYWTFVI 105 (596)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~---~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Grk~~~~~ 105 (596)
..++++..+.+..+|..+.+. +.--+++.+..+ +....++-+...+ ++.+..++-+++.++. .|.+++.+
T Consensus 24 ~E~~kflpl~Ll~f~I~~ny~-----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~ 97 (509)
T COG3202 24 YELKKFLPLALLFFCILFNYN-----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYI 97 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHH
Confidence 355667777777666655433 223455665544 4455555555555 7778888889999998 99999998
Q ss_pred HHHHHHHHHHHHHHHhhcc--CCCCCC-C--------CC-CCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhh
Q 007604 106 AFFFYLMGMIVLALSVSLS--GLKPPP-C--------ND-INSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAA 173 (596)
Q Consensus 106 ~~~~~~i~~~~~~~~~~~~--~~~~~~-~--------~~-~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 173 (596)
-...+....++.++.-. | ...++. . .+ .--..-..-+.+....+++.-=+ -|.=...-..+.+..
T Consensus 98 ~~~~F~~fF~LFa~Vi~-P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aEL--WgslV~S~lFw~faN 174 (509)
T COG3202 98 ILGFFLGFFALFAFVIY-PYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAEL--WGSLVLSLLFWQFAN 174 (509)
T ss_pred HHHHHHHHHHHHHHHHh-ccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 88888877777776631 1 011110 0 00 00001111222333333332111 111122224567788
Q ss_pred ccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccc
Q 007604 174 DQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQD 214 (596)
Q Consensus 174 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~ 214 (596)
|+...++ -.+.++.++.+.|++..++..+..++.+
T Consensus 175 eitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 175 EITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888886 8899999999999999999888888765
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=71.66 E-value=7.4 Score=40.98 Aligned_cols=129 Identities=16% Similarity=0.053 Sum_probs=71.6
Q ss_pred HHHHHHHhhhcCC---ChhhhhhHHHH-HHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 007604 54 SNLVMYLTDKLHH---GTVKSANNVTN-WGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPP 129 (596)
Q Consensus 54 ~~l~~yl~~~lg~---~~~~~~~~~~~-~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 129 (596)
+..|.++.+..+- +.--.-..... +.+...+|.+...++-++ +||+..+ ..++-.+...+..+....| .
T Consensus 264 siFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i-~v~lR~lfiPlF~~cn~~~--~-- 336 (406)
T KOG1479|consen 264 SIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTI-PVLLRLLFIPLFLLCNYPP--L-- 336 (406)
T ss_pred EecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehH-HHHHHHHHHHHHHHhccCC--C--
Confidence 4566666644322 12222333444 788888887777777664 5555443 3333333333333221100 0
Q ss_pred CCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhh
Q 007604 130 PCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGN 206 (596)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~ 206 (596)
.....+-+.++....++|+..|-.......+.++..|+++ +..+-.+.......|-..|.
T Consensus 337 -----------~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e------~e~aG~~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 337 -----------PVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE------KEAAGNLMVFFLVGGLALGS 396 (406)
T ss_pred -----------CceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH------HHHHHHHHHHHHHHHHHHhh
Confidence 0011244556667788999999999999999999988876 44444444444444444443
No 292
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.19 E-value=20 Score=29.97 Aligned_cols=39 Identities=10% Similarity=-0.105 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHH
Q 007604 76 TNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGM 114 (596)
Q Consensus 76 ~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~ 114 (596)
+.=.++..+.....||+.|++.|.++-.++.+++..++.
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~A 87 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGA 87 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 334455566666779999999998887666655544433
No 293
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=63.97 E-value=1e+02 Score=32.47 Aligned_cols=95 Identities=14% Similarity=0.194 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccccccC-CCCcc-ccCCcc--cch
Q 007604 462 QFVLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDITKRHG-HKGWI-LNNLNV--CHL 537 (596)
Q Consensus 462 ~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~-~~~w~-~~~~~~--~~~ 537 (596)
.++++-+..+....+.-.+...+-.++.-|-++......+..|.++|..+.-.+ +++. ...++ .-+.++ -..
T Consensus 139 ~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL----~s~dF~N~y~rs~P~~~g~ItL 214 (510)
T KOG3574|consen 139 LFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLAL----ESPDFCNTYLRSIPLDQGFITL 214 (510)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEe----cChhhhhHHHhcCcCccceEEh
Confidence 334445555555555555666666677777766666666666666655543332 2110 00000 001111 123
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q 007604 538 DYYYAFFAILNVLNFVFFLVVAK 560 (596)
Q Consensus 538 ~~~f~~~~~~~~v~~~~~~~~~~ 560 (596)
..++|+.+.+.++...+..++.+
T Consensus 215 ~gy~~fwg~~~~vat~Lv~~~kk 237 (510)
T KOG3574|consen 215 AGYLWFWGALFIVATTLVALLKK 237 (510)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcC
Confidence 44666667676666666555543
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=61.24 E-value=2.5e+02 Score=30.61 Aligned_cols=61 Identities=8% Similarity=-0.040 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHH-hhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhc
Q 007604 457 FIMLPQFVLMGTADAFL-EVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSD 517 (596)
Q Consensus 457 ~~li~~~~l~g~~~~~~-~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~ 517 (596)
|.....++..-+-..++ .-..|.+..|+...+...+..+++++...++..+++.+...+..
T Consensus 148 Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 148 WSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444444433322233 33567888899999999999999999999999999998887764
No 295
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=59.92 E-value=92 Score=34.82 Aligned_cols=94 Identities=21% Similarity=0.321 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHhhcc---c-hhHH--HHHHHHHHHHhHHHHHHhHHHhhhhccccccCCCCcccc
Q 007604 457 FIMLPQFVLMGTADAFLEVAKIEFFYDQAP---E-SMKS--LGTSYSMTTLGVGNFLSSFLLSTVSDITKRHGHKGWILN 530 (596)
Q Consensus 457 ~~li~~~~l~g~~~~~~~~~~~~~~~~~~P---~-~~rg--~~~g~~~~~~~ig~~lg~~~~~~i~~~~~~~~~~~w~~~ 530 (596)
..+...+-+.++|.+..-|...++-.++++ + +.+. ..+..+.+...+|..++..+..++.+ +.+|
T Consensus 153 ~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~------~~~w--- 223 (571)
T KOG1237|consen 153 AVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD------NVGW--- 223 (571)
T ss_pred HHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh------cccc---
Confidence 344556677778899999999999999998 2 2233 56677778888999888888766642 1233
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 007604 531 NLNVCHLDYYYAFFAILNVLNFVFFLVVAKFYVYKA 566 (596)
Q Consensus 531 ~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~ 566 (596)
..-|.+.++.+.+..++|+...+.|+.+.
T Consensus 224 -------~lgf~i~~~~~~lai~iF~~g~~~y~~~~ 252 (571)
T KOG1237|consen 224 -------KLGFGIPTVLNALAILIFLPGFPFYRYKK 252 (571)
T ss_pred -------eeeccHHHHHHHHHHHHHHcCceeEEeeC
Confidence 44577777777878777777776665444
No 296
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=58.54 E-value=1.8e+02 Score=30.40 Aligned_cols=99 Identities=9% Similarity=-0.081 Sum_probs=67.2
Q ss_pred hhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCccccccccchhHH
Q 007604 70 KSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMGMIVLALSVSLSGLKPPPCNDINSQDCRKASTLQLGT 149 (596)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (596)
-.|.+=.+..+.++++.+..|++--.| .|..-++++..-...+..+..++. +.+.+.
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~----------------------t~~Iw~ 328 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQ----------------------TQHIWV 328 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhc----------------------ccceeh
Confidence 445555667788889999999998776 666554444433223333332322 126778
Q ss_pred HHHHHHHHHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHH
Q 007604 150 FFAALYTLAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFS 197 (596)
Q Consensus 150 ~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (596)
.+++.++...-.....+.+..-+++...++. .|..||+..+.
T Consensus 329 ~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~------~gLvFGiNTFv 370 (433)
T KOG3810|consen 329 CYAGYVLFRVIYQLTITIATFQIARNLSSEL------FGLVFGINTFV 370 (433)
T ss_pred hhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh------heeeeehHHHH
Confidence 8888888888888888888888888888775 88888875543
No 297
>PRK03612 spermidine synthase; Provisional
Probab=58.47 E-value=2.1e+02 Score=31.54 Aligned_cols=53 Identities=6% Similarity=0.024 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhhhhHHHHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhc
Q 007604 464 VLMGTADAFLEVAKIEFFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTVSD 517 (596)
Q Consensus 464 ~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~ 517 (596)
++.++..+...|....+..+.. .+.-|...|-....+.+|+.+|+.+.+.+..
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 4456666666666555443222 2234566777788888999999998888863
No 298
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=58.09 E-value=56 Score=35.55 Aligned_cols=36 Identities=11% Similarity=0.114 Sum_probs=22.8
Q ss_pred HHHhhccchhHHHHHHHHHHHHhHHHHHHhHHHhhh
Q 007604 480 FFYDQAPESMKSLGTSYSMTTLGVGNFLSSFLLSTV 515 (596)
Q Consensus 480 ~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i 515 (596)
++.....++.++.+.......+.+|-+++-.+.-.+
T Consensus 142 WALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 142 WALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred hhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 333445677777777776666667777766655444
No 299
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=49.74 E-value=68 Score=23.16 Aligned_cols=34 Identities=9% Similarity=-0.054 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHH
Q 007604 76 TNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFF 109 (596)
Q Consensus 76 ~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~ 109 (596)
.....+.++.....|+..|+++|.++...+..++
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 3445566677788899999998986665544333
No 300
>PF12832 MFS_1_like: MFS_1 like family
Probab=49.63 E-value=24 Score=27.66 Aligned_cols=30 Identities=13% Similarity=0.119 Sum_probs=25.1
Q ss_pred cccccccchhHHHHHHHHHHhHHHHHhhhc
Q 007604 372 PPASLTGFVTLSMLVCVVLYDRCFVRITRR 401 (596)
Q Consensus 372 ~~~~~~~~~~~~~~i~~~l~~~~~~~l~~r 401 (596)
..+.+..+.++..+++.|+.+.+.||..++
T Consensus 36 ~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 36 QIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 346677788889999999999999888877
No 301
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=48.11 E-value=28 Score=27.60 Aligned_cols=46 Identities=13% Similarity=0.084 Sum_probs=17.2
Q ss_pred HHHHHHHHHhhccccccCCCchhhhHHHHHHhhhhchhhhcccccC
Q 007604 550 LNFVFFLVVAKFYVYKAEVSDSMEVLTEELKRLWLTDSVVDSHENQ 595 (596)
Q Consensus 550 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (596)
+..++..+..++|++..++..=.....+-.++..+.+.+++.++|+
T Consensus 18 iaIvvW~iv~ieYrk~~rqrkId~li~RIreraEDSGnES~Gd~Ee 63 (81)
T PF00558_consen 18 IAIVVWTIVYIEYRKIKRQRKIDRLIERIRERAEDSGNESDGDEEE 63 (81)
T ss_dssp HHHHHHHHH------------CHHHHHHHHCTTTCCHCTTTTCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcccccCCCCCCCcHHH
Confidence 3344444555666655555333333444455666666666655554
No 302
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=47.68 E-value=30 Score=34.12 Aligned_cols=60 Identities=13% Similarity=0.109 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHH---------hhhhcchhHHH
Q 007604 42 EVFERMAYHGISSNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGV---------AEAYLGRYWTF 103 (596)
Q Consensus 42 ~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~l---------aD~~~Grk~~~ 103 (596)
.+.+-.+--...+++..|++ +.|.++.+...+..+..+..++..++.|.+ .||+ |||+..
T Consensus 26 HmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 26 HMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred HHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 44444554555677888887 678999888899999999999999998754 5787 998754
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.06 E-value=1.2e+02 Score=25.41 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=27.7
Q ss_pred ccchhHHHHHHHHHHHHhHHHHHHhHHHhhhhccc
Q 007604 485 APESMKSLGTSYSMTTLGVGNFLSSFLLSTVSDIT 519 (596)
Q Consensus 485 ~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~i~~~~ 519 (596)
..++.++.++++-...-.+++.+-.+..+++.+..
T Consensus 35 ~a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 35 SAESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34577888888888888888888888888887644
No 304
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=37.90 E-value=5e+02 Score=27.20 Aligned_cols=97 Identities=13% Similarity=0.216 Sum_probs=61.4
Q ss_pred HHHHHHHhhhcCCChhhhhhHHHHHHHHHHHhhhhhHHHhhhhcchhHHHHHHHHHHHHH-----HHHHHHHhhccCCCC
Q 007604 54 SNLVMYLTDKLHHGTVKSANNVTNWGGTIWVTPIFGAGVAEAYLGRYWTFVIAFFFYLMG-----MIVLALSVSLSGLKP 128 (596)
Q Consensus 54 ~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grk~~~~~~~~~~~i~-----~~~~~~~~~~~~~~~ 128 (596)
.-+..|+ +|-+..|.+.+++.|..+..+|+...=++.|.- -.-+-+..=+++..+| .+-+.++.. .
T Consensus 31 ~tLatyL---lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vElllgligg~Sa~~ly~~FA~~----~- 101 (508)
T COG4262 31 GTLATYL---LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELLLGLIGGVSAAALYLLFALE----S- 101 (508)
T ss_pred HHHHHHh---cCCceeehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHHHHHhccchHHHHHHHHHhc----c-
Confidence 4455554 466778999999999999999998888887754 2222222222222221 111123321 1
Q ss_pred CCCCCCCCccccccccchhHHHHHHHHHHHHhccCcccchhhhhhc
Q 007604 129 PPCNDINSQDCRKASTLQLGTFFAALYTLAVGTGGTKPNILTIAAD 174 (596)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 174 (596)
......+++.-.++|.-.|...|....+...
T Consensus 102 ---------------~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 102 ---------------APSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred ---------------chHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 1156677888889999999999999888776
No 305
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=37.80 E-value=24 Score=32.12 Aligned_cols=27 Identities=15% Similarity=0.182 Sum_probs=13.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccc
Q 007604 537 LDYYYAFFAILNVLNFVFFLVVAKFYV 563 (596)
Q Consensus 537 ~~~~f~~~~~~~~v~~~~~~~~~~~~~ 563 (596)
.+-.++++++++.+.++.+++-..|.+
T Consensus 94 l~R~~~Vl~g~s~l~i~yfvir~~R~r 120 (163)
T PF06679_consen 94 LKRALYVLVGLSALAILYFVIRTFRLR 120 (163)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 344566666666655554444433333
No 306
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=34.56 E-value=1.1e+02 Score=24.55 Aligned_cols=69 Identities=16% Similarity=0.125 Sum_probs=42.6
Q ss_pred HHHhccCcccchhhhhhccCCCCChhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHH
Q 007604 157 LAVGTGGTKPNILTIAADQFDEFEPKEKAHKLSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIA 234 (596)
Q Consensus 157 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 234 (596)
+|+|.-.+.|..|.+..|.--+. ..-++....+.+|..+|.+...++......+..+..+.+...+..+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~---------~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~ 72 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSL---------SQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTA 72 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 45555566777777777754433 2245566677788888887777776655555555555554444433
No 307
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=31.62 E-value=93 Score=24.41 Aligned_cols=41 Identities=7% Similarity=0.369 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccchhhhHHHHHHHHHHHHH
Q 007604 192 NWWMFSIFFGTLLGNTVLVYIQDDVGWALGYGLPALGLAIAIAI 235 (596)
Q Consensus 192 ~~~~~~~~ig~~l~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (596)
-+.+....++++++- +.||+.++ .+..+++.++..++++++
T Consensus 11 ~l~~~il~~~~iisf-i~Gy~~q~--~~~~~~~~~~g~~~~~lv 51 (76)
T PF06645_consen 11 KLMQYILIISAIISF-IVGYITQS--FSYTFYIYGAGVVLTLLV 51 (76)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHhh
Confidence 345556667777666 66777665 456666666655555444
No 308
>PRK11588 hypothetical protein; Provisional
Probab=29.89 E-value=4.2e+02 Score=29.04 Aligned_cols=17 Identities=12% Similarity=0.095 Sum_probs=9.3
Q ss_pred HHHHhHHHHHhhhcccC
Q 007604 388 VVLYDRCFVRITRRWTK 404 (596)
Q Consensus 388 ~~l~~~~~~~l~~r~~~ 404 (596)
.-..+..+.++.||..+
T Consensus 129 TGAi~~~i~~l~~k~~~ 145 (506)
T PRK11588 129 TGTIDNGILALIRKTRG 145 (506)
T ss_pred hchHHHHHHHHHHHhCC
Confidence 33455555666666543
No 309
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=28.92 E-value=5e+02 Score=24.45 Aligned_cols=40 Identities=5% Similarity=-0.020 Sum_probs=20.3
Q ss_pred HHHHHHHHHhhhhhHHHhh---hhcchhHHHHHHHHHHHHHHHH
Q 007604 76 TNWGGTIWVTPIFGAGVAE---AYLGRYWTFVIAFFFYLMGMIV 116 (596)
Q Consensus 76 ~~~~~~~~~~~~~~G~laD---~~~Grk~~~~~~~~~~~i~~~~ 116 (596)
.....+..+|..+++.+.+ +. .+|+.....+.+..+....
T Consensus 53 ~~~i~~F~~G~~~~~~i~~~~~~~-~~~~~~~~~l~~~~~ll~~ 95 (209)
T PF06912_consen 53 LLAILSFILGAFLAGLIVRRSRRR-RRRRWYRILLLLEAILLLI 95 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc-chhHHHHHHHHHHHHHHHH
Confidence 3445566667777777722 22 3444444454444443333
No 310
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=27.56 E-value=2e+02 Score=23.92 Aligned_cols=23 Identities=0% Similarity=-0.119 Sum_probs=12.6
Q ss_pred HHhhhhhHHHhhhhcchhHHHHH
Q 007604 83 WVTPIFGAGVAEAYLGRYWTFVI 105 (596)
Q Consensus 83 ~~~~~~~G~laD~~~Grk~~~~~ 105 (596)
.+...+.|..-|+.+|-++.+.+
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl 78 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTL 78 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHH
Confidence 34445556666666676554433
No 311
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=27.01 E-value=4.5e+02 Score=26.17 Aligned_cols=28 Identities=7% Similarity=-0.127 Sum_probs=16.8
Q ss_pred HHHHHHHHhhhhhHHHhhhhcchhHHHH
Q 007604 77 NWGGTIWVTPIFGAGVAEAYLGRYWTFV 104 (596)
Q Consensus 77 ~~~~~~~~~~~~~G~laD~~~Grk~~~~ 104 (596)
++..+..+|+..-|...-...-||+-+.
T Consensus 149 ~fv~g~~~G~~~ig~~nkt~~kRk~fi~ 176 (267)
T PF07672_consen 149 LFVAGYFLGPFTIGLWNKTNYKRKPFIH 176 (267)
T ss_pred HHHHHHhhhceeeccchhhhhhhhhHHH
Confidence 4555666777777777655445665444
No 312
>PRK10263 DNA translocase FtsK; Provisional
Probab=26.86 E-value=2.6e+02 Score=34.38 Aligned_cols=13 Identities=23% Similarity=0.266 Sum_probs=6.2
Q ss_pred HhhhhhHHHhhhh
Q 007604 84 VTPIFGAGVAEAY 96 (596)
Q Consensus 84 ~~~~~~G~laD~~ 96 (596)
.+..+|.|++|.+
T Consensus 63 l~GiVGA~LAD~L 75 (1355)
T PRK10263 63 LGGMPGAWLADTL 75 (1355)
T ss_pred ccchHHHHHHHHH
Confidence 3444455555544
No 313
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=26.46 E-value=8.3e+02 Score=26.24 Aligned_cols=20 Identities=10% Similarity=0.105 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 007604 415 MGIGLVIHIIIMVIASFTER 434 (596)
Q Consensus 415 l~~g~~l~~~~~~~~~~~~~ 434 (596)
.-=|.++.++.++.+.+.|.
T Consensus 298 ~KYgiLFI~LTF~~fflfE~ 317 (430)
T PF06123_consen 298 VKYGILFIGLTFLAFFLFEL 317 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34467777777777777765
No 314
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=26.20 E-value=81 Score=27.28 Aligned_cols=7 Identities=14% Similarity=-0.012 Sum_probs=1.5
Q ss_pred hcccccc
Q 007604 560 KFYVYKA 566 (596)
Q Consensus 560 ~~~~~~~ 566 (596)
+|.++|.
T Consensus 89 rR~~Kk~ 95 (122)
T PF01102_consen 89 RRLRKKS 95 (122)
T ss_dssp HHHS---
T ss_pred HHHhccC
Confidence 3333333
No 315
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.28 E-value=94 Score=25.25 Aligned_cols=31 Identities=10% Similarity=0.194 Sum_probs=21.2
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhccccccch
Q 007604 188 LSFFNWWMFSIFFGTLLGNTVLVYIQDDVGWA 219 (596)
Q Consensus 188 ~~~~~~~~~~~~ig~~l~~~~~~~l~~~~g~~ 219 (596)
..+=-+++....+|+++|- +-|+..+..+|.
T Consensus 22 kkaEr~~q~ilti~aiVg~-i~Gf~~Qqls~t 52 (101)
T KOG4112|consen 22 KKAERFQQLILTIGAIVGF-IYGFAQQQLSVT 52 (101)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 3444466778889998887 556666667664
No 316
>COG3619 Predicted membrane protein [Function unknown]
Probab=21.33 E-value=7.6e+02 Score=23.94 Aligned_cols=29 Identities=7% Similarity=-0.228 Sum_probs=14.1
Q ss_pred ChhhhhhHHHHHHHHHHHhhhhhHHHhhh
Q 007604 67 GTVKSANNVTNWGGTIWVTPIFGAGVAEA 95 (596)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~G~laD~ 95 (596)
++...........+...++...+..+..|
T Consensus 53 ~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~ 81 (226)
T COG3619 53 GDAALAVLLLLPILAFVLGVAAAELISRR 81 (226)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555566664444444443
No 317
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=21.10 E-value=1.2e+03 Score=26.73 Aligned_cols=47 Identities=13% Similarity=0.043 Sum_probs=29.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCccccCCcceehhHHHHHHHHHHHHHHHHHhhhh
Q 007604 411 LLQRMGIGLVIHIIIMVIASFTERYRLSVAKDHGIVEKGQQVPLTIFIMLPQFVLMGTADAFLEVAK 477 (596)
Q Consensus 411 ~~~~l~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~l~g~~~~~~~~~~ 477 (596)
+.+.+.++.++.+++.+...+.. ...|++.+.+++.+++.++....+
T Consensus 56 R~~~l~it~~~f~i~sl~v~ll~--------------------~~p~~~~~~l~~~tf~~~mlga~G 102 (701)
T TIGR01667 56 RLKNLIITLSCFSIASFLVQLLF--------------------PKPWLFPFLLTLLTFGFILLGALG 102 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--------------------cchHHHHHHHHHHHHHHHHHHHhh
Confidence 34667777777777765555432 355666776777777666655544
No 318
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.89 E-value=46 Score=29.06 Aligned_cols=12 Identities=0% Similarity=-0.465 Sum_probs=5.4
Q ss_pred hhhhHHHHHHHH
Q 007604 219 ALGYGLPALGLA 230 (596)
Q Consensus 219 ~~~f~~~~~~~~ 230 (596)
||++++.+++++
T Consensus 1 RW~l~~iii~~i 12 (130)
T PF12273_consen 1 RWVLFAIIIVAI 12 (130)
T ss_pred CeeeHHHHHHHH
Confidence 455554444333
Done!