Query 007609
Match_columns 596
No_of_seqs 307 out of 1526
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 06:03:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007609.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007609hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fo0_A Actin-related protein 8 100.0 1.9E-94 6.5E-99 814.8 28.9 527 7-580 3-590 (593)
2 4am6_A Actin-like protein ARP8 100.0 1.7E-90 5.8E-95 762.6 24.4 516 14-580 36-652 (655)
3 3qb0_A Actin-related protein 4 100.0 7E-66 2.4E-70 563.4 24.7 375 175-579 63-497 (498)
4 3dwl_A Actin-related protein 3 100.0 3.9E-65 1.3E-69 551.6 18.1 328 174-580 72-422 (427)
5 2fxu_A Alpha-actin-1, actin, a 100.0 2.7E-59 9.3E-64 499.5 25.3 322 174-580 50-375 (375)
6 1k8k_B ARP2, actin-like protei 100.0 1.2E-60 4E-65 513.2 11.6 320 174-577 53-388 (394)
7 1k8k_A ARP3, actin-like protei 100.0 8.3E-56 2.8E-60 479.0 23.4 327 174-581 58-415 (418)
8 1jce_A ROD shape-determining p 99.9 1.5E-25 5.1E-30 235.6 21.0 278 176-558 42-330 (344)
9 3h1q_A Ethanolamine utilizatio 99.7 2.4E-16 8.1E-21 159.7 12.4 214 194-552 59-272 (272)
10 1dkg_D Molecular chaperone DNA 99.5 3.4E-14 1.2E-18 150.9 6.0 224 241-554 138-381 (383)
11 2v7y_A Chaperone protein DNAK; 99.4 8.6E-14 2.9E-18 153.8 8.6 224 241-554 112-350 (509)
12 3qfu_A 78 kDa glucose-regulate 99.3 3.1E-13 1.1E-17 143.8 4.1 91 241-332 156-255 (394)
13 3i33_A Heat shock-related 70 k 99.3 2.3E-12 7.8E-17 137.8 5.1 91 241-332 161-263 (404)
14 1yuw_A Heat shock cognate 71 k 99.1 3.9E-10 1.3E-14 125.7 11.0 91 241-332 142-242 (554)
15 2ych_A Competence protein PILM 99.0 3.4E-09 1.2E-13 112.0 14.6 90 258-365 156-252 (377)
16 2kho_A Heat shock protein 70; 99.0 5E-10 1.7E-14 126.1 7.2 139 217-364 120-276 (605)
17 3d2f_A Heat shock protein homo 98.9 1.8E-09 6.2E-14 122.8 11.3 91 241-332 141-246 (675)
18 4gni_A Putative heat shock pro 98.9 3.5E-09 1.2E-13 113.3 9.4 111 216-333 134-255 (409)
19 4a2a_A Cell division protein F 98.8 3.1E-08 1.1E-12 106.5 12.8 88 258-363 173-265 (419)
20 4b9q_A Chaperone protein DNAK; 98.7 7E-08 2.4E-12 108.6 12.1 109 217-332 120-241 (605)
21 2fsj_A Hypothetical protein TA 98.4 4.2E-07 1.4E-11 95.2 8.9 137 174-334 78-240 (346)
22 2d0o_A DIOL dehydratase-reacti 97.7 0.00032 1.1E-08 75.9 13.4 93 253-363 369-466 (610)
23 1nbw_A Glycerol dehydratase re 97.7 0.00015 5.3E-09 78.6 10.5 72 274-363 392-468 (607)
24 3js6_A Uncharacterized PARM pr 97.2 0.00051 1.8E-08 71.9 7.6 68 267-334 154-232 (355)
25 2zgy_A Plasmid segregation pro 97.2 0.00039 1.3E-08 71.5 6.3 71 263-333 136-212 (320)
26 4apw_A ALP12; actin-like prote 96.8 0.0013 4.3E-08 68.1 6.3 67 267-333 149-219 (329)
27 1t6c_A Exopolyphosphatase; alp 88.1 1.6 5.6E-05 44.4 9.3 70 256-328 101-178 (315)
28 3mdq_A Exopolyphosphatase; str 81.5 1.6 5.4E-05 44.4 5.5 40 286-327 131-170 (315)
29 3cer_A Possible exopolyphospha 79.0 1.6 5.4E-05 45.0 4.6 42 286-327 146-191 (343)
30 3cet_A Conserved archaeal prot 78.8 1.4 4.9E-05 45.0 4.1 25 286-310 127-151 (334)
31 1u6z_A Exopolyphosphatase; alp 73.9 4.4 0.00015 44.1 6.5 40 287-328 138-177 (513)
32 4ehu_A Activator of 2-hydroxyi 73.4 0.58 2E-05 46.3 -0.6 63 269-331 73-140 (276)
33 3hi0_A Putative exopolyphospha 70.9 6.6 0.00023 42.6 7.1 39 286-326 140-178 (508)
34 3aap_A Ectonucleoside triphosp 50.5 13 0.00046 38.1 4.6 35 286-320 140-176 (353)
35 2ews_A Pantothenate kinase; PA 41.0 6.2 0.00021 39.5 0.2 73 472-553 214-287 (287)
36 2fsj_A Hypothetical protein TA 33.7 5.9 0.0002 40.5 -1.3 31 20-51 23-53 (346)
37 4apw_A ALP12; actin-like prote 33.3 14 0.00048 37.4 1.5 46 494-553 278-323 (329)
38 3js6_A Uncharacterized PARM pr 32.8 4.2 0.00014 42.0 -2.6 45 493-553 289-335 (355)
39 2i7n_A Pantothenate kinase 1; 32.7 15 0.00052 37.9 1.6 74 472-551 283-357 (360)
40 2zgy_A Plasmid segregation pro 31.6 7.4 0.00025 39.1 -0.9 46 496-552 274-319 (320)
41 2e1z_A Propionate kinase; TDCD 29.0 23 0.0008 37.1 2.3 31 286-317 210-240 (415)
42 1g99_A Acetate kinase; alpha/b 26.1 26 0.00088 36.7 2.0 31 286-317 202-232 (408)
43 2gup_A ROK family protein; sug 26.0 1.2E+02 0.004 29.5 6.8 52 257-311 87-143 (292)
44 4am6_A Actin-like protein ARP8 25.5 25 0.00086 39.1 1.8 30 98-127 117-153 (655)
45 1hux_A Activator of (R)-2-hydr 23.2 11 0.00039 36.9 -1.3 79 474-565 187-267 (270)
46 3djc_A Type III pantothenate k 23.0 1.2E+02 0.0042 29.6 6.2 48 288-335 4-52 (266)
47 2iir_A Acetate kinase; transfe 22.9 27 0.00093 36.5 1.4 31 286-317 201-231 (403)
48 3cj1_A Ectonucleoside triphosp 22.5 67 0.0023 34.1 4.4 35 286-320 190-225 (456)
49 3uv0_A Mutator 2, isoform B; F 21.1 43 0.0015 27.9 2.0 22 16-38 10-31 (102)
50 2qm1_A Glucokinase; alpha-beta 20.6 2.1E+02 0.0072 27.9 7.6 47 263-311 106-159 (326)
No 1
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-94 Score=814.75 Aligned_cols=527 Identities=30% Similarity=0.520 Sum_probs=379.8
Q ss_pred ccchhhHhhcCCc-EEEEcCCCceeeeeccCCCCCCccceeeEEecCCCCccccccccccccc--cchhhhhHHHHHHHH
Q 007609 7 VVPSQLIAERGSN-LVVINPGSANIRIGLAQHDTPLNIPHCIARRTSQVPKRNVVDQMLNSQV--TTSQHVERERAYDVI 83 (596)
Q Consensus 7 ~~~~~~~~~~~~~-~iVihpGS~~lriG~asd~~P~~ip~~iAr~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 83 (596)
|+|+++.++++++ ||||||||+|||||+|+|.+|++||||||||.++.....+++..+.... ..+..+++......+
T Consensus 3 ~~~~~~~~~~~~~~iIVIdpGS~~~riG~A~d~~P~~iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (593)
T 4fo0_A 3 LVPESLQEQIQSNFIIVIHPGSTTLRIGRATDTLPASIPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMV 82 (593)
T ss_dssp CCCGGGTTTSGGGGEEEEECCSSEEEEEETTCSSCEEEECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHH
T ss_pred CCCCccccccCCCCEEEEeCCCCCeEeeecCCCCCCeeeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHH
Confidence 7999999998766 9999999999999999999999999999999876433333333322111 223333444444433
Q ss_pred HhhccCCcchHhhhcCCCCccccccccccccccccccceeecccccCCCCCCCcccccccccccccccccccCCCCCccc
Q 007609 84 ASLMKIPFLDEEVANNSFPRKMGRVDAFNQQNSRKDVAFSWTNVYEKEPMPSTALGEKSSSSMNHGIIKESMGQHRNTDI 163 (596)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~e~~~~~~~~~~ 163 (596)
.+.++.+ +..+++++ ++++++.+++||++.+|+.+++++++.+
T Consensus 83 ~~~~~~~----------------------------------~~~~~~r~---~~~s~~~~~~~n~~~~p~~i~~~~~~~~ 125 (593)
T 4fo0_A 83 DQAIWSK----------------------------------KMSNGTRR---IPVSPEQARSYNKQMRPAILDHCSGNKW 125 (593)
T ss_dssp HHHHHHS----------------------------------CCTTSCCC---CCCCHHHHHHHHTTCCCEEEESSCSCCC
T ss_pred HHHHHHH----------------------------------hhhccccc---CCCcHHHhhhhhccCCCcccCCCCcccc
Confidence 3333211 00111121 2355666789999999999988866543
Q ss_pred cccccccccCcceEEccccccCCCCCCcEEEcceecCeeeec--CCCCccccHHHHHHHHHHHhhhhcCCCCCCCcccce
Q 007609 164 KELNSSERKFREFICGEEALRVSPTEPYCIHRPIRRGHLNIS--QHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSA 241 (596)
Q Consensus 164 ~~~~~~~~~~~~~~vGeeAl~~~~~~~~~l~~Pi~~G~in~~--~~~s~~~~~~dle~Iw~~~l~~~L~i~~~d~~~y~~ 241 (596)
. +....+++|||++|+++++.+.|.|+|||+||.||++ +|.|++.+|+|||+||+|+|+++|+|++++.+.|.+
T Consensus 126 ~----~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pv 201 (593)
T 4fo0_A 126 T----NTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAVLADIEVIWSHAIQKYLEIPLKDLKYYRC 201 (593)
T ss_dssp C----CCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEE
T ss_pred c----cccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcCHHHHHHHHHHHHHHhcCCCchhccCCcE
Confidence 2 2234478999999999988889999999999999997 566999999999999999999999999999777756
Q ss_pred eeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCceEEEEEeCCCceEEEEeeCCeecccCcEEecchHH
Q 007609 242 ILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGE 321 (596)
Q Consensus 242 VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~ 321 (596)
||+.|+.+.+.++++|+++|||.|+||+++++++++||+||+|++||||||||+++|+|+||+||+++.++++++++||+
T Consensus 202 lltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~ 281 (593)
T 4fo0_A 202 ILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGS 281 (593)
T ss_dssp EEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEeCCCceeeeeeECCEEehhheEEecccHH
Confidence 66666666777767799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccccccccccHHHHHHHHHhceeccCCccccc-eeeecccCCCCCC-Cceeeee---eecC
Q 007609 322 DISRCLLWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAV-AVVHSYEDGMPPG-SHKTRLI---ALNV 396 (596)
Q Consensus 322 dit~~l~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~-~~~~~~~~~~p~~-~~k~~~~---~~~~ 396 (596)
+||++|.+||+.++ +| +.+.++.++.|++++++|||++|||+.+..... ..++. ..|++ +.++.++ +...
T Consensus 282 ~lt~~L~~lL~~~~-~~-~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~~~~---~~p~~~~~~~~~~~~~E~~~ 356 (593)
T 4fo0_A 282 DVSRCFYWLMQRAG-FP-YRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHEFQI---RHPDSPALLYQFRLGDEKLQ 356 (593)
T ss_dssp HHHHHHHHHHHHTT-CS-CTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEEEEE---CCTTSCEEEEEEEECTHHHH
T ss_pred HHHHHHHHHHHhcC-CC-ccccccccchhHHHHHHHHHHhcccccchHHhhhhhhhc---ccCCCCceeeEEeccchhhc
Confidence 99999999998775 44 455667778899999999999999997644322 12222 23433 3344443 3567
Q ss_pred CCCCCCCCcccCCCCCCCC---CCCCCCCccc---------------------------cccCCccccCC-CCCCCCCCC
Q 007609 397 PPMGLFYPKLLVPDVYPPP---PRSWFNDYED---------------------------MLEDTWHTDFP-RRSDISDNF 445 (596)
Q Consensus 397 aP~~lf~p~i~~~e~~~~p---~~~~~~d~ed---------------------------~~~d~~~~~~~-~r~~~~E~l 445 (596)
+|+++|+|.++..+..... .+. ..++++ ..+++....++ +|+.++|.+
T Consensus 357 ~p~~lf~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~e~~~~pe~l 435 (593)
T 4fo0_A 357 APMALFYPATFGIVGQKMTTLQHRS-QGDPEDPHDEHYLLATQSKQEQSAKATADRKSASKPIGFEGDLRGQSSDLPERL 435 (593)
T ss_dssp HHHTTTSGGGGCCCSSCCEEECC---------------------------------------------------------
T ss_pred CchhhcChhhhcccccccchhhhhc-ccCcccchhhhhhhhcccchhhhhhcccccccccCCCCcccccccccccCchhc
Confidence 9999999988754321100 000 001111 12233334444 789999999
Q ss_pred C-CCCCCCCCCC-------CCCCcc--------CCCCCccccCCHHHHHHHHHHhcCChhHHHHHhcCeEEEcCCCCcCC
Q 007609 446 Y-PGINVGLPMW-------ESYPVL--------TTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGG 509 (596)
Q Consensus 446 f-p~~~g~~~~~-------~~~~~~--------~~~~~~~~~~~L~~aI~~sI~~~~~~d~r~~L~~nIvLvGG~S~i~G 509 (596)
| |....+.... ...+.. +......+..||++||++||.+|+..|+|++||+||+|+||+|+|||
T Consensus 436 f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~~D~r~~L~~NIvltGG~s~~pG 515 (593)
T 4fo0_A 436 HSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHK 515 (593)
T ss_dssp -----------------------------------CHHHHSCCCHHHHHHHHHHTCSSHHHHHHHHHEEEEESSTTCCBT
T ss_pred cCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCcHHHHHHHhCCEEEEchhhchhc
Confidence 8 4332111100 000000 00011234579999999999999447999999999999999999999
Q ss_pred hHHHHHHHHhhhCCCCCC--cceEEEcCC--CCCCceeEEeceeeeeccCCcccceeeHHHHHhcCcceeeeccC
Q 007609 510 LIPAVEERVLHAIPSNEA--IDMVEVLQS--RTNPTYVSWKGGAVLGILDFGRDAWIHREDWIRNGIHIGSGRKY 580 (596)
Q Consensus 510 f~~RL~~eL~~~~p~~~~--~~~V~v~~~--~~dp~~~aW~GgSIla~L~sf~~~wItr~EYee~G~~il~rk~~ 580 (596)
|.+||++||..++|..++ +.+|+|++. ..||++++|+||||||+|++|+++||||+||+|+|++||++||+
T Consensus 516 f~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wItk~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 516 AQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLRERAA 590 (593)
T ss_dssp HHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEEHHHHHHHTTHHHHHHCS
T ss_pred HHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeECHHHHHhhCcHHHhhcCC
Confidence 999999999999986542 235677763 36999999999999999999999999999999999999999995
No 2
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=1.7e-90 Score=762.58 Aligned_cols=516 Identities=21% Similarity=0.374 Sum_probs=381.1
Q ss_pred hhcCCcEEEEcCCCceeeeeccCCCCCCccceeeEEecCCC--CccccccccccccccchhhhhHHHHHHHHHhhccCCc
Q 007609 14 AERGSNLVVINPGSANIRIGLAQHDTPLNIPHCIARRTSQV--PKRNVVDQMLNSQVTTSQHVERERAYDVIASLMKIPF 91 (596)
Q Consensus 14 ~~~~~~~iVihpGS~~lriG~asd~~P~~ip~~iAr~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (596)
...+++||||||||+|||||||||++|+|||||||||++.. |.....+. +....+..+++++.+.+|++.||.+
T Consensus 36 ~~~~~~~IVIHpGS~~lRIG~AsD~~P~~ip~~iA~~~~~~~~~~~~~~~~---~~~~~~~~~~f~~~~~~~~~~~k~r- 111 (655)
T 4am6_A 36 LNDPTATIVIHPGSNSIKIGFPKDDHPVVVPNCVAVPKKWLDLENSEHVEN---VCLQREQSEEFNNIKSEMEKNFRER- 111 (655)
T ss_dssp CCCGGGEEEEECCSSEEEEECTTSSSCEEEESCEEEEGGGSCCSSSCCCCT---TCCCSCCCHHHHHHHHHHHHHHHHH-
T ss_pred ccCCCCeEEEcCCCcceeeeecCCCCCcccceeEEeccccccCCCccccCc---cccchhhhHHHHHHHHHHHHHHHHH-
Confidence 34579999999999999999999999999999999997651 11111111 0012244578888888888888643
Q ss_pred chHhhhcCCCCccccccccccccccccccceeecccccCCCCCCCcccccccccccccccccccCCCCCccccccccccc
Q 007609 92 LDEEVANNSFPRKMGRVDAFNQQNSRKDVAFSWTNVYEKEPMPSTALGEKSSSSMNHGIIKESMGQHRNTDIKELNSSER 171 (596)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~e~~~~~~~~~~~~~~~~~~ 171 (596)
| +.++||+. +++++++++||++.+||.|++|||+...+|...
T Consensus 112 ----m-----------------------------r~~k~r~~---pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~-- 153 (655)
T 4am6_A 112 ----M-----------------------------RYYKRKVP---GNAHEQVVSFNENSKPEIISEKNDPSPIEWIFD-- 153 (655)
T ss_dssp ----H-----------------------------HHHSCCCS---TTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCC--
T ss_pred ----H-----------------------------hhcCCCCC---CCCHHHHHHhcCCCCCeECCCCCCccccccccC--
Confidence 3 33444433 366677889999999999999988877666432
Q ss_pred cCcceEEccccccCCCCCCcEEEcceecCeeeec--CCCCccccHHHHHHHHHHHhhh-hcCCCCCCCcccceeeecCCC
Q 007609 172 KFREFICGEEALRVSPTEPYCIHRPIRRGHLNIS--QHYPMQQVLEDLYAIWDWILTE-KLHIPRSERNLYSAILVLPES 248 (596)
Q Consensus 172 ~~~~~~vGeeAl~~~~~~~~~l~~Pi~~G~in~~--~~~s~~~~~~dle~Iw~~~l~~-~L~i~~~d~~~y~~VLvip~~ 248 (596)
.++++||+||+.+. .+.+.++|||++|.++++ ||.|+|.+|+++|.||+|+|.+ +|+++++++..+ +||+++++
T Consensus 154 -~~d~~VGdEA~~~~-r~~l~l~~PI~~GvI~~~s~Dy~s~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~-pVLLTEPp 230 (655)
T 4am6_A 154 -DSKLYYGSDALRCV-DEKFVIRKPFRGGSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKPTKFNQY-KVVLVIPD 230 (655)
T ss_dssp -TTSCEEHHHHHTBC-TTTEEEECSEETTEECTTCSSCSSHHHHHHHHHHHHHHHHBSSSCBCCGGGGGGC-EEEEEECT
T ss_pred -CCCEEEehHHhhCC-ccCeEEeccccCCEecccCCccccccccHHHHHHHHHHHhccccccccccccCCC-cEEEEeCC
Confidence 26899999999864 368999999999999854 6779999999999999999984 899988632111 78888888
Q ss_pred CChHHHHH-HHHHHHHhcCCCeEEEeehhhHHhhhcC-CceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHH
Q 007609 249 FDNREIKE-MLSIVLRDLRFASAVVHQEGLAAVFGNG-LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRC 326 (596)
Q Consensus 249 ~~~~~vr~-l~eilfe~~gf~~v~~~~esvlA~fgaG-~stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~ 326 (596)
++++..|+ |+++|||.|||++++++++++||+||+| .++|||||+|++.|+|+||+||+++.+++.++++||+++|++
T Consensus 231 lnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~y 310 (655)
T 4am6_A 231 IFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRL 310 (655)
T ss_dssp TCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHH
Confidence 87777765 9999999999999999999999999999 699999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcccccccccccHHHHHHHHHhceeccCCccccc-eeeecccCCCCCCCceeeee---eecCCCCCCC
Q 007609 327 LLWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAV-AVVHSYEDGMPPGSHKTRLI---ALNVPPMGLF 402 (596)
Q Consensus 327 l~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~-~~~~~~~~~~p~~~~k~~~~---~~~~aP~~lf 402 (596)
|.++|+.++ +| |++++|.+..+++++++|||++|||+..+++.. ..++.+.++.+ +.||.++ +.++||++||
T Consensus 311 L~kLL~~rg-yp-y~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~~q~~~f~~r~P~~~--~~ky~i~vgdErflaPe~lF 386 (655)
T 4am6_A 311 FALFLLQSD-FP-LQDWKIDSKHGWLLAERLKKNFTTFQDADVAVQLYNFMNRSPNQP--TEKYEFKLFDEVMLAPLALF 386 (655)
T ss_dssp HHHHHHHTT-CS-CCSCCTTSHHHHHHHHHHHHHHCCCCGGGCCSEEEEEEECCSSSC--EEEEEEEESSHHHHHHHGGG
T ss_pred HHHHHHHcC-CC-ccccCCCCcchHHHHHHHHHheEEEcccchhhhhhcceeccCCCC--CcceEEEECCeehhCchhcC
Confidence 999998876 33 355677778899999999999999976555422 23333333333 4566554 4678999999
Q ss_pred CCcccCCCCCCCCC----CCCCCCcccc----ccCCccccCCCCCCCCCCCCCCCCCC--CCC-----------CCCCCc
Q 007609 403 YPKLLVPDVYPPPP----RSWFNDYEDM----LEDTWHTDFPRRSDISDNFYPGINVG--LPM-----------WESYPV 461 (596)
Q Consensus 403 ~p~i~~~e~~~~p~----~~~~~d~ed~----~~d~~~~~~~~r~~~~E~lfp~~~g~--~~~-----------~~~~~~ 461 (596)
+|.++..+...... +.+++...|. ++|..+..-.. ......++..... ++. .+..+.
T Consensus 387 ~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~q~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (655)
T 4am6_A 387 FPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLSQFE--SKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPE 464 (655)
T ss_dssp STHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHHHHH--HHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSC
T ss_pred ChhhcccccccccccchhhhhcCccccccCCCCCCccchhHHh--hhccccCCCCccHhhhhhhhhcccccccccccCCc
Confidence 99998655433221 1234443333 33332221000 0000001000000 000 000000
Q ss_pred cCCCCCccccCCHHHHHHHHHHhcCC-hhHH--HHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCC------------
Q 007609 462 LTTKPKKEEKIGLAEAVTSSILSTGR-IDLQ--RKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNE------------ 526 (596)
Q Consensus 462 ~~~~~~~~~~~~L~~aI~~sI~~~~~-~d~r--~~L~~nIvLvGG~S~i~Gf~~RL~~eL~~~~p~~~------------ 526 (596)
..........+||++||.+||.+++. .|.+ ++||+||+||||||+||||...|++||....|...
T Consensus 465 ~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~ 544 (655)
T 4am6_A 465 NYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKL 544 (655)
T ss_dssp SCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHH
T ss_pred ccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHH
Confidence 00111123467999999999995432 3665 49999999999999999999999999988666321
Q ss_pred ----------------------------------------------------CcceEEEcC--CCCCCceeEEeceeeee
Q 007609 527 ----------------------------------------------------AIDMVEVLQ--SRTNPTYVSWKGGAVLG 552 (596)
Q Consensus 527 ----------------------------------------------------~~~~V~v~~--~~~dp~~~aW~GgSIla 552 (596)
.+-+|+|++ +++||++++|+||||||
T Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla 624 (655)
T 4am6_A 545 TKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLA 624 (655)
T ss_dssp HHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHHHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHT
T ss_pred HHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhccccCCceeeEEeCCccccCcceeEEecceeee
Confidence 001256665 45889999999999999
Q ss_pred ccCCcccceeeHHHHHhcCcceeeeccC
Q 007609 553 ILDFGRDAWIHREDWIRNGIHIGSGRKY 580 (596)
Q Consensus 553 ~L~sf~~~wItr~EYee~G~~il~rk~~ 580 (596)
+|++|++||||++||+|+|++|+++||+
T Consensus 625 ~l~~f~e~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 625 QIKLVEELFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp TSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred ecccHhheeecHHHHhhhcchheEeccc
Confidence 9999999999999999999999999985
No 3
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-66 Score=563.36 Aligned_cols=375 Identities=21% Similarity=0.313 Sum_probs=273.0
Q ss_pred ceEEccccccCCCCCCcEEEcceecCeeeecCCCCccccHHHHHHHHHHHhhhhcCCCCCCCcccceeeecCCCCChHHH
Q 007609 175 EFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREI 254 (596)
Q Consensus 175 ~~~vGeeAl~~~~~~~~~l~~Pi~~G~in~~~~~s~~~~~~dle~Iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~v 254 (596)
+++||+++.... ++.+.+++||++|.+. ||+++|.||+|+|.+.|++.+.++. +|||+++++++...
T Consensus 63 ~~~vG~e~~~~~-r~~l~l~~Pi~~GvI~---------dwd~~E~iw~~~f~~~L~v~p~~~~---pvlltep~~n~~~~ 129 (498)
T 3qb0_A 63 KKIFSEQSIGIP-RKDYELKPIIENGLVI---------DWDTAQEQWQWALQNELYLNSNSGI---PALLTEPVWNSTEN 129 (498)
T ss_dssp CEECCTTGGGSC-CTTEEEEESEETTEES---------CHHHHHHHHHHHHHHTSCCSCCTTC---CEEEEECTTCCHHH
T ss_pred cEEEecHHHhcC-cCceEEeccCcCCEEc---------cHHHHHHHHHHHHHhhhCCCcccCC---ceEEEeCCCCcHHH
Confidence 457898754432 4689999999999998 9999999999999888999887762 58999999998877
Q ss_pred HH-HHHHHHHhcCCCeEEEeehhhHHhhhcCCceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHHHHHHHh
Q 007609 255 KE-MLSIVLRDLRFASAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRH 333 (596)
Q Consensus 255 r~-l~eilfe~~gf~~v~~~~esvlA~fgaG~stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l~~lL~~ 333 (596)
|+ |++++||.|||++++++.+++||+||+|+++|||||+|++.|+|+||+||+++++++.++++||+++|++|.++|+.
T Consensus 130 Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 130 RKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHh
Confidence 75 99999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred cCCCCCcc-----------cccc------cccc-cHHHHHHHHHhceeccCC-cccc------ceeeecccCCCCCCCce
Q 007609 334 HQTWPQIR-----------TDIL------TKAM-DLLMLNRIKESYCEIKEG-EIDA------VAVVHSYEDGMPPGSHK 388 (596)
Q Consensus 334 ~~~~p~~~-----------~~~l------~~~~-d~~l~e~lKe~~c~v~~~-~~~~------~~~~~~~~~~~p~~~~k 388 (596)
.+..|.|. .+.+ .+.. +.+++++|||++|||+.+ +.+. ......|+ +|++..
T Consensus 210 ~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~~~~~~~ye--LPDG~~- 286 (498)
T 3qb0_A 210 KEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIE--SPWNEE- 286 (498)
T ss_dssp SCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHHTCCCEEEE--CSSSCE-
T ss_pred ccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhccCcCceEEE--CCCCCE-
Confidence 54333321 1111 1112 456999999999999875 2221 11123344 787753
Q ss_pred eeee-e-ecCCCCCCCCCcccCC-CCCCCCCCCCCCCccccccCCccccC-CCCCCCCCCCC-CCCCCCCC--CCCCCCc
Q 007609 389 TRLI-A-LNVPPMGLFYPKLLVP-DVYPPPPRSWFNDYEDMLEDTWHTDF-PRRSDISDNFY-PGINVGLP--MWESYPV 461 (596)
Q Consensus 389 ~~~~-~-~~~aP~~lf~p~i~~~-e~~~~p~~~~~~d~ed~~~d~~~~~~-~~r~~~~E~lf-p~~~g~~~--~~~~~~~ 461 (596)
..+. + ...+|+.||+|.++.. +..+. ..+-..+..+-.. +.+.. .+... ........ ..+.++.
T Consensus 287 i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~--------~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 357 (498)
T 3qb0_A 287 IVFDNETRYGFAEELFLPKEDDIPANWPR--------SNSGVVKTWRNDYVPLKRT-KPSGVNKSDKKVTPTEEKEQEAV 357 (498)
T ss_dssp EEECHHHHHHHHHTTTSCCGGGSCTTSCC--------CSSSCCCCCSCCCCCCCBC-C----------------------
T ss_pred EEECchHhhhCchhhCCHhHcCCcccccc--------ccccccccccccccccccc-ccccccccccccccccccccccc
Confidence 3332 3 4568888998876632 10000 0000111111100 00000 00000 00000000 0000000
Q ss_pred -------------------cC-----CCCCccccCCHHHHHHHHHHhcCChhHHHHHhcCeEEEcCCCCcCChHHHHHHH
Q 007609 462 -------------------LT-----TKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEER 517 (596)
Q Consensus 462 -------------------~~-----~~~~~~~~~~L~~aI~~sI~~~~~~d~r~~L~~nIvLvGG~S~i~Gf~~RL~~e 517 (596)
.| ......+..||+++|++||.+| +.|+|+.||+||+|+||+|++|||.+||++|
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~c-d~d~r~~L~~nIvLsGGst~~pGf~~Rl~~E 436 (498)
T 3qb0_A 358 SKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSS-DVDLRATLAHNVVLTGGTSSIPGLSDRLMTE 436 (498)
T ss_dssp -------------------------------CCSCCHHHHHHHHHHTS-CTTTHHHHHTTEEEESGGGGSTTHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccCCCchHHHHHHHHhC-CHHHHHHHhcCEEEeCCccCchhHHHHHHHH
Confidence 00 0000125689999999999999 8999999999999999999999999999999
Q ss_pred HhhhCCCCCCcceEEEcCC--CCCCceeEEeceeeeeccCCcccceeeHHHHHhcCc-ceeeecc
Q 007609 518 VLHAIPSNEAIDMVEVLQS--RTNPTYVSWKGGAVLGILDFGRDAWIHREDWIRNGI-HIGSGRK 579 (596)
Q Consensus 518 L~~~~p~~~~~~~V~v~~~--~~dp~~~aW~GgSIla~L~sf~~~wItr~EYee~G~-~il~rk~ 579 (596)
|..+.| ..+ |+|... ..+|.+++|+||||||+|++|+++||||+||+|.|+ +|++|||
T Consensus 437 l~~l~p-~~~---i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 437 LNKILP-SLK---FRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp HHHHST-TSC---CCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHHHHHTT
T ss_pred HHHhCC-CCe---eEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCcHhhccccC
Confidence 999999 543 455542 268999999999999999999999999999999999 9999998
No 4
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-65 Score=551.61 Aligned_cols=328 Identities=21% Similarity=0.303 Sum_probs=262.1
Q ss_pred cceEEccccccCCCCCCcEEEcceecCeeeecCCCCccccHHHHHHHHHHHhhhhcCCCCCCCcccceeeecCCCCChHH
Q 007609 174 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNRE 253 (596)
Q Consensus 174 ~~~~vGeeAl~~~~~~~~~l~~Pi~~G~in~~~~~s~~~~~~dle~Iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~ 253 (596)
++++||+||+... ...+.++|||++|.+. ||+++|.||+|+|++.|+++++++ +||++++++++..
T Consensus 72 ~~~~vG~ea~~~~-~~~l~~~~Pi~~GvI~---------dwd~~e~iw~~~~~~~L~v~~~~~----pvlltep~~~~~~ 137 (427)
T 3dwl_A 72 LDFFIGNDALKKA-SAGYSLDYPIRHGQIE---------NWDHMERFWQQSLFKYLRCEPEDH----YFLLTEPPLNPPE 137 (427)
T ss_dssp SCCEETHHHHHTH-HHHCCCCCSEETTEEC---------CHHHHHHHHHHHHHTTSCCCGGGC----EEEEEECTTCCHH
T ss_pred CCeEEchHHhhCc-ccCcEEecCcccCeec---------cHHHHHHHHHHHHhHhhCCCCcCC----cEEEEcCCCCCHH
Confidence 5789999998865 2378999999999998 999999999999999999988877 7999999999888
Q ss_pred HHH-HHHHHHHhcCCCeEEEeehhhHHhhhcC--------CceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHH
Q 007609 254 IKE-MLSIVLRDLRFASAVVHQEGLAAVFGNG--------LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDIS 324 (596)
Q Consensus 254 vr~-l~eilfe~~gf~~v~~~~esvlA~fgaG--------~stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit 324 (596)
.|+ ++|++||.||||+++++.+++||+||+| .++|||||+|++.|+|+||+||+++.+++.++++||+++|
T Consensus 138 ~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt 217 (427)
T 3dwl_A 138 NRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVT 217 (427)
T ss_dssp HHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHH
T ss_pred HHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHH
Confidence 775 9999999999999999999999999999 6899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcccccccccccHHHHHHHHHhceeccCCccccceeeecccCCCCCCCceeeeeeecCCCCCCCCC
Q 007609 325 RCLLWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLIALNVPPMGLFYP 404 (596)
Q Consensus 325 ~~l~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~~k~~~~~~~~aP~~lf~p 404 (596)
++|.++|+.++. . ..+.+++++|||++|||+.+... +...+.. .+.....+.+. .|.|
T Consensus 218 ~~L~~lL~~~~~-------~---~~~~~~~~~IKe~~cyv~~d~~~---e~~~~~~-~~~~~~~~~l~----~~~g---- 275 (427)
T 3dwl_A 218 YFVQSLLRDRNE-------P---DSSLKTAERIKEECCYVCPDIVK---EFSRFDR-EPDRYLKYASE----SITG---- 275 (427)
T ss_dssp HHHHHTTC------------------CHHHHHHHHHHCCCCSCHHH---HHHHTTC------CCBCC-------------
T ss_pred HHHHHHHHHcCC-------C---chhHHHHHHHHHhcCcccCCHHH---HHHHhhc-CccccceeEee----CCCC----
Confidence 999999976642 1 35678999999999999864110 0011110 01000000000 0111
Q ss_pred cccCCCCCCCCCCCCCCCccccccCCccccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCccc-cCCHHHHHHHH
Q 007609 405 KLLVPDVYPPPPRSWFNDYEDMLEDTWHTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEE-KIGLAEAVTSS 481 (596)
Q Consensus 405 ~i~~~e~~~~p~~~~~~d~ed~~~d~~~~~~~-~r~~~~E~lf-p~~~g~~~~~~~~~~~~~~~~~~~-~~~L~~aI~~s 481 (596)
..+.+.++ +||.++|.|| |+..+ .+ ..||+++|.+|
T Consensus 276 ------------------------~~~~i~ig~erf~~pE~LF~P~~~g-----------------~~~~~gI~~~i~~s 314 (427)
T 3dwl_A 276 ------------------------HSTTIDVGFERFLAPEIFFNPEIAS-----------------SDFLTPLPELVDNV 314 (427)
T ss_dssp ----------------------------CBCCTHHHHSGGGGTCGGGTC-----------------SSCCSCHHHHHHHH
T ss_pred ------------------------CeeEEEEChHhhhChhhccCchhcC-----------------CccCCCccHHHHHH
Confidence 00123344 6899999999 65544 23 46999999999
Q ss_pred HHhcCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCC-----------cceEEEcCCCCCCceeEEeceee
Q 007609 482 ILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEA-----------IDMVEVLQSRTNPTYVSWKGGAV 550 (596)
Q Consensus 482 I~~~~~~d~r~~L~~nIvLvGG~S~i~Gf~~RL~~eL~~~~p~~~~-----------~~~V~v~~~~~dp~~~aW~GgSI 550 (596)
|.+| |+|+|++||+||+|+||+|++|||.+||++||+.+.|.... --+|+|.. +.+|++++|+||||
T Consensus 315 I~~c-~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~-~~~r~~s~WiGGSi 392 (427)
T 3dwl_A 315 VQSS-PIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVIS-HKRQRNAVWFGGSL 392 (427)
T ss_dssp HHTS-CHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEEC-CTTCTTHHHHHHHH
T ss_pred HHhC-CHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEec-CCccccceecCcee
Confidence 9999 99999999999999999999999999999999998743110 01456664 35899999999999
Q ss_pred eeccCCcccceeeHHHHHhcCcceeeeccC
Q 007609 551 LGILDFGRDAWIHREDWIRNGIHIGSGRKY 580 (596)
Q Consensus 551 la~L~sf~~~wItr~EYee~G~~il~rk~~ 580 (596)
||+|++|+++||||+||+|+|++|++|+++
T Consensus 393 lasl~~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 393 LAQTPEFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp HHHSTTHHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred eccccchhheeEEHHHHhhhChHhheeccc
Confidence 999999999999999999999999998875
No 5
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=2.7e-59 Score=499.46 Aligned_cols=322 Identities=19% Similarity=0.373 Sum_probs=261.2
Q ss_pred cceEEccccccCCCCCCcEEEcceecCeeeecCCCCccccHHHHHHHHHHHhhhhcCCCCCCCcccceeeecCCCCChHH
Q 007609 174 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNRE 253 (596)
Q Consensus 174 ~~~~vGeeAl~~~~~~~~~l~~Pi~~G~in~~~~~s~~~~~~dle~Iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~ 253 (596)
++++||++|...+ ..+.+++||++|.+. ||+++|.||+|+|++.|+++++++ +|+++++++.+..
T Consensus 50 ~~~~vG~~a~~~~--~~~~~~~Pi~~G~i~---------d~d~~e~i~~~~~~~~L~~~~~~~----~vvit~p~~~~~~ 114 (375)
T 2fxu_A 50 KDSYVGDEAQSKR--GILTLKYPIEHGIIT---------NWDDMEKIWHHTFYNELRVAPEEH----PTLLTEAPLNPKA 114 (375)
T ss_dssp -CCEEHHHHHHHT--TSEEEECSEETTEEC---------CHHHHHHHHHHHHHTTSCCCGGGS----CEEEEECTTCCHH
T ss_pred CCeEechhHhhcC--cccceeccccCCccc---------CHHHHHHHHHHHHHHhcCCCCcCC----cEEEEeCCCCcHH
Confidence 3578999998874 569999999999998 999999999999988899988776 5888888877766
Q ss_pred HHH-HHHHHHHhcCCCeEEEeehhhHHhhhcCCceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHHHHHHH
Q 007609 254 IKE-MLSIVLRDLRFASAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQR 332 (596)
Q Consensus 254 vr~-l~eilfe~~gf~~v~~~~esvlA~fgaG~stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l~~lL~ 332 (596)
.|+ +++++||.||+++++++++++||+||+|.+++||||+|+++|+|+||+||+++.++..++++||+++|++|.++|.
T Consensus 115 ~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~ 194 (375)
T 2fxu_A 115 NREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 194 (375)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHH
Confidence 665 9999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCCCCCcccccccccccHHHHHHHHHhceeccCCccccceeeecccCCCCCC-CceeeeeeecCCCCCCCCCcccCCCC
Q 007609 333 HHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPG-SHKTRLIALNVPPMGLFYPKLLVPDV 411 (596)
Q Consensus 333 ~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~-~~k~~~~~~~~aP~~lf~p~i~~~e~ 411 (596)
.++. ++....+...+++||+++|++..+.... ..... ...+ ...+.
T Consensus 195 ~~~~-------~~~~~~~~~~~e~iK~~~~~v~~~~~~e---~~~~~--~~~~~~~~~~--------------------- 241 (375)
T 2fxu_A 195 ERGY-------SFVTTAEREIVRDIKEKLCYVALDFENE---MATAA--SSSSLEKSYE--------------------- 241 (375)
T ss_dssp HHTC-------CCCSHHHHHHHHHHHHHHCCCCSSHHHH---HHHHH--HCSTTCEEEE---------------------
T ss_pred hcCC-------CCCcHHHHHHHHHHHHHHHhhcccHHHH---HHhhc--ccCccCeEEE---------------------
Confidence 7642 3333457889999999999997531100 00000 0000 00010
Q ss_pred CCCCCCCCCCCccccccCCccccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCccccCCHHHHHHHHHHhcCChh
Q 007609 412 YPPPPRSWFNDYEDMLEDTWHTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRID 489 (596)
Q Consensus 412 ~~~p~~~~~~d~ed~~~d~~~~~~~-~r~~~~E~lf-p~~~g~~~~~~~~~~~~~~~~~~~~~~L~~aI~~sI~~~~~~d 489 (596)
++|+..+.++ +|+.++|.|| |...+ .+..+|+++|.++|.+| +.|
T Consensus 242 ---------------lpdg~~i~i~~erf~~~E~lf~p~~~~-----------------~~~~~i~~~i~~~i~~~-~~~ 288 (375)
T 2fxu_A 242 ---------------LPDGQVITIGNERFRCPETLFQPSFIG-----------------MESAGIHETTYNSIMKC-DID 288 (375)
T ss_dssp ---------------CTTSCEEEESTHHHHHHHTTTCGGGGT-----------------CCSCCHHHHHHHHHHTS-CHH
T ss_pred ---------------CCCCCEEEEChhheechHhhCCCccCC-----------------CCCCCHHHHHHHHHHhC-CHH
Confidence 1122223333 5778889898 55443 34679999999999999 899
Q ss_pred HHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeeeccCCcccceeeHHHHHh
Q 007609 490 LQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGILDFGRDAWIHREDWIR 569 (596)
Q Consensus 490 ~r~~L~~nIvLvGG~S~i~Gf~~RL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~L~sf~~~wItr~EYee 569 (596)
+|++|++||+|+||+|++|||.+||++||..+.|...++ +|.. ..+|.+++|+|||++|++++|+++||||+||+|
T Consensus 289 ~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v---~v~~-~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e 364 (375)
T 2fxu_A 289 IRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKI---KIIA-PPERKYSVWIGGSILASLSTFQQMWITKQEYDE 364 (375)
T ss_dssp HHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCC---CEEC-CTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHH
T ss_pred HHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeE---EEEc-CCCCCccEEcchHHhhCcccHhhceeeHHHHhh
Confidence 999999999999999999999999999999998876543 4443 358999999999999999999999999999999
Q ss_pred cCcceeeeccC
Q 007609 570 NGIHIGSGRKY 580 (596)
Q Consensus 570 ~G~~il~rk~~ 580 (596)
+|+++++|||+
T Consensus 365 ~G~~~~~~k~~ 375 (375)
T 2fxu_A 365 AGPSIVHRKCF 375 (375)
T ss_dssp HCGGGGC----
T ss_pred hChHHHhhhcc
Confidence 99999999996
No 6
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=1.2e-60 Score=513.20 Aligned_cols=320 Identities=21% Similarity=0.371 Sum_probs=133.5
Q ss_pred cceEEccccccCCCCCCcEEEcceecCeeeecCCCCccccHHHHHHHHHHHh-hhhcCCCCCCCcccceeeecCCCCChH
Q 007609 174 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWIL-TEKLHIPRSERNLYSAILVLPESFDNR 252 (596)
Q Consensus 174 ~~~~vGeeAl~~~~~~~~~l~~Pi~~G~in~~~~~s~~~~~~dle~Iw~~~l-~~~L~i~~~d~~~y~~VLvip~~~~~~ 252 (596)
++++||++|...+ +.+.+++||++|.+. ||++++.||+|+| ++.|+++++++ +|+++++++++.
T Consensus 53 ~~~~vG~ea~~~~--~~~~~~~Pi~~G~i~---------dwd~~e~i~~~~~~~~~L~~~~~~~----~vllt~p~~~~~ 117 (394)
T 1k8k_B 53 KDLMVGDEASELR--SMLEVNYPMENGIVR---------NWDDMKHLWDYTFGPEKLNIDTRNC----KILLTEPPMNPT 117 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEEChHHHhcC--CCceeeccccCCEEe---------cHHHHHHHHHHHhcccccCcCCCCC----cEEEEECCCCCH
Confidence 3578999998874 578999999999998 9999999999999 88999988877 688888888777
Q ss_pred HHHH-HHHHHHHhcCCCeEEEeehhhHHhhhcCCceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHHHHHH
Q 007609 253 EIKE-MLSIVLRDLRFASAVVHQEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQ 331 (596)
Q Consensus 253 ~vr~-l~eilfe~~gf~~v~~~~esvlA~fgaG~stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l~~lL 331 (596)
..|+ +++++||.|||++++++.+++||+||+|+++|||||+|+++|+|+||+||+++.++..++++||+++|++|.++|
T Consensus 118 ~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l 197 (394)
T 1k8k_B 118 KNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLL 197 (394)
T ss_dssp ------------------------------------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHH
Confidence 6665 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcccccccccccHHHHHHHHHhceeccCCccccceeeecccCCCCCCCceeeeeeecCCCCCCCCCcccCCCC
Q 007609 332 RHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLIALNVPPMGLFYPKLLVPDV 411 (596)
Q Consensus 332 ~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~~k~~~~~~~~aP~~lf~p~i~~~e~ 411 (596)
+.++. ++....+++.+++||+++|+++.+.... ...... .......+.
T Consensus 198 ~~~~~-------~~~~~~~~~~ae~iK~~~~~v~~d~~~~---~~~~~~-~~~~~~~~~--------------------- 245 (394)
T 1k8k_B 198 LLRGY-------AFNHSADFETVRMIKEKLCYVGYNIEQE---QKLALE-TTVLVESYT--------------------- 245 (394)
T ss_dssp HHTTC-------CCCTTTTHHHHHHHHHHHCCCCSSHHHH---HHHHHH-CSTTCEEEE---------------------
T ss_pred HhcCC-------CCCcHHHHHHHHHHHHhheeEecCHHHH---HHhhcc-CCcCceEEE---------------------
Confidence 87642 3444568899999999999997531100 000000 000000010
Q ss_pred CCCCCCCCCCCccccccCCccccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCccccCCHHHHHHHHHHhcCChh
Q 007609 412 YPPPPRSWFNDYEDMLEDTWHTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRID 489 (596)
Q Consensus 412 ~~~p~~~~~~d~ed~~~d~~~~~~~-~r~~~~E~lf-p~~~g~~~~~~~~~~~~~~~~~~~~~~L~~aI~~sI~~~~~~d 489 (596)
++|+..+.++ +|+.++|.|| |...+ .+..+|+++|.++|.+| +.|
T Consensus 246 ---------------lpdg~~i~i~~erf~~~E~Lf~p~~~~-----------------~~~~~i~~~i~~~i~~~-~~d 292 (394)
T 1k8k_B 246 ---------------LPDGRIIKVGGERFEAPEALFQPHLIN-----------------VEGVGVAELLFNTIQAA-DID 292 (394)
T ss_dssp ---------------CTTSCEEEECTHHHHTGGGGTCGGGGT-----------------CCSCCHHHHHHHHHHHS-CTT
T ss_pred ---------------CCCCCEEEECchhhcChHhhCCchhcc-----------------CCCCCHHHHHHHHHHhC-CHH
Confidence 1122223333 5888899999 55443 35679999999999999 899
Q ss_pred HHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhC-----------CCCCCcceEEEcCCCCCCceeEEeceeeeeccCCcc
Q 007609 490 LQRKLFCSIQLIGGVALTGGLIPAVEERVLHAI-----------PSNEAIDMVEVLQSRTNPTYVSWKGGAVLGILDFGR 558 (596)
Q Consensus 490 ~r~~L~~nIvLvGG~S~i~Gf~~RL~~eL~~~~-----------p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~L~sf~ 558 (596)
+|++|++||+|+||+|++|||.+||++||..+. |... +|+|.. +.+|.+++|+||||+|+|++|+
T Consensus 293 ~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~---~v~v~~-~~~~~~~~w~Ggsilasl~~f~ 368 (394)
T 1k8k_B 293 TRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKF---KIRIED-PPRRKHMVFLGGAVLADIMKDK 368 (394)
T ss_dssp THHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCC---CC---------------------------
T ss_pred HHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCce---EEEEec-CCCcceeEEhhhHHhhCCcCCc
Confidence 999999999999999999999999999999876 5544 356653 3578999999999999999999
Q ss_pred -cceeeHHHHHhcCcceeee
Q 007609 559 -DAWIHREDWIRNGIHIGSG 577 (596)
Q Consensus 559 -~~wItr~EYee~G~~il~r 577 (596)
++||||+||+|+|+++++|
T Consensus 369 ~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 369 DNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp --------------------
T ss_pred cceeecHHHHhhhCHHHHHh
Confidence 9999999999999999987
No 7
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=8.3e-56 Score=478.95 Aligned_cols=327 Identities=19% Similarity=0.294 Sum_probs=258.4
Q ss_pred cceEEccccccCCCCCCcEEEcceecCeeeecCCCCccccHHHHHHHHHHHhhhhcCCCCCCCcccceeeecCCCCChHH
Q 007609 174 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNRE 253 (596)
Q Consensus 174 ~~~~vGeeAl~~~~~~~~~l~~Pi~~G~in~~~~~s~~~~~~dle~Iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~ 253 (596)
.+++||++|...+ ++.+++||++|.+. ||++++.||+|+|.+.|+++++++ +|+++++++.+..
T Consensus 58 ~~~~vG~~a~~~~---~~~~~~pi~~G~i~---------d~d~~e~i~~~~~~~~L~~~~~~~----~vvit~p~~~~~~ 121 (418)
T 1k8k_A 58 LDFFIGDEAIEKP---TYATKWPIRHGIVE---------DWDLMERFMEQVIFKYLRAEPEDH----YFLLTEPPLNTPE 121 (418)
T ss_dssp GCEEEGGGGTSCT---TSEEECCEETTEES---------CHHHHHHHHHHHHHTTTCCCGGGC----CEEEEECTTCCHH
T ss_pred cCeEEChHHHhcC---CCEEeccccCCEEC---------CHHHHHHHHHHHHHhccCCCCCCC----cEEEEeCCCCCHH
Confidence 3589999999874 59999999999998 999999999999988899988766 5777777776666
Q ss_pred HH-HHHHHHHHhcCCCeEEEeehhhHHhhh---------cCCceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHH
Q 007609 254 IK-EMLSIVLRDLRFASAVVHQEGLAAVFG---------NGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDI 323 (596)
Q Consensus 254 vr-~l~eilfe~~gf~~v~~~~esvlA~fg---------aG~stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~di 323 (596)
.| .+.+++||.+||++++++.+++||+|+ .|. +|||||+|+++|+|+||++|+++.++..++++||+++
T Consensus 122 ~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~l 200 (418)
T 1k8k_A 122 NREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDI 200 (418)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHH
Confidence 55 499999999999999999999999999 566 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcccccccccccHHHHHHHHHhceeccCCccccceeeecccCCCCCC-CceeeeeeecCCCCCCC
Q 007609 324 SRCLLWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPG-SHKTRLIALNVPPMGLF 402 (596)
Q Consensus 324 t~~l~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~-~~k~~~~~~~~aP~~lf 402 (596)
|++|.++|..++. ++....+++.++++|+++|++..+.... ...+.. .+.. ...+.+. .+.
T Consensus 201 t~~l~~~l~~~~~-------~~~~~~~~~~~e~iK~~~~~v~~~~~~e---~~~~~~-~~~~~~~~~~lp------d~~- 262 (418)
T 1k8k_A 201 TYFIQQLLRDREV-------GIPPEQSLETAKAVKERYSYVCPDLVKE---FNKYDT-DGSKWIKQYTGI------NAI- 262 (418)
T ss_dssp HHHHHHHHHTTCC-------CCCGGGHHHHHHHHHHHHCCCCSCHHHH---HHHHHH-SGGGTCEEEEEE------CTT-
T ss_pred HHHHHHHHHhcCC-------CCCCHHHHHHHHHHHHhhchhcccHHHH---HHhhcc-cccccceeEECC------CCC-
Confidence 9999999976542 2333467899999999999997531100 000000 0000 0011111 000
Q ss_pred CCcccCCCCCCCCCCCCCCCccccccCCccccCC-CCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCccc-cCCHHHHHH
Q 007609 403 YPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTDFP-RRSDISDNFY-PGINVGLPMWESYPVLTTKPKKEE-KIGLAEAVT 479 (596)
Q Consensus 403 ~p~i~~~e~~~~p~~~~~~d~ed~~~d~~~~~~~-~r~~~~E~lf-p~~~g~~~~~~~~~~~~~~~~~~~-~~~L~~aI~ 479 (596)
.. ....+.++ +|+.++|.|| |...+ .+ ..+|+++|.
T Consensus 263 -----~~-------------------~~~~i~l~~erf~~~E~lF~P~~~~-----------------~~~~~~i~~~i~ 301 (418)
T 1k8k_A 263 -----SK-------------------KEFSIDVGYERFLGPEIFFHPEFAN-----------------PDFTQPISEVVD 301 (418)
T ss_dssp -----TC-------------------CEEEEEECTHHHHHHHTTTCGGGTC-----------------TTCCCCHHHHHH
T ss_pred -----CC-------------------cccEEEeChHHhhCcHhhCCCccCC-----------------CCCCCCHHHHHH
Confidence 00 00012222 5777888898 55433 12 368999999
Q ss_pred HHHHhcCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhC----------------CCCCCcceEEEcCCCCCCcee
Q 007609 480 SSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAI----------------PSNEAIDMVEVLQSRTNPTYV 543 (596)
Q Consensus 480 ~sI~~~~~~d~r~~L~~nIvLvGG~S~i~Gf~~RL~~eL~~~~----------------p~~~~~~~V~v~~~~~dp~~~ 543 (596)
++|.+| +.|+|+++++||+|+||+|++|||.+||++||..+. |... +|+|.. +.+|+++
T Consensus 302 ~si~~~-~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~---~v~v~~-~~~~~~~ 376 (418)
T 1k8k_A 302 EVIQNC-PIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPI---DVQVIT-HHMQRYA 376 (418)
T ss_dssp HHHHHS-CGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCC---CCCEEC-CTTCTTH
T ss_pred HHHHcC-CHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCce---eEEEeC-CCccccc
Confidence 999999 899999999999999999999999999999998875 3333 356664 3589999
Q ss_pred EEeceeeeeccCCcccceeeHHHHHhcCcceeeecc-CC
Q 007609 544 SWKGGAVLGILDFGRDAWIHREDWIRNGIHIGSGRK-YK 581 (596)
Q Consensus 544 aW~GgSIla~L~sf~~~wItr~EYee~G~~il~rk~-~~ 581 (596)
+|+||||||+|++|+++||||+||+|+|+++++||| |+
T Consensus 377 ~w~Ggsilasl~~f~~~~itk~ey~e~G~~~~~~~~~f~ 415 (418)
T 1k8k_A 377 VWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFG 415 (418)
T ss_dssp HHHHHHHHTTSHHHHHHSEEHHHHHHHCGGGGGCCCCCS
T ss_pred eeHhHHHHHcCccHhheEEEHHHHhhhCHHHHhhhcccc
Confidence 999999999999999999999999999999999966 54
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.94 E-value=1.5e-25 Score=235.57 Aligned_cols=278 Identities=16% Similarity=0.182 Sum_probs=191.9
Q ss_pred eEEccccccCCCC--CCcEEEcceecCeeeecCCCCccccHHHHHHHHHHHhhhhcCCC-CCCCcccceeeecCCCCChH
Q 007609 176 FICGEEALRVSPT--EPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIP-RSERNLYSAILVLPESFDNR 252 (596)
Q Consensus 176 ~~vGeeAl~~~~~--~~~~l~~Pi~~G~in~~~~~s~~~~~~dle~Iw~~~l~~~L~i~-~~d~~~y~~VLvip~~~~~~ 252 (596)
++||++|.+.... .+..+.+|+++|.+. +|+.++.+|.+++.+..... ..+. ..|+-+|..|+..
T Consensus 42 ~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~---------~~~~~~~i~~~~l~~~~~~~~~~~~---~~vitvP~~~~~~ 109 (344)
T 1jce_A 42 LKVGLEAKNMIGKTPATIKAIRPMRDGVIA---------DYTVALVMLRYFINKAKGGMNLFKP---RVVIGVPIGITDV 109 (344)
T ss_dssp EEESHHHHTTTTCCCTTEEEECCEETTEES---------SHHHHHHHHHHHHHHHHTSCCSCCC---EEEEEECTTCCHH
T ss_pred EEEcHHHHHhcccCCCCeEEEecCCCCeeC---------ChHHHHHHHHHHHHHHhhccccCCC---eEEEEECCCCCHH
Confidence 5688888665322 457778999999987 89999999999995433322 2222 2444455566665
Q ss_pred HHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCC-----ceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHH
Q 007609 253 EIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL-----STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCL 327 (596)
Q Consensus 253 ~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~-----stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l 327 (596)
+.+.+.+ +++..|++.+.++.+++||++++|. .+.+|||+|+++|.|+++..|.++. ...+++||+++|+.|
T Consensus 110 ~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~--~~~~~lGG~~id~~l 186 (344)
T 1jce_A 110 ERRAILD-AGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVT--WESIRIAGDEMDEAI 186 (344)
T ss_dssp HHHHHHH-HHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEe--eCCCCccChhHHHHH
Confidence 5434555 6899999999999999999999997 5899999999999999999998774 457899999999999
Q ss_pred HHHHHhcCCCCCcccccccccccHHHHHHHHHhceeccCCccccceeeecccCCCCCCC-ceeeeeeecCCCCCCCCCcc
Q 007609 328 LWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGS-HKTRLIALNVPPMGLFYPKL 406 (596)
Q Consensus 328 ~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~-~k~~~~~~~~aP~~lf~p~i 406 (596)
.+.+..+- .+ ..+...+|++|+++|+....................++. ....+..
T Consensus 187 ~~~l~~~~--------~~--~~~~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~------------- 243 (344)
T 1jce_A 187 VQYVRETY--------RV--AIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKG------------- 243 (344)
T ss_dssp HHHHHHHH--------CE--ECCHHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEH-------------
T ss_pred HHHHHHHh--------Cc--ccCHHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeH-------------
Confidence 98876431 11 235678999999999865421000000000000000000 0000000
Q ss_pred cCCCCCCCCCCCCCCCccccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCccccCCHHHHHHHHHHhcC
Q 007609 407 LVPDVYPPPPRSWFNDYEDMLEDTWHTDFPRRSDISDNFYPGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTG 486 (596)
Q Consensus 407 ~~~e~~~~p~~~~~~d~ed~~~d~~~~~~~~r~~~~E~lfp~~~g~~~~~~~~~~~~~~~~~~~~~~L~~aI~~sI~~~~ 486 (596)
+++ +.+|. .....+.++|.++|.++
T Consensus 244 ------------------------------~~~---~~~~~---------------------~~~~~i~~~i~~~l~~~- 268 (344)
T 1jce_A 244 ------------------------------GEV---REALR---------------------SVVVAIVESVRTTLEKT- 268 (344)
T ss_dssp ------------------------------HHH---HHHTH---------------------HHHHHHHHHHHHHHHTS-
T ss_pred ------------------------------HHH---HHHHH---------------------HHHHHHHHHHHHHHHhC-
Confidence 000 00110 01235888999999998
Q ss_pred ChhHHHHHh-cCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeeec-cCCcc
Q 007609 487 RIDLQRKLF-CSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGI-LDFGR 558 (596)
Q Consensus 487 ~~d~r~~L~-~nIvLvGG~S~i~Gf~~RL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~-L~sf~ 558 (596)
+.+++++++ ++|+|+||+|++|||.++|++++.. +|.+. .+|.+++|+||++++. +++|+
T Consensus 269 ~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~---------~v~~~---~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 269 PPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGI---------SVIRS---EEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp CHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSS---------CEEEC---SSTTTHHHHHHHHGGGCHHHHT
T ss_pred CchhccchhhCcEEEECccccchHHHHHHHHHHCC---------Ccccc---CChHHHHHHHHHHHHhChHHHH
Confidence 788888888 7999999999999999999999852 24443 4788999999999998 46663
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.66 E-value=2.4e-16 Score=159.67 Aligned_cols=214 Identities=19% Similarity=0.196 Sum_probs=155.4
Q ss_pred EcceecCeeeecCCCCccccHHHHHHHHHHHhhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEe
Q 007609 194 HRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVH 273 (596)
Q Consensus 194 ~~Pi~~G~in~~~~~s~~~~~~dle~Iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~ 273 (596)
..|+++|.+. +|+.++.+|++++.........+.. ..++-+|..+. ...++.++.+++.+|++...+.
T Consensus 59 ~~~l~~g~i~---------d~~~~~~~l~~~~~~~~~~~~~~~~--~~v~tvp~~~~-~~~~~~~~~~~~~~g~~~~~i~ 126 (272)
T 3h1q_A 59 ASVVKDGLVV---------DYIGAIQIVRELKAKVERLLGSELF--QAATAIPPGTV-GRNAEACGHVVAGAGLELVTLV 126 (272)
T ss_dssp CCCCBTTBCT---------THHHHHHHHHHHHHHHHHHSSSCCC--EEEEECCSCC----CTTHHHHHHHHTTCEEEEEE
T ss_pred ccccCCCEEE---------cHHHHHHHHHHHHHHHHHhcCCccC--eEEEEcCCCCC-HHHHHHHHHHHHHcCCeeeecc
Confidence 4689999987 9999999999998643222111221 13333443333 3334577788999999999999
Q ss_pred ehhhHHhhhcCCceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHHHHHHHhcCCCCCcccccccccccHHH
Q 007609 274 QEGLAAVFGNGLSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTKAMDLLM 353 (596)
Q Consensus 274 ~esvlA~fgaG~stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l~~lL~~~~~~p~~~~~~l~~~~d~~l 353 (596)
.++.|+++++|...++|||+|++.|.++++.+|.++. ...+++||.++|+.+.+.+. .+.+.
T Consensus 127 ~e~~A~a~~~~~~~~~viDiGggst~~~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~l~----------------~~~~~ 188 (272)
T 3h1q_A 127 DEPVAAARALGINDGIVVDIGGGTTGIAVIEKGKITA--TFDEPTGGTHLSLVLAGSYK----------------IPFEE 188 (272)
T ss_dssp CHHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEEEE--ECCBSCCHHHHHHHHHHHHT----------------CCHHH
T ss_pred cHHHHHHHHHcCCCEEEEEECCCcEEEEEEECCEEEE--EecCCCcHHHHHHHHHHHhC----------------CCHHH
Confidence 9999999999999999999999999999999999874 36789999999999987763 23467
Q ss_pred HHHHHHhceeccCCccccceeeecccCCCCCCCceeeeeeecCCCCCCCCCcccCCCCCCCCCCCCCCCccccccCCccc
Q 007609 354 LNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHT 433 (596)
Q Consensus 354 ~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~~k~~~~~~~~aP~~lf~p~i~~~e~~~~p~~~~~~d~ed~~~d~~~~ 433 (596)
++++|+++|.-.. +.+ ++
T Consensus 189 ae~~k~~~~~~~~------------------------~~~------------~~-------------------------- 206 (272)
T 3h1q_A 189 AETIKKDFSRHRE------------------------IMR------------VV-------------------------- 206 (272)
T ss_dssp HHHHHHSSTTHHH------------------------HHH------------HH--------------------------
T ss_pred HHHHHHhcCCHHH------------------------HHH------------HH--------------------------
Confidence 8999988751000 000 00
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCccccCCHHHHHHHHHHhcCChhHHHHHhcCeEEEcCCCCcCChHHH
Q 007609 434 DFPRRSDISDNFYPGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPA 513 (596)
Q Consensus 434 ~~~~r~~~~E~lfp~~~g~~~~~~~~~~~~~~~~~~~~~~L~~aI~~sI~~~~~~d~r~~L~~nIvLvGG~S~i~Gf~~R 513 (596)
. .-...+.+.|.+++.++ + ...+|+|+||+|++|||.++
T Consensus 207 -------------~---------------------~~~~~i~~~i~~~l~~~-~------~~~~ivL~GG~a~~~~l~~~ 245 (272)
T 3h1q_A 207 -------------R---------------------PVIEKMALIVKEVIKNY-D------QTLPVYVVGGTAYLTGFSEE 245 (272)
T ss_dssp -------------H---------------------HHHHHHHHHHHHHTTTS-C------SSCCEEEESGGGGSTTHHHH
T ss_pred -------------H---------------------HHHHHHHHHHHHHHHhc-C------CCCEEEEECCccchhhHHHH
Confidence 0 00124667777777776 3 13599999999999999999
Q ss_pred HHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeee
Q 007609 514 VEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLG 552 (596)
Q Consensus 514 L~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla 552 (596)
|++++.. +|.+ +.+|.+++|+||+++|
T Consensus 246 l~~~l~~---------~v~~---~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 246 FSRFLGK---------EVQV---PIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHSS---------CCBC---CSSGGGHHHHHHHTTC
T ss_pred HHHHhCC---------Cccc---cCChHHHHHHHHHhcC
Confidence 9999842 1222 3588999999998875
No 10
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.45 E-value=3.4e-14 Score=150.93 Aligned_cols=224 Identities=16% Similarity=0.139 Sum_probs=139.8
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCc------eEEEEEeCCCceEEEEeeCC------ee
Q 007609 241 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLS------TACVVNMGAQVTSVICVEDG------VA 308 (596)
Q Consensus 241 ~VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~s------tg~VVDiGa~~TsV~pV~dG------~~ 308 (596)
.|+.+|..|+..+.+.+.+ +++..|++.+.++.+++||++++|.. +.+|||+|+++|.|+.+..| ..
T Consensus 138 ~vitvP~~~~~~~r~~~~~-a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~ 216 (383)
T 1dkg_D 138 AVITVPAYFNDAQRQATKD-AGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTF 216 (383)
T ss_dssp EEECBCTTCCHHHHHHHHH-HHHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCC
T ss_pred EEEEECCCCCHHHHHHHHH-HHHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeE
Confidence 4666777777665444555 57899999999999999999988764 68999999999999988744 32
Q ss_pred c-ccCcEEecchHHHHHHHHHHHHHhcCCCCCcccccccc-----cccHHHHHHHHHhceeccCCccccceeeecccCCC
Q 007609 309 L-PNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTK-----AMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGM 382 (596)
Q Consensus 309 l-~~s~~~l~~GG~dit~~l~~lL~~~~~~p~~~~~~l~~-----~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~ 382 (596)
. ..+....++||+++|+.|.+++...-. .-...++.. ..-+..+|++|+.+|......+... ..+. .
T Consensus 217 ~v~~~~~~~~lGG~~id~~l~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~---~~~~--~ 289 (383)
T 1dkg_D 217 EVLATNGDTHLGGEDFDSRLINYLVEEFK--KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLP---YITA--D 289 (383)
T ss_dssp EEEEEEEESSCSHHHHHHHHHHHHHHHHH--HHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEE---EEEE--E
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHH--HHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEe---cccc--c
Confidence 1 112345789999999999887654300 000001110 0124678999999886532111100 0000 0
Q ss_pred CCCCc--eeeeeeecCCCCCCCCCcccCCCCCCCCCCCCCCCccccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 007609 383 PPGSH--KTRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTDFPRRSDISDNFYPGINVGLPMWESYP 460 (596)
Q Consensus 383 p~~~~--k~~~~~~~~aP~~lf~p~i~~~e~~~~p~~~~~~d~ed~~~d~~~~~~~~r~~~~E~lfp~~~g~~~~~~~~~ 460 (596)
+++.. ...+. |... |.+|.
T Consensus 290 ~~G~~~~~~~it---------------------------------------------~~~~-~~~~~------------- 310 (383)
T 1dkg_D 290 ATGPKHMNIKVT---------------------------------------------RAKL-ESLVE------------- 310 (383)
T ss_dssp TTEEEEEEEEEE---------------------------------------------HHHH-HHHSH-------------
T ss_pred CCCCeeEEEEEe---------------------------------------------HHHH-HHHHH-------------
Confidence 11100 00000 0000 00110
Q ss_pred ccCCCCCccccCCHHHHHHHHHHhcCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCC
Q 007609 461 VLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNP 540 (596)
Q Consensus 461 ~~~~~~~~~~~~~L~~aI~~sI~~~~~~d~r~~L~~nIvLvGG~S~i~Gf~~RL~~eL~~~~p~~~~~~~V~v~~~~~dp 540 (596)
.....+.++|.++|..+ +. ......+|+|+||+|++||+.++|++++.. ++. ...+|
T Consensus 311 --------~~~~~i~~~i~~~l~~~-~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~---------~v~---~~~~p 367 (383)
T 1dkg_D 311 --------DLVNRSIELLKVALQDA-GL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK---------EPR---KDVNP 367 (383)
T ss_dssp --------HHHHHHHHHHHHHHHTT-TC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSS---------CCB---CSSCT
T ss_pred --------HHHHHHHHHHHHHHHHc-CC--CHhhCCEEEEecCccccHHHHHHHHHHhCC---------CCC---CCcCh
Confidence 01125777888888887 32 334568999999999999999999999852 111 13578
Q ss_pred ceeEEeceeeeecc
Q 007609 541 TYVSWKGGAVLGIL 554 (596)
Q Consensus 541 ~~~aW~GgSIla~L 554 (596)
..++|+||+++|.+
T Consensus 368 ~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 368 DEAVAIGAAVQGGV 381 (383)
T ss_dssp TTHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999999875
No 11
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.45 E-value=8.6e-14 Score=153.76 Aligned_cols=224 Identities=17% Similarity=0.188 Sum_probs=139.7
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCC-----ceEEEEEeCCCceEEEEee--CCee-cccC
Q 007609 241 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL-----STACVVNMGAQVTSVICVE--DGVA-LPNT 312 (596)
Q Consensus 241 ~VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~-----stg~VVDiGa~~TsV~pV~--dG~~-l~~s 312 (596)
+|+-+|..|+..+.+.+.+ +++..|++.+.++.++.||++++|. .+.+|||+|+++|.|+.+. +|.. +..+
T Consensus 112 ~VitvPa~~~~~qr~a~~~-a~~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~ 190 (509)
T 2v7y_A 112 AVITVPAYFNDAQRQATKD-AGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKAT 190 (509)
T ss_dssp EEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEe
Confidence 5666777777666444555 5689999999999999999999987 4789999999999999776 4643 2233
Q ss_pred cEEecchHHHHHHHHHHHHHhcCCCCCcccccccc-----cccHHHHHHHHHhceeccCCccccceeeecccCCCCCCC-
Q 007609 313 EKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTK-----AMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGS- 386 (596)
Q Consensus 313 ~~~l~~GG~dit~~l~~lL~~~~~~p~~~~~~l~~-----~~d~~l~e~lKe~~c~v~~~~~~~~~~~~~~~~~~p~~~- 386 (596)
....++||+++|+.|.+.+...-.- .+ ..++.. ..-+..+|++|+.+|......+... ..+. .+++.
T Consensus 191 ~g~~~lGG~d~d~~l~~~l~~~~~~-~~-~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~---~~~~--~~~G~~ 263 (509)
T 2v7y_A 191 AGDNHLGGDDFDQVIIDYLVNQFKQ-EH-GIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLP---FISA--NENGPL 263 (509)
T ss_dssp EEETTCSHHHHHHHHHHHHHHHHHH-HH-SCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEE---EEEE--ETTEEE
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHHH-Hh-CCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEe---cccc--CCCCCe
Confidence 3457899999999998776542000 00 011111 0124678899999876432111100 0000 00000
Q ss_pred -ceeeeeeecCCCCCCCCCcccCCCCCCCCCCCCCCCccccccCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCCC
Q 007609 387 -HKTRLIALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYEDMLEDTWHTDFPRRSDISDNFYPGINVGLPMWESYPVLTTK 465 (596)
Q Consensus 387 -~k~~~~~~~~aP~~lf~p~i~~~e~~~~p~~~~~~d~ed~~~d~~~~~~~~r~~~~E~lfp~~~g~~~~~~~~~~~~~~ 465 (596)
....+. |... |.++..
T Consensus 264 ~~~~~it---------------------------------------------r~~f-e~l~~~----------------- 280 (509)
T 2v7y_A 264 HLEMTLT---------------------------------------------RAKF-EELSAH----------------- 280 (509)
T ss_dssp EEEEEEE---------------------------------------------HHHH-HHHTHH-----------------
T ss_pred eEEEEEE---------------------------------------------HHHH-HHHHHH-----------------
Confidence 000000 0000 001100
Q ss_pred CCccccCCHHHHHHHHHHhcCChhHHHHHhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEE
Q 007609 466 PKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSW 545 (596)
Q Consensus 466 ~~~~~~~~L~~aI~~sI~~~~~~d~r~~L~~nIvLvGG~S~i~Gf~~RL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW 545 (596)
-...+.+.|.++|..+ .. .....++|+|+||+|++||+.++|++++... +. ...+|..++|
T Consensus 281 ----~~~~i~~~i~~~L~~a-~~--~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~---------~~---~~~~p~~aVa 341 (509)
T 2v7y_A 281 ----LVERTMGPVRQALQDA-GL--TPADIDKVILVGGSTRIPAVQEAIKRELGKE---------PH---KGVNPDEVVA 341 (509)
T ss_dssp ----HHHTTHHHHHHHHHHH-TC--CGGGCSEEEEESGGGGCHHHHHHHHHHHSSC---------CB---CCSCTTTHHH
T ss_pred ----HHHHHHHHHHHHHHHc-CC--ChhHCcEEEEECCcccChHHHHHHHHHhCCC---------cC---cCCCchhhhH
Confidence 0124667788888776 32 3345689999999999999999999988421 11 1357889999
Q ss_pred eceeeeecc
Q 007609 546 KGGAVLGIL 554 (596)
Q Consensus 546 ~GgSIla~L 554 (596)
.||+++|..
T Consensus 342 ~Gaa~~a~~ 350 (509)
T 2v7y_A 342 IGAAIQGGV 350 (509)
T ss_dssp HHHHHHHHH
T ss_pred hhHHHHHHH
Confidence 999999863
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.34 E-value=3.1e-13 Score=143.77 Aligned_cols=91 Identities=20% Similarity=0.233 Sum_probs=69.0
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCc------eEEEEEeCCCceEEEEee--CCeeccc-
Q 007609 241 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLS------TACVVNMGAQVTSVICVE--DGVALPN- 311 (596)
Q Consensus 241 ~VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~s------tg~VVDiGa~~TsV~pV~--dG~~l~~- 311 (596)
.|+-+|..|+..+. +.+.-+++..|++.+.++.|+.||++++|.. +.+|||+|+++|.|+.+. +|..-..
T Consensus 156 ~vitvP~~~~~~~r-~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~ 234 (394)
T 3qfu_A 156 AVVTVPAYFNDAQR-QATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQA 234 (394)
T ss_dssp EEEEECTTCCHHHH-HHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEE
T ss_pred EEEEECCCCCHHHH-HHHHHHHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEE
Confidence 56667777877654 4444455899999999999999999999864 349999999999887774 4543222
Q ss_pred CcEEecchHHHHHHHHHHHHH
Q 007609 312 TEKTLPFGGEDISRCLLWTQR 332 (596)
Q Consensus 312 s~~~l~~GG~dit~~l~~lL~ 332 (596)
+....++||.++|+.|.+.+.
T Consensus 235 ~~~~~~lGG~~~d~~l~~~l~ 255 (394)
T 3qfu_A 235 TSGDTHLGGEDFDYKIVRQLI 255 (394)
T ss_dssp EEEETTCSHHHHHHHHHHHHH
T ss_pred EcCCCCCChHHHHHHHHHHHH
Confidence 233479999999999987664
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.26 E-value=2.3e-12 Score=137.82 Aligned_cols=91 Identities=19% Similarity=0.281 Sum_probs=70.3
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCce---------EEEEEeCCCceEEEEee--CCee-
Q 007609 241 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLST---------ACVVNMGAQVTSVICVE--DGVA- 308 (596)
Q Consensus 241 ~VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~st---------g~VVDiGa~~TsV~pV~--dG~~- 308 (596)
.|+-+|..|+..+. +.+.-+++..|++.+.++.|+.||++++|... .+|||+|+++|.|+.+. +|..
T Consensus 161 ~vitvPa~~~~~~r-~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~ 239 (404)
T 3i33_A 161 AVITVPAYFNDSQR-QATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFE 239 (404)
T ss_dssp EEEEECTTCCHHHH-HHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred EEEEECCCCCHHHH-HHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEE
Confidence 57777778877664 44455588999999999999999999987543 49999999999998774 4442
Q ss_pred cccCcEEecchHHHHHHHHHHHHH
Q 007609 309 LPNTEKTLPFGGEDISRCLLWTQR 332 (596)
Q Consensus 309 l~~s~~~l~~GG~dit~~l~~lL~ 332 (596)
+..+....++||.++++.|.+.+.
T Consensus 240 v~~~~~~~~lGG~~~d~~l~~~l~ 263 (404)
T 3i33_A 240 VKSTAGDTHLGGEDFDNRMVSHLA 263 (404)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHH
Confidence 222334579999999999987663
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.05 E-value=3.9e-10 Score=125.66 Aligned_cols=91 Identities=18% Similarity=0.247 Sum_probs=72.2
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCC-------ceEEEEEeCCCceEEEEee--CCee-cc
Q 007609 241 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL-------STACVVNMGAQVTSVICVE--DGVA-LP 310 (596)
Q Consensus 241 ~VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~-------stg~VVDiGa~~TsV~pV~--dG~~-l~ 310 (596)
+|+-+|..|+..+. +.+.-+++..|++.+.++.|+.||++++|. .+.+|+|+|+++|.|+.+. +|.. +.
T Consensus 142 ~VitVPa~f~~~qr-~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~ 220 (554)
T 1yuw_A 142 AVVTVPAYFNDSQR-QATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVK 220 (554)
T ss_dssp EEEEECTTCCHHHH-HHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEE
T ss_pred EEEEECCCCCHHHH-HHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEE
Confidence 57777878887664 444446789999999999999999998874 4689999999999999887 7754 22
Q ss_pred cCcEEecchHHHHHHHHHHHHH
Q 007609 311 NTEKTLPFGGEDISRCLLWTQR 332 (596)
Q Consensus 311 ~s~~~l~~GG~dit~~l~~lL~ 332 (596)
.+.....+||+++++.|.+.+.
T Consensus 221 a~~g~~~lGG~d~d~~l~~~l~ 242 (554)
T 1yuw_A 221 STAGDTHLGGEDFDNRMVNHFI 242 (554)
T ss_dssp EEEEETTCSHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHH
Confidence 3344578999999999887654
No 15
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.99 E-value=3.4e-09 Score=112.01 Aligned_cols=90 Identities=20% Similarity=0.347 Sum_probs=71.2
Q ss_pred HHHHHHhcCCCeEEEeehhhHHhhhcCC-------ceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHHHHH
Q 007609 258 LSIVLRDLRFASAVVHQEGLAAVFGNGL-------STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWT 330 (596)
Q Consensus 258 ~eilfe~~gf~~v~~~~esvlA~fgaG~-------stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l~~l 330 (596)
+.-+++..|+.-..+..+++||+.++|. ...+|||+|+++|.|+.+.+|.++. ...+++||+++|+.+.+-
T Consensus 156 ~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~i~~~ 233 (377)
T 2ych_A 156 VLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEAIARS 233 (377)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHH
T ss_pred HHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHHHHHH
Confidence 3445688999999999999999988752 3469999999999999999998874 357899999999998762
Q ss_pred HHhcCCCCCcccccccccccHHHHHHHHHhceecc
Q 007609 331 QRHHQTWPQIRTDILTKAMDLLMLNRIKESYCEIK 365 (596)
Q Consensus 331 L~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~v~ 365 (596)
+ + .++..+|++|+++++..
T Consensus 234 ~---~-------------~~~~~aE~~K~~~~~~~ 252 (377)
T 2ych_A 234 F---N-------------LDLLAAEEVKRTYGMAT 252 (377)
T ss_dssp T---T-------------CCHHHHHHHHHHTC---
T ss_pred h---C-------------CCHHHHHHHHhhccccc
Confidence 2 1 23567999999988654
No 16
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=98.96 E-value=5e-10 Score=126.10 Aligned_cols=139 Identities=18% Similarity=0.157 Sum_probs=89.9
Q ss_pred HHHHHHHHhhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCc------eEEE
Q 007609 217 LYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLS------TACV 290 (596)
Q Consensus 217 le~Iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~s------tg~V 290 (596)
|..+++.+- ..|+.+..+ +|+-+|..|+..+ |+.+.-+.+..|+..+.++.|+.||++++|.. ..+|
T Consensus 120 L~~l~~~ae-~~l~~~v~~-----~VitVPa~f~d~q-r~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV 192 (605)
T 2kho_A 120 LKKMKKTAE-DYLGEPVTE-----AVITVPAYFNDAQ-RQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAV 192 (605)
T ss_dssp HHHHHHHHH-HHHCSCCCE-----EEEEECTTCCHHH-HHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEE
T ss_pred HHHHHHHHH-HHhCCCCcE-----EEEEECCCCCHHH-HHHHHHHHHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEE
Confidence 355555542 455533222 5777888888665 44444557889999999999999999988753 4799
Q ss_pred EEeCCCceEEEEee------CCee-cccCcEEecchHHHHHHHHHHHHHhcCCCCCcccccccc-c----ccHHHHHHHH
Q 007609 291 VNMGAQVTSVICVE------DGVA-LPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTK-A----MDLLMLNRIK 358 (596)
Q Consensus 291 VDiGa~~TsV~pV~------dG~~-l~~s~~~l~~GG~dit~~l~~lL~~~~~~p~~~~~~l~~-~----~d~~l~e~lK 358 (596)
+|+|+++|.|+.+. +|.. +..+....++||+++++.|.+.+...-.- .+ ..++.. . .-+..+|++|
T Consensus 193 ~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~-~~-~~~~~~~~~~~~~L~~~aE~~K 270 (605)
T 2kho_A 193 YDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKK-DQ-GIDLRNDPLAMQRLKEAAEKAK 270 (605)
T ss_dssp EEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHH-HH-SCCSTTCHHHHHHHHHHHHHHH
T ss_pred EECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHHH-Hh-CCCcccCHHHHHHHHHHHHHHH
Confidence 99999999999886 4543 12223446899999999998766432000 00 001110 0 0135688899
Q ss_pred Hhceec
Q 007609 359 ESYCEI 364 (596)
Q Consensus 359 e~~c~v 364 (596)
+.++..
T Consensus 271 ~~ls~~ 276 (605)
T 2kho_A 271 IELSSA 276 (605)
T ss_dssp HHTTSS
T ss_pred HHcCCC
Confidence 887653
No 17
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.95 E-value=1.8e-09 Score=122.79 Aligned_cols=91 Identities=14% Similarity=0.174 Sum_probs=71.0
Q ss_pred eeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCC------------ceEEEEEeCCCceEEEEee--CC
Q 007609 241 AILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL------------STACVVNMGAQVTSVICVE--DG 306 (596)
Q Consensus 241 ~VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~------------stg~VVDiGa~~TsV~pV~--dG 306 (596)
+|+-+|..|+..+. +.+.-+.+..|+..+.++.++.||++++|. .+.+|+|+|+++|.|+.+. +|
T Consensus 141 ~VITVPa~f~~~qR-~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g 219 (675)
T 3d2f_A 141 VCIAVPPWYTEEQR-YNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKG 219 (675)
T ss_dssp EEEEECTTCCHHHH-HHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETT
T ss_pred EEEEECCCCCHHHH-HHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCC
Confidence 57777888887664 444446688999999999999999987753 3589999999999999886 67
Q ss_pred ee-cccCcEEecchHHHHHHHHHHHHH
Q 007609 307 VA-LPNTEKTLPFGGEDISRCLLWTQR 332 (596)
Q Consensus 307 ~~-l~~s~~~l~~GG~dit~~l~~lL~ 332 (596)
.. +..+.....+||+++++.|.+.+.
T Consensus 220 ~~~V~a~~gd~~lGG~d~D~~l~~~l~ 246 (675)
T 3d2f_A 220 QLKVLGTACDKHFGGRDFDLAITEHFA 246 (675)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCccHHHHHHHHHHHHH
Confidence 54 222333578999999999987664
No 18
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.87 E-value=3.5e-09 Score=113.33 Aligned_cols=111 Identities=17% Similarity=0.206 Sum_probs=79.4
Q ss_pred HHHHHHHHHhhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCCc--------e
Q 007609 216 DLYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGLS--------T 287 (596)
Q Consensus 216 dle~Iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~s--------t 287 (596)
.|+.+++++- ..++.+..+ .|+-+|..|+..+ ++.+.-+.+..|+..+.++.|+.||+++++.. .
T Consensus 134 ~L~~l~~~a~-~~~~~~~~~-----~vitvPa~~~~~~-r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~ 206 (409)
T 4gni_A 134 YLRRLVGAAS-EYLGKKVTS-----AVITIPTNFTEKQ-KAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKI 206 (409)
T ss_dssp HHHHHHHHHH-HHHTSCCCE-----EEEEECTTCCHHH-HHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEE
T ss_pred HHHHHHHHHH-HHhCCCCCe-----EEEEECCCCCHHH-HHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCE
Confidence 3466666553 445533222 5788888898765 34555567888999999999999999999864 4
Q ss_pred EEEEEeCCCceEEEEe--eCCeec-ccCcEEecchHHHHHHHHHHHHHh
Q 007609 288 ACVVNMGAQVTSVICV--EDGVAL-PNTEKTLPFGGEDISRCLLWTQRH 333 (596)
Q Consensus 288 g~VVDiGa~~TsV~pV--~dG~~l-~~s~~~l~~GG~dit~~l~~lL~~ 333 (596)
.+|||+|+++|.|+-+ .+|..- ..+....++||.++|+.|.+.+..
T Consensus 207 vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~ 255 (409)
T 4gni_A 207 IVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSK 255 (409)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 8999999999999875 344321 112234799999999999877653
No 19
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.78 E-value=3.1e-08 Score=106.51 Aligned_cols=88 Identities=16% Similarity=0.154 Sum_probs=73.0
Q ss_pred HHHHHHhcCCCeEEEeehhhHHhhhcCCc-----eEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHHHHHHH
Q 007609 258 LSIVLRDLRFASAVVHQEGLAAVFGNGLS-----TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQR 332 (596)
Q Consensus 258 ~eilfe~~gf~~v~~~~esvlA~fgaG~s-----tg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l~~lL~ 332 (596)
+.-+++..|+.-..++.+++||+++++.. ..+|||+|+++|.|+-+.+|.+.. ...+++||+++|+.+...+.
T Consensus 173 ~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~GG~~it~dIa~~l~ 250 (419)
T 4a2a_A 173 FYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVGMKHVIKDVSAVLD 250 (419)
T ss_dssp HHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCCHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccHHHHHHHHHHHHHC
Confidence 34457889999999999999999988752 589999999999999999998874 35789999999999886542
Q ss_pred hcCCCCCcccccccccccHHHHHHHHHhcee
Q 007609 333 HHQTWPQIRTDILTKAMDLLMLNRIKESYCE 363 (596)
Q Consensus 333 ~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~ 363 (596)
.+++.+|++|.++..
T Consensus 251 ----------------~~~~~AE~iK~~~g~ 265 (419)
T 4a2a_A 251 ----------------TSFEESERLIITHGN 265 (419)
T ss_dssp ----------------CCHHHHHHHHHHHCC
T ss_pred ----------------CCHHHHHHHHHHhcc
Confidence 245679999988754
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.67 E-value=7e-08 Score=108.58 Aligned_cols=109 Identities=21% Similarity=0.235 Sum_probs=77.8
Q ss_pred HHHHHHHHhhhhcCCCCCCCcccceeeecCCCCChHHHHHHHHHHHHhcCCCeEEEeehhhHHhhhcCC------ceEEE
Q 007609 217 LYAIWDWILTEKLHIPRSERNLYSAILVLPESFDNREIKEMLSIVLRDLRFASAVVHQEGLAAVFGNGL------STACV 290 (596)
Q Consensus 217 le~Iw~~~l~~~L~i~~~d~~~y~~VLvip~~~~~~~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG~------stg~V 290 (596)
|..+.+.+- ..|+.+..+ +|+-+|..|+..+ |+.+.-+.+..|+..+.++.|+.||++++|. ..-+|
T Consensus 120 L~~lk~~ae-~~lg~~v~~-----~VITVPa~f~~~q-r~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV 192 (605)
T 4b9q_A 120 LKKMKKTAE-DYLGEPVTE-----AVITVPAYFNDAQ-RQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAV 192 (605)
T ss_dssp HHHHHHHHH-HHHTSCCCE-----EEEEECTTCCHHH-HHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEE
T ss_pred HHHHHHHHH-HHhCCCCCe-----EEEEECCCCCHHH-HHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEE
Confidence 344444443 456654332 5777888888665 4566666788999999999999999988874 35799
Q ss_pred EEeCCCceEEEEeeCCe------e-cccCcEEecchHHHHHHHHHHHHH
Q 007609 291 VNMGAQVTSVICVEDGV------A-LPNTEKTLPFGGEDISRCLLWTQR 332 (596)
Q Consensus 291 VDiGa~~TsV~pV~dG~------~-l~~s~~~l~~GG~dit~~l~~lL~ 332 (596)
+|+|++++.|+.+.-+- . +..+.....+||+++++.|.+.+.
T Consensus 193 ~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~ 241 (605)
T 4b9q_A 193 YDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLV 241 (605)
T ss_dssp EEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred EECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHH
Confidence 99999999999886432 1 111223467899999999987664
No 21
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=98.42 E-value=4.2e-07 Score=95.20 Aligned_cols=137 Identities=15% Similarity=0.169 Sum_probs=93.3
Q ss_pred cceEEccccccCCCCCCcEEEcceecCeeeecCCCCccccHHHHHHHHHHHhhhhcC-CCCCCCccccee--eecCCCCC
Q 007609 174 REFICGEEALRVSPTEPYCIHRPIRRGHLNISQHYPMQQVLEDLYAIWDWILTEKLH-IPRSERNLYSAI--LVLPESFD 250 (596)
Q Consensus 174 ~~~~vGeeAl~~~~~~~~~l~~Pi~~G~in~~~~~s~~~~~~dle~Iw~~~l~~~L~-i~~~d~~~y~~V--Lvip~~~~ 250 (596)
+.|+||++|. +|++.|.+. + +..+.++.+++.+... -.... .+.| +-+|..+.
T Consensus 78 ~~~~vG~~A~-----------~~l~~~~~~---------~-~~~~~ll~~~l~~~~~~~~~~~---~~vvL~i~vP~~~~ 133 (346)
T 2fsj_A 78 GKYASGNNIR-----------VPQGDGRLA---------S-KEAFPLIAAALWESGIHNDGSP---VDLVIGSGTPLGTF 133 (346)
T ss_dssp GGGCCSSCCB-----------CCSSTTCTT---------S-TTTHHHHHHHHHHHCCCC---C---EEEEEEEEECGGGH
T ss_pred cEEEEcccee-----------cccCCCccc---------C-hhHHHHHHHHHHHhhhccCCCc---eEEEEcccCCHHHH
Confidence 5688999987 678888776 4 5567777777754321 11111 1234 44444444
Q ss_pred hHHHHHHHHHHHHh-------------cCCCeEEEeehhhHHhhhc--CC------ceEEEEEeCCCceEEEEee--CCe
Q 007609 251 NREIKEMLSIVLRD-------------LRFASAVVHQEGLAAVFGN--GL------STACVVNMGAQVTSVICVE--DGV 307 (596)
Q Consensus 251 ~~~vr~l~eilfe~-------------~gf~~v~~~~esvlA~fga--G~------stg~VVDiGa~~TsV~pV~--dG~ 307 (596)
..+.+.+.+.+... +++..+.+++|+.+|++++ +. .+.+|||||+++|.|+-+. +|.
T Consensus 134 ~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~ 213 (346)
T 2fsj_A 134 DLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME 213 (346)
T ss_dssp HHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE
T ss_pred HHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE
Confidence 44433455554332 2357799999999999985 31 3459999999999999998 887
Q ss_pred ecccCcEEecchHHHHHHHHHHHHHhc
Q 007609 308 ALPNTEKTLPFGGEDISRCLLWTQRHH 334 (596)
Q Consensus 308 ~l~~s~~~l~~GG~dit~~l~~lL~~~ 334 (596)
.+..+...+++||+++++.+.+.++++
T Consensus 214 ~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 214 PVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp ECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred EEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 655556788999999999998877643
No 22
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=97.68 E-value=0.00032 Score=75.94 Aligned_cols=93 Identities=15% Similarity=0.180 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHhcCCCeEEEeehhhHHhhhcC----Cc-eEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHH
Q 007609 253 EIKEMLSIVLRDLRFASAVVHQEGLAAVFGNG----LS-TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCL 327 (596)
Q Consensus 253 ~vr~l~eilfe~~gf~~v~~~~esvlA~fgaG----~s-tg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l 327 (596)
.++.+.+.+=+.++++-=.=.-++.+|.+|+= +. -.|+||+|+++|+++-+.+|..+. ...+++||+++|.-+
T Consensus 369 ~m~NI~~cVer~~gL~veV~g~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~--a~~ip~gG~~VT~DI 446 (610)
T 2d0o_A 369 QMAMIAREIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDII--ATHLAGAGDMVTMII 446 (610)
T ss_dssp CHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEE--EEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHhccCCcceeccccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHH
Confidence 34445555444446521111167777777762 22 479999999999999999988774 467999999999998
Q ss_pred HHHHHhcCCCCCcccccccccccHHHHHHHHHhcee
Q 007609 328 LWTQRHHQTWPQIRTDILTKAMDLLMLNRIKESYCE 363 (596)
Q Consensus 328 ~~lL~~~~~~p~~~~~~l~~~~d~~l~e~lKe~~c~ 363 (596)
..-|.. -|+..+|+||. |..
T Consensus 447 A~~Lgt---------------~d~~~AErIK~-YG~ 466 (610)
T 2d0o_A 447 ARELGL---------------EDRYLAEEIKK-YPL 466 (610)
T ss_dssp HHHHTC---------------CCHHHHHHHHH-SCE
T ss_pred HHHhCC---------------CCHHHHHHhcc-cCc
Confidence 876631 24788999998 643
No 23
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=97.65 E-value=0.00015 Score=78.61 Aligned_cols=72 Identities=21% Similarity=0.172 Sum_probs=57.1
Q ss_pred ehhhHHhhhcC----Cc-eEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHHHHHHHhcCCCCCccccccccc
Q 007609 274 QEGLAAVFGNG----LS-TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDILTKA 348 (596)
Q Consensus 274 ~esvlA~fgaG----~s-tg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l~~lL~~~~~~p~~~~~~l~~~ 348 (596)
-++.+|.+|+= +. -.|+||+|+++|+++-+.+|..+. ...+++||+++|.-+..-|..
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~--a~~ip~gG~~VT~DIA~~Lg~--------------- 454 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT--AVHLAGAGNMVSLLIKTELGL--------------- 454 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEE--EEEEECCHHHHHHHHHHHHTC---------------
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCC---------------
Confidence 67777777762 22 479999999999999999988774 467999999999998876631
Q ss_pred ccHHHHHHHHHhcee
Q 007609 349 MDLLMLNRIKESYCE 363 (596)
Q Consensus 349 ~d~~l~e~lKe~~c~ 363 (596)
-|+..+|+||. |..
T Consensus 455 ~d~~~AErIK~-YG~ 468 (607)
T 1nbw_A 455 EDLSLAEAIKK-YPL 468 (607)
T ss_dssp SCHHHHHHHHH-SCE
T ss_pred CCHHHHHHhcc-cCc
Confidence 24788999998 643
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=97.20 E-value=0.00051 Score=71.90 Aligned_cols=68 Identities=7% Similarity=0.102 Sum_probs=59.1
Q ss_pred CCeEEEeehhhHHhhhcCC-----------ceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHHHHHHHhc
Q 007609 267 FASAVVHQEGLAAVFGNGL-----------STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRHH 334 (596)
Q Consensus 267 f~~v~~~~esvlA~fgaG~-----------stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l~~lL~~~ 334 (596)
+..|.+++|+++|+|+++. ...+|||||+.+|.++.+.+|.+.......+++||..+++.+.+.++..
T Consensus 154 I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 154 VKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 4789999999999999863 3579999999999999998899988878889999999999999888654
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=97.18 E-value=0.00039 Score=71.54 Aligned_cols=71 Identities=10% Similarity=0.122 Sum_probs=58.6
Q ss_pred HhcCCCeEEEeehhhHHhhhcC-----CceEEEEEeCCCceEEEEeeCCee-cccCcEEecchHHHHHHHHHHHHHh
Q 007609 263 RDLRFASAVVHQEGLAAVFGNG-----LSTACVVNMGAQVTSVICVEDGVA-LPNTEKTLPFGGEDISRCLLWTQRH 333 (596)
Q Consensus 263 e~~gf~~v~~~~esvlA~fgaG-----~stg~VVDiGa~~TsV~pV~dG~~-l~~s~~~l~~GG~dit~~l~~lL~~ 333 (596)
+.++|..+.++.++++|+++.+ ....+|||||+++|.++.+.+|.. +..+...+++||+++++.+.+.+..
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~ 212 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSL 212 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTC
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHH
Confidence 3456788999999999999874 246899999999999999999876 4434467799999999999987754
No 26
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=96.82 E-value=0.0013 Score=68.14 Aligned_cols=67 Identities=13% Similarity=0.125 Sum_probs=57.8
Q ss_pred CCeEEEeehhhHHhhhcC----CceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHHHHHHHh
Q 007609 267 FASAVVHQEGLAAVFGNG----LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLLWTQRH 333 (596)
Q Consensus 267 f~~v~~~~esvlA~fgaG----~stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l~~lL~~ 333 (596)
+..|.+.+|++.|.|... ..+.+|||||+++|.++.+.+|.+.......+++||+++++.+.+.++.
T Consensus 149 I~~v~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 149 ITDITIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEEEEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EeEEEEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 467999999999999862 2467999999999999999999988776778999999999999876654
No 27
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=88.08 E-value=1.6 Score=44.36 Aligned_cols=70 Identities=20% Similarity=0.235 Sum_probs=48.9
Q ss_pred HHHHHHHHhcCCCeEEEeehh---hHHhhh----cC-CceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHH
Q 007609 256 EMLSIVLRDLRFASAVVHQEG---LAAVFG----NG-LSTACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCL 327 (596)
Q Consensus 256 ~l~eilfe~~gf~~v~~~~es---vlA~fg----aG-~stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l 327 (596)
++++.+-+..|++ +-++... .++..| .+ ...++|||||.++|.++-+.+|.+. ....+++|+-.+++.|
T Consensus 101 ~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 101 EFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNLTETF 177 (315)
T ss_dssp HHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHHHHHH
T ss_pred HHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHHHHHHHh
Confidence 4566666666764 4444422 222211 23 5579999999999999999988775 3568999999999876
Q ss_pred H
Q 007609 328 L 328 (596)
Q Consensus 328 ~ 328 (596)
.
T Consensus 178 ~ 178 (315)
T 1t6c_A 178 F 178 (315)
T ss_dssp C
T ss_pred c
Confidence 3
No 28
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=81.51 E-value=1.6 Score=44.42 Aligned_cols=40 Identities=13% Similarity=0.265 Sum_probs=34.8
Q ss_pred ceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHH
Q 007609 286 STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCL 327 (596)
Q Consensus 286 stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l 327 (596)
..++|||||.++|.++-+.+|.+. ....+++|.--+++.|
T Consensus 131 ~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~f 170 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQRLIDRF 170 (315)
T ss_dssp CCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHHHHHHS
T ss_pred CCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhHHHHHh
Confidence 569999999999999999998776 3578999998888765
No 29
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=78.99 E-value=1.6 Score=45.01 Aligned_cols=42 Identities=14% Similarity=0.200 Sum_probs=33.2
Q ss_pred ceEEEEEeCCCceEEEEeeC--Ceec--ccCcEEecchHHHHHHHH
Q 007609 286 STACVVNMGAQVTSVICVED--GVAL--PNTEKTLPFGGEDISRCL 327 (596)
Q Consensus 286 stg~VVDiGa~~TsV~pV~d--G~~l--~~s~~~l~~GG~dit~~l 327 (596)
..++|||||.++|.++-+.+ +.+. ......+++|+..+|+.+
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~ 191 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERH 191 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHT
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHh
Confidence 46999999999999998877 3321 013578999999999876
No 30
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=78.76 E-value=1.4 Score=44.98 Aligned_cols=25 Identities=24% Similarity=0.501 Sum_probs=23.3
Q ss_pred ceEEEEEeCCCceEEEEeeCCeecc
Q 007609 286 STACVVNMGAQVTSVICVEDGVALP 310 (596)
Q Consensus 286 stg~VVDiGa~~TsV~pV~dG~~l~ 310 (596)
.++++||||..+|.|+|+.+|.++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999975
No 31
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=73.85 E-value=4.4 Score=44.07 Aligned_cols=40 Identities=13% Similarity=0.206 Sum_probs=34.9
Q ss_pred eEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHHHH
Q 007609 287 TACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRCLL 328 (596)
Q Consensus 287 tg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~l~ 328 (596)
.++|||||.++|.++-..+|.+. ....+++|.--+|+.|.
T Consensus 138 ~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrlte~f~ 177 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSFAQLYF 177 (513)
T ss_dssp CEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHHHHS
T ss_pred CEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHHHHHHc
Confidence 69999999999999999888875 35689999999988763
No 32
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=73.39 E-value=0.58 Score=46.27 Aligned_cols=63 Identities=14% Similarity=0.138 Sum_probs=42.4
Q ss_pred eEEEeehhhHHhhhcCC---ceEEEEEeCCCceEEEEee-CCeeccc-CcEEecchHHHHHHHHHHHH
Q 007609 269 SAVVHQEGLAAVFGNGL---STACVVNMGAQVTSVICVE-DGVALPN-TEKTLPFGGEDISRCLLWTQ 331 (596)
Q Consensus 269 ~v~~~~esvlA~fgaG~---stg~VVDiGa~~TsV~pV~-dG~~l~~-s~~~l~~GG~dit~~l~~lL 331 (596)
.+..+++..+.++|+.. ..-.|+|+|.+.++++-+. +|....- .-..+.-||.+..+.+.+.|
T Consensus 73 ~~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~l 140 (276)
T 4ehu_A 73 ADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKII 140 (276)
T ss_dssp CSEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHHH
T ss_pred CCcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHHh
Confidence 35678888888888764 3468999999999998884 4654211 11234567666666666555
No 33
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=70.88 E-value=6.6 Score=42.58 Aligned_cols=39 Identities=23% Similarity=0.321 Sum_probs=34.0
Q ss_pred ceEEEEEeCCCceEEEEeeCCeecccCcEEecchHHHHHHH
Q 007609 286 STACVVNMGAQVTSVICVEDGVALPNTEKTLPFGGEDISRC 326 (596)
Q Consensus 286 stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~~GG~dit~~ 326 (596)
..++|||||.++|.++-+.+|.+. ....+++|.--+++.
T Consensus 140 ~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 140 PDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRLSEQ 178 (508)
T ss_dssp CEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHHHHH
T ss_pred CCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEehhhc
Confidence 468999999999999999999876 467899999888874
No 34
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=50.49 E-value=13 Score=38.14 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=25.9
Q ss_pred ceEEEEEeCCCceEEEEeeC--CeecccCcEEecchH
Q 007609 286 STACVVNMGAQVTSVICVED--GVALPNTEKTLPFGG 320 (596)
Q Consensus 286 stg~VVDiGa~~TsV~pV~d--G~~l~~s~~~l~~GG 320 (596)
.+++|||||.++|.|+-..+ +.+.......+++||
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~ 176 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYG 176 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETT
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECC
Confidence 47999999999999998754 333333346778777
No 35
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=41.01 E-value=6.2 Score=39.53 Aligned_cols=73 Identities=14% Similarity=0.011 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHhcCChhHHHHHhcCeEEEcC-CCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceee
Q 007609 472 IGLAEAVTSSILSTGRIDLQRKLFCSIQLIGG-VALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAV 550 (596)
Q Consensus 472 ~~L~~aI~~sI~~~~~~d~r~~L~~nIvLvGG-~S~i~Gf~~RL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSI 550 (596)
.+|..+|.+.|...+-.-.++.=..+|+++|| .+..|++.++|++.+... . .++.++ .++++..=+||++
T Consensus 214 asl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-~-----~~~~~p---~~~~~~gAlGAaL 284 (287)
T 2ews_A 214 AAVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVEDYTVLR-G-----CKPYYV---ENGAFSGAIGALY 284 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHHT-T-----CEEEEC---TTGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhhC-C-----ceEEEC---CCccHHHHHHHHH
Confidence 35666666655433111112223357999999 899999999999876542 1 134443 4678888888887
Q ss_pred eec
Q 007609 551 LGI 553 (596)
Q Consensus 551 la~ 553 (596)
+++
T Consensus 285 ~~~ 287 (287)
T 2ews_A 285 LEK 287 (287)
T ss_dssp TCC
T ss_pred hCC
Confidence 653
No 36
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=33.71 E-value=5.9 Score=40.52 Aligned_cols=31 Identities=13% Similarity=0.126 Sum_probs=23.6
Q ss_pred EEEEcCCCceeeeeccCCCCCCccceeeEEec
Q 007609 20 LVVINPGSANIRIGLAQHDTPLNIPHCIARRT 51 (596)
Q Consensus 20 ~iVihpGS~~lriG~asd~~P~~ip~~iAr~~ 51 (596)
+|-|=.|..|.++-. .+-.-...|++||...
T Consensus 23 ~igiDlG~~~tkv~~-~~g~~~~~PSvva~~~ 53 (346)
T 2fsj_A 23 VVGLDVGYGDTKVIG-VDGKRIIFPSRWAVTE 53 (346)
T ss_dssp EEEEEECSSEEEEEC-GGGCEEEEESCEEEEC
T ss_pred EEEEecCCcceeEEe-cCCCEEEecceeeecc
Confidence 578899999999864 3334557999999764
No 37
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=33.28 E-value=14 Score=37.42 Aligned_cols=46 Identities=17% Similarity=0.303 Sum_probs=30.3
Q ss_pred HhcCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeeec
Q 007609 494 LFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGI 553 (596)
Q Consensus 494 L~~nIvLvGG~S~i~Gf~~RL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~ 553 (596)
+...|+|+||||++ +.+.|++++ +. ++.+. .+|.++.=+|.-.++.
T Consensus 278 ~~~~IvltGGGA~l--~~~~l~~~~----~~-----~v~v~---~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 278 QLDSLIFIGGTTQK--LKEQISKTY----PN-----NSIIT---NNSQWTTCEGLYKVAV 323 (329)
T ss_dssp SCSEEEEESTTHHH--HHHHHHHHS----TT-----CEECC---SSGGGHHHHHHHHHHH
T ss_pred HccEEEEECChHHH--HHHHHHHHc----CC-----CCEec---CCChhhHHHHHHHHHh
Confidence 46889999999998 456666553 31 24544 3677777777655543
No 38
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=32.85 E-value=4.2 Score=41.96 Aligned_cols=45 Identities=18% Similarity=0.116 Sum_probs=29.8
Q ss_pred HHhcCeEEEcCCCCcCC--hHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeeec
Q 007609 493 KLFCSIQLIGGVALTGG--LIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLGI 553 (596)
Q Consensus 493 ~L~~nIvLvGG~S~i~G--f~~RL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla~ 553 (596)
+.+..|+|+||||.++| +.+.|++++ |. . .+|+++.=+|..+++.
T Consensus 289 ~~~~~Ivl~GGGa~l~~~~l~~~i~~~~----~~---------~---~~p~~anA~G~~~~~~ 335 (355)
T 3js6_A 289 NSIDRIIVTGGGANIHFDSLSHYYSDVF----EK---------A---DDSQFSNVRGYEKLGE 335 (355)
T ss_dssp TSCSEEEEESTTHHHHHHHHHHHSSSCE----EC---------C---SSGGGHHHHHHHHHHH
T ss_pred hhccEEEEECcchhcchhhHHHHHHHHC----CC---------C---CCcHHHHHHHHHHHHH
Confidence 34578999999998876 554444322 11 1 4778888888766654
No 39
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=32.66 E-value=15 Score=37.86 Aligned_cols=74 Identities=11% Similarity=0.031 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHhcCChhHHHHHhcCeEEEcC-CCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceee
Q 007609 472 IGLAEAVTSSILSTGRIDLQRKLFCSIQLIGG-VALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAV 550 (596)
Q Consensus 472 ~~L~~aI~~sI~~~~~~d~r~~L~~nIvLvGG-~S~i~Gf~~RL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSI 550 (596)
.+|..+|.+.|...+-.-.++.=..+|+++|| .+.-|++.+.|++.|.--..... ++.++ .++++..=+||++
T Consensus 283 ~gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~---~~~~~---~~~~y~GAlGAaL 356 (360)
T 2i7n_A 283 RATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQL---KALFL---EHEGYFGAVGALL 356 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSC---CEEEE---TTTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCe---eEEEc---CCccHHHHHHHHH
Confidence 46777777766544111124444468999999 99999999999999864222111 34444 3577777777765
Q ss_pred e
Q 007609 551 L 551 (596)
Q Consensus 551 l 551 (596)
+
T Consensus 357 ~ 357 (360)
T 2i7n_A 357 E 357 (360)
T ss_dssp H
T ss_pred H
Confidence 4
No 40
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=31.62 E-value=7.4 Score=39.11 Aligned_cols=46 Identities=22% Similarity=0.264 Sum_probs=29.3
Q ss_pred cCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeeee
Q 007609 496 CSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVLG 552 (596)
Q Consensus 496 ~nIvLvGG~S~i~Gf~~RL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIla 552 (596)
..|+|+||+|.+ +.+.|++ .++... .++.+. .+|++++=+|+.+++
T Consensus 274 ~~vvl~GGga~l--l~~~l~~----~~~~~~--~~~~~~---~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 274 THVMVIGGGAEL--ICDAVKK----HTQIRD--ERFFKT---NNSQYDLVNGMYLIG 319 (320)
T ss_dssp CEEEEESTTHHH--HHHHHHH----TSCCCG--GGEECC---SCGGGHHHHHHHHHH
T ss_pred CeEEEECChHHH--HHHHHHH----HhCCCC--CceeeC---CCcHHHHHHHHHHhc
Confidence 679999999987 5544444 443210 023433 478888888877665
No 41
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=28.99 E-value=23 Score=37.14 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=24.8
Q ss_pred ceEEEEEeCCCceEEEEeeCCeecccCcEEec
Q 007609 286 STACVVNMGAQVTSVICVEDGVALPNTEKTLP 317 (596)
Q Consensus 286 stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~ 317 (596)
..-+|.-+|.+. |||.|.+|.++..+.--.+
T Consensus 210 ~~lIv~HLGnGa-Si~Ai~~GksVDTsMG~Tp 240 (415)
T 2e1z_A 210 SGLIVAHLGNGA-SICAVRNGQSVDTSMGMTP 240 (415)
T ss_dssp CEEEEEEESSSE-EEEEEETTEEEEESCCSST
T ss_pred cCEEEEEeCCch-hhhheeCCEEEecCCCCCC
Confidence 478999999987 9999999999976553333
No 42
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=26.13 E-value=26 Score=36.73 Aligned_cols=31 Identities=19% Similarity=0.331 Sum_probs=24.8
Q ss_pred ceEEEEEeCCCceEEEEeeCCeecccCcEEec
Q 007609 286 STACVVNMGAQVTSVICVEDGVALPNTEKTLP 317 (596)
Q Consensus 286 stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~ 317 (596)
..-+|.-+|.+. |+|.|.+|.++..+.--.+
T Consensus 202 ~~lIv~HLGnGa-Si~Ai~~GksVDTsMG~Tp 232 (408)
T 1g99_A 202 TKIITCHLGNGS-SITAVEGGKSVETSMGFTP 232 (408)
T ss_dssp CEEEEEEESSSE-EEEEEETTEEEEESCCSST
T ss_pred CCEEEEEeCCcc-chhheECCEEEEeCCCCCC
Confidence 468999999987 9999999999976553333
No 43
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=25.96 E-value=1.2e+02 Score=29.47 Aligned_cols=52 Identities=10% Similarity=0.138 Sum_probs=41.5
Q ss_pred HHHHHHHhcCCCeEEEeehhhHHhhhc-----CCceEEEEEeCCCceEEEEeeCCeeccc
Q 007609 257 MLSIVLRDLRFASAVVHQEGLAAVFGN-----GLSTACVVNMGAQVTSVICVEDGVALPN 311 (596)
Q Consensus 257 l~eilfe~~gf~~v~~~~esvlA~fga-----G~stg~VVDiGa~~TsV~pV~dG~~l~~ 311 (596)
+.+.| +.|++| |++.++.-++++|. +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 87 l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 87 WYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp HHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 55667 889998 99999999999883 5678999999986 45666778987753
No 44
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=25.51 E-value=25 Score=39.08 Aligned_cols=30 Identities=13% Similarity=0.202 Sum_probs=26.1
Q ss_pred cCCCCcccccccccccc-------ccccccceeeccc
Q 007609 98 NNSFPRKMGRVDAFNQQ-------NSRKDVAFSWTNV 127 (596)
Q Consensus 98 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 127 (596)
++.+||+.+++.+||++ .++|+.+++|++.
T Consensus 117 ~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~ 153 (655)
T 4am6_A 117 RKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFD 153 (655)
T ss_dssp CCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCC
T ss_pred CCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccC
Confidence 46889999999999997 5678999999975
No 45
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=23.19 E-value=11 Score=36.95 Aligned_cols=79 Identities=23% Similarity=0.304 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCChhHHHHHh--cCeEEEcCCCCcCChHHHHHHHHhhhCCCCCCcceEEEcCCCCCCceeEEeceeee
Q 007609 474 LAEAVTSSILSTGRIDLQRKLF--CSIQLIGGVALTGGLIPAVEERVLHAIPSNEAIDMVEVLQSRTNPTYVSWKGGAVL 551 (596)
Q Consensus 474 L~~aI~~sI~~~~~~d~r~~L~--~nIvLvGG~S~i~Gf~~RL~~eL~~~~p~~~~~~~V~v~~~~~dp~~~aW~GgSIl 551 (596)
|..+++++|... =.++-+.+- ..|+++||+++-+++.+.|++.|. .+|.+. ..+++..=+||+++
T Consensus 187 i~~av~e~Va~~-i~~~~~~~~~~~~i~~~GG~a~n~~~~~~~~~~lg---------~~v~~p---~~~~~~~AlGAAl~ 253 (270)
T 1hux_A 187 IIAGIHRSVASR-VIGLANRVGIVKDVVMTGGVAQNYGVRGALEEGLG---------VEIKTS---PLAQYNGALGAALY 253 (270)
T ss_dssp HHHHHHHHHHHH-HHHHHHTTCCCSSEEEESGGGGCHHHHHHHHHHHC---------SCEECC---GGGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHhcCCCCCeEEEeCccccCHHHHHHHHHHHC---------CCeEeC---CCcchHhHHHHHHH
Q ss_pred eccCCcccceeeHH
Q 007609 552 GILDFGRDAWIHRE 565 (596)
Q Consensus 552 a~L~sf~~~wItr~ 565 (596)
|....-...|-..+
T Consensus 254 A~~~~~~~~~~~~~ 267 (270)
T 1hux_A 254 AYKKAAKSAWSHPQ 267 (270)
T ss_dssp HHHHTTC-------
T ss_pred HHHhhhcccccCcc
No 46
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=23.02 E-value=1.2e+02 Score=29.57 Aligned_cols=48 Identities=8% Similarity=-0.001 Sum_probs=34.9
Q ss_pred EEEEEeCCCceEEEEeeCCeecccCcEEec-chHHHHHHHHHHHHHhcC
Q 007609 288 ACVVNMGAQVTSVICVEDGVALPNTEKTLP-FGGEDISRCLLWTQRHHQ 335 (596)
Q Consensus 288 g~VVDiGa~~TsV~pV~dG~~l~~s~~~l~-~GG~dit~~l~~lL~~~~ 335 (596)
-++||||.+.+....+.+|..+...+...+ ...+.+...+..++...+
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~ 52 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENN 52 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTT
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcC
Confidence 489999999999999988877765444433 446667667777776543
No 47
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=22.89 E-value=27 Score=36.49 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=24.9
Q ss_pred ceEEEEEeCCCceEEEEeeCCeecccCcEEec
Q 007609 286 STACVVNMGAQVTSVICVEDGVALPNTEKTLP 317 (596)
Q Consensus 286 stg~VVDiGa~~TsV~pV~dG~~l~~s~~~l~ 317 (596)
..-+|.-+|.+. |+|.|.+|.++..+.--.+
T Consensus 201 ~~lIv~HLGnGa-Si~Ai~~GksVDTsMG~Tp 231 (403)
T 2iir_A 201 LKIITCHIGNGA-SVAAVKYGKCVDTSMGFTP 231 (403)
T ss_dssp CEEEEEEESSSE-EEEEEETTEEEEESCCSST
T ss_pred CCEEEEEeCCCe-eeeeeECCEEEEeCCCCCC
Confidence 468999999987 9999999999976553333
No 48
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=22.50 E-value=67 Score=34.12 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=23.8
Q ss_pred ceEEEEEeCCCceEEEEeeCCee-cccCcEEecchH
Q 007609 286 STACVVNMGAQVTSVICVEDGVA-LPNTEKTLPFGG 320 (596)
Q Consensus 286 stg~VVDiGa~~TsV~pV~dG~~-l~~s~~~l~~GG 320 (596)
.+..|+|||.++|.|+-+.++.. -+.....+.++|
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~g 225 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYG 225 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSCCSCGGGEEEEEETT
T ss_pred CceEEEEcCCCceEEEeccCCccCCCCceEEEEeCC
Confidence 46789999999999999876642 223334444444
No 49
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=21.09 E-value=43 Score=27.89 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=18.5
Q ss_pred cCCcEEEEcCCCceeeeeccCCC
Q 007609 16 RGSNLVVINPGSANIRIGLAQHD 38 (596)
Q Consensus 16 ~~~~~iVihpGS~~lriG~asd~ 38 (596)
.|..++|.||+ +..||||..+.
T Consensus 10 ~~~p~v~l~~~-~~~rIGR~~~~ 31 (102)
T 3uv0_A 10 GGLPAILLKAD-TIYRIGRQKGL 31 (102)
T ss_dssp TTSCCEECCTT-CCEEEESSTTS
T ss_pred CCcccEEeecC-cEEEEcCCCCC
Confidence 47889999998 78999999554
No 50
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=20.57 E-value=2.1e+02 Score=27.91 Aligned_cols=47 Identities=15% Similarity=0.191 Sum_probs=35.6
Q ss_pred HhcCCCeEEEeehhhHHhhh-----c--CCceEEEEEeCCCceEEEEeeCCeeccc
Q 007609 263 RDLRFASAVVHQEGLAAVFG-----N--GLSTACVVNMGAQVTSVICVEDGVALPN 311 (596)
Q Consensus 263 e~~gf~~v~~~~esvlA~fg-----a--G~stg~VVDiGa~~TsV~pV~dG~~l~~ 311 (596)
+.|++| |++.++.-++++| . +..+.++|-+|.+ +-..-|.+|.++..
T Consensus 106 ~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 106 SALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEeec
Confidence 445777 8888888888765 2 4568999999987 55777789988753
Done!