Your job contains 1 sequence.
>007606
MRTQTFRPFRRGTNLDSGFLQRGQRLASNGYNIMSTSLDNHINRIVDPRGPFWNWIWLAV
RIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRTIFDFFNIIYSSSTPHKHSRAN
AKKCFYLNSFLKDLLSCLPIPQLVTSIIIITSKGSGFFPAMVFGALWYFMAIERETECWK
KACREHTECYQNSFHCYETVGNYTFLTGLCPTMIQDTTMFNFGMFQEAIQSGMVEEKAFK
KKFIYCFRWGLQTVSCAGQNLQTSTHEGENLLASFIIIASLLLLLLVLGNLTIYLQSGTI
KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVENLLNNLPVNLNWEM
KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFITQGTLL
TTTTNGGRNTSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT
DDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVIQAAWCRYKKRKLEGSLYAKEN
ILQDQKAEAGGKPSKFGTAIYATQFFTYVRRSVKRNGGLPGGRVNITLAASETTRS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007606
(596 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2163776 - symbol:CNGC1 "cyclic nucleotide gate... 865 1.7e-103 2
TAIR|locus:2039084 - symbol:CNGC3 "cyclic nucleotide gate... 754 6.3e-89 2
TAIR|locus:2125206 - symbol:CNGC13 "cyclic nucleotide-gat... 724 1.0e-86 2
TAIR|locus:2061401 - symbol:CNGC6 "cyclic nucleotide-gate... 701 5.7e-84 2
TAIR|locus:2118836 - symbol:CNGC9 "cyclic nucleotide gate... 681 1.2e-81 2
TAIR|locus:2174448 - symbol:CNGC5 "cyclic nucleotide gate... 655 6.6e-79 2
TAIR|locus:2013139 - symbol:CNGC8 "cyclic nucleotide gate... 632 2.9e-76 2
TAIR|locus:2200502 - symbol:CNGC7 "cyclic nucleotide gate... 640 3.2e-75 2
TAIR|locus:2062814 - symbol:CNGC15 "cyclic nucleotide-gat... 603 1.2e-69 2
TAIR|locus:2039099 - symbol:CNGC11 "cyclic nucleotide-gat... 598 6.0e-68 2
TAIR|locus:2118816 - symbol:CNGC17 "cyclic nucleotide-gat... 558 8.3e-68 3
TAIR|locus:2185510 - symbol:CNGC18 "AT5G14870" species:37... 546 4.2e-63 2
TAIR|locus:2046703 - symbol:CNGC14 "cyclic nucleotide-gat... 551 1.8e-62 2
TAIR|locus:2097860 - symbol:CNGC16 "cyclic nucleotide-gat... 514 3.3e-59 2
TAIR|locus:2039114 - symbol:CNGC12 "cyclic nucleotide-gat... 508 7.8e-58 2
TAIR|locus:2162605 - symbol:CNGC4 "AT5G54250" species:370... 364 7.1e-39 3
TAIR|locus:2180867 - symbol:DND1 "AT5G15410" species:3702... 340 3.7e-32 3
TAIR|locus:2090562 - symbol:CNGC19 "cyclic nucleotide gat... 296 1.7e-29 2
TAIR|locus:2090572 - symbol:CNBT1 "cyclic nucleotide-bind... 259 5.9e-23 2
ZFIN|ZDB-GENE-090312-121 - symbol:cnga3b "cyclic nucleoti... 141 4.6e-06 1
ZFIN|ZDB-GENE-090611-2 - symbol:cnga3a "cyclic nucleotide... 138 1.2e-05 2
RGD|70948 - symbol:Cnga3 "cyclic nucleotide gated channel... 125 3.8e-05 1
UNIPROTKB|F1LR88 - symbol:Cnga3 "Protein Cnga3" species:1... 125 0.00020 1
UNIPROTKB|F1NAI9 - symbol:CNGA2 "Uncharacterized protein"... 120 0.00022 2
UNIPROTKB|F1NEW7 - symbol:CNGA3 "Uncharacterized protein"... 128 0.00026 2
UNIPROTKB|Q90805 - symbol:Q90805 "Cyclic nucleotide-gated... 128 0.00026 2
UNIPROTKB|Q90980 - symbol:Q90980 "Cyclic nucleotide-gated... 123 0.00036 1
UNIPROTKB|I3LSH4 - symbol:LOC100739165 "Uncharacterized p... 123 0.00037 2
UNIPROTKB|Q16281 - symbol:CNGA3 "Cyclic nucleotide-gated ... 128 0.00048 3
UNIPROTKB|E9PF93 - symbol:CNGA3 "Cyclic nucleotide-gated ... 128 0.00049 3
UNIPROTKB|F1MBN0 - symbol:CNGA2 "Cyclic nucleotide-gated ... 117 0.00073 2
UNIPROTKB|Q03041 - symbol:CNGA2 "Cyclic nucleotide-gated ... 117 0.00073 2
UNIPROTKB|F1S3S4 - symbol:CNGA1 "Uncharacterized protein"... 120 0.00083 1
UNIPROTKB|F1S3S0 - symbol:CNG-1 "Uncharacterized protein"... 120 0.00083 1
>TAIR|locus:2163776 [details] [associations]
symbol:CNGC1 "cyclic nucleotide gated channel 1"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISS] [GO:0005516 "calmodulin binding"
evidence=ISS;TAS;IPI] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide
binding" evidence=ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005242 "inward rectifier potassium channel
activity" evidence=IGI] [GO:0005221 "intracellular cyclic
nucleotide activated cation channel activity" evidence=IGI]
[GO:0006813 "potassium ion transport" evidence=IGI] [GO:0006816
"calcium ion transport" evidence=IGI] InterPro:IPR005821
Pfam:PF00520 PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006813 GO:GO:0006816
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 GO:GO:0005221 EMBL:Y16327
EMBL:AB025622 EMBL:AF370139 EMBL:BT000991 IPI:IPI00542122
PIR:T51354 RefSeq:NP_200125.1 UniGene:At.21042 UniGene:At.49166
ProteinModelPortal:O65717 SMR:O65717 STRING:O65717 TCDB:1.A.1.5.5
PaxDb:O65717 PRIDE:O65717 EnsemblPlants:AT5G53130.1 GeneID:835393
KEGG:ath:AT5G53130 GeneFarm:2463 TAIR:At5g53130 eggNOG:NOG322726
InParanoid:O65717 OMA:LDIIVRF PhylomeDB:O65717
ProtClustDB:CLSN2686516 Genevestigator:O65717 GermOnline:AT5G53130
Uniprot:O65717
Length = 716
Score = 865 (309.6 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 177/421 (42%), Positives = 244/421 (57%)
Query: 162 VFGALWYFMAIERETECWKKAC-REHTECYQNSFHCY-ETVGNYTFLTGLCPTMIQDTTM 219
VFGA WY +IERET CWK+AC R + C +C ET G FL CP +TT+
Sbjct: 272 VFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETAGGNAFLNESCPIQTPNTTL 331
Query: 220 FNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXX 279
F+FG+F +A+QSG+VE + F +KF YCF WGLQ +S GQNL+TST+ E
Sbjct: 332 FDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLGQNLKTSTYIWEICFAVFISIA 391
Query: 280 XXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQE 339
QS T +LEE++ K R+ EQW + +L ++L++R+R ++QY WQE
Sbjct: 392 GLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPENLRKRIRRYEQYKWQE 451
Query: 340 MRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQEC 399
RG+D E ++K LCL +L +VPMF+ M + +L +C L+PVLY +E
Sbjct: 452 TRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALCDRLQPVLYTEES 511
Query: 400 CIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSN 459
IV+EGDP+ EM FI + +YL GDF GEEL T ALDP SN
Sbjct: 512 YIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEYLGAGDFCGEELLTWALDPHSSSN 571
Query: 460 IPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKACVI 519
+P S + ++ VEAFA+ DDL+ + Q+ R H+ Q F++YSQ+W+T AC I
Sbjct: 572 LPISTRTVRALMEVEAFALKADDLKFVASQF--RRLHSKQLRHTFRYYSQQWKTWAACFI 629
Query: 520 QAAWCRYKKRKLEGSLYAKENILQDQKA-EAGGKPSKFGTAIYATQFFTYVRRSVKRNGG 578
QAAW RY K+KLE SL +EN LQD A EA G G IYA++F + R+++R+G
Sbjct: 630 QAAWRRYIKKKLEESLKEEENRLQDALAKEACGSSPSLGATIYASRFAANILRTIRRSGS 689
Query: 579 L 579
+
Sbjct: 690 V 690
Score = 180 (68.4 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 49/132 (37%), Positives = 74/132 (56%)
Query: 43 NRIVDPRGPF---WNWIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRT 99
++I+DP+GPF WN I++ II+ SLDPLFFY+ +++D KKC+ +D K+ I A LR+
Sbjct: 82 HKILDPQGPFLQRWNKIFVLACIIAVSLDPLFFYVPIIDDAKKCLGIDKKMEITASVLRS 141
Query: 100 IFDFF---NIIYSSSTPH--KHSRANAKKCF----------YLNS-FLKDLLSCLPIPQL 143
D F +II+ T SR + YL+S F+ D+L+ LP+PQ+
Sbjct: 142 FTDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIAKRYLSSHFIIDILAVLPLPQM 201
Query: 144 VXXXXXXXXKGS 155
V +GS
Sbjct: 202 VILIIIPHMRGS 213
>TAIR|locus:2039084 [details] [associations]
symbol:CNGC3 "cyclic nucleotide gated channel 3"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=TAS] InterPro:IPR005821
Pfam:PF00520 PROSITE:PS50096 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC006526 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0005216 GO:GO:0030552 GO:GO:0030553
UniGene:At.19641 UniGene:At.36508 HOGENOM:HOG000238338 KO:K05391
EMBL:Y17911 EMBL:AF107726 EMBL:AY058167 IPI:IPI00548977 PIR:G84902
RefSeq:NP_001118537.1 RefSeq:NP_566075.1 UniGene:At.67271
ProteinModelPortal:Q9SKD7 SMR:Q9SKD7 STRING:Q9SKD7 TCDB:1.A.1.5.8
EnsemblPlants:AT2G46430.1 EnsemblPlants:AT2G46430.2 GeneID:819251
KEGG:ath:AT2G46430 GeneFarm:2465 TAIR:At2g46430 eggNOG:NOG294759
InParanoid:Q9SKD7 OMA:REACAKI PhylomeDB:Q9SKD7
ProtClustDB:CLSN2917345 Genevestigator:Q9SKD7 GermOnline:AT2G46430
Uniprot:Q9SKD7
Length = 706
Score = 754 (270.5 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 161/429 (37%), Positives = 236/429 (55%)
Query: 162 VFGALWYFMAIERETECWKKACREHTECYQNSFHCYET-VGNYTFLTGLCPTM----IQD 216
VFG+ WY ++IER+ CW++AC + C +C T N FL G CP + I +
Sbjct: 260 VFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTGEDNRLFLNGSCPLIDPEEITN 319
Query: 217 TTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXX 276
+T+FNFG+F +A+QSG+VE + F KKF YCF WGL+ +S GQNL+TS EGE
Sbjct: 320 STVFNFGIFADALQSGVVESRDFPKKFFYCFWWGLRNLSALGQNLKTSAFEGEIIFAIVI 379
Query: 277 XXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYV 336
QS T+++EE++ K R+ EQW + ML L++R+R ++QY
Sbjct: 380 CISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMSHRMLPDDLRKRIRKYEQYK 439
Query: 337 WQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYV 396
WQE +G++ E ++K LCL++LKKVP FQ M +L +C LK VLY
Sbjct: 440 WQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKVPWFQAMDDRLLDALCARLKTVLYT 499
Query: 397 QECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDP 456
++ IV+EG+P+ +M FI L GDF G+ L T ALDP
Sbjct: 500 EKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLVAGDFCGD-LLTWALDPLS 558
Query: 457 LSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKA 516
S P S+ + ++T VE F ++ DDL+ + QY R H+ Q +F+FYS +W+T A
Sbjct: 559 -SQFPISSRTVQALTEVEGFLLSADDLKFVATQY--RRLHSKQLRHMFRFYSVQWQTWAA 615
Query: 517 CVIQAAWCRYKKRKLEGSLYAKENILQD--QKAEAGGKPSKFGTAIYATQFFTYVRRSVK 574
C IQAAW R+ +RKL +L +E L + Q ++GG G AIYA++F ++ R+++
Sbjct: 616 CFIQAAWKRHCRRKLSKALREEEGKLHNTLQNDDSGGNKLNLGAAIYASRFASHALRNLR 675
Query: 575 RNGGLPGGR 583
N R
Sbjct: 676 ANAAARNSR 684
Score = 153 (58.9 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 45/122 (36%), Positives = 63/122 (51%)
Query: 42 INRIVDPRGPF---WNWIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLR 98
I R+++P + WN I+L + +++ + DPLFFYI V + C++LD KL IA R
Sbjct: 69 ILRVMNPNDSYLQSWNKIFLLLSVVALAFDPLFFYIPYVKPERFCLNLDKKLQTIACVFR 128
Query: 99 TIFDFFNIIYS-----------SSTPHKHSRANAKK----CFYLNS-FLKDLLSCLPIPQ 142
T D F +++ SS+ N K YL S FL DLLS LPIPQ
Sbjct: 129 TFIDAFYVVHMLFQFHTGFITPSSSGFGRGELNEKHKDIALRYLGSYFLIDLLSILPIPQ 188
Query: 143 LV 144
+V
Sbjct: 189 VV 190
>TAIR|locus:2125206 [details] [associations]
symbol:CNGC13 "cyclic nucleotide-gated channel 13"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0030551
"cyclic nucleotide binding" evidence=ISS] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009693 "ethylene biosynthetic process"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0045087 "innate immune
response" evidence=RCA] [GO:0050832 "defense response to fungus"
evidence=RCA] InterPro:IPR005821 Pfam:PF00520 PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042
GO:GO:0005216 GO:GO:0030552 EMBL:AL161491 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 EMBL:AL080237 IPI:IPI00532704
PIR:D85013 RefSeq:NP_192010.2 UniGene:At.54067
ProteinModelPortal:Q9LD40 SMR:Q9LD40 STRING:Q9LD40
EnsemblPlants:AT4G01010.1 GeneID:826427 KEGG:ath:AT4G01010
GeneFarm:2779 TAIR:At4g01010 eggNOG:NOG285377 InParanoid:Q9LD40
OMA:FIDAFYI PhylomeDB:Q9LD40 ProtClustDB:CLSN2687606
Genevestigator:Q9LD40 GermOnline:AT4G01010 Uniprot:Q9LD40
Length = 696
Score = 724 (259.9 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 160/430 (37%), Positives = 234/430 (54%)
Query: 162 VFGALWYFMAIERETECWKKACREHTE-CYQNSFHC--YETVGNYTFLTGLCPTM----I 214
VFGALWY +++ERE CW++AC + E C +C +V N FLT CP + I
Sbjct: 256 VFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDGNSSVRN-DFLTTSCPFINPDDI 314
Query: 215 QDTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXX 274
++T+FNFG+F +A++SG+VE F KKF YCF WGL+ +S GQNL TS GE
Sbjct: 315 TNSTVFNFGIFTDALKSGIVESDDFWKKFFYCFWWGLRNLSALGQNLNTSKFVGEIIFAV 374
Query: 275 XXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQ 334
+S T++ EE++ + R+ EQW + ML L++R+R ++Q
Sbjct: 375 SICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPDDLRKRIRRYEQ 434
Query: 335 YVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVL 394
Y WQE RG++ E ++K CL++LKKVP+F++M + +L +C LKPVL
Sbjct: 435 YKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVL 494
Query: 395 YVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDP 454
Y + ++EGDP+ EM F+ YL DF GE+L T ALDP
Sbjct: 495 YTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAVYLKPSDFCGEDLLTWALDP 554
Query: 455 DPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTS 514
S+ P S + ++T VEAFA+ DDL+ + Q+ R H+ Q F+FYS +WRT
Sbjct: 555 QSSSHFPISTRTVQALTEVEAFALAADDLKLVASQF--RRLHSKQLQHTFRFYSVQWRTW 612
Query: 515 KACVIQAAWCRYKKRKLEGSLYAKE----NILQDQKAEAGGKPSKFGTAIYATQFFTYVR 570
A IQAAW R+ +RKL SL +E N + ++ A S T +YA++F +
Sbjct: 613 GASFIQAAWRRHCRRKLARSLTEEEDRFRNAITKRERNAASSSSLVAT-LYASRFASNAL 671
Query: 571 RSVKRNGGLP 580
R+++ N LP
Sbjct: 672 RNLRTNN-LP 680
Score = 162 (62.1 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 55/154 (35%), Positives = 76/154 (49%)
Query: 10 RRGTNLDSGFLQRGQRLASNGYNIMSTSLDNHINRIVDPRGPF---WNWIWLAVRIISTS 66
RRG F ++ SN ST+ +I ++P+G F WN I+L +I+ +
Sbjct: 40 RRGLKKPLSFGSHNKKRDSNS----STTTQKNI---INPQGSFLQNWNKIFLFASVIALA 92
Query: 67 LDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRTIFDFFNII---------YSSSTPHKHS 117
+DPLFFYI +V+ + C++L L I A LRT D F II Y S +
Sbjct: 93 IDPLFFYIPIVDGERHCLNLHRNLEIAASVLRTFIDAFYIIHIVFQFRTAYISPSSRVFG 152
Query: 118 RANA---KKCF---YLNS-FLKDLLSCLPIPQLV 144
R K YL+S F+ DLLS LP+PQLV
Sbjct: 153 RGELVDDPKAIAIKYLSSYFIIDLLSILPLPQLV 186
>TAIR|locus:2061401 [details] [associations]
symbol:CNGC6 "cyclic nucleotide-gated channel 6"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006813 "potassium ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=TAS;IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0006486
"protein glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0009294 "DNA mediated
transformation" evidence=RCA] InterPro:IPR000048 InterPro:IPR003938
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01463 PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 GO:GO:0046686
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005249
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 eggNOG:NOG291133 EMBL:Y17914
EMBL:AC005170 IPI:IPI00516555 PIR:B84631 PIR:T52572
RefSeq:NP_565560.1 UniGene:At.402 PDB:1WGP PDBsum:1WGP
ProteinModelPortal:O82226 SMR:O82226 STRING:O82226 PaxDb:O82226
PRIDE:O82226 EnsemblPlants:AT2G23980.1 GeneID:816931
KEGG:ath:AT2G23980 GeneFarm:2470 TAIR:At2g23980 InParanoid:O82226
OMA:FLTIERE PhylomeDB:O82226 ProtClustDB:CLSN2685623
EvolutionaryTrace:O82226 Genevestigator:O82226 GermOnline:AT2G23980
Uniprot:O82226
Length = 747
Score = 701 (251.8 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 154/428 (35%), Positives = 220/428 (51%)
Query: 162 VFGALWYFMAIERETECWKKACREHTECYQNSFHC-------YETVGNY--TFLTGLCPT 212
+ GALWY +A+ER +CW KAC + C +N C Y N ++L CP
Sbjct: 291 IVGALWYLLALERNNDCWSKACHNNQNCTRNFLFCGNQNMKGYAAWDNIKVSYLQLKCPV 350
Query: 213 MI--QDTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGEN 270
+ + F+FG++ A+ SG+V K F K+ +C WGLQ +S GQ L+TST+ GE
Sbjct: 351 NVPEDEEPPFDFGIYLRALSSGIVSSKNFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEV 410
Query: 271 XXXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVR 330
QS TI+LEE++ K R+ EQW ML L++RVR
Sbjct: 411 IFSITLAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVR 470
Query: 331 NHQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCL 390
+ QY W E RG+D E ++K LCL ++++VP+F+ M + +L +C+ L
Sbjct: 471 RYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERL 530
Query: 391 KPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATS 450
KP L+ ++ +V+EGDP+ EM FI + L GDF G+EL T
Sbjct: 531 KPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTW 590
Query: 451 ALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQE 510
ALDP SN+P S + ++T VEAFA+ D+L+ + Q+ R H+ Q F+FYSQ+
Sbjct: 591 ALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQF--RRLHSRQVQHTFRFYSQQ 648
Query: 511 WRTSKACVIQAAWCRYKKRKLEGSLYAKENILQDQKAE--AGGKPSKFGTAIYATQFFTY 568
WRT AC +QAAW RY KRK L +E + A AGG P A++F
Sbjct: 649 WRTWAACFMQAAWRRYIKRKKLEQLRKEEEEEEAAAASVIAGGSPYSIRATFLASKFAAN 708
Query: 569 VRRSVKRN 576
RSV +N
Sbjct: 709 ALRSVHKN 716
Score = 159 (61.0 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 56/197 (28%), Positives = 91/197 (46%)
Query: 9 FRRGTNLDSGFLQRGQRLASNGYNIMSTSLDNHINRIV-------------DPRGPFW-- 53
F +G+ SG ++G R S G + S+ ++R V DP+ F
Sbjct: 54 FAQGSKASSGSFKKGFRKGSEGLWSIGRSIGLGVSRAVFPEDLEVSEKKIFDPQDKFLLL 113
Query: 54 -NWIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRTIFDFFNIIYSS-- 110
N +++A I++ S+DPLF Y+ +ND KCV +D KLAII ++RT+ D F + + +
Sbjct: 114 CNKLFVASCILAVSVDPLFLYLPFINDKAKCVGIDRKLAIIVTTIRTVIDSFYLFHMALR 173
Query: 111 -STPH--KHSR-----------ANAKKCFYLNSFLKDLLSCLPIPQLVXXXXXXXXKGSG 156
T + SR A K + F+ DLLS LP+PQ++ +G+
Sbjct: 174 FRTAYVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDLLSVLPVPQIIVWRFLYTSRGAN 233
Query: 157 FFPAMVFGALWYFMAIE 173
AL Y + ++
Sbjct: 234 VLATKQ--ALRYIVLVQ 248
>TAIR|locus:2118836 [details] [associations]
symbol:CNGC9 "cyclic nucleotide gated channel 9"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=ISS;TAS;IPI] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006813 "potassium
ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009294 "DNA mediated transformation" evidence=RCA]
InterPro:IPR000048 InterPro:IPR003938 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR01463 PROSITE:PS50096 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0016021 GO:GO:0005886 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016020 GO:GO:0005249 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042
EMBL:AL161577 GO:GO:0030552 GO:GO:0030553 HOGENOM:HOG000238338
KO:K05391 eggNOG:NOG291133 ProtClustDB:CLSN2685623 IPI:IPI00542671
PIR:E85357 RefSeq:NP_194785.1 UniGene:At.54558
ProteinModelPortal:Q9M0A4 SMR:Q9M0A4 PaxDb:Q9M0A4 PRIDE:Q9M0A4
EnsemblPlants:AT4G30560.1 GeneID:829179 KEGG:ath:AT4G30560
GeneFarm:2768 TAIR:At4g30560 InParanoid:Q9M0A4 OMA:NEKCIGI
PhylomeDB:Q9M0A4 Genevestigator:Q9M0A4 GermOnline:AT4G30560
Uniprot:Q9M0A4
Length = 733
Score = 681 (244.8 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 152/426 (35%), Positives = 217/426 (50%)
Query: 162 VFGALWYFMAIERETECWKKACREHT-ECYQNSFHC-YETVGNYTFLTGL--------CP 211
+ GA+WY +A+ER CW K C + +C++N C E + Y T + CP
Sbjct: 291 IVGAIWYLLALERYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQLNCP 350
Query: 212 TMIQDTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENX 271
D F+FG++ A+ SG+V K+F K+ +C WGLQ +S GQ L+TST+ GE
Sbjct: 351 VNTTDNPPFDFGIYLRALSSGIVSSKSFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVI 410
Query: 272 XXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRN 331
QS TI+LEE++ K R+ EQW ML L++RVR
Sbjct: 411 FSIALAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRR 470
Query: 332 HQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLK 391
+ QY W E RG+D E ++K LCL ++++VP+F+ M + +L +C+ LK
Sbjct: 471 YDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLK 530
Query: 392 PVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSA 451
P LY + +V+EGDP+ EM FI + L GDF GEEL T A
Sbjct: 531 PCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWA 590
Query: 452 LDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEW 511
LDP SN+P S ++T VEAFA+ D+L+ + Q+ R H+ Q F+FYSQ+W
Sbjct: 591 LDPKSGSNLPSSTRTAKALTEVEAFALIADELKFVASQF--RRLHSRQVQHTFRFYSQQW 648
Query: 512 RTSKACVIQAAWCRY-KKRKLEGSLYAKENILQDQKAEAGGKPSKFGTAIYATQFFTYVR 570
RT A IQAAW RY KK+KLE L+ ++ E G + A++F
Sbjct: 649 RTWAAIFIQAAWRRYVKKKKLEQ--------LRKEEEEGEGSVTSIRATFLASKFAANAL 700
Query: 571 RSVKRN 576
R V +N
Sbjct: 701 RKVHKN 706
Score = 157 (60.3 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 53/177 (29%), Positives = 84/177 (47%)
Query: 11 RGTNLDSGFLQRGQRLASNGYNIMSTSLDNHINRIV-------------DPRGPFW---N 54
+G N+ SG ++G R S G + S+ ++R V DP+ F N
Sbjct: 56 QGNNVSSGSFKKGFRKGSKGLWSIGRSIGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLCN 115
Query: 55 WIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRTIFDFFNIIYSSSTPH 114
+++ I++ S+DPLF Y+ V D++KC+ +D KLAIIA +LRT+ D F + + +
Sbjct: 116 KLFVTSCILAVSVDPLFLYLPFVKDNEKCIGIDRKLAIIATTLRTVIDAFYLFHMALRFR 175
Query: 115 KHSRANAKKCF---------------YLNS-FLKDLLSCLPIPQLVXXXXXXXXKGS 155
A + + F YL F+ D LS LP+PQ+V KG+
Sbjct: 176 TAFVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQIVVWRFLYISKGA 232
>TAIR|locus:2174448 [details] [associations]
symbol:CNGC5 "cyclic nucleotide gated channel 5"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005267 "potassium channel activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=TAS] InterPro:IPR000048
InterPro:IPR005821 Pfam:PF00520 PROSITE:PS50096 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016020 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042 GO:GO:0005216
EMBL:AB013396 GO:GO:0030552 GO:GO:0030553 HOGENOM:HOG000238338
KO:K05391 EMBL:Y17913 EMBL:AY091133 EMBL:AY114053 IPI:IPI00518325
IPI:IPI00529452 PIR:T52573 RefSeq:NP_200602.2 RefSeq:NP_851209.1
RefSeq:NP_974953.1 UniGene:At.22566 ProteinModelPortal:Q8RWS9
SMR:Q8RWS9 PaxDb:Q8RWS9 PRIDE:Q8RWS9 EnsemblPlants:AT5G57940.1
EnsemblPlants:AT5G57940.2 GeneID:835905 KEGG:ath:AT5G57940
GeneFarm:2467 TAIR:At5g57940 eggNOG:NOG251839 InParanoid:Q8RWS9
OMA:KCLGIDR PhylomeDB:Q8RWS9 ProtClustDB:CLSN2680554
ArrayExpress:Q8RWS9 Genevestigator:Q8RWS9 GermOnline:AT5G57940
Uniprot:Q8RWS9
Length = 717
Score = 655 (235.6 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 146/425 (34%), Positives = 213/425 (50%)
Query: 162 VFGALWYFMAIERETECWKKACREHTECYQNSFHC-YETVGNY--------TFLTGLCPT 212
+ GA WY +A+ER CW++AC + C + +C + + Y + L C
Sbjct: 276 IVGAFWYLLALERNDACWQEACIDAGNCSTDFLYCGNQNMDGYAVWNRAKESVLKSKCRA 335
Query: 213 MIQDTTM-FNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENX 271
+ D F+FG++ +A+ SG+V + F K+ YC WGLQ +S GQ L+TST+ E
Sbjct: 336 DLDDNNPPFDFGIYTQALSSGIVSSQNFIVKYCYCLWWGLQNLSTLGQGLETSTYPMEII 395
Query: 272 XXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRN 331
QS TI+LEE++ K R+ EQW ML Q L++RVR
Sbjct: 396 FSISLAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPQDLRERVRR 455
Query: 332 HQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLK 391
+ QY W E RG+D E ++K LCL ++++VP+F+ M +L +C LK
Sbjct: 456 YDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRVPLFKSMDDKLLDAICMRLK 515
Query: 392 PVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSA 451
P L+ + +V+EGDP+ EM FI + L G+F GEEL T A
Sbjct: 516 PCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWA 575
Query: 452 LDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEW 511
LDP N+P S + ++T VEAFA+ +++L+ + Q+ R H+ Q F+FYS +W
Sbjct: 576 LDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFVASQF--RRLHSRQVQHTFRFYSHQW 633
Query: 512 RTSKACVIQAAWCRYKKRKLEGSLYAKENILQDQKAEAGGKPSKFGTAIYATQFFTYVRR 571
RT AC IQAAW RY KRK A+ + A G G A AT+F R
Sbjct: 634 RTWAACFIQAAWRRYCKRKKMEEAEAEAAAVSSSTA---GPSYSIGAAFLATKFAANALR 690
Query: 572 SVKRN 576
++ RN
Sbjct: 691 TIHRN 695
Score = 157 (60.3 bits), Expect = 6.6e-79, Sum P(2) = 6.6e-79
Identities = 53/173 (30%), Positives = 78/173 (45%)
Query: 4 QTFRPFRRGTNLDS-GFLQRGQRLASNGYN-IMSTSLDNHINRIVDPRGPFW---NWIWL 58
+T R F++G S G G+ L Y + L +I DP+ F N +++
Sbjct: 45 ETSRSFKKGIQKGSKGLKSIGRSLGFGVYRAVFPEDLKVSEKKIFDPQDKFLLYCNKLFV 104
Query: 59 AVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRTIFDFFNIIYSSSTPHKHSR 118
A I+S +DP FFY+ V+N KC+ +D KLAI A +LRT D F + + +
Sbjct: 105 ASCILSVFVDPFFFYLPVINAESKCLGIDRKLAITASTLRTFIDVFYLAHMALQLRTAYI 164
Query: 119 ANAKKCF---------------YLNS-FLKDLLSCLPIPQLVXXXXXXXXKGS 155
A + + F YL F+ D LS LP+PQ+V GS
Sbjct: 165 APSSRVFGRGELVIDPAQIAKRYLQRWFIIDFLSVLPLPQIVVWRFLQSSNGS 217
>TAIR|locus:2013139 [details] [associations]
symbol:CNGC8 "cyclic nucleotide gated channel 8"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016020 "membrane" evidence=IEA] [GO:0030551
"cyclic nucleotide binding" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=IGI;RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000048 InterPro:IPR005821 Pfam:PF00520
PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0005216 EMBL:AC007797 EMBL:AC024609
GO:GO:0030552 GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391
eggNOG:NOG291133 IPI:IPI00527954 PIR:H86330 RefSeq:NP_173408.2
UniGene:At.24554 UniGene:At.66905 ProteinModelPortal:Q9FXH6
SMR:Q9FXH6 EnsemblPlants:AT1G19780.1 GeneID:838566
KEGG:ath:AT1G19780 GeneFarm:2766 TAIR:At1g19780 InParanoid:Q9FXH6
OMA:HIVITQY PhylomeDB:Q9FXH6 ProtClustDB:CLSN2679754
Genevestigator:Q9FXH6 GermOnline:AT1G19780 Uniprot:Q9FXH6
Length = 753
Score = 632 (227.5 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 140/390 (35%), Positives = 201/390 (51%)
Query: 162 VFGALWYFMAIERETECWKKACREHTE---CYQNSFHCYETV--GNYTFLTGLCPTMIQ- 215
+ GA WY +++ER C + AC+ + C Q +C + T P + +
Sbjct: 285 ITGAFWYMLSVERNDTCLRSACKVQPDPKVCVQ-ILYCGSKLMSSRETDWIKSVPDLFKN 343
Query: 216 ------DTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGE 269
D + FN+G++ +A+ SG+V F KF YC WGLQ +S GQ LQTST+ GE
Sbjct: 344 NCSAKSDESKFNYGIYSQAVSSGIVSSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTYPGE 403
Query: 270 NXXXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRV 329
QS T++LEE++ K R+ EQW L Q+L++RV
Sbjct: 404 VLFSIAIAVAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERV 463
Query: 330 RNHQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKC 389
R + QY W E RG+D E ++K LCL ++++VP+F M + +L +C+
Sbjct: 464 RRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICER 523
Query: 390 LKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELAT 449
LKP LY + IV+EGDP+ EM FI + L GDF GEEL T
Sbjct: 524 LKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLT 583
Query: 450 SALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQ 509
ALDP SN+P S + ++T VEAFA+ ++L+ + Q+ R H+ Q F+FYSQ
Sbjct: 584 WALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQF--RRLHSRQVQQTFRFYSQ 641
Query: 510 EWRTSKACVIQAAWCRYKKRKLEGSLYAKE 539
+WRT AC IQAAW R+ +RK+ L KE
Sbjct: 642 QWRTWAACFIQAAWRRHLRRKI-AELRRKE 670
Score = 155 (59.6 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 5 TFRPFRRGTNLDSGFLQRGQRLASNGYN--IMSTSLDNHINRIVDPRGP---FWNWIWLA 59
T + FR G + S L+ + ++G + L +I DP+ WN +++
Sbjct: 55 TSKSFREGVKIGSEGLKTIGKSFTSGVTRAVFPEDLRVSEKKIFDPQDKTLLLWNRMFVI 114
Query: 60 VRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRTIFDFFNII---------YSS 110
I++ S+DPLFFY+ +V++ K C+ +D KLA+ +LRTI D F + Y +
Sbjct: 115 SCILAVSVDPLFFYLPIVDNSKNCIGIDSKLAVTTTTLRTIIDVFYLTRMALQFRTAYIA 174
Query: 111 STPHKHSRAN-----AKKCF-YLNS-FLKDLLSCLPIPQLVXXXXXXXXKGSGFFP 159
+ R AK YL F+ D L+ LP+PQ+ KG+ P
Sbjct: 175 PSSRVFGRGELVIDPAKIAERYLTRYFIVDFLAVLPLPQIAVWKFLHGSKGTDVLP 230
>TAIR|locus:2200502 [details] [associations]
symbol:CNGC7 "cyclic nucleotide gated channel 7"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0005516 "calmodulin binding" evidence=ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0009860
"pollen tube growth" evidence=IGI] [GO:0090406 "pollen tube"
evidence=IDA] InterPro:IPR003938 InterPro:IPR005821 Pfam:PF00520
PRINTS:PR01463 PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005249
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 EMBL:AC010924 GO:GO:0030552
GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391 IPI:IPI00525590
IPI:IPI01019556 PIR:E86294 RefSeq:NP_173051.1 UniGene:At.26234
UniGene:At.51627 ProteinModelPortal:Q9S9N5 SMR:Q9S9N5 GeneID:838169
KEGG:ath:AT1G15990 GeneFarm:2762 TAIR:At1g15990 eggNOG:NOG281568
InParanoid:Q9S9N5 PhylomeDB:Q9S9N5 ArrayExpress:Q9S9N5
Genevestigator:Q9S9N5 GermOnline:AT1G15990 Uniprot:Q9S9N5
Length = 738
Score = 640 (230.4 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 138/382 (36%), Positives = 202/382 (52%)
Query: 162 VFGALWYFMAIERETECWKKACREHTE---CYQNSFHC---YETVGNYTFLTGLCPTMIQ 215
+ GA WY +++ER CW+ AC+ + C Q +C + + G ++ + P +++
Sbjct: 279 ITGAFWYMLSVERNDTCWRFACKVQPDPRLCVQ-ILYCGTKFVSSGETEWIKTV-PELLK 336
Query: 216 -------DTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEG 268
D + FN+G++ +AI SG+V F KF YC WGLQ +S GQ LQTST G
Sbjct: 337 SNCSAKADDSKFNYGIYGQAISSGIVSSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTFPG 396
Query: 269 ENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQR 328
E QS T++LEE++ K R+ EQW L Q+L++R
Sbjct: 397 EVLFSIAIAIAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRER 456
Query: 329 VRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCK 388
VR + QY W E RG+D E ++K LCL ++++VP+F M + +L +C+
Sbjct: 457 VRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICE 516
Query: 389 CLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELA 448
LKP L+ + IV+EGDP+ EM FI + L GDF GEEL
Sbjct: 517 RLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELL 576
Query: 449 TSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYS 508
T ALDP SN+P S + ++T VEAFA+ ++L+ + Q+ R H+ Q F+FYS
Sbjct: 577 TWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQF--RRLHSRQVQQTFRFYS 634
Query: 509 QEWRTSKACVIQAAWCRYKKRK 530
Q+WRT +C IQAAW RY +RK
Sbjct: 635 QQWRTWASCFIQAAWRRYSRRK 656
Score = 137 (53.3 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 43/136 (31%), Positives = 64/136 (47%)
Query: 44 RIVDPRGP---FWNWIWLAVRIISTSLDPLFFYIFVV-NDHKKCVDLDIKLAIIAISLRT 99
+I DP+ WN +++ I++ S+DPLFFY+ +V N C+ +D KLA+ +LRT
Sbjct: 89 KIFDPQDKTLLVWNRLFVISCILAVSVDPLFFYLPIVDNSGSSCIGIDTKLAVTTTTLRT 148
Query: 100 IFDFFNII---------YSSSTPHKHSRAN-----AKKCF-YLNS-FLKDLLSCLPIPQL 143
I D F + Y + + R AK YL F+ D L+ LP+PQ+
Sbjct: 149 IVDVFYLTRMALQFRTAYIAPSSRVFGRGELVIDPAKIAERYLTRYFVVDFLAVLPLPQI 208
Query: 144 VXXXXXXXXKGSGFFP 159
KGS P
Sbjct: 209 AVWKFLHGSKGSDVLP 224
>TAIR|locus:2062814 [details] [associations]
symbol:CNGC15 "cyclic nucleotide-gated channel 15"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006813 "potassium
ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030551 "cyclic nucleotide binding" evidence=ISS] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] InterPro:IPR000048 InterPro:IPR003938
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01463 PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005249 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553 HOGENOM:HOG000238338
KO:K05391 EMBL:AC006202 IPI:IPI00539665 PIR:G84682
RefSeq:NP_180393.1 UniGene:At.52949 ProteinModelPortal:Q9SL29
SMR:Q9SL29 EnsemblPlants:AT2G28260.1 GeneID:817372
KEGG:ath:AT2G28260 GeneFarm:2783 TAIR:At2g28260 eggNOG:NOG284924
InParanoid:Q9SL29 OMA:GKDDHRA PhylomeDB:Q9SL29
ProtClustDB:CLSN2683550 Genevestigator:Q9SL29 GermOnline:AT2G28260
Uniprot:Q9SL29
Length = 678
Score = 603 (217.3 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 140/408 (34%), Positives = 201/408 (49%)
Query: 162 VFGALWYFMAIERETECWKKACR-EHTECYQNSFHCY---ETVGNYTFLTGLCPTMIQDT 217
V GA WY +A+ER+ CW+ AC E C F C + N F T+ +
Sbjct: 255 VLGACWYLLAVERQEACWRHACNIEKQICQYRFFECRRLEDPQRNSWFEWSNITTICKPA 314
Query: 218 TMF-NFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXX 276
+ F FG+F +A+ S + K F K+ YC WGL+ +S GQNL TST+ GE
Sbjct: 315 SKFYEFGIFGDAVTSTVTSSK-FINKYFYCLWWGLKNLSSLGQNLATSTYAGEILFAIII 373
Query: 277 XXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYV 336
QS T++LEE + + + EQW L L+Q VR + QY
Sbjct: 374 ATLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWMHHRQLPPELRQAVRKYDQYK 433
Query: 337 WQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYV 396
W RG+D E ++K LC +++++VP+F M + +L +C+ LKP L
Sbjct: 434 WLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCT 493
Query: 397 QECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDP 456
+ +V+EGDP+ EM FI + GDF GEEL T ALDP P
Sbjct: 494 EGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCLIGPGDFCGEELLTWALDPRP 553
Query: 457 LSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWRTSKA 516
+ +P S + ++ VEAFA+ +DL+ + Q+ R H Q F+FYS +WRT A
Sbjct: 554 VVILPSSTRTVKAICEVEAFALKAEDLQFVASQF--RRLHTKQLRHKFRFYSHQWRTWAA 611
Query: 517 CVIQAAWCRYKKRKLEGSLYAKENI-LQDQKAEA-----GGKPSKFGT 558
C IQAAW R++KRK + L AKE + + A A GGK ++ G+
Sbjct: 612 CFIQAAWRRHRKRKYKTELRAKEEFHYRFEAATARLAVNGGKYTRSGS 659
Score = 121 (47.7 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 42/165 (25%), Positives = 83/165 (50%)
Query: 12 GTNLDS-GFLQRGQRLASNGYN-IMSTSLDNHINRIVDPRGPF---WNWIWLAVRIISTS 66
GT +++ + +G+ L + + + S L+ +I+DPRG WN I+L ++S
Sbjct: 33 GTQINNVKMMSKGKFLKAKVLSRVFSEDLERVKTKILDPRGQTIRRWNKIFLIACLVSLF 92
Query: 67 LDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRTIFDFFNII---------YSSSTPHKHS 117
+DPLFF++ V+ + + C+ + ++L ++ +R++ D F I Y +
Sbjct: 93 VDPLFFFLPVMRN-EACITIGVRLEVVLTLIRSLADAFYIAQILIRFRTAYIAPPSRVFG 151
Query: 118 RA----NAKKCF--YLN-SFLKDLLSCLPIPQLVXXXXXXXXKGS 155
R +++K YL+ SF L++ LP+PQ++ +GS
Sbjct: 152 RGELVIDSRKIAWRYLHKSFWIHLVAALPLPQVLIWIIIPNLRGS 196
>TAIR|locus:2039099 [details] [associations]
symbol:CNGC11 "cyclic nucleotide-gated channels"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=ISS] [GO:0005261 "cation
channel activity" evidence=IGI] [GO:0009620 "response to fungus"
evidence=IMP] InterPro:IPR005821 Pfam:PF00520 PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005261 GO:GO:0009620 EMBL:AC006526
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553
EMBL:AK175287 IPI:IPI00526908 PIR:H84902 RefSeq:NP_182167.2
UniGene:At.19641 UniGene:At.36508 ProteinModelPortal:Q9SKD6
SMR:Q9SKD6 STRING:Q9SKD6 EnsemblPlants:AT2G46440.1 GeneID:819252
KEGG:ath:AT2G46440 GeneFarm:2772 TAIR:At2g46440 eggNOG:KOG0498
InParanoid:Q9SKD6 PhylomeDB:Q9SKD6 ProtClustDB:CLSN2681714
Genevestigator:Q9SKD6 GermOnline:AT2G46440 Uniprot:Q9SKD6
Length = 621
Score = 598 (215.6 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 140/412 (33%), Positives = 210/412 (50%)
Query: 162 VFGALWYFMAIERETECWKKACREHTECYQN--SFHCYETVG-NYTFLTGLCPTM----I 214
V GA WY +IER++ CW+ AC ++C C N FL CP + I
Sbjct: 214 VCGAFWYLSSIERKSTCWRAACARTSDCNLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQI 273
Query: 215 QDTTMFNFGMFQEAIQSGMVEEKA--FKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENXX 272
++T F+FGM+ +A++SG++E K F +KF+YCF WGL+ +S GQNL+TS GE
Sbjct: 274 TNSTDFDFGMYIDALKSGVLEVKPKDFPRKFVYCFWWGLRNISALGQNLETSNSAGEIFF 333
Query: 273 XXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRNH 332
QS T +++E++ K R+ E+W ++ + + L++R+R
Sbjct: 334 AIIICVSGLLLFAVLIGNVQKYLQSSTTRVDEMEEKKRDTEKWMSYREIPEYLKERIRRF 393
Query: 333 QQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLKP 392
+ Y W+ +G + E E K L L++LKKVP+ Q M +L +C LK
Sbjct: 394 EDYKWRRTKGTEEEALLRSLPKDLRLETKRYLFLKLLKKVPLLQAMDDQLLDALCARLKT 453
Query: 393 VLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSAL 452
V Y ++ IV+EG+P+ +M FI L GD G+ L T AL
Sbjct: 454 VHYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLIAGDSCGD-LLTWAL 512
Query: 453 DPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEWR 512
S P S+ + ++T VE F I+ DDL+ + QY R H+ Q +F+FYS +W+
Sbjct: 513 Y-SLSSQFPISSRTVQALTEVEGFVISADDLKFVATQY--RRLHSKQLQHMFRFYSLQWQ 569
Query: 513 TSKACVIQAAWCRYKKRKLEGSLYAKENILQD--QKAEAGGKPSKFGTAIYA 562
T AC IQAAW R+ +RKL +L +E L + Q ++GG G AIYA
Sbjct: 570 TWAACFIQAAWKRHCRRKLSKALREEEGKLHNTLQNDDSGGNKLNLGAAIYA 621
Score = 110 (43.8 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 20 LQRGQ--RLASNGYNIMSTSLDNHINRIVDPRGPFWNW---IWLAVRIISTSLDPLFFYI 74
LQR + RL S G + S+ + ++ NW + LA +++ ++DPLF +I
Sbjct: 3 LQRRKFVRLDSTGVDGKLKSVRGRLKKVYGKMKTLENWRKTVLLAC-VVALAIDPLFLFI 61
Query: 75 FVVNDHKKCVDLDIKLAIIAISLRTIFDFF---NIIYS--SSTPHKHSRANAK------- 122
+++ + C D L + +RT D F +IIY + T S+A+ +
Sbjct: 62 PLIDSQRFCFTFDKTLVAVVCVIRTFIDTFYVIHIIYYLITETIAPRSQASLRGEIVVHS 121
Query: 123 ----KCFYLNSFLKDLLSCLPIPQLV 144
K L F+ D++S LPIPQ+V
Sbjct: 122 KATLKTRLLFHFIVDIISVLPIPQVV 147
>TAIR|locus:2118816 [details] [associations]
symbol:CNGC17 "cyclic nucleotide-gated channel 17"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030551 "cyclic nucleotide binding" evidence=ISS]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=ISS] InterPro:IPR003938
PRINTS:PR01463 PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005249 EMBL:AL161576
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 UniGene:At.69303 GO:GO:0030552
GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391 eggNOG:NOG291133
EMBL:AY124000 EMBL:BT002284 IPI:IPI00530862 PIR:A85355
RefSeq:NP_194765.2 UniGene:At.31840 ProteinModelPortal:Q8L7Z0
SMR:Q8L7Z0 EnsemblPlants:AT4G30360.1 GeneID:829159
KEGG:ath:AT4G30360 GeneFarm:2785 TAIR:At4g30360 InParanoid:Q8L7Z0
OMA:TARVEEW PhylomeDB:Q8L7Z0 ProtClustDB:CLSN2918232
Genevestigator:Q8L7Z0 GermOnline:AT4G30360 Uniprot:Q8L7Z0
Length = 720
Score = 558 (201.5 bits), Expect = 8.3e-68, Sum P(3) = 8.3e-68
Identities = 131/399 (32%), Positives = 192/399 (48%)
Query: 162 VFGALWYFMAIERETECWKKACREHT---ECYQNSFHC---YE----TVGNYTFLTGLCP 211
V GA WY ++++R T CWK C C C Y+ T N T + LC
Sbjct: 263 VLGAAWYILSVDRYTSCWKSRCNGEAGQVNCQLYYLDCDSMYDNNQMTWANVTKVFKLCD 322
Query: 212 TMIQDTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENX 271
+ F +G+F AI +V + F++ F YC WGLQ +S GQNL T+ GE
Sbjct: 323 ARNGE---FKYGIFGNAITKNVVSSQFFERYF-YCLWWGLQQLSSYGQNLSTTMFMGETT 378
Query: 272 XXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRN 331
QS T++LEE + K R+ E+W L + L+ RVR
Sbjct: 379 FAVLIAIFGLVLFAHLIGNMQTYLQSLTVRLEEWRLKKRDTEEWMRHRQLPEELRNRVRR 438
Query: 332 HQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLK 391
++QY W RG+D E +++ LCL+++++VP F M +L +C+ L
Sbjct: 439 YEQYKWLATRGVDEEVLLQSLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLV 498
Query: 392 PVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSA 451
L + +V+EGD I EM FI L GDF GEEL + A
Sbjct: 499 SSLCTEGTYLVREGDLISEMLFIIRGRLESSTTNGGRTGFFNSIILRPGDFCGEELLSWA 558
Query: 452 LDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEW 511
L P N+P S + ++ VEAFA+ +DL+ + Q+ R H+ + F+FYS W
Sbjct: 559 LLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVANQF--RRLHSKKLQHTFRFYSHHW 616
Query: 512 RTSKACVIQAAWCRYKKRKLEGSLYAKENILQDQKAEAG 550
RT AC IQAAW RYK+R +E +L A E+ +++++ E G
Sbjct: 617 RTWAACFIQAAWRRYKRRVMENNLTAIES-MENEEGEVG 654
Score = 108 (43.1 bits), Expect = 8.3e-68, Sum P(3) = 8.3e-68
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 23 GQRLASNGYNIMSTSLDNHINRIVDPRGPF---WNWIWLAVRIISTSLDPLFFYIFVVND 79
G RL + +S + I+DP WNW+++ +++ +DPL+F++ +
Sbjct: 49 GNRLRYTDASKSKSSKVSWYKTILDPGSEIVLKWNWVFIVSCMVALFIDPLYFFVPAIGG 108
Query: 80 HKK--CVDLDIKLAIIAISLRTIFDFFNIIY 108
K C D L+I+ RTI D F +++
Sbjct: 109 DKNYPCARTDTSLSILVTFFRTIADLFYLLH 139
Score = 53 (23.7 bits), Expect = 8.3e-68, Sum P(3) = 8.3e-68
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 126 YLNS-FLKDLLSCLPIPQLVXXXXXXXXKGSGF 157
Y+ S F+ DL++ LP+PQ+V K F
Sbjct: 174 YIKSDFIIDLIATLPLPQIVIWFVISTTKSYRF 206
>TAIR|locus:2185510 [details] [associations]
symbol:CNGC18 "AT5G14870" species:3702 "Arabidopsis
thaliana" [GO:0005216 "ion channel activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0030551 "cyclic
nucleotide binding" evidence=ISS] [GO:0005516 "calmodulin binding"
evidence=ISS] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IDA] [GO:0009860 "pollen tube growth" evidence=RCA;IMP]
[GO:0016324 "apical plasma membrane" evidence=IDA] [GO:0009827
"plant-type cell wall modification" evidence=RCA] [GO:0048610
"cellular process involved in reproduction" evidence=RCA]
[GO:0048868 "pollen tube development" evidence=RCA] PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016324 GO:GO:0009860 GO:GO:0006874
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0005216 GO:GO:0030552
GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391 eggNOG:NOG293740
EMBL:AL391149 IPI:IPI00534926 PIR:T51432 RefSeq:NP_196991.1
UniGene:At.31874 ProteinModelPortal:Q9LEQ3 SMR:Q9LEQ3 STRING:Q9LEQ3
PRIDE:Q9LEQ3 EnsemblPlants:AT5G14870.1 GeneID:831339
KEGG:ath:AT5G14870 GeneFarm:2787 TAIR:At5g14870 InParanoid:Q9LEQ3
OMA:AKTAWAG PhylomeDB:Q9LEQ3 ProtClustDB:CLSN2687259
Genevestigator:Q9LEQ3 GermOnline:AT5G14870 Uniprot:Q9LEQ3
Length = 706
Score = 546 (197.3 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 124/391 (31%), Positives = 184/391 (47%)
Query: 162 VFGALWYFMAIERETECWKKACREHT-----ECYQNSFHCYETVG-------NYTFLTGL 209
V GA+WY +I R+ CW C++ +C + C N T +
Sbjct: 227 VLGAMWYLSSIGRQFSCWSNVCKKDNALRVLDCLPSFLDCKSLEQPERQYWQNVTQVLSH 286
Query: 210 CPTMIQDTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGE 269
C TT F FGMF EA + V F K++YC WGL+ +S GQN+ TS + GE
Sbjct: 287 CDAT-SSTTNFKFGMFAEAFTT-QVATTDFVSKYLYCLWWGLRNLSSYGQNITTSVYLGE 344
Query: 270 NXXXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRV 329
QS ++++EE + K R+ E+W L LQ+RV
Sbjct: 345 TLFCITICIFGLILFTLLIGNMQSSLQSMSVRVEEWRVKRRDTEEWMRHRQLPPELQERV 404
Query: 330 RNHQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKC 389
R QY W RG+D E E++ LCL ++++VP F M +L +C C
Sbjct: 405 RRFVQYKWLATRGVDEESILHSLPTDLRREIQRHLCLSLVRRVPFFSQMDDQLLDAICGC 464
Query: 390 LKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELAT 449
L L I +EGDP+ EM F+ L GDF GEEL T
Sbjct: 465 LVSSLSTAGTYIFREGDPVNEMLFVIRGQIESSTTNGGRSGFFNSTTLRPGDFCGEELLT 524
Query: 450 SALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQ 509
AL P+ N+P S ++ +++ VEAFA++ +DL+ + +Q+ + ++ +Q F++YS
Sbjct: 525 WALMPNSTLNLPSSTRSVRALSEVEAFALSAEDLKFVAHQFKRLQSKKLQ--HAFRYYSH 582
Query: 510 EWRTSKACVIQAAWCRYKKRKLEGSLYAKEN 540
+WR AC +Q+AW RYK+RKL L E+
Sbjct: 583 QWRAWGACFVQSAWRRYKRRKLAKELSLHES 613
Score = 116 (45.9 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 43 NRIVDPRG---PFWNWIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRT 99
++I+DP +WN ++L I++ LDP +FY+ V C+ +DI LA RT
Sbjct: 38 HQILDPDSNIVTYWNHVFLITSILALFLDPFYFYVPYVGG-PACLSIDISLAATVTFFRT 96
Query: 100 IFDFFNIIYSSSTPHKHSRANAKKCF---------------YLNS-FLKDLLSCLPIPQL 143
+ D F++++ A + + F YL + FL D+ + LP+PQL
Sbjct: 97 VADIFHLLHIFMKFRTAFVARSSRVFGRGELVMDSREIAMRYLKTDFLIDVAAMLPLPQL 156
Query: 144 V 144
V
Sbjct: 157 V 157
>TAIR|locus:2046703 [details] [associations]
symbol:CNGC14 "cyclic nucleotide-gated channel 14"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030551 "cyclic nucleotide binding" evidence=ISS]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=ISS] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR003938 InterPro:IPR005821 Pfam:PF00520
PRINTS:PR01463 PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005249 EMBL:AC006954
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 EMBL:AK228122 IPI:IPI00518948
PIR:G84638 RefSeq:NP_850056.1 UniGene:At.39132
ProteinModelPortal:Q9SJA4 SMR:Q9SJA4 EnsemblPlants:AT2G24610.1
GeneID:816997 KEGG:ath:AT2G24610 GeneFarm:2782 TAIR:At2g24610
eggNOG:NOG291133 InParanoid:Q9SJA4 OMA:NTTVVFS PhylomeDB:Q9SJA4
ProtClustDB:CLSN2918083 Genevestigator:Q9SJA4 GermOnline:AT2G24610
Uniprot:Q9SJA4
Length = 726
Score = 551 (199.0 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 128/398 (32%), Positives = 190/398 (47%)
Query: 162 VFGALWYFMAIERETECWKKACREHT---ECYQNSFHC-------YETVGNYTFLTGLCP 211
+ G+ WY ++IER+ CWK C + + +C + F C N T + C
Sbjct: 262 ILGSAWYLLSIERQATCWKAECHKESVPLQCVTDFFDCGTLHRDDRNNWQNTTVVFSNCD 321
Query: 212 TMIQDTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENX 271
+ F FG+F +A+ +V F +K++YC +GLQ +S GQNL TST E
Sbjct: 322 P--SNNIQFTFGIFADALTKNVVSSP-FLEKYLYCLWFGLQNLSSYGQNLSTSTSVLETM 378
Query: 272 XXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRN 331
QS T++LEE + K R+ E+W +L Q+L++RVR
Sbjct: 379 FAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWRLKRRDTEEWMGHRLLPQNLRERVRR 438
Query: 332 HQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLK 391
QY W RG+D E +++ LCL+++++VP+F M +L +C+ L
Sbjct: 439 FVQYKWLATRGVDEETILHSLPADLRRDIQRHLCLDLVRRVPLFAQMDDQLLDAICERLA 498
Query: 392 PVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSA 451
L Q IV+EGDP+ EM FI L GDF GEEL A
Sbjct: 499 SSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSITLRPGDFCGEELLAWA 558
Query: 452 LDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEW 511
L P N+P S + ++ VEAFA+ DL+ + Q+ R H+ + F++YS +W
Sbjct: 559 LLPKSTVNLPSSTRTVRALEEVEAFALQAGDLKFVANQF--RRLHSKKLQHTFRYYSHQW 616
Query: 512 RTSKACVIQAAWCRYKKRKLEGSLYAKENILQDQKAEA 549
RT AC +Q AW RYK++KL SL E+ + EA
Sbjct: 617 RTWAACFVQVAWRRYKRKKLAKSLSLAESFSSYDEEEA 654
Score = 105 (42.0 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 31 YNIMSTSLDNHINRIVDPRGPF---WNWIWLAVRIISTSLDPLFFYIFVVN--DHKKCVD 85
+ + + + ++I+DP G WN ++L +++ +DPLFF++ V C+
Sbjct: 58 FKVFPENFEIERDKILDPGGDAVLQWNRVFLFWCLVALYVDPLFFFLSSVKRIGRSSCMT 117
Query: 86 LDIKLAIIAISLRTIFDFFNIIY 108
D+KL I+ RT+ D F +++
Sbjct: 118 TDLKLGIVITFFRTLADLFYVLH 140
Score = 84 (34.6 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 83 CVDLDIKLAIIAISLRTIFDFFNII---------YSSSTPHKHSRANAKKC------FYL 127
C+ D+KL I+ RT+ D F ++ Y S T R K YL
Sbjct: 115 CMTTDLKLGIVITFFRTLADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYL 174
Query: 128 NS-FLKDLLSCLPIPQLV 144
S F+ DL++CLP+PQ+V
Sbjct: 175 RSDFIVDLIACLPLPQIV 192
>TAIR|locus:2097860 [details] [associations]
symbol:CNGC16 "cyclic nucleotide-gated channel 16"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=ISS] InterPro:IPR005821
Pfam:PF00520 PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 EMBL:AL049658 GO:GO:0005216 GO:GO:0030552
GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391 EMBL:DQ446744
IPI:IPI00539888 PIR:T06682 RefSeq:NP_190384.1 UniGene:At.53828
ProteinModelPortal:Q9SU64 SMR:Q9SU64 EnsemblPlants:AT3G48010.1
GeneID:823956 KEGG:ath:AT3G48010 GeneFarm:2784 TAIR:At3g48010
eggNOG:NOG293740 InParanoid:Q9SU64 OMA:ICIMGLV PhylomeDB:Q9SU64
ProtClustDB:CLSN2684021 Genevestigator:Q9SU64 Uniprot:Q9SU64
Length = 705
Score = 514 (186.0 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 124/391 (31%), Positives = 184/391 (47%)
Query: 162 VFGALWYFMAIERETECWKKAC-RE----HT-ECYQNSFHC--YETVGNYTFL--TGL-- 209
V G++WY ++I+R+ ECW++ C +E H+ C C G ++ T +
Sbjct: 233 VLGSVWYVLSIQRQHECWRRECIKEMNATHSPSCSLLFLDCGSLHDPGRQAWMRITRVLS 292
Query: 210 -CPTMIQDTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEG 268
C D F FGMF +A + + F K F YC WGL+ +S GQ+L ST
Sbjct: 293 NCDARNDDDQHFQFGMFGDAFTNDVTSSPFFDKYF-YCLWWGLRNLSSYGQSLAASTLSS 351
Query: 269 ENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQR 328
E QS T +L+E + + R+ E+W L LQ+R
Sbjct: 352 ETIFSCFICVAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPDELQER 411
Query: 329 VRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCK 388
VR QY W RG+D E +++ LCL ++++VP F M +L +C+
Sbjct: 412 VRRFVQYKWLTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICE 471
Query: 389 CLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELA 448
L P L ++ +++EGDP+ EM FI L GDF GEEL
Sbjct: 472 RLVPSLNTKDTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELL 531
Query: 449 TSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYS 508
T AL P+ N+P S + +++ VEAFA+ +DL+ + Q+ R H+ + F++YS
Sbjct: 532 TWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFVANQF--RRLHSKKLQHAFRYYS 589
Query: 509 QEWRTSKACVIQAAWCRYKKRKLEGSLYAKE 539
+WR C IQAAW RY KRKL L +E
Sbjct: 590 HQWRAWGTCFIQAAWRRYMKRKLAMELARQE 620
Score = 111 (44.1 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 43 NRIVDPRGPF---WNWIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRT 99
++ +DP G WN I+L +++ LDPL+FY+ +V C+ +D++ I R
Sbjct: 42 DKTLDPGGDLITRWNHIFLITCLLALFLDPLYFYLPIVQAGTACMSIDVRFGIFVTCFRN 101
Query: 100 IFDFFNII-----YSSSTPHKHSRANAK----------KCFYLNS-FLKDLLSCLPIPQL 143
+ D +I + ++ K SR + YL S F+ DL + LP+PQ+
Sbjct: 102 LADLSFLIHILLKFKTAFVSKSSRVFGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQI 161
Query: 144 V 144
+
Sbjct: 162 M 162
>TAIR|locus:2039114 [details] [associations]
symbol:CNGC12 "cyclic nucleotide-gated channel 12"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide
binding" evidence=ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005261 "cation channel activity"
evidence=IGI;IMP] [GO:0009620 "response to fungus" evidence=IMP]
InterPro:IPR000048 InterPro:IPR005821 Pfam:PF00520 PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005261 GO:GO:0009620 EMBL:AC006526
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553
UniGene:At.36508 ProtClustDB:CLSN2681714 EMBL:AK118918
IPI:IPI00529355 IPI:IPI00547077 PIR:A84903 RefSeq:NP_850454.5
UniGene:At.50596 ProteinModelPortal:Q8GWD2 SMR:Q8GWD2 STRING:Q8GWD2
EnsemblPlants:AT2G46450.1 GeneID:819253 KEGG:ath:AT2G46450
GeneFarm:2776 TAIR:At2g46450 HOGENOM:HOG000238338 InParanoid:Q8GWD2
KO:K05391 OMA:DNENIPQ PhylomeDB:Q8GWD2 Genevestigator:Q8GWD2
GermOnline:AT2G46450 Uniprot:Q8GWD2
Length = 649
Score = 508 (183.9 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 123/392 (31%), Positives = 191/392 (48%)
Query: 162 VFGALWYFMAIERETECWKKACREHTECYQN--SFHCYETVG-NYTFLTGLCPTM----I 214
VFGA WY +IER+++CW+ AC ++C C N FL CP + I
Sbjct: 214 VFGAFWYLSSIERKSKCWRAACARTSDCNLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQI 273
Query: 215 QDTTMFNFGMFQEAIQSGMVEEKA--FKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENXX 272
++T F+FGM+ +A++SG++E K F +KF+YCF WGL+ +S GQNL+TS GE
Sbjct: 274 TNSTDFDFGMYIDALKSGVLEVKPKDFPRKFVYCFWWGLRNISALGQNLETSNSAGEIFF 333
Query: 273 XXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRNH 332
QS T +++E++ K R+ E+W ++ ++ + L++R+R
Sbjct: 334 AIIICVSGLLLFAVLIGNVQKYLQSSTTRVDEMEEKRRDTEKWMSYRVIPEYLKERIRRF 393
Query: 333 QQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKS-ILSEMCKCLK 391
+ Y W+E +G + E E K L L++LK+VP +M +L +C +K
Sbjct: 394 EDYKWRETKGTEEEALLRSLPKDLRLETKRYLYLDMLKRVPWLNIMDDGWLLEAVCDRVK 453
Query: 392 PVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSA 451
V Y+ IV+EG P+ EM + L GD GE L
Sbjct: 454 SVFYLANSFIVREGHPVEEMLIVTRGKLKSTTGSHEMGVRNNCCDLQDGDICGELLFNG- 512
Query: 452 LDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDIFKFYSQEW 511
S +P S ++++T VE F + DD++ I + +Q F+ YSQ+W
Sbjct: 513 ------SRLPTSTRTVMTLTEVEGFILLPDDIKFIASHLNVFQRQKLQRT--FRLYSQQW 564
Query: 512 RTSKACVIQAAWCRYKKRKLEGSLYAKENILQ 543
R+ A IQAAW ++ KRKL + ENI Q
Sbjct: 565 RSWAAFFIQAAWRKHCKRKLSKTR-DNENIPQ 595
Score = 104 (41.7 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 25 RLASNGYNIMSTSLDNHINRIVDPRGPFWNW---IWLAVRIISTSLDPLFFYIFVVNDHK 81
R+ S G + S+ + ++ NW + LA +++ ++DPLF +I +++ +
Sbjct: 10 RIDSMGVDGKLKSVRGRLKKVYGKMKTLENWRKTVLLAC-VVALAIDPLFLFIPLIDSQR 68
Query: 82 KCVDLDIKLAIIAISLRTIFDFF---NIIYS--SSTPHKHSRANAK-----------KCF 125
C D L + +RT D F +IIY + T S+A+ + K
Sbjct: 69 FCFTFDKTLVAVVCVIRTFIDTFYVIHIIYYLITETIAPRSQASLRGEIVVHSKATLKTR 128
Query: 126 YLNSFLKDLLSCLPIPQLV 144
L F+ D++S LPIPQ+V
Sbjct: 129 LLFHFIVDIISVLPIPQVV 147
>TAIR|locus:2162605 [details] [associations]
symbol:CNGC4 "AT5G54250" species:3702 "Arabidopsis
thaliana" [GO:0005261 "cation channel activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020 "membrane"
evidence=IDA] [GO:0030551 "cyclic nucleotide binding" evidence=ISS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0008324 "cation
transmembrane transporter activity" evidence=IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] PROSITE:PS50096 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016020 GO:GO:0009626 EMBL:AB010695 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0005216 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 EMBL:Y17912 EMBL:AY045822 EMBL:AY057691
EMBL:AY133734 IPI:IPI00534047 IPI:IPI00546492 PIR:T52574
RefSeq:NP_200236.1 RefSeq:NP_851188.1 UniGene:At.401
ProteinModelPortal:Q94AS9 SMR:Q94AS9 STRING:Q94AS9 TCDB:1.A.1.5.7
PaxDb:Q94AS9 PRIDE:Q94AS9 EnsemblPlants:AT5G54250.1
EnsemblPlants:AT5G54250.2 GeneID:835513 KEGG:ath:AT5G54250
GeneFarm:2466 TAIR:At5g54250 eggNOG:NOG326427 InParanoid:Q94AS9
OMA:YGAYQWT PhylomeDB:Q94AS9 ProtClustDB:CLSN2686736
Genevestigator:Q94AS9 GermOnline:AT5G54250 GO:GO:0008324
Uniprot:Q94AS9
Length = 694
Score = 364 (133.2 bits), Expect = 7.1e-39, Sum P(3) = 7.1e-39
Identities = 101/386 (26%), Positives = 170/386 (44%)
Query: 157 FFPAMVFGALWYFMAIERETECWKKACREHTECYQNSFHCYETVGNYTFLTGL------- 209
F A GA WY + ++R +C K+ C C C E V T + L
Sbjct: 269 FVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPVYYGTTVMVLDRARLAW 328
Query: 210 -----CPTMIQD-TTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQT 263
++ D T + +G +Q IQ +V ++ +K ++ WGL T+S G NL++
Sbjct: 329 AQNHQARSVCLDINTNYTYGAYQWTIQ--LVSSESRLEKILFPIFWGLMTLSTFG-NLES 385
Query: 264 STHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQ 323
+T E + T K + + K R IE W L
Sbjct: 386 TTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLKMRNIEWWMKKRHLPI 445
Query: 324 SLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSIL 383
+QRVRN+++ W MRG+D ++K LCL+++++VP+FQ M +L
Sbjct: 446 GFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVL 505
Query: 384 SEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFW 443
+C +K +++ + I KEGD + M F+ S L G+F
Sbjct: 506 ENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDGVKSCCM--LGPGNFS 563
Query: 444 GEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQPLDI 503
G+EL + L + +P S+ L+++ EAF ++ +D++ + Q++++ N +
Sbjct: 564 GDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVT-QHFRYTFVNEKVKRS 622
Query: 504 FKFYSQEWRTSKACVIQAAWCRYKKR 529
++YS WRT A +Q AW RYK R
Sbjct: 623 ARYYSPGWRTWAAVAVQLAWRRYKHR 648
Score = 100 (40.3 bits), Expect = 7.1e-39, Sum P(3) = 7.1e-39
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 42 INRIVDPRGPF---WNWIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLR 98
+ RI+DPR + WN ++L V +DPLF Y V+D C+ +D LA+ +LR
Sbjct: 76 LGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMCLLVDGWLALTVTALR 135
Query: 99 TIFDFFNI 106
++ D ++
Sbjct: 136 SMTDLLHL 143
Score = 46 (21.3 bits), Expect = 7.1e-39, Sum P(3) = 7.1e-39
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 128 NSFLKDLLSCLPIPQLV 144
N F DL LP+PQ+V
Sbjct: 187 NGFFFDLFVILPLPQVV 203
>TAIR|locus:2180867 [details] [associations]
symbol:DND1 "AT5G15410" species:3702 "Arabidopsis
thaliana" [GO:0005261 "cation channel activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0030551 "cyclic
nucleotide binding" evidence=ISS] [GO:0005242 "inward rectifier
potassium channel activity" evidence=IGI] [GO:0005221
"intracellular cyclic nucleotide activated cation channel activity"
evidence=IMP] [GO:0006952 "defense response" evidence=TAS]
[GO:0009626 "plant-type hypersensitive response" evidence=IMP]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0005222
"intracellular cAMP activated cation channel activity"
evidence=IDA] [GO:0005262 "calcium channel activity" evidence=IMP]
[GO:0007263 "nitric oxide mediated signal transduction"
evidence=IMP] PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0005516
GO:GO:0009626 GO:GO:0007263 GO:GO:0005242 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 EMBL:AL391143 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 GO:GO:0005222 EMBL:Y16328
EMBL:AF067798 EMBL:AF280939 IPI:IPI00517917 PIR:T51519
RefSeq:NP_197045.1 UniGene:At.20813 UniGene:At.74751
ProteinModelPortal:O65718 SMR:O65718 STRING:O65718 TCDB:1.A.1.5.6
EnsemblPlants:AT5G15410.1 GeneID:831393 KEGG:ath:AT5G15410
GeneFarm:2464 TAIR:At5g15410 eggNOG:NOG261665 InParanoid:O65718
OMA:SKRVQRW PhylomeDB:O65718 ProtClustDB:CLSN2687460
Genevestigator:O65718 Uniprot:O65718
Length = 726
Score = 340 (124.7 bits), Expect = 3.7e-32, Sum P(3) = 3.7e-32
Identities = 97/389 (24%), Positives = 169/389 (43%)
Query: 157 FFPAMVFGALWYFMAIERETECWKKACREHTECYQN----SFHCYE------TVGNYTFL 206
F + V G WY +AI+R C ++ C C + CY+ TVG Y L
Sbjct: 301 FIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCNLSLACKEEVCYQFVSPTSTVG-YPCL 359
Query: 207 TGLC------PTMIQDTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQN 260
+G P + F +G+++ A+ ++ + K +Y WGL T+S +
Sbjct: 360 SGNLTSVVNKPMCLDSNGPFRYGIYRWALP--VISSNSLAVKILYPIFWGLMTLSTFAND 417
Query: 261 LQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEM 320
L+ +++ E + K +++ + R++E W
Sbjct: 418 LEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQIRCRDMEWWMKRRQ 477
Query: 321 LSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGK 380
L L+QRVR ++ W + G D ++K LC +++ KVP+F+ M
Sbjct: 478 LPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDIKRYLCFDLINKVPLFRGMDD 537
Query: 381 SILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTG 440
IL +C KP ++ ++ I++EGDP+ M FI + L G
Sbjct: 538 LILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVKRIQSLSKGVLAT--STLEPG 595
Query: 441 DFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINTDDLRAIVYQYWQHRNHNMQP 500
+ G+EL + L L +P S+ + + N+EAF++ ++DLR I +++++ N +
Sbjct: 596 GYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSEDLRYIT-DHFRYKFANERL 654
Query: 501 LDIFKFYSQEWRTSKACVIQAAWCRYKKR 529
++YS WRT A IQ AW R +KR
Sbjct: 655 KRTARYYSSNWRTWAAVNIQMAWRRRRKR 683
Score = 76 (31.8 bits), Expect = 3.7e-32, Sum P(3) = 3.7e-32
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 38 LDNHINRIVDPRGPF---WNWIWLAVRIISTSLDPLFFYIFVVN--DHKKCVDLDIKLAI 92
L ++DPR WN L R ++ ++DPLFFY + C+ +D A
Sbjct: 106 LKGPFGEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAA 165
Query: 93 IAISLRTIFD 102
+ LRT D
Sbjct: 166 VVTVLRTCLD 175
Score = 40 (19.1 bits), Expect = 3.7e-32, Sum P(3) = 3.7e-32
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 127 LNSFLKDLLSCLPIPQLV 144
L F D++ LP+PQ V
Sbjct: 218 LTGFWFDVIVILPVPQAV 235
>TAIR|locus:2090562 [details] [associations]
symbol:CNGC19 "cyclic nucleotide gated channel 19"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0006811 "ion transport"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016020
"membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=ISS] InterPro:IPR005821
Pfam:PF00520 PROSITE:PS50096 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AB022219 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0005216 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 EMBL:AF148542 IPI:IPI00534688
RefSeq:NP_188396.2 UniGene:At.47913 ProteinModelPortal:Q9LDR2
SMR:Q9LDR2 STRING:Q9LDR2 PaxDb:Q9LDR2 PRIDE:Q9LDR2
EnsemblPlants:AT3G17690.1 GeneID:821036 KEGG:ath:AT3G17690
GeneFarm:2788 TAIR:At3g17690 eggNOG:NOG243723 InParanoid:Q9LDR2
OMA:DRRRMEM PhylomeDB:Q9LDR2 ProtClustDB:CLSN2688496
Genevestigator:Q9LDR2 GermOnline:AT3G17690 Uniprot:Q9LDR2
Length = 729
Score = 296 (109.3 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 100/386 (25%), Positives = 167/386 (43%)
Query: 164 GALWYFMAIERETECWKKACREHTECYQNSFHCYETVGNYTFLT--------GLCPTMIQ 215
G+ WY A++R +C A + +N C G+Y + Q
Sbjct: 348 GSCWYLSALQRVKKCMLNAWNISADERRNLIDCAR--GSYASKSQRDLWRDNASVNACFQ 405
Query: 216 DTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXX 275
+ + +G++ +A+ + E +F +F Y WG Q +S NL S GE
Sbjct: 406 ENG-YTYGIYLKAVN--LTNESSFFTRFSYSLYWGFQQISTLAGNLSPSYSVGEVFFTMG 462
Query: 276 XXXXXXXXXXXXXXXXXXXXQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQY 335
QS + E+ + R++EQW + L + +++RVR ++Y
Sbjct: 463 IIGLGLLLFARLIGNMHNFLQSLDRRRMEMMLRKRDVEQWMSHRRLPEDIRKRVREVERY 522
Query: 336 VWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLY 395
W RG++ E +++ L + LKKV +F +M +S+L + + LK Y
Sbjct: 523 TWAATRGVNEELLFENMPDDLQRDIRRHL-FKFLKKVRIFSLMDESVLDSIRERLKQRTY 581
Query: 396 VQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELAT---SAL 452
++ ++ + +M FI SV LS GD GEEL T S++
Sbjct: 582 IRSSTVLHHRGLVEKMVFIVRGEMESIGEDG----SVLP--LSEGDVCGEELLTWCLSSI 635
Query: 453 DPDPLS-NIPH----SNCALISVTNVEAFAINTDDLRAIVYQYWQH-RNHNMQPLDIFKF 506
+PD +P SN + VTNVEAF+++ DL + + + R+H +Q ++
Sbjct: 636 NPDGTRIKMPPKGLVSNRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVQ--GAIRY 693
Query: 507 YSQEWRTSKACVIQAAWCRYKKRKLE 532
S WR A IQ AW RY+KR+L+
Sbjct: 694 ESPYWRLRAAMQIQVAW-RYRKRQLQ 718
Score = 105 (42.0 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 45 IVDPRGPF---WNWIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRTIF 101
I++P F W + +++ +DPLFF++ ++ KC+ +D + + +SLR+I
Sbjct: 158 IMNPHSKFVQVWTRVLAFSSLVAIFIDPLFFFLLLIQQDNKCIAIDWRATKVLVSLRSIT 217
Query: 102 D---FFNIIYSSSTPH--KHSRA--------NAKKC---FYLNSFLKDLLSCLPIPQLV 144
D F NI+ + SR + +K ++ FL D+ PIPQ++
Sbjct: 218 DLIFFINILLQFRLAYVAPESRIVGAGQLVDHPRKIARHYFRGKFLLDMFIVFPIPQIM 276
>TAIR|locus:2090572 [details] [associations]
symbol:CNBT1 "cyclic nucleotide-binding transporter 1"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0030551
"cyclic nucleotide binding" evidence=ISS] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0009624 "response to nematode"
evidence=IEP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0009595
"detection of biotic stimulus" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043900
"regulation of multi-organism process" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR005821
Pfam:PF00520 PROSITE:PS50096 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009624 EMBL:AB022219
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0009535 GO:GO:0005216
GO:GO:0030552 GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391
EMBL:AF148542 ProtClustDB:CLSN2688496 EMBL:AF148541 IPI:IPI00542766
RefSeq:NP_566585.1 UniGene:At.6293 ProteinModelPortal:Q9LD37
SMR:Q9LD37 STRING:Q9LD37 EnsemblPlants:AT3G17700.1 GeneID:821037
KEGG:ath:AT3G17700 GeneFarm:2471 TAIR:At3g17700 eggNOG:NOG245622
InParanoid:Q9LD37 OMA:QCLRNAC PhylomeDB:Q9LD37
Genevestigator:Q9LD37 GermOnline:AT3G17700 Uniprot:Q9LD37
Length = 764
Score = 259 (96.2 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 100/391 (25%), Positives = 164/391 (41%)
Query: 162 VFGALWYFMAIERETECWKKACREH-TECYQNSFHCYETVGNYTFLT-------GLCPTM 213
V G+ WY ++R +C + AC EC Q+ C GN + L
Sbjct: 380 VVGSCWYLFGLQRVNQCLRNACGNFGREC-QDLIDCGN--GNSSVLVRATWKDNASANAC 436
Query: 214 IQDTTMFNFGMFQEAIQSGMVEEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXX 273
Q+ F +G++ +A+ + ++ Y WG Q +S N S GE
Sbjct: 437 FQEDG-FPYGIYLKAVN--LTNHSNLFTRYSYSLFWGFQQISTLAGNQVPSYFLGEVFFT 493
Query: 274 XXXXXXXXXXXXXXXXXXXXXXQS-GTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRNH 332
Q+ G LE + + R++EQW + L +++RVR
Sbjct: 494 MGIIGLGLLLFALLIGNMQNFLQALGKRNLE-MTLRRRDVEQWMSHRRLPDGIRRRVREA 552
Query: 333 QQYVWQEMRGIDVEXXXXXXXXXXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLKP 392
+++ W RG++ E +++ L + LKKV +F +M + IL + + LK
Sbjct: 553 ERFNWAATRGVNEELLFENMPDDLQRDIRRHL-FKFLKKVRIFSLMDEPILDAIRERLKQ 611
Query: 393 VLYVQECCIVKEGDPICEMFFIXXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELAT--- 449
Y+ ++ G + +M FI SV Y GD GEEL T
Sbjct: 612 RTYIGSSTVLHRGGLVEKMVFIVRGEMESIGEDG----SVLPLY--EGDVCGEELLTWCL 665
Query: 450 --SALDPDPLSNIPHSNCALIS------VTNVEAFAINTDDLRAIVYQYWQH-RNHNMQP 500
S+++PD + I + L+S VTNVEAF+++ DL + + + R+H +Q
Sbjct: 666 ERSSVNPDG-TRIRMPSKGLLSSRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVQ- 723
Query: 501 LDIFKFYSQEWRTSKACVIQAAWCRYKKRKL 531
++ S WR A IQ AW RY++R+L
Sbjct: 724 -GAIRYDSPYWRLRAARQIQVAW-RYRRRRL 752
Score = 84 (34.6 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 29/129 (22%), Positives = 62/129 (48%)
Query: 35 STSLDNHINRIVDPRGP---FWNWIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLA 91
++S++ ++ I++P W + +++ +DPLFF++ V + KC+ +D +
Sbjct: 182 ASSVNRYLPGIMNPHAKEVQTWTKFFALSCLLAIFIDPLFFFLIKVQEQNKCIMIDWPMT 241
Query: 92 IIAISLRTIFDF---------FNIIYSS--STPHKHSR--ANAKKC--FYLNS-FLKDLL 135
+++R++ D F + Y + ST + ++ KK YL F DL
Sbjct: 242 KAFVAVRSVTDVIFTMNILLQFRLAYVARESTVVGAGQLVSHPKKIALHYLKGKFFLDLF 301
Query: 136 SCLPIPQLV 144
+P+PQ++
Sbjct: 302 IVMPLPQIL 310
>ZFIN|ZDB-GENE-090312-121 [details] [associations]
symbol:cnga3b "cyclic nucleotide gated channel
alpha 3b" species:7955 "Danio rerio" [GO:0006811 "ion transport"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 Pfam:PF00027 INTERPRO:IPR000595
ZFIN:ZDB-GENE-090312-121 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0016021 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042 GO:GO:0005216
InterPro:IPR018488 KO:K04950 GeneTree:ENSGT00550000074376
EMBL:CU468726 IPI:IPI00503936 RefSeq:XP_002660423.1
Ensembl:ENSDART00000027050 GeneID:100334711 KEGG:dre:100334711
Uniprot:E7F485
Length = 718
Score = 141 (54.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 56/250 (22%), Positives = 96/250 (38%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+K+IYC W T++ G+ + E +
Sbjct: 381 RKYIYCLYWSTLTLTTIGET-PPPVRDIEYFFVVSDFLIGVLIFATIVGNVGAMISNMNA 439
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K I+Q+ F +S+ L+ RV Y+W E + D + E+
Sbjct: 440 SRAEFQAKIDSIKQYMQFRKVSKDLEARVVKWFDYLWTEQKTCDEKEVLKYLPDKLKAEI 499
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ LE L+KV +FQ +L E+ L+P ++ I K+GD EM+ I
Sbjct: 500 AINVHLETLRKVRIFQDCEAGLLVELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLA 559
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
V LS G ++GE ++ + N +N + SV + FA++
Sbjct: 560 VVADDGVTQFVV----LSDGAYFGE-ISILGIKGSKAGNRRTAN--IRSVGYSDLFALSK 612
Query: 481 DDLRAIVYQY 490
DDL + +Y
Sbjct: 613 DDLMDALSEY 622
>ZFIN|ZDB-GENE-090611-2 [details] [associations]
symbol:cnga3a "cyclic nucleotide gated channel alpha
3a" species:7955 "Danio rerio" [GO:0006811 "ion transport"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 Pfam:PF00027 INTERPRO:IPR000595 ZFIN:ZDB-GENE-090611-2
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0005216 InterPro:IPR018488
GeneTree:ENSGT00550000074376 EMBL:CR388007 IPI:IPI01023472
Ensembl:ENSDART00000149833 Bgee:F8W5H0 Uniprot:F8W5H0
Length = 706
Score = 138 (53.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 56/250 (22%), Positives = 96/250 (38%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+K+IYC W T++ G+ + E +
Sbjct: 364 RKYIYCLYWSTLTLTTIGET-PPPVRDIEYLFVVMDFLIGVLIFATIVGNVGAMISNMNA 422
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K I+Q+ F +S+ L+ RV Y+W E + D + E+
Sbjct: 423 SRAEFQAKIDSIKQYMQFRKVSKDLEARVIKWFDYLWTEKKTCDEKEVLKNLPDKLKAEI 482
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ L+ LKKV +FQ +L E+ L+P ++ I K+GD EM+ I
Sbjct: 483 AINVHLDTLKKVRIFQDCEAGLLIELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLA 542
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
V LS G ++GE ++ + N +N + SV + FA++
Sbjct: 543 VVADDGITQFVV----LSDGAYFGE-ISILGIKGSKAGNRRTAN--IRSVGYSDLFALSK 595
Query: 481 DDLRAIVYQY 490
DDL + +Y
Sbjct: 596 DDLVEALTEY 605
Score = 45 (20.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 507 YSQEWRTSKACVIQAAWCRYK--KRKLE--G-SLYAKENILQDQKAEAGGKPSKFGTAIY 561
YS + SK +++A Y K+ LE G ++ K+N+L + A AG P I+
Sbjct: 587 YSDLFALSKDDLVEAL-TEYPDAKKALEEKGKAILRKDNLLDEAVAAAGADPKDLEEKIH 645
>RGD|70948 [details] [associations]
symbol:Cnga3 "cyclic nucleotide gated channel alpha 3"
species:10116 "Rattus norvegicus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=NAS] [GO:0005221 "intracellular cyclic nucleotide activated
cation channel activity" evidence=ISO] [GO:0005223 "intracellular
cGMP activated cation channel activity" evidence=NAS;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006812 "cation transport" evidence=ISO]
[GO:0017071 "intracellular cyclic nucleotide activated cation
channel complex" evidence=IC] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030553 "cGMP binding" evidence=NAS;IDA] [GO:0031960 "response
to corticosteroid stimulus" evidence=IEP] [GO:0032026 "response to
magnesium ion" evidence=IDA] [GO:0034220 "ion transmembrane
transport" evidence=ISO;IDA] [GO:0042622 "photoreceptor outer
segment membrane" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA] [GO:0046549
"retinal cone cell development" evidence=ISO] [GO:0051591 "response
to cAMP" evidence=IDA] Pfam:PF00027 RGD:70948 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0004871
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0051591 GO:GO:0005223
GO:GO:0001750 GO:GO:0032026 InterPro:IPR018488 GO:GO:0030553
HSSP:O88703 GO:GO:0031960 IPI:IPI00190422 EMBL:AF031943
UniGene:Rn.10886 ProteinModelPortal:Q9QX26 STRING:Q9QX26
UCSC:RGD:70948 Genevestigator:Q9QX26 Uniprot:Q9QX26
Length = 252
Score = 125 (49.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 52/250 (20%), Positives = 94/250 (37%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+K+IY W T++ G+ E E +
Sbjct: 9 RKYIYSLYWSTLTLTTIGETPPPVKDE-EYLFVVIDFLVGVLIFATIVGNVGSMISNMNA 67
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K I+Q+ F +++ L+ RV Y+W + +D + E+
Sbjct: 68 SRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANRKTVDEKEVLKNLPDKLKAEI 127
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ L+ LKKV +FQ +L E+ L+P ++ I K+GD EM+ I
Sbjct: 128 AINVHLDTLKKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKLA 187
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
V LS G ++GE ++ + N +N I +++ F ++
Sbjct: 188 VVADDGVTQFVV----LSDGSYFGE-ISILNIKGSKSGNRRTANIRSIGYSDL--FCLSK 240
Query: 481 DDLRAIVYQY 490
DDL + +Y
Sbjct: 241 DDLMETLTEY 250
>UNIPROTKB|F1LR88 [details] [associations]
symbol:Cnga3 "Protein Cnga3" species:10116 "Rattus
norvegicus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 Pfam:PF00027 RGD:70948 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0001750 GO:GO:0046549
InterPro:IPR018488 GO:GO:0005221 GeneTree:ENSGT00550000074376
IPI:IPI00190422 Ensembl:ENSRNOT00000059706 ArrayExpress:F1LR88
Uniprot:F1LR88
Length = 611
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 52/250 (20%), Positives = 94/250 (37%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+K+IY W T++ G+ E E +
Sbjct: 271 RKYIYSLYWSTLTLTTIGETPPPVKDE-EYLFVVIDFLVGVLIFATIVGNVGSMISNMNA 329
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K I+Q+ F +++ L+ RV Y+W + +D + E+
Sbjct: 330 SRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANRKTVDEKEVLKNLPDKLKAEI 389
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ L+ LKKV +FQ +L E+ L+P ++ I K+GD EM+ I
Sbjct: 390 AINVHLDTLKKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKLA 449
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
V LS G ++GE ++ + N +N I +++ F ++
Sbjct: 450 VVADDGVTQFVV----LSDGSYFGE-ISILNIKGSKSGNRRTANIRSIGYSDL--FCLSK 502
Query: 481 DDLRAIVYQY 490
DDL + +Y
Sbjct: 503 DDLMETLTEY 512
>UNIPROTKB|F1NAI9 [details] [associations]
symbol:CNGA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005249 "voltage-gated potassium channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007608 "sensory perception of smell" evidence=IEA]
InterPro:IPR003938 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01463
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005249 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 InterPro:IPR018488 GeneTree:ENSGT00550000074376
OMA:HYMHFRK EMBL:AADN02013491 IPI:IPI00581587
Ensembl:ENSGALT00000011797 Uniprot:F1NAI9
Length = 609
Score = 120 (47.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 45/250 (18%), Positives = 95/250 (38%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
++++YC W T++ G+ + E +
Sbjct: 268 REYVYCLYWSTLTLTTIGET-PPPVRDEEYLFVIFDFLIGVLIFATIVGNVGSMISNMNA 326
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K I+ + F +S+ ++ +V Y+W + +D E+
Sbjct: 327 TRAEFQAKIDAIKHYMQFRKVSKDMETKVIKWFDYLWTNKKAVDEREVLKSLPDKLRAEI 386
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ LE LKKV +FQ +L E+ L+P ++ I ++GD EM+ I
Sbjct: 387 AINVHLETLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLA 446
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
++ L+ G +GE ++ + + N +N + +++ F ++
Sbjct: 447 VVADDGTTQYAL----LTAGGCFGE-ISILNIKGSKMGNRRTANIRSLGYSDL--FCLSK 499
Query: 481 DDLRAIVYQY 490
+DL +V +Y
Sbjct: 500 EDLMEVVTEY 509
Score = 50 (22.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 25/88 (28%), Positives = 36/88 (40%)
Query: 53 WNWIWLAVRIISTSLDPLFFYIFVVNDH-KKCVDLDIKLAIIAISLRTIFDFFNIIYSSS 111
+NW L R + L + +++V D+ C I + I I LRT F ++
Sbjct: 99 YNWCLLVARACFSDLQKTYVVLWLVLDYISDC----IYIGDIVIRLRTGFLEQGLLVKDL 154
Query: 112 TPHKHSRANAKKCFYLNSFLKDLLSCLP 139
K R N Y F D+LS LP
Sbjct: 155 ---KKLRDNY---IYTLQFKLDVLSILP 176
>UNIPROTKB|F1NEW7 [details] [associations]
symbol:CNGA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0005221
"intracellular cyclic nucleotide activated cation channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0046549 "retinal cone cell development" evidence=IEA]
InterPro:IPR005821 Pfam:PF00520 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0001750 InterPro:IPR018488
IPI:IPI00589515 GO:GO:0005221 GeneTree:ENSGT00550000074376
OMA:MAKINTQ EMBL:AADN02017681 Ensembl:ENSGALT00000027043
Uniprot:F1NEW7
Length = 731
Score = 128 (50.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 53/250 (21%), Positives = 94/250 (37%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+K+IY W T++ G+ E E +
Sbjct: 388 RKYIYSLYWSTLTLTTIGETPPPVKDE-EYLFVVIDFLVGVLIFATIVGNVGSMISNMNA 446
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K I+Q+ F +++ L+ RV Y+W + +D + E+
Sbjct: 447 SRAEFQAKVDSIKQYMHFRKVTKDLEARVIKWFDYLWTNKKTVDEKEVLKNLPDKLKAEI 506
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ L+ LKKV +FQ +L E+ LKP ++ I K+GD EM+ I
Sbjct: 507 AINVHLDTLKKVRIFQDCEAGLLIELVLKLKPTVFSPGDYICKKGDIGREMYIIKEGKLA 566
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
V LS G ++GE ++ + N +N I +++ F ++
Sbjct: 567 VVADDGITQFVV----LSDGSYFGE-ISILNIKGSKSGNRRTANIRSIGYSDL--FCLSK 619
Query: 481 DDLRAIVYQY 490
DDL + +Y
Sbjct: 620 DDLMEALTEY 629
Score = 43 (20.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 507 YSQEWRTSKACVIQAAWCRYK--KRKLE--G-SLYAKENILQDQKAEAGGKP 553
YS + SK +++A Y K+ LE G + K+N++ ++ A+AG P
Sbjct: 611 YSDLFCLSKDDLMEAL-TEYPEAKKALEEKGRQILMKDNLIDEEAAKAGADP 661
>UNIPROTKB|Q90805 [details] [associations]
symbol:Q90805 "Cyclic nucleotide-gated channel cone
photoreceptor subunit alpha" species:9031 "Gallus gallus"
[GO:0007601 "visual perception" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030552 "cAMP binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0001750
"photoreceptor outer segment" evidence=IEA] [GO:0005221
"intracellular cyclic nucleotide activated cation channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0046549 "retinal cone cell development" evidence=IEA]
InterPro:IPR005821 Pfam:PF00520 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
GO:GO:0007601 GO:GO:0050896 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042
GO:GO:0001750 GO:GO:0030552 InterPro:IPR018488 EMBL:X89598
IPI:IPI00589515 PIR:I50630 RefSeq:NP_990552.1 UniGene:Gga.672
ProteinModelPortal:Q90805 GeneID:396144 KEGG:gga:396144 CTD:1261
eggNOG:NOG300025 HOGENOM:HOG000007898 HOVERGEN:HBG000281
InParanoid:Q90805 KO:K04950 OrthoDB:EOG4N5VWD NextBio:20816201
GO:GO:0005221 Uniprot:Q90805
Length = 735
Score = 128 (50.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 53/250 (21%), Positives = 94/250 (37%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+K+IY W T++ G+ E E +
Sbjct: 392 RKYIYSLYWSTLTLTTIGETPPPVKDE-EYLFVVIDFLVGVLIFATIVGNVGSMISNMNA 450
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K I+Q+ F +++ L+ RV Y+W + +D + E+
Sbjct: 451 SRAEFQAKVDSIKQYMHFRKVTKDLEARVIKWFDYLWTNKKTVDEKEVLKNLPDKLKAEI 510
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ L+ LKKV +FQ +L E+ LKP ++ I K+GD EM+ I
Sbjct: 511 AINVHLDTLKKVRIFQDCEAGLLIELVLKLKPTVFSPGDYICKKGDIGREMYIIKEGKLA 570
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
V LS G ++GE ++ + N +N I +++ F ++
Sbjct: 571 VVADDGITQFVV----LSDGSYFGE-ISILNIKGSKSGNRRTANIRSIGYSDL--FCLSK 623
Query: 481 DDLRAIVYQY 490
DDL + +Y
Sbjct: 624 DDLMEALTEY 633
Score = 43 (20.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 507 YSQEWRTSKACVIQAAWCRYK--KRKLE--G-SLYAKENILQDQKAEAGGKP 553
YS + SK +++A Y K+ LE G + K+N++ ++ A+AG P
Sbjct: 615 YSDLFCLSKDDLMEAL-TEYPEAKKALEEKGRQILMKDNLIDEEAAKAGADP 665
>UNIPROTKB|Q90980 [details] [associations]
symbol:Q90980 "Cyclic nucleotide-gated channel rod
photoreceptor subunit alpha" species:9031 "Gallus gallus"
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030552 "cAMP binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA]
InterPro:IPR005821 Pfam:PF00520 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0007601
GO:GO:0050896 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042 GO:GO:0005216
GO:GO:0030552 GO:GO:0042622 InterPro:IPR018488 eggNOG:NOG300025
HOGENOM:HOG000007898 HOVERGEN:HBG000281 EMBL:X89599 IPI:IPI00586855
PIR:I50680 RefSeq:NP_990551.1 UniGene:Gga.671
ProteinModelPortal:Q90980 STRING:Q90980 Ensembl:ENSGALT00000022870
GeneID:396143 KEGG:gga:396143 CTD:1259 GeneTree:ENSGT00550000074376
InParanoid:Q90980 KO:K04948 OMA:WTMVIAR OrthoDB:EOG4NZTST
NextBio:20816200 Uniprot:Q90980
Length = 645
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 50/250 (20%), Positives = 93/250 (37%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+K++Y W T++ G+ + E +
Sbjct: 299 RKYVYSLYWSTLTLTTIGET-PPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNMNA 357
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K I+Q+ F +S+ +++RV Y+W + +D E+
Sbjct: 358 ARAEFQAKIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEI 417
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ LE LKKV +F +L E+ L+P +Y I ++GD EM+ I
Sbjct: 418 AINVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLA 477
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
V LS G ++GE ++ + N +N I +++ F ++
Sbjct: 478 VVADDGVTQFVV----LSDGSYFGE-ISILNIKGSKAGNRRTANIRSIGYSDL--FCLSK 530
Query: 481 DDLRAIVYQY 490
DDL + +Y
Sbjct: 531 DDLMEALTEY 540
>UNIPROTKB|I3LSH4 [details] [associations]
symbol:LOC100739165 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042
GO:GO:0005216 InterPro:IPR018488 GeneTree:ENSGT00550000074376
EMBL:CU972426 Ensembl:ENSSSCT00000026243 OMA:NCNNTDN Uniprot:I3LSH4
Length = 485
Score = 123 (48.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 51/250 (20%), Positives = 94/250 (37%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+K+IY W T++ G+ E E +
Sbjct: 126 RKYIYSLYWSTLTLTTIGETPPPVKDE-EYLFVVIDFLVGVLIFATIVGNVGSMISNMNA 184
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K I+Q+ F +++ L+ RV Y+W + +D + E+
Sbjct: 185 SRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEI 244
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ L+ L+KV +FQ +L E+ L+P ++ I K+GD EM+ I
Sbjct: 245 AINVHLDTLRKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKLA 304
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
V LS G ++GE ++ + N +N I +++ F ++
Sbjct: 305 VVAEDGITQFVV----LSDGSYFGE-ISILNIKGSKSGNRRTANIRSIGYSDL--FCLSK 357
Query: 481 DDLRAIVYQY 490
DDL + +Y
Sbjct: 358 DDLMEALTEY 367
Score = 42 (19.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 507 YSQEWRTSKACVIQAAWCRYK--KRKLE--G-SLYAKENILQDQKAEAGGKP 553
YS + SK +++A Y K+ LE G + K+N++ ++ A+AG P
Sbjct: 349 YSDLFCLSKDDLMEAL-TEYPEAKKALEEKGRQILMKDNLIDEELAKAGADP 399
>UNIPROTKB|Q16281 [details] [associations]
symbol:CNGA3 "Cyclic nucleotide-gated cation channel
alpha-3" species:9606 "Homo sapiens" [GO:0007601 "visual
perception" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030553 "cGMP binding" evidence=IEA] [GO:0001750
"photoreceptor outer segment" evidence=IEA] [GO:0005221
"intracellular cyclic nucleotide activated cation channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0046549 "retinal cone cell development" evidence=IEA]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0015276 "ligand-gated ion channel
activity" evidence=TAS] InterPro:IPR005821 Pfam:PF00520
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 GO:GO:0007165
GO:GO:0007601 GO:GO:0015276 Orphanet:65 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 Pathway_Interaction_DB:cone_pathway GO:GO:0001750
GO:GO:0046549 InterPro:IPR018488 GO:GO:0030553 CTD:1261
eggNOG:NOG300025 HOGENOM:HOG000007898 HOVERGEN:HBG000281 KO:K04950
GO:GO:0005221 EMBL:AF065314 EMBL:AC092675 EMBL:BC096298
EMBL:BC096299 EMBL:BC096300 EMBL:S76069 IPI:IPI00000812
IPI:IPI00816511 PIR:I78560 PIR:S74179 RefSeq:NP_001073347.1
RefSeq:NP_001289.1 UniGene:Hs.234785 PDB:3SWY PDBsum:3SWY
ProteinModelPortal:Q16281 SMR:Q16281 IntAct:Q16281 STRING:Q16281
PhosphoSite:Q16281 DMDM:13959682 PaxDb:Q16281 PRIDE:Q16281
Ensembl:ENST00000272602 Ensembl:ENST00000393504
Ensembl:ENST00000436404 GeneID:1261 KEGG:hsa:1261 UCSC:uc002syt.3
GeneCards:GC02P098962 HGNC:HGNC:2150 MIM:216900 MIM:600053
neXtProt:NX_Q16281 Orphanet:49382 PharmGKB:PA26660 PhylomeDB:Q16281
ChEMBL:CHEMBL1628463 GenomeRNAi:1261 NextBio:5101
ArrayExpress:Q16281 Bgee:Q16281 CleanEx:HS_CNGA3
Genevestigator:Q16281 GermOnline:ENSG00000144191 Uniprot:Q16281
Length = 694
Score = 128 (50.1 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 53/256 (20%), Positives = 95/256 (37%)
Query: 235 EEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXX 294
E +K+IY W T++ G+ E E
Sbjct: 344 EHGRLSRKYIYSLYWSTLTLTTIGETPPPVKDE-EYLFVVVDFLVGVLIFATIVGNVGSM 402
Query: 295 XQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXX 354
+ E ++K I+Q+ F +++ L+ RV Y+W + +D +
Sbjct: 403 ISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPD 462
Query: 355 XXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFI 414
E+ + L+ LKKV +FQ +L E+ L+P ++ I K+GD EM+ I
Sbjct: 463 KLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYII 522
Query: 415 XXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVE 474
V LS G ++GE ++ + N +N I +++
Sbjct: 523 NEGKLAVVADDGVTQFVV----LSDGSYFGE-ISILNIKGSKSGNRRTANIRSIGYSDL- 576
Query: 475 AFAINTDDLRAIVYQY 490
F ++ DDL + +Y
Sbjct: 577 -FCLSKDDLMEALTEY 591
Score = 41 (19.5 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 507 YSQEWRTSKACVIQAAWCRYK--KRKLE--G-SLYAKENILQDQKAEAGGKP 553
YS + SK +++A Y K+ LE G + K+N++ ++ A AG P
Sbjct: 573 YSDLFCLSKDDLMEAL-TEYPEAKKALEEKGRQILMKDNLIDEELARAGADP 623
Score = 39 (18.8 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 52 FWNWIWLAVRIISTSLDPLFFYIFVVNDH 80
F+NW L R L + +++V D+
Sbjct: 180 FYNWYLLICRACFDELQSEYLMLWLVLDY 208
>UNIPROTKB|E9PF93 [details] [associations]
symbol:CNGA3 "Cyclic nucleotide-gated cation channel
alpha-3" species:9606 "Homo sapiens" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR005821 Pfam:PF00520 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0016021 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042 GO:GO:0005216
InterPro:IPR018488 OMA:MAKINTQ EMBL:AC092675 HGNC:HGNC:2150
IPI:IPI00442261 ProteinModelPortal:E9PF93 SMR:E9PF93
Ensembl:ENST00000409937 UCSC:uc010fij.3 ArrayExpress:E9PF93
Bgee:E9PF93 Uniprot:E9PF93
Length = 698
Score = 128 (50.1 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 53/256 (20%), Positives = 95/256 (37%)
Query: 235 EEKAFKKKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXX 294
E +K+IY W T++ G+ E E
Sbjct: 348 EHGRLSRKYIYSLYWSTLTLTTIGETPPPVKDE-EYLFVVVDFLVGVLIFATIVGNVGSM 406
Query: 295 XQSGTIKLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXX 354
+ E ++K I+Q+ F +++ L+ RV Y+W + +D +
Sbjct: 407 ISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPD 466
Query: 355 XXXWEMKSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFI 414
E+ + L+ LKKV +FQ +L E+ L+P ++ I K+GD EM+ I
Sbjct: 467 KLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYII 526
Query: 415 XXXXXXXXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVE 474
V LS G ++GE ++ + N +N I +++
Sbjct: 527 NEGKLAVVADDGVTQFVV----LSDGSYFGE-ISILNIKGSKSGNRRTANIRSIGYSDL- 580
Query: 475 AFAINTDDLRAIVYQY 490
F ++ DDL + +Y
Sbjct: 581 -FCLSKDDLMEALTEY 595
Score = 41 (19.5 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 507 YSQEWRTSKACVIQAAWCRYK--KRKLE--G-SLYAKENILQDQKAEAGGKP 553
YS + SK +++A Y K+ LE G + K+N++ ++ A AG P
Sbjct: 577 YSDLFCLSKDDLMEAL-TEYPEAKKALEEKGRQILMKDNLIDEELARAGADP 627
Score = 39 (18.8 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 52 FWNWIWLAVRIISTSLDPLFFYIFVVNDH 80
F+NW L R L + +++V D+
Sbjct: 184 FYNWYLLICRACFDELQSEYLMLWLVLDY 212
>UNIPROTKB|F1MBN0 [details] [associations]
symbol:CNGA2 "Cyclic nucleotide-gated olfactory channel"
species:9913 "Bos taurus" [GO:0007608 "sensory perception of smell"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0007608 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0005216 InterPro:IPR018488 OMA:GKDDHRA
GeneTree:ENSGT00550000074376 IPI:IPI00693519 UniGene:Bt.28014
EMBL:DAAA02068163 Ensembl:ENSBTAT00000027618 Uniprot:F1MBN0
Length = 663
Score = 117 (46.2 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 47/250 (18%), Positives = 93/250 (37%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+++IYC W T++ G+ E E +
Sbjct: 322 REYIYCLYWSTLTLTTIGETPPPVKDE-EYLFVIFDFLIGVLIFATIVGNVGSMISNMNA 380
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K ++ + F +S+ ++ +V Y+W + +D E+
Sbjct: 381 TRAEFQAKIDAVKHYMQFRKVSKEMEAKVIRWFDYLWTNKKSVDEREVLKNLPAKLRAEI 440
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ L LKKV +FQ +L E+ L+P ++ I ++GD EM+ I
Sbjct: 441 AINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLA 500
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
++ LS G +GE ++ + + N +N + +++ F ++
Sbjct: 501 VVADDGVTQYAL----LSAGSCFGE-ISILNIKGSKMGNRRTANIRSLGYSDL--FCLSK 553
Query: 481 DDLRAIVYQY 490
DDL V +Y
Sbjct: 554 DDLMEAVTEY 563
Score = 49 (22.3 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 53 WNWIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRTIF 101
+NW L R + L ++ +++V D+ V + +A + I LRT F
Sbjct: 153 YNWCLLVARACFSDLQKGYYIVWLVLDYVSDV---VYIADLFIRLRTGF 198
>UNIPROTKB|Q03041 [details] [associations]
symbol:CNGA2 "Cyclic nucleotide-gated olfactory channel"
species:9913 "Bos taurus" [GO:0007608 "sensory perception of smell"
evidence=ISS] [GO:0005216 "ion channel activity" evidence=ISS]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0030552 "cAMP
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR005821 Pfam:PF00520 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0016021 GO:GO:0050896 GO:GO:0007608 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0005216 PDB:1SY9 PDBsum:1SY9 GO:GO:0030552
InterPro:IPR018488 eggNOG:NOG300025 HOGENOM:HOG000007898
HOVERGEN:HBG000281 OrthoDB:EOG4N5VWD EMBL:X55010 IPI:IPI00693519
PIR:S11521 RefSeq:NP_001001139.1 UniGene:Bt.28014
ProteinModelPortal:Q03041 PRIDE:Q03041 GeneID:407172
KEGG:bta:407172 CTD:1260 InParanoid:Q03041 KO:K04949
EvolutionaryTrace:Q03041 NextBio:20818428 Uniprot:Q03041
Length = 663
Score = 117 (46.2 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 47/250 (18%), Positives = 93/250 (37%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+++IYC W T++ G+ E E +
Sbjct: 322 REYIYCLYWSTLTLTTIGETPPPVKDE-EYLFVIFDFLIGVLIFATIVGNVGSMISNMNA 380
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E ++K ++ + F +S+ ++ +V Y+W + +D E+
Sbjct: 381 TRAEFQAKIDAVKHYMQFRKVSKEMEAKVIRWFDYLWTNKKSVDEREVLKNLPAKLRAEI 440
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ L LKKV +FQ +L E+ L+P ++ I ++GD EM+ I
Sbjct: 441 AINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLA 500
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
++ LS G +GE ++ + + N +N + +++ F ++
Sbjct: 501 VVADDGVTQYAL----LSAGSCFGE-ISILNIKGSKMGNRRTANIRSLGYSDL--FCLSK 553
Query: 481 DDLRAIVYQY 490
DDL V +Y
Sbjct: 554 DDLMEAVTEY 563
Score = 49 (22.3 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 53 WNWIWLAVRIISTSLDPLFFYIFVVNDHKKCVDLDIKLAIIAISLRTIF 101
+NW L R + L ++ +++V D+ V + +A + I LRT F
Sbjct: 153 YNWCLLVARACFSDLQKGYYIVWLVLDYVSDV---VYIADLFIRLRTGF 198
>UNIPROTKB|F1S3S4 [details] [associations]
symbol:CNGA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042
GO:GO:0005216 InterPro:IPR018488 GeneTree:ENSGT00550000074376
EMBL:FP565676 Ensembl:ENSSSCT00000009644 OMA:CASDESE Uniprot:F1S3S4
Length = 687
Score = 120 (47.3 bits), Expect = 0.00083, P = 0.00083
Identities = 49/250 (19%), Positives = 94/250 (37%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+K++Y W T++ G+ + E +
Sbjct: 344 RKYVYSLYWSTLTLTTIGET-PPPVRDSEYVFVVADFLIGVLIFATIVGNIGSMISNMNA 402
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E +++ I+Q+ F +S+ +++RV Y+W + +D + E+
Sbjct: 403 ARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEI 462
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ L+ LKKV +F +L E+ L+P +Y I K+GD EM+ I
Sbjct: 463 AINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLA 522
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
V LS G ++GE ++ + N +N I +++ F ++
Sbjct: 523 VVADDGITQFVV----LSDGSYFGE-ISILNIKGSKAGNRRTANIKSIGYSDL--FCLSK 575
Query: 481 DDLRAIVYQY 490
DDL + +Y
Sbjct: 576 DDLMEALTEY 585
>UNIPROTKB|F1S3S0 [details] [associations]
symbol:CNG-1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042
GO:GO:0005216 InterPro:IPR018488 GeneTree:ENSGT00550000074376
OMA:WTMVIAR EMBL:CU915496 Ensembl:ENSSSCT00000009648 Uniprot:F1S3S0
Length = 688
Score = 120 (47.3 bits), Expect = 0.00083, P = 0.00083
Identities = 49/250 (19%), Positives = 94/250 (37%)
Query: 241 KKFIYCFRWGLQTVSCAGQNLQTSTHEGENXXXXXXXXXXXXXXXXXXXXXXXXXQSGTI 300
+K++Y W T++ G+ + E +
Sbjct: 345 RKYVYSLYWSTLTLTTIGET-PPPVRDSEYVFVVADFLIGVLIFATIVGNIGSMISNMNA 403
Query: 301 KLEEIKSKAREIEQWRTFEMLSQSLQQRVRNHQQYVWQEMRGIDVEXXXXXXXXXXXWEM 360
E +++ I+Q+ F +S+ +++RV Y+W + +D + E+
Sbjct: 404 ARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEI 463
Query: 361 KSELCLEVLKKVPMFQMMGKSILSEMCKCLKPVLYVQECCIVKEGDPICEMFFIXXXXXX 420
+ L+ LKKV +F +L E+ L+P +Y I K+GD EM+ I
Sbjct: 464 AINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLA 523
Query: 421 XXXXXXXXXXSVFKKYLSTGDFWGEELATSALDPDPLSNIPHSNCALISVTNVEAFAINT 480
V LS G ++GE ++ + N +N I +++ F ++
Sbjct: 524 VVADDGITQFVV----LSDGSYFGE-ISILNIKGSKAGNRRTANIKSIGYSDL--FCLSK 576
Query: 481 DDLRAIVYQY 490
DDL + +Y
Sbjct: 577 DDLMEALTEY 586
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.136 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 596 536 0.00093 119 3 11 22 0.47 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 630 (67 KB)
Total size of DFA: 356 KB (2176 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.09u 0.09s 41.18t Elapsed: 00:00:03
Total cpu time: 41.10u 0.09s 41.19t Elapsed: 00:00:03
Start: Fri May 10 01:32:49 2013 End: Fri May 10 01:32:52 2013