Query 007612
Match_columns 596
No_of_seqs 210 out of 2431
Neff 8.7
Searched_HMMs 46136
Date Thu Mar 28 12:58:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007612.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007612hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 3.9E-45 8.5E-50 398.1 40.5 545 24-582 17-568 (571)
2 PRK10207 dipeptide/tripeptide 100.0 3.7E-34 8.1E-39 311.8 38.8 463 36-579 9-481 (489)
3 COG3104 PTR2 Dipeptide/tripept 100.0 1.8E-35 3.8E-40 307.0 25.5 461 34-577 14-490 (498)
4 TIGR00924 yjdL_sub1_fam amino 100.0 3E-33 6.6E-38 304.3 38.6 452 36-577 5-471 (475)
5 PRK09584 tppB putative tripept 100.0 2.3E-32 5E-37 299.1 39.6 458 36-579 16-484 (500)
6 PRK15462 dipeptide/tripeptide 100.0 4.6E-32 1E-36 291.6 39.3 449 38-566 6-469 (493)
7 TIGR01299 synapt_SV2 synaptic 100.0 8.4E-26 1.8E-30 254.0 32.9 153 61-243 186-351 (742)
8 TIGR00926 2A1704 Peptide:H+ sy 99.9 2.3E-24 4.9E-29 239.6 38.3 335 56-453 2-343 (654)
9 PRK05122 major facilitator sup 99.9 1.4E-24 3E-29 231.5 34.7 378 39-576 13-391 (399)
10 PRK03545 putative arabinose tr 99.9 2.1E-24 4.5E-29 229.5 33.1 374 39-575 7-381 (390)
11 TIGR00887 2A0109 phosphate:H+ 99.9 1.1E-24 2.4E-29 239.5 31.5 448 39-587 14-501 (502)
12 PRK10489 enterobactin exporter 99.9 1.4E-24 3E-29 233.0 30.3 392 45-587 21-412 (417)
13 PRK12382 putative transporter; 99.9 7.3E-24 1.6E-28 225.4 34.8 374 41-574 15-389 (392)
14 PRK14995 methyl viologen resis 99.9 5.8E-24 1.3E-28 233.2 34.2 399 40-533 5-413 (495)
15 PRK10077 xylE D-xylose transpo 99.9 6.6E-25 1.4E-29 239.7 26.5 434 40-589 11-472 (479)
16 PRK11663 regulatory protein Uh 99.9 2.4E-24 5.2E-29 232.4 30.6 167 42-239 24-190 (434)
17 PRK10504 putative transporter; 99.9 1.1E-23 2.3E-28 229.8 34.8 179 40-249 9-187 (471)
18 PRK10054 putative transporter; 99.9 3E-24 6.5E-29 228.8 29.5 175 38-243 4-178 (395)
19 COG2814 AraJ Arabinose efflux 99.9 1.9E-23 4.1E-28 215.5 34.2 380 37-577 9-389 (394)
20 PRK11646 multidrug resistance 99.9 9.1E-24 2E-28 225.4 33.1 168 44-242 13-180 (400)
21 PRK11551 putative 3-hydroxyphe 99.9 1.1E-23 2.3E-28 225.1 32.7 384 38-573 12-395 (406)
22 PRK09556 uhpT sugar phosphate 99.9 3.4E-24 7.3E-29 233.5 26.6 152 65-241 52-206 (467)
23 TIGR00879 SP MFS transporter, 99.9 1.4E-24 3E-29 235.4 22.4 144 75-245 69-215 (481)
24 TIGR00900 2A0121 H+ Antiporter 99.9 3.2E-23 7E-28 216.9 29.6 358 46-532 4-362 (365)
25 TIGR02332 HpaX 4-hydroxyphenyl 99.9 3.8E-23 8.2E-28 221.6 30.0 181 38-249 5-191 (412)
26 TIGR00893 2A0114 d-galactonate 99.9 4.4E-23 9.6E-28 217.6 30.0 154 63-246 15-168 (399)
27 PRK11273 glpT sn-glycerol-3-ph 99.9 7.1E-23 1.5E-27 222.2 32.0 154 63-243 50-204 (452)
28 PRK09705 cynX putative cyanate 99.9 8.5E-23 1.8E-27 217.5 32.0 367 51-580 19-387 (393)
29 PRK09874 drug efflux system pr 99.9 4.1E-23 8.8E-28 220.5 29.0 379 42-575 15-399 (408)
30 PRK10213 nepI ribonucleoside t 99.9 2.3E-22 5E-27 214.2 34.5 174 36-240 15-188 (394)
31 PRK10406 alpha-ketoglutarate t 99.9 1.7E-22 3.7E-27 217.9 33.3 174 42-238 23-210 (432)
32 TIGR00903 2A0129 major facilit 99.9 2E-22 4.4E-27 212.3 32.7 350 64-571 13-362 (368)
33 KOG0569 Permease of the major 99.9 5.2E-23 1.1E-27 218.4 26.6 403 80-590 63-470 (485)
34 PRK10642 proline/glycine betai 99.9 3.1E-22 6.6E-27 219.4 33.6 175 40-237 15-203 (490)
35 PRK09952 shikimate transporter 99.9 4.2E-22 9.2E-27 215.2 34.0 175 39-236 20-209 (438)
36 PRK15402 multidrug efflux syst 99.9 3.3E-22 7.2E-27 213.8 32.7 174 40-244 9-185 (406)
37 TIGR00892 2A0113 monocarboxyla 99.9 1E-22 2.2E-27 221.0 28.2 375 66-572 43-419 (455)
38 PRK12307 putative sialic acid 99.9 2.1E-22 4.6E-27 216.5 30.5 164 40-234 17-180 (426)
39 TIGR00891 2A0112 putative sial 99.9 1.4E-22 3.1E-27 215.4 28.8 172 37-239 8-181 (405)
40 TIGR00890 2A0111 Oxalate/Forma 99.9 1.1E-22 2.4E-27 213.7 27.5 365 49-567 11-375 (377)
41 TIGR00899 2A0120 sugar efflux 99.9 3.9E-22 8.5E-27 210.2 31.6 169 47-245 3-174 (375)
42 TIGR00711 efflux_EmrB drug res 99.9 1.9E-22 4.2E-27 220.4 29.7 402 43-532 4-409 (485)
43 COG2271 UhpC Sugar phosphate p 99.9 4.3E-23 9.3E-28 210.0 22.4 403 43-577 27-437 (448)
44 PLN00028 nitrate transmembrane 99.9 1.3E-22 2.8E-27 221.4 27.7 175 39-245 34-217 (476)
45 PRK03699 putative transporter; 99.9 7.3E-22 1.6E-26 210.4 32.8 173 38-241 4-177 (394)
46 TIGR00898 2A0119 cation transp 99.9 1E-22 2.2E-27 224.0 26.2 145 68-245 115-262 (505)
47 PRK10091 MFS transport protein 99.9 9.3E-22 2E-26 208.7 32.5 172 40-242 2-173 (382)
48 PF07690 MFS_1: Major Facilita 99.9 6.7E-23 1.4E-27 213.6 23.3 171 47-247 2-172 (352)
49 TIGR00894 2A0114euk Na(+)-depe 99.9 2.8E-22 6.1E-27 218.3 28.5 379 71-574 70-450 (465)
50 cd06174 MFS The Major Facilita 99.9 5.8E-22 1.3E-26 205.8 29.4 347 44-571 2-349 (352)
51 KOG0254 Predicted transporter 99.9 4.5E-22 9.6E-27 219.2 28.7 405 78-591 90-500 (513)
52 PRK03893 putative sialic acid 99.9 9.8E-22 2.1E-26 215.7 30.1 167 38-235 17-183 (496)
53 PRK03633 putative MFS family t 99.9 2.7E-21 5.8E-26 205.1 32.2 156 40-226 5-160 (381)
54 TIGR00897 2A0118 polyol permea 99.9 9.6E-21 2.1E-25 202.3 36.2 170 38-234 10-180 (402)
55 TIGR00710 efflux_Bcr_CflA drug 99.9 4.3E-21 9.3E-26 202.9 33.2 176 39-245 3-178 (385)
56 PRK15011 sugar efflux transpor 99.9 6.7E-21 1.4E-25 202.9 32.9 175 40-245 14-192 (393)
57 TIGR00895 2A0115 benzoate tran 99.9 2.1E-21 4.6E-26 205.6 28.5 174 40-244 16-189 (398)
58 PRK11195 lysophospholipid tran 99.9 6.5E-21 1.4E-25 203.0 32.1 163 42-239 4-166 (393)
59 PRK15403 multidrug efflux syst 99.9 2.2E-20 4.9E-25 200.1 35.4 147 68-244 42-188 (413)
60 PRK09528 lacY galactoside perm 99.9 3E-21 6.5E-26 207.4 28.6 394 41-576 10-405 (420)
61 TIGR00712 glpT glycerol-3-phos 99.9 1.2E-21 2.7E-26 211.6 25.7 180 41-248 27-207 (438)
62 PRK11652 emrD multidrug resist 99.9 1.5E-20 3.2E-25 200.2 32.2 172 38-240 5-176 (394)
63 KOG2532 Permease of the major 99.9 3.9E-21 8.5E-26 206.2 26.2 377 71-574 67-447 (466)
64 PRK15075 citrate-proton sympor 99.9 1.8E-20 4E-25 202.2 31.4 171 41-234 15-199 (434)
65 PRK11043 putative transporter; 99.9 4.1E-20 8.9E-25 197.2 33.5 167 49-245 11-179 (401)
66 TIGR00902 2A0127 phenyl propri 99.9 8.5E-20 1.8E-24 193.7 32.9 363 45-569 8-374 (382)
67 PRK15034 nitrate/nitrite trans 99.9 8.5E-20 1.8E-24 194.7 32.4 179 41-246 34-231 (462)
68 TIGR00881 2A0104 phosphoglycer 99.9 7.6E-21 1.7E-25 199.8 24.1 152 64-245 17-169 (379)
69 PRK10473 multidrug efflux syst 99.9 1E-19 2.2E-24 193.6 32.7 167 47-244 9-175 (392)
70 TIGR00792 gph sugar (Glycoside 99.9 9E-20 2E-24 196.7 32.5 353 51-534 9-381 (437)
71 TIGR00882 2A0105 oligosacchari 99.9 8.3E-20 1.8E-24 194.6 31.4 390 41-572 2-393 (396)
72 PRK11102 bicyclomycin/multidru 99.9 9.2E-20 2E-24 192.6 31.1 156 59-245 9-164 (377)
73 PRK10133 L-fucose transporter; 99.9 1.7E-19 3.6E-24 194.7 33.5 153 39-219 24-176 (438)
74 PF05977 MFS_3: Transmembrane 99.9 1.9E-19 4E-24 196.5 33.4 379 44-572 13-392 (524)
75 TIGR00889 2A0110 nucleoside tr 99.9 3.7E-19 8.1E-24 190.9 33.4 390 46-580 7-408 (418)
76 PRK06814 acylglycerophosphoeth 99.9 1.5E-19 3.2E-24 217.9 32.3 340 77-532 52-395 (1140)
77 PRK08633 2-acyl-glycerophospho 99.9 2.5E-19 5.4E-24 216.2 34.1 155 41-222 9-165 (1146)
78 KOG1330 Sugar transporter/spin 99.9 1.7E-21 3.7E-26 200.1 13.0 184 35-249 27-211 (493)
79 PRK11010 ampG muropeptide tran 99.9 1.3E-18 2.8E-23 190.5 35.7 177 39-244 10-192 (491)
80 PF00854 PTR2: POT family; In 99.9 3.7E-21 8.1E-26 203.3 14.0 365 108-516 1-369 (372)
81 TIGR00886 2A0108 nitrite extru 99.8 1.1E-19 2.3E-24 191.1 23.9 160 42-231 2-171 (366)
82 PF00083 Sugar_tr: Sugar (and 99.8 1.2E-24 2.7E-29 235.7 -14.9 399 77-588 46-450 (451)
83 COG2223 NarK Nitrate/nitrite t 99.8 2.8E-19 6E-24 182.7 24.9 392 37-578 10-405 (417)
84 PRK11128 putative 3-phenylprop 99.8 2.2E-18 4.7E-23 182.9 30.6 336 50-532 13-354 (382)
85 PRK11902 ampG muropeptide tran 99.8 1.5E-17 3.3E-22 177.6 34.4 167 46-241 4-176 (402)
86 TIGR00885 fucP L-fucose:H+ sym 99.8 9.3E-18 2E-22 179.6 32.6 170 43-240 5-200 (410)
87 TIGR00896 CynX cyanate transpo 99.8 1.1E-18 2.4E-23 183.1 24.2 327 61-534 20-349 (355)
88 TIGR00883 2A0106 metabolite-pr 99.8 3.4E-18 7.4E-23 180.6 26.4 154 64-239 15-183 (394)
89 TIGR00901 2A0125 AmpG-related 99.8 1.1E-17 2.3E-22 175.6 28.1 153 64-244 10-175 (356)
90 TIGR01301 GPH_sucrose GPH fami 99.8 5.8E-17 1.2E-21 174.2 33.0 446 41-578 4-475 (477)
91 PF06609 TRI12: Fungal trichot 99.8 2.8E-17 6E-22 179.1 28.8 388 63-532 65-466 (599)
92 PRK09848 glucuronide transport 99.8 2.4E-16 5.2E-21 170.9 35.7 360 46-535 13-390 (448)
93 PRK09669 putative symporter Ya 99.8 1.9E-16 4.2E-21 171.5 32.5 170 48-241 16-198 (444)
94 KOG0255 Synaptic vesicle trans 99.8 2.7E-17 5.9E-22 181.8 26.4 387 70-585 111-503 (521)
95 KOG0252 Inorganic phosphate tr 99.8 9.1E-18 2E-22 172.0 20.3 440 39-588 36-511 (538)
96 PRK10429 melibiose:sodium symp 99.8 4.1E-16 8.8E-21 170.3 34.5 364 47-535 12-395 (473)
97 TIGR00805 oat sodium-independe 99.8 1.8E-17 3.9E-22 186.0 24.1 205 37-248 28-282 (633)
98 PF03825 Nuc_H_symport: Nucleo 99.8 3.1E-16 6.8E-21 166.2 31.6 380 47-577 8-398 (400)
99 KOG2615 Permease of the major 99.8 3.2E-17 6.9E-22 164.4 22.3 117 74-221 65-181 (451)
100 TIGR02718 sider_RhtX_FptX side 99.8 4E-16 8.8E-21 165.9 31.9 177 43-246 3-183 (390)
101 PF01306 LacY_symp: LacY proto 99.7 1.9E-16 4E-21 165.5 23.6 391 41-578 7-404 (412)
102 TIGR00788 fbt folate/biopterin 99.7 2.3E-15 5E-20 163.7 32.7 380 42-534 27-414 (468)
103 PF13347 MFS_2: MFS/sugar tran 99.7 2.7E-16 5.9E-21 169.4 23.5 397 50-578 10-425 (428)
104 TIGR00806 rfc RFC reduced fola 99.7 1.2E-15 2.6E-20 160.3 26.0 156 60-247 44-203 (511)
105 KOG0253 Synaptic vesicle trans 99.7 1.2E-15 2.6E-20 152.0 23.7 416 57-582 93-527 (528)
106 COG0738 FucP Fucose permease [ 99.7 9.1E-15 2E-19 148.8 28.0 150 44-221 16-165 (422)
107 KOG2533 Permease of the major 99.7 9.4E-15 2E-19 157.5 28.6 150 70-249 74-229 (495)
108 KOG2504 Monocarboxylate transp 99.7 1.2E-15 2.6E-20 165.9 21.5 424 43-574 44-476 (509)
109 PTZ00207 hypothetical protein; 99.7 3E-13 6.6E-18 148.6 39.5 172 38-239 25-197 (591)
110 KOG3764 Vesicular amine transp 99.7 9.3E-16 2E-20 154.9 17.1 147 71-246 100-246 (464)
111 PRK11462 putative transporter; 99.7 7E-14 1.5E-18 151.9 32.5 152 47-220 15-170 (460)
112 COG2807 CynX Cyanate permease 99.7 7E-14 1.5E-18 140.4 28.6 368 46-575 17-386 (395)
113 COG2211 MelB Na+/melibiose sym 99.6 3.9E-13 8.5E-18 142.0 32.4 367 41-534 12-397 (467)
114 PRK10642 proline/glycine betai 99.6 7E-15 1.5E-19 161.3 18.9 179 39-244 248-427 (490)
115 PF11700 ATG22: Vacuole efflux 99.6 1.2E-11 2.6E-16 133.9 34.0 92 470-576 379-470 (477)
116 PF03209 PUCC: PUCC protein; 99.5 2.9E-11 6.3E-16 124.6 31.7 378 68-571 6-395 (403)
117 COG2271 UhpC Sugar phosphate p 99.5 3.5E-13 7.6E-18 138.0 14.5 180 41-247 252-434 (448)
118 KOG2325 Predicted transporter/ 99.5 2.7E-13 5.9E-18 143.5 14.1 195 30-250 23-232 (488)
119 PRK15011 sugar efflux transpor 99.5 1.9E-12 4.1E-17 138.0 20.6 174 41-245 216-389 (393)
120 PRK09952 shikimate transporter 99.5 1.5E-12 3.3E-17 140.7 19.3 184 37-246 246-432 (438)
121 PRK09556 uhpT sugar phosphate 99.5 1.3E-12 2.9E-17 142.4 18.4 177 41-245 258-447 (467)
122 TIGR00890 2A0111 Oxalate/Forma 99.4 2.1E-12 4.5E-17 135.5 17.3 169 42-239 206-374 (377)
123 TIGR00883 2A0106 metabolite-pr 99.4 1.3E-12 2.9E-17 137.8 14.9 173 37-236 215-390 (394)
124 KOG4686 Predicted sugar transp 99.4 6.3E-13 1.4E-17 128.3 10.6 366 41-532 44-413 (459)
125 PRK05122 major facilitator sup 99.4 5.6E-12 1.2E-16 134.4 18.3 170 51-253 226-395 (399)
126 KOG2563 Permease of the major 99.4 2.3E-11 4.9E-16 125.7 21.6 382 64-584 67-460 (480)
127 PRK03699 putative transporter; 99.4 6.9E-12 1.5E-16 133.6 18.4 171 41-242 205-375 (394)
128 TIGR00893 2A0114 d-galactonate 99.4 1E-11 2.3E-16 130.7 19.5 176 41-243 215-395 (399)
129 TIGR00889 2A0110 nucleoside tr 99.4 5.9E-12 1.3E-16 135.2 17.2 178 44-248 211-403 (418)
130 PRK11551 putative 3-hydroxyphe 99.4 9.8E-12 2.1E-16 132.8 18.3 171 43-244 222-393 (406)
131 cd06174 MFS The Major Facilita 99.4 1.6E-11 3.6E-16 127.1 19.2 173 41-243 175-348 (352)
132 TIGR00899 2A0120 sugar efflux 99.4 1.6E-11 3.6E-16 129.2 19.4 158 56-244 214-371 (375)
133 PRK11273 glpT sn-glycerol-3-ph 99.4 5.9E-12 1.3E-16 136.7 16.3 178 40-244 252-432 (452)
134 PRK11663 regulatory protein Uh 99.4 1.1E-11 2.4E-16 133.8 18.3 178 41-245 243-422 (434)
135 PRK09705 cynX putative cyanate 99.4 3.6E-11 7.8E-16 128.1 20.7 178 41-250 205-384 (393)
136 TIGR01299 synapt_SV2 synaptic 99.4 1.9E-11 4.1E-16 138.4 18.7 135 81-246 599-733 (742)
137 PRK09874 drug efflux system pr 99.4 1.9E-11 4.2E-16 130.4 17.7 166 53-248 231-399 (408)
138 PRK09528 lacY galactoside perm 99.4 7.2E-12 1.6E-16 134.6 14.5 163 53-245 235-401 (420)
139 TIGR00902 2A0127 phenyl propri 99.4 4.1E-11 8.9E-16 127.1 20.0 169 41-242 205-374 (382)
140 TIGR00897 2A0118 polyol permea 99.4 3.4E-11 7.3E-16 128.7 19.3 177 41-245 222-399 (402)
141 TIGR00891 2A0112 putative sial 99.3 2.1E-11 4.5E-16 129.6 15.7 160 43-231 240-400 (405)
142 PRK03545 putative arabinose tr 99.3 1.1E-10 2.3E-15 124.3 20.8 174 43-247 207-380 (390)
143 PRK10489 enterobactin exporter 99.3 2.9E-11 6.3E-16 129.8 16.5 162 57-248 239-400 (417)
144 PRK12382 putative transporter; 99.3 4.3E-11 9.4E-16 127.3 17.2 162 51-245 226-387 (392)
145 PRK03893 putative sialic acid 99.3 9.7E-11 2.1E-15 128.6 20.2 149 59-235 293-441 (496)
146 PRK15075 citrate-proton sympor 99.3 4.4E-11 9.6E-16 129.2 17.2 159 41-226 238-398 (434)
147 TIGR00880 2_A_01_02 Multidrug 99.3 1.1E-11 2.5E-16 110.3 10.5 133 83-245 4-136 (141)
148 PRK10406 alpha-ketoglutarate t 99.3 8.1E-11 1.8E-15 127.0 19.0 178 42-245 243-422 (432)
149 PRK03633 putative MFS family t 99.3 1.1E-10 2.5E-15 123.7 19.0 156 55-244 214-369 (381)
150 TIGR00712 glpT glycerol-3-phos 99.3 3.8E-11 8.3E-16 129.8 15.7 179 41-247 251-433 (438)
151 TIGR00881 2A0104 phosphoglycer 99.3 4.5E-11 9.8E-16 125.4 14.4 162 41-229 216-379 (379)
152 COG2814 AraJ Arabinose efflux 99.3 2.3E-10 5.1E-15 118.7 19.1 179 41-250 211-389 (394)
153 KOG4686 Predicted sugar transp 99.3 1E-10 2.2E-15 113.2 15.1 172 31-234 254-429 (459)
154 PF11700 ATG22: Vacuole efflux 99.3 2.7E-10 5.9E-15 123.4 19.6 185 39-247 279-468 (477)
155 PRK11010 ampG muropeptide tran 99.2 2.3E-10 5.1E-15 125.4 18.7 177 44-247 225-403 (491)
156 COG2223 NarK Nitrate/nitrite t 99.2 1.4E-10 3.1E-15 119.2 15.7 187 39-249 216-403 (417)
157 COG2270 Permeases of the major 99.2 1.9E-09 4E-14 111.1 23.1 107 61-187 35-148 (438)
158 TIGR01272 gluP glucose/galacto 99.2 6.6E-10 1.4E-14 114.4 19.9 80 152-237 8-103 (310)
159 TIGR00892 2A0113 monocarboxyla 99.2 2.5E-10 5.5E-15 124.0 17.4 171 41-241 241-415 (455)
160 PF03092 BT1: BT1 family; Int 99.2 7.7E-09 1.7E-13 111.4 28.5 162 63-248 11-176 (433)
161 TIGR00879 SP MFS transporter, 99.2 3.1E-10 6.6E-15 123.0 17.9 186 43-248 286-471 (481)
162 KOG2816 Predicted transporter 99.2 2.1E-09 4.7E-14 115.4 23.3 359 46-536 26-395 (463)
163 TIGR00894 2A0114euk Na(+)-depe 99.2 3E-10 6.5E-15 123.8 17.0 179 39-245 259-448 (465)
164 TIGR00882 2A0105 oligosacchari 99.2 3.7E-10 8E-15 120.4 16.7 171 42-242 216-390 (396)
165 PLN00028 nitrate transmembrane 99.2 5.1E-10 1.1E-14 122.4 17.6 174 42-247 253-433 (476)
166 PRK12307 putative sialic acid 99.2 7.6E-10 1.7E-14 119.0 18.2 152 52-232 242-393 (426)
167 PRK15402 multidrug efflux syst 99.2 1.6E-09 3.5E-14 115.8 20.0 169 41-235 215-383 (406)
168 PRK11128 putative 3-phenylprop 99.2 1.5E-09 3.2E-14 115.2 19.4 166 41-239 205-371 (382)
169 PRK10504 putative transporter; 99.2 9.7E-10 2.1E-14 119.9 18.4 158 41-225 261-418 (471)
170 TIGR00900 2A0121 H+ Antiporter 99.2 4.1E-10 8.8E-15 117.7 14.3 155 41-224 210-365 (365)
171 TIGR02332 HpaX 4-hydroxyphenyl 99.1 8.6E-10 1.9E-14 118.3 16.5 165 41-235 242-409 (412)
172 KOG2532 Permease of the major 99.1 4E-10 8.6E-15 121.5 13.6 214 5-246 219-446 (466)
173 TIGR01272 gluP glucose/galacto 99.1 1.6E-09 3.5E-14 111.5 17.5 163 40-235 139-303 (310)
174 TIGR00895 2A0115 benzoate tran 99.1 8.7E-10 1.9E-14 116.6 15.9 148 41-219 250-397 (398)
175 PRK10091 MFS transport protein 99.1 2.3E-09 5E-14 113.7 19.1 172 43-245 201-374 (382)
176 TIGR02718 sider_RhtX_FptX side 99.1 1.6E-09 3.5E-14 115.2 17.8 174 43-241 210-385 (390)
177 KOG3626 Organic anion transpor 99.1 5.2E-09 1.1E-13 115.6 21.8 203 41-251 96-347 (735)
178 PF03137 OATP: Organic Anion T 99.1 9.8E-12 2.1E-16 136.5 -0.6 197 45-253 7-256 (539)
179 PRK11902 ampG muropeptide tran 99.1 2.9E-09 6.3E-14 113.8 17.8 156 62-247 230-390 (402)
180 TIGR00792 gph sugar (Glycoside 99.1 9.8E-10 2.1E-14 118.5 14.2 162 41-226 222-384 (437)
181 TIGR00896 CynX cyanate transpo 99.1 2.7E-09 5.9E-14 111.8 17.1 153 41-224 197-350 (355)
182 TIGR00710 efflux_Bcr_CflA drug 99.1 4.7E-09 1E-13 110.8 18.6 162 42-230 207-369 (385)
183 PF05977 MFS_3: Transmembrane 99.1 4.2E-09 9.1E-14 115.4 17.5 167 48-244 225-391 (524)
184 PRK14995 methyl viologen resis 99.1 2.9E-09 6.3E-14 117.0 16.3 154 41-221 259-412 (495)
185 TIGR00711 efflux_EmrB drug res 99.0 2.6E-09 5.6E-14 116.8 15.1 156 41-222 255-410 (485)
186 PRK10077 xylE D-xylose transpo 99.0 1.5E-08 3.3E-13 110.7 20.0 164 59-249 289-459 (479)
187 TIGR00887 2A0109 phosphate:H+ 99.0 6.3E-09 1.4E-13 114.6 15.8 170 46-242 293-484 (502)
188 PRK10213 nepI ribonucleoside t 99.0 3.1E-08 6.7E-13 105.6 20.6 166 41-238 216-382 (394)
189 PRK10133 L-fucose transporter; 99.0 1.5E-08 3.2E-13 109.6 17.8 163 44-239 261-425 (438)
190 PRK10054 putative transporter; 99.0 8E-09 1.7E-13 110.2 15.5 173 42-244 207-381 (395)
191 PRK11646 multidrug resistance 99.0 1.4E-08 3.1E-13 108.4 17.1 151 60-240 227-381 (400)
192 PF07690 MFS_1: Major Facilita 99.0 3.3E-09 7.2E-14 110.2 11.6 144 43-213 208-352 (352)
193 PRK15034 nitrate/nitrite trans 98.9 3.7E-08 8E-13 105.8 18.7 185 41-245 252-452 (462)
194 PRK08633 2-acyl-glycerophospho 98.9 1.9E-08 4.1E-13 122.0 18.4 164 41-234 232-397 (1146)
195 COG2270 Permeases of the major 98.9 1.5E-08 3.3E-13 104.5 14.5 172 41-242 252-424 (438)
196 TIGR00903 2A0129 major facilit 98.9 4E-08 8.7E-13 103.7 18.0 167 41-244 192-362 (368)
197 PF05631 DUF791: Protein of un 98.9 6.5E-07 1.4E-11 91.3 25.5 155 69-249 61-218 (354)
198 TIGR00901 2A0125 AmpG-related 98.9 1.2E-08 2.7E-13 106.9 13.2 145 42-206 210-355 (356)
199 PRK06814 acylglycerophosphoeth 98.9 2.5E-08 5.5E-13 120.8 17.2 184 40-234 224-409 (1140)
200 PRK11102 bicyclomycin/multidru 98.9 9.3E-08 2E-12 100.9 18.9 150 42-218 195-345 (377)
201 PF13347 MFS_2: MFS/sugar tran 98.9 7.7E-08 1.7E-12 103.7 18.2 163 41-226 225-388 (428)
202 PRK09848 glucuronide transport 98.8 3.7E-08 8.1E-13 106.8 14.8 163 41-225 228-391 (448)
203 PRK11195 lysophospholipid tran 98.8 1.6E-07 3.5E-12 100.1 19.3 156 55-241 219-374 (393)
204 KOG0569 Permease of the major 98.8 7.1E-08 1.5E-12 103.3 16.0 186 41-252 269-459 (485)
205 PF01306 LacY_symp: LacY proto 98.8 9.3E-08 2E-12 100.5 16.5 181 39-249 218-402 (412)
206 KOG2504 Monocarboxylate transp 98.8 4.7E-08 1E-12 106.8 14.5 176 41-247 298-476 (509)
207 PRK11043 putative transporter; 98.8 3.4E-07 7.4E-12 97.6 20.8 153 49-228 211-363 (401)
208 COG2807 CynX Cyanate permease 98.8 3.6E-07 7.9E-12 92.5 18.8 166 41-236 208-374 (395)
209 PF03825 Nuc_H_symport: Nucleo 98.8 2.8E-07 6.1E-12 98.0 19.1 177 46-247 212-395 (400)
210 TIGR00898 2A0119 cation transp 98.8 4.8E-08 1E-12 107.6 13.7 142 71-245 352-493 (505)
211 PRK10473 multidrug efflux syst 98.7 3.6E-07 7.9E-12 97.1 18.0 70 58-128 220-289 (392)
212 PRK10429 melibiose:sodium symp 98.7 1.3E-07 2.8E-12 103.4 14.8 165 41-225 231-396 (473)
213 KOG0253 Synaptic vesicle trans 98.7 1.7E-07 3.6E-12 94.6 13.8 173 41-245 326-517 (528)
214 TIGR00886 2A0108 nitrite extru 98.7 1.2E-07 2.5E-12 99.6 12.6 141 42-209 226-366 (366)
215 KOG3098 Uncharacterized conser 98.7 1.5E-05 3.3E-10 84.9 26.9 100 83-213 56-155 (461)
216 PRK11652 emrD multidrug resist 98.7 1.8E-06 3.9E-11 91.8 20.1 143 57-227 223-365 (394)
217 KOG3762 Predicted transporter 98.6 5.3E-07 1.1E-11 95.4 15.0 142 391-580 411-553 (618)
218 TIGR00885 fucP L-fucose:H+ sym 98.6 8.9E-07 1.9E-11 94.9 16.6 162 43-237 234-402 (410)
219 PRK09669 putative symporter Ya 98.6 5.6E-07 1.2E-11 97.6 15.1 158 43-225 231-391 (444)
220 TIGR00880 2_A_01_02 Multidrug 98.6 1.4E-06 3E-11 77.2 14.9 133 395-575 7-139 (141)
221 COG0738 FucP Fucose permease [ 98.6 1.1E-06 2.3E-11 90.5 15.2 157 42-231 237-393 (422)
222 PF03209 PUCC: PUCC protein; 98.6 2.6E-06 5.6E-11 88.4 17.0 167 51-243 218-394 (403)
223 PF06813 Nodulin-like: Nodulin 98.5 4.8E-06 1E-10 82.1 16.0 170 52-247 13-182 (250)
224 TIGR00924 yjdL_sub1_fam amino 98.4 3.8E-06 8.2E-11 91.9 16.0 186 43-248 274-469 (475)
225 KOG1330 Sugar transporter/spin 98.4 1.2E-07 2.5E-12 98.9 2.3 146 389-581 71-216 (493)
226 KOG0637 Sucrose transporter an 98.4 2.1E-06 4.5E-11 89.4 11.3 166 41-219 32-202 (498)
227 PRK15403 multidrug efflux syst 98.4 1.6E-05 3.4E-10 85.4 18.2 169 41-237 218-387 (413)
228 TIGR01301 GPH_sucrose GPH fami 98.3 1.7E-05 3.6E-10 86.0 17.4 208 34-250 251-474 (477)
229 PF01770 Folate_carrier: Reduc 98.3 0.00011 2.3E-09 77.3 22.4 156 62-248 24-183 (412)
230 PRK11462 putative transporter; 98.3 2.7E-05 5.9E-10 84.8 18.7 158 45-225 232-390 (460)
231 COG0477 ProP Permeases of the 98.3 3.1E-05 6.7E-10 77.4 16.8 145 62-235 23-173 (338)
232 COG2211 MelB Na+/melibiose sym 98.2 2.8E-05 6.1E-10 82.9 16.0 159 44-225 239-399 (467)
233 PRK10207 dipeptide/tripeptide 98.2 1.7E-05 3.7E-10 87.0 13.6 147 53-219 281-438 (489)
234 PRK09584 tppB putative tripept 98.2 4.5E-05 9.7E-10 84.0 16.8 177 48-245 279-477 (500)
235 KOG3764 Vesicular amine transp 98.2 4.7E-06 1E-10 85.4 8.0 145 389-581 109-254 (464)
236 PF00083 Sugar_tr: Sugar (and 98.1 2.1E-08 4.5E-13 108.7 -10.3 187 41-250 252-439 (451)
237 KOG4332 Predicted sugar transp 98.1 9.3E-05 2E-09 71.9 15.5 93 67-184 62-155 (454)
238 KOG2533 Permease of the major 98.1 9.3E-06 2E-10 88.2 9.5 165 41-233 273-442 (495)
239 TIGR00805 oat sodium-independe 98.0 2.6E-05 5.6E-10 88.2 11.8 168 388-573 70-280 (633)
240 PF02487 CLN3: CLN3 protein; 98.0 0.00076 1.6E-08 70.9 21.6 61 470-530 334-394 (402)
241 TIGR00788 fbt folate/biopterin 98.0 1.8E-05 3.9E-10 86.4 9.4 136 69-224 280-415 (468)
242 PF12832 MFS_1_like: MFS_1 lik 98.0 5.6E-05 1.2E-09 60.3 9.4 68 48-117 7-74 (77)
243 KOG3762 Predicted transporter 98.0 2.4E-05 5.2E-10 83.1 8.7 173 46-249 376-549 (618)
244 TIGR00769 AAA ADP/ATP carrier 98.0 0.009 2E-07 64.6 28.4 161 41-220 7-189 (472)
245 PRK15462 dipeptide/tripeptide 97.9 4E-05 8.6E-10 83.4 9.9 132 397-574 56-189 (493)
246 KOG0254 Predicted transporter 97.9 0.00028 6E-09 78.0 15.8 193 38-249 291-485 (513)
247 KOG0252 Inorganic phosphate tr 97.8 3.5E-05 7.5E-10 80.5 6.0 180 41-247 304-498 (538)
248 PF06963 FPN1: Ferroportin1 (F 97.7 0.08 1.7E-06 56.7 29.8 189 41-242 2-195 (432)
249 TIGR00806 rfc RFC reduced fola 97.7 0.0011 2.3E-08 71.0 15.1 102 396-530 72-173 (511)
250 KOG3574 Acetyl-CoA transporter 97.6 0.042 9E-07 56.6 24.8 161 36-219 26-192 (510)
251 PF06609 TRI12: Fungal trichot 97.6 0.0029 6.2E-08 70.1 17.7 153 37-217 306-462 (599)
252 PTZ00207 hypothetical protein; 97.5 0.0023 5E-08 71.1 15.3 119 427-577 90-208 (591)
253 KOG2563 Permease of the major 97.3 0.0007 1.5E-08 71.0 8.6 185 41-251 266-454 (480)
254 KOG2325 Predicted transporter/ 97.2 0.0046 9.9E-08 66.5 13.6 157 395-581 80-236 (488)
255 KOG0255 Synaptic vesicle trans 97.2 0.0018 3.9E-08 71.7 10.5 131 395-577 127-257 (521)
256 PF05978 UNC-93: Ion channel r 97.1 0.014 3E-07 53.3 14.0 111 75-216 35-145 (156)
257 KOG2615 Permease of the major 97.1 0.0037 8E-08 64.3 10.3 129 64-221 283-413 (451)
258 KOG2816 Predicted transporter 97.0 0.0026 5.6E-08 68.8 8.9 152 38-220 237-390 (463)
259 PF06779 DUF1228: Protein of u 96.9 0.011 2.4E-07 47.8 9.3 72 55-128 6-77 (85)
260 PF13000 Acatn: Acetyl-coenzym 96.8 0.33 7.2E-06 52.1 22.1 62 472-533 406-467 (544)
261 PF03137 OATP: Organic Anion T 96.7 0.00042 9E-09 76.6 0.0 176 41-222 305-514 (539)
262 KOG3626 Organic anion transpor 96.7 0.011 2.3E-07 66.4 10.8 178 388-578 134-347 (735)
263 COG3202 ATP/ADP translocase [E 96.6 1.2 2.6E-05 47.8 25.0 164 39-221 25-209 (509)
264 COG3104 PTR2 Dipeptide/tripept 96.5 0.0034 7.3E-08 67.0 5.3 138 399-581 74-213 (498)
265 PRK03612 spermidine synthase; 96.4 0.14 3E-06 56.6 17.5 174 39-242 15-193 (521)
266 PF06813 Nodulin-like: Nodulin 96.2 0.062 1.3E-06 53.2 12.0 91 427-531 65-155 (250)
267 PF00854 PTR2: POT family; In 96.1 0.048 1E-06 57.6 11.6 125 429-580 2-129 (372)
268 KOG1479 Nucleoside transporter 96.0 2.6 5.7E-05 44.5 24.9 57 470-526 342-398 (406)
269 TIGR00939 2a57 Equilibrative N 95.9 3.1 6.7E-05 44.9 30.0 59 470-528 371-429 (437)
270 PF06963 FPN1: Ferroportin1 (F 95.9 0.18 3.9E-06 54.1 14.8 153 43-217 260-413 (432)
271 PF03092 BT1: BT1 family; Int 95.2 0.2 4.4E-06 54.1 12.4 118 427-576 58-177 (433)
272 PF03219 TLC: TLC ATP/ADP tran 95.1 1 2.3E-05 49.1 17.2 163 40-221 23-205 (491)
273 PF02487 CLN3: CLN3 protein; 95.1 0.084 1.8E-06 55.7 8.5 61 153-219 334-394 (402)
274 TIGR00926 2A1704 Peptide:H+ sy 94.5 0.52 1.1E-05 53.5 13.6 132 427-579 53-187 (654)
275 KOG0637 Sucrose transporter an 94.3 0.15 3.3E-06 54.0 8.1 130 388-528 69-200 (498)
276 PF05978 UNC-93: Ion channel r 94.0 0.88 1.9E-05 41.6 11.5 62 470-531 88-149 (156)
277 KOG3810 Micronutrient transpor 93.3 1.2 2.6E-05 45.8 12.0 96 469-572 324-419 (433)
278 KOG3098 Uncharacterized conser 93.3 2.3 4.9E-05 45.9 14.9 128 69-213 270-405 (461)
279 KOG4332 Predicted sugar transp 90.8 0.93 2E-05 44.8 7.6 140 79-242 284-426 (454)
280 TIGR00769 AAA ADP/ATP carrier 90.4 27 0.0006 38.0 19.3 56 477-532 134-190 (472)
281 TIGR00939 2a57 Equilibrative N 89.6 1.3 2.7E-05 47.9 8.4 155 41-215 269-427 (437)
282 KOG3880 Predicted small molecu 86.0 15 0.00033 37.3 12.5 59 470-528 341-399 (409)
283 PF01733 Nucleoside_tran: Nucl 85.8 0.23 5E-06 51.0 -0.1 115 82-214 187-302 (309)
284 PF05631 DUF791: Protein of un 85.1 31 0.00067 35.9 14.9 97 469-579 119-221 (354)
285 PF01770 Folate_carrier: Reduc 84.9 27 0.00059 37.2 14.8 62 470-532 93-154 (412)
286 PF07672 MFS_Mycoplasma: Mycop 84.7 11 0.00025 37.2 10.9 57 194-250 4-65 (267)
287 KOG3097 Predicted membrane pro 83.7 15 0.00032 37.8 11.4 115 38-184 26-140 (390)
288 PF03219 TLC: TLC ATP/ADP tran 82.7 80 0.0017 34.7 18.2 43 490-532 163-205 (491)
289 KOG3810 Micronutrient transpor 78.3 33 0.00072 35.6 11.9 141 49-221 242-384 (433)
290 PF13000 Acatn: Acetyl-coenzym 76.1 68 0.0015 35.1 14.0 66 154-225 405-470 (544)
291 COG0477 ProP Permeases of the 74.7 58 0.0013 31.4 13.0 62 471-532 94-157 (338)
292 KOG1479 Nucleoside transporter 72.6 7.7 0.00017 41.0 6.0 127 63-212 265-395 (406)
293 COG3202 ATP/ADP translocase [E 66.1 2.1E+02 0.0045 31.3 17.7 44 489-532 166-209 (509)
294 PF01733 Nucleoside_tran: Nucl 63.2 2.8 6.1E-05 43.0 0.5 58 470-527 247-304 (309)
295 COG5336 Uncharacterized protei 61.8 29 0.00063 29.2 6.0 34 88-121 53-86 (116)
296 KOG1237 H+/oligopeptide sympor 61.4 28 0.00062 38.9 8.0 139 427-581 103-252 (571)
297 PF07857 DUF1632: CEO family ( 59.9 83 0.0018 31.2 10.1 65 503-577 75-139 (254)
298 PRK03612 spermidine synthase; 59.2 1.4E+02 0.003 33.1 12.9 54 478-532 117-170 (521)
299 KOG3574 Acetyl-CoA transporter 54.9 50 0.0011 34.8 7.8 69 153-227 368-436 (510)
300 KOG4830 Predicted sugar transp 48.6 30 0.00065 34.3 4.8 64 46-111 22-94 (412)
301 COG3619 Predicted membrane pro 47.3 2.8E+02 0.006 27.0 15.9 61 43-103 14-81 (226)
302 PF09527 ATPase_gene1: Putativ 41.1 1.4E+02 0.003 21.7 6.4 32 86-117 9-40 (55)
303 PF06912 DUF1275: Protein of u 39.7 3.3E+02 0.0073 25.7 15.8 34 201-235 167-200 (209)
304 COG5336 Uncharacterized protei 38.7 1.9E+02 0.0041 24.5 7.3 34 502-535 37-70 (116)
305 PRK10263 DNA translocase FtsK; 38.4 1.8E+02 0.004 35.6 10.0 26 207-232 142-167 (1355)
306 PF07672 MFS_Mycoplasma: Mycop 30.9 5E+02 0.011 25.9 10.2 22 153-174 203-224 (267)
307 PF06645 SPC12: Microsomal sig 26.8 1.4E+02 0.0029 23.6 4.5 42 198-242 10-51 (76)
308 COG2119 Predicted membrane pro 26.6 4E+02 0.0087 25.0 8.1 34 86-120 143-176 (190)
309 COG4262 Predicted spermidine s 25.7 8.1E+02 0.018 25.8 12.0 121 38-181 6-132 (508)
310 TIGR02230 ATPase_gene1 F0F1-AT 24.7 2.4E+02 0.0051 23.6 5.8 23 91-113 56-78 (100)
311 TIGR02230 ATPase_gene1 F0F1-AT 24.1 2E+02 0.0044 24.1 5.2 16 61-76 59-74 (100)
312 PF12273 RCR: Chitin synthesis 22.0 43 0.00092 29.4 1.0 10 226-235 1-10 (130)
313 PF11947 DUF3464: Protein of u 21.4 1.6E+02 0.0034 26.8 4.4 32 174-211 114-145 (153)
314 KOG2601 Iron transporter [Inor 21.4 4.9E+02 0.011 27.7 8.4 74 43-117 29-102 (503)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-45 Score=398.08 Aligned_cols=545 Identities=44% Similarity=0.721 Sum_probs=483.0
Q ss_pred ccccCCCccccc---cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHH
Q 007612 24 SVDYYGRPAIRA---KSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFL 100 (596)
Q Consensus 24 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~l 100 (596)
..++.+++..+. +...|+....++..+.++..++|++...+..|+++.+|.+...+...+..+.......+++++++
T Consensus 17 ~~d~~~~~~~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~l 96 (571)
T KOG1237|consen 17 SVDYRGPLLGSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFL 96 (571)
T ss_pred eeeccCCcccccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 344444444443 66888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCC--CCCCCchhHHHHHHHHHHHHHhccccccchhhh
Q 007612 101 SDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTP--CGTHSSLEICLFYLSIYFVALGNGGYQPNIATF 178 (596)
Q Consensus 101 aDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~ 178 (596)
+|.|+||.+++.++.++..+|..++.+++..|.+.|+.|+.+.+. |+.++......++.+..+.++|.|+..|+..++
T Consensus 97 aD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~f 176 (571)
T KOG1237|consen 97 ADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAF 176 (571)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhh
Confidence 999999999999999999999999999999999999998444443 777788888999999999999999999999999
Q ss_pred hhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCC
Q 007612 179 GADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGN 258 (596)
Q Consensus 179 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (596)
.+|++++..+.+++.+...|.+++...++|..++..+..++.+..+|.+.|.+..+..++++++++...+.+++.+|.++
T Consensus 177 GadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gs 256 (571)
T KOG1237|consen 177 GADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGS 256 (571)
T ss_pred cccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCC
Confidence 99999966655565677999999999999999999999999889999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCcc
Q 007612 259 PLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVT 338 (596)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (596)
+...+.+++.++.+++....+.++..+ . +.........+.+.++++|++++....| +..+.+.+||+.|..+
T Consensus 257 p~t~i~~Vlvaa~~k~~~~~~~~~~~~-~-----~~~~~~~~~~~t~~f~~l~kaa~~~~~~--~~~~~~~~~w~lct~~ 328 (571)
T KOG1237|consen 257 PKTRIGQVLVAAAFKRKAVVSLDPEEL-Y-----YDCTDSVAIEGTKPFRFLDKAALKTSDD--LKDGLDANPWRLCTVT 328 (571)
T ss_pred chhHHHHHHHHHHHHHhccCCCcchhc-c-----ccccccccccCCcccchhhHhhccCCcc--cccccccCCccCCCce
Confidence 999999999999999988888775544 1 1112222334467889999998877665 2345567899999999
Q ss_pred chhhhhhhhhhHHHHHHhHhHhhhhccccceeEeeeccccccccc-cccCCccccccchhhHHHHHHhhhhhhhcccccc
Q 007612 339 QVEEVKCILRLLPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSN-FRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGI 417 (596)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~ 417 (596)
++++.|.+++.++++...+.+++.+.|+.++++.|+..++.+.++ +.++++.+..+..+...+..|+.+++..|+.+|.
T Consensus 329 ~Vee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~ 408 (571)
T KOG1237|consen 329 QVEEVKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKL 408 (571)
T ss_pred ehhhhhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhh
Confidence 999999999999999999999999999999999999999999987 9999999999999999999999999999999998
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHH
Q 007612 418 RKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFN 497 (596)
Q Consensus 418 ~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 497 (596)
. +++.+.+.++++.+|+++..+++...+.++..|.+.... +....++++++|++++|+++|++|.+..+..+++.+
T Consensus 409 t-~~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~---~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY 484 (571)
T KOG1237|consen 409 T-GNPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVS---LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFY 484 (571)
T ss_pred c-CCCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhh---ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhH
Confidence 8 666788999999999999999999999999988877754 222346799999999999999999999999999999
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC-CCCCCchhhHHHHHHHHHHHHHHHHHHhhccc
Q 007612 498 AQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVP-GNLNKGHLDRFYFLLAGLTTVDFVVYIACAKW 576 (596)
Q Consensus 498 ~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~ 576 (596)
+++|++||+.+++++.+...+|++++.+++..+...+.+ ..+|.+ +++|.+..+++||+++....++.+.+..+.++
T Consensus 485 ~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~ 562 (571)
T KOG1237|consen 485 SQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKR 562 (571)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEe
Confidence 999999999999999999999999999999988776543 447999 89999999999999999999999999999988
Q ss_pred ccccch
Q 007612 577 YKCIEL 582 (596)
Q Consensus 577 ~~~~~~ 582 (596)
++.++.
T Consensus 563 y~~~~~ 568 (571)
T KOG1237|consen 563 YDYKDD 568 (571)
T ss_pred eeeccc
Confidence 876554
No 2
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=3.7e-34 Score=311.78 Aligned_cols=463 Identities=16% Similarity=0.237 Sum_probs=324.1
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHH
Q 007612 36 KSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQ 115 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~ 115 (596)
.++|||.++.+++.+++++.++|++..+++.|+++++|++..+++++.+.+.....+..+++|+++||++||||+++++.
T Consensus 9 ~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~ 88 (489)
T PRK10207 9 LLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA 88 (489)
T ss_pred hhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999349999999999
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 116 GIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
+++.++.++++++.+ ....++++|+++++|.|...|+..++++|++|+++++ |.
T Consensus 89 ~~~~~g~~~~~~~~~----------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~----~~ 142 (489)
T PRK10207 89 IVLAIGYFMTGMSLL----------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR----LD 142 (489)
T ss_pred HHHHHHHHHHHHhcc----------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----hh
Confidence 999999999887621 1234668899999999999999999999999987521 67
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceecc--CCCCChhHHHHHHHH-----
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHF--KPSGNPLARFCQVIV----- 268 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----- 268 (596)
+++++++++.|+|..+||.+++++.++.||++.|++..+..+++++.+...++.+++. +|++++.+ ..+.+.
T Consensus 143 ~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~l~~~~~ 221 (489)
T PRK10207 143 GAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMS-FSKLLLVLLGS 221 (489)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchh-hhhHHHHHHHH
Confidence 8899999999999999999999999999999999997766655555555555444332 22222221 111100
Q ss_pred --HHHHhhccccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhh
Q 007612 269 --AATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCI 346 (596)
Q Consensus 269 --~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (596)
........ .+... . ...-......+....-..++. ..++. .+++.
T Consensus 222 ~~~~~~~~~~--~~~~~-~-------------------~~~~~~~~~~i~~~~f~~~~~----------~~~~~-~r~r~ 268 (489)
T PRK10207 222 VVMIFVCAWL--MHNVE-V-------------------ANLVLIVLSIVVTIIFFREAF----------KLDKT-GRNKM 268 (489)
T ss_pred HHHHHHHHHH--Hhhhh-H-------------------HHHHHHHHHHHHHHHHHHHHh----------cCCHH-HHHHH
Confidence 00000000 00000 0 000000000000000000000 00111 23444
Q ss_pred hhhHHHHHHhHhHhhhhccccceeEeeec-cccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCC
Q 007612 347 LRLLPIWLCTILYSVVFTQMASLFVEQGA-AMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGL 425 (596)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~ 425 (596)
+....++.....++..+.|..+.+..+.. +.+....|+.++++.++++|++..++..|+.+++..|+.+| +.++
T Consensus 269 ~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r-----~~~~ 343 (489)
T PRK10207 269 FVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSK-----GKDL 343 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhC-----CCCC
Confidence 44555666677888888887655443332 34445557777888889999999999999998766555333 2345
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhH
Q 007612 426 TELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLK 505 (596)
Q Consensus 426 ~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~r 505 (596)
+...++.+|+++.+++++.++...... ... ....+.+|+++.+++.++||.+..|+.++++.+.+|++++
T Consensus 344 ~~~~k~~~G~~l~~~~~~~~~~~~~~~---~~~-------~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~ 413 (489)
T PRK10207 344 SMPMKFTLGMFLCSLGFLTAAAAGMWF---ADA-------QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLM 413 (489)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhh---cCC-------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHH
Confidence 688899999999998887654322110 000 1135678899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 007612 506 SFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKC 579 (596)
Q Consensus 506 g~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~ 579 (596)
|.++|++++.+++|+.+|..+...... ..+. .-|. .....+.++|...++.+++..++++++.++.++
T Consensus 414 g~~~g~~~l~~~ig~~lg~~l~~~~~~-~~~~----~~~~-~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~ 481 (489)
T PRK10207 414 GFILGMWFLTQAAAFLLGGYVATFTAV-PDNI----TDPL-ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNR 481 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cccc----ccch-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888774421 0000 0000 012346778888888888888888777665543
No 3
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-35 Score=307.01 Aligned_cols=461 Identities=20% Similarity=0.322 Sum_probs=348.4
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchH
Q 007612 34 RAKSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQ----QNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFK 109 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg----~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~ 109 (596)
....+|||.++.+++.+++|+++||++...+..|++.+++ +|.+++..+.+.+....++.++++||++||++|+|+
T Consensus 14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~ 93 (498)
T COG3104 14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR 93 (498)
T ss_pred cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Confidence 3456799999999999999999999999999999998887 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccc
Q 007612 110 TCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAK 189 (596)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 189 (596)
++..+.++.++|.+.++... ......++++..++++|+|.+.|+..++++|++|+++++
T Consensus 94 tI~lGail~~iGh~~L~~~~---------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr 152 (498)
T COG3104 94 TIVLGAILMAIGHLVLAISS---------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR 152 (498)
T ss_pred HHHHHHHHHHHHHHHHhccc---------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc
Confidence 99999999999999998762 012566889999999999999999999999999998855
Q ss_pred cccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCC--CCChh------H
Q 007612 190 EGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKP--SGNPL------A 261 (596)
Q Consensus 190 ~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~ 261 (596)
|..+++++|++.|+|+.++|++.+++.+.+||+..|..+++.+.++++.++..+++...... ..++. .
T Consensus 153 ----rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~ 228 (498)
T COG3104 153 ----RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLP 228 (498)
T ss_pred ----cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhh
Confidence 77899999999999999999999999999999999999999999999988888877655432 11111 1
Q ss_pred HHHHHHHHHHHhh--ccccCCCcccchhcccCCCCCCCCCccccccccchh-hhhhhhccccccccccCCCCCCcccCcc
Q 007612 262 RFCQVIVAATKKW--RVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFL-DRAAYISSRDLDEQKQGCSNPWRLCPVT 338 (596)
Q Consensus 262 ~~~~~~~~~~~~~--~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (596)
.....+....... ... .. +..... ....+.... ..-....+| .+.
T Consensus 229 ~~~~~~~~~~~~~~~~~l---------~~----------------~~~~~~~~~~~i~~~~----~~~~~~~~~---~~~ 276 (498)
T COG3104 229 VLGGLVVMILAALLTLLL---------NQ----------------NTFSGVLLVISILIAI----IYFAEAFRS---PKV 276 (498)
T ss_pred hHHHHHHHHHHHHHHHHH---------HH----------------HHHHHHHHHHHHHHHH----HHHHHHhcc---Ccc
Confidence 1111111111100 000 00 000000 000000000 000000111 112
Q ss_pred chhhhhhhhhhHHHHHHhHhHhhhhccccceeEeee-ccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccc
Q 007612 339 QVEEVKCILRLLPIWLCTILYSVVFTQMASLFVEQG-AAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGI 417 (596)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~ 417 (596)
. .++|+++..+++++..++||..+.|.++.+..+. ...+.+..|+++++++++++|++..++++|+.++++.|+.++.
T Consensus 277 ~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~ 355 (498)
T COG3104 277 F-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN 355 (498)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC
Confidence 2 5788899999999999999999999998665544 3333443458899999999999999999999999998876653
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHH
Q 007612 418 RKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFN 497 (596)
Q Consensus 418 ~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 497 (596)
+.++...++..|+.+++.+++.+...... .+. ..+..+.+|+++.|++.++||-+..|...+++.
T Consensus 356 -----~~ps~~~KFalGl~l~g~~fl~l~~~~~~---~~~-------~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t 420 (498)
T COG3104 356 -----KQPSTPIKFALGLILAGLGFLILLLAGIW---FGG-------PSGLVSVWWLVLSYVLQSFGELFISPVGLSMVT 420 (498)
T ss_pred -----CCCCcchHHHHHHHHHHHHHHHHHHHHHh---hcC-------CCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 23458889999999999999887765322 010 034578999999999999999999999999999
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccc
Q 007612 498 AQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWY 577 (596)
Q Consensus 498 ~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~ 577 (596)
+.+|+++++..+|++.+....|+.++..+.+.-.. + + ...+......+|+..+...++..+......++.
T Consensus 421 ~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~-~--------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~ 490 (498)
T COG3104 421 KLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAV-T-D--------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKL 490 (498)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHhhceecccccc-c-c--------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 99999999999999999988888887766662111 0 0 012233445678888888887777666655554
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=3e-33 Score=304.31 Aligned_cols=452 Identities=16% Similarity=0.234 Sum_probs=326.1
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHH
Q 007612 36 KSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRV--LQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAI 113 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~ 113 (596)
..+++|.++.+++.+++++.++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++||++|||+++++
T Consensus 5 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 5 FFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 346888999999999999999999999999999987 999999999999999999999999999999993399999999
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccc
Q 007612 114 FQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHS 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 193 (596)
+.++.+++.++++++ + +...+++++++.|+|.|...|+..++++|++|+++.+ .
T Consensus 85 ~~~~~~~g~~~~~~~---~--------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~ 138 (475)
T TIGR00924 85 GGIVLMLGHFMLAMS---I--------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---R 138 (475)
T ss_pred HHHHHHHHHHHHHhc---c--------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---c
Confidence 999999998888876 2 2566788999999999999999999999999875411 1
Q ss_pred hhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhH----HH-H----
Q 007612 194 KVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLA----RF-C---- 264 (596)
Q Consensus 194 r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~---- 264 (596)
|++++++++++.|+|.++||.+++++.+..||++.|++.++..+++.+.++...+.+++.++++++.. +. .
T Consensus 139 r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (475)
T TIGR00924 139 RDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLA 218 (475)
T ss_pred ccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHH
Confidence 77899999999999999999999999998899999999886666665555555544433322111110 00 0
Q ss_pred --HHHHHHHHhhccccCCCcccchhcccCCCCCCCCCccccccccchh-hhhhhhccccccccccCCCCCCcccCccchh
Q 007612 265 --QVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFL-DRAAYISSRDLDEQKQGCSNPWRLCPVTQVE 341 (596)
Q Consensus 265 --~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (596)
..+....+..... ..... .+..... .....+.... . ...|. .+. .
T Consensus 219 ~~~~~~~~~~~~~~~-~~~~~--------------------~~~~~~~~~~~~~~~~~~----~--~~~~~----~~~-~ 266 (475)
T TIGR00924 219 LLAALALVFFCAWLM-HHVVI--------------------ANILLMTVTLAVIIFFFR----L--AFKPR----LDA-V 266 (475)
T ss_pred HHHHHHHHHHHHHHH-hccHH--------------------HHHHHHHHHHHHHHHHHH----H--HHhcc----CCH-H
Confidence 0000001110000 00000 0000000 0000000000 0 00010 011 2
Q ss_pred hhhhhhhhHHHHHHhHhHhhhhccccceeE-eeeccccccccccccCCccccccchhhHHHHHHhhhhhhhccccccccc
Q 007612 342 EVKCILRLLPIWLCTILYSVVFTQMASLFV-EQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKK 420 (596)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~ 420 (596)
++++....+++++...+++..+.|..+.+. .+...++..++++.++++.+.++|++..++..|+.+.+..++.+|.
T Consensus 267 ~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~--- 343 (475)
T TIGR00924 267 ARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKG--- 343 (475)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCC---
Confidence 234445567788888899999999887543 3334466666778888999999999999999999987665554441
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcC
Q 007612 421 NSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQA 500 (596)
Q Consensus 421 ~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 500 (596)
.+.+...++.+|+++.+++++.+++.... ... ..+.+.+|+++.+++.++||.+..|..++++++.+
T Consensus 344 --~~~~~~~k~~~G~~l~~~~~~~~~~~~~~----~~~-------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~a 410 (475)
T TIGR00924 344 --KDPTTPLKFTLGMLFCGASFLTFAASIWF----ADA-------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIA 410 (475)
T ss_pred --CCCCcHHHHHHHHHHHHHHHHHHHHHHhh----cCC-------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 22346678899999999999887764211 110 12468899999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccc
Q 007612 501 PDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWY 577 (596)
Q Consensus 501 P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~ 577 (596)
|++.||+++|++.+...+|+.+++.+...... ..++..+|...++++++..++++++.+..
T Consensus 411 P~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
T TIGR00924 411 PQRLMGQMLGMWFLAQAMGSLLGGYLATFGAV----------------PQGVTGVFGKIGLVTLLVGVVMALMVPWL 471 (475)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------ccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888775432 12344567777777777777777766554
No 5
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=2.3e-32 Score=299.11 Aligned_cols=458 Identities=16% Similarity=0.268 Sum_probs=320.7
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHH
Q 007612 36 KSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQ 115 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~ 115 (596)
..+++|.++.+++..++++..+|++.++++.|+++++|++..+++++.+.+........+++|+++||++|||++++++.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~ 95 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGA 95 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 34678889999999999999999999999999999999999999999988887777777899999999339999999999
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 116 GIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
++..++.+++.++. .+...++++++++|+|.|...++..+++.+++|+++++ |.
T Consensus 96 ~~~~ig~~l~~~~~----------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~----~~ 149 (500)
T PRK09584 96 IVLAIGYALVAWSG----------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR----LD 149 (500)
T ss_pred HHHHHHHHHHHHhc----------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----hh
Confidence 99999988887651 12455678889999999999999999999999876522 55
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceecc--CCCCChhHHH------HHHH
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHF--KPSGNPLARF------CQVI 267 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~ 267 (596)
.++++++++.|+|+.+||.++|++.++.||++.|++.++..+++++.++...+..+++ +|++++.+.. ....
T Consensus 150 ~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (500)
T PRK09584 150 GAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVV 229 (500)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHH
Confidence 6889999999999999999999999999999999998766666555444444333322 1222211110 0011
Q ss_pred HHHHH-hhccccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhh
Q 007612 268 VAATK-KWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCI 346 (596)
Q Consensus 268 ~~~~~-~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (596)
..... .....-++..... .............. ..+ ..++ .++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~---------~~~---~~~~-~~~~~~ 275 (500)
T PRK09584 230 ALIAIATWLLHNQEIARMA---------------------LGVVALGIVVIFGK---------EAF---AMKG-AARRKM 275 (500)
T ss_pred HHHHHHHHHHhcchHHHHH---------------------HHHHHHHHHHHHHH---------HHh---hcCH-HHHHHH
Confidence 11111 1000000000000 00000000000000 000 0011 234555
Q ss_pred hhhHHHHHHhHhHhhhhccccceeEeee-ccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCC
Q 007612 347 LRLLPIWLCTILYSVVFTQMASLFVEQG-AAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGL 425 (596)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~ 425 (596)
+..+.++...+.++..+.|.++.+..+. .+.+.+..|+..+++.++++|++..++.+|+.+++..|+.+|.
T Consensus 276 ~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-------- 347 (500)
T PRK09584 276 IVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-------- 347 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC--------
Confidence 5566677888889999999988766543 3345556677788899999999999999999987655443332
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhH
Q 007612 426 TELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLK 505 (596)
Q Consensus 426 ~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~r 505 (596)
+..+++.+|+++.+++++.++..... ... ....+.+|+++.+++.++||.+..|...+++.+.+|+++|
T Consensus 348 ~~~~~~~~G~~l~~l~f~~l~~~~~~----~~~-------~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~r 416 (500)
T PRK09584 348 PMPHKFAIGMVLCSGAFLVLPLGAKF----AND-------AGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLM 416 (500)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHh----cCC-------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHH
Confidence 37889999999999999887765321 000 1236678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCC-CCCchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 007612 506 SFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGN-LNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKC 579 (596)
Q Consensus 506 g~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~ 579 (596)
|+++|++.+...+|+.++..+...... + .-..+. ...+++..+|..+++++++..++++++.++.++
T Consensus 417 g~~~g~~~l~~a~g~~~~g~~~~~~~~----~---~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k 484 (500)
T PRK09584 417 GFIMGSWFLTTAGAALIAGYVANLMAV----P---DNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNR 484 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc----c---cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888888887777653321 0 000000 112347788888888888777777766665544
No 6
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=4.6e-32 Score=291.55 Aligned_cols=449 Identities=17% Similarity=0.241 Sum_probs=317.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
+|+|.++.+++.+++++..+|++..+++.|+++.+|+++.+++.+.+.+.....++++++|+++||+.||||+++++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999966999999999999
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
..++.+++..... +...++++..+.++|.|...++..++++|++|+++++ |.++
T Consensus 86 ~~lg~lll~~~~~----------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sg 139 (493)
T PRK15462 86 MAIGHVVLGASEI----------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGG 139 (493)
T ss_pred HHHHHHHHHHhhc----------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccce
Confidence 9888876654310 1233445555667888888899999999999986422 8899
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceecc---CCCCChhHHHH----HHHHHH
Q 007612 198 FSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHF---KPSGNPLARFC----QVIVAA 270 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~ 270 (596)
++++|...|+|+.++|.+.+++.+.+||++.|.++++.++++++.++...+...+. +++..+..... ..+...
T Consensus 140 f~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (493)
T PRK15462 140 FSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVL 219 (493)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHH
Confidence 99999999999999999999999989999999998777666666665555443332 11111101100 000000
Q ss_pred ------HHhhccccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhh
Q 007612 271 ------TKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVK 344 (596)
Q Consensus 271 ------~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (596)
........... ..+... .-.....+..... .. + ...++++
T Consensus 220 ~~~~~~~~~~~~~~~~~-~~~~~~-------------------~~~~~~~~~~~~~--------~~-----~-~~~~er~ 265 (493)
T PRK15462 220 LVATPALITVLFWKEWS-VYALIV-------------------ATIIGLGVLAKIY--------RK-----A-ENQKQRK 265 (493)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHH-------------------HHHHHHHHHHHHH--------Hh-----c-CCHHHHh
Confidence 00000000000 000000 0000000000000 00 0 1124577
Q ss_pred hhhhhHHHHHHhHhHhhhhccccceeE-eeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCC
Q 007612 345 CILRLLPIWLCTILYSVVFTQMASLFV-EQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSK 423 (596)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~ 423 (596)
++...++++...+.||..+.|.++.+. ....++|.++.|+.+++++++++|++.+++++|+...+..++.+| ++
T Consensus 266 r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~-----~~ 340 (493)
T PRK15462 266 ELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAG-----NR 340 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcC-----CC
Confidence 888888899999999999999987543 223677888889999999999999999999999999887665433 12
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCch
Q 007612 424 GLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDG 503 (596)
Q Consensus 424 ~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~ 503 (596)
+++...++.+|+++++++++.+.+..... +. ....+.+|++..++++++||.+..|..++++.+.+|++
T Consensus 341 ~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~---------~~--~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~ 409 (493)
T PRK15462 341 TVRIWGKFALGLGLMSAGFCILTLSARWS---------AM--YGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPG 409 (493)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhc---------CC--CCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHH
Confidence 34688899999999999998876643220 00 11368899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHH
Q 007612 504 LKSFGSALCMTSI-SLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVD 566 (596)
Q Consensus 504 ~rg~~~gl~~~~~-~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~ 566 (596)
.+|+.+|++.... .+|+.++..+.+.......++. .. ...+..+|..+|...+.++++.
T Consensus 410 ~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~-~~---~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 410 VTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDAS-GA---INYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcc-cc---ccchhhhHHHHHHHHHHHHHHH
Confidence 9999999997744 6788777766664422100000 00 0001235677888777777665
No 7
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.95 E-value=8.4e-26 Score=254.04 Aligned_cols=153 Identities=12% Similarity=0.073 Sum_probs=129.3
Q ss_pred HHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 007612 61 GVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCG 140 (596)
Q Consensus 61 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (596)
...+.+++.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++.+++.++++++
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa------------ 252 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFV------------ 252 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHH------------
Confidence 34455567788999999999999999999999999999999997 99999999999988888888877
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhc
Q 007612 141 NELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFE 220 (596)
Q Consensus 141 ~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~ 220 (596)
.+.+.++++|++.|++.|+..+...++++|.+|++. |++.+++......+|.++++.++.++.
T Consensus 253 -----------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 253 -----------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred -----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 237889999999999999999999999999999998 999999999999999999987765554
Q ss_pred cc-------------ccchHHHHHHHHHHHHHHHHH
Q 007612 221 DE-------------GMWALGFWVSTGSAFAALVLF 243 (596)
Q Consensus 221 ~~-------------~~~~~~f~~~~~~~~~~~~~~ 243 (596)
.. .+||+.|++.++..++.+++.
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~ 351 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGAL 351 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 32 368888877766555444433
No 8
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.95 E-value=2.3e-24 Score=239.63 Aligned_cols=335 Identities=27% Similarity=0.469 Sum_probs=266.5
Q ss_pred HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhcccccc
Q 007612 56 AFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIR 135 (596)
Q Consensus 56 ~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 135 (596)
+||++...+..|+++.+|++.+++..+...+.....+.++++|+++|+++||++++.++.++..+|..++.+....+.
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~-- 79 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSS-- 79 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccc--
Confidence 589999999999999999999999999999999999999999999999999999999999999999988887532111
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhh
Q 007612 136 PRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTI 215 (596)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i 215 (596)
.+..+....+++..+.++|.|+..|+..++.+|+++++++ +.|.+++.++|+++|+|+.+++++
T Consensus 80 -------------~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~i 143 (654)
T TIGR00926 80 -------------GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTII 143 (654)
T ss_pred -------------ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112344577888899999999999999999999986432 127899999999999999999999
Q ss_pred hhhhccc-------ccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhc
Q 007612 216 LGYFEDE-------GMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVI 288 (596)
Q Consensus 216 ~g~l~~~-------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 288 (596)
.+++.+. .+|..+|.+++++++++++++....+++++++|.+++.....+++..+.+++....++..
T Consensus 144 ~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~~------ 217 (654)
T TIGR00926 144 TPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEHW------ 217 (654)
T ss_pred HHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCccc------
Confidence 9988743 369999999999999998888888888887778777777777776666655332111100
Q ss_pred ccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhccccc
Q 007612 289 DANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFTQMAS 368 (596)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (596)
...|+|.+... + .+..++++|++++.+++++..+.+|..+.|..+
T Consensus 218 -----------------~~~~ld~a~~~---------------~---~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s 262 (654)
T TIGR00926 218 -----------------PLHWLDYAKDK---------------H---DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGS 262 (654)
T ss_pred -----------------chhHHHHhccc---------------c---ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 01223322110 0 113457788999999999999999999999999
Q ss_pred eeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 007612 369 LFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIV 448 (596)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~ 448 (596)
.+..|...++.+++++..++..++.++++..+++.|+.+..+.|..+|.+ .++++..++.+|++++++++++.+..
T Consensus 263 ~~~~qa~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~----~~ls~l~k~~iG~~la~la~~va~~v 338 (654)
T TIGR00926 263 RWTLQATRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCG----TRFTSLRKMAVGGLLAALSFFVAALV 338 (654)
T ss_pred HHHHHHHHhcCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcC----CCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887877777788899999999999999999999987777766543 34578999999999999999888776
Q ss_pred Hhhhh
Q 007612 449 ECYRL 453 (596)
Q Consensus 449 ~~~~~ 453 (596)
+..++
T Consensus 339 e~~~~ 343 (654)
T TIGR00926 339 QLKVN 343 (654)
T ss_pred HHHHh
Confidence 65544
No 9
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=1.4e-24 Score=231.49 Aligned_cols=378 Identities=12% Similarity=0.015 Sum_probs=250.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIF 118 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~ 118 (596)
..|.+..+++..+....+.....+.++.|+++++|.|+.+.+++.+.+.++..+++++.|+++||+ ||||+++++.++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 345677788888888888888889999999999999999999999999999999999999999997 9999999999888
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.++.+.+.++...++ ....+...+++.|+++|++.+...+...+++.|++|+++ |++++
T Consensus 92 ~~~~~~~~~~~~~~~---------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~ 150 (399)
T PRK05122 92 ALSGLLYLLAGLLAA---------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVI 150 (399)
T ss_pred HHHHHHHHHhhhhhc---------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccch
Confidence 777666554411111 001236678999999999999999999999999999988 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhcccc
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHL 278 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (596)
++.....++|..+||.+++++.+..+|++.+++..+..++..+.. .+ .++.++++++.
T Consensus 151 ~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~------------------ 208 (399)
T PRK05122 151 SWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA---RP-RPAVPPVKGER------------------ 208 (399)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH---hc-CCCCCCCCccc------------------
Confidence 999999999999999999999888999998877655433322211 11 11100000000
Q ss_pred CCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhh-hHHHHHHhH
Q 007612 279 SAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILR-LLPIWLCTI 357 (596)
Q Consensus 279 p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 357 (596)
.+++ +..|..+. .....+...
T Consensus 209 ---------------------------------------------------~~~~-------~~~~~~~~~~~~~~~~~~ 230 (399)
T PRK05122 209 ---------------------------------------------------LPFR-------RVLGRVWPYGMGLALASI 230 (399)
T ss_pred ---------------------------------------------------hhHH-------HHHHHHHHHHHHHHHHHH
Confidence 0000 00000000 000111111
Q ss_pred hHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHH
Q 007612 358 LYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVI 437 (596)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l 437 (596)
.+.......+.++.. .+.+ ..........++.++..++.+++ .+|.+ +++.+..+..+
T Consensus 231 ~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~g~l----~~r~~--------~~~~~~~~~~~ 288 (399)
T PRK05122 231 GFGTIATFITLYYAA--RGWD--------GAALALTLFGVAFVGARLLFGNL----INRLG--------GLRVAIVSLLV 288 (399)
T ss_pred HHHHHHHHHHHHHHH--cccc--------cchHHHHHHHHHHHHHHHHHHHH----HHHhc--------cHHHHHHHHHH
Confidence 111111111111111 0110 01111122233333444444433 44433 33446666666
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHH
Q 007612 438 AIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSIS 517 (596)
Q Consensus 438 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ 517 (596)
.++++...+.. .+.+..++..++.|++.+...+.......+.+|++.||+++|+++....
T Consensus 289 ~~~~~~~~~~~--------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 348 (399)
T PRK05122 289 EILGLLLLWLA--------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLD 348 (399)
T ss_pred HHHHHHHHHHh--------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 66666555442 1344555667888999988888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhccc
Q 007612 518 LGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKW 576 (596)
Q Consensus 518 lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~ 576 (596)
+|..+++.+.+.+.+. .+++..|++.+++++++.+..+++.++
T Consensus 349 ~g~~~~~~~~g~l~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 349 LSLGITGPLAGLVASW----------------FGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHHH----------------cCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999998877652 235778888888888776666655443
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=2.1e-24 Score=229.54 Aligned_cols=374 Identities=14% Similarity=0.068 Sum_probs=243.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIF 118 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~ 118 (596)
+|..++.+.+..+......+...+.+| .+.+++|.++.+.++..+.+.++..++.++.|+++||+ ||||++.++.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHH
Confidence 344455555555555444444333344 56789999999999999999999999999999999997 9999999999999
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.++.+.+.++ ++.+.++++|+++|++.+...+...+++.|++|+++ |++++
T Consensus 85 ~~~~~~~~~~-----------------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~ 135 (390)
T PRK03545 85 IASHVLSALA-----------------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQAL 135 (390)
T ss_pred HHHHHHHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHH
Confidence 9998888887 238889999999999999888999999999999988 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhcccc
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHL 278 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (596)
+++..+.++|..++|.+++.+.+..||++.|++.++..++..+..+...++.++++ +++..
T Consensus 136 g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~----------------- 196 (390)
T PRK03545 136 SLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEH--SGSLK----------------- 196 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--cchHH-----------------
Confidence 99999999999999999999988899999999887665544433333222211100 00000
Q ss_pred CCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhh-hhHHHHHHhH
Q 007612 279 SAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCIL-RLLPIWLCTI 357 (596)
Q Consensus 279 p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 357 (596)
+.. ++.+.+..+ .....++...
T Consensus 197 --------------------------------~~~-------------------------~~~~~~~~~~~~~~~~~~~~ 219 (390)
T PRK03545 197 --------------------------------SLP-------------------------LLFRRPALVSLYLLTVVVVT 219 (390)
T ss_pred --------------------------------HHH-------------------------HHHhCcHHHHHHHHHHHHHH
Confidence 000 000011111 1111111111
Q ss_pred hHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHH
Q 007612 358 LYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVI 437 (596)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l 437 (596)
..+......+.++.. ..+.+.. ..+.+.....++.++...+.++ +.+|.+ ++ .+..+..+
T Consensus 220 ~~~~~~~~~~~~l~~-~~g~s~~------~~~~~~~~~~~~~~~g~~~~g~----l~dr~~--------~~-~~~~~~~~ 279 (390)
T PRK03545 220 AHFTAYSYIEPFVQQ-VAGLSEN------FATLLLLLFGGAGIIGSVLFSR----LGNRHP--------SG-FLLIAIAL 279 (390)
T ss_pred HHHHHHHHHHHHHHH-hcCCCcc------HHHHHHHHHHHHHHHHHHHHHH----Hhhccc--------hh-HHHHHHHH
Confidence 222222222221111 1111111 1122222223334444444443 344432 11 24445554
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHH
Q 007612 438 AIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSIS 517 (596)
Q Consensus 438 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ 517 (596)
..++....... ..+.+.+++..++.|++.+...+.....+.+..| +.+++++|+++....
T Consensus 280 ~~~~~~~l~~~-------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 339 (390)
T PRK03545 280 LLVCLLLLLPA-------------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFN 339 (390)
T ss_pred HHHHHHHHHHH-------------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHH
Confidence 44444333221 1234555667778888887777778888888877 578999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcc
Q 007612 518 LGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAK 575 (596)
Q Consensus 518 lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~ 575 (596)
+|..+|+.+.|.+.+. .+++..|++.+++.+++++..+...+
T Consensus 340 ~g~~~G~~~~G~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 340 IGIGAGALLGNQVSLH----------------LGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHhc----------------cChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999987752 34566888888888888877776664
No 11
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.94 E-value=1.1e-24 Score=239.53 Aligned_cols=448 Identities=12% Similarity=0.036 Sum_probs=244.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRV-----LQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAI 113 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~ 113 (596)
+++.+.+..+..+...+....+...++. +..+ .+.++.+.+++.+...++..++.++.|+++||+ |||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~ 91 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKM-LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHH
Confidence 3445555555666665555444444443 3332 235566778999999999999999999999997 99999999
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccc
Q 007612 114 FQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHS 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 193 (596)
+.++..++.++++++.+.. ...+...++++|+++|++.|...+....+++|.+|++.
T Consensus 92 ~~~~~~v~~~~~~~~~~~~-----------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------ 148 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSS-----------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------ 148 (502)
T ss_pred HHHHHHHHHHHHHHccCcc-----------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------
Confidence 9999999888877751100 01235789999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHhHHHHHHhhhhhhhcc-----------------------cccchHHHHHHHHHHHHHHHHHHhcCcce
Q 007612 194 KVAFFSYFYLALNLGSLFSNTILGYFED-----------------------EGMWALGFWVSTGSAFAALVLFLAGTTRY 250 (596)
Q Consensus 194 r~~~~~~~~~~~~lg~~~~~~i~g~l~~-----------------------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 250 (596)
|+++.++.+....+|..+++.++..+.. ..+||+.|.+.++..++..+..+.
T Consensus 149 Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~----- 223 (502)
T TIGR00887 149 RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLT----- 223 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHh-----
Confidence 9999999999999999999887765421 237999997766555444333222
Q ss_pred eccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCC-CCCCCCccccccccchhhhhhhhccccccccccCCC
Q 007612 251 RHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDS-STNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCS 329 (596)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (596)
+||+|+|+..+++.++ +.+...+....+..+..+. ....+ ++++..+
T Consensus 224 ---------------------------lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~ 271 (502)
T TIGR00887 224 ---------------------------IPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDE--VEKAS---TAVEVPK 271 (502)
T ss_pred ---------------------------CCCCHHHHHHhCcchHHHHHHHHHHhccccccCccc--ccchh---ccccchh
Confidence 5666666655554422 2221211111000000000 00000 0000011
Q ss_pred CCCcccCccchhhhhhh-hhhHH---HHH-HhHhHhhhhccccceeEeeeccccccccccc-cC----Ccc-ccccchhh
Q 007612 330 NPWRLCPVTQVEEVKCI-LRLLP---IWL-CTILYSVVFTQMASLFVEQGAAMKTTVSNFR-IP----PAS-MSSFDILS 398 (596)
Q Consensus 330 ~~~~~~~~~~~~~~~~~-~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~~~~ 398 (596)
.+|+.+... ...++. .+.+. .++ ....++....+.++++ . ..+++....+.. .. ... ...+..++
T Consensus 272 ~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~-~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (502)
T TIGR00887 272 ASWSDFFTH--FFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVIL-S-AIGYSPPAATNNAYEELYKTAVGNLIIALAG 347 (502)
T ss_pred hhHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHH-H-HHcCCCCccchhHHHHHHHHHHHHHHHHHHH
Confidence 223211100 001111 11111 111 1111111111111111 1 111111100000 00 000 00011111
Q ss_pred HHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHH
Q 007612 399 VAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQY 478 (596)
Q Consensus 399 ~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (596)
.+....+.. .+.+|.+ || ..+.++..+.++++..+++.... ......++...
T Consensus 348 ~i~g~~~~~----~l~dr~g-RR-------~~l~~~~~~~~~~~~~l~~~~~~----------------~~~~~~~~~~~ 399 (502)
T TIGR00887 348 TVPGYWVTV----FLVDIIG-RK-------PIQLMGFFILTVLFFVLGFAYNH----------------LSTHGFLAIYV 399 (502)
T ss_pred HHHHHHHHH----HHhhhhc-ch-------hHHHHHHHHHHHHHHHHHHHHHh----------------cchhHHHHHHH
Confidence 222223333 3344544 22 23556666666665555442210 00111112221
Q ss_pred HHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHH
Q 007612 479 ALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFL 558 (596)
Q Consensus 479 ~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 558 (596)
+...++.....+..+.+..|.+|.+.|++++|+.++.+++++++++.+.+.+.+...... ++ ....++...|++
T Consensus 400 ~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~----~~~~~~~~~~~i 473 (502)
T TIGR00887 400 LAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTK--GY----PTGIWMGHVLEI 473 (502)
T ss_pred HHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccc--cc----cccccchHHHHH
Confidence 222222223446677888999999999999999999999999999999997654211000 00 001233456777
Q ss_pred HHHHHHHHHHHHHhhcccccccchhhhhh
Q 007612 559 LAGLTTVDFVVYIACAKWYKCIELEAKCA 587 (596)
Q Consensus 559 ~a~i~~i~~~~~~~~~~~~~~~~~~~~~~ 587 (596)
+++.++++.+++ ++.+|++++++||.++
T Consensus 474 ~~~~~~~~~i~~-~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 474 FALFMFLGILFT-LLIPETKGKSLEELSG 501 (502)
T ss_pred HHHHHHHHHHHh-eEeccCCCCCHHhhhC
Confidence 888888776654 5668999988877654
No 12
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=1.4e-24 Score=233.00 Aligned_cols=392 Identities=15% Similarity=0.102 Sum_probs=246.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHH
Q 007612 45 IILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVL 124 (596)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~ 124 (596)
..+..++............+|.+. ++++.++.+.+++.+...++..+++++.|+++||+ |||++++++.++..++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~ 98 (417)
T PRK10489 21 AVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIG 98 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHH
Confidence 444445555555555556666665 46778999999999999999999999999999997 9999998888777776665
Q ss_pred HHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHH
Q 007612 125 LSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLA 204 (596)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 204 (596)
+........ .+.+.+++.|++.|++.+...++..+++.+.+|+++ |+++.++.+..
T Consensus 99 ~~~~~~~~~------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 154 (417)
T PRK10489 99 LALNAFLPE------------------PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITMLT 154 (417)
T ss_pred HHHHHHcCC------------------CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHHH
Confidence 543211011 236778889999999988888888999999999888 99999999999
Q ss_pred HhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCccc
Q 007612 205 LNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGED 284 (596)
Q Consensus 205 ~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 284 (596)
.++|..+||.+++.+.+..+|++.|++.++..++..++.+..++..+++++++++..+
T Consensus 155 ~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------------------- 212 (417)
T PRK10489 155 VRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPPQPREHPLRS---------------------- 212 (417)
T ss_pred HhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccccchHH----------------------
Confidence 9999999999999998888999999887766555544433322110000000000000
Q ss_pred chhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhc
Q 007612 285 LYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFT 364 (596)
Q Consensus 285 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (596)
..+ +++ .+.+.+.+.......+..........
T Consensus 213 ------------------------~~~-------------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (417)
T PRK10489 213 ------------------------LLA-------------------GFR-----FLLASPVVGGIALLGGLLTMASAVRV 244 (417)
T ss_pred ------------------------HHH-------------------HHH-----HHHcChHHHHHHHHHHHHHHHHhHHH
Confidence 000 000 00011111111111111111111111
Q ss_pred cccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHH
Q 007612 365 QMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLA 444 (596)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~ 444 (596)
+.+ .+..+..+.+.. ..+.+.....++.++...+.+++ .+|.+ +.+.+..+.++.+++++.
T Consensus 245 ~~p-~~~~~~~g~~~~------~~g~~~~~~~~g~~ig~~~~~~l----~~~~~--------~~~~l~~~~~~~~~~~~~ 305 (417)
T PRK10489 245 LYP-ALADEVWQMGAA------QIGLLYAAVPLGAALGALTSGWL----AHSAR--------PGLLMLLSTLGSFLAVGL 305 (417)
T ss_pred hhH-HHHHhccCCChh------HhHHHHHHHHHHHHHHHHHHHHh----hhccC--------cchHHHHHHHHHHHHHHH
Confidence 111 111111111111 11222233334444444444433 33321 223456666666666655
Q ss_pred HHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHH
Q 007612 445 AGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSS 524 (596)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~ 524 (596)
+... .+.+......++.|++.+...+..+++..+.+|++.||+++|++++...+|..+|+
T Consensus 306 ~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~ 365 (417)
T PRK10489 306 FGLM--------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGA 365 (417)
T ss_pred HHcc--------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHH
Confidence 5432 23444556677788888888888889999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccchhhhhh
Q 007612 525 LLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKCIELEAKCA 587 (596)
Q Consensus 525 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~~~~~~~~ 587 (596)
.+.+.+.+.. ++...++..++..++..++.+...+++|++++|+.++
T Consensus 366 ~l~G~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 366 ALLGGLGAMM----------------TPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEV 412 (417)
T ss_pred HHHHHHHHHh----------------chhhHHHHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 9999887632 2234666667666666666667777878777776544
No 13
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=7.3e-24 Score=225.42 Aligned_cols=374 Identities=12% Similarity=0.020 Sum_probs=242.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.++.+.+..+..........+.+|.|+.+++|+|+.+.+++.+.+.++..+++++.|+++||+ ||||+++++.+...+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHH
Confidence 4566677777777777778888899999999999999999999999999999999999999997 999999998877666
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+.+........+. ....+...++++|+++|++.+...+...+++.|.+|+++ |++++++
T Consensus 94 ~~~~~~~~~~~~~---------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a~~~ 152 (392)
T PRK12382 94 AGLAYLLAAILPV---------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKVMSW 152 (392)
T ss_pred HHHHHHhhhcccc---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchhhhH
Confidence 5543322211011 001357889999999999999888888999999999888 9999999
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCC
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSA 280 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 280 (596)
.+.+.++|..++|.+++++.+..||++.+.+..+..++... .. ++.++.+++++..
T Consensus 153 ~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~-------------------- 208 (392)
T PRK12382 153 NGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA---FN-GTVRKVPAHAGER-------------------- 208 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH---HH-HhccCCCCCcccC--------------------
Confidence 99999999999999999998888999876655433222221 11 1111100000000
Q ss_pred CcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhh-hHHHHHHhHhH
Q 007612 281 EGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILR-LLPIWLCTILY 359 (596)
Q Consensus 281 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 359 (596)
.+++ +..|..+. ..........+
T Consensus 209 -------------------------------------------------~~~~-------~~~~~~~~~~~~~~l~~~~~ 232 (392)
T PRK12382 209 -------------------------------------------------PSLW-------SVVGLIWKPGLGLALQGVGF 232 (392)
T ss_pred -------------------------------------------------chHH-------HHHHHHHHhHHHHHHHHHHH
Confidence 0000 00000000 00011111111
Q ss_pred hhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHH
Q 007612 360 SVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAI 439 (596)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~ 439 (596)
.....+.+.++.. .+.+ ..........++.++..++.+++ .+|.+ + ++.+..+..+.+
T Consensus 233 ~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~g~l----~~r~g-~-------~~~~~~~~~~~~ 290 (392)
T PRK12382 233 AVIGTFVSLYFAS--KGWA--------MAGFTLTAFGGAFVLMRVLFGWM----PDRFG-G-------VKVAIVSLLVET 290 (392)
T ss_pred hHHHHHHHHHHHh--cCCc--------hhHHHHHHHHHHHHHHHHHHHHH----HHhcC-C-------CeehHHHHHHHH
Confidence 1111111111111 0000 01111122233334444555544 34443 1 123556666666
Q ss_pred HHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 007612 440 VAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLG 519 (596)
Q Consensus 440 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg 519 (596)
++++..... .+.+...+..++.+++.+...+...+...+.+|++.||++.|+.++...+|
T Consensus 291 ~~~~~~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 350 (392)
T PRK12382 291 VGLLLLWLA--------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIA 350 (392)
T ss_pred HHHHHHHHc--------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 666555442 134455566778889888888888888999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhc
Q 007612 520 NYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACA 574 (596)
Q Consensus 520 ~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~ 574 (596)
+.+++.+.+.+.+. .+++..|++.+++.+++.++.+...
T Consensus 351 ~~ig~~~~g~l~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 351 YGVSGPLAGMLATS----------------FGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHHHHHHHH----------------hCchHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999987762 2346688888887777776665443
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.94 E-value=5.8e-24 Score=233.24 Aligned_cols=399 Identities=12% Similarity=0.031 Sum_probs=246.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
+..+..+++..++..+..-.+...+|. +.+++|.+..+.+|+.+.+.++..++.++.|+++||+ |||++++++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~-i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPT-LSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 445666777777777766666665655 4678999999999999999999999999999999997 99999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccC-CccccccccchhhHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQY-DEEDAKEGHSKVAFF 198 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~ 198 (596)
++.++++++ + +.+.++++|+++|+|.+...|.....+.+.+ |+++ |++++
T Consensus 83 ~~~~~~~~a---~--------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~~~~ 133 (495)
T PRK14995 83 LASLAAAFS---P--------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RNMAL 133 (495)
T ss_pred HHHHHHHHc---C--------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HHHHH
Confidence 999999887 2 3888999999999999998888888887776 5566 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHH----HH--HHHHHH
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFC----QV--IVAATK 272 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~ 272 (596)
+++....++|..+||.+++++.++.+|||.|++.....++.+++.....++.+++++++....... .. +....+
T Consensus 134 g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~ 213 (495)
T PRK14995 134 GVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAK 213 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998776655555444444443222211111111100 00 000111
Q ss_pred hhccccCCCcccchhcccCCCCCCCCCccccccccc-h-hhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhH
Q 007612 273 KWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFK-F-LDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLL 350 (596)
Q Consensus 273 ~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (596)
. . ... .+ ....... . .......... ..+...+.|... ....+.|......
T Consensus 214 ~--~--~~~-~~-----------------~~~~~~~~~~~~~~~l~~f~---~~e~~~~~p~~~---~~lf~~~~~~~~~ 265 (495)
T PRK14995 214 T--A--LKG-FL-----------------SLWVTSLTLLTGALLLGLFI---RTQLAASRPMID---MRLFTHRIILSGV 265 (495)
T ss_pred h--c--ccc-CC-----------------chHHHHHHHHHHHHHHHHHH---HHHhcCCCCCcC---HHHhCCcccHHHH
Confidence 0 0 000 00 0000000 0 0000000000 000011222211 0111112211111
Q ss_pred -HHHHHhHhHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHH
Q 007612 351 -PIWLCTILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQ 429 (596)
Q Consensus 351 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~ 429 (596)
..++....+....... +.+.+...+.+.. ..+.+.....++..+..++.+++. +|.+ +++
T Consensus 266 ~~~~~~~~~~~~~~~~~-~~~lq~v~g~s~~------~ag~~~~~~~~~~~~~~~~~g~l~----~r~g--------~~~ 326 (495)
T PRK14995 266 VMAMTAMITLVGFELLM-AQELQFVHGLSPL------EAGMFMLPVMVASGFSGPIAGILV----SRLG--------LRL 326 (495)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHcCCCHH------HHHHHHHHHHHHHHHHHHHHHHHH----HHcC--------chH
Confidence 1111111111111111 1111111111111 122333333455555666666543 4443 233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHH
Q 007612 430 RMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGS 509 (596)
Q Consensus 430 ~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~ 509 (596)
.+..|+++.++++..+.... ...+.+.....+++.|++.+...+.....+.+.+|++.+|.++
T Consensus 327 ~~~~g~~~~~~~~~~l~~~~-----------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~ 389 (495)
T PRK14995 327 VATGGMALSALSFYGLAMTD-----------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAG 389 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhc-----------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHH
Confidence 46677777777766554432 1123444556778889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 007612 510 ALCMTSISLGNYVSSLLLTMVMKI 533 (596)
Q Consensus 510 gl~~~~~~lg~~lg~~l~~~i~~~ 533 (596)
++.++.+.+|+.+|+.+.+.+.+.
T Consensus 390 ~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 390 AIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988654
No 15
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=6.6e-25 Score=239.68 Aligned_cols=434 Identities=13% Similarity=0.069 Sum_probs=244.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVL--------QQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTC 111 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--------g~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l 111 (596)
.+.+++..+..+...+....+.+..+ .+++.+ |.++.+.+++.+.+.++..+++++.|+++||+ ||||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~ 88 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVE-SLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSL 88 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHH-HHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHH
Confidence 34445455444444443333333333 344444 88999999999999999999999999999997 999999
Q ss_pred HHHHHHHHHHHHHHHhhhcc-ccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCcccccc
Q 007612 112 AIFQGIFVIGLVLLSLSSYL-FLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKE 190 (596)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 190 (596)
+++.+++.++.+..+++... ... ...+......++++|+++|++.|+..+...++++|++|+++
T Consensus 89 ~~~~~l~~i~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~--- 153 (479)
T PRK10077 89 KIAAVLFFISALGSAWPEFGFTSI------------GPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI--- 153 (479)
T ss_pred HHHHHHHHHHHHHHHhhccccccc------------cccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh---
Confidence 99999988887777653100 000 00011235678899999999999999999999999999998
Q ss_pred ccchhhHHHHHHHHHhHHHHHHhhhhhhhc--------ccccchHHHHHHHHHHHHHHHHHHhcCcceeccC-CCCChhH
Q 007612 191 GHSKVAFFSYFYLALNLGSLFSNTILGYFE--------DEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFK-PSGNPLA 261 (596)
Q Consensus 191 ~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~--------~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 261 (596)
|++++++.+.+..+|.++++.+++.+. +..+||++|++.++..++..+..++. ++.++.. .+++. +
T Consensus 154 ---rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l-~~s~~~l~~~~~~-~ 228 (479)
T PRK10077 154 ---RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFV-PETPRYLMSRGKQ-E 228 (479)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcC-CCCcHHHHHcCCH-H
Confidence 999999999999999999887665442 45799999998776655554433332 3221110 01110 0
Q ss_pred HHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchh
Q 007612 262 RFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVE 341 (596)
Q Consensus 262 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (596)
+..+... +... ++. .....+.. ++ ...... +
T Consensus 229 ~~~~~~~---~~~~---~~~------------------------~~~~~~~~-----~~--~~~~~~------------~ 259 (479)
T PRK10077 229 QAEGILR---KIMG---NTL------------------------ATQALQEI-----KH--SLDHGR------------K 259 (479)
T ss_pred HHHHHHH---HHcC---Chh------------------------HHHHHHHH-----HH--HHHHhh------------h
Confidence 0000000 0000 000 00000000 00 000000 0
Q ss_pred hhhhhhhhH---HHHHHhHhHhhhhcccc------ceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhc
Q 007612 342 EVKCILRLL---PIWLCTILYSVVFTQMA------SLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEP 412 (596)
Q Consensus 342 ~~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 412 (596)
..+..+... ............+..+. +.+.. ..+.+.. ..........+..++..++.+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~-~~g~~~~------~~~~~~~~~~~~~~i~~~~~g~l--- 329 (479)
T PRK10077 260 TGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFK-TLGASTD------IALLQTIIVGVINLTFTVLAIMT--- 329 (479)
T ss_pred hhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHH-HcCCCCc------hHHHHHHHHHHHHHHHHHHHHHH---
Confidence 000000000 00000010010000000 00000 0011100 01111122233334444455544
Q ss_pred ccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhh-hhh
Q 007612 413 LAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFM-YVA 491 (596)
Q Consensus 413 ~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~ 491 (596)
.+|.+ ++..+..+.++++++++.++..... +....+......+.+.+.+.. .|.
T Consensus 330 -~dr~g--------~r~~~i~~~~~~~v~~~~l~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (479)
T PRK10077 330 -VDKFG--------RKPLQIIGALGMAIGMFSLGTAFYT----------------QAPGIVALLSMLFYVAAFAMSWGPV 384 (479)
T ss_pred -HHHhc--------ChHHHHHhHHHHHHHHHHHHHHHhc----------------CcccHHHHHHHHHHHHHHhccccch
Confidence 34443 3345777888888877766543211 112223333444455554443 367
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 007612 492 QLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYI 571 (596)
Q Consensus 492 ~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~ 571 (596)
.+.++.|.+|++.||+++|+.+..+++|+.+++.+.+.+.+. +|.. +..+....|++.++++++++++.+
T Consensus 385 ~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 454 (479)
T PRK10077 385 CWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKN-------SWLV---AHFHNGFSYWIYGCMGVLAALFMW 454 (479)
T ss_pred hHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-------cchh---hhccCccHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999998888755420 1221 112234567777888888888777
Q ss_pred hhcccccccchhhhhhhc
Q 007612 572 ACAKWYKCIELEAKCAES 589 (596)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~ 589 (596)
++.+|+|+++.|+.+++.
T Consensus 455 ~~~~e~~~~~~~~~~~~~ 472 (479)
T PRK10077 455 KFVPETKGKTLEEMEALW 472 (479)
T ss_pred hccccCCCCCHHHHHHHH
Confidence 788888888777655443
No 16
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=2.4e-24 Score=232.43 Aligned_cols=167 Identities=16% Similarity=0.087 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
..+..++..++.....+.....++.+ .+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~ 101 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGII 101 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHH
Confidence 34444555555555555555556555 457999999999999999999999999999999997 9999999999999999
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.+++.++ .+++.+++.|++.|++.|...+...+++.+++|+++ |+++++++
T Consensus 102 ~~~~~~~-----------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~ 152 (434)
T PRK11663 102 NILFGFS-----------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIW 152 (434)
T ss_pred HHHHHHH-----------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHH
Confidence 8888877 237778889999999999888999999999999988 99999999
Q ss_pred HHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHH
Q 007612 202 YLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAA 239 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~ 239 (596)
+.+.++|..++|.+.+++.+.++|++.|++.++..++.
T Consensus 153 ~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 153 NTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 99999999999999999998899999998877654433
No 17
>PRK10504 putative transporter; Provisional
Probab=99.94 E-value=1.1e-23 Score=229.77 Aligned_cols=179 Identities=15% Similarity=0.116 Sum_probs=153.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
.+.+|++++..++.....+.+.+.+|.+.+ ++|.++.+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 346788888888888888888888887765 6999999999999999999999999999999997 99999999988888
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
++.+++.++ + +...++++|+++|++.+...|...+++.|.+|+++ |+++.+
T Consensus 87 ~~~~~~~~~---~--------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 137 (471)
T PRK10504 87 LGSLFCALS---G--------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAMT 137 (471)
T ss_pred HHHHHHHHh---C--------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHHH
Confidence 888777765 2 37778899999999999999999999999999888 999999
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcc
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTR 249 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 249 (596)
+.+...++|..++|.++|++.+..+|++.|++......+..+......++
T Consensus 138 ~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 138 FVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999998776555555444444333
No 18
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=3e-24 Score=228.78 Aligned_cols=175 Identities=17% Similarity=0.174 Sum_probs=152.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
+.+|.++.+++..++...+.+.+.++++.|+++++|++..+.+++.+.+.++..+++++.|+++||+ |||++++++.++
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~ 82 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITA 82 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHH
Confidence 4556788888999999999999999999999999999999999999999999999999999999997 999999999888
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
..++.+++.++ ++.+.+++++.+.+.+.+...+...++..|.+|+++ |+++
T Consensus 83 ~~~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 133 (395)
T PRK10054 83 FASGFIAIPLV-----------------------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKI 133 (395)
T ss_pred HHHHHHHHHHH-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHH
Confidence 88888777776 236667777888887777778889999999999888 9999
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHH
Q 007612 198 FSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLF 243 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~ 243 (596)
+++.+...++|..++|.+++++.+ .+|+.+|++.++..++..+..
T Consensus 134 ~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 134 FSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999998875 689999998776666554443
No 19
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.9e-23 Score=215.49 Aligned_cols=380 Identities=15% Similarity=0.097 Sum_probs=269.9
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH
Q 007612 37 SGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG 116 (596)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~ 116 (596)
+..+..++.+.+..|....+-+.....+|. +.+++|.|..++|+.++.+.++..++.|+...+.||+ .||++++..+.
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 455667888888888888888888777664 6789999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
+++++.++.+++ |+ +..++++|++.|+..|.+++...++.++..|+++ |++
T Consensus 87 lFi~~n~l~alA---p~--------------------f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~ 137 (394)
T COG2814 87 LFIVSNLLSALA---PS--------------------FAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGR 137 (394)
T ss_pred HHHHHHHHHHHh---cc--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhh
Confidence 999999999999 44 9999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCc-ceeccCCCCChhHHHHHHHHHHHHhhc
Q 007612 197 FFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTT-RYRHFKPSGNPLARFCQVIVAATKKWR 275 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (596)
+.++...+..++.++|..++.++.+.+|||+.|+..++..++.++..+...| +..++++.. +..+
T Consensus 138 Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~-~~~~------------- 203 (394)
T COG2814 138 ALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISGSLPG-PLRT------------- 203 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCc-chhH-------------
Confidence 9999999999999999999999999999999999988887777776665555 111100000 0000
Q ss_pred cccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHH
Q 007612 276 VHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLC 355 (596)
Q Consensus 276 ~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (596)
. ++ ..++.+.+..+....+.
T Consensus 204 ------------------------------------~-------------------~~-----~l~~p~v~~~l~~t~l~ 223 (394)
T COG2814 204 ------------------------------------L-------------------LR-----LLRRPGVLLGLLATFLF 223 (394)
T ss_pred ------------------------------------H-------------------HH-----HhcCchHHHHHHHHHHH
Confidence 0 00 00011112222222333
Q ss_pred hHhHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHH
Q 007612 356 TILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGL 435 (596)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~ 435 (596)
....+..|.+..+++.+ ..+++.+ ..+.+....+++.++...+.++ +.|| + .++.+....
T Consensus 224 ~~g~F~~ftYi~P~L~~-v~g~s~~------~vs~~Ll~~Gv~~~~Gn~~gGr----l~dr-~--------~~~~l~~~~ 283 (394)
T COG2814 224 MTGHFALYTYIRPFLES-VAGFSVS------AVSLVLLAFGIAGFIGNLLGGR----LADR-G--------PRRALIAAL 283 (394)
T ss_pred HcchhhhHHhHHHHHHH-ccCCCHh------HHHHHHHHHHHHHHHHHHHHhh----hccc-c--------chhHHHHHH
Confidence 33334444333332221 1111111 1223333344555555555553 3444 2 445566666
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHH
Q 007612 436 VIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTS 515 (596)
Q Consensus 436 ~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~ 515 (596)
.+.++.++.+.+.. .+.+..+...++.+++.....+..+....+.. ++.++.+++++...
T Consensus 284 ~l~a~~~l~l~~~~-------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa 343 (394)
T COG2814 284 LLLALALLALTFTG-------------------ASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAA 343 (394)
T ss_pred HHHHHHHHHHHHhc-------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHH
Confidence 77777776665532 23444455555566666666666666666644 46799999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccc
Q 007612 516 ISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWY 577 (596)
Q Consensus 516 ~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~ 577 (596)
.++|..+|..+.|.+.+ ..++....|+.+++.+++.+..+...+..
T Consensus 344 ~nlgia~GA~lGG~v~~----------------~~g~~~~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 344 FNLGIALGAALGGLVLD----------------ALGYAATGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred HHHHHHHHHHHHHHHHH----------------hhchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999998876 34566778888888888877776655543
No 20
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=9.1e-24 Score=225.43 Aligned_cols=168 Identities=14% Similarity=0.153 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 007612 44 IIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLV 123 (596)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~ 123 (596)
+++++..++...+.+.+.++++.|+++++|+|+.+.+.+.+...+...+..+++|+++||+ |||++++++.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 6677888899999999999999999999999999999999999999999999999999997 999999999999999888
Q ss_pred HHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHH
Q 007612 124 LLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYL 203 (596)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 203 (596)
++.+. + +.+.+++.|++.|++.+...|...+++.|.+|+++ |++++++.+.
T Consensus 92 ~~~~~---~--------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~~ 142 (400)
T PRK11646 92 TMAIA---H--------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLMM 142 (400)
T ss_pred HHHHh---c--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHH
Confidence 88766 2 37778899999999998888999999999999988 9999999999
Q ss_pred HHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHH
Q 007612 204 ALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVL 242 (596)
Q Consensus 204 ~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~ 242 (596)
..++|..+||.+++++. ..+|++.|++.++..++..++
T Consensus 143 ~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 143 QDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 679999999877655544433
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=1.1e-23 Score=225.08 Aligned_cols=384 Identities=13% Similarity=0.091 Sum_probs=242.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
.++..+.+.+...+.+.+..+......| .+.+++|.++.+.+++.+...++..++.++.|+++||+ |||+++.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHH
Confidence 4455666666777777777766655555 45678999999999999999999999999999999997 999999999888
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
..++.+++.++ .+...+++.|++.|++.+...+...+++.|++|+++ |+++
T Consensus 90 ~~~~~~~~~~~-----------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~ 140 (406)
T PRK11551 90 FGLFSLATAQA-----------------------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTA 140 (406)
T ss_pred HHHHHHHHHHh-----------------------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 88887777766 237788899999999999999999999999999988 9999
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccc
Q 007612 198 FSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVH 277 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (596)
+++.+.+.++|..+++.+++.+.+..+|++.|++.++..++..++.....++.++.++++..
T Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------------------ 202 (406)
T PRK11551 141 VSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA------------------ 202 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc------------------
Confidence 99999999999999999998888889999999887655444443333322221110000000
Q ss_pred cCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhH
Q 007612 278 LSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTI 357 (596)
Q Consensus 278 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (596)
.++ ..+..+. . + +..+.++........+....
T Consensus 203 -~~~------------------------~~~~~~~--~----------------~-----~~~~~~~~~~~~~~~~~~~~ 234 (406)
T PRK11551 203 -GKQ------------------------RAPVLRA--L----------------F-----GEGRATATLLLWISYFFTLI 234 (406)
T ss_pred -chh------------------------hhhhHHH--H----------------h-----hhhhhhHHHHHHHHHHHHHH
Confidence 000 0000000 0 0 00000111111111111112
Q ss_pred hHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHH
Q 007612 358 LYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVI 437 (596)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l 437 (596)
.++....+.+.+... .+.+.. ..+.......++.++...+.+++ .+|.+ +++.+.++.+.
T Consensus 235 ~~~~~~~~~p~~~~~--~g~s~~------~~~~~~~~~~~~~~~~~~~~g~l----~dr~g--------~~~~~~~~~~~ 294 (406)
T PRK11551 235 VLYFLLNWLPSLLVG--QGLSRS------QAGLVQIAFNIGGALGSLLIGAL----MDRLR--------PRRVVLLIYAG 294 (406)
T ss_pred HHHHHHHHHHHHHHh--CCCChh------hhhHHHHHHHHHHHHHHHHHHHH----HHHHh--------HHHHHHHHHHH
Confidence 222222222221111 111111 12223333334444555555544 34433 22334444444
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHH
Q 007612 438 AIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSIS 517 (596)
Q Consensus 438 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ 517 (596)
..++++.+... .+.+.+....++.+++.....+..+++..|.+|++.||++.|+.++...
T Consensus 295 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 354 (406)
T PRK11551 295 ILASLAALAAA--------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGR 354 (406)
T ss_pred HHHHHHHHHhc--------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhh
Confidence 44444443321 1334445556677777777788888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Q 007612 518 LGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIAC 573 (596)
Q Consensus 518 lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~ 573 (596)
+|..+|+.+.+.+.+. .+++...++..+...+++.+..+..
T Consensus 355 ~g~~~g~~~~g~l~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 355 LGSMAGPLLAGQLLAL---------------GRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHhhhHhhhhcc---------------CCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999977542 1233445665555555555554443
No 22
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.93 E-value=3.4e-24 Score=233.52 Aligned_cols=152 Identities=9% Similarity=-0.065 Sum_probs=125.5
Q ss_pred HHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCC
Q 007612 65 VLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELT 144 (596)
Q Consensus 65 ~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (596)
.+.+.+++|+++.+.+++.+.+.+++.++++++|+++||+ |||+++.++.++..++.+.+++....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~------------- 117 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS------------- 117 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 3457789999999999999999999999999999999997 99999998888777776666543110
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccc-
Q 007612 145 PCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEG- 223 (596)
Q Consensus 145 ~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~- 223 (596)
..++...+++.|++.|++.+...|...+++++++|+++ |+++++++..+.++|..+++.+..++.+..
T Consensus 118 -----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 118 -----GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred -----ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 01348889999999999999999999999999999999 999999999999999999998887665542
Q ss_pred --cchHHHHHHHHHHHHHHH
Q 007612 224 --MWALGFWVSTGSAFAALV 241 (596)
Q Consensus 224 --~~~~~f~~~~~~~~~~~~ 241 (596)
+|+..|.+.++..++..+
T Consensus 187 ~~~~~~~f~~~g~~~~~~~i 206 (467)
T PRK09556 187 DGHVIGMFIFPSIIALIIGF 206 (467)
T ss_pred cCcchhHHHHHHHHHHHHHH
Confidence 688888776655444333
No 23
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=1.4e-24 Score=235.41 Aligned_cols=144 Identities=19% Similarity=0.253 Sum_probs=123.6
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhH
Q 007612 75 NNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEI 154 (596)
Q Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (596)
+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++.+.... .+.
T Consensus 69 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~ 127 (481)
T TIGR00879 69 SSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFA--------------------LSV 127 (481)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccc--------------------cch
Confidence 389999999999999999999999999997 99999999999999988888665221 225
Q ss_pred HHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhh---hhhcccccchHHHHH
Q 007612 155 CLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTIL---GYFEDEGMWALGFWV 231 (596)
Q Consensus 155 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~---g~l~~~~~~~~~f~~ 231 (596)
+.++++|++.|++.+...+...+++.|++|+++ |++++++++.+.++|..+++.++ +...+..+||+.|++
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 678999999999999999999999999999999 99999999999999999999988 666677899999998
Q ss_pred HHHHHHHHHHHHHh
Q 007612 232 STGSAFAALVLFLA 245 (596)
Q Consensus 232 ~~~~~~~~~~~~~~ 245 (596)
.++..++.++..++
T Consensus 202 ~~~~~~~~~~~~~~ 215 (481)
T TIGR00879 202 QLIPAGLLFLGLFF 215 (481)
T ss_pred HHHHHHHHHHHHhc
Confidence 66555544444333
No 24
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=3.2e-23 Score=216.89 Aligned_cols=358 Identities=13% Similarity=0.051 Sum_probs=231.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 007612 46 ILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLL 125 (596)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~ 125 (596)
++...+............+|.|.. +++.++.+.+++.+...++..++.++.|+++||+ ||||+++++.++..++..++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 445556666666566666777765 5899999999999999999999999999999997 99999999988888877777
Q ss_pred HhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHH
Q 007612 126 SLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLAL 205 (596)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 205 (596)
.+....+ +.+.+.++++|++.|++.+...+...+++.|++|+++ |++.+++.+...
T Consensus 82 ~~~~~~~------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 137 (365)
T TIGR00900 82 PFVALLG------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVR 137 (365)
T ss_pred HHHHHcC------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHH
Confidence 7662111 1247889999999999999999999999999999988 999999999999
Q ss_pred hHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccc
Q 007612 206 NLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDL 285 (596)
Q Consensus 206 ~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 285 (596)
++|..++|.+++++.+..+|++.|++.++..++..+..+..+.+.+++++.++...+.
T Consensus 138 ~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 195 (365)
T TIGR00900 138 SLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAV---------------------- 195 (365)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhH----------------------
Confidence 9999999999999998899999998877655555444333222111100000000000
Q ss_pred hhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHH-HHHhHhHhhhhc
Q 007612 286 YVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPI-WLCTILYSVVFT 364 (596)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 364 (596)
.+ +.. ..++ ...+.+.+...... +.....+.....
T Consensus 196 ---------------------~~--~~~----------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (365)
T TIGR00900 196 ---------------------LR--DTR----------------EGIK-----FVLKNPLLRTLLLLALLFNLVFAPAIV 231 (365)
T ss_pred ---------------------HH--HHH----------------hHHH-----HHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 0000 00111112111111 111111111111
Q ss_pred cccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHH
Q 007612 365 QMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLA 444 (596)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~ 444 (596)
...+++..+..+.+.. ..+.+.....++.++..++.++ +.+|.+ +++.+..+..+.++++..
T Consensus 232 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----l~~~~~--------~~~~~~~~~~~~~~~~~~ 293 (365)
T TIGR00900 232 ALFPYVQSKYLGRGST------HYGWVLAAFGLGALLGALLLGL----LGRYFK--------RMALMTGAIFVIGLAILV 293 (365)
T ss_pred HHhHHHHHHHhCCchH------HHHHHHHHHHHHHHHHHHHHHH----HHHHhc--------hhHHHHHHHHHHHHHHHH
Confidence 1111221111111111 1122222333444444444443 333433 334455566666666555
Q ss_pred HHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHH
Q 007612 445 AGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSS 524 (596)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~ 524 (596)
..... + +.+...+..++.|++.+...+...++..+.+|++.||+++|+.++...++..+++
T Consensus 294 ~~~~~------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~ 354 (365)
T TIGR00900 294 VGLTP------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGL 354 (365)
T ss_pred HHhhc------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54421 1 2455666778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 007612 525 LLLTMVMK 532 (596)
Q Consensus 525 ~l~~~i~~ 532 (596)
.+.+.+.+
T Consensus 355 ~~~g~l~~ 362 (365)
T TIGR00900 355 ILAGPLAD 362 (365)
T ss_pred HHHHHHHH
Confidence 99997765
No 25
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.92 E-value=3.8e-23 Score=221.56 Aligned_cols=181 Identities=12% Similarity=0.056 Sum_probs=151.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
.+|+.++.+++..+++......+.... +.+++++|++..+.+++.+.+.++..+++++.|+++||+ |||+++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAG-LTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHH-HhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence 356666666666666666666554444 478899999999999999999999999999999999997 999999999999
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
..++.++++++ + +...+++.|++.|++.+...|....++.|++|+++ |+++
T Consensus 83 ~~~~~~~~~~~---~--------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~ 133 (412)
T TIGR02332 83 WGIASTATMFA---T--------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARA 133 (412)
T ss_pred HHHHHHHHHHh---c--------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHH
Confidence 99999988887 2 37789999999999999999999999999999998 9999
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcc------cccchHHHHHHHHHHHHHHHHHHhcCcc
Q 007612 198 FSYFYLALNLGSLFSNTILGYFED------EGMWALGFWVSTGSAFAALVLFLAGTTR 249 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~------~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 249 (596)
+++++.+..+|..+++.+++++.+ ..|||+.|++.++..++..++.++..++
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 134 NALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 999999999999999999988763 3699999998776655544444443333
No 26
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.92 E-value=4.4e-23 Score=217.56 Aligned_cols=154 Identities=19% Similarity=0.220 Sum_probs=136.1
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 007612 63 NLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNE 142 (596)
Q Consensus 63 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (596)
...+++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++..+++++ +
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~---~---------- 80 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFA---G---------- 80 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHH---c----------
Confidence 344567889999999999999999999999999999999997 99999999999988888888877 2
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc
Q 007612 143 LTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE 222 (596)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~ 222 (596)
+.+.++++|++.|++.+...+...+++.|++|+++ |++.+++.+...++|..++|.+++++.+.
T Consensus 81 ----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 144 (399)
T TIGR00893 81 ----------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWILIH 144 (399)
T ss_pred ----------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHHHh
Confidence 37889999999999999999999999999999998 99999999999999999999999998888
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhc
Q 007612 223 GMWALGFWVSTGSAFAALVLFLAG 246 (596)
Q Consensus 223 ~~~~~~f~~~~~~~~~~~~~~~~~ 246 (596)
.+|++.|++.++..++..+..+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 145 FSWQWAFIIEGVLGIIWGVLWLKF 168 (399)
T ss_pred CCchHHHHHHHHHHHHHHHHhhhe
Confidence 999999998776655554444433
No 27
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.92 E-value=7.1e-23 Score=222.19 Aligned_cols=154 Identities=9% Similarity=0.045 Sum_probs=123.7
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 007612 63 NLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNE 142 (596)
Q Consensus 63 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (596)
...+|+.++ |+++.+.+++.+.+.++..++++++|+++||+ |||++++++.++.+++.++++++...
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~----------- 116 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWA----------- 116 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhcc-----------
Confidence 344577777 99999999999999999999999999999997 99999999999888888877765110
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHH-HHhhhhhhhcc
Q 007612 143 LTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSL-FSNTILGYFED 221 (596)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~-~~~~i~g~l~~ 221 (596)
..+...+++.|++.|++.|...|.....+.+++|+++ |++++++++.+.++|+. .+|.++..+..
T Consensus 117 --------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 182 (452)
T PRK11273 117 --------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFLLGMAW 182 (452)
T ss_pred --------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 1236678889999999999888888889999999998 99999999999999875 45554333333
Q ss_pred cccchHHHHHHHHHHHHHHHHH
Q 007612 222 EGMWALGFWVSTGSAFAALVLF 243 (596)
Q Consensus 222 ~~~~~~~f~~~~~~~~~~~~~~ 243 (596)
..+|++.|++.++..++..++.
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~ 204 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFA 204 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHH
Confidence 4589999998776555443333
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=8.5e-23 Score=217.47 Aligned_cols=367 Identities=14% Similarity=0.034 Sum_probs=235.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhc
Q 007612 51 GLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSY 130 (596)
Q Consensus 51 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~ 130 (596)
+.....++.+.+.+| .+.+++|+|..+.+++.+.+.++..+++++.|+++||+ |||+++..+..+++++.++++++
T Consensus 19 ~~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a-- 94 (393)
T PRK09705 19 LNMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY-- 94 (393)
T ss_pred HHcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC--
Confidence 333333455555555 46789999999999999999999999999999999997 99999999999999999999988
Q ss_pred cccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHH
Q 007612 131 LFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSL 210 (596)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 210 (596)
++ +..++++|+++|++.+...+....++.+++| ++ |+++++.+..+.++|..
T Consensus 95 -~~--------------------~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~ 146 (393)
T PRK09705 95 -PQ--------------------SALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGG 146 (393)
T ss_pred -cc--------------------hHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHH
Confidence 33 7778999999999999999999999999986 66 89999999999999999
Q ss_pred HHhhhhhhhcccc-cchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcc
Q 007612 211 FSNTILGYFEDEG-MWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVID 289 (596)
Q Consensus 211 ~~~~i~g~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~ 289 (596)
+++.+++++.++. +|++.+.+.++..++.+...+...++.++++++ ++
T Consensus 147 ~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~------ 195 (393)
T PRK09705 147 LGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHK-------------------------TT------ 195 (393)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC-------------------------CC------
Confidence 9999999887764 899887665444333332222221111100000 00
Q ss_pred cCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhccccce
Q 007612 290 ANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFTQMASL 369 (596)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (596)
..+.+ ..++.+.+...+........+.....+.+.+
T Consensus 196 ---------------------------------------~~~~~-----~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~ 231 (393)
T PRK09705 196 ---------------------------------------TTPVR-----VVFTPRAWTLGVYFGLINGGYASLIAWLPAF 231 (393)
T ss_pred ---------------------------------------cCCcc-----cccCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0011111111122222233333333333333
Q ss_pred eEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 007612 370 FVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVE 449 (596)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~ 449 (596)
+.+ .+.+.. ..+.......++.++...+.++ +.||.+ +++.+.++..+..++...+....
T Consensus 232 l~~--~g~s~~------~ag~~~~~~~i~~i~g~~~~g~----l~~r~~--------~~~~~~~~~~l~~~~~~~~~~~~ 291 (393)
T PRK09705 232 YIE--IGASAQ------YSGSLLALMTLGQAAGALLMPA----MARHQD--------RRKLLMLALVLQLVGFCGFIWLP 291 (393)
T ss_pred HHH--cCCChh------hhhHHHHHHHHHHHHHHHHHHH----HHhhcc--------chHHHHHHHHHHHHHHHHHHHcc
Confidence 321 122211 1222333334444555555553 344443 23345666666666655443221
Q ss_pred hhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 450 CYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAP-DGLKSFGSALCMTSISLGNYVSSLLLT 528 (596)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P-~~~rg~~~gl~~~~~~lg~~lg~~l~~ 528 (596)
.+...+ ..++.+++.+...+.......+..+ ++.+|+..|+.+....++..++|.+.+
T Consensus 292 -------------------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G 350 (393)
T PRK09705 292 -------------------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSG 350 (393)
T ss_pred -------------------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 2244567777777777767777775 678999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhccccccc
Q 007612 529 MVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKCI 580 (596)
Q Consensus 529 ~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~ 580 (596)
.+.+.+ +++...|.+.+..+++..+..+.+.++++.+
T Consensus 351 ~l~~~~---------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 351 VLRSIS---------------GNYLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred HHHHHh---------------CCchHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 887643 2245567777777777777767766666444
No 29
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.92 E-value=4.1e-23 Score=220.52 Aligned_cols=379 Identities=14% Similarity=0.064 Sum_probs=241.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHH-----HHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAE-----AANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG 116 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~-----~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~ 116 (596)
....+.+..++....+....+++|.|++ ++|.+..+ .+++.+...+...++.++.|+++||+ |||++++++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 92 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHH
Confidence 4556666777778888888888888875 58888654 37888889999999999999999997 99999999988
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
+..++.+++.+. .+.+.+++.|++.|++.+ ..+...+++.+.+|+++ |++
T Consensus 93 ~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~ 142 (408)
T PRK09874 93 GMGIVMVLMGLA-----------------------QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SGW 142 (408)
T ss_pred HHHHHHHHHHHH-----------------------hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hhH
Confidence 888887777665 237778899999998855 45778888999999888 999
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhcc
Q 007612 197 FFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRV 276 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (596)
+.++.+...++|..++|.+++.+.+..+|++.|++.++..++..+..+...++.++..++++. ..
T Consensus 143 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------- 207 (408)
T PRK09874 143 ALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM-LH-------------- 207 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh-hH--------------
Confidence 999999999999999999999998888999999988766555544443333221110000000 00
Q ss_pred ccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHH-HHHH
Q 007612 277 HLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLP-IWLC 355 (596)
Q Consensus 277 ~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 355 (596)
..+.. + ..++.+.++.... ....
T Consensus 208 --------------------------------~~~~~-------------------~-----~~~~~~~~~~~~~~~~~~ 231 (408)
T PRK09874 208 --------------------------------MREVV-------------------T-----SLKNPKLVLSLFVTTLII 231 (408)
T ss_pred --------------------------------HHHHH-------------------H-----hCcCCchHHHHHHHHHHH
Confidence 00000 0 0000111111111 1111
Q ss_pred hHhHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHH
Q 007612 356 TILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGL 435 (596)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~ 435 (596)
..........++.+..... ..... .....+.+..+..++.++..+..+++ .+|.+ +++.+..+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~g~~~~~~~l~~~~~~~~~g~l----~dr~g--------~~~~~~~~~ 295 (408)
T PRK09874 232 QVATGSIAPILTLYVRELA-GNVSN---IAFISGMIASVPGVAALLSAPRLGKL----GDRIG--------PEKILITAL 295 (408)
T ss_pred HHHHHHHHHHHHHHHHHHh-ccchH---HHHHHHHHHHHHHHHHHHHHHHHHHH----Hhccc--------cchhHHHHH
Confidence 1111111111111100000 00000 00001111122233334444444544 44443 223355566
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHH
Q 007612 436 VIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTS 515 (596)
Q Consensus 436 ~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~ 515 (596)
.+..++++..... .+.+.+.+..++.|++.+...+...++..+..|++.+|+..|+.+..
T Consensus 296 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (408)
T PRK09874 296 IFSVLLLIPMSFV--------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSF 355 (408)
T ss_pred HHHHHHHHHHHHh--------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHH
Confidence 5555555444332 13444556667889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcc
Q 007612 516 ISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAK 575 (596)
Q Consensus 516 ~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~ 575 (596)
..+|..+|+.+.+.+.+ ..+++..|++.+++.+++.+..+...+
T Consensus 356 ~~~g~~~gp~~~G~l~~----------------~~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 356 RDIGNVTGPLMGAAISA----------------NYGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHhhHHHHHHHHh----------------hcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997764 223567888888888887776655443
No 30
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=2.3e-22 Score=214.19 Aligned_cols=174 Identities=13% Similarity=0.116 Sum_probs=149.9
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHH
Q 007612 36 KSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQ 115 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~ 115 (596)
.|+.|+.++.+.+..++.....|.....+|. +.+++|+++.+.++..+.+.++..++.++.|+++||+ |||++++++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~ 92 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFA 92 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHH
Confidence 3456776666666666666666666666665 4578999999999999999999999999999999997 9999999999
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 116 GIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
++.+++.+++.++ .+.+.+++.|+++|++.+...+...+++.|++|+++ |+
T Consensus 93 ~~~~~~~~~~~~~-----------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~ 143 (394)
T PRK10213 93 VLLTLSCLLVSFA-----------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VP 143 (394)
T ss_pred HHHHHHHHHHHHH-----------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HH
Confidence 9999988888776 238889999999999999999999999999999988 99
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHH
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAAL 240 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~ 240 (596)
++.++...+.++|..++|.+++++.+..+|++.|++.++..++..
T Consensus 144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 144 KALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998999999998765544433
No 31
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.92 E-value=1.7e-22 Score=217.86 Aligned_cols=174 Identities=17% Similarity=0.151 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CChHHHHHHHHHH---HHHHHHHhhhHHHHhhhccCchHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQ---QNNAEAANNVSKW---TGTVYIFSLVGAFLSDSYWGRFKTCAIFQ 115 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~~~~~~~~~~~~~---~~~~~i~~~~~G~laDr~~Gr~~~l~~~~ 115 (596)
.+....+..+.+.+.... .+++.+++.++++ .+..+.+...+.+ .++..++++++|+++||+ ||||++.++.
T Consensus 23 ~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~ 100 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISV 100 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHH
Confidence 344444556666666555 4556667887774 5555544444444 444459999999999997 9999999999
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 116 GIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
+++.++.++++++.+...+ .......+++.|+++|++.|+..|...++++|++|+++ |+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg 159 (432)
T PRK10406 101 CMMCFGSLVIACLPGYETI---------------GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KG 159 (432)
T ss_pred HHHHHHHHHHhhcCCchhH---------------HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------cc
Confidence 9999999998887221100 00124578899999999999999999999999999998 99
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhhc--------ccccchHHHHHHHHHHHH
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYFE--------DEGMWALGFWVSTGSAFA 238 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l~--------~~~~~~~~f~~~~~~~~~ 238 (596)
+..++.+.+.+.|..+++.+...+. +.+|||++|++.++..++
T Consensus 160 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll 210 (432)
T PRK10406 160 FYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVV 210 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH
Confidence 9999988888888888876654443 257999999986665443
No 32
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=2e-22 Score=212.25 Aligned_cols=350 Identities=12% Similarity=0.073 Sum_probs=213.3
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCC
Q 007612 64 LVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNEL 143 (596)
Q Consensus 64 l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (596)
..+.+++++|+|+.+.+++.+.+.++..+++++.|+++||+ |||++++.+......+.......
T Consensus 13 ~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~--------------- 76 (368)
T TIGR00903 13 VLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGRLLDP--------------- 76 (368)
T ss_pred hHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHHh---------------
Confidence 33456789999999999999999999999999999999997 99987765544444433212211
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccc
Q 007612 144 TPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEG 223 (596)
Q Consensus 144 ~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~ 223 (596)
.+...++++|+++|++.+.. +.....++|++|+++ |++++++.+.+..+|..+++.+++++.+..
T Consensus 77 --------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~ 141 (368)
T TIGR00903 77 --------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGLKIYTAG 141 (368)
T ss_pred --------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 23788999999999999864 566666799999988 999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCcccc
Q 007612 224 MWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLH 303 (596)
Q Consensus 224 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~ 303 (596)
|||+.|++.++..++..++.+...|+.++.+++... .
T Consensus 142 gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~-------------------------------------------~ 178 (368)
T TIGR00903 142 GLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFG-------------------------------------------F 178 (368)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcc-------------------------------------------h
Confidence 999999986665544444333332221111000000 0
Q ss_pred ccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhccccceeEeeeccccccccc
Q 007612 304 THGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSN 383 (596)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (596)
. +.. + +++ +..+++..+......++....++....+.++++.. .+.+..
T Consensus 179 ~---~~~-~------------------~~~----~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~--~g~s~~--- 227 (368)
T TIGR00903 179 K---DAV-K------------------EFG----ALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP--AGLEDI--- 227 (368)
T ss_pred H---HHH-H------------------HHH----HHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCChH---
Confidence 0 000 0 000 00111222233333444455555555666665532 112211
Q ss_pred cccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCC
Q 007612 384 FRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHC 463 (596)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~ 463 (596)
..... .+..+........+.++..|| + + +...+....++.++.....+..
T Consensus 228 ----~~~~~---~l~~~~g~~g~~~~~d~~~r~-~-~------r~~~~~~~~~~~a~~~~~~~~~--------------- 277 (368)
T TIGR00903 228 ----AGDAV---ALAILAGLIGVAVIPDRVARA-G-L------RSIYIRAAALLIAAFFLALAFE--------------- 277 (368)
T ss_pred ----HHHHH---HHHHHHHHHHHHHhhHHhhhh-h-h------HHHHHHHHHHHHHHHHHHHHHc---------------
Confidence 11111 111111111122232232222 1 1 1122222333333333333321
Q ss_pred CCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 007612 464 EGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWV 543 (596)
Q Consensus 464 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~ 543 (596)
.+....+..+.+.++......+..+++..|.+|++.||+++|+.+..+++|+..++.+.+.+..
T Consensus 278 -----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~----------- 341 (368)
T TIGR00903 278 -----LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS----------- 341 (368)
T ss_pred -----cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-----------
Confidence 1222333344555566666667788999999999999999999999999999999998886541
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 007612 544 PGNLNKGHLDRFYFLLAGLTTVDFVVYI 571 (596)
Q Consensus 544 ~~~~~~~~~~~~f~~~a~i~~i~~~~~~ 571 (596)
+.+..|.++++..+++.+..+
T Consensus 342 -------~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 342 -------SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHH
Confidence 234578888888888776654
No 33
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.92 E-value=5.2e-23 Score=218.37 Aligned_cols=403 Identities=12% Similarity=0.047 Sum_probs=250.6
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHH
Q 007612 80 ANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYL 159 (596)
Q Consensus 80 ~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 159 (596)
+.+++++.++.++++.++|.++||+ |||..+.+..++..++.+++.++...++ ..++++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~~--------------------~e~li~ 121 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAPS--------------------FEMLIL 121 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhhh--------------------HHHHHH
Confidence 6677788999999999999999997 9999999999998888888887755444 889999
Q ss_pred HHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhh-h-hcccccchHHHHHHHHHHH
Q 007612 160 SIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILG-Y-FEDEGMWALGFWVSTGSAF 237 (596)
Q Consensus 160 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g-~-l~~~~~~~~~f~~~~~~~~ 237 (596)
+|++.|+..|......+.++.|..|++. ||....+...+.++|..++..++. . +-....|.+.+.+..+..+
T Consensus 122 GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~ 195 (485)
T KOG0569|consen 122 GRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPAL 195 (485)
T ss_pred HHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999965554 2 3345568888887776665
Q ss_pred HHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchh-cccCCCCCCCCCccccccccchhhhhhhh
Q 007612 238 AALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYV-IDANDSSTNGNRNMLHTHGFKFLDRAAYI 316 (596)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (596)
+.++...+ .||||+++.. +++.++|.+.++..+..++.+..+.....
T Consensus 196 ~~l~~l~~--------------------------------~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~ 243 (485)
T KOG0569|consen 196 LQLALLPF--------------------------------LPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLR 243 (485)
T ss_pred HHHHHHhc--------------------------------CCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHH
Confidence 55554433 8999999988 67777777777776655432211111000
Q ss_pred ccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhccccceeEeeeccccccccccccC-Cccccccc
Q 007612 317 SSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSNFRIP-PASMSSFD 395 (596)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 395 (596)
+.++ ++++..+...++...+. -..++.....+.+.+.+..-......+++..... +. |+... ....+...
T Consensus 244 e~~~-~~~~~~~~~sl~~~~~~-~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~----~a---G~~~~~a~~an~~~ 314 (485)
T KOG0569|consen 244 EIEE-EELEKKKQISLRQLLKN-PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFK----TA---GFTPEEAQYANLGI 314 (485)
T ss_pred HHHH-hccccccCCcHHHHhcC-cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHH----Hc---CCCHHHHHHHHHHH
Confidence 0000 00111111122110000 0112222111212222111111111111111100 00 11111 11112222
Q ss_pred hhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHH
Q 007612 396 ILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQV 475 (596)
Q Consensus 396 ~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (596)
....++...+...+++ |.+ || ..++++..++.+..+++.......... .++-.+..+
T Consensus 315 g~v~~~~t~~~~~lid----~~g-RR-------pLll~~~~~~~~~~~~~~~~~~l~~~~-----------~~~~~y~~i 371 (485)
T KOG0569|consen 315 GIVNLLSTLVSPFLID----RLG-RR-------PLLLISLSLMAVALLLMSIALFLSNSF-----------GSWLSYLCI 371 (485)
T ss_pred HHHHHHHHHHHHHHHH----hcC-Cc-------HHHHHHHHHHHHHHHHHHHHHHHHHHh-----------hhHHHHHHH
Confidence 2223333333333333 444 32 346677776666665554433221000 001111223
Q ss_pred HHHHHHHHHHHhh-hhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhH
Q 007612 476 PQYALIGASEVFM-YVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDR 554 (596)
Q Consensus 476 ~~~~l~g~~~~~~-~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 554 (596)
...+++.++..+. .|..+-+.+|.+|++.|+.++++..+.+++.+++-......+.+.. +. +
T Consensus 372 ~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~---------------g~--~ 434 (485)
T KOG0569|consen 372 AAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI---------------GP--Y 434 (485)
T ss_pred HHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cc--h
Confidence 3344444444444 5888889999999999999999999999999999888888776533 11 4
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccchhhhhhhcc
Q 007612 555 FYFLLAGLTTVDFVVYIACAKWYKCIELEAKCAESN 590 (596)
Q Consensus 555 ~f~~~a~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (596)
+|..+++.+++.++..+...||+|+|+.++..++.+
T Consensus 435 ~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 435 VFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred hhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence 788889999999999999999999998877655433
No 34
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.92 E-value=3.1e-22 Score=219.41 Aligned_cols=175 Identities=17% Similarity=0.095 Sum_probs=128.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHH-HHH-----HHHHHHHHHHHHhhhHHHHhhhccCchHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAE-AAN-----NVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAI 113 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~-~~~-----~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~ 113 (596)
++.++...+..+++.+.+..+ .+..+++.+.++.+..+ ..+ ..++..++..+++++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVY-GFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 345566667777777666554 44556777777533211 122 24666788899999999999997 99999999
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccc
Q 007612 114 FQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHS 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 193 (596)
+.++++++.++++++.+...+. -..+..++++|+++|++.|+..+...++++|++|+++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g---------------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------ 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIG---------------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------ 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHH---------------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------
Confidence 9999999999999882211000 0001248899999999999999999999999999998
Q ss_pred hhhHHHHHHHHHhHHHHHHhhhhhhhc--------ccccchHHHHHHHHHHH
Q 007612 194 KVAFFSYFYLALNLGSLFSNTILGYFE--------DEGMWALGFWVSTGSAF 237 (596)
Q Consensus 194 r~~~~~~~~~~~~lg~~~~~~i~g~l~--------~~~~~~~~f~~~~~~~~ 237 (596)
|++..++...+..+|..+|+.+...+. ..+|||+.|++.++..+
T Consensus 152 Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 152 RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHH
Confidence 999999988888888887775544332 25799999998665433
No 35
>PRK09952 shikimate transporter; Provisional
Probab=99.92 E-value=4.2e-22 Score=215.16 Aligned_cols=175 Identities=15% Similarity=0.099 Sum_probs=129.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCChHHHHHHHH-----HHHHHHHHHhhhHHHHhhhccCchHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVL--QQNNAEAANNVS-----KWTGTVYIFSLVGAFLSDSYWGRFKTC 111 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--g~~~~~~~~~~~-----~~~~~~~i~~~~~G~laDr~~Gr~~~l 111 (596)
++|.++..++..+.+.+....+....+.++.+++ +.++.+ +++.+ ...++..++.++.|+++||+ |||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l 97 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHH
Confidence 3456666667777777766655555555666554 676663 44432 33455668888899999997 999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccc
Q 007612 112 AIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEG 191 (596)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 191 (596)
+++.+++.++.++++++.+...+ .......++++|+++|++.|+..+....++.|++|+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~---- 158 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTI---------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK---- 158 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHH---------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC----
Confidence 99999999999999987221100 00012258889999999999999999999999999988
Q ss_pred cchhhHHHHHHHHHhHHHHHHhhhhhhhc--------ccccchHHHHHHHHHH
Q 007612 192 HSKVAFFSYFYLALNLGSLFSNTILGYFE--------DEGMWALGFWVSTGSA 236 (596)
Q Consensus 192 ~~r~~~~~~~~~~~~lg~~~~~~i~g~l~--------~~~~~~~~f~~~~~~~ 236 (596)
|++..+..+.+..+|..++..+..++. +.+|||++|++.++..
T Consensus 159 --rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~ 209 (438)
T PRK09952 159 --KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLV 209 (438)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHH
Confidence 999999888888999888877666554 2579999998876543
No 36
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=3.3e-22 Score=213.76 Aligned_cols=174 Identities=11% Similarity=0.044 Sum_probs=139.9
Q ss_pred chHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH
Q 007612 40 WVAGIIILLNQGLATLAF---FGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG 116 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~---~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~ 116 (596)
.+..++.++....+...+ ..+.+.++. +.+++|.+..+.++..+.+.++..++.++.|+++||+ ||||+++++..
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~ 86 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVA 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 334444444444444433 334444443 5578999999999999999999999999999999997 99999999998
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
+..++.+++.++ + +.+.+++.|++.|++.+...+...+.+.|.+|+++ |.+
T Consensus 87 ~~~~~~~~~~~~---~--------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~ 137 (406)
T PRK15402 87 FFILTCLAILLA---Q--------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIK 137 (406)
T ss_pred HHHHHHHHHHHH---c--------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHH
Confidence 888888887776 2 37778899999999999888889999999999888 888
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHH
Q 007612 197 FFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~ 244 (596)
..++.+....+|..++|.+++++.+..+|++.|++.++..++..+..+
T Consensus 138 ~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 138 ITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 899988888899999999999998888999999887766655544433
No 37
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.91 E-value=1e-22 Score=221.02 Aligned_cols=375 Identities=11% Similarity=-0.009 Sum_probs=222.4
Q ss_pred HHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCC
Q 007612 66 LFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTP 145 (596)
Q Consensus 66 ~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (596)
..+.+++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++.+.++..++.++++++.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 345679999999999999999999999999999999997 999999999988888888887762
Q ss_pred CCCCCchhHHHHHH-HHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccccc
Q 007612 146 CGTHSSLEICLFYL-SIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGM 224 (596)
Q Consensus 146 ~~~~~~~~~~~l~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~ 224 (596)
+.+.+++ .|++.|++.+...+...+++.++++ ++ |+++.++.+.+.++|..++|.+++++.+.+|
T Consensus 106 -------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g 171 (455)
T TIGR00892 106 -------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESFG 171 (455)
T ss_pred -------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhC
Confidence 2555544 4688899998776777788889885 66 9999999999999999999999999999899
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCccccc
Q 007612 225 WALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHT 304 (596)
Q Consensus 225 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 304 (596)
||++|++.+++.++..+..++..+..+..+.... ++.+ ..+.+ .. .++....
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------------------~~~~----~~~~~--~~-~~~~~~~ 223 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKS---------------------KSKE----GLPPD--GS-TKKLSKK 223 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCcccccccc---------------------cccc----cCCCC--Cc-ccccccc
Confidence 9999999887666554444433322110000000 0000 00000 00 0000000
Q ss_pred cccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhH-HHHHHhHhHhhhhccccceeEeeeccccccccc
Q 007612 305 HGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLL-PIWLCTILYSVVFTQMASLFVEQGAAMKTTVSN 383 (596)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (596)
...+ ...++. . ....+.+..+... ..++....+......++.+... .+.+..
T Consensus 224 ~~~~-------------------~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--~g~s~~--- 276 (455)
T TIGR00892 224 STAE-------------------KINRFL--D-FSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD--KGVDEY--- 276 (455)
T ss_pred chhh-------------------hhhhhc--c-hHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH--cCCCHH---
Confidence 0000 000000 0 0001112222111 1111111111111111111110 111111
Q ss_pred cccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCC
Q 007612 384 FRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHC 463 (596)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~ 463 (596)
..+.+..+..++.++..++.+++.++. +.. + .+...+..+.++.+++++.....
T Consensus 277 ---~~g~~~~~~~~~~~~~~~~~g~l~d~~--~~~---~---~~~~~~~~~~~~~~l~~ll~~~~--------------- 330 (455)
T TIGR00892 277 ---EAAFLLSIIGFVDIFARPSCGLIAGLK--WIR---P---HVQYLFSFALLFNGLTHLLCALA--------------- 330 (455)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhccc--ccC---H---HHHHHHHHHHHHHHHHHHHHHHh---------------
Confidence 122233333444455555555443321 010 0 01222333334333433333221
Q ss_pred CCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 007612 464 EGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWV 543 (596)
Q Consensus 464 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~ 543 (596)
.+.+++++..++.|++.+...+..++++.+.+|++.+|+++|++++...+|+.+|+.+.+.+.+..
T Consensus 331 -----~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~--------- 396 (455)
T TIGR00892 331 -----GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDAT--------- 396 (455)
T ss_pred -----chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhc---------
Confidence 245556667788899998888999999999999999999999999999999999999999665421
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHHh
Q 007612 544 PGNLNKGHLDRFYFLLAGLTTVDFVVYIA 572 (596)
Q Consensus 544 ~~~~~~~~~~~~f~~~a~i~~i~~~~~~~ 572 (596)
++++..|+..+++.+++.+..++
T Consensus 397 ------g~~~~~f~~~~~~~li~~~~~~~ 419 (455)
T TIGR00892 397 ------KNYKYIFYASGSIVVSAGLFLAI 419 (455)
T ss_pred ------CCcchHHHHhhHHHHHHHHHHHH
Confidence 23456777777776666554443
No 38
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=2.1e-22 Score=216.49 Aligned_cols=164 Identities=15% Similarity=0.185 Sum_probs=142.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
++.+....+..+......+.. .+...++.+++|.++.+.+++.+.+.++..+++++.|+++||+ |||+++.++.++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~ 94 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 345555666666666666554 4444567789999999999999999999999999999999997 99999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
++.++++++ ++.+.++++|++.|++.|...+....++.|.+|+++ |+++.+
T Consensus 95 ~~~~~~~~~-----------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~~ 145 (426)
T PRK12307 95 VGTGLSGLA-----------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKASA 145 (426)
T ss_pred HHHHHHHHH-----------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhhh
Confidence 999888877 337889999999999999999999999999999998 999999
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHH
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTG 234 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~ 234 (596)
+++.+..+|.++++.+.+.+.+..+|++.|++...
T Consensus 146 ~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 146 FLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 99999999999999999999888999999987544
No 39
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=1.4e-22 Score=215.39 Aligned_cols=172 Identities=16% Similarity=0.183 Sum_probs=148.0
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH
Q 007612 37 SGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG 116 (596)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~ 116 (596)
+.+++.+....+..+......+.+....+ .+++++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 45667777788888888877776655555 56789999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
+.+++.+++.++ + ++..+++.|++.|++.+...+...+++.|++|+++ |++
T Consensus 86 ~~~~~~~~~~~~---~--------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~ 136 (405)
T TIGR00891 86 LFSAGTLACGFA---P--------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RNK 136 (405)
T ss_pred HHHHHHHHHHHh---c--------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hhH
Confidence 888888888776 2 37788999999999999999999999999999988 999
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhccccc--chHHHHHHHHHHHHH
Q 007612 197 FFSYFYLALNLGSLFSNTILGYFEDEGM--WALGFWVSTGSAFAA 239 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i~g~l~~~~~--~~~~f~~~~~~~~~~ 239 (596)
+.++.+.+.++|..+++.+++.+.+..+ |++.|++.++..++.
T Consensus 137 ~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 137 ASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 9999999999999999999998877665 999998765444433
No 40
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.91 E-value=1.1e-22 Score=213.68 Aligned_cols=365 Identities=10% Similarity=0.002 Sum_probs=226.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 007612 49 NQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLS 128 (596)
Q Consensus 49 ~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~ 128 (596)
.........|.+.. +.+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++.++
T Consensus 11 ~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~ 88 (377)
T TIGR00890 11 IMCFTSGYVYTWTL-LAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIA 88 (377)
T ss_pred HHHHHhhHHhhhhh-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHH
Confidence 33333333555544 45677889999999999999999999999999999999997 99999999999999999888887
Q ss_pred hccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHH
Q 007612 129 SYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLG 208 (596)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 208 (596)
.+.+.++++|++.|++.+...+.....+.+++| ++ |+++.++...+.++|
T Consensus 89 -----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g 138 (377)
T TIGR00890 89 -----------------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLG 138 (377)
T ss_pred -----------------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchh
Confidence 347889999999999999888888888888886 45 889999999999999
Q ss_pred HHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhc
Q 007612 209 SLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVI 288 (596)
Q Consensus 209 ~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~ 288 (596)
..+++.+.+.+.+..+|++.|++.++..++..+..+...++.++++.+++. +.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~------- 191 (377)
T TIGR00890 139 SFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNI--------------------EV------- 191 (377)
T ss_pred HhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCc--------------------cc-------
Confidence 888776777777778999999987766555544433332221110000000 00
Q ss_pred ccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhccccc
Q 007612 289 DANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFTQMAS 368 (596)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (596)
. .... +.. +..++++.+......+..............
T Consensus 192 -------------~-~~~~---~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (377)
T TIGR00890 192 -------------S-VKDY---TVW------------------------EMLRTPQFWVLYLSFFLNAVSGLLLIGLYK- 229 (377)
T ss_pred -------------c-hhhh---hHH------------------------HHHcCccHHHHHHHHHHHhHHHHHHHHHHH-
Confidence 0 0000 000 000011111111111111111111111111
Q ss_pred eeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 007612 369 LFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIV 448 (596)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~ 448 (596)
.+.. ..+.+. .....+.....+..++..++.+++.+ |.+ +++.+.++..+.+++++.....
T Consensus 230 ~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g--------~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
T TIGR00890 230 PYGQ-SLGLSD------GFLVLAVSISSIFNGGGRPFLGALSD----KIG--------RQKTMSIVFGISAVGMAAMLFI 290 (377)
T ss_pred HHHH-HcCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHH----HHh--------hhhhhhHHHHHHHHHHHHHHHc
Confidence 1111 011110 01122333334445555555565544 433 2223566666666666555442
Q ss_pred HhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 449 ECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLT 528 (596)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~ 528 (596)
. ..+....+...++.+++.+...+...+++.|.+|++.||++.|+.+....+|+.+++.+.+
T Consensus 291 ~------------------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g 352 (377)
T TIGR00890 291 P------------------MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIAS 352 (377)
T ss_pred c------------------cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 1 1122223334455666666666777788999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 007612 529 MVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDF 567 (596)
Q Consensus 529 ~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~ 567 (596)
.+.+. .+++..|++.+++++++.
T Consensus 353 ~l~~~----------------~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 353 HALTE----------------IGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHhh----------------hchhhHHHHHHHHHHHhc
Confidence 77652 234567777666666543
No 41
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.91 E-value=3.9e-22 Score=210.19 Aligned_cols=169 Identities=15% Similarity=0.027 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHH-HHHHHHHHHHHH
Q 007612 47 LLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAI-FQGIFVIGLVLL 125 (596)
Q Consensus 47 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~-~~~~~~~~~~~~ 125 (596)
.+..++...+.....+.++.|+++++|.|+.+.+++.+.+.+...+..++.|+++||+ ||||.+++ +.+...++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 3456677777778889999999999999999999999999999999999999999997 99887655 444555555666
Q ss_pred HhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH--HHHHHH
Q 007612 126 SLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF--FSYFYL 203 (596)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~ 203 (596)
.++ ++++.+++.|++.+.+.+...|...++..|..|++. |... .+..+.
T Consensus 82 ~~~-----------------------~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~ 132 (375)
T TIGR00899 82 AWN-----------------------RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRA 132 (375)
T ss_pred Hhc-----------------------chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHH
Confidence 655 236778888888887777778888888888877665 5543 577778
Q ss_pred HHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 204 ALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 204 ~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
..++|..++|.+++++.+..+|++.|++.++..++..+..+.
T Consensus 133 ~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 133 QISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998899999999887765555444433
No 42
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=1.9e-22 Score=220.44 Aligned_cols=402 Identities=13% Similarity=0.084 Sum_probs=242.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGL 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~ 122 (596)
+..+++..+............+| ++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.++++.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIP-TIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 44455555555555544444444 56678999999999999999999999999999999997 99999999999999999
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFY 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (596)
++++++ + +...++++|+++|++.+...+...+++.|.+|+++ |++++++++
T Consensus 82 ~~~~~~---~--------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~ 132 (485)
T TIGR00711 82 LLCGVA---P--------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWG 132 (485)
T ss_pred HHHhCc---C--------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHH
Confidence 888876 2 37789999999999999999999999999999998 999999999
Q ss_pred HHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHH-HHHH-HHHHHhhccccCC
Q 007612 203 LALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARF-CQVI-VAATKKWRVHLSA 280 (596)
Q Consensus 203 ~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~p~ 280 (596)
....+|..++|.+++++.++.+|++.|++.....++..++.....++.++++.++...... .... ...... .....+
T Consensus 133 ~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~-~~~~~~ 211 (485)
T TIGR00711 133 LTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLY-GLSEGP 211 (485)
T ss_pred HHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHH-HHhhCC
Confidence 9999999999999999999999999999877665555544444333322111111111100 0000 000000 000000
Q ss_pred CcccchhcccCCCCCCCCCccccccccch-hhhh-hhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHh
Q 007612 281 EGEDLYVIDANDSSTNGNRNMLHTHGFKF-LDRA-AYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTIL 358 (596)
Q Consensus 281 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (596)
...|. ........ .... ...... ..+...+.|... ....++++.....+..+.....
T Consensus 212 ~~~~~----------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 270 (485)
T TIGR00711 212 ERGWF----------------DSNEILILSITGLVAIIAFV---VWELTDDNPLVD--LRLFKYRNFTIGCVYMSLLGLG 270 (485)
T ss_pred CCCCC----------------CchHHHHHHHHHHHHHHHHH---HHHHcCCCCccC--HHHHcCCChHHHHHHHHHHHHH
Confidence 00000 00000000 0000 000000 000001111110 0011111111111112222222
Q ss_pred HhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHH
Q 007612 359 YSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIA 438 (596)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~ 438 (596)
+.......+. +.++..+.+.. ..+.......++.++..++.+++ .+|.+ +++.+.+|..+.
T Consensus 271 ~~~~~~~~p~-~~~~~~g~s~~------~~g~~~~~~~~~~~~~~~~~g~l----~~r~~--------~~~~~~~g~~~~ 331 (485)
T TIGR00711 271 LYGSFYLLPL-YLQQVLGYTAL------QAGLHILPVGLAPMLSSPIAGRM----GDKID--------PRKLVTIGLILY 331 (485)
T ss_pred HHHHHHHHHH-HHHHhcCCCHH------HHHHHHHHHHHHHHHHHHHHHHH----HhhcC--------cHHHHHHHHHHH
Confidence 2222222221 11111111111 12233333445555566666644 34443 334567777777
Q ss_pred HHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 007612 439 IVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISL 518 (596)
Q Consensus 439 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~l 518 (596)
+++...+.+.. .+..+.+......++.|++.+...++......+..|++.+|+++|+.++.+.+
T Consensus 332 ~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 395 (485)
T TIGR00711 332 AVGFYWRAFTF----------------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQL 395 (485)
T ss_pred HHHHHHHhccC----------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHH
Confidence 77776655211 11234455566678899999998888888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 007612 519 GNYVSSLLLTMVMK 532 (596)
Q Consensus 519 g~~lg~~l~~~i~~ 532 (596)
|+.+|+.+.+.+.+
T Consensus 396 g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 396 GGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999997765
No 43
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=4.3e-23 Score=210.04 Aligned_cols=403 Identities=14% Similarity=0.063 Sum_probs=253.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVN---LVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~---l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
-+.+++..+.....+|.+.-. ..+++.++.++|..|.|.+.+.+.+.+.++..+.|.++||. +.|+.+.+++++.+
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsa 105 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHH
Confidence 355666666666777766543 34678889999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
+..++++++. +...+.+..++.|...|.-.|.+...+..++|+++ ||+..+
T Consensus 106 i~nil~Gfs~-----------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~s 156 (448)
T COG2271 106 IVNILFGFSP-----------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWWS 156 (448)
T ss_pred HHHHHHhhhh-----------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceEE
Confidence 9999999982 37788888899999999999999999999999999 999999
Q ss_pred HHHHHHhHHHHHHhhhh--hhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccc
Q 007612 200 YFYLALNLGSLFSNTIL--GYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVH 277 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~--g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (596)
+.+.+-|+|+.+.|++. +++..+++|+..|+++++++++..++.+...+..+++..-++. +.
T Consensus 157 iWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~i-e~--------------- 220 (448)
T COG2271 157 IWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPI-EE--------------- 220 (448)
T ss_pred EehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCH-HH---------------
Confidence 99999999999999999 8999889999999999987766655555444432222110000 00
Q ss_pred cCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhH
Q 007612 278 LSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTI 357 (596)
Q Consensus 278 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (596)
..+++.+.++. + ++.+....+....+-+-+.|.++.. .+....
T Consensus 221 ~~~d~~e~~~~----------------------------------~-~~~~~ls~~~i~~~YVL~Nk~iW~l--a~a~vf 263 (448)
T COG2271 221 YRGDPLEIYEE----------------------------------E-KENEGLTAWQIFVKYVLKNKLIWLL--ALANVF 263 (448)
T ss_pred hhcCchhhhhh----------------------------------h-ccCCCccHHHHHHHHHHcChHHHHH--HHHHHH
Confidence 01111111000 0 0000000000000001111222211 112222
Q ss_pred hHhhhh--ccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHH
Q 007612 358 LYSVVF--TQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGL 435 (596)
Q Consensus 358 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~ 435 (596)
+|.+-+ ....+.|..+..+++.. ...........+.+....+.+++.|++.+.. |. ..-.+.+
T Consensus 264 vYivR~gi~dW~p~YL~e~k~~s~~------~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr--R~-------p~~~i~~ 328 (448)
T COG2271 264 VYVVRYGINDWGPLYLSEVKGFSLV------KANWAISLFEVAGLPGTLLAGWLSDKLFKGR--RG-------PMALIFM 328 (448)
T ss_pred HHHHHHHHhhhHHHHHHHhcCCCHH------HHHHHHHHHHHHhhHHHHHHHHHHHHhcccc--cc-------hHHHHHH
Confidence 222222 11223334333444432 1222333345666777777787777776431 11 1223333
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHH
Q 007612 436 VIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTS 515 (596)
Q Consensus 436 ~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~ 515 (596)
++..++++.+... +..+.+.....++.+|+..-.-.-..-....|..|++..|++.|+...+
T Consensus 329 ~~i~~~~~~~w~~------------------~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf 390 (448)
T COG2271 329 LLITASLVLYWLA------------------PNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLF 390 (448)
T ss_pred HHHHHHHHHHHcC------------------CCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhH
Confidence 3444444444332 1124444445555555433222222234677999999999999999999
Q ss_pred HHH-HHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccc
Q 007612 516 ISL-GNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWY 577 (596)
Q Consensus 516 ~~l-g~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~ 577 (596)
..+ |+.++....+.+.+. .++...|.++.+.++++.+++....+..
T Consensus 391 ~Yl~Ga~~a~~~~g~i~d~----------------~gW~g~Fi~~~~~a~l~~lll~~~~~~~ 437 (448)
T COG2271 391 AYLIGAALAGLPLGYIADT----------------WGWDGGFIVLSIAALLAILLLLPVWNAE 437 (448)
T ss_pred HHHhhHHhcCCcceeeEec----------------CCCcchHHHHHHHHHHHHHHHHHHHhhc
Confidence 998 777777666655432 2335678777777777777776665543
No 44
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=1.3e-22 Score=221.44 Aligned_cols=175 Identities=13% Similarity=0.064 Sum_probs=134.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIF 118 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~ 118 (596)
+.+.++......++.....+.+.+.++ ++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLP-IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 445555555556666666666655544 56789999999999999999999999999999999997 9999999998888
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.++.++++++ + +...++++|++.|++.+... ....++++++|+++ |++++
T Consensus 112 ~~~~~~~~~~---~--------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------rg~a~ 161 (476)
T PLN00028 112 APAVFCMSLV---S--------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------VGTAN 161 (476)
T ss_pred HHHHHHHHHh---c--------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------eeHHH
Confidence 8888877776 2 26778889999999887654 45567899999998 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhc----c-----cccchHHHHHHHHHHHHHHHHHHh
Q 007612 199 SYFYLALNLGSLFSNTILGYFE----D-----EGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~----~-----~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
++.+...++|+.+++.+.+.+. + ..|||+.|++.+++.++..+..++
T Consensus 162 g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 162 GIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9988777888877766655432 1 258999999877666555444443
No 45
>PRK03699 putative transporter; Provisional
Probab=99.91 E-value=7.3e-22 Score=210.36 Aligned_cols=173 Identities=10% Similarity=0.109 Sum_probs=145.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
+++|..+..++..+......+.+...++. +.+++|+|..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 55677777777777777766666666655 5678999999999999999999999999999999997 999999999988
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
..++.+++.++ ++...+++.|++.|++.|...+...+++.|.+|+++ |++.
T Consensus 82 ~~i~~~l~~~~-----------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~ 132 (394)
T PRK03699 82 MILAVAGLMFS-----------------------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSR 132 (394)
T ss_pred HHHHHHHHHHc-----------------------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHH
Confidence 88888888776 237788999999999999888999999999998888 9999
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcc-cccchHHHHHHHHHHHHHHH
Q 007612 198 FSYFYLALNLGSLFSNTILGYFED-EGMWALGFWVSTGSAFAALV 241 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~-~~~~~~~f~~~~~~~~~~~~ 241 (596)
.+..+...++|+.++|.+.+++.. ..+||+.|.+.++..++..+
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~ 177 (394)
T PRK03699 133 LLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFI 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 998888889999999998887754 57999999887665544433
No 46
>TIGR00898 2A0119 cation transport protein.
Probab=99.91 E-value=1e-22 Score=224.01 Aligned_cols=145 Identities=17% Similarity=0.183 Sum_probs=126.2
Q ss_pred HHHhhCCC---hHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCC
Q 007612 68 LTRVLQQN---NAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELT 144 (596)
Q Consensus 68 l~~~lg~~---~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (596)
+.++++++ ..+.++..+.+.++..++.++.|+++||+ |||++++++.++..++.++.+++ +
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~---~------------ 178 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFS---P------------ 178 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHc---c------------
Confidence 45678888 88999999999999999999999999997 99999999999998888888877 3
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccccc
Q 007612 145 PCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGM 224 (596)
Q Consensus 145 ~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~ 224 (596)
+++.++++|++.|++.+...+...+++.|++|+++ |+.+.++...+..+|.+++|.++..+.+
T Consensus 179 --------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~--- 241 (505)
T TIGR00898 179 --------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD--- 241 (505)
T ss_pred --------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH---
Confidence 38889999999999999999999999999999998 9999999999999999999988766543
Q ss_pred chHHHHHHHHHHHHHHHHHHh
Q 007612 225 WALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 225 ~~~~f~~~~~~~~~~~~~~~~ 245 (596)
||+.|++.++..++..+..++
T Consensus 242 wr~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 242 WRWLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999998877665555544433
No 47
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.91 E-value=9.3e-22 Score=208.67 Aligned_cols=172 Identities=16% Similarity=0.119 Sum_probs=149.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
++.++...+..++.....+...+.+|. +.+++|.+..+.++..+.+.++..+++++.|+++||+ |||+++.++.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 79 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCV 79 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHH
Confidence 356677788888888887777777765 5678999999999999999999999999999999997 99999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
++.++++++ ++.+.+++.|++.|++.+...+...+++.+++|+++ |+++++
T Consensus 80 ~~~~l~~~~-----------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 130 (382)
T PRK10091 80 IGNAMFTLS-----------------------SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVA 130 (382)
T ss_pred HHHHHHHHh-----------------------CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHH
Confidence 999888877 238889999999999999888888889999999888 889999
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHH
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVL 242 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~ 242 (596)
++..+..+|..++|.+++++.+..+||++|++.++..++..+.
T Consensus 131 ~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 131 GMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988899999999877655544443
No 48
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=6.7e-23 Score=213.55 Aligned_cols=171 Identities=22% Similarity=0.341 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 007612 47 LLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLS 126 (596)
Q Consensus 47 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~ 126 (596)
++..+..........+.++.++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++.+++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 3455556666666666676688889999999999999999999999999999999997 999999999999888855555
Q ss_pred hhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHh
Q 007612 127 LSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALN 206 (596)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 206 (596)
++ ++ .+.++++|++.|++.+...+...+++.|++|+++ |++.+++.+...+
T Consensus 81 ~~---~~--------------------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~ 131 (352)
T PF07690_consen 81 FA---SN--------------------FWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFS 131 (352)
T ss_dssp HH---CC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHH
T ss_pred hh---hh--------------------HHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhh
Confidence 54 22 5589999999999999999999999999999988 9999999999999
Q ss_pred HHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcC
Q 007612 207 LGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 207 lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
+|..++|.+++++.+..+|++.|++.++..++..++.....
T Consensus 132 ~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~ 172 (352)
T PF07690_consen 132 LGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFL 172 (352)
T ss_dssp HHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhh
Confidence 99999999999999889999999998887776665433333
No 49
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.91 E-value=2.8e-22 Score=218.31 Aligned_cols=379 Identities=13% Similarity=0.097 Sum_probs=226.6
Q ss_pred hhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCC
Q 007612 71 VLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHS 150 (596)
Q Consensus 71 ~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (596)
+++++..+.+++.+.+.++..++++++|+++||+ |||+++.++.++..++.+++.++..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6789999999999999999999999999999997 9999999999888888777655411
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc-ccchHHH
Q 007612 151 SLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE-GMWALGF 229 (596)
Q Consensus 151 ~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~-~~~~~~f 229 (596)
.+...+++.|+++|++.+...|....++.+++|+++ |+++.++.+.+.++|..++|.+++++.+. .+|+++|
T Consensus 129 -~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f 201 (465)
T TIGR00894 129 -GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIF 201 (465)
T ss_pred -cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeh
Confidence 125678899999999999999999999999999999 99999999999999999999999999888 4999999
Q ss_pred HHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCccccccccch
Q 007612 230 WVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKF 309 (596)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (596)
++.++..++..++.+...++.+++++..++.+. +.
T Consensus 202 ~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~------------------------------------------- 236 (465)
T TIGR00894 202 YVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK--KY------------------------------------------- 236 (465)
T ss_pred hhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH--HH-------------------------------------------
Confidence 988766555544444333322211111110000 00
Q ss_pred hhhhhhhccccccccccCCCCCCcccCccchhhhhhhh-hhHHHHHHhHhHhhhhccccceeEeeeccccccccccccCC
Q 007612 310 LDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCIL-RLLPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSNFRIPP 388 (596)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (596)
.+. ..+.+..+...+.+|+ .+...+.++ ..+..++....++....+++.++.+ ..+.+.. ..
T Consensus 237 i~~-----~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-~~g~s~~------~~ 299 (465)
T TIGR00894 237 INS-----SLQGQKGSTRQSLPIK-----AIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISW-VLRVSGK------EN 299 (465)
T ss_pred HHh-----hcccccCCCCCCCCHH-----HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcChH------Hh
Confidence 000 0000000000011221 111112222 1222222233333333333333221 1122211 22
Q ss_pred ccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCce
Q 007612 389 ASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASS 468 (596)
Q Consensus 389 ~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (596)
+....+..++..+...+.+++.+++.+|.. ......+++..+......+...+.... ..
T Consensus 300 g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~ 358 (465)
T TIGR00894 300 GLLSSLPYLFAWLCSIFAGYLADFLKSSKT----LSLTAARKIFNGIGGLGPGIFAYALPY-----------------LS 358 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CcHHHHHHHHHHHHHHHHHHHHHHHHH-----------------cC
Confidence 334444455666667777777666543321 000011222222222111211111110 01
Q ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCC
Q 007612 469 LSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLN 548 (596)
Q Consensus 469 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~ 548 (596)
.+....+..+.+.+.+.+...+..+....+..|+ .+|.++|+.++.+.+|+.++|.+.+.+.+.. .
T Consensus 359 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~-------------~ 424 (465)
T TIGR00894 359 AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQD-------------S 424 (465)
T ss_pred CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCC-------------C
Confidence 1233333444444555555555565666677775 8999999999999999999998888554310 1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhhc
Q 007612 549 KGHLDRFYFLLAGLTTVDFVVYIACA 574 (596)
Q Consensus 549 ~~~~~~~f~~~a~i~~i~~~~~~~~~ 574 (596)
.+.+...|++.+++.+++.+++.+..
T Consensus 425 ~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 425 KNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred chHHHHHHHHHHHHHHHHHHHeeeee
Confidence 23467788888888888877666543
No 50
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.91 E-value=5.8e-22 Score=205.75 Aligned_cols=347 Identities=20% Similarity=0.263 Sum_probs=253.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 007612 44 IIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLV 123 (596)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~ 123 (596)
+.+.+..+......+...+.++.|. +++|.++.+.+++.+...++..++.++.|+++||+ |||+.+.++.++..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 3456667777777777878887776 46799999999999999999999999999999997 999999999999999988
Q ss_pred HHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHH
Q 007612 124 LLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYL 203 (596)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 203 (596)
++.+. ++...++++|++.|++.+...+...+++.|.+|+++ |++.+++.+.
T Consensus 80 ~~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 130 (352)
T cd06174 80 LLAFA-----------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSA 130 (352)
T ss_pred HHHHh-----------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHH
Confidence 88776 237889999999999999999999999999999988 9999999999
Q ss_pred HHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcc
Q 007612 204 ALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGE 283 (596)
Q Consensus 204 ~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 283 (596)
..++|..++|.+++.+.+..+|++.|++..+..++..+......+
T Consensus 131 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 175 (352)
T cd06174 131 GFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLR----------------------------------- 175 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------
Confidence 999999999999999998889999999887666555544332210
Q ss_pred cchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhh
Q 007612 284 DLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVF 363 (596)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (596)
+.....+..+..........
T Consensus 176 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~~ 195 (352)
T cd06174 176 ------------------------------------------------------------LLLLLALAFFLLSFGYYGLL 195 (352)
T ss_pred ------------------------------------------------------------HHHHHHHHHHHHHhHHHHHH
Confidence 00000000111111111111
Q ss_pred ccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHH-HHHHHHHHHHHHH
Q 007612 364 TQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQ-RMGIGLVIAIVAM 442 (596)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~-~i~ig~~l~~v~~ 442 (596)
...+. +..+..+.+ ....+.+.....++..+..++.+++. +|.+ +++ .+.++..+..++.
T Consensus 196 ~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~--------~~~~~~~~~~~~~~i~~ 256 (352)
T cd06174 196 TYLPL-YLQEVLGLS------AAEAGLLLSLFGLGGILGALLGGLLS----DRLG--------RRRLLLLIGLLLAALGL 256 (352)
T ss_pred HHHHH-HHHHhcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH--------hhhHHHHHHHHHHHHHH
Confidence 11111 111000111 11123334444555566666666544 3433 223 5777877777777
Q ss_pred HHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Q 007612 443 LAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYV 522 (596)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l 522 (596)
+..... .+.+...+..++.+++.+...+...++..|..|++.|++.+|+.++...+|..+
T Consensus 257 ~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 316 (352)
T cd06174 257 LLLALA--------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGAL 316 (352)
T ss_pred HHHHHh--------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 766653 135667778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 007612 523 SSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYI 571 (596)
Q Consensus 523 g~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~ 571 (596)
++.+.+.+.+ ..+++..|++.+++.+++.+..+
T Consensus 317 ~~~i~g~l~~----------------~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 317 GPLLAGLLLD----------------TGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHhc----------------ccCcchHHHHHHHHHHHHHHHhe
Confidence 9999997764 12345577877888777766554
No 51
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=4.5e-22 Score=219.21 Aligned_cols=405 Identities=14% Similarity=0.105 Sum_probs=246.1
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHH
Q 007612 78 EAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLF 157 (596)
Q Consensus 78 ~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 157 (596)
+.+++.+...++..+++++.|+++|++ |||++++++.+++.++.++++++ .+...+
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a-----------------------~~~~~l 145 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA-----------------------PSWYQL 145 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh-----------------------hhHHHH
Confidence 458999999999999999999999997 99999999999999999999998 348899
Q ss_pred HHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc--ccchHHHHHHHHH
Q 007612 158 YLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE--GMWALGFWVSTGS 235 (596)
Q Consensus 158 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~--~~~~~~f~~~~~~ 235 (596)
+++|++.|+|.|+.....+.+++|..|++. |+...+.++...++|..++. +.++..++ .+||..+.+..+.
T Consensus 146 ~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~-~~~~~~~~~~~~Wr~~~~~~~i~ 218 (513)
T KOG0254|consen 146 IVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGY-CINYGTSKVYAGWRIPLGLALIP 218 (513)
T ss_pred HHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHH-HHhhhhccCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999 99999999999999999995 45555443 4899888877766
Q ss_pred HHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCcccccc--c-cchhhh
Q 007612 236 AFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTH--G-FKFLDR 312 (596)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~--~-~~~~~~ 312 (596)
.++..+.+++ +||+|+|+.+.++.+++.+.+.++.... + ....+.
T Consensus 219 ~~~~~~~~~~--------------------------------~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~ 266 (513)
T KOG0254|consen 219 AVILALGMLF--------------------------------LPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELEL 266 (513)
T ss_pred HHHHHHHHHh--------------------------------CCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHH
Confidence 5555554333 6677777777666666655555544411 1 000100
Q ss_pred hhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhccccceeEeeeccccccccccccCCcccc
Q 007612 313 AAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMS 392 (596)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (596)
-......+ ......+..|+.+.. ...+|+....+.+..++.. ..+...........+.. +.........
T Consensus 267 ~~~~~~~~--~~~~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~-----tG~~~~~~Y~~~if~~~--g~~~~~~~~~ 335 (513)
T KOG0254|consen 267 LKIKLLVE--AEVAEGKASWGELFS--PKVRKRLIIGLLLQLFQQL-----TGINYVFYYSTTIFKSA--GLKSDTFLAS 335 (513)
T ss_pred HHHHHHHh--hhcccccccHHHhcC--cchHHHHHHHHHHHHHHHH-----hCCceEEeehHHHHHhc--CCCCchHHHH
Confidence 00000000 000011111221111 0122222222222222221 11111111100111111 1111111112
Q ss_pred ccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehh
Q 007612 393 SFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIF 472 (596)
Q Consensus 393 ~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (596)
.+..+..++...+...+++|+ + ++..++.|...+.+++++++.......+... ......+.
T Consensus 336 ~~~~~v~~~~t~~~~~lvd~~----g--------Rr~lll~s~~~m~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 396 (513)
T KOG0254|consen 336 IILGVVNFLGTLVATYLVDRF----G--------RRKLLLFGAAGMSICLVILAVVGVFALYYPN-------SSKGAGWL 396 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHh----c--------cHHHHHHhHHHHHHHHHHHHHHHHHhccCCC-------cccchhHH
Confidence 222222333333333444444 3 3345888888888888877764322100000 00011222
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchh
Q 007612 473 WQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHL 552 (596)
Q Consensus 473 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 552 (596)
.+...++..........+..+.+..|.+|.+.|+.+.++....+++.+++-............ .
T Consensus 397 ~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~----------------~ 460 (513)
T KOG0254|consen 397 AIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG----------------I 460 (513)
T ss_pred HHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------c
Confidence 233333444444444557777899999999999999999999999888776555554433110 1
Q ss_pred hHHHHHHHHHHHHHHH-HHHhhcccccccchhhhhhhccc
Q 007612 553 DRFYFLLAGLTTVDFV-VYIACAKWYKCIELEAKCAESNQ 591 (596)
Q Consensus 553 ~~~f~~~a~i~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~ 591 (596)
...|+.+++++.+..+ +.+++.+|+|+++.|+.++....
T Consensus 461 ~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 461 GGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred cchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 2356777777777777 78889999999999987654443
No 52
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=9.8e-22 Score=215.66 Aligned_cols=167 Identities=14% Similarity=0.190 Sum_probs=144.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
.+++.+..+.+..+...+..+.+...+ +++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVL-TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 445666667777777666666555444 466789999999999999999999999999999999997 999999999999
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
.+++.+++.++ .+.+.++++|++.|++.++..+...+++.|.+|+++ |+++
T Consensus 95 ~~~~~~~~~~~-----------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~ 145 (496)
T PRK03893 95 FSVGTLACGFA-----------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKA 145 (496)
T ss_pred HHHHHHHHHHH-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 99988888876 237789999999999999999999999999999998 9999
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHH
Q 007612 198 FSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGS 235 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~ 235 (596)
+++.+.+.++|..++|.+.+++.+..+|++.|++..+.
T Consensus 146 ~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 146 SGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999875443
No 53
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.90 E-value=2.7e-21 Score=205.05 Aligned_cols=156 Identities=13% Similarity=0.107 Sum_probs=137.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
.|.++.+++..++.......+.+.+|.|+. ++|.|..+.+++.+.+.++..+++++.|+++||+ |||+++.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 356788888888888888888888888875 6899999999999999999999999999999997 99999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
++...++++ ++.+.++++|++.|++.+...|...+.+.+..++++ |++.++
T Consensus 83 ~~~~~~~~~-----------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 133 (381)
T PRK03633 83 AGCAGLGLM-----------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLA 133 (381)
T ss_pred HHHHHHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHH
Confidence 888887776 237889999999999999988888888888888887 999999
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccch
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWA 226 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~ 226 (596)
+++.+.++|..+||.+++.+.+...+.
T Consensus 134 ~~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 134 AYMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccch
Confidence 999999999999999999887754333
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=9.6e-21 Score=202.33 Aligned_cols=170 Identities=12% Similarity=0.066 Sum_probs=140.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
..+|.+....+..+......+...++++.++ +++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++..+..+
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~ 87 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLL 87 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHH
Confidence 4567778888888888888887888888888 56899999999999999999999999999999997 999999999988
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
..++.+++.+... . ..+...+++.|++.|+|.+...+...+.+.+.+|+++ |+++
T Consensus 88 ~~~~~~~~~~~~~-~------------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g~~ 142 (402)
T TIGR00897 88 WCVGHAAFIVFGL-G------------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LSSA 142 (402)
T ss_pred HHHHHHHHHHHhc-c------------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HHHH
Confidence 8887665432100 0 0236677889999999988877778888899999988 9999
Q ss_pred HHHHHHHHhHHH-HHHhhhhhhhcccccchHHHHHHHH
Q 007612 198 FSYFYLALNLGS-LFSNTILGYFEDEGMWALGFWVSTG 234 (596)
Q Consensus 198 ~~~~~~~~~lg~-~~~~~i~g~l~~~~~~~~~f~~~~~ 234 (596)
.|+.+.+.++|. .++|.+++++.+..||+..++....
T Consensus 143 ~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 143 VGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 999999999996 6899999998888887666655443
No 55
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=4.3e-21 Score=202.91 Aligned_cols=176 Identities=16% Similarity=0.074 Sum_probs=148.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIF 118 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~ 118 (596)
+++.++.+.+..+..........+.+| ++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 345555566666666666665656555 45678999999999999999999999999999999997 9999999999988
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.++.+++.++ ++.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+
T Consensus 81 ~~~~~~~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 131 (385)
T TIGR00710 81 ALSSLGLALS-----------------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIY 131 (385)
T ss_pred HHHHHHHHHH-----------------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHH
Confidence 8888888776 237778999999999999999999999999999888 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
++.+...++|..++|.+++++.+..+|++.|++.++..++..+..+.
T Consensus 132 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 132 SILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988899999998877665555444443
No 56
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.90 E-value=6.7e-21 Score=202.92 Aligned_cols=175 Identities=13% Similarity=0.089 Sum_probs=125.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH-HHHHHhhhHHHHhhhccCchHHHH-HHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTG-TVYIFSLVGAFLSDSYWGRFKTCA-IFQGI 117 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Gr~~~l~-~~~~~ 117 (596)
....+..++..++.+.....+.+.++.|+++++|.|+.+.+++.+...+ +..++.+++|+ +||+ ||||.++ .+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~ 91 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLL 91 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHH
Confidence 3455677777888888888889999999999999999999999877655 44455555555 9997 9988754 44555
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccch--h
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSK--V 195 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r--~ 195 (596)
.+++..+..++ .+.+.+++.+.+.+...+...|....+..++.+++. | +
T Consensus 92 ~~~~~~~~~~~-----------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 142 (393)
T PRK15011 92 GVLACTLFAWN-----------------------RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG------REAV 142 (393)
T ss_pred HHHHHHHHHHh-----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc------chHH
Confidence 45555555555 225555444444333334566777788787766554 4 3
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
...++.+.+.++|.++||.+++++.++.|||..|++.++..++..+..+.
T Consensus 143 ~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 143 MFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 44578888999999999999999998899999998877655554444333
No 57
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=2.1e-21 Score=205.64 Aligned_cols=174 Identities=16% Similarity=0.187 Sum_probs=142.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
++.+...++..+......+.... ..+++.+++|.+..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGF-AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHH
Confidence 44445555555555555544444 44566678999999999999999999999999999999997 99999999998888
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
++.+++.+. + +...+++.+++.|++.+...+...+++.|.+|+++ |+++++
T Consensus 94 ~~~~~~~~~---~--------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~ 144 (398)
T TIGR00895 94 VFTLLCALA---T--------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAVG 144 (398)
T ss_pred HHHHHHHHc---c--------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhHh
Confidence 888777766 2 36778899999999999999999999999999988 999999
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHH
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~ 244 (596)
+.+...++|..++|.+++++.+..+|++.|++.++..++..++.+
T Consensus 145 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 145 LMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred hHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHH
Confidence 999999999999999999999989999999887544444433333
No 58
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.89 E-value=6.5e-21 Score=202.96 Aligned_cols=163 Identities=15% Similarity=0.095 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
.++.+++.+++..+........++.. .+++|.++.+.+++.+.+.+...++.+++|+++||+ ||||+++++.++..++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~ 81 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLG 81 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHH
Confidence 45566666777666544444444443 578899999999999999999999999999999997 9999999999998888
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.+++.+. + + .++.|+++|++.+...|+..+++.|++|+++ |+++.++.
T Consensus 82 ~~~~~~~---~--------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~ 129 (393)
T PRK11195 82 CLLMLFG---I--------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWM 129 (393)
T ss_pred HHHHHHH---H--------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence 7776655 1 1 2678999999999999999999999999998 99999999
Q ss_pred HHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHH
Q 007612 202 YLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAA 239 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~ 239 (596)
+...++|.++||.++|++.+. .|+..+.+.....+++
T Consensus 130 ~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 130 EGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999875 4776666555444333
No 59
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=2.2e-20 Score=200.14 Aligned_cols=147 Identities=12% Similarity=0.070 Sum_probs=129.7
Q ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCC
Q 007612 68 LTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCG 147 (596)
Q Consensus 68 l~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (596)
+.+++|.+..+.++..+++.++..+++++.|+++||+ |||++++.+..+..++.+++.++
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a------------------- 101 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFT------------------- 101 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHc-------------------
Confidence 5678999999999999999999999999999999997 99999999999999998888877
Q ss_pred CCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchH
Q 007612 148 THSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWAL 227 (596)
Q Consensus 148 ~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~ 227 (596)
++...++++|+++|++.+...+...+++.|.+|+++ |++.+++.+...++|..+||.+++.+.++.+|++
T Consensus 102 ----~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~ 171 (413)
T PRK15403 102 ----TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKV 171 (413)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 237889999999999988766777788899999888 8999999999999999999999999988889999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 007612 228 GFWVSTGSAFAALVLFL 244 (596)
Q Consensus 228 ~f~~~~~~~~~~~~~~~ 244 (596)
.|++.++..++..+..+
T Consensus 172 ~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 172 LFAIIAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988776555554433
No 60
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=3e-21 Score=207.43 Aligned_cols=394 Identities=13% Similarity=0.054 Sum_probs=223.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.+|...+..++...+++.+.++++.|+++++|++..+.+.+.+.+.++..+++++.|+++||+ ||||+++++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4667777777888888888899999999999999999999999999999999999999999997 999999887665554
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+...+......+.. ......+..+.++..+...+.....+.++.++..+ .++..++.
T Consensus 89 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~g~ 145 (420)
T PRK09528 89 LFGPFFIYVFAPLL-------------------QYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSR----RSGFEYGR 145 (420)
T ss_pred HHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHh----hccccchh
Confidence 43322211000000 00011122222333333223322333333321110 15667788
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCC
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSA 280 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 280 (596)
.+...++|..++|.++|++.+ .+|+++|++.++..++.++..+...++.++++...++ +
T Consensus 146 ~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~- 204 (420)
T PRK09528 146 ARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA-------------------L- 204 (420)
T ss_pred hHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccc-------------------h-
Confidence 888889999999999998876 5899999887766555554444333221110000000 0
Q ss_pred CcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhh-hHHHHHHhHhH
Q 007612 281 EGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILR-LLPIWLCTILY 359 (596)
Q Consensus 281 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 359 (596)
.+ .+ +.....+.. ...++ +..+. .+........+
T Consensus 205 --------------~~-~~-----~~~~~~~~~------------------------~~l~~-~~~~~l~l~~~~~~~~~ 239 (420)
T PRK09528 205 --------------GA-NA-----SAVSLKDAL------------------------ALLKL-PKFWFLVLYVIGVACFY 239 (420)
T ss_pred --------------hc-cc-----ccccHHHHH------------------------HHccC-CCeEeehHHHHHHHHHH
Confidence 00 00 000000000 00001 11111 11111111222
Q ss_pred hhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHH
Q 007612 360 SVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAI 439 (596)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~ 439 (596)
.....+.+.++..... +.... ....+.+..+..+...+..++.+++ .+|.+ +++.+..+.++.+
T Consensus 240 ~~~~~~~~~~~~~~~~--~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l----~dr~g--------~~~~~~~~~~l~~ 303 (420)
T PRK09528 240 DVFDQQFPNFFASFFA--TPEQG--TRVFGYLNSFQVFLEALIMFFAPFI----INRIG--------AKNALLLAGTIMA 303 (420)
T ss_pred HHHHHHHHHHHHHHHh--ccCcc--hHHHHHHHHHHHHHHHHHHHHHHHH----HHHhC--------cchhhHHHHHHHH
Confidence 2222222222111100 00000 0011222333334444555555544 44444 2233666677777
Q ss_pred HHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHH-HHHHHHH
Q 007612 440 VAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSAL-CMTSISL 518 (596)
Q Consensus 440 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl-~~~~~~l 518 (596)
+++...++. .+.++++...++.+++.+...+...+++.+.+|++.+++..++ +++...+
T Consensus 304 ~~~~l~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l 363 (420)
T PRK09528 304 VRIIGSGFA--------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQL 363 (420)
T ss_pred HHHHHHHhc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHH
Confidence 776666542 2445566667778888877777888899999999999988766 6778889
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhccc
Q 007612 519 GNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKW 576 (596)
Q Consensus 519 g~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~ 576 (596)
|+.+++.+.+.+.+.. +++..|+..+++.++..++.++..++
T Consensus 364 g~~ig~~~~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 364 GAVFLSTLAGNLYDSI----------------GFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHHHhh----------------CchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999887622 35668888888877776666555443
No 61
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.89 E-value=1.2e-21 Score=211.64 Aligned_cols=180 Identities=10% Similarity=0.025 Sum_probs=136.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.++..++............... .+++++ .|+++.+.+++.+.+.++..++.++.|+++||+ |||+.++++.++..+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALA-MPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhh-hHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHH
Confidence 33444444444443333333333 446665 599999999999999999999999999999997 999999999888888
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+.+++.+. ++. ..+...+++.|++.|++.|...+.....+.|++|+++ |++++++
T Consensus 104 ~~~~~~~~---~~~----------------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~ 158 (438)
T TIGR00712 104 VMLLMGFV---PWA----------------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSI 158 (438)
T ss_pred HHHHHhcc---ccc----------------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHH
Confidence 87776654 110 1235667788999999999988989999999999999 9999999
Q ss_pred HHHHHhHHHHHHhhhhhhhc-ccccchHHHHHHHHHHHHHHHHHHhcCc
Q 007612 201 FYLALNLGSLFSNTILGYFE-DEGMWALGFWVSTGSAFAALVLFLAGTT 248 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 248 (596)
++...++|+.++|.+.+... +..+|++.|++.++..++..+..++..+
T Consensus 159 ~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 159 WNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999988777544 4578999999877665554444333333
No 62
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.89 E-value=1.5e-20 Score=200.22 Aligned_cols=172 Identities=15% Similarity=0.102 Sum_probs=143.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
+.+|.+++.....++.........+.+|. +.+++|.|+.+.+++.+.+.++..++.++.|+++||+ |||++++++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIAD-MARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 34566666666666666666655555554 4578999999999999999999999999999999997 999999999988
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
..++.+++.++ + +...+++.|++.|++.+...+....+..|.+++++ |+++
T Consensus 83 ~~~~~~~~~~~---~--------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 133 (394)
T PRK11652 83 FILGTLVALFA---H--------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHA 133 (394)
T ss_pred HHHHHHHHHHH---c--------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHH
Confidence 88888877766 2 37788999999999988888888888889888877 8899
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHH
Q 007612 198 FSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAAL 240 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~ 240 (596)
.++.+.+..+|..++|.+++++.+..+|++.|++.++..++..
T Consensus 134 ~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 134 NSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888899999998765544433
No 63
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.88 E-value=3.9e-21 Score=206.17 Aligned_cols=377 Identities=12% Similarity=0.150 Sum_probs=250.0
Q ss_pred hhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCC
Q 007612 71 VLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHS 150 (596)
Q Consensus 71 ~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (596)
++.++..+.+++.+.+..+..++++++|+++||+ |-|+++..+.++.+++.++..++..
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-------------------- 125 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-------------------- 125 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 5778899999999999999999999999999997 9999999999999999999998844
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc-ccchHHH
Q 007612 151 SLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE-GMWALGF 229 (596)
Q Consensus 151 ~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~-~~~~~~f 229 (596)
.+...+++.|+++|++.|...|+...+.+++.|+++ |++..++...+..+|.+++-+++|++.+. .||+++|
T Consensus 126 -~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sif 198 (466)
T KOG2532|consen 126 -IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIF 198 (466)
T ss_pred -hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHH
Confidence 224578999999999999999999999999999999 99999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCccccccccch
Q 007612 230 WVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKF 309 (596)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (596)
++.++..++..++.+......+.+++.-+..
T Consensus 199 Y~~g~~g~i~~~~w~~~~~d~P~~h~~is~~------------------------------------------------- 229 (466)
T KOG2532|consen 199 YVFGIVGLIWFILWFLFYSDSPSKHPNISEK------------------------------------------------- 229 (466)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCCHH-------------------------------------------------
Confidence 9988776666655554433322222211110
Q ss_pred hhhhhhhccccccccccCCCCCCcccCccchhhhhhhh-hhHHHHHHhHhHhhhhccccceeEeeeccccccccccccCC
Q 007612 310 LDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCIL-RLLPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSNFRIPP 388 (596)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (596)
|+..+...+..++.++..+.||+.. -..+.++ ..+..++....+.....+.|++ ..+..+++.. ..
T Consensus 230 -El~~I~~~k~~~~~~~~~~vP~~~i-----~ts~~vwai~~~~f~~~~~~~~l~~y~PtY-~~~VL~f~v~------~~ 296 (466)
T KOG2532|consen 230 -ELKYIEKGKSEAHVKKKPPVPYKAI-----LTSPPVWAIWISAFGGNWGFYLLLTYLPTY-LKEVLGFDVR------ET 296 (466)
T ss_pred -HHHHHHhcccccccCCCCCCCHHHH-----HcCHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHhCCChh------hh
Confidence 1111111111001111145677521 1112222 2222233344444444444443 3333344433 35
Q ss_pred ccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHH--HHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCC
Q 007612 389 ASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRM--GIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGA 466 (596)
Q Consensus 389 ~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i--~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (596)
+..+++..+...+...+.+.+.|++..| . -+.+..+++ .++....++.++.+++...+
T Consensus 297 G~~salP~l~~~~~k~~~g~lsD~l~~~-~----ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~--------------- 356 (466)
T KOG2532|consen 297 GFLSALPFLAMAIVKFVAGQLSDRLTFR-I----LSETTVRKIFNTIAFGGPAVFLLVLAFTSDE--------------- 356 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc-c----CchHhHHHHHHhHHHHHHHHHHHeeeecCCC---------------
Confidence 6666666777777777777777776555 2 122233343 56666667777666664311
Q ss_pred ceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCC
Q 007612 467 SSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGN 546 (596)
Q Consensus 467 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~ 546 (596)
+.+ ..+.+...+.+.................++..+..+|+.++...+.++++|.+.+.+... +
T Consensus 357 ---~~~-~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~------------~ 420 (466)
T KOG2532|consen 357 ---HRL-LAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTD------------N 420 (466)
T ss_pred ---cch-HHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC------------C
Confidence 222 222222222222222322222222331347799999999999999999999999866430 1
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHhhc
Q 007612 547 LNKGHLDRFYFLLAGLTTVDFVVYIACA 574 (596)
Q Consensus 547 ~~~~~~~~~f~~~a~i~~i~~~~~~~~~ 574 (596)
+...++.+|++.+++.+++.+++.++.
T Consensus 421 -t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 421 -TREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred -CHHHHHHHHHHHHHHHHHhchheeEee
Confidence 245568899999999999998887765
No 64
>PRK15075 citrate-proton symporter; Provisional
Probab=99.88 E-value=1.8e-20 Score=202.21 Aligned_cols=171 Identities=15% Similarity=0.099 Sum_probs=124.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHH-HHHH-----HHHHHHhhhHHHHhhhccCchHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNV-SKWT-----GTVYIFSLVGAFLSDSYWGRFKTCAIF 114 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~-~~~~-----~~~~i~~~~~G~laDr~~Gr~~~l~~~ 114 (596)
+.....++..+.+.+....+... .+.+.++++.++.+.+... +... +...+++++.|+++||+ ||||.++.+
T Consensus 15 ~~~~~~~~~~~~~~~d~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~ 92 (434)
T PRK15075 15 RAILRVTSGNFLEMFDFFLFGFY-ATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIVT 92 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHHH
Confidence 34555556666666665555444 4467788898777654433 2222 22246788999999997 999999999
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccch
Q 007612 115 QGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSK 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 194 (596)
.+++.++.++++++.+...+. ......++++|+++|++.|...+....+++|++|+++ |
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~---------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------r 151 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIG---------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------K 151 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHH---------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------c
Confidence 999999999998872211000 0001246899999999999999999999999999999 9
Q ss_pred hhHHHHHHHHHhHHHHHHhhhhhhh--------cccccchHHHHHHHH
Q 007612 195 VAFFSYFYLALNLGSLFSNTILGYF--------EDEGMWALGFWVSTG 234 (596)
Q Consensus 195 ~~~~~~~~~~~~lg~~~~~~i~g~l--------~~~~~~~~~f~~~~~ 234 (596)
++..++.....++|..+++.+++.+ .+..|||++|++..+
T Consensus 152 g~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 152 GFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 9999998888888887777766654 246799999987543
No 65
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=4.1e-20 Score=197.24 Aligned_cols=167 Identities=16% Similarity=0.179 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 007612 49 NQGLATLAFFGVGVNLVLF--LTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLS 126 (596)
Q Consensus 49 ~~~~~~~~~~~~~~~l~~y--l~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~ 126 (596)
..+..+..+++...++|.+ +.+++|.++.+.++..+.+.++..++.++.|+++||+ |||+++.++.++..++.+++.
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~ 89 (401)
T PRK11043 11 LAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGML 89 (401)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHH
Confidence 3333444444444555543 6789999999999999999999999999999999997 999999999988888888777
Q ss_pred hhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHh
Q 007612 127 LSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALN 206 (596)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 206 (596)
++ + +.+.+++.|+++|++.+...+...+++.|.+|+++ +.+.++..+...+
T Consensus 90 ~~---~--------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 140 (401)
T PRK11043 90 WV---E--------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVA 140 (401)
T ss_pred Hh---c--------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHH
Confidence 76 2 37778899999999988877888889999999887 8888888888889
Q ss_pred HHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 207 LGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 207 lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
+|..++|.+++++.+..+|++.|++..+..++..++.+.
T Consensus 141 ~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 141 LSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999899999998877665555444433
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.88 E-value=8.5e-20 Score=193.66 Aligned_cols=363 Identities=10% Similarity=-0.010 Sum_probs=225.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH-HHHHHH
Q 007612 45 IILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI-FVIGLV 123 (596)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~-~~~~~~ 123 (596)
.+.+..+....++....+++|.|++ ++|+|..+.+++.+.+.+...+++++.|.++||+ ||++.......+ ..+..+
T Consensus 8 ~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~ 85 (382)
T TIGR00902 8 WLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAA 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHH
Confidence 3445555555666667788999985 6899999999999999999999999999999997 885443222111 111111
Q ss_pred -HHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHH
Q 007612 124 -LLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFY 202 (596)
Q Consensus 124 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (596)
....+ ++.+.+++.|.+++.+.+...|...++..+. +++ |++.++...
T Consensus 86 ~~~~~~-----------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~~g~~~ 134 (382)
T TIGR00902 86 AFSAGA-----------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLDYGKVR 134 (382)
T ss_pred HHHHhh-----------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCCccHHH
Confidence 12222 3477888899999988888888888886553 344 778899999
Q ss_pred HHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCc
Q 007612 203 LALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEG 282 (596)
Q Consensus 203 ~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 282 (596)
...++|.+++|.+++++.+.+||+..|++..+..++.++ .+...++.+ ++++. +
T Consensus 135 ~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~---~~~~~---------------------~- 188 (382)
T TIGR00902 135 LIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTIP---PKDAI---------------------P- 188 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCCC---CCccc---------------------c-
Confidence 999999999999999999999999998876544332222 222222110 00000 0
Q ss_pred ccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhH-HHHHHhHhHhh
Q 007612 283 EDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLL-PIWLCTILYSV 361 (596)
Q Consensus 283 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 361 (596)
++. .... ..+ .++.+.|+.+... ..++....+..
T Consensus 189 ------~~~------------~~~~----------------------~~~-----~~~l~~~~~~~~l~~~~l~~~~~~~ 223 (382)
T TIGR00902 189 ------EDE------------SQGD----------------------SAF-----IALLKNPMNLRFLAAVCLIQGAHAA 223 (382)
T ss_pred ------ccc------------cccc----------------------hhH-----HHHHcChHHHHHHHHHHHHHHHHHH
Confidence 000 0000 000 0011112222222 12222223333
Q ss_pred hhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHH
Q 007612 362 VFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVA 441 (596)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~ 441 (596)
.+...+. +.+. .+.+.. ..+....+..+..++...+ ..++.+|.+ .++.+.++.++..+.
T Consensus 224 ~~~~~~~-~l~~-~g~s~~------~~g~l~~~~~~~~i~~~~~----~~~l~~r~g--------~~~~l~~~~~~~~~~ 283 (382)
T TIGR00902 224 YYGFSAI-YWQA-AGISAS------ATGLLWGIGVLAEIIIFAF----SNKLFQNCS--------ARDLLLISAIACVGR 283 (382)
T ss_pred HHHHHHH-HHHH-CCCCHh------HHHHHHHHHHHHHHHHHHH----hHHHHhhCC--------HHHHHHHHHHHHHHH
Confidence 3322221 2211 111111 1111222222223333333 334455554 667788999999988
Q ss_pred HHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHH-HHHHHH
Q 007612 442 MLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMT-SISLGN 520 (596)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~-~~~lg~ 520 (596)
+..++.. .+.+.++....+.++..+...+....++.+. |++.+++++|++++ ...+|.
T Consensus 284 ~~~~~~~--------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~ 342 (382)
T TIGR00902 284 WAIIGAI--------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLI 342 (382)
T ss_pred HHHHHhH--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHH
Confidence 8877653 2556667778999999999999999999988 99999999999874 577999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHH
Q 007612 521 YVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVV 569 (596)
Q Consensus 521 ~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~ 569 (596)
.+++.+.|.+.+.. +. ..|+..+++++++.++
T Consensus 343 ~~g~~~~G~l~~~~----------------g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 343 AIFTAFAGFIYPTL----------------GA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHhc----------------cH-HHHHHHHHHHHHHHHH
Confidence 99999999887622 22 4577777777766444
No 67
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.88 E-value=8.5e-20 Score=194.75 Aligned_cols=179 Identities=11% Similarity=-0.005 Sum_probs=130.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTR-VLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
|.+++..+........-+ ..+.+...+.+ ++|+|..|.+++.+++.++..++.++.|++.||+ |.|+++.++.++.+
T Consensus 34 r~l~~s~~~f~~~F~~w~-~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWM-LFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 555554444333333333 33334445544 7999999999999999999999999999999997 99999999999988
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
+..++++++...+ ..++..+++.|++.|++ |...+.....+++++|+++ |+++++
T Consensus 112 i~~~~~~~a~~~~------------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~G 166 (462)
T PRK15034 112 IPCVWLGIAVQNP------------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALG 166 (462)
T ss_pred HHHHHHHHHHccc------------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHH
Confidence 8888887651101 12488899999999998 7788999999999999999 999999
Q ss_pred HHHHHHhHHHHHHhhhhhhhc-----c-------------cccchHHHHHHHHHHHHHHHHHHhc
Q 007612 200 YFYLALNLGSLFSNTILGYFE-----D-------------EGMWALGFWVSTGSAFAALVLFLAG 246 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~-----~-------------~~~~~~~f~~~~~~~~~~~~~~~~~ 246 (596)
+.....|+|..+++.++..+. . ..+|+.++++..+..++..++.++.
T Consensus 167 i~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 167 INGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 987667777766655444322 1 2346777766665555555444443
No 68
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=7.6e-21 Score=199.80 Aligned_cols=152 Identities=13% Similarity=0.067 Sum_probs=132.2
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCC
Q 007612 64 LVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNEL 143 (596)
Q Consensus 64 l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (596)
..+++.+++|++..+.+++.+...++..++.++.|+++||+ |||++++++.++..++.+++.++
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~--------------- 80 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFS--------------- 80 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHh---------------
Confidence 34577889999999999999999999999999999999997 99999999999999998888877
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHh-hhhhhhccc
Q 007612 144 TPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSN-TILGYFEDE 222 (596)
Q Consensus 144 ~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~-~i~g~l~~~ 222 (596)
.+.+.+++.|++.|++.+...+...+++.|++|+++ |++++++.+.+.++|..++| .+++.+.+.
T Consensus 81 --------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (379)
T TIGR00881 81 --------TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAEL 146 (379)
T ss_pred --------hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhc
Confidence 237889999999999999999999999999999988 99999999999999999999 566777777
Q ss_pred ccchHHHHHHHHHHHHHHHHHHh
Q 007612 223 GMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 223 ~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
.+|++.|++.+++.++..+..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 147 YSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred CCchhHHHHHHHHHHHHHHHHhe
Confidence 89999998877655544443333
No 69
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=1e-19 Score=193.65 Aligned_cols=167 Identities=16% Similarity=0.120 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 007612 47 LLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLS 126 (596)
Q Consensus 47 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~ 126 (596)
....+....++....+.+|. +.+++|.+..+.++..+.+.++..++.++.|+++||+ |||+.++++.++..++.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHH
Confidence 33344444444444455554 5678999999999999999999999999999999997 999999999988888888877
Q ss_pred hhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHh
Q 007612 127 LSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALN 206 (596)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 206 (596)
.+ + +...++++|+++|++.+...+...+++.|.+|+++ |+++.++.+...+
T Consensus 87 ~~---~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ 137 (392)
T PRK10473 87 LA---E--------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITC 137 (392)
T ss_pred Hh---C--------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHH
Confidence 66 2 26778889999999999988999999999999998 9999999999999
Q ss_pred HHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHH
Q 007612 207 LGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 207 lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~ 244 (596)
+|..++|.+++.+.+..+|++.|++.++..++..++.+
T Consensus 138 i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 138 IIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred HHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888999999887766555544433
No 70
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.87 E-value=9e-20 Score=196.67 Aligned_cols=353 Identities=14% Similarity=0.100 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhc---cCchH-HHHHHHHHHHHHHHHHH
Q 007612 51 GLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSY---WGRFK-TCAIFQGIFVIGLVLLS 126 (596)
Q Consensus 51 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~-~l~~~~~~~~~~~~~~~ 126 (596)
+..+.....+..+++.|+++++|+++.+++++.++..+...+..|+.|+++||. +|||| .++++....+++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 445556666778899999999999999999999999999999999999999983 27755 56777777777777776
Q ss_pred hhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCC-ccccccccchhhHHHHHHHHH
Q 007612 127 LSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYD-EEDAKEGHSKVAFFSYFYLAL 205 (596)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~~~~~~ 205 (596)
.. |+. .+......+++.+++.+++.+.......++..|..+ +++ |++..++.+...
T Consensus 89 ~~---~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~------R~~~~~~~~~~~ 145 (437)
T TIGR00792 89 TT---PDF--------------SATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE------RESLSTFRRFGA 145 (437)
T ss_pred hC---CCC--------------CcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH------HHHHHHHHHHHH
Confidence 55 220 011234566677778888888888888889899875 455 889999988888
Q ss_pred hHHHHHHhhhhhhhc-------ccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhcccc
Q 007612 206 NLGSLFSNTILGYFE-------DEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHL 278 (596)
Q Consensus 206 ~lg~~~~~~i~g~l~-------~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (596)
++|+.+++.+.+.+. +..+|++.+++.+++.++..++.+...++.+++++..++
T Consensus 146 ~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~------------------- 206 (437)
T TIGR00792 146 TLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE------------------- 206 (437)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc-------------------
Confidence 888877766555443 245899988877766555544433333321100000000
Q ss_pred CCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHH-HHHHhH
Q 007612 279 SAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLP-IWLCTI 357 (596)
Q Consensus 279 p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 357 (596)
+..+..+. + +.+.+.|.++.... .++...
T Consensus 207 --------------------------~~~~~~~~-------------------~-----~~l~~~~~~~~~~~~~~~~~~ 236 (437)
T TIGR00792 207 --------------------------KKLSLKQI-------------------F-----KALFKNDQLLILCLAYLFYNL 236 (437)
T ss_pred --------------------------cCCCHHHH-------------------H-----HHHhCCHHHHHHHHHHHHHHH
Confidence 00000000 0 00011122222211 111122
Q ss_pred hHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHH
Q 007612 358 LYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVI 437 (596)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l 437 (596)
.+.. ......++.....+ +.. ....+..+..+..++..++.+++ .+|.+ +++.+.++.++
T Consensus 237 ~~~~-~~~~~~~~~~~~~~-~~~------~~~~~~~~~~i~~ii~~~~~~~l----~~r~g--------~~~~~~~~~~~ 296 (437)
T TIGR00792 237 AFNI-KNGVQVYYFTYVLG-DPE------LFSYMGSIAIVAGLIGVLLFPRL----VKKFG--------RKILFAGGILL 296 (437)
T ss_pred HHHH-HcchhheeEeeecC-ChH------HHHHHHHHHHHHHHHHHHHHHHH----HHHhC--------cHHHHHHHHHH
Confidence 2221 12222333332211 100 01122223344455555555544 44444 33456777777
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCC-------chhHHHHHH
Q 007612 438 AIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAP-------DGLKSFGSA 510 (596)
Q Consensus 438 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~g 510 (596)
.+++++...+.. .+.+..++..++.+++.+...+..++++.|..+ ++.+|++.|
T Consensus 297 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 357 (437)
T TIGR00792 297 MVLGYLIFFFAG-------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYS 357 (437)
T ss_pred HHHHHHHHHHcc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHH
Confidence 777766554421 133445556677888888888888889888765 567899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 007612 511 LCMTSISLGNYVSSLLLTMVMKIS 534 (596)
Q Consensus 511 l~~~~~~lg~~lg~~l~~~i~~~~ 534 (596)
+.++...+|..+++.+.+.+.+..
T Consensus 358 ~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 358 VRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999887755
No 71
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=8.3e-20 Score=194.64 Aligned_cols=390 Identities=12% Similarity=0.043 Sum_probs=231.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.+|......++...++..+.++++.|+++++|+++.+.+++.+...++..+++++.|+++||+ |||+.++.+....++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4578888888888888888999999999999999999999999999999999999999999997 999999887666555
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+..........+.. ........++++++.|++.+...+....+..|..+ + ++..++.
T Consensus 81 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~~~g~ 137 (396)
T TIGR00882 81 LFAPFFIYVFGPLL---------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNFEYGK 137 (396)
T ss_pred HHHHHHHHHhhhHH---------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------cccccch
Confidence 44332211000100 00113345666788888888888888777666422 2 3345667
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCC
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSA 280 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 280 (596)
.....++|..++|.++|.+.+ .+|++.|++.+++.++..++.+...++.+++ +...+ ..+
T Consensus 138 ~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---------------~~~ 197 (396)
T TIGR00882 138 ARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSS----ATVAN---------------ALG 197 (396)
T ss_pred hhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchh----hhhhc---------------ccc
Confidence 777889999999999998765 5999999988766555544443322221110 00000 000
Q ss_pred CcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHH-HHHHhHhH
Q 007612 281 EGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLP-IWLCTILY 359 (596)
Q Consensus 281 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 359 (596)
+ . . +..+..+.. ++.+.|.++.... .+.....+
T Consensus 198 ~----------------~----~-~~~~~~~~~-------------------------~~l~~~~~~~~~l~~~~~~~~~ 231 (396)
T TIGR00882 198 A----------------N----A-SAFSLKLAL-------------------------ELFRQRKFWMFVLYVVGVACVY 231 (396)
T ss_pred c----------------c----c-CCCCHHHHH-------------------------HHHcCCcHHHHHHHHHHHHHHH
Confidence 0 0 0 000000000 0001122211111 11112222
Q ss_pred hhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHH
Q 007612 360 SVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAI 439 (596)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~ 439 (596)
.....+.+.++.......... ....+.......+...+.....+ ++.||.+ +++.+.++.++.+
T Consensus 232 ~~~~~~~~~y~~~~~~~~~~~----~~~~g~~~~~~~i~~~~~~~~~g----~l~~r~g--------~~~~l~~~~~l~~ 295 (396)
T TIGR00882 232 DVFDQQFANFFTSFFATPQQG----TRVFGYVTTMGELLNALIMFCAP----LIINRIG--------AKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHHHHHHhccccccc----hHHHHHHHHHHHHHHHHHHHHHH----HHHHHhc--------cchhHHHHHHHHH
Confidence 222122222111100000000 00011122222233333334444 3444544 2334667777777
Q ss_pred HHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHH-HHHHHHH
Q 007612 440 VAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSAL-CMTSISL 518 (596)
Q Consensus 440 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl-~~~~~~l 518 (596)
+.+...... .+.+++.+..++.+++.........++..+..|++.++++.+. +++...+
T Consensus 296 l~~~~~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l 355 (396)
T TIGR00882 296 VRIIGSSFA--------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL 355 (396)
T ss_pred HHHHHHHhc--------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH
Confidence 766554432 2455566667788888777777777788888999999887776 6788999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Q 007612 519 GNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIA 572 (596)
Q Consensus 519 g~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~ 572 (596)
|+.+++.+.|.+.+. .+++..|.+.+++.++..++..+
T Consensus 356 g~~~~~~l~G~l~~~----------------~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 356 AMIFLSTLAGNMYDS----------------IGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHhHHHHHHh----------------cccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988762 24567888888887777666544
No 72
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=9.2e-20 Score=192.59 Aligned_cols=156 Identities=18% Similarity=0.167 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 007612 59 GVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRG 138 (596)
Q Consensus 59 ~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (596)
.+.+.+|.+. +++|+++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++..++.++ +
T Consensus 9 ~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~---~------ 77 (377)
T PRK11102 9 MYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALA---Q------ 77 (377)
T ss_pred HHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHH---c------
Confidence 3456666665 57999999999999999999999999999999997 99999999999999988888776 2
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhh
Q 007612 139 CGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGY 218 (596)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~ 218 (596)
+.+.+++.|++.|++.+...+...+++.|++|+++ |++.+++.+...++|..++|.++++
T Consensus 78 --------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~ 137 (377)
T PRK11102 78 --------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGW 137 (377)
T ss_pred --------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37778899999999999999999999999999988 9999999999999999999999999
Q ss_pred hcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 219 FEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 219 l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
+.+..+|++.|++.++..++..++...
T Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 138 LLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 998889999998877665555444433
No 73
>PRK10133 L-fucose transporter; Provisional
Probab=99.87 E-value=1.7e-19 Score=194.75 Aligned_cols=153 Identities=12% Similarity=0.044 Sum_probs=123.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIF 118 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~ 118 (596)
....++.+.+..+...+........+| .+++++|.|+.+.++..+.+.++..+++++.|+++||+ ||||++.++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 334556666666666666655555555 45899999999999999999999999999999999997 9999999999999
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
+++.+++...... +++..++++|+++|+|.|...+..++++.|..|+++ |...+
T Consensus 102 ~~~~~l~~~~~~a--------------------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~ 155 (438)
T PRK10133 102 ALGAALFWPAAEI--------------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRL 155 (438)
T ss_pred HHHHHHHHHHHhc--------------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHH
Confidence 9998776432111 238889999999999999999999999998766655 66678
Q ss_pred HHHHHHHhHHHHHHhhhhhhh
Q 007612 199 SYFYLALNLGSLFSNTILGYF 219 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l 219 (596)
++.+....+|..+||.+++.+
T Consensus 156 s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 156 NLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 888888889999998887654
No 74
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.87 E-value=1.9e-19 Score=196.46 Aligned_cols=379 Identities=15% Similarity=0.128 Sum_probs=242.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 007612 44 IIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLV 123 (596)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~ 123 (596)
..+.+.+...+++......-++-++. ++.-|+...+.+.....+-..+..+++|.++||+ .|||+++.+.++..+...
T Consensus 13 r~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~ 90 (524)
T PF05977_consen 13 RRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVAL 90 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHH
Confidence 33444455555554444444443443 5567888999999999999999999999999997 999999999887776655
Q ss_pred HHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHH
Q 007612 124 LLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYL 203 (596)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 203 (596)
.+++...... .+.+.+++..++.|++.+...|+..+++.+.+|+++ ..++.++.+.
T Consensus 91 ~L~~l~~~~~------------------~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~ 146 (524)
T PF05977_consen 91 LLAVLAFFGL------------------LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSI 146 (524)
T ss_pred HHHHHHHhCc------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHH
Confidence 5554322122 347888888999999999999999999999999998 8999999999
Q ss_pred HHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcc
Q 007612 204 ALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGE 283 (596)
Q Consensus 204 ~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 283 (596)
..|+...+||.++|.+....|-.++|.+.++..++.+.++...+++.++++ .+.+.+.+.++...+.
T Consensus 147 ~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~---~~~e~~~~~l~~G~ry---------- 213 (524)
T PF05977_consen 147 SFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSS---LPRERFFSALREGLRY---------- 213 (524)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc---cchhhhhhhHHHHHHH----------
Confidence 999999999999999988889899999888776665554444333221111 0101100000000000
Q ss_pred cchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHH-HHHhHhHhhh
Q 007612 284 DLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPI-WLCTILYSVV 362 (596)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 362 (596)
+.+.+.+...+.. +++.......
T Consensus 214 --------------------------------------------------------v~~~~~l~~~l~~~~~~~l~~~a~ 237 (524)
T PF05977_consen 214 --------------------------------------------------------VRSSPPLRSVLLRSFLFNLFASAV 237 (524)
T ss_pred --------------------------------------------------------HhcchHHHHHHHHHHHHHHhhhHH
Confidence 0001111111111 1111111111
Q ss_pred hccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHH
Q 007612 363 FTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAM 442 (596)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~ 442 (596)
...+ +.+..+..+.+ ....+.+....+++.++.+.+..+ +.+|.. ..+.+..+.++.++++
T Consensus 238 ~aLl-Pl~a~~~l~~~------a~~yGll~a~~gvGai~Gal~~~~----l~~~~~--------~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 238 WALL-PLFARDVLGGG------ASGYGLLLAAFGVGAILGALLLPR----LRRRLS--------SRRLVLLASLLFALAL 298 (524)
T ss_pred HHhh-hHHHHHHhCCc------HHHHHHHHHHHHHHHHHHHHHHHH----hhcccC--------cchhhHHHHHHHHHHH
Confidence 1111 11111111111 111223333444555555555443 223322 3345667777777777
Q ss_pred HHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Q 007612 443 LAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYV 522 (596)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l 522 (596)
+.+++. .+.+..++.+++.|++.....+...+...+..|+++||++.|++.+....+..+
T Consensus 299 ~~lal~--------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~l 358 (524)
T PF05977_consen 299 LLLALS--------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPL 358 (524)
T ss_pred HHHhcc--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHH
Confidence 776653 245666778888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Q 007612 523 SSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIA 572 (596)
Q Consensus 523 g~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~ 572 (596)
|.++.|.+.+.. +....+.+.++..+++.++.+.
T Consensus 359 Gsll~G~la~~~----------------g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 359 GSLLWGFLADHF----------------GVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHh----------------CHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887632 3344565555555555544443
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.86 E-value=3.7e-19 Score=190.95 Aligned_cols=390 Identities=11% Similarity=0.060 Sum_probs=223.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 007612 46 ILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLL 125 (596)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~ 125 (596)
+.+..++...++-.+.++++.|+++++|++..+.|++.+.+.++..+++++.|+++||+.+||+++.++.++..++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 34445555566666779999999999999999999999999999999999999999997234778888777776776666
Q ss_pred HhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccC--------CccccccccchhhH
Q 007612 126 SLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQY--------DEEDAKEGHSKVAF 197 (596)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~--------~~~~~~~~~~r~~~ 197 (596)
.+. +++..+++.|++.+++.+...+...++..+.. .... |.+.
T Consensus 87 ~~~-----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~------~~r~ 137 (418)
T TIGR00889 87 AQV-----------------------TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP------PIRV 137 (418)
T ss_pred HHh-----------------------cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC------Ceee
Confidence 655 22666778888888877766666555433222 1112 4444
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccc
Q 007612 198 FSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVH 277 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (596)
+| .+|.++||.++|.+.....|. +|++.++..++..++.+ ..++.++.+++.+. +
T Consensus 138 ~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~--~--------------- 192 (418)
T TIGR00889 138 MG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFAL-TLPDIPVAKSTAKM--S--------------- 192 (418)
T ss_pred eh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHh-cCCCCCCCcccccc--C---------------
Confidence 43 478888888888774333344 45555544444443322 22221110000000 0
Q ss_pred cCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhh-HHHHHHh
Q 007612 278 LSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRL-LPIWLCT 356 (596)
Q Consensus 278 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 356 (596)
. .+..+ .+.. ...+.++.+.. +..++..
T Consensus 193 -----------------------~--~~~~~-~~~~-------------------------~~~k~~~~~~~~~~~~~~~ 221 (418)
T TIGR00889 193 -----------------------I--KVMLG-LDAF-------------------------ILFKNKRMAIFFFFSMLLG 221 (418)
T ss_pred -----------------------H--HHHhh-hhHH-------------------------HHhcCCCeeeHHHHHHHHH
Confidence 0 00000 0000 00000111111 1111111
Q ss_pred HhHhhhhccccceeEeeecccccccc-ccc-cCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHH
Q 007612 357 ILYSVVFTQMASLFVEQGAAMKTTVS-NFR-IPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIG 434 (596)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig 434 (596)
..........+. +... .+.+.... ++. ...+....+..+..++...+.++ +.+|.+ +++.+.++
T Consensus 222 ~~~~~~~~~~~~-~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~----l~dr~g--------~r~~l~~~ 287 (418)
T TIGR00889 222 APLQITNIFGNG-FLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPF----FLKRFG--------IKKVMLLS 287 (418)
T ss_pred hHHHHHHHhHHH-HHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH----HHHHhC--------cHHHHHHH
Confidence 111111111111 1110 00010000 000 00122222233333444444444 444544 44557788
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHH-
Q 007612 435 LVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCM- 513 (596)
Q Consensus 435 ~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~- 513 (596)
.++.++++..+.... ......+.+++..++.+++++...+....++.|.+|++.||+++|+.+
T Consensus 288 ~~~~~v~~~l~~~~~----------------~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~ 351 (418)
T TIGR00889 288 LVAWALRFGFFAYGD----------------PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTL 351 (418)
T ss_pred HHHHHHHHHHHHHcC----------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 877777766555421 000122334556788899998888888899999999999999999997
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhccccccc
Q 007612 514 TSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKCI 580 (596)
Q Consensus 514 ~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~ 580 (596)
+...+|+.+|+.+.|.+.+..+.+. ..+|+..|++.+++.+++.+.++++.++.++.
T Consensus 352 ~~~~lg~~iGp~l~G~l~~~~g~~~----------~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 352 MCNGFGSLLGYILSGVMVEKMFAYG----------TFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHhhHHHHHHHHHHHHHHHhcccc----------CCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 5678999999999998876432111 12467888888888888888888888766444
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.86 E-value=1.5e-19 Score=217.95 Aligned_cols=340 Identities=14% Similarity=0.078 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH--HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhH
Q 007612 77 AEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG--IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEI 154 (596)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (596)
...++..+.+.+...++++++|+++||+ |||+++..... +......+.++. . .++
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~--~--------------------~s~ 108 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFH--L--------------------NSV 108 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHH--H--------------------hhH
Confidence 3467778888999999999999999997 99997643222 222222222221 0 238
Q ss_pred HHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHH
Q 007612 155 CLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTG 234 (596)
Q Consensus 155 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~ 234 (596)
+.++++|+++|++.+...|+..+++.+++|+++ |++++|+.+++.++|.++||.++|++.+..+|++.|+..++
T Consensus 109 ~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~ 182 (1140)
T PRK06814 109 PLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMG 182 (1140)
T ss_pred HHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 889999999999999999999999999999998 99999999999999999999999999999999998855444
Q ss_pred HHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCccccccccchhhhhh
Q 007612 235 SAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAA 314 (596)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (596)
..++++++.+...+. +..++..+...... .+..
T Consensus 183 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------------------------------------------~~~~- 215 (1140)
T PRK06814 183 IAVLGWLASLFIPKT-GNAAPDLKIDRNII---------------------------------------------RSTI- 215 (1140)
T ss_pred HHHHHHHHHhhCCCC-CCCCCCCeeccchH---------------------------------------------HHHH-
Confidence 444444433332221 11100000000000 0000
Q ss_pred hhccccccccccCCCCCCcccCccchhhhhhhhhh-HHHHHHhHhHhhhhccccceeEeeeccccccccccccCCccccc
Q 007612 315 YISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRL-LPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSS 393 (596)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (596)
..++ .+...+.++.. +..+.....+.....+++.+. ....+.+. ...+.+..
T Consensus 216 ---------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~g~~~------~~~g~~~~ 268 (1140)
T PRK06814 216 ---------------TLLK-----YAKADKRIWLAILGISWFWLVGAVVLSQLPLLA-KETLGGDE------NVATLFLA 268 (1140)
T ss_pred ---------------HHHH-----HHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHcCCch------HHHHHHHH
Confidence 0000 00011112111 111122222222222322221 11111111 11233344
Q ss_pred cchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhcccCCCCCCCceeehh
Q 007612 394 FDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECY-RLKYAKTECKHCEGASSLSIF 472 (596)
Q Consensus 394 ~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 472 (596)
...++.++...+.+++. ++.. ....+..+.++.++..+.+++.... ......-.....- ....+.+
T Consensus 269 ~~~~g~~ig~~~~g~l~----~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 335 (1140)
T PRK06814 269 VFSVGVAVGSFLASKLS----EGRI--------TLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVF-LSKRHGW 335 (1140)
T ss_pred HHHHHHHHHHHHHHHHh----CCce--------eeeeehHHHHHHHHHHHHHHhcccccccccccccchhhh-hcccccH
Confidence 44556666666666543 2221 1112333333333333222221000 0000000000000 0012445
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007612 473 WQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMK 532 (596)
Q Consensus 473 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~ 532 (596)
.+++.+++.|++.++..+...+++.+.+|++.+|+++|+.++.+.+|..+++.+.+.+..
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 336 RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666778888999999999999999999999999999999999999999999999887753
No 77
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.86 E-value=2.5e-19 Score=216.23 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=123.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCh--HHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNN--AEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIF 118 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~--~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~ 118 (596)
+.+...++..++.++...+....+..++...++.+. ...+++.+++.++..++++++|+++||+ |||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHH
Confidence 455555666666666555555555556665666554 3468889999999999999999999997 9999999888766
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
+++.++..++... .+.+.++++|++.|++.+...++..+++.|++|+++ |++++
T Consensus 88 ~~~~~~~~~~~~~--------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~ 141 (1146)
T PRK08633 88 VGLTLLIVLAYYL--------------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRAN 141 (1146)
T ss_pred HHHHHHHHHHHHH--------------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhh
Confidence 6655554443111 237889999999999999999999999999999998 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhccc
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDE 222 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~ 222 (596)
++...+.++|.++|+.+++++.+.
T Consensus 142 ~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 142 GLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988765
No 78
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.7e-21 Score=200.13 Aligned_cols=184 Identities=16% Similarity=0.201 Sum_probs=162.2
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHH
Q 007612 35 AKSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIF 114 (596)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~ 114 (596)
..+...+.+.+++++..++...-|.+.... .-.++.+|+++++.|++...+.+...++.|+.|+++||| .||+++.+|
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG 104 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVG 104 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeH
Confidence 344555678888888999988888886643 456788999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccch
Q 007612 115 QGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSK 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 194 (596)
..++.++.++.+++ .+++.+.++|.+.|+|.+.+.|.++++++|.||..+ |
T Consensus 105 ~~iW~~Av~~~~fs-----------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------R 155 (493)
T KOG1330|consen 105 IFIWTLAVFASGFS-----------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------R 155 (493)
T ss_pred HHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------h
Confidence 99999999999988 348999999999999999999999999999999999 9
Q ss_pred hhHHHHHHHHHhHHHHHHhhhhhhhccccc-chHHHHHHHHHHHHHHHHHHhcCcc
Q 007612 195 VAFFSYFYLALNLGSLFSNTILGYFEDEGM-WALGFWVSTGSAFAALVLFLAGTTR 249 (596)
Q Consensus 195 ~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~ 249 (596)
++.++++|++.++|.++|.++++++....+ |||.|+..+++.++..++.++..++
T Consensus 156 s~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 156 SRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred hHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccC
Confidence 999999999999999999999999988766 9999999887776666665555443
No 79
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.86 E-value=1.3e-18 Score=190.48 Aligned_cols=177 Identities=15% Similarity=0.136 Sum_probs=138.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhc----cCchHH-HHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSY----WGRFKT-CAI 113 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~----~Gr~~~-l~~ 113 (596)
.+|+.+.++...+.+....+.....++.+++ +.|.|..+.+... ..... .++.++.|.++||+ .||||. +.+
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHcccccCCCCchHHHHH
Confidence 3445667777888888888888888888876 4599998888863 23222 36889999999994 188875 667
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccc
Q 007612 114 FQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHS 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 193 (596)
+.+..+++...+++.. |. .+.+.+.+.+++.+++.+...+...++..|++|+++
T Consensus 87 ~~i~~~~~~~~~a~~~--~~------------------~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------ 140 (491)
T PRK11010 87 TQLLLLVAIAAMGFLE--PG------------------TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------ 140 (491)
T ss_pred HHHHHHHHHHHHHHcC--Cc------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------
Confidence 7767767766666651 11 347778888999999999999999999999999988
Q ss_pred hhhHHHHHHHHHhHHHHHHhhhhhhhcc-cccchHHHHHHHHHHHHHHHHHH
Q 007612 194 KVAFFSYFYLALNLGSLFSNTILGYFED-EGMWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 194 r~~~~~~~~~~~~lg~~~~~~i~g~l~~-~~~~~~~f~~~~~~~~~~~~~~~ 244 (596)
|+++.++...+.++|..+++.+++++.+ ..|||..|++.++..++..+..+
T Consensus 141 rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 141 RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888 57999999988766555544433
No 80
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.85 E-value=3.7e-21 Score=203.26 Aligned_cols=365 Identities=35% Similarity=0.563 Sum_probs=236.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccc
Q 007612 108 FKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEED 187 (596)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 187 (596)
.|+++++.++..+|.+++.+++..+. .+++.+...++++.++.++|.|+..|+..++.+|++++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~--------------~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~ 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPS--------------LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSS--------------C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcch--------------hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc
Confidence 37889999999999999887754222 2334457789999999999999999999999999999873
Q ss_pred cccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceecc-CCCCChhHH-HHH
Q 007612 188 AKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHF-KPSGNPLAR-FCQ 265 (596)
Q Consensus 188 ~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~ 265 (596)
+ ..|.++|+++|++.|+|+.+++.+.+++.+.+||.+.|.++.+..+++++.++..+++++++ +|.+.+..+ ...
T Consensus 67 ~---~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~ 143 (372)
T PF00854_consen 67 D---SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKL 143 (372)
T ss_dssp T---THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHH
T ss_pred h---hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHH
Confidence 1 11889999999999999999999999999999999999999999999999999988888887 566666665 444
Q ss_pred HHHHHHHhhccccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCc-ccCccchhhhh
Q 007612 266 VIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWR-LCPVTQVEEVK 344 (596)
Q Consensus 266 ~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 344 (596)
+.....+++....|....++.......+...... ..... ........+. ..|. .+..++++..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~~k 208 (372)
T PF00854_consen 144 VLVAAFKKRKLAVPKGSSWLDWALFQYSERSIFG------IIVFI-RAAVIFFPEI--------FFWALFCQVQRVEELK 208 (372)
T ss_dssp HHHHHHHHHCCCH-HHHHHHHHHHHHHCCCCCCC------CCCHH-HHHHHHCCCH--------HHHTTTSSTTTHHHCC
T ss_pred HHHHHHHHhhcccccchHHHHHhhhhhhhhhhhh------hhhhc-cchhhhhhhh--------hhcccCCccceeeeee
Confidence 5555555555554433333322211110000000 00000 0111111100 0010 02233445666
Q ss_pred hhhhhHHHHHHhHhHhhhhccccceeEeeeccccccccc-cccCCccccccchhhHHHHHHhhhhhhhcccccccccCCC
Q 007612 345 CILRLLPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSN-FRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSK 423 (596)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~ 423 (596)
.+.+.++.+...+.+.+...+.+.+...+...++..+.+ +..+++.++.++.+..+++.|+.+++++|+.++ + .
T Consensus 209 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~-~----~ 283 (372)
T PF00854_consen 209 ALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRR-G----I 283 (372)
T ss_dssp HHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT-------
T ss_pred eeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhh-c----c
Confidence 777777777777888888888777777777777767777 889999999999999999999999999998873 2 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCch
Q 007612 424 GLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDG 503 (596)
Q Consensus 424 ~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~ 503 (596)
..+...++.+|++++.++++..+.++..+....... ...+.+|.++.+++..++|-+..+...+...|.+|++
T Consensus 284 ~~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~ 356 (372)
T PF00854_consen 284 QPSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPC-------GKVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSR 356 (372)
T ss_dssp ----HHHHHHH-HHHHHHHHTTTHHHH---HH-----------TT--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHhhhhhccccc-------CCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHh
Confidence 345888999999999999988887765433333221 1234477789999999999999998888777777777
Q ss_pred hHHHHHHHHHHHH
Q 007612 504 LKSFGSALCMTSI 516 (596)
Q Consensus 504 ~rg~~~gl~~~~~ 516 (596)
..+..+|+++...
T Consensus 357 ~p~~m~~~~~~~~ 369 (372)
T PF00854_consen 357 APSSMMGIWFALS 369 (372)
T ss_dssp -SSSSTHHHHHHH
T ss_pred hhHHHHHHHHHHh
Confidence 7777777665543
No 81
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.85 E-value=1.1e-19 Score=191.11 Aligned_cols=160 Identities=13% Similarity=0.129 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
..++.++..+......+...+++|.++++++|+|+.+.+++.+.+.++..++.++.|+++||+ |||+.++++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 456777777777888888888888789999999999999999999999999999999999997 9999999999999999
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.++++++ + .+.+.++++|+++|++.+.. +...++++|++|+++ |+++.+++
T Consensus 81 ~~~~~~~---~-------------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~~~~ 131 (366)
T TIGR00886 81 CLWAGLA---V-------------------QSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTALGLA 131 (366)
T ss_pred HHHHHHH---h-------------------hhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHHHHH
Confidence 8888877 2 03788889999999986654 667889999999988 99999998
Q ss_pred HHHHhHHHHHHhhhhhhhcc----------cccchHHHHH
Q 007612 202 YLALNLGSLFSNTILGYFED----------EGMWALGFWV 231 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l~~----------~~~~~~~f~~ 231 (596)
....++|..+++.+++.+.. ..+|++.|++
T Consensus 132 ~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 132 AGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 87778888877777665543 3489999944
No 82
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.85 E-value=1.2e-24 Score=235.68 Aligned_cols=399 Identities=15% Similarity=0.113 Sum_probs=241.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHH
Q 007612 77 AEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICL 156 (596)
Q Consensus 77 ~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (596)
.+.++..+...++..++++++|+++||+ |||++++++.++..++.++..++... .+.+.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~--------------------~~~~~ 104 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY--------------------NNFWM 104 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc--------------------ccccc
Confidence 3468899999999999999999999997 99999999999999999999888210 13788
Q ss_pred HHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc---ccchHHHHHHH
Q 007612 157 FYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE---GMWALGFWVST 233 (596)
Q Consensus 157 l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~---~~~~~~f~~~~ 233 (596)
+.++|++.|++.|+..+....++.|..|++. |+...++.+....+|..++..++-.+.+. .+||+.+.+..
T Consensus 105 ~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~ 178 (451)
T PF00083_consen 105 LLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGA 178 (451)
T ss_pred ccccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999 99999999999999998887665444333 34998888776
Q ss_pred HHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCccccccccchhhhh
Q 007612 234 GSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRA 313 (596)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (596)
+..++.++... .+||+|+|+..+++.|++.+..+++.+.+..+. +..
T Consensus 179 ~~~l~~~~~~~--------------------------------~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~-~~~ 225 (451)
T PF00083_consen 179 IPSLLVLLLRF--------------------------------FLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDE-EIE 225 (451)
T ss_pred ccccccccccc--------------------------------ccccccceecccccccccccccccccccccccc-ccc
Confidence 55443322211 189999999999999999988888544321110 000
Q ss_pred hhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHh-hhhccccceeEeeeccccccccccccCCc-cc
Q 007612 314 AYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYS-VVFTQMASLFVEQGAAMKTTVSNFRIPPA-SM 391 (596)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 391 (596)
.....++ ..+..+..|+...... ..+++++..+.+........ .....+.+..... . +.... ..
T Consensus 226 ~~~~~~~---~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~---------~~~~~~~~ 291 (451)
T PF00083_consen 226 EIKAEKK---ESQESKASWRDLFRNK-KYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-A---------GISNSFLA 291 (451)
T ss_pred ccccccc---cccccceeeeeccccc-cccccccccccccccccccccccccccccccccc-c---------cccccccc
Confidence 0000000 0001112232221111 11223222222211111111 0111111111111 1 11111 11
Q ss_pred cccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHH-HHhhhhhhhcccCCCCCCCceee
Q 007612 392 SSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGI-VECYRLKYAKTECKHCEGASSLS 470 (596)
Q Consensus 392 ~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 470 (596)
+....+...+...+.. .+.+|.+ ||+ .+..+..+++++.+.++. .... .. .....+
T Consensus 292 ~~~~~~~~~~~~~~~~----~~~~~~G-Rr~-------~~i~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~ 348 (451)
T PF00083_consen 292 TLILGLVNFLGTLLAI----FLIDRFG-RRK-------LLIIGLLLMAICSLILGIIFFLG-----VS------SSSWWS 348 (451)
T ss_pred cccccccccccccccc----ccccccc-ccc-------ccccccccccccccccccccccc-----cc------cccccc
Confidence 1111111111211222 3344554 332 366677766666655541 1000 00 000011
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCc
Q 007612 471 IFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKG 550 (596)
Q Consensus 471 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~ 550 (596)
...+...............+..+.+..|.+|.+.|+++.|+....+++++.+++.+.+.+.+..
T Consensus 349 ~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~---------------- 412 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL---------------- 412 (451)
T ss_pred cccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------------
Confidence 2222222122222222345677788899999999999999999999999988887766544311
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcccccccchhhhhhh
Q 007612 551 HLDRFYFLLAGLTTVDFVVYIACAKWYKCIELEAKCAE 588 (596)
Q Consensus 551 ~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 588 (596)
+....|+..++++++..++.+++.+|+|++++||.++.
T Consensus 413 ~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 413 GGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred cccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 11235677788888988999999999999999987653
No 83
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.85 E-value=2.8e-19 Score=182.73 Aligned_cols=392 Identities=14% Similarity=0.011 Sum_probs=255.3
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH
Q 007612 37 SGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG 116 (596)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~ 116 (596)
+.++|.++.... .+...+....+.+.+.+++++++|+|+.|.+++.++..+...+..++-|++.||+ |.|++..++.+
T Consensus 10 ~~~~~~L~~S~~-af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~ 87 (417)
T COG2223 10 RIARRNLWLSTL-AFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSML 87 (417)
T ss_pred cchhHHHHHHHH-HHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHH
Confidence 345555554433 3334444445556677788899999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
+.++-.+.++++.+.|+ .+.+++.+.+.|++ |+.+....+.++.+||+|+ +|.
T Consensus 88 l~~IP~~~~~~a~~~~~--------------------~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~------qG~ 140 (417)
T COG2223 88 LLLIPCLGLAFAVTYPS--------------------TWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEK------QGL 140 (417)
T ss_pred HHHHHHHHHHHHccCCc--------------------hHHHHHHHHHHhcc-cceehcccccccccCChhh------hhH
Confidence 99999999999865444 57888899999988 5567888999999999999 999
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhccccc---chHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHh
Q 007612 197 FFSYFYLALNLGSLFSNTILGYFEDEGM---WALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKK 273 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i~g~l~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (596)
+++++. ..|+|..+...++..+....+ |+.+..+..+..++..+..++..+..++.++..++..
T Consensus 141 AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~------------ 207 (417)
T COG2223 141 ALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL------------ 207 (417)
T ss_pred HHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc------------
Confidence 999999 899999999999998888888 9988888887777777777666554333222111100
Q ss_pred hccccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHH
Q 007612 274 WRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIW 353 (596)
Q Consensus 274 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (596)
| .++ +.+..++..+.+..+-
T Consensus 208 -----~----------------------------~~~---------------------------~~v~~~~~~W~lsllY 227 (417)
T COG2223 208 -----P----------------------------AQL---------------------------KAVFSNKDTWLLSLLY 227 (417)
T ss_pred -----h----------------------------hHH---------------------------HHHhcCcchHHHHHHH
Confidence 0 000 0011112222222222
Q ss_pred HHhHhHhhhhc-cccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHH
Q 007612 354 LCTILYSVVFT-QMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMG 432 (596)
Q Consensus 354 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ 432 (596)
..+..-++.+. +++.++..+ ...+ ....+......+....+.=|+.+++ .||++ ..+.+.
T Consensus 228 ~~tFG~Fvgfs~~l~~~~~~~-fg~~------~~~Ag~~a~~f~~~g~l~Rp~GG~L----sDR~G--------g~rv~~ 288 (417)
T COG2223 228 FATFGGFVGFSAYLPMYLVTQ-FGLS------PVTAGLIAFLFPLIGALARPLGGWL----SDRIG--------GRRVTL 288 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCC------hhhHHHHHHHHHHHHHHHHhccchh----hhhcc--------chhHHH
Confidence 22222222221 111111111 1111 1112233333344444444555543 44544 444566
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHH
Q 007612 433 IGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALC 512 (596)
Q Consensus 433 ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~ 512 (596)
+.+..++++.......... + ....+....+..++.+++..+..+-..+-++..++|+ +.|.+.|+.
T Consensus 289 ~~f~~~~~~~~~l~~~~~~------------~-~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~v 354 (417)
T COG2223 289 AVFVGMALAAALLSLFLTG------------F-GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIV 354 (417)
T ss_pred HHHHHHHHHHHHHHccccc------------c-ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHH
Confidence 6777777776666543210 0 0012333334444445555555555556666667764 689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhccccc
Q 007612 513 MTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYK 578 (596)
Q Consensus 513 ~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~ 578 (596)
...+.+|+++-|...+...+.+ +.++..|+.+..+.+++.+..+..+.+.+
T Consensus 355 ga~G~lGGf~lp~~~g~~~~~t---------------g~~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 355 GAIGGLGGFFLPLAFGVSLDLT---------------GSYTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred HHhccccccchhHHHHHHHHhc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999776643 34577899999999999988887766543
No 84
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.84 E-value=2.2e-18 Score=182.90 Aligned_cols=336 Identities=11% Similarity=0.048 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCch----HHHHHHHHHHHHHHHHH
Q 007612 50 QGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRF----KTCAIFQGIFVIGLVLL 125 (596)
Q Consensus 50 ~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~----~~l~~~~~~~~~~~~~~ 125 (596)
.++...++..+.+++|.|++ ++|.|..+.|++.+.+.+...+++++.|+++||+ ||+ +.+.+...+. ...+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~---~~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF---AVAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH---HHHH
Confidence 44444556677788999985 5899999999999999999999999999999997 984 3332221111 1111
Q ss_pred HhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHH
Q 007612 126 SLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLAL 205 (596)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 205 (596)
... .++.+.+++.|++.|++.+...|...++..++ +++ |++.++..+...
T Consensus 88 ~~~----------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~~~~~~ 137 (382)
T PRK11128 88 WFG----------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGKVRLWG 137 (382)
T ss_pred HHh----------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcchHHHHH
Confidence 111 13478888899999999998999888887776 334 667777778888
Q ss_pred hHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccc
Q 007612 206 NLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDL 285 (596)
Q Consensus 206 ~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 285 (596)
++|.++||.+++++.+++||+..|++.++..++..+... ..++. +|++++. ++
T Consensus 138 ~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~-~~~~~---~~~~~~~--------------------~~--- 190 (382)
T PRK11128 138 SIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQL-LRPTI---MPQGESR--------------------QQ--- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-ccCCC---CCccccc--------------------cc---
Confidence 999999999999999999999999877654443333222 22211 1100000 00
Q ss_pred hhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHH-HHHHhHhHhhhhc
Q 007612 286 YVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLP-IWLCTILYSVVFT 364 (596)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 364 (596)
. + ... ..+ .++.+.|..+.... .++....+.....
T Consensus 191 -----~-------~----~~~-----------------------~~~-----~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 226 (382)
T PRK11128 191 -----E-------S----AGW-----------------------PAW-----KALLKEPTVWRFLLCVSLLQGSHAAYYG 226 (382)
T ss_pred -----c-------c----ccc-----------------------chH-----HHHHcChhHHHHHHHHHHHHHHhHhHHH
Confidence 0 0 000 000 00111122222211 1122222222222
Q ss_pred cccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHH
Q 007612 365 QMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLA 444 (596)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~ 444 (596)
..+. +..+ .+.+.. ..+.+..+..+..++...+.+ ++.||++ .++.+..+.++.+++++.
T Consensus 227 ~~~~-~~~~-~g~s~~------~~g~~~~~~~~~~~~~~~~~g----~l~~r~~--------~~~~l~~~~~~~~~~~~~ 286 (382)
T PRK11128 227 FSAI-YWQA-AGYSAS------TIGYLWSLGVVAEVLIFAFSN----RLFRRWS--------ARDLLLLSAICGVVRWGL 286 (382)
T ss_pred HHHH-HHHH-CCCCHh------HHHHHHHHHHHHHHHHHHHHH----HHHHHCC--------HHHHHHHHHHHHHHHHHH
Confidence 1111 1111 111111 111222222233333333333 4455554 555677787777777666
Q ss_pred HHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHH-HHHHHHHHHH
Q 007612 445 AGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCM-TSISLGNYVS 523 (596)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~-~~~~lg~~lg 523 (596)
.+.. .+.+.+++..++.|++.+...+....+..+. |++.+++.+++.+ ....+|..+|
T Consensus 287 ~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig 345 (382)
T PRK11128 287 MGST--------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIM 345 (382)
T ss_pred HHhh--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHH
Confidence 5542 2455666778888999999889988888887 5566789999887 4467788999
Q ss_pred HHHHHHHHh
Q 007612 524 SLLLTMVMK 532 (596)
Q Consensus 524 ~~l~~~i~~ 532 (596)
+.+.|.+.+
T Consensus 346 ~~i~G~l~~ 354 (382)
T PRK11128 346 TVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHH
Confidence 999998876
No 85
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.83 E-value=1.5e-17 Score=177.61 Aligned_cols=167 Identities=17% Similarity=0.116 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhcc----CchH-HHHHHHHHHHH
Q 007612 46 ILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYW----GRFK-TCAIFQGIFVI 120 (596)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~----Gr~~-~l~~~~~~~~~ 120 (596)
.+..++.+.+.+.....-+|.|+++ .|+|..+.|++...... .+..++.|+++||+. |||| .++++.++.++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 4566777788888888889999974 69999999999776665 689999999999951 6665 68888888877
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+...+.+... ..+.+.+++..++.++..+...++..+++.|++|+++ |+++.++
T Consensus 81 ~~~~l~~~~~--------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~ 134 (402)
T PRK11902 81 SIAAMAFCPP--------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAV 134 (402)
T ss_pred HHHHHHhcCc--------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHH
Confidence 7777666511 1235666667677788888889999999999999998 9999999
Q ss_pred HHHHHhHHHHHHhhhhhhhccc-ccchHHHHHHHHHHHHHHH
Q 007612 201 FYLALNLGSLFSNTILGYFEDE-GMWALGFWVSTGSAFAALV 241 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~-~~~~~~f~~~~~~~~~~~~ 241 (596)
...+.++|..+++.+++++.+. .||+..|++.++..++..+
T Consensus 135 ~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 135 KVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888875 5999999987766554443
No 86
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.83 E-value=9.3e-18 Score=179.58 Aligned_cols=170 Identities=11% Similarity=0.048 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGL 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~ 122 (596)
+++++...+...+.+....+.+ +.+++++|+++.+.+++.+.+.++..+++++.|++.||+ |||++++++.++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~-~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMV-PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 4555555555555543333444 566889999999999999999999999999999999997 99999999999999998
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFY 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (596)
+++..+... .+++.+++.|++.|+|.|...+..++++.+..|+++ |++..++.+
T Consensus 83 ~l~~~~~~~--------------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 136 (410)
T TIGR00885 83 FLFWPAAEI--------------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQ 136 (410)
T ss_pred HHHHHHHhh--------------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHH
Confidence 776554221 237888999999999999999999999999998888 888899999
Q ss_pred HHHhHHHHHHhhhhhhhcc--------------------------cccchHHHHHHHHHHHHHH
Q 007612 203 LALNLGSLFSNTILGYFED--------------------------EGMWALGFWVSTGSAFAAL 240 (596)
Q Consensus 203 ~~~~lg~~~~~~i~g~l~~--------------------------~~~~~~~f~~~~~~~~~~~ 240 (596)
...++|..++|.+++.+.. ..+|+++|++.++..++..
T Consensus 137 ~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 137 SFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887642 1369999987766544443
No 87
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.82 E-value=1.1e-18 Score=183.09 Aligned_cols=327 Identities=12% Similarity=0.112 Sum_probs=203.7
Q ss_pred HHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 007612 61 GVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCG 140 (596)
Q Consensus 61 ~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (596)
.+.+ +.+.+++|++..+.+++.+.+.++..++.++.|+++||+ ||||++.++.++..++.+.. .+ +
T Consensus 20 ~~~l-p~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~---~-------- 85 (355)
T TIGR00896 20 GPLL-PQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA---P-------- 85 (355)
T ss_pred cccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh---c--------
Confidence 3444 456779999999999999999999999999999999997 99999999988777776655 33 2
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhc
Q 007612 141 NELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFE 220 (596)
Q Consensus 141 ~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~ 220 (596)
+...+++.|++.|++.+...+.....+.|.+| ++ |++++++++...++|..+++.+++.+.
T Consensus 86 ------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~~~l~ 146 (355)
T TIGR00896 86 ------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAATVPLA 146 (355)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 26778899999999999888888888888886 46 899999999999999999999988887
Q ss_pred ccc--cchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCC
Q 007612 221 DEG--MWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGN 298 (596)
Q Consensus 221 ~~~--~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~ 298 (596)
+.. +|++.|.+.++..++.... +. ++.+++++++++ .
T Consensus 147 ~~~~~~w~~~f~~~~~~~~~~~~~-~~--~~~~~~~~~~~~-----------------------~--------------- 185 (355)
T TIGR00896 147 QHSGGHWQQALAWWALPALLALLA-WI--PQVRRRVAANQT-----------------------T--------------- 185 (355)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHH-Hh--hhhccccCCCCC-----------------------C---------------
Confidence 654 3888887665443332221 11 111110000000 0
Q ss_pred CccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhccccceeEeeecccc
Q 007612 299 RNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFTQMASLFVEQGAAMK 378 (596)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (596)
. ...+++ ..++++.+...+...+....+.....+.+.++.. .+.+
T Consensus 186 ~----------------------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~g~~ 230 (355)
T TIGR00896 186 T----------------------------RLTPVR-----IWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS--HGAS 230 (355)
T ss_pred C----------------------------CCCCch-----hhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCC
Confidence 0 000000 0011111111111122222233322223222211 1111
Q ss_pred ccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 007612 379 TTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKT 458 (596)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~ 458 (596)
.. ..+.......++.++..++.+++ .||.+ + +++.+.++..+.+++.+......
T Consensus 231 ~~------~~g~~~~~~~~~~i~~~~~~g~l----~dr~~-~------~~~~~~~~~~~~~~~~~~~~~~~--------- 284 (355)
T TIGR00896 231 AA------TAGSLLALMQLAQAASALLIPAL----ARRVK-D------QRGIVAVLAVLQLVGLCGLLFAP--------- 284 (355)
T ss_pred HH------HHHHHHHHHHHHHHHHHHhHHHH----Hhhhc-c------chHHHHHHHHHHHHHHHHHHHhh---------
Confidence 11 12233333445555666666654 34442 1 22345566666666665554421
Q ss_pred cCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 007612 459 ECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAP-DGLKSFGSALCMTSISLGNYVSSLLLTMVMKIS 534 (596)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P-~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~ 534 (596)
.+..+ ...++.|++.+...+...+.+.+..+ ++.++..+++.+....+++.++|.+.+.+.+.+
T Consensus 285 ----------~~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 285 ----------MHGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred ----------hhHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 01111 13467788988888887777765554 577899999999999999999999999887644
No 88
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.82 E-value=3.4e-18 Score=180.63 Aligned_cols=154 Identities=18% Similarity=0.118 Sum_probs=113.4
Q ss_pred HHHHHHHhhC--CChHHHHHHHHHH-----HHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccC
Q 007612 64 LVLFLTRVLQ--QNNAEAANNVSKW-----TGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRP 136 (596)
Q Consensus 64 l~~yl~~~lg--~~~~~~~~~~~~~-----~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (596)
...++.++.. .++++.+...+.. .+...+++++.|+++||+ ||||+++++.++..++.++++++.+.+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~-- 91 (394)
T TIGR00883 15 AAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI-- 91 (394)
T ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh--
Confidence 4445555443 4445555544432 223346789999999997 99999999999999998888877221110
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhh
Q 007612 137 RGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTIL 216 (596)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~ 216 (596)
.......++++|+++|++.+...+...+++.|.+|+++ |++..++.+.+..+|..+++.++
T Consensus 92 -------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 92 -------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred -------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHH
Confidence 00112468889999999999999999999999999988 99999999999999999998876
Q ss_pred hhhc--------ccccchHHHHHHHHHHHHH
Q 007612 217 GYFE--------DEGMWALGFWVSTGSAFAA 239 (596)
Q Consensus 217 g~l~--------~~~~~~~~f~~~~~~~~~~ 239 (596)
+.+. +..+|++.|++..+..++.
T Consensus 153 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 183 (394)
T TIGR00883 153 LLLSYLLGDDALLEWGWRIPFLVSAVLVLIG 183 (394)
T ss_pred HHHHHhcCHHHhhccchHHHHHHHHHHHHHH
Confidence 6543 3568999998766554443
No 89
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.81 E-value=1.1e-17 Score=175.64 Aligned_cols=153 Identities=13% Similarity=0.143 Sum_probs=117.0
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhc----cCchHHH-HHHHHHHHHHHHHHHhhhccccccCCC
Q 007612 64 LVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSY----WGRFKTC-AIFQGIFVIGLVLLSLSSYLFLIRPRG 138 (596)
Q Consensus 64 l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~----~Gr~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (596)
..+.+.++.|+|.++.++.... .+...+ .++.|.++||+ +||||.+ +.+.++.++....+++...
T Consensus 10 ~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~-------- 79 (356)
T TIGR00901 10 TLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP-------- 79 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc--------
Confidence 3344456789999999998655 343444 88999999996 3898874 5666666666666655411
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhh
Q 007612 139 CGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGY 218 (596)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~ 218 (596)
..+.+.+.+..++.+++.+...++..+++.|++|+++ |+++.++...+.++|.++++.++++
T Consensus 80 ------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~~~ 141 (356)
T TIGR00901 80 ------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLALV 141 (356)
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1235556666677788888888999999999999988 9999999999999999999999998
Q ss_pred hccccc--------chHHHHHHHHHHHHHHHHHH
Q 007612 219 FEDEGM--------WALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 219 l~~~~~--------~~~~f~~~~~~~~~~~~~~~ 244 (596)
+.+..+ ||..|++.++..++..+..+
T Consensus 142 l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 142 LASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 888777 99999988876665554433
No 90
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.81 E-value=5.8e-17 Score=174.21 Aligned_cols=446 Identities=10% Similarity=0.013 Sum_probs=255.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhh----hccCchHHHHHH-H
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSD----SYWGRFKTCAIF-Q 115 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laD----r~~Gr~~~l~~~-~ 115 (596)
++++.++...++..+.+-...++++.|+ +++|.+....+.+..+..+...+.+|+.|+++| |+ ||||.++++ .
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~ 81 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGA 81 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHH
Confidence 4566777777788888777778888876 589999999999999999999999999999999 46 999998775 5
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 116 GIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
+..+++.++++++.+...+. -|+.. +..........+++..+..++....++...++++|.+|+++++ ++
T Consensus 82 ~~~~~~l~ll~~~~~~~~~~-----~~~~~-~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~ 151 (477)
T TIGR01301 82 ALVAFAVILIGFAADIGHLF-----GDNLD-KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TR 151 (477)
T ss_pred HHHHHHHHHHHhCchhhhhc-----ccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HH
Confidence 56666666666652211000 00000 0000111133444444556677888888999999999988721 35
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhh--ccc-------------ccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChh
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYF--EDE-------------GMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPL 260 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l--~~~-------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (596)
.+.++.+...++|.++|+.++++. .+. .+.+..|++.++..++..++..+..+|.+..++++..
T Consensus 152 ~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~- 230 (477)
T TIGR01301 152 IANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFI- 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccch-
Confidence 789999999999999999888764 111 1578889988877777766666555543221110000
Q ss_pred HHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccch
Q 007612 261 ARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQV 340 (596)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (596)
++.++.+ + ..+.. ..++.+. +.+
T Consensus 231 ----------------------~~~~~~~-~-----------~~~~~----------------------~~~~~i~-~~~ 253 (477)
T TIGR01301 231 ----------------------NSEAAPP-S-----------KHGEE----------------------AFFGELF-GAF 253 (477)
T ss_pred ----------------------hhhcccc-c-----------ccchh----------------------hhHHHHH-HHH
Confidence 0000000 0 00000 0000000 000
Q ss_pred h-hhhhhhhhHHHHHHhHhHhhhhccccceeEeee-ccccccccccccCCc-cccccchhhHHHHHHhhhhhhhcccccc
Q 007612 341 E-EVKCILRLLPIWLCTILYSVVFTQMASLFVEQG-AAMKTTVSNFRIPPA-SMSSFDILSVAAFIFLYRRVIEPLAGGI 417 (596)
Q Consensus 341 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~r~ 417 (596)
+ .-|...+.+...++...-+..+..+.+.++-+. .+-+.+- +-....+ -+.........+...+.+.++.++.+|.
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~-~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~ 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQ-GAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 112233333333333333334444444333211 1101000 0000000 0011111111122223333444555555
Q ss_pred cccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCC-CCCceeehhHHHHHHHHHHHHHHhhhhhHHHHH
Q 007612 418 RKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHC-EGASSLSIFWQVPQYALIGASEVFMYVAQLEFF 496 (596)
Q Consensus 418 ~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 496 (596)
+ + ++....++.++.++++....++....-+..+.++.+. -.++....+..+..+.+.|+..+..+..-++++
T Consensus 333 g-~------~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~ 405 (477)
T TIGR01301 333 G-A------GKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALA 405 (477)
T ss_pred c-c------chhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHH
Confidence 4 1 1234477878888888777654310000000000000 001111146677788999999999999999999
Q ss_pred HhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhc
Q 007612 497 NAQAPD--GLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACA 574 (596)
Q Consensus 497 ~~~~P~--~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~ 574 (596)
++..|+ +..|..+|+.|++.-+...+..+..+.+.+..++ +...++.+.++.++++.++.++..
T Consensus 406 s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~--------------~~~~~~~~~gv~~~~aa~~~~~~~ 471 (477)
T TIGR01301 406 SIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG--------------GNLPAFVVGAVAAFVSGLLALILL 471 (477)
T ss_pred HHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC--------------CCeeHHHHHHHHHHHHHHHHHHhC
Confidence 999995 4559999999999999999998888875543322 123467888888888888888888
Q ss_pred cccc
Q 007612 575 KWYK 578 (596)
Q Consensus 575 ~~~~ 578 (596)
|+.+
T Consensus 472 ~~~~ 475 (477)
T TIGR01301 472 PRPR 475 (477)
T ss_pred CCCC
Confidence 7754
No 91
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.80 E-value=2.8e-17 Score=179.10 Aligned_cols=388 Identities=13% Similarity=0.045 Sum_probs=216.1
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 007612 63 NLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNE 142 (596)
Q Consensus 63 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (596)
....++..++|-+ ....|+.+...++..+..++.|+++|.+ |||..++++.++..+|.++++-+
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA-------------- 128 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATA-------------- 128 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcC--------------
Confidence 4456788888876 4457899999999999999999999997 99999999999999999999877
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc
Q 007612 143 LTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE 222 (596)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~ 222 (596)
++...++.+..+.|+|.|... .....++|..|.+. |..+..+......+....+|.++..+..+
T Consensus 129 ---------~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~ 192 (599)
T PF06609_consen 129 ---------QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAH 192 (599)
T ss_pred ---------CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccC
Confidence 347789999999999976654 55666899999888 87777766665555566777777777667
Q ss_pred ccchHHHHHHHHHHHHHHHH-HHhcCcceecc-CCCCCh----h--HHHHHHHHHHHHhhccccCCCc-cc-chhcccCC
Q 007612 223 GMWALGFWVSTGSAFAALVL-FLAGTTRYRHF-KPSGNP----L--ARFCQVIVAATKKWRVHLSAEG-ED-LYVIDAND 292 (596)
Q Consensus 223 ~~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~----~--~~~~~~~~~~~~~~~~~~p~~~-~~-l~~~~~~~ 292 (596)
.+|||.|++..+...++++. +++.++..+.+ +.++.+ . .|....+.....---...|-+- .. -+.|.
T Consensus 193 ~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~--- 269 (599)
T PF06609_consen 193 SGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWK--- 269 (599)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCC---
Confidence 89999999988765555433 33333322211 111111 1 1222222221111111111110 00 01111
Q ss_pred CCCCCCCccccccccchhhh--hhhhccccccccccCCCCCCcccCccchhhhhhhhhhH-HHHHHhHhHhhhhccccce
Q 007612 293 SSTNGNRNMLHTHGFKFLDR--AAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLL-PIWLCTILYSVVFTQMASL 369 (596)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 369 (596)
..+...-+-. ..++...-+ |.....+.|.- +...+++.|.+...+ ..+.....|+.....++
T Consensus 270 ----------Sa~VIa~lviG~~~Lv~F~~w-E~~~~~~~Pl~--P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p-- 334 (599)
T PF06609_consen 270 ----------SAHVIAPLVIGFVLLVAFVVW-EWFGAPKDPLF--PHRLFKDRRGFAALLVISFISGMNFFSVNILWP-- 334 (599)
T ss_pred ----------CccchhhHHHHHHHHHHHHHh-hhhccCCCCcC--CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 1111100000 001100000 11111123321 111122223322221 12222222322222222
Q ss_pred eEeeeccc-cccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 007612 370 FVEQGAAM-KTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIV 448 (596)
Q Consensus 370 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~ 448 (596)
++..++ +....+. ...........++..+.+.+.+.+..+. || .+..++++.+++.+.+..++..
T Consensus 335 --~~~~~vf~~d~~~~-~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~----------~Kw~li~~~~~~ta~~Gama~~ 400 (599)
T PF06609_consen 335 --QQVVNVFGSDPISI-TEIGWISSPVGFGSCAGAVILGLLFSKI-RH----------IKWQLIFGSVLMTAFCGAMAAV 400 (599)
T ss_pred --HHHhhhccCCCccc-ceeehhhhhHHHHHHHHHHHHHHHHHHc-cc----------hhHHHHHHHHHHHHHHHHHHHc
Confidence 211111 1100000 0122334444555555555555443322 22 2344667777766665555543
Q ss_pred HhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 449 ECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLT 528 (596)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~ 528 (596)
..+ +....+...++.+++.+...........-..|++..|+++|+..+.+.+|+.+|..+..
T Consensus 401 ~~~------------------n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 401 RPD------------------NKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred cCC------------------CcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 211 22222344567777877777777777888899999999999999999999999999887
Q ss_pred HHHh
Q 007612 529 MVMK 532 (596)
Q Consensus 529 ~i~~ 532 (596)
.+..
T Consensus 463 ~I~~ 466 (599)
T PF06609_consen 463 AIFT 466 (599)
T ss_pred HHHH
Confidence 6553
No 92
>PRK09848 glucuronide transporter; Provisional
Probab=99.80 E-value=2.4e-16 Score=170.89 Aligned_cols=360 Identities=13% Similarity=0.072 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhc---cCchHHH-HHHHHHHHHH
Q 007612 46 ILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSY---WGRFKTC-AIFQGIFVIG 121 (596)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~~l-~~~~~~~~~~ 121 (596)
-....+..+..+..+.++++.|+++.+|+++.++|.+.+...+...+..++.|+++||. +||||.. +++.+...+.
T Consensus 13 yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 13 YSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred hccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 33455666777777778889999999999999999999999999999999999999994 2666654 5555544444
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.+++... |. ...........++...+.+++.+...+...++..++.++.++ |.+..++.
T Consensus 93 ~~~~~~~---~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-----r~~~~~~r 151 (448)
T PRK09848 93 SVLVFWV---PT-------------DWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS-----RARLGAAR 151 (448)
T ss_pred HHHHHhC---cC-------------CCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----HHHHHHHH
Confidence 4443222 10 000112233444455667788888888888887777655332 77776665
Q ss_pred HHH-----HhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhcc
Q 007612 202 YLA-----LNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRV 276 (596)
Q Consensus 202 ~~~-----~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (596)
.++ .+++..++|.+.+.........+..+.. +..+++.++.+......++..+++.+..
T Consensus 152 ~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~e~~~~~~~~~--------------- 215 (448)
T PRK09848 152 GIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTI-VLAIAGMVLYFICFKSTRENVVRIVAQP--------------- 215 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH-HHHHHHHHHHHHHHcCcEeccCCCccCC---------------
Confidence 433 3456666676655432211111111111 1111222222111111111000000000
Q ss_pred ccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHH-HHHH
Q 007612 277 HLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLP-IWLC 355 (596)
Q Consensus 277 ~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 355 (596)
...+. + +.+.+.|.+..... .++.
T Consensus 216 -------------------------------~~~~~-------------------~-----~~l~~n~~f~~~~~~~~~~ 240 (448)
T PRK09848 216 -------------------------------SLKIS-------------------L-----QTLKRNRPLFMLCIGALCV 240 (448)
T ss_pred -------------------------------CHHHH-------------------H-----HHHhCCchHHHHHHHHHHH
Confidence 00000 0 00011122222211 1122
Q ss_pred hHhHhhhhccccceeEeeeccccccccccccCCccccccc-hhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHH
Q 007612 356 TILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFD-ILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIG 434 (596)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig 434 (596)
...+.. +....+++.....+.+.. ...+...+ .+..++..++.++ +.+|.+ .++.+.+|
T Consensus 241 ~~~~~~-~~~~~~~~~~~~~g~~~~-------~~~~~~~~~~~~~~~~~~l~~~----l~~r~g--------~~~~~~~g 300 (448)
T PRK09848 241 LISTFA-VSASSLFYVRYVLNDTGL-------FTVLVLVQNLVGTVASAPLVPG----MVARIG--------KKNTFLIG 300 (448)
T ss_pred HHHHHH-HhhhheeeEeeecCChHH-------HHHHHHHHHHHHHHHHHHHHHH----HHHHhC--------cHHHHHHH
Confidence 222222 222223333322221111 01111111 2223334444443 344443 44567778
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCch-------hHHH
Q 007612 435 LVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDG-------LKSF 507 (596)
Q Consensus 435 ~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~-------~rg~ 507 (596)
.++.+++.+.+.+.. ..+.+.+++.+++.++|++...+..+++..+..|.+ .+|.
T Consensus 301 ~~~~~i~~~~~~~~~------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~ 362 (448)
T PRK09848 301 ALLGTCGYLLFFWVS------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGL 362 (448)
T ss_pred HHHHHHHHHHHHHcC------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhH
Confidence 887777766655421 124455566678889999999999999999988754 4699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007612 508 GSALCMTSISLGNYVSSLLLTMVMKIST 535 (596)
Q Consensus 508 ~~gl~~~~~~lg~~lg~~l~~~i~~~~~ 535 (596)
.+|+.++.+.+|..+|+.+.+.+.+..+
T Consensus 363 ~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 363 TYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999998876553
No 93
>PRK09669 putative symporter YagG; Provisional
Probab=99.78 E-value=1.9e-16 Score=171.45 Aligned_cols=170 Identities=14% Similarity=0.062 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhh----ccCch-HHHHHHHHHHHHHH
Q 007612 48 LNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDS----YWGRF-KTCAIFQGIFVIGL 122 (596)
Q Consensus 48 ~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr----~~Gr~-~~l~~~~~~~~~~~ 122 (596)
+..+..+..+..+..+++.|+++.+|+++..++.+.++..+...+..|+.|+++|| + ||| +.++.+.+..+++.
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~~~i~~ 94 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIPFGVVC 94 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHHHHHHH
Confidence 44455666666777889999999999999999999999999999999999999999 5 764 55556766666666
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCc-cccccccchhhHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDE-EDAKEGHSKVAFFSYF 201 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~ 201 (596)
+++... |+. ........+++...+.+.+..+......++.+|+.++ ++ |.+..++.
T Consensus 95 ~l~f~~---p~~--------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e------R~~l~~~r 151 (444)
T PRK09669 95 LLTFYT---PDF--------------GATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE------RHSLQSWR 151 (444)
T ss_pred HHHHhC---CCC--------------CcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH------HHHHHHHH
Confidence 555443 220 0112345555555566666667777788999998854 44 88888888
Q ss_pred HHHHhHHHHHHhhhhhhhcc-------cccchHHHHHHHHHHHHHHH
Q 007612 202 YLALNLGSLFSNTILGYFED-------EGMWALGFWVSTGSAFAALV 241 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l~~-------~~~~~~~f~~~~~~~~~~~~ 241 (596)
....++|+.+++.+...+.. ..+|+..+.+.+++.++..+
T Consensus 152 ~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~ 198 (444)
T PRK09669 152 FALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFF 198 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 88888888777654433322 24677666666555444433
No 94
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=2.7e-17 Score=181.77 Aligned_cols=387 Identities=14% Similarity=0.051 Sum_probs=229.0
Q ss_pred HhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCC
Q 007612 70 RVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTH 149 (596)
Q Consensus 70 ~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (596)
+..+.+.....+..+++.++..+++++.|.++||+ |||+++++++++.+++.++.+++ +
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a---~----------------- 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA---P----------------- 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh---C-----------------
Confidence 45667788889999999999999999999999995 99999999999999999999888 3
Q ss_pred CchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHH
Q 007612 150 SSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGF 229 (596)
Q Consensus 150 ~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f 229 (596)
++..+++.|++.|++.++...+...+++|+++++. |+.+.++ ......++.+++.+++++.. +||+.+
T Consensus 170 ---~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~ 237 (521)
T KOG0255|consen 170 ---NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLF 237 (521)
T ss_pred ---cHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHH
Confidence 38999999999999999999999999999999999 9999999 77778888888888888877 799999
Q ss_pred HHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCCCCcccccc----
Q 007612 230 WVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTH---- 305 (596)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~---- 305 (596)
++..+..++.++. ++. .||+|+|+...++.+++.+..+++...+
T Consensus 238 ~~~~~~~~~~~~~-~~l-------------------------------~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~ 285 (521)
T KOG0255|consen 238 WIISIPSGLFLLL-WFL-------------------------------PPESPRWLLSKGRIDEAIKILKKIAKLNGRKL 285 (521)
T ss_pred HHHHHHHHHHHHH-HHc-------------------------------cCcChHHHHHcCchHHHHHHHHHHHhhcCCCC
Confidence 9877665555444 222 3355555555544444333333321110
Q ss_pred -ccchhhhhhhhccccccccccCCC-CCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhccccceeEeeeccccccccc
Q 007612 306 -GFKFLDRAAYISSRDLDEQKQGCS-NPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSN 383 (596)
Q Consensus 306 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (596)
.....+.......+ .....++ ..+....... +.++.++.....+ ..+...+... ..+..+
T Consensus 286 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~-~l~~~~~~~~~~~---~~~~~~y~gl-----------~~~~~~ 347 (521)
T KOG0255|consen 286 SVKELLRLELLLRPL---KLLFTEPKISFLDLFRTP-RLRYRTLYLLFIW---FVFSLVYYGL-----------SLNVSG 347 (521)
T ss_pred CcHHHHHHHHHhhHh---hhhccCCCCchhhhhcCH-HHHHHHHHHHHHH---HHHhHHHHhh-----------hhhhhh
Confidence 00000000000000 0000000 1111000000 0111111111111 1111111110 101000
Q ss_pred cccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCC
Q 007612 384 FRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHC 463 (596)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~ 463 (596)
.+............ .-....... ....++.+ ++.....+.++..+++++.++....
T Consensus 348 lg~~~~~~~~~~~~-~~~p~~~~~---~~~~~~~g--------R~~~~~~~~~~~~~~~~~~~~~~~~------------ 403 (521)
T KOG0255|consen 348 LGGNIYLNFTLSGL-VELPAYFRN---GLLLPEFG--------RRPPLFLSLFLAGIGLLLFGWLPDD------------ 403 (521)
T ss_pred cCchHHHHHHHHHH-HHhhHHHHH---HHHHHHhC--------cHHHHHHHHHHHHHHHHHHHHhhcc------------
Confidence 01100000001111 111111111 11222322 4455788888888888887765321
Q ss_pred CCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 007612 464 EGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWV 543 (596)
Q Consensus 464 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~ 543 (596)
...+.......+..++....+...+.+..|..|+..|+.+.|.......+|+.+++.+...... +.
T Consensus 404 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~---------~~ 469 (521)
T KOG0255|consen 404 -----LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ---------MF 469 (521)
T ss_pred -----chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------hc
Confidence 1111222233334444445555558899999999999999999999999999999888754322 10
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccchhhh
Q 007612 544 PGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKCIELEAK 585 (596)
Q Consensus 544 ~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~~~~~~ 585 (596)
... .+..++..+.+..++..+..++++...+.+.
T Consensus 470 ------~~~--~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t 503 (521)
T KOG0255|consen 470 ------PLL--GLILFGWLALLLGLLSLLLLPETKGKPLPGT 503 (521)
T ss_pred ------ccc--hHHHHHHHHHHHHHHHHhcCcccCCCCCchh
Confidence 001 1222466777777777788889888766543
No 95
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=9.1e-18 Score=172.03 Aligned_cols=440 Identities=13% Similarity=0.059 Sum_probs=239.1
Q ss_pred CchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhh-------CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCch
Q 007612 39 GWVAGIIILLN---QGLATLAFFGVGVNLVLFLTRVL-------QQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRF 108 (596)
Q Consensus 39 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~yl~~~l-------g~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~ 108 (596)
.|+.+-.+.++ .+......+.+-...+.+-.-+. |+++...+.+..+..++.++++++.|+++||+ |||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK 114 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRK 114 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cch
Confidence 44444444444 44444444444443333322222 25667788899999999999999999999997 999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHhccccccchhhhhhccCCccc
Q 007612 109 KTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSS-LEICLFYLSIYFVALGNGGYQPNIATFGADQYDEED 187 (596)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 187 (596)
+++-..+++++++++.++++.. .+++ .-..++...|+++|+|.|+-.|...+..+|..-++.
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~-----------------~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~ 177 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVG-----------------TTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT 177 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCC-----------------CCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc
Confidence 9999999999999987766522 2223 346788899999999999999999999999988777
Q ss_pred cccccchhhHHH----HHHHHHhHHHHHHhhhhhhhccc-----------ccchHHHHHHHHHHHHHHHHHHhcCcceec
Q 007612 188 AKEGHSKVAFFS----YFYLALNLGSLFSNTILGYFEDE-----------GMWALGFWVSTGSAFAALVLFLAGTTRYRH 252 (596)
Q Consensus 188 ~~~~~~r~~~~~----~~~~~~~lg~~~~~~i~g~l~~~-----------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 252 (596)
|++..+ +..++.-.|++++-++.+.+... .-||..|.+.++..++.+ .+
T Consensus 178 ------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l---y~------- 241 (538)
T KOG0252|consen 178 ------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL---YF------- 241 (538)
T ss_pred ------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH---Hh-------
Confidence 665544 45555666666665555444322 127777666554432222 11
Q ss_pred cCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcc-cCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCC
Q 007612 253 FKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVID-ANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNP 331 (596)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (596)
+.+|||++++..-.+ +.+++.++.++.... .++... ..+ .....+..
T Consensus 242 ----------------------Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~----~~~~~~---~~~---~~~~~~~~ 289 (538)
T KOG0252|consen 242 ----------------------RLKMPETARYTALVSKKLKQAAGDMKKVLSV----DIEAES---TAE---SDVPPPSN 289 (538)
T ss_pred ----------------------hhcCCcchhHHHHhhcCHhhhhhcccccccc----ccchhh---ccc---cCCCCccc
Confidence 112555554431111 111111111111100 000000 000 00000111
Q ss_pred CcccCccchhhhhhhhhhHHHHHHhHhHhhhhccccceeEeeeccccccccccccCCc--ccccc--chhhHHHHH---H
Q 007612 332 WRLCPVTQVEEVKCILRLLPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPA--SMSSF--DILSVAAFI---F 404 (596)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~---~ 404 (596)
+..+ ......++ ....++.....|+....-.++.-..| +.-+...+..++ .+... ...+..+.+ -
T Consensus 290 ~~~~---F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~----s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~ 361 (538)
T KOG0252|consen 290 SFGL---FSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQ----SVIFSAIGVIPSANTYHELFKVAEGNLIIAVCST 361 (538)
T ss_pred ccch---HHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHH----HHHHHhhccCCCcchHHHHHHHHHHHHHHHHHcc
Confidence 1100 11111122 11223333444433332222211111 111111111111 11000 111111111 1
Q ss_pred h-hhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHH-HH
Q 007612 405 L-YRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYAL-IG 482 (596)
Q Consensus 405 l-~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~g 482 (596)
+ .-++..-+.++++ +...-+.|++++++.++.++..-++ ..+..-.++.+.+ .-
T Consensus 362 vPGyw~tv~~id~iG--------Rk~iq~~GF~~~~i~~~~~~~~y~~----------------~~~~~Gf~v~y~l~~f 417 (538)
T KOG0252|consen 362 VPGYWFTVYFIDIIG--------RKYIQLMGFFIMTIFFFVIAGPYNQ----------------LENTIGFVVLYSLTFF 417 (538)
T ss_pred CCceeEEEEEeehhh--------hHHHHHhhHHHHHHHHHHHcCCccc----------------ccccCceeehHHHHHH
Confidence 1 1122223455554 4456788999999988888763221 0111112223322 23
Q ss_pred HHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHH
Q 007612 483 ASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGL 562 (596)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i 562 (596)
++.-.-+.....+.+|.+|.+.||+.-|+....+-.|+.+|........+. .+ ....+..+.|+.+++.
T Consensus 418 f~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~-------~y----p~~~g~~~v~~i~~~~ 486 (538)
T KOG0252|consen 418 FGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH-------NY----PPNIGVRNVFIILAGC 486 (538)
T ss_pred HHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc-------cC----CccccchHHHHHHHHH
Confidence 333334455667888999999999999999999999999998887765431 11 1134557789999999
Q ss_pred HHHHHHHHHhhcccccccchhhhhhh
Q 007612 563 TTVDFVVYIACAKWYKCIELEAKCAE 588 (596)
Q Consensus 563 ~~i~~~~~~~~~~~~~~~~~~~~~~~ 588 (596)
+.++.++.+++- |+|++++|+.+.+
T Consensus 487 ~~~gi~~T~l~p-Etk~~~leei~~e 511 (538)
T KOG0252|consen 487 MLLGILFTLLIP-ETKGKSLEEISNE 511 (538)
T ss_pred HHHhHheeEEee-cccccCHHHhcCh
Confidence 988877766655 9999999876544
No 96
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.78 E-value=4.1e-16 Score=170.26 Aligned_cols=364 Identities=9% Similarity=0.010 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhh----hccCc-hHHHHHHHHHHHHH
Q 007612 47 LLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSD----SYWGR-FKTCAIFQGIFVIG 121 (596)
Q Consensus 47 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laD----r~~Gr-~~~l~~~~~~~~~~ 121 (596)
.+..+..++.+..+..+++.|+++.+|+++..+|.+..+..+...+..|+.|+++| |+ || |+.++++.+..+++
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVV 90 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHH
Confidence 35556667777778899999999999999999999999999999999999999999 65 87 55666677777776
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCC-ccccccccchhhHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYD-EEDAKEGHSKVAFFSY 200 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~ 200 (596)
.+++... |+. ........+++...+.+++..+......++..|+.+ +++ |.+..++
T Consensus 91 ~~llf~~---p~~--------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e------R~~l~~~ 147 (473)
T PRK10429 91 LFLLFSA---HLF--------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE------REQLVPY 147 (473)
T ss_pred HHHHHcC---CCC--------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH------HHHHHHH
Confidence 6655433 210 011223445555556677888888889999999985 555 8898888
Q ss_pred HHHHHhHHHHHHhhhhhhhcc-------cccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHh
Q 007612 201 FYLALNLGSLFSNTILGYFED-------EGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKK 273 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~-------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (596)
.....++|+.+.+.+...+.+ ..+|+....+.+++.++..++.+...++.. +++..++.
T Consensus 148 ~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~-~~~~~~~~------------- 213 (473)
T PRK10429 148 PRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY-SSDNQVSA------------- 213 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecC-Cccccccc-------------
Confidence 777777776666554443221 124555555444443333333333222211 00000000
Q ss_pred hccccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHH
Q 007612 274 WRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIW 353 (596)
Q Consensus 274 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (596)
+ .+..++.+.- +.+.+.|.++..+...
T Consensus 214 ------~-----------------------~~~~~~~~~~------------------------~~~~~n~~~~~ll~~~ 240 (473)
T PRK10429 214 ------E-----------------------GSHLTLKDIV------------------------ALIYKNDQLSCLLGMA 240 (473)
T ss_pred ------c-----------------------ccCCCHHHHH------------------------HHHhcCHHHHHHHHHH
Confidence 0 0000000000 0011113333322222
Q ss_pred HHhHhHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHH
Q 007612 354 LCTILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGI 433 (596)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~i 433 (596)
+...........+..++.....+ +.. ....+..+..+..++..++.+++ .+|++ +++.+.+
T Consensus 241 ~~~~~~~~~~~~~~~y~~~y~~~-~~~------~~~~~~~~~~i~~ii~~~~~~~l----~~r~g--------kk~~~~~ 301 (473)
T PRK10429 241 LAYNIASNIINGFAIYYFTYVIG-DAD------LFPYYLSYAGAANLVTLILFPRL----VKSLS--------RRILWAG 301 (473)
T ss_pred HHHHHHHHHHhhheeeEEEEECC-CHH------HHHHHHHHHHHHHHHHHHHHHHH----HHHcC--------cHHHHHH
Confidence 22222222222222333332211 111 01122223334445555555543 44544 3334555
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCC-------chhHH
Q 007612 434 GLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAP-------DGLKS 506 (596)
Q Consensus 434 g~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg 506 (596)
+..+.+++.+....... ..+.+.+.+++..++.+++.+...+..++++.|..+ ++..|
T Consensus 302 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G 366 (473)
T PRK10429 302 ASIFPVLSCGVLLLMGL---------------AAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCES 366 (473)
T ss_pred HHHHHHHHHHHHHHHhc---------------cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchh
Confidence 65555544443322100 001234455556677889999989888899999966 45567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007612 507 FGSALCMTSISLGNYVSSLLLTMVMKIST 535 (596)
Q Consensus 507 ~~~gl~~~~~~lg~~lg~~l~~~i~~~~~ 535 (596)
...|+..+...+|..+++.+.+.+.+..+
T Consensus 367 ~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 367 IAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 79999999999999999999998887653
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.78 E-value=1.8e-17 Score=185.96 Aligned_cols=205 Identities=17% Similarity=0.186 Sum_probs=151.8
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH
Q 007612 37 SGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG 116 (596)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~ 116 (596)
...++.+++.+....+......++.......+.++++++..+.|++.+.+.++..++.++.|+++||+ ||||.+.++.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~l 106 (633)
T TIGR00805 28 FSKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCA 106 (633)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHH
Confidence 34455555555545555555556666667778899999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHhhhcccc----------------ccCCCCCCCCC----------CCCCCC--chhHHHHHHHHHHHHHhc
Q 007612 117 IFVIGLVLLSLSSYLFL----------------IRPRGCGNELT----------PCGTHS--SLEICLFYLSIYFVALGN 168 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~----------~~~~~~--~~~~~~l~~~~~l~g~g~ 168 (596)
+++++.+++++...... ..+.-|.+..+ .|...+ ...+..++++|+++|+|.
T Consensus 107 l~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~ 186 (633)
T TIGR00805 107 IMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA 186 (633)
T ss_pred HHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC
Confidence 99999999887631000 00112210000 011111 113567889999999999
Q ss_pred cccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccc----------------------cch
Q 007612 169 GGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEG----------------------MWA 226 (596)
Q Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~----------------------~~~ 226 (596)
+...+...+++.|++|+++ |+..+++++....+|.++|+.+++++.+.+ +|+
T Consensus 187 ~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWw 260 (633)
T TIGR00805 187 TPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWW 260 (633)
T ss_pred CcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHH
Confidence 9999999999999999999 999999999999999999999999877532 266
Q ss_pred HHHHHHHHHHHHHHHHHHhcCc
Q 007612 227 LGFWVSTGSAFAALVLFLAGTT 248 (596)
Q Consensus 227 ~~f~~~~~~~~~~~~~~~~~~~ 248 (596)
..|++.+++.++..+.++..++
T Consensus 261 l~Fli~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFFFPK 282 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhCcc
Confidence 6777766655554444444443
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.78 E-value=3.1e-16 Score=166.24 Aligned_cols=380 Identities=13% Similarity=0.091 Sum_probs=217.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 007612 47 LLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLS 126 (596)
Q Consensus 47 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~ 126 (596)
....+.....+-...++++.|++ +.|+|..|.|.+.+...+...+++++.|.++||+..+||.+.+..++.++...+..
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~-~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLE-SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 33344444445556788899997 57899999999999999999999999999999974578888777776666555554
Q ss_pred hhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHh
Q 007612 127 LSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALN 206 (596)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 206 (596)
.. ++++.+++...+..+......|...++..+...++. .-++-..+.+.
T Consensus 87 ~~-----------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~--------~~YG~iRlwGS 135 (400)
T PF03825_consen 87 FS-----------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRG--------KDYGRIRLWGS 135 (400)
T ss_pred Hh-----------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccc--------CCCCcchhhhh
Confidence 44 225666666677777777778888888877765322 22333444455
Q ss_pred HHHHHHhhh-hhhhcccc---cchHHHHHHHHHHHHHHHHHHhcCccee-ccCCCCChhHHHHHHHHHHHHhhccccCCC
Q 007612 207 LGSLFSNTI-LGYFEDEG---MWALGFWVSTGSAFAALVLFLAGTTRYR-HFKPSGNPLARFCQVIVAATKKWRVHLSAE 281 (596)
Q Consensus 207 lg~~~~~~i-~g~l~~~~---~~~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 281 (596)
+|.+++... ++++.... +....+++.++..++.....+. .++.+ +++.+.+...
T Consensus 136 iGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~-lp~~~~~~~~~~~~~~-------------------- 194 (400)
T PF03825_consen 136 IGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALF-LPKTPPKRSAKESVKK-------------------- 194 (400)
T ss_pred HHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHh-CCCCccccccCCCccc--------------------
Confidence 555555332 22222222 2234455544333222222222 22211 0000000000
Q ss_pred cccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhH-HHHHHhHhHh
Q 007612 282 GEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLL-PIWLCTILYS 360 (596)
Q Consensus 282 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 360 (596)
.... +.+ +-+++ |+.+.++ ..+..+....
T Consensus 195 -------------------------~~~~-------------------~~~-----~llk~-~~~~~Fll~~~l~~~~~~ 224 (400)
T PF03825_consen 195 -------------------------LLGL-------------------DAL-----KLLKN-PRFLVFLLAAFLIGISHA 224 (400)
T ss_pred -------------------------ccch-------------------HHH-----HHhcC-ccHHHHHHHHHHHHHHHH
Confidence 0000 000 00111 2222222 2222222222
Q ss_pred hhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHH
Q 007612 361 VVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIV 440 (596)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v 440 (596)
..+. +.+.+..+..+.... .......+..+.-+......+ ++.+|++ ..+.+.++.+..++
T Consensus 225 ~~~~-f~~~yl~~~gg~~~~------~~g~~~~l~~~aEi~~f~~~~----~~~~r~g--------~~~ll~~a~~~~~v 285 (400)
T PF03825_consen 225 AYYT-FFSIYLQELGGYSGS------TIGILWALGVVAEIPFFFFSG----RFLKRFG--------IKWLLLLALVAYAV 285 (400)
T ss_pred HHHH-HHHHHHHHcccchhh------HHHHHHHHHHHHHHHHHHHHH----HHHHhcC--------HHHHHHHHHHHHHH
Confidence 2222 222222211100000 011111222222223333333 4455554 77889999999999
Q ss_pred HHHHHHHHHhhhhhhhcccCCCCCCCceeehhH----HHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHH-
Q 007612 441 AMLAAGIVECYRLKYAKTECKHCEGASSLSIFW----QVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTS- 515 (596)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~- 515 (596)
-..+++... .+.++ ......++|+..+....+...|+.+.+|++.|++++|+++..
T Consensus 286 R~~l~a~~~-------------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~ 346 (400)
T PF03825_consen 286 RWLLYAYFS-------------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALS 346 (400)
T ss_pred HHHHHHHhc-------------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHH
Confidence 998888742 12222 222346799999999999999999999999999999998876
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccc
Q 007612 516 ISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWY 577 (596)
Q Consensus 516 ~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~ 577 (596)
..+|+.+|..+.|.+.+..+.++ ...+..+|.+.+++.++..+++++..|++
T Consensus 347 ~Glg~~iG~~igG~l~~~~g~~~----------~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 347 FGLGGAIGSLIGGWLYDAFGARG----------MFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhcchh----------hhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 67999999999999887543322 12244567777777777777777776654
No 99
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.78 E-value=3.2e-17 Score=164.39 Aligned_cols=117 Identities=22% Similarity=0.189 Sum_probs=104.8
Q ss_pred CChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchh
Q 007612 74 QNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLE 153 (596)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (596)
.+..-+|.+.+.+.+..++.++..|.++||+ |||+++++|.+..++...+.+.+ .+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S-----------------------~~ 120 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS-----------------------RN 120 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH-----------------------HH
Confidence 3456679999999999999999999999998 99999999999888887777776 34
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcc
Q 007612 154 ICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFED 221 (596)
Q Consensus 154 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~ 221 (596)
+..+.++|++.|+..|-. ..+.++++|.+++++ |+.+++..+.+..+|.++||.|+|++.+
T Consensus 121 F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 121 FAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 766777799999998875 778899999999998 9999999999999999999999999987
No 100
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.77 E-value=4e-16 Score=165.90 Aligned_cols=177 Identities=11% Similarity=-0.092 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHH--HHHHHHHHHHHhhhH-HHHhhhccCchHHHHHHHHHH-
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANN--VSKWTGTVYIFSLVG-AFLSDSYWGRFKTCAIFQGIF- 118 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~--~~~~~~~~~i~~~~~-G~laDr~~Gr~~~l~~~~~~~- 118 (596)
...++..++.+.+.+..+.+.+|.|++ +.|.|..+.|.. .+...+...+..|+. ++.+||+ ||||..++...+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 566777888899998888899999986 569999999997 456677777777777 5579996 9999876665332
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.+....+.+.. +. ......++....+.++..+...+...++..|..++++ ++...
T Consensus 81 ~~~~~~~~~~~--~~-----------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~ 135 (390)
T TIGR02718 81 SACLASLALVG--PD-----------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGN 135 (390)
T ss_pred HHHHHHHHcCC--cc-----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHH
Confidence 22222222110 11 0112233344444556666666666777777776666 77777
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhc
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAG 246 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 246 (596)
+....+..+|..+|+.+.+++.+..||+..|++.++..++..+..+..
T Consensus 136 ~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 136 AVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 888888899999999888899999999999998887665555444443
No 101
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.75 E-value=1.9e-16 Score=165.49 Aligned_cols=391 Identities=14% Similarity=0.086 Sum_probs=222.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+..|......+....+.-...++.+.+++++.|+|..+.|.+.++..+...+.+|+.|.++||. |.||-++....+..+
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence 3556566666666666667789999999999999999999999999999999999999999997 877765544332222
Q ss_pred --HHHHH-HhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh-
Q 007612 121 --GLVLL-SLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA- 196 (596)
Q Consensus 121 --~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~- 196 (596)
+.+.. .+. |.+. .| .+++..+.++..+....+..+.. |.+-++.. |..
T Consensus 86 l~~pff~~v~~---pll~----------------~n---~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~s-----r~~~ 137 (412)
T PF01306_consen 86 LFGPFFIYVFG---PLLQ----------------SN---FWLGAIIGGIYLGLVFNAGVPLS-EAYAERVS-----RRNG 137 (412)
T ss_dssp TCHHHHHHTHH---HHHH----------------TT----HHHHHHTTTTTTTTTTTHHHHH-HHHHHHHH-----HHHS
T ss_pred HHHHHHHHHHH---HHHH----------------HH---HHHHHHHHHHHHHHHHcccchHH-HHHHHHHH-----HHhc
Confidence 22221 121 2100 01 22233333333333333332222 22222111 222
Q ss_pred -HHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhc
Q 007612 197 -FFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWR 275 (596)
Q Consensus 197 -~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (596)
=+|-..+.+.+|.+++..++|.+.+ .+-+..||+..+..++..++.+..++..+++.+..+.
T Consensus 138 feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~---------------- 200 (412)
T PF01306_consen 138 FEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADA---------------- 200 (412)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTT----------------
T ss_pred CCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcc----------------
Confidence 2334566788999999999998876 4567788877655444444433333221111000000
Q ss_pred cccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHH-HHH
Q 007612 276 VHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLP-IWL 354 (596)
Q Consensus 276 ~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 354 (596)
.+.++++.+.....++.+.|+.+.+.. +..
T Consensus 201 -------------------------------------------------~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g 231 (412)
T PF01306_consen 201 -------------------------------------------------LGAKKDKVSLKDVLSLFKMRNFWFFVLFVIG 231 (412)
T ss_dssp -------------------------------------------------SSS------HHHHHHHTTSHHHHHHHHHHHH
T ss_pred -------------------------------------------------cccCCCCCcHHHHHHHhcchhHHHHHHHHHH
Confidence 000000000000001112233333332 223
Q ss_pred HhHhHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHH
Q 007612 355 CTILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIG 434 (596)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig 434 (596)
....|.+...|++.++..... +...+ +...+..+++..+.-.+...+.. ++.+|++ .++.++++
T Consensus 232 ~~~~Y~vfdqqf~~y~~~~f~--~~~~g--~~~~G~l~s~~v~~E~~~m~~~p----~li~rig--------~k~~Llla 295 (412)
T PF01306_consen 232 VAAIYDVFDQQFPIYFASFFQ--SAGQG--NQMYGYLWSVQVFLEALMMFFSP----WLINRIG--------AKNLLLLA 295 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHTSS--SHHHH--HHHHHHHHHHHHHHHHHHHHHHH----HHHHHH---------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc--ccccC--hhHHhHHHHHHHHHHHHHHHHHH----HHHHhcC--------hHhHHHHH
Confidence 334555555554433322111 11000 00012222222333333333333 4456665 77778899
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHH-H
Q 007612 435 LVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALC-M 513 (596)
Q Consensus 435 ~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~-~ 513 (596)
..++++-.+..++. .+++++.+.-.++++-..+...+..-|+.+.+|++..++...+. +
T Consensus 296 g~i~~iRi~~~~~~--------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~ 355 (412)
T PF01306_consen 296 GVIMAIRIIGSGFA--------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQ 355 (412)
T ss_dssp HHHHHHHHHHHHT----------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhh--------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHH
Confidence 99999998888764 36778888889999999999999999999999999999999985 6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhccccc
Q 007612 514 TSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYK 578 (596)
Q Consensus 514 ~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~ 578 (596)
+..++|..+.+.+.|.+.+ .-+++..|++++.+.++..++.++..++.+
T Consensus 356 ~~~~~~~~i~s~~~G~lyd----------------~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 356 FAKQIGIIILSPLAGYLYD----------------RIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp TTHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHHHhhhHHhhHh----------------hcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 7789999999999998776 345677899999998888877777665543
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.75 E-value=2.3e-15 Score=163.74 Aligned_cols=380 Identities=14% Similarity=0.080 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccC-----chHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWG-----RFKTCAIFQG 116 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G-----r~~~l~~~~~ 116 (596)
.+.++...++.+.+. +.+...++.++++++|+|+++.+...+...+...+-.+ .|.++||+ + ||+.++++.+
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHH
Confidence 445566678888888 77888888999999999999999998888888877555 99999997 7 6666777765
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
+.. ......++.. + +......+.+++.+++.+....+.-++..|..+ ++.+ .++.
T Consensus 104 l~~-~~~~~~l~~~-~-------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~~~ 158 (468)
T TIGR00788 104 LGS-AILYGLLPGK-V-------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS---AGPS 158 (468)
T ss_pred HHH-HHHHHhcccc-c-------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cCCC
Confidence 542 1222222200 1 123334446778899999999999999999998 4411 1344
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhcc
Q 007612 197 FFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRV 276 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (596)
..++.+...++|..+|+.++|.+.+..+|+..|++.++..++..+...+.+++.....|+....... .+.
T Consensus 159 ~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~-----~~~----- 228 (468)
T TIGR00788 159 LVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEM-----NMA----- 228 (468)
T ss_pred eeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchh-----hhh-----
Confidence 5566666678999999999999999899999999887666655433333322110011110000000 000
Q ss_pred ccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHh
Q 007612 277 HLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCT 356 (596)
Q Consensus 277 ~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (596)
.. . ....+... ...+ .-| .....+.+...+.+.+..
T Consensus 229 -----------------------~~--~--~~~~~~~~-~~~~----------~l~------~~l~~~~i~~~l~fifl~ 264 (468)
T TIGR00788 229 -----------------------LL--T--LGVLANVK-VQIL----------GLR------GAIQLLEIAKPLIFIFLS 264 (468)
T ss_pred -----------------------hh--h--hhHHHHHH-HHHH----------HHH------HHHhcHHHHHHHHHHHHH
Confidence 00 0 00000000 0000 000 000112222211111110
Q ss_pred HhHhhhhccccceeEeeeccccccccccccCCccc---cccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHH
Q 007612 357 ILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASM---SSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGI 433 (596)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~i 433 (596)
+..........+..+.. . + +.++... .....++.++...+.+ ++.+|++ .++.+.+
T Consensus 265 --~~~~~~~~~~~f~~~~~--~--l---G~s~~~~G~~~~~~~v~~i~g~~~~~----~~~~~~~--------~r~~l~~ 323 (468)
T TIGR00788 265 --YANLPGASGSVFCATTQ--C--L---PGGPSFSGMSKVVGNLGSLCGVGGYD----RFLKTFP--------YRLLFGV 323 (468)
T ss_pred --HhhcCCCCceeEEEEcc--c--C---CCCcchhhhHHHHHHHHHHHHHHHHH----HHHhhCC--------HHHHHHH
Confidence 22222222122222111 1 1 2222222 2223333444444444 3344443 6667777
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHH
Q 007612 434 GLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCM 513 (596)
Q Consensus 434 g~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~ 513 (596)
+.++.+++.......... .+. . ....+.+++....++.+++.++...+...++.+..|++.+|+..|+.+
T Consensus 324 ~~~l~~~~~~~~~~l~~~-~~~--------~-~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~ 393 (468)
T TIGR00788 324 TTLLYTLSSLFDLILVKR-WNL--------A-FGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLA 393 (468)
T ss_pred HHHHHHHHHhCceeeeec-ccc--------c-cCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHH
Confidence 777777766443211100 000 0 000122344445677888888889888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 007612 514 TSISLGNYVSSLLLTMVMKIS 534 (596)
Q Consensus 514 ~~~~lg~~lg~~l~~~i~~~~ 534 (596)
...++|..+++.+.+.+.+..
T Consensus 394 s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 394 SILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 999999999998888887654
No 103
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.74 E-value=2.7e-16 Score=169.41 Aligned_cols=397 Identities=12% Similarity=0.049 Sum_probs=239.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhh----hccCchHH-HHHHHHHHHHHHHH
Q 007612 50 QGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSD----SYWGRFKT-CAIFQGIFVIGLVL 124 (596)
Q Consensus 50 ~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laD----r~~Gr~~~-l~~~~~~~~~~~~~ 124 (596)
.+..+........++..|+++.+|+++..++.+..+..+...+..|+.|+++| |+ ||||. ++++.+...++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 35555555666678899999999999999999999999999999999999999 76 76665 55677777777666
Q ss_pred HHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHH
Q 007612 125 LSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLA 204 (596)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 204 (596)
+.... | .+.........+.+..++..++.........++..|..+++++ |.+..++....
T Consensus 89 lf~~~--p-------------~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~~~~~ 148 (428)
T PF13347_consen 89 LFSPP--P-------------AGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSWRMIF 148 (428)
T ss_pred hhccc--c-------------chhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHHHHHH
Confidence 66430 1 0111112234456666667888899999999999999985432 88999998888
Q ss_pred HhHHHHHHhhhhhhhcccc-------cchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccc
Q 007612 205 LNLGSLFSNTILGYFEDEG-------MWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVH 277 (596)
Q Consensus 205 ~~lg~~~~~~i~g~l~~~~-------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (596)
..+|..+...+.+.+.+.. +|++..++.+++.++..++.....|+.+.+.+.+++
T Consensus 149 ~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~------------------ 210 (428)
T PF13347_consen 149 SMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK------------------ 210 (428)
T ss_pred HHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc------------------
Confidence 8888876666665554321 577777776666555555444443431000000000
Q ss_pred cCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhH
Q 007612 278 LSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTI 357 (596)
Q Consensus 278 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (596)
+.+++... ....+.|.....+.......
T Consensus 211 ---------------------------------------------------~~~~~~~~-~~~~~nr~~~~l~~~~~~~~ 238 (428)
T PF13347_consen 211 ---------------------------------------------------KISLRDSL-RSLFRNRPFRILLLAFFLQW 238 (428)
T ss_pred ---------------------------------------------------ccccccch-hhhcccchHHHHHHHHHHHH
Confidence 00000000 00011122222221111111
Q ss_pred hHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHH
Q 007612 358 LYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVI 437 (596)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l 437 (596)
..+........++.....+.+ . ..+.+.....+..++..++..++. +|.+ +++.+..+.++
T Consensus 239 ~~~~~~~~~~~y~~~~vl~~~------~-~~~~~~~~~~~~~~v~~~~~~~l~----~r~g--------k~~~~~~~~~~ 299 (428)
T PF13347_consen 239 LAFALMNTFLPYYFTYVLGNE------G-LISIFMLIFFVASIVGSPLWGRLS----KRFG--------KKKVYIIGLLL 299 (428)
T ss_pred hhhhhhhhHHHHHHHHHhcCc------h-hhHHHHHHHHHHHHHHHHHHHHHH----HHcc--------ceeehhhhHHH
Confidence 111111111112221111111 1 122233344555666667776554 4444 22347788888
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCc-------hhHHHHHH
Q 007612 438 AIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPD-------GLKSFGSA 510 (596)
Q Consensus 438 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~-------~~rg~~~g 510 (596)
.+++.++..+.. ..+.++..+..++.|++.+..+...+++..|..+. +..|...|
T Consensus 300 ~~~~~~~~~~~~------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s 361 (428)
T PF13347_consen 300 AALGFLLLFFLG------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFS 361 (428)
T ss_pred HHHHHHHHHHHH------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHH
Confidence 888887776642 13677788888999999999998889999988873 45699999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhccccc
Q 007612 511 LCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYK 578 (596)
Q Consensus 511 l~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~ 578 (596)
+.++...++..+++.+.+.+.+..+-+... .................+.++..++.+.+..+++
T Consensus 362 ~~~~~~k~~~~la~~i~g~~l~~~Gy~~~~----~~q~~~~~~~i~~~~~~~p~~~~~~~~i~~~~y~ 425 (428)
T PF13347_consen 362 VNSFFIKIGQGLAGAIVGLLLALVGYDANA----AVQSASALSGIRILFSIVPAIFLLLAIIFMRFYP 425 (428)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhCcCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999887765332211 1122334444455555555555555545444443
No 104
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.73 E-value=1.2e-15 Score=160.27 Aligned_cols=156 Identities=13% Similarity=0.009 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHhhCCChHH-HHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 007612 60 VGVNLVLFLTRVLQQNNAE-AANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRG 138 (596)
Q Consensus 60 ~~~~l~~yl~~~lg~~~~~-~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (596)
..++..+|+.+++|++..+ .+.+.+.+..++.++.+++|+++||+ |-|+++.++.+..++..++++++.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~--------- 113 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGT--------- 113 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 3456677899999999999 99999999999999999999999997 999999999999999999999883
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhh
Q 007612 139 CGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGY 218 (596)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~ 218 (596)
+...+.+.|++.|++.|... +...++..++|+++ |+++.++.+.+..+|.+++++++++
T Consensus 114 --------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 114 --------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQL 172 (511)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37789999999999999999 99999999999999 9999999999999999999999998
Q ss_pred hcccccchHHHH---HHHHHHHHHHHHHHhcC
Q 007612 219 FEDEGMWALGFW---VSTGSAFAALVLFLAGT 247 (596)
Q Consensus 219 l~~~~~~~~~f~---~~~~~~~~~~~~~~~~~ 247 (596)
+ ..+||++-+. +......+++++.++++
T Consensus 173 l-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 173 L-VTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred H-HhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4 4578886543 44455556666655554
No 105
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.72 E-value=1.2e-15 Score=152.04 Aligned_cols=416 Identities=12% Similarity=0.051 Sum_probs=238.2
Q ss_pred HHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccC
Q 007612 57 FFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRP 136 (596)
Q Consensus 57 ~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (596)
.......+.+-+....|.+.-+...+......+..+++...|.++|++ |||+.+.+..+...+..++-+.+ |+
T Consensus 93 ~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s---pn--- 165 (528)
T KOG0253|consen 93 EMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS---PN--- 165 (528)
T ss_pred HHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC---CC---
Confidence 344455555566677788888899999999999999999999999997 99999888766655555554444 44
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhh
Q 007612 137 RGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTIL 216 (596)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~ 216 (596)
+..+.+.|.+.|+|.|+ .|...++..|..|... |....-+. ....+|.++...+.
T Consensus 166 -----------------f~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~v~ea~la 220 (528)
T KOG0253|consen 166 -----------------FASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQVFEALLA 220 (528)
T ss_pred -----------------eehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHHHHHHHHH
Confidence 78899999999999999 7999999999999887 77776666 67788998888776
Q ss_pred hhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCC
Q 007612 217 GYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTN 296 (596)
Q Consensus 217 g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~ 296 (596)
=.+....||||-.........+.....++.....+..-.++++.+ ....+....+..+.++|......+..++.++...
T Consensus 221 w~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~k-AletL~kiArmNg~qlplgvl~~s~~~~~e~e~~ 299 (528)
T KOG0253|consen 221 WGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYK-ALETLHKIARMNGKQLPLGVLESSAIDRQEQEES 299 (528)
T ss_pred HHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHH-HHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhh
Confidence 666677899987766554333333333333322222222333332 2234455566666778877666666655554333
Q ss_pred CCCccccccccchhhhhhhhccccccccccCCCCCCcccCccch-hhhhhhhhhHHHHH-HhHhHhhhhccccceeEe--
Q 007612 297 GNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQV-EEVKCILRLLPIWL-CTILYSVVFTQMASLFVE-- 372 (596)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 372 (596)
++.+...... + .+-........ .-+|+.+..+.+++ ....|+.........+..
T Consensus 300 ~~~~~~~~a~------------k----------e~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd 357 (528)
T KOG0253|consen 300 DLDDSKSSAA------------K----------EVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGD 357 (528)
T ss_pred chhhhhhccc------------c----------ccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccC
Confidence 3322211110 1 01000000111 12233332222222 122222211110000000
Q ss_pred --------eeccccccccccccC--Cccccc----cchh-hHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHH
Q 007612 373 --------QGAAMKTTVSNFRIP--PASMSS----FDIL-SVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVI 437 (596)
Q Consensus 373 --------~~~~~~~~~~~~~~~--~~~~~~----~~~~-~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l 437 (596)
.....+... +...+ ...... ...+ +.++.+.+ ++++.||. .|...+++
T Consensus 358 ~c~~~~r~~p~e~e~~~-~c~~s~~~dYrdllitslaefPGlLIt~~i----verlGRKk------------TMal~l~~ 420 (528)
T KOG0253|consen 358 ACPLYNRFLPTELETRA-NCPLSVAKDYRDLLITSLAEFPGLLITGVI----VERLGRKK------------TMALSLIL 420 (528)
T ss_pred ccccchhcchhHHHhhh-cCCccchhHHHHHHHHHHhhCCchhHHHHH----HHHhcchh------------HHHHHHHH
Confidence 000001000 00000 000100 0011 12222223 33333332 37777777
Q ss_pred HHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHH
Q 007612 438 AIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSIS 517 (596)
Q Consensus 438 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ 517 (596)
+++..+...... .........+..-+.....+.+.|.|.-|.+|...|+++.|.+..++.
T Consensus 421 f~iflfll~~c~--------------------~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaR 480 (528)
T KOG0253|consen 421 FGIFLFLLTTCK--------------------TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMAR 480 (528)
T ss_pred HHHHHHHHHHhc--------------------CcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHh
Confidence 666655443321 111122222333344455677888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccch
Q 007612 518 LGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKCIEL 582 (596)
Q Consensus 518 lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~~~ 582 (596)
+|+++.|++.. ....+ ....-.+.++.++++.+...++-.|+|+|..
T Consensus 481 IggI~~p~iA~-~~e~s-----------------~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 481 IGGIFSPVIAM-RAELS-----------------TSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred hhhhhhhHHHH-Hhccc-----------------eeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 99999998883 22111 0113456678888888888888888887754
No 106
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.71 E-value=9.1e-15 Score=148.82 Aligned_cols=150 Identities=15% Similarity=0.109 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 007612 44 IIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLV 123 (596)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~ 123 (596)
.++....+...+..- ....+.+.+++.++++..|++++...+..++.+++++.|++.+|+ |+|+.+++++.+++++..
T Consensus 16 v~~t~lFfl~G~~~~-l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 16 VLLTSLFFLWGFITC-LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHhh-cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 333333344433333 345566778899999999999999999999999999999999997 999999999999999998
Q ss_pred HHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHH
Q 007612 124 LLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYL 203 (596)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 203 (596)
++.-++. ..++..++++.++.+.|.+....+.+++++...|++. ...-+++.+.
T Consensus 94 lF~pAa~--------------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~ 147 (422)
T COG0738 94 LFWPAAS--------------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQA 147 (422)
T ss_pred HHhhhhh--------------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHH
Confidence 8875522 2458899999999999999999999999999999876 4555777888
Q ss_pred HHhHHHHHHhhhhhhhcc
Q 007612 204 ALNLGSLFSNTILGYFED 221 (596)
Q Consensus 204 ~~~lg~~~~~~i~g~l~~ 221 (596)
...+|+.++|++++++..
T Consensus 148 fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 148 FNGLGAILGPLLGSSLIL 165 (422)
T ss_pred hhhhHHHHHHHHHHHHHH
Confidence 889999999999998776
No 107
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.70 E-value=9.4e-15 Score=157.51 Aligned_cols=150 Identities=11% Similarity=0.071 Sum_probs=123.7
Q ss_pred HhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCC
Q 007612 70 RVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTH 149 (596)
Q Consensus 70 ~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (596)
+++++...+.+++.+++.++++++.+++|.+.||+ .-.+.+....+...+..++....
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~--------------------- 131 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV--------------------- 131 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 56778888999999999999999999999999997 86666666655554444444434
Q ss_pred CchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhh------cccc
Q 007612 150 SSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYF------EDEG 223 (596)
Q Consensus 150 ~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l------~~~~ 223 (596)
++.+.+++.|++.|+..++..|....+++.+|.+++ |+.-+++++....+|.++|.+++..+ ....
T Consensus 132 --~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 132 --HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred --hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 458889999999999999999999999999999999 99999999999999999999988775 2357
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcCcc
Q 007612 224 MWALGFWVSTGSAFAALVLFLAGTTR 249 (596)
Q Consensus 224 ~~~~~f~~~~~~~~~~~~~~~~~~~~ 249 (596)
||||.|++.+++.++..++.++..|.
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecC
Confidence 89999999987766665555554443
No 108
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.69 E-value=1.2e-15 Score=165.86 Aligned_cols=424 Identities=14% Similarity=0.087 Sum_probs=251.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVN---LVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~---l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
-|+++++.+..+...+++..- +-..+.++++.+..+.+|+.++......+..|+.+.+.||+ |.|++.++|.++..
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHH
Confidence 366666676676666665533 23456788999999999999999999999999999999997 99999999999999
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHH-HHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSI-YFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
+|.++..++++ .+.+++.. ++.|+|.|+........+..+|+ ++ |+.+.
T Consensus 123 ~g~~lssF~~~-----------------------i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kk------R~lA~ 172 (509)
T KOG2504|consen 123 LGLLLSSFATS-----------------------LWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KK------RALAT 172 (509)
T ss_pred HHHHHHHHHhh-----------------------HHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HH------HHHHH
Confidence 99999999832 65555555 56789999998888888887775 44 88999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhcccc
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHL 278 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (596)
++-..+..+|..+=|.+..++.+.+|||+.+++...+.+-.+......++.....++.+ ..+..+
T Consensus 173 Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~--~~~~~~------------- 237 (509)
T KOG2504|consen 173 GIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNE--EKDLRN------------- 237 (509)
T ss_pred hhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchh--hhhhcc-------------
Confidence 99888999999999999999999999999999877766555555555554332222220 000000
Q ss_pred CCCcccchhcccCCCCCCC-CCccccccccchhhhhhhhccccccccccCCCCCCccc-C--c-cchhhhhhhhhhHHHH
Q 007612 279 SAEGEDLYVIDANDSSTNG-NRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLC-P--V-TQVEEVKCILRLLPIW 353 (596)
Q Consensus 279 p~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~~~~~~~~~~ 353 (596)
+.. ..+....+..... .++....+ ....+........ .+....+-+.. . + ..++++..+...+...
T Consensus 238 ~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~ 308 (509)
T KOG2504|consen 238 SAA---SVESTPKPVELRISERDSGLKK-LSLSNLATLKRGP-----DKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNL 308 (509)
T ss_pred ccc---cccccccccccccccCCCCCCc-ccccchhhhhhCC-----ccccccchhhhhhhhhHHHHcCchHHHHHHHHH
Confidence 000 0000000000000 00000000 0000000000000 00000010000 0 0 1111111111112222
Q ss_pred HHhHhHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHH
Q 007612 354 LCTILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGI 433 (596)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~i 433 (596)
+....+...+..++.+... ...+.. ..+...++.++..++.-++.+.+.++-. ........+
T Consensus 309 ~~~~g~~~p~~~l~~~~~~--~g~~~~------~aa~l~Siigi~~i~gRi~~G~laD~~~----------~~~~~~~~~ 370 (509)
T KOG2504|consen 309 FAYLGFNVPFVYLPSYAKS--LGLSSN------DAAFLLSIIGVSDIIGRIILGLLADKPG----------IRALVLFLL 370 (509)
T ss_pred HHHHHHHHHHHHHHHHHhh--cCCChh------hhHHHHHHHHHhhhhhhhhhhhhcCccc----------cchHHHHHH
Confidence 2223333332222221111 111111 1222223333334444444443322211 114455667
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHH
Q 007612 434 GLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCM 513 (596)
Q Consensus 434 g~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~ 513 (596)
++++.+++.+..... .+.+.++...+++|+..+.........+.+..+.+.-..+.|+..
T Consensus 371 ~ll~~gl~~~~~p~~--------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l 430 (509)
T KOG2504|consen 371 TLLIAGLARLFLPFA--------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLL 430 (509)
T ss_pred HHHHHHHHHHHHHHh--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHH
Confidence 777777776555543 245667777788899888888777789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhc
Q 007612 514 TSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACA 574 (596)
Q Consensus 514 ~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~ 574 (596)
+++.++..+||.+.+.+.+.+ ++|+..|++.++..+++.+.+++..
T Consensus 431 ~~~gi~~l~gpPiag~~~d~t---------------g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 431 LFQGIGALVGPPIAGLLYDIT---------------GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHhHHHHHcCcccceeeeecc---------------CCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999999554422 3356678877777777776666655
No 109
>PTZ00207 hypothetical protein; Provisional
Probab=99.69 E-value=3e-13 Score=148.55 Aligned_cols=172 Identities=12% Similarity=0.106 Sum_probs=126.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
++|..+...++.+.+. ...|++.. ....+++++|+|..+.+++.+... ...++.+++|+++||+ |+|++++++.++
T Consensus 25 ~Rw~~lva~~~~~~~~-g~~y~fsv-~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll 100 (591)
T PTZ00207 25 RRFALLVLGAFCSICT-SFMYAFNL-ISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTV 100 (591)
T ss_pred chHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 4444444444444433 33455544 344678999999999999887743 3446777899999997 999999999999
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
+.++.++++++.. ..+ ..+.+.+++.|++.|+|.+...+.+...+.++|| ++ |+++
T Consensus 101 ~~iG~ll~ala~~-~~i----------------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a 156 (591)
T PTZ00207 101 FCLGTLLFALTFQ-EVI----------------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAV 156 (591)
T ss_pred HHHHHHHHHHHhc-ccc----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHH
Confidence 9999999888622 000 1348889999999999999888888999999997 56 9999
Q ss_pred HHHHHHHHhHHHHH-HhhhhhhhcccccchHHHHHHHHHHHHH
Q 007612 198 FSYFYLALNLGSLF-SNTILGYFEDEGMWALGFWVSTGSAFAA 239 (596)
Q Consensus 198 ~~~~~~~~~lg~~~-~~~i~g~l~~~~~~~~~f~~~~~~~~~~ 239 (596)
.++.....++|+.+ +++..+++. .+|+..|++.++..++.
T Consensus 157 ~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 157 VAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHH
Confidence 99999999999975 555555554 35777777665544433
No 110
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.68 E-value=9.3e-16 Score=154.86 Aligned_cols=147 Identities=12% Similarity=0.062 Sum_probs=132.8
Q ss_pred hhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCC
Q 007612 71 VLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHS 150 (596)
Q Consensus 71 ~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (596)
.++-++.+.|++.+...+.+.+..++.|.+.||+ |+|-.+++|..++..+.+++++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 4566778899999999999999999999999996 999999999999999999999983
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHH
Q 007612 151 SLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFW 230 (596)
Q Consensus 151 ~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~ 230 (596)
++..++++|.++|+|.++...+..++++|.||++.+ |++++|+.-....+|-.+||.++|.+.+..|++.+|.
T Consensus 158 --sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFl 230 (464)
T KOG3764|consen 158 --SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFL 230 (464)
T ss_pred --hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHH
Confidence 377899999999999999999999999999998874 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 007612 231 VSTGSAFAALVLFLAG 246 (596)
Q Consensus 231 ~~~~~~~~~~~~~~~~ 246 (596)
+.++.+++-..+-++.
T Consensus 231 VL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 231 VLAIVLLLDGALQLLV 246 (464)
T ss_pred HHHHHHHHHHHHHHhe
Confidence 9987777666554443
No 111
>PRK11462 putative transporter; Provisional
Probab=99.68 E-value=7e-14 Score=151.91 Aligned_cols=152 Identities=13% Similarity=0.122 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhc---cCchHH-HHHHHHHHHHHH
Q 007612 47 LLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSY---WGRFKT-CAIFQGIFVIGL 122 (596)
Q Consensus 47 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~~-l~~~~~~~~~~~ 122 (596)
.+..+..+..+..+..++..|+++.+|+++..+|.+..+.-+.-.+.-|+.|+++||. +||||. ++++.+.++++.
T Consensus 15 g~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~ 94 (460)
T PRK11462 15 GMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVC 94 (460)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHH
Confidence 3455566677777778899999999999999999999999999999999999999972 377655 556667777776
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFY 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (596)
+++... |.. ........+++.-.+..++..+......++.+++.+..++ |.+..++..
T Consensus 95 ~llf~~---p~~--------------s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e-----Rt~l~s~r~ 152 (460)
T PRK11462 95 VLAYST---PDL--------------SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ-----RISLQSWRF 152 (460)
T ss_pred HHHHhC---CCC--------------CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH-----HHHHHHHHH
Confidence 666544 220 0112234455555566788888888889999999875432 999999999
Q ss_pred HHHhHHHHHHhhhhhhhc
Q 007612 203 LALNLGSLFSNTILGYFE 220 (596)
Q Consensus 203 ~~~~lg~~~~~~i~g~l~ 220 (596)
.+.++|..+++.+...+.
T Consensus 153 ~~~~iG~~~~~~~~~plv 170 (460)
T PRK11462 153 VLATAGGMLSTVLMMPLV 170 (460)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999998888876654443
No 112
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.67 E-value=7e-14 Score=140.35 Aligned_cols=368 Identities=15% Similarity=0.163 Sum_probs=243.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 007612 46 ILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLL 125 (596)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~ 125 (596)
+.++.+--+...-++.+.+ .-+++++|+|.+.+|.+++...++..+.++++.+++.|+ |.++.+..++++..+|..+=
T Consensus 17 Ivlia~NLR~~itsvgPLL-~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR 94 (395)
T COG2807 17 IVLIAFNLRPAITSVGPLL-DEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIR 94 (395)
T ss_pred HHHHHhccchhhhhhhhhH-HHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHH
Confidence 3333344444444454433 457889999999999999999999999999999999997 99999999999888888765
Q ss_pred HhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHH
Q 007612 126 SLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLAL 205 (596)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 205 (596)
... +...++.+-.+.|.|.+..+...++++.+.||++. +..+++|....
T Consensus 95 ~~~------------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-------~~mtglYs~sl 143 (395)
T COG2807 95 SLG------------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-------GLMTGLYSTSL 143 (395)
T ss_pred hcc------------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-------hhHHhHHHHHH
Confidence 543 25668888899999999999999999999998764 68899999999
Q ss_pred hHHHHHHhhhhhhhcccc-cchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCccc
Q 007612 206 NLGSLFSNTILGYFEDEG-MWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGED 284 (596)
Q Consensus 206 ~lg~~~~~~i~g~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 284 (596)
++|+.+++.+.-.+.++. +|+....+-+...++++++.+--..|.+ .+..+.
T Consensus 144 ~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~--~~~~~~------------------------- 196 (395)
T COG2807 144 GAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQ--AASIAT------------------------- 196 (395)
T ss_pred HHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccccc--cccccc-------------------------
Confidence 999999998888888776 7999888877776666654432211111 000000
Q ss_pred chhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhc
Q 007612 285 LYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFT 364 (596)
Q Consensus 285 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (596)
..+....-|+ +...+...+-.-..+..+++.+.
T Consensus 197 ---------------------------------------~~~~~~~vw~--------~~~aW~vtLfmGlqS~~~Y~~~~ 229 (395)
T COG2807 197 ---------------------------------------KLVSVRKVWR--------SPLAWQVTLFMGLQSLLYYIVIG 229 (395)
T ss_pred ---------------------------------------cccccccccc--------CchhHHHHHHHHhhHHHHHHHHH
Confidence 0000011121 22233333334456778888889
Q ss_pred cccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHH
Q 007612 365 QMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLA 444 (596)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~ 444 (596)
+++.++.++.. +.. ..+.+-.+.....+..+.+...+.. |..| .+........++.+++.-
T Consensus 230 WLP~ili~~G~--sa~------~aG~llsl~~l~~~~~~ll~P~la~----R~~n-------~r~~~~~~~~~~l~G~~G 290 (395)
T COG2807 230 WLPAILIDRGL--SAA------EAGSLLSLMQLAQLPTALLIPLLAR----RSKN-------QRPLVVLALLLMLVGLVG 290 (395)
T ss_pred HHHHHHHHcCC--CHH------HhhhHHHHHHHHHHHHHHHHHHHHH----Hhcc-------cchHHHHHHHHHHHHHHH
Confidence 99888776432 222 1233333333333333333333322 2221 223344455555555544
Q ss_pred HHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCc-hhHHHHHHHHHHHHHHHHHHH
Q 007612 445 AGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPD-GLKSFGSALCMTSISLGNYVS 523 (596)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~-~~rg~~~gl~~~~~~lg~~lg 523 (596)
+.+... +..++| .+++|+|.+..+|...+++...+++ +..+.-+|+.+..+.+-..+|
T Consensus 291 ~~~~P~-----------------~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~G 349 (395)
T COG2807 291 LLLAPG-----------------QLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFG 349 (395)
T ss_pred HHHhhh-----------------hHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhh
Confidence 443211 122333 4889999999999999999888774 566777888888889999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcc
Q 007612 524 SLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAK 575 (596)
Q Consensus 524 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~ 575 (596)
|.++|.+.|.+ ++++..+..++...++..++-+...|
T Consensus 350 P~l~G~lhDa~---------------gsw~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 350 PWLFGFLHDAT---------------GSWSAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred hhhHhHHHHhc---------------CChHHHHHHHHHHHHHHHHHHhhcch
Confidence 99999887754 33345666666666666555554443
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.64 E-value=3.9e-13 Score=141.99 Aligned_cols=367 Identities=14% Similarity=0.067 Sum_probs=227.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhc---cCchH-HHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSY---WGRFK-TCAIFQG 116 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~-~l~~~~~ 116 (596)
|.-+.-....+..+..+-.+..++..|.++..|+++..+|.+..+.-+.-++.-|+.|.++||. +||+| -++.+.+
T Consensus 12 ~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i 91 (467)
T COG2211 12 KEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI 91 (467)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH
Confidence 3344555667777778888889999999999999999999999999999999999999999983 26554 5666777
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
.+++..+++..+ |.. . ........++.-.+.+++.........++..++.+..++ |.+
T Consensus 92 p~~i~~~l~F~~---p~~-------------~-~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E-----R~~ 149 (467)
T COG2211 92 PFAIVAVLLFIT---PDF-------------S-MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE-----RAS 149 (467)
T ss_pred HHHHHHHHHHcC---CCc-------------c-cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH-----HHH
Confidence 888888877766 210 0 012344455556678899999999999999999875443 999
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhcc-------cccchHHHHHHHHHHHHHHHHHHhcCc-ceeccCCCCChhHHHHHHHH
Q 007612 197 FFSYFYLALNLGSLFSNTILGYFED-------EGMWALGFWVSTGSAFAALVLFLAGTT-RYRHFKPSGNPLARFCQVIV 268 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i~g~l~~-------~~~~~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 268 (596)
..++-....++|..+...+.+.+.. ..||+..-++..++..+.+++.+...+ |..+..+.++.
T Consensus 150 l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~--------- 220 (467)
T COG2211 150 LTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTG--------- 220 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccc---------
Confidence 9999999999997776655554432 235666555555444444433333222 22111111000
Q ss_pred HHHHhhccccCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhh
Q 007612 269 AATKKWRVHLSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILR 348 (596)
Q Consensus 269 ~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (596)
....+.+.- ....+.|.++.
T Consensus 221 ------------------------------------~~~~~~~~~------------------------~~~~~Nrp~~~ 240 (467)
T COG2211 221 ------------------------------------VKLKLKDSF------------------------LLIFKNRPLLL 240 (467)
T ss_pred ------------------------------------ccccHHHHH------------------------HHHHccchHHH
Confidence 000000000 00112233332
Q ss_pred hHHHHHHhHhHhhhhccccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChH
Q 007612 349 LLPIWLCTILYSVVFTQMASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTEL 428 (596)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~ 428 (596)
.+...+...+..........+|+....+.++. .+...........++..++.. ++.+|++ ++
T Consensus 241 ~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l------~~~~~~~~~~~~~l~~~~~~p----~L~~~~g--------kk 302 (467)
T COG2211 241 LLLMNLLLFIAFNIRGSIMVYYVTYVLGDPEL------FAYLLLLASGAGLLIGLILWP----RLVKKFG--------KK 302 (467)
T ss_pred HHHHHHHHHHHHHHHhhhhheeEEEEcCChHH------HHHHHHHHHHHHHHHHHHhHH----HHHHHhc--------hH
Confidence 22222222222222222223444433222221 111111112222222233443 3344554 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCC-------
Q 007612 429 QRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAP------- 501 (596)
Q Consensus 429 ~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P------- 501 (596)
+...+|.++.+++.+...+.. ..+.+.+++..++.+++.+...+..++++.|...
T Consensus 303 ~~~~~~~~~~~i~~~~~~f~~------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG 364 (467)
T COG2211 303 KLFLIGLLLLAVGYLLLYFTP------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTG 364 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhc------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhC
Confidence 568888888888887777642 2355666667788899999999999998888743
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 007612 502 DGLKSFGSALCMTSISLGNYVSSLLLTMVMKIS 534 (596)
Q Consensus 502 ~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~ 534 (596)
.+..|...|...+++-+|.+++..+.+.+....
T Consensus 365 ~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 365 VRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 456788999999999999999999999888765
No 114
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.63 E-value=7e-15 Score=161.27 Aligned_cols=179 Identities=10% Similarity=0.055 Sum_probs=129.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIF 118 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~ 118 (596)
+++.....+...++....+|++..++|.|+++.+|++..+.+...+...++..++.+++|+++||+ |||+.++++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 445555455555667788999999999999988999998888888888888999999999999997 9999988877654
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.++.+.+..... ..+...+++++++.+++.+...+....++.+.+|++. |+++.
T Consensus 327 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~ 380 (490)
T PRK10642 327 FVLAIPAFILIN--------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSAL 380 (490)
T ss_pred HHHHHHHHHHHh--------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHH
Confidence 443332222101 0125566778888887777666777888889999999 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccc-cchHHHHHHHHHHHHHHHHHH
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEG-MWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~-~~~~~f~~~~~~~~~~~~~~~ 244 (596)
++.+....+++.++|.+.+++.+.. +|+.++++..+..++.++..+
T Consensus 381 g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 427 (490)
T PRK10642 381 AAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV 427 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 9854546667788999999887654 466666554444444444333
No 115
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.55 E-value=1.2e-11 Score=133.89 Aligned_cols=92 Identities=14% Similarity=0.077 Sum_probs=74.8
Q ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCC
Q 007612 470 SIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNK 549 (596)
Q Consensus 470 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~ 549 (596)
+.+.+.+.-++.|+..+...+..-++..++.|++..+...|++.+.....+++||++.+.+.+.++
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg-------------- 444 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG-------------- 444 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------
Confidence 334445555788999999999999999999999999999999999999999999999999887552
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhccc
Q 007612 550 GHLDRFYFLLAGLTTVDFVVYIACAKW 576 (596)
Q Consensus 550 ~~~~~~f~~~a~i~~i~~~~~~~~~~~ 576 (596)
+.+..++.+.++.++++++.+.+..+
T Consensus 445 -~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 445 -SQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred -CchhHHHHHHHHHHHHHHHHhhccch
Confidence 23456777788888887777555443
No 116
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.52 E-value=2.9e-11 Score=124.59 Aligned_cols=378 Identities=13% Similarity=0.038 Sum_probs=222.8
Q ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccC-----chH-HHHHHHHHHHHHHHHHHhhhccccccCCCCCC
Q 007612 68 LTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWG-----RFK-TCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGN 141 (596)
Q Consensus 68 l~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G-----r~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (596)
+..+++++..-.+..++...+... ..+..|+.||+. + ||. -+..+.+++..+..++.++...-. .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~-------~ 76 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA-------E 76 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc-------c
Confidence 456889998888888888877665 578899999996 6 444 456677777777766665422111 0
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcc
Q 007612 142 ELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFED 221 (596)
Q Consensus 142 ~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~ 221 (596)
+....+.+.........+.-.+.|+|.+...++..++++|..|+++ |++..++.+...-+|.+++.++.|.+.+
T Consensus 77 ~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~ 150 (403)
T PF03209_consen 77 SGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLD 150 (403)
T ss_pred cccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 0000001111122344445556888888999999999999999999 9999999988889999999999998887
Q ss_pred cccchHHHHHH----HHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCCCCCC
Q 007612 222 EGMWALGFWVS----TGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDSSTNG 297 (596)
Q Consensus 222 ~~~~~~~f~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~ 297 (596)
.++..-..-+. .+..++.++..+-..++.++..+..
T Consensus 151 ~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~---------------------------------------- 190 (403)
T PF03209_consen 151 PFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAA---------------------------------------- 190 (403)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCC----------------------------------------
Confidence 76533222221 1222222222222222221111000
Q ss_pred CCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhh-HHHHHHhHhHhhhhccccceeEeeecc
Q 007612 298 NRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRL-LPIWLCTILYSVVFTQMASLFVEQGAA 376 (596)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (596)
..+..++.+.... +...++..++ ..++.....++.....+-++
T Consensus 191 -----~~~~~~f~~a~~~------------------------~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPy------- 234 (403)
T PF03209_consen 191 -----ERPRPPFREAWRQ------------------------VWASPQARRFFVFLFLGTLAFFMQDVILEPY------- 234 (403)
T ss_pred -----CCCCccHHHHHHH------------------------HHhCCChhHHHHHHHHHHHHHHhhHHHcCCc-------
Confidence 0000011111000 0001111111 22233334444333222111
Q ss_pred cccccccccc-CCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 007612 377 MKTTVSNFRI-PPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKY 455 (596)
Q Consensus 377 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~ 455 (596)
.-++.|++. .+..++.+...+.++...+.+++..| |.+ +.+...+|..+.++++.......
T Consensus 235 -gg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~---~~~--------~~~~a~~G~~~~~~~f~lii~a~------ 296 (403)
T PF03209_consen 235 -GGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR---RLG--------KKRTAALGCLLGALAFALIILAG------ 296 (403)
T ss_pred -hhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCC--------chHHHHHHHHHHHHHHHHHHHHH------
Confidence 111111211 23445666677777777777765443 322 33445567777777766554432
Q ss_pred hcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007612 456 AKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKIST 535 (596)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~ 535 (596)
...+.+.+.+..+++|++.++......+.+.+..+++..|..+|.+...+.++..++.++.+.+.|...
T Consensus 297 -----------~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~ 365 (403)
T PF03209_consen 297 -----------PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR 365 (403)
T ss_pred -----------hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112466677888999999999999999999999999999999999999999999999999988776542
Q ss_pred cCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 007612 536 EDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYI 571 (596)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~ 571 (596)
+..++....+|..+|..=++..++++++..
T Consensus 366 ------~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 366 ------ALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred ------HhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 221111234566677666666666555443
No 117
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.49 E-value=3.5e-13 Score=138.03 Aligned_cols=180 Identities=22% Similarity=0.190 Sum_probs=149.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhcc-CchHHH-HHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYW-GRFKTC-AIFQGIF 118 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~-Gr~~~l-~~~~~~~ 118 (596)
|.+|.+++..++.-+.-|++..|.|.|+.+..|+|..++++..+.+-.+...++++.|++|||++ |||... +++++..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999976 666544 4455555
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.++.+...++ |+ .+..+..+..+..|+..-+.+-.+.....|..|++- -|++.
T Consensus 332 ~~~~~~~w~~---~~------------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~ 384 (448)
T COG2271 332 TASLVLYWLA---PN------------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTAT 384 (448)
T ss_pred HHHHHHHHcC---CC------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchh
Confidence 6666666655 33 346777788888888887777777788889998887 78899
Q ss_pred HHHHHHHhH-HHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcC
Q 007612 199 SYFYLALNL-GSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 199 ~~~~~~~~l-g~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
|+......+ |..++....|++.|.+||...|.+..+..+++.+++....
T Consensus 385 Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 385 GFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred chhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 998888877 9999999999999999999999887766666655544433
No 118
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.49 E-value=2.7e-13 Score=143.50 Aligned_cols=195 Identities=18% Similarity=0.165 Sum_probs=148.2
Q ss_pred CccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCc-
Q 007612 30 RPAIRAKSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTR-VLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGR- 107 (596)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr- 107 (596)
+...+..+.+||.+++..+..++....++.+.+..-+|+++ +.+.+.+..|++++...++..++++..|+.+.|. |+
T Consensus 23 ~~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~ 101 (488)
T KOG2325|consen 23 LSPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSV 101 (488)
T ss_pred cccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCc
Confidence 34556667899999999999999999888888878889864 4777888899999999999999999999999996 75
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccc
Q 007612 108 FKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEED 187 (596)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 187 (596)
|+.++.+.++.++|.++.......|+ ...++++++|++.|+|.|.. ...-+++++....++
T Consensus 102 k~Pli~s~ii~~~g~llY~~l~~~~~------------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d 162 (488)
T KOG2325|consen 102 KKPLIVSFLIAIIGNLLYLALAYVPN------------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED 162 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhccc------------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc
Confidence 78888899999999888744323233 25788999999999997764 677788888877778
Q ss_pred cccccchhhHHHHHHHHHhHHHHHHhhhhhhhc----cc---------ccchHHHHHHHHHHHHHHHHHHhcCcce
Q 007612 188 AKEGHSKVAFFSYFYLALNLGSLFSNTILGYFE----DE---------GMWALGFWVSTGSAFAALVLFLAGTTRY 250 (596)
Q Consensus 188 ~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~----~~---------~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 250 (596)
|.++++....+..+|..+||.+...+. .. ..|..+-|+.+++.++.++++....++.
T Consensus 163 ------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 163 ------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred ------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 888888877766677777766544332 11 1245566666666666666555555543
No 119
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.48 E-value=1.9e-12 Score=137.96 Aligned_cols=174 Identities=11% Similarity=0.037 Sum_probs=130.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+..+..+.........++....++|.|+++++|+++.+.+.+.+...++..++.++.|+++||+ |||+.+..+.+...+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~ 294 (393)
T PRK15011 216 RDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVC 294 (393)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 3334444444444455556667899999999999999999988887788888999999999997 999988777655544
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
....+.+. ++...+++.+++.+++.|...+....+..|.+| ++ |+++.++
T Consensus 295 ~~~~~~~~-----------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~------~g~~~~~ 344 (393)
T PRK15011 295 FYAGMLMA-----------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQ------AGSATTL 344 (393)
T ss_pred HHHHHHHH-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CC------cchHHHH
Confidence 44333333 225556667777777777666667777888887 45 7789999
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
++...++|..++|.++|++.+..+|+..|++..+..+++++..+.
T Consensus 345 ~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 345 YTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 888899999999999999999889999998877766666655543
No 120
>PRK09952 shikimate transporter; Provisional
Probab=99.48 E-value=1.5e-12 Score=140.70 Aligned_cols=184 Identities=12% Similarity=-0.021 Sum_probs=133.7
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH
Q 007612 37 SGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG 116 (596)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~ 116 (596)
+++++.........++....+|.+.++.+.|+++.+|++......+.....+...++.++.|+++||+ ||||++..+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~ 324 (438)
T PRK09952 246 LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGAL 324 (438)
T ss_pred HHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHH
Confidence 34444444445566777788898999999999999999988766666666777788899999999997 99999888766
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
+.+++.+.+....... .....+++..++.+++.+...+..++++.|.+|++. |++
T Consensus 325 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~t 379 (438)
T PRK09952 325 IGTLSAFPFFMALEAQ-------------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYS 379 (438)
T ss_pred HHHHHHHHHHHHHHcC-------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHH
Confidence 5555443333221000 123344445566678878878888999999999988 988
Q ss_pred HHHH-HHHHHhHHHHHHhhhhhhhcccc--cchHHHHHHHHHHHHHHHHHHhc
Q 007612 197 FFSY-FYLALNLGSLFSNTILGYFEDEG--MWALGFWVSTGSAFAALVLFLAG 246 (596)
Q Consensus 197 ~~~~-~~~~~~lg~~~~~~i~g~l~~~~--~~~~~f~~~~~~~~~~~~~~~~~ 246 (596)
+.++ ++.+..+|+.++|.+.+++.+.. +|..++.+.++..+++.+..+..
T Consensus 380 g~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 380 GAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 9998 55556699999999999997743 48888877766666665555444
No 121
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.47 E-value=1.3e-12 Score=142.41 Aligned_cols=177 Identities=15% Similarity=0.067 Sum_probs=134.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.+|..++..++....++++..++|.|+++.+|+|..++++..+...++..++.+++|+++||+ |||+.+.+...+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 5688888888888888889999999999999999999999999999999999999999999997 998877665444443
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+..++.+... .+....++.+++.|++.............|.+|++. |+++.|+
T Consensus 337 ~~~~~~~~~~---------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi 389 (467)
T PRK09556 337 IFTLGVYQHA---------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGI 389 (467)
T ss_pred HHHHHHHHhc---------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHH
Confidence 3322222200 124445566666665433333333456679999998 9999999
Q ss_pred HHHHHhH-HHHHHhhhhhhhcc------------cccchHHHHHHHHHHHHHHHHHHh
Q 007612 201 FYLALNL-GSLFSNTILGYFED------------EGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 201 ~~~~~~l-g~~~~~~i~g~l~~------------~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
.+...++ |+.++|.+.|++.+ ..+|+..|++..+..+++.+..+.
T Consensus 390 ~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 390 KGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 9998886 77999999999998 578999998877666666555443
No 122
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.45 E-value=2.1e-12 Score=135.51 Aligned_cols=169 Identities=19% Similarity=0.133 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
..+......++..........+.+.|. +++|.++.+.+...+...++..++.++.|+++||+ |||+.+.++.++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHH
Confidence 444455455555555555556666665 56899999999999999999999999999999997 9999999988888887
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.+++.+. ++ .+...++...++.+++.+...+..++++.|.+|+++ |++.++++
T Consensus 284 ~~~~~~~---~~------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~ 336 (377)
T TIGR00890 284 MAAMLFI---PM------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFL 336 (377)
T ss_pred HHHHHHc---cc------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHH
Confidence 7766655 11 113334455677788888888888899999999998 99999999
Q ss_pred HHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHH
Q 007612 202 YLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAA 239 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~ 239 (596)
+...++|..++|.+.|++.+..||++.|++.++..+++
T Consensus 337 ~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 337 YTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 99999999999999999999999999998877655544
No 123
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.43 E-value=1.3e-12 Score=137.82 Aligned_cols=173 Identities=19% Similarity=0.090 Sum_probs=133.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH
Q 007612 37 SGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG 116 (596)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~ 116 (596)
+++++.++......++....++.+..+++.|+++++|.+..+.+...+...++..++.++.|+++||+ |||+.++++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~ 293 (394)
T TIGR00883 215 TKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTV 293 (394)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHH
Confidence 34444567777777888888888889999999889999999999999999999999999999999997 99998776554
Q ss_pred HHHHHH-HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 117 IFVIGL-VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 117 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
+..+.. ........ . .+...++...++.+++.+...+...+++.|.+|++. |+
T Consensus 294 ~~~~~~~~~~~~~~~--~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~ 347 (394)
T TIGR00883 294 LAALLAVPLLMALLD--S------------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RY 347 (394)
T ss_pred HHHHHHHHHHHHHhc--C------------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------ee
Confidence 443332 22221100 0 124556666778888888888999999999999988 88
Q ss_pred hHHHH-HHHHHhHHHHHHhhhhhhhccccc-chHHHHHHHHHH
Q 007612 196 AFFSY-FYLALNLGSLFSNTILGYFEDEGM-WALGFWVSTGSA 236 (596)
Q Consensus 196 ~~~~~-~~~~~~lg~~~~~~i~g~l~~~~~-~~~~f~~~~~~~ 236 (596)
++.++ ++....+|..++|.++|++.+..| |+..++...+..
T Consensus 348 ~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 348 TGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred eEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 88887 556677899999999999998887 887766655443
No 124
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.43 E-value=6.3e-13 Score=128.26 Aligned_cols=366 Identities=12% Similarity=0.127 Sum_probs=211.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
.++.+.|+..++..+.| ---.-+..+++.+.+++.++..++.+.+..-..+.+.++|++.||.+|-|..-++-+....+
T Consensus 44 m~lv~mc~lgfgsyfcy-d~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~ 122 (459)
T KOG4686|consen 44 MALVFMCLLGFGSYFCY-DAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFL 122 (459)
T ss_pred HHHHHHHHhcccceeec-CCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHH
Confidence 34555555555444433 23344667778888888888899999999999999999999999987877665555555566
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
|.++++.-.- .+..+++..+|++.|+|.-....+.+.+...+|..++ .+..+|+
T Consensus 123 GqliFa~Ggi--------------------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGl 176 (459)
T KOG4686|consen 123 GQLIFAAGGI--------------------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGL 176 (459)
T ss_pred HHHHHHhchH--------------------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhH
Confidence 6665553211 1458999999999999988888899999999999888 8899999
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCC
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSA 280 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 280 (596)
......+|...-..+.+++.+..+--.+ ...-..+++.+.+-. +. ....+.-+...
T Consensus 177 qlSvAR~GstvNf~lm~~ly~~~~~~~~---~~ghT~LG~~l~~~~-~t-------------c~~slical~l------- 232 (459)
T KOG4686|consen 177 QLSVARLGSTVNFLLMPFLYDTMGRMFP---GVGHTLLGLWLCFEV-KT-------------CKQSLICALSL------- 232 (459)
T ss_pred HHHHHHhhceeeeeecHHHHHHHHHhcc---cchHHHHHHHHHHHH-HH-------------HHHHHHHHHHh-------
Confidence 8888889988777777777664331110 000011111000000 00 00000000000
Q ss_pred CcccchhcccCCCCCCCCCccccccccchhhhhh-hhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhH
Q 007612 281 EGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAA-YISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILY 359 (596)
Q Consensus 281 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (596)
.+.|+.+ -+.+++ +...+ ..| +.+.++..+. .+..+.+.+++|
T Consensus 233 ---------------------------g~~D~rAerilh~e--~g~~G-e~p----kLtdv~~f~p--pfw~~~iicv~y 276 (459)
T KOG4686|consen 233 ---------------------------GLSDDRAERILHLE--EGFLG-EEP----KLTDVNTFYP--PFWVLVIICVLY 276 (459)
T ss_pred ---------------------------hhhhhHHHHHHhhh--cCccc-CCc----ccccccccCc--cHHHHHHHHHHH
Confidence 0000000 000000 00000 001 0011111111 112233334444
Q ss_pred hhhhcc---ccceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHH
Q 007612 360 SVVFTQ---MASLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLV 436 (596)
Q Consensus 360 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~ 436 (596)
++...- ....+.+ ..++-.....+.+.+..-+...+..|+.+.+++++.++. +.+..+.+
T Consensus 277 yva~fPFi~lg~~fF~------~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~-----------~wv~~a~~ 339 (459)
T KOG4686|consen 277 YVAWFPFITLGPMFFQ------KRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL-----------WWVASACI 339 (459)
T ss_pred HHHHHHHhhhhHHHHH------HhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee-----------hhHHHHHH
Confidence 443322 1122222 111111222333433334445566677777766655443 34455555
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHH
Q 007612 437 IAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSI 516 (596)
Q Consensus 437 l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~ 516 (596)
...++...+.+.. +++ ...+.++|++..+..-..|-.+....|.++-|++.|..+..+
T Consensus 340 ~tl~~H~~l~Ft~-------------------lsP---y~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIq 397 (459)
T KOG4686|consen 340 LTLLGHSGLFFTF-------------------LSP---YTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQ 397 (459)
T ss_pred HHHHHhhhHHhhh-------------------ccH---HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHH
Confidence 5555555444422 222 346778899988888888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 007612 517 SLGNYVSSLLLTMVMK 532 (596)
Q Consensus 517 ~lg~~lg~~l~~~i~~ 532 (596)
++|-++.+.+.+++.+
T Consensus 398 NLgla~i~Iiag~i~d 413 (459)
T KOG4686|consen 398 NLGLAFIPIIAGFIAD 413 (459)
T ss_pred hhhhhHHhhhhheeec
Confidence 9999999999997754
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.42 E-value=5.6e-12 Score=134.35 Aligned_cols=170 Identities=15% Similarity=0.124 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhc
Q 007612 51 GLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSY 130 (596)
Q Consensus 51 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~ 130 (596)
.+....++....+++.|+.+ .|.+ +.++..+.+.++..++.++.|+++||+ ||||.+.++..+..++..++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~-- 299 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLA-- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh--
Confidence 33455566677788888764 4653 345666778888889999999999997 99999988888777777666654
Q ss_pred cccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHH
Q 007612 131 LFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSL 210 (596)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 210 (596)
+ +...+++.+++.|++.+...+.......+.+|++. |+++.++++...++|..
T Consensus 300 -~--------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ 352 (399)
T PRK05122 300 -P--------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSLG 352 (399)
T ss_pred -c--------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHH
Confidence 2 25556777888999998888888888889999888 99999999999999999
Q ss_pred HHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceecc
Q 007612 211 FSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHF 253 (596)
Q Consensus 211 ~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 253 (596)
++|.+.|++.+..||++.|++.++..++++++.+...++.+++
T Consensus 353 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (399)
T PRK05122 353 ITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRA 395 (399)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 9999999999989999999988877777666666555554443
No 126
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.41 E-value=2.3e-11 Score=125.66 Aligned_cols=382 Identities=11% Similarity=0.007 Sum_probs=211.0
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCC
Q 007612 64 LVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNEL 143 (596)
Q Consensus 64 l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (596)
+.+|..+.+| +...+-|...++.+.+....+.+-|+.||+ |-|...+++..+-.+|..+=.++.. |.+.
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss~-p~v~-------- 135 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISSL-PFVP-------- 135 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhccC-cccc--------
Confidence 3456677778 666778999999999999999999999997 9999999999999999888776632 4321
Q ss_pred CCCCCCCchhHH--HHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcc
Q 007612 144 TPCGTHSSLEIC--LFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFED 221 (596)
Q Consensus 144 ~~~~~~~~~~~~--~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~ 221 (596)
+... +.+.+..+.+...-.+.....-+..-||++++ |.++..+-.++..+|..+|..+...+..
T Consensus 136 --------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 136 --------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred --------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceecC
Confidence 2233 67777777777777766666677788999999 8888888777766776666655555543
Q ss_pred c------ccchHH--HHHHHHHHHHHHHHHHhcCcceeccCCCCChhHHHHHHHHHHHHhhccccCCCcccchhcccCCC
Q 007612 222 E------GMWALG--FWVSTGSAFAALVLFLAGTTRYRHFKPSGNPLARFCQVIVAATKKWRVHLSAEGEDLYVIDANDS 293 (596)
Q Consensus 222 ~------~~~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~~ 293 (596)
+ ..|... |+...+...+.+.+..+.+++.++.+|.......
T Consensus 202 ~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~------------------------------- 250 (480)
T KOG2563|consen 202 SSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAAL------------------------------- 250 (480)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhh-------------------------------
Confidence 3 334432 3322233333333333444433333332111000
Q ss_pred CCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhHhHhhhhccccceeEee
Q 007612 294 STNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTILYSVVFTQMASLFVEQ 373 (596)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (596)
. +.++.... ....+++..++..+...+....++.....+...
T Consensus 251 -----~------~~~f~~si-----------------------~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~---- 292 (480)
T KOG2563|consen 251 -----Q------DASFPKSI-----------------------KSCFKNRQFIILAICYGIGLGLFNSLSTLLNLA---- 292 (480)
T ss_pred -----h------cCcHHHHH-----------------------HHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhc----
Confidence 0 00000000 000111121211111111122222222211100
Q ss_pred ecccccccccc-ccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHhh
Q 007612 374 GAAMKTTVSNF-RIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVA-MLAAGIVECY 451 (596)
Q Consensus 374 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~-~~~~~~~~~~ 451 (596)
+... ++ +...+.+.....+..++.+.+.+. +.||.+ + .+..+.+-.....++ +.+..+..
T Consensus 293 ---l~~s--gY~~~~aG~ig~l~iv~Gmlga~~~gi----i~Dktk--~-----fk~~~~v~~~~~~v~~~~l~~~t~-- 354 (480)
T KOG2563|consen 293 ---LCPS--GYEGVFAGYIGALMIVAGMLGALASGI----IADKTK--K-----FKLTTLVLYLFALVGTLMLLTCTL-- 354 (480)
T ss_pred ---cccc--cCCccccchhHHHHHHHHHHHHHHHHh----hhhhhh--h-----HHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 1111 11 111233333334444444444444 445532 0 222333333333333 22222211
Q ss_pred hhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 452 RLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVM 531 (596)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~ 531 (596)
..-..+++.....++|+......|...++..|..=+..-|+..|+.++.+++=+.+-.++.+...
T Consensus 355 ---------------~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~ 419 (480)
T KOG2563|consen 355 ---------------FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILA 419 (480)
T ss_pred ---------------cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHh
Confidence 11234455566677888888888999999999988899999999988887776666666666443
Q ss_pred hhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccccccchhh
Q 007612 532 KISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKCIELEA 584 (596)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~~~~~ 584 (596)
+.... .+| ....-+.+...+++.+++.+++.+++++++.|.
T Consensus 420 ~~~~~---~~~---------~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e~ 460 (480)
T KOG2563|consen 420 EDLGP---PGN---------TFPANIFLTVSALLGAILVAFFRPDYRRLRAEA 460 (480)
T ss_pred hccCC---CCC---------CccchhHhHHHHHHHHHHHhhhhhhHHhHhhhh
Confidence 31110 011 111224567777777777788888887766654
No 127
>PRK03699 putative transporter; Provisional
Probab=99.41 E-value=6.9e-12 Score=133.61 Aligned_cols=171 Identities=11% Similarity=0.096 Sum_probs=133.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.++...+..++....++++..++|.|+++.+|+|..+++...+.+.++..++.+++|+++||+ |||+.+.....+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 4556666667777777888899999999999999999999999999999999999999999997 999998877766555
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
...++... ++ ...+.+..++.|++.+...+...+...+..|. . +++..++
T Consensus 284 ~~~~~~~~---~~--------------------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~------~~~~~g~ 333 (394)
T PRK03699 284 LMYLFVNT---DD--------------------PSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-A------SPKLVNF 333 (394)
T ss_pred HHHHHHHc---CC--------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-C------CHHHHHH
Confidence 54444433 11 33444556677887777777777777776653 3 4566788
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHH
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVL 242 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~ 242 (596)
.....++|..++|.+.|++.+..|++..|++..+..+++.+.
T Consensus 334 ~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 334 ILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 788889999999999999999999999998777665555443
No 128
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.41 E-value=1e-11 Score=130.70 Aligned_cols=176 Identities=15% Similarity=-0.010 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHH-HHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKT-CAIFQGIFV 119 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~-l~~~~~~~~ 119 (596)
+.++..++..++.....+.+..+++.|+++.+|.+..+.+++.+...++..++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 5677778888888888888999999999999999999999999999999999999999999997 88862 111111111
Q ss_pred HH---HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 120 IG---LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 120 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
++ ..+..+... . ..+.........+.+.+.+ ..+...+++.|.+|++. |++
T Consensus 294 ~~~~~~~~~~~~~~--~-----------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~ 347 (399)
T TIGR00893 294 IAGLVLSLLMFATN--Y-----------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGL 347 (399)
T ss_pred HHHHHHHHHHHHhc--c-----------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHH
Confidence 11 111111100 0 0123333333333444444 78999999999999998 999
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhccccc-chHHHHHHHHHHHHHHHHH
Q 007612 197 FFSYFYLALNLGSLFSNTILGYFEDEGM-WALGFWVSTGSAFAALVLF 243 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i~g~l~~~~~-~~~~f~~~~~~~~~~~~~~ 243 (596)
++++.+...++|..++|.+.|++.+..| |+..|++.++..+++.+..
T Consensus 348 ~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 348 TGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888 9999888776666555444
No 129
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.40 E-value=5.9e-12 Score=135.23 Aligned_cols=178 Identities=15% Similarity=0.111 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------hHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHH
Q 007612 44 IIILLNQGLATLAFFGVGVNLVLFLTRVLQQN--------NAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQ 115 (596)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~--------~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~ 115 (596)
+..++..++..........+++.|+.+ .|.+ ....+...+...+...++.++.|+++||+ |||+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~ 288 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSL 288 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence 334444444444444455677788754 4544 35668888888999999999999999997 9999999999
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 116 GIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
++..++..++..... + ..+...+++.+++.|++.+...+....++.|.+|++. |+
T Consensus 289 ~~~~v~~~l~~~~~~--~-----------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g 343 (418)
T TIGR00889 289 VAWALRFGFFAYGDP--E-----------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RA 343 (418)
T ss_pred HHHHHHHHHHHHcCc--c-----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HH
Confidence 888887666655311 0 0124566778889999998888999999999999999 99
Q ss_pred hHHHHHH-HHHhHHHHHHhhhhhhhccc------ccchHHHHHHHHHHHHHHHHHHhcCc
Q 007612 196 AFFSYFY-LALNLGSLFSNTILGYFEDE------GMWALGFWVSTGSAFAALVLFLAGTT 248 (596)
Q Consensus 196 ~~~~~~~-~~~~lg~~~~~~i~g~l~~~------~~~~~~f~~~~~~~~~~~~~~~~~~~ 248 (596)
+++++.+ ....+|..+||.++|++.+. +||+.+|.+.++..++..++.++..+
T Consensus 344 ~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 344 SAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999987 57789999999999999876 46999998877665555544444433
No 130
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.39 E-value=9.8e-12 Score=132.76 Aligned_cols=171 Identities=13% Similarity=-0.004 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGL 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~ 122 (596)
.+......++....++.+..++|.|+.+ .|++..+.+...+...++..++.++.|+++||+ |||+.+.++.+...++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 299 (406)
T PRK11551 222 TLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASL 299 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 3344444455556677778888988865 799999999999999999999999999999997 99999888766655555
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFY 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (596)
+++.+. + +...+++..++.|++.++..+...++..|.+|++. |+++.++.+
T Consensus 300 ~~~~~~---~--------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~ 350 (406)
T PRK11551 300 AALAAA---P--------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAV 350 (406)
T ss_pred HHHHhc---C--------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHH
Confidence 544443 1 24445566667788777778888999999999998 999999999
Q ss_pred HHHhHHHHHHhhhhhhhcccc-cchHHHHHHHHHHHHHHHHHH
Q 007612 203 LALNLGSLFSNTILGYFEDEG-MWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 203 ~~~~lg~~~~~~i~g~l~~~~-~~~~~f~~~~~~~~~~~~~~~ 244 (596)
....+|..++|.++|++.++. +|...++......+++.++.+
T Consensus 351 ~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 351 AVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998764 455555555544444444443
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=1.6e-11 Score=127.13 Aligned_cols=173 Identities=24% Similarity=0.305 Sum_probs=149.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchH-HHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFK-TCAIFQGIFV 119 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~-~l~~~~~~~~ 119 (596)
|.++...+..++..........+.+.++.+.+|.++.+.++..+...++..++.++.|+++||+ |||+ .+.++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 4445555666677777777888888898887899999999999999999999999999999997 9999 9999988888
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
++.+.+... ++....++..++.|++.+...+...+++.|.+|+++ |++.++
T Consensus 254 i~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 304 (352)
T cd06174 254 LGLLLLALA-----------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASG 304 (352)
T ss_pred HHHHHHHHh-----------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHH
Confidence 888877765 226677888899999999999999999999999988 999999
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHH
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLF 243 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~ 243 (596)
+.+...++|..++|.+.+.+.+..+|+..|++..+..+++.+..
T Consensus 305 ~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 305 LFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988999999998887766665543
No 132
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=1.6e-11 Score=129.21 Aligned_cols=158 Identities=13% Similarity=0.083 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhcccccc
Q 007612 56 AFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIR 135 (596)
Q Consensus 56 ~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 135 (596)
.......+++.|+.+++|.++.+.+++.+.......++.+++|+++||+ |||+.+.++.++..+....+...
T Consensus 214 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~------- 285 (375)
T TIGR00899 214 CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAAD------- 285 (375)
T ss_pred HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHH-------
Confidence 3444556788899889999999999888887777788889999999997 99999888766555444433333
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhh
Q 007612 136 PRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTI 215 (596)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i 215 (596)
++.+.+++.+++.|++.+...+....+..|..|+ + +++++++++...++|..++|.+
T Consensus 286 ----------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~~g~~~ 342 (375)
T TIGR00899 286 ----------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGRVGWIIAGSV 342 (375)
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHHHHHHHHHHH
Confidence 2255566677788888888788888888888875 4 5688999999999999999999
Q ss_pred hhhhcccccchHHHHHHHHHHHHHHHHHH
Q 007612 216 LGYFEDEGMWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 216 ~g~l~~~~~~~~~f~~~~~~~~~~~~~~~ 244 (596)
.|++.+..||+..|++.++..+++.++..
T Consensus 343 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 343 GGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 99999988999999988777666655543
No 133
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.39 E-value=5.9e-12 Score=136.71 Aligned_cols=178 Identities=16% Similarity=0.103 Sum_probs=124.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhcc-CchHHH-HHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYW-GRFKTC-AIFQGI 117 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~-Gr~~~l-~~~~~~ 117 (596)
.+.+|..++..++.....+++..++|.|++++.|++..++++....+.++..++.+++|+++||+. |||+.. ++...+
T Consensus 252 ~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l 331 (452)
T PRK11273 252 NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTL 331 (452)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHH
Confidence 356777788888888888888999999999989999999999988888999999999999999961 334332 222223
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
..++.+.+.+. +. .+....++..++.|.+..........+..|.+|++. |+++
T Consensus 332 ~~~~~~~~~~~---~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~ 384 (452)
T PRK11273 332 VTIATIVYWLN---PA------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTA 384 (452)
T ss_pred HHHHHHHHHHh---cc------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhH
Confidence 33333322221 11 113333344444444433322334456679999988 9999
Q ss_pred HHHHHHHHhHHHHH-HhhhhhhhcccccchHHHHHHHHHHHHHHHHHH
Q 007612 198 FSYFYLALNLGSLF-SNTILGYFEDEGMWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 198 ~~~~~~~~~lg~~~-~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~ 244 (596)
+|+.+...++|+.+ +|.+.|++.+..||+..|++..+..+++++...
T Consensus 385 ~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 385 AGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 99999888888655 799999999999999999887766555544443
No 134
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.39 E-value=1.1e-11 Score=133.81 Aligned_cols=178 Identities=19% Similarity=0.086 Sum_probs=123.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccC--chHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWG--RFKTCAIFQGIF 118 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~G--r~~~l~~~~~~~ 118 (596)
+.+|.+.+..++....++++..++|.|+.+++|++..+++...+.+.++..++.+++|+++||+.+ |++......+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI 322 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH
Confidence 456777777777777778888999999988899999999999999999999999999999999622 223222221111
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.+....+... +. .+.....+..+..|++............+|.+|++. |+++.
T Consensus 323 ~~~~~~~~~~---~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 375 (434)
T PRK11663 323 LLSVGSLWLM---PF------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAAT 375 (434)
T ss_pred HHHHHHHHHc---cc------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHH
Confidence 1121111111 11 112222233333443322222233456688888888 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
++.+...++|..++|.+.|++.+..||+..|++.+++.+++.+..+.
T Consensus 376 g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 376 GFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998887776665554443
No 135
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.37 E-value=3.6e-11 Score=128.14 Aligned_cols=178 Identities=10% Similarity=0.009 Sum_probs=137.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+..+.+.+..++....++++..++|.|+.+ +|.+..+++...+.+.++..++.++.|+++||+ |||+.++++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 345666666677778888999999999976 799999999999999999999999999999996 999999888777666
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCC-ccccccccchhhHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYD-EEDAKEGHSKVAFFS 199 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~ 199 (596)
+..++... +. +...+ ..++.|++.+...|.......+.++ ++. |++.++
T Consensus 283 ~~~~~~~~---~~-------------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~~~g 332 (393)
T PRK09705 283 GFCGFIWL---PL-------------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAI------AGKLVA 332 (393)
T ss_pred HHHHHHHc---cc-------------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHH------HHHHHH
Confidence 66554432 11 11112 1245677888888887777778875 455 899999
Q ss_pred HHHHHHhHHHHHHhhhhhhhccccc-chHHHHHHHHHHHHHHHHHHhcCcce
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGM-WALGFWVSTGSAFAALVLFLAGTTRY 250 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~~ 250 (596)
+.+...++++.++|.+.|++.+..| |...|++.++..++...+.....++.
T Consensus 333 ~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 333 FMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999998765 78888887766666655555555443
No 136
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.36 E-value=1.9e-11 Score=138.38 Aligned_cols=135 Identities=15% Similarity=0.067 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHH
Q 007612 81 NNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLS 160 (596)
Q Consensus 81 ~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 160 (596)
....+..++..++.+++|+++||+ |||++++++.++.+++.++++++ ++ ...+++.
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~---~s--------------------~~~ll~~ 654 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFG---NS--------------------ESAMIAL 654 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH---cc--------------------HHHHHHH
Confidence 334556688889999999999997 99999999998888888877776 22 4445666
Q ss_pred HHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHH
Q 007612 161 IYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAAL 240 (596)
Q Consensus 161 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~ 240 (596)
+++.+++.++..+...++++|++|++. |++++|+.+...++|+++||++++++.+. +...+|++.++..+++.
T Consensus 655 ~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ 727 (742)
T TIGR01299 655 LCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGG 727 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHH
Confidence 777777777788889999999999999 99999999999999999999999988664 45667777766655555
Q ss_pred HHHHhc
Q 007612 241 VLFLAG 246 (596)
Q Consensus 241 ~~~~~~ 246 (596)
++.+..
T Consensus 728 ll~~~L 733 (742)
T TIGR01299 728 LLALKL 733 (742)
T ss_pred HHHHhC
Confidence 544443
No 137
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.36 E-value=1.9e-11 Score=130.41 Aligned_cols=166 Identities=13% Similarity=0.050 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCChH---HHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhh
Q 007612 53 ATLAFFGVGVNLVLFLTRVLQQNNA---EAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSS 129 (596)
Q Consensus 53 ~~~~~~~~~~~l~~yl~~~lg~~~~---~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~ 129 (596)
.......+.++++.|+.+..+.... ..+.+.+...++..++.++.|+++||+ |||+.+.++..+..++.+.+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~- 308 (408)
T PRK09874 231 IQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFV- 308 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHh-
Confidence 3344445567778887765443221 234555666777888899999999997 99999998887777666655544
Q ss_pred ccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHH
Q 007612 130 YLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGS 209 (596)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 209 (596)
.+.+.+++.+++.|++.+...|...+++.+..|++. |++.+++++...++|.
T Consensus 309 ----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~ 360 (408)
T PRK09874 309 ----------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRDIGN 360 (408)
T ss_pred ----------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHHHHH
Confidence 125667778889999999999999999999888888 8999999999999999
Q ss_pred HHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCc
Q 007612 210 LFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTT 248 (596)
Q Consensus 210 ~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 248 (596)
.+||.++|++.+..||+..|++.+++.+++.+..+...+
T Consensus 361 ~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 361 VTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888777666655544333
No 138
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.36 E-value=7.2e-12 Score=134.65 Aligned_cols=163 Identities=10% Similarity=0.066 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHHHHHHhh---CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhh
Q 007612 53 ATLAFFGVGVNLVLFLTRVL---QQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSS 129 (596)
Q Consensus 53 ~~~~~~~~~~~l~~yl~~~l---g~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~ 129 (596)
....+.....+++.|+.+.+ +.+..+.+.+.+...++..++.+++|+++||+ |||+.+.++.++..++.++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~- 312 (420)
T PRK09528 235 VACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFA- 312 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhc-
Confidence 33334444456777776543 56667788999999999999999999999997 99999998888888887777765
Q ss_pred ccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH-HHHHHhHH
Q 007612 130 YLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY-FYLALNLG 208 (596)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~lg 208 (596)
+ +.+.+++.+++.+++.+...+....++.+.+|++. |++..+. ++...++|
T Consensus 313 --~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg 364 (420)
T PRK09528 313 --T--------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLG 364 (420)
T ss_pred --c--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHH
Confidence 2 26667778888888888877788888999999887 7777665 67788999
Q ss_pred HHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 209 SLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 209 ~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
.+++|.+.|++.+..||+..|.+.++..++..++.+.
T Consensus 365 ~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 365 AVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999877665555444433
No 139
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.36 E-value=4.1e-11 Score=127.13 Aligned_cols=169 Identities=11% Similarity=-0.089 Sum_probs=142.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.++..+...++.........++.+.|+++ +|.++.+.+.+.+...++..++.++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 556666677777777777888899999965 899999999999998999999999999999997 999999999999999
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
...+++++ ++.+.+++...+.|++.|...+....++.+. |+++ |+++.++
T Consensus 283 ~~~~~~~~-----------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~ 332 (382)
T TIGR00902 283 RWAIIGAI-----------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQAL 332 (382)
T ss_pred HHHHHHhH-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHH
Confidence 88887766 3377788889999999999999999999988 8777 8899999
Q ss_pred HH-HHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHH
Q 007612 201 FY-LALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVL 242 (596)
Q Consensus 201 ~~-~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~ 242 (596)
++ ....+|..++|.++|++.++.|+ ..|++.+++.++++++
T Consensus 333 ~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 333 YNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 76 46789999999999999999886 5676666665555443
No 140
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.35 E-value=3.4e-11 Score=128.71 Aligned_cols=177 Identities=16% Similarity=0.102 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHH-HHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCA-IFQGIFV 119 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~-~~~~~~~ 119 (596)
|.++...+..++....+++..+++|.|++ ++|++..+.+.+.+...++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 45666777777888888999999999885 5899999999999999999999999999999997 9888764 3333333
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
++.+.+.+..... .++....++..++.|++.+...+ ......+.. +++ |++++|
T Consensus 300 ~~~~~l~~~~~~~------------------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~------~g~~~g 353 (402)
T TIGR00897 300 IFTLALYYIPQHF------------------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKH------KGAAMS 353 (402)
T ss_pred HHHHHHHHHHHcc------------------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cch------hHHHHH
Confidence 3333332220000 02245556667777777776544 345556654 456 999999
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
+.+...++|..++|.++|++.+..||...|++.+++.+++.++..+
T Consensus 354 ~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 354 VLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888776666555443
No 141
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.33 E-value=2.1e-11 Score=129.60 Aligned_cols=160 Identities=15% Similarity=0.067 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGL 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~ 122 (596)
+........+.+...+.+..+++.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 318 (405)
T TIGR00891 240 FVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLI 318 (405)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHH
Confidence 33344444445555566778889999999999999999999999999999999999999997 99999888776543332
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFY 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (596)
...... . .+...+.++.++.+++.+...+..++++.|.+|++. |++++|+.+
T Consensus 319 ~~~~~~-~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~ 370 (405)
T TIGR00891 319 IPVFAI-G---------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTY 370 (405)
T ss_pred HHHHHh-C---------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHH
Confidence 222111 0 124455555566666666777888899999999998 999999999
Q ss_pred HHHhHHHHHHhhhhhhhccccc-chHHHHH
Q 007612 203 LALNLGSLFSNTILGYFEDEGM-WALGFWV 231 (596)
Q Consensus 203 ~~~~lg~~~~~~i~g~l~~~~~-~~~~f~~ 231 (596)
...++|+.++|.+.|++.+..| |+..+..
T Consensus 371 ~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 371 QLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999999999888 8766654
No 142
>PRK03545 putative arabinose transporter; Provisional
Probab=99.32 E-value=1.1e-10 Score=124.27 Aligned_cols=174 Identities=14% Similarity=-0.034 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGL 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~ 122 (596)
++..+...++.....+....+++.|+.+..|.+..+.+++.+...++..++.++.|+++||+ |||+.+ ++..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 34444444555555666667888898888999999999999999999999999999999997 887654 4444433433
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFY 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (596)
.++... + .+...+++..++.|++.+...+...+.+.+..| +. |++++++++
T Consensus 285 ~~l~~~---~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~ 335 (390)
T PRK03545 285 LLLLPA---A-------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMALFS 335 (390)
T ss_pred HHHHHH---h-------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHHHH
Confidence 332221 0 225566667778888887777777788888765 46 889999999
Q ss_pred HHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcC
Q 007612 203 LALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 203 ~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
...++|..+||.++|++.+..|++..|++.+.+.+++++..+...
T Consensus 336 ~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 336 GIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 899999999999999999999999999988877777666554433
No 143
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.32 E-value=2.9e-11 Score=129.78 Aligned_cols=162 Identities=14% Similarity=-0.088 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccC
Q 007612 57 FFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRP 136 (596)
Q Consensus 57 ~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (596)
..++..++|.|+++.+|.++.+.+++.+...++..++.++.|+++||. ++++.+.++.++..++.+++.+. +
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~---~---- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM---P---- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc---c----
Confidence 345667889999888999999999999999999999999999999995 88888888877777776666544 2
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhh
Q 007612 137 RGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTIL 216 (596)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~ 216 (596)
+.....++.++.|++.+...+...+++.+.+|++. |++++++++...++|..+||.+.
T Consensus 311 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~ 368 (417)
T PRK10489 311 ----------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALL 368 (417)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHH
Confidence 25556667778888888777777889999999988 99999999999999999999999
Q ss_pred hhhcccccchHHHHHHHHHHHHHHHHHHhcCc
Q 007612 217 GYFEDEGMWALGFWVSTGSAFAALVLFLAGTT 248 (596)
Q Consensus 217 g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 248 (596)
|++.+..|++..+++.++..++..++.....+
T Consensus 369 G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 369 GGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 99999889888887766554444444433333
No 144
>PRK12382 putative transporter; Provisional
Probab=99.31 E-value=4.3e-11 Score=127.27 Aligned_cols=162 Identities=13% Similarity=0.163 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhc
Q 007612 51 GLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSY 130 (596)
Q Consensus 51 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~ 130 (596)
+.....+..+..+++.|+++ .|++. .+...+.+.++..++.++.|++.||+ |+||.+.++..+..++.+++.+.
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~-- 299 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA-- 299 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc--
Confidence 33445555666778888764 46653 45566667777888999999999997 99999998888888877766554
Q ss_pred cccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHH
Q 007612 131 LFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSL 210 (596)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 210 (596)
+ +....+++.++.|++.+...+...+.+.+.+|+++ |++++++++...++|..
T Consensus 300 -~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ 352 (392)
T PRK12382 300 -P--------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYG 352 (392)
T ss_pred -c--------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHH
Confidence 2 25566777888899988888888889999999888 99999999999999999
Q ss_pred HHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 211 FSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 211 ~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
++|.+.|++.++.||+..|.+.++..+++.+..+.
T Consensus 353 ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 353 VSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999888777666655543
No 145
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.31 E-value=9.7e-11 Score=128.59 Aligned_cols=149 Identities=15% Similarity=0.072 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 007612 59 GVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRG 138 (596)
Q Consensus 59 ~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (596)
.+..++|.|+++++|++..+.+++.+...++..++.+++|+++||+ |||+++.++..+..++.+++... +.
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~---~~----- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAI---GG----- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhc---cc-----
Confidence 4567899999889999999999999999999999999999999997 99999888776655554433322 11
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhh
Q 007612 139 CGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGY 218 (596)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~ 218 (596)
.+.....+..++.+....+..+..++++.|.+|++. |++.+++++...++|+.+||.++|+
T Consensus 364 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~ 424 (496)
T PRK03893 364 -------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGAL 424 (496)
T ss_pred -------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHH
Confidence 123333344444433333345677788999999988 9999999999999999999999999
Q ss_pred hcccccchHHHHHHHHH
Q 007612 219 FEDEGMWALGFWVSTGS 235 (596)
Q Consensus 219 l~~~~~~~~~f~~~~~~ 235 (596)
+.+..||+..+.+....
T Consensus 425 l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 425 IAQRLDLGTALASLSFS 441 (496)
T ss_pred HhccCChHHHHHHHHHH
Confidence 99999999887655433
No 146
>PRK15075 citrate-proton symporter; Provisional
Probab=99.31 E-value=4.4e-11 Score=129.16 Aligned_cols=159 Identities=18% Similarity=0.118 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.....+...++....++.+..++|.|+++.+|++..+.++......++..++.+++|+++||+ |||+.++++..+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~ 316 (434)
T PRK15075 238 RIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAIL 316 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHH
Confidence 3333334445556677888889999999988999999999888888899999999999999997 999988776544332
Q ss_pred HHH-HHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 121 GLV-LLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 121 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
... ....... . .+.....+..++.+++.+...+....+..|.+|++. |+++++
T Consensus 317 ~~~~~~~~~~~--~------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g 370 (434)
T PRK15075 317 TAYPALSWLVA--A------------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFS 370 (434)
T ss_pred HHHHHHHHHHc--C------------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchhee
Confidence 221 1111101 0 112233333445556666666777788999999998 999999
Q ss_pred HH-HHHHhHHHHHHhhhhhhhcccccch
Q 007612 200 YF-YLALNLGSLFSNTILGYFEDEGMWA 226 (596)
Q Consensus 200 ~~-~~~~~lg~~~~~~i~g~l~~~~~~~ 226 (596)
+. +.+..+++.++|.+.|++.+..|+.
T Consensus 371 ~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 371 LAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 85 4444456788999999999887854
No 147
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.31 E-value=1.1e-11 Score=110.34 Aligned_cols=133 Identities=21% Similarity=0.292 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 007612 83 VSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIY 162 (596)
Q Consensus 83 ~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 162 (596)
.+.+.++..++.++.|+++||+ |||+.+.++..+..++.+++... .+.+.+.+.++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 59 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALS-----------------------SNITVLIIARF 59 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHh-----------------------ccHHHHHHHHH
Confidence 3455677888999999999997 99999999988888887777665 22667788899
Q ss_pred HHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHH
Q 007612 163 FVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVL 242 (596)
Q Consensus 163 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~ 242 (596)
+.|++.+...+...+++.|.+|+++ |++..++.+...++|..++|.+.+++.+..+|++.|++.....++..+.
T Consensus 60 ~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 60 LQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFIL 133 (141)
T ss_pred HHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 9999999999999999999999999998889999988877665555544
Q ss_pred HHh
Q 007612 243 FLA 245 (596)
Q Consensus 243 ~~~ 245 (596)
...
T Consensus 134 ~~~ 136 (141)
T TIGR00880 134 LAF 136 (141)
T ss_pred Hhh
Confidence 443
No 148
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.31 E-value=8.1e-11 Score=127.03 Aligned_cols=178 Identities=15% Similarity=0.103 Sum_probs=114.8
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 42 AGIIILLN-QGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 42 ~~~~~~~~-~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
..+..+.. .++....+|++..++|.|+.+.+|.+..+.+...+...++..++.++.|+++||+ |||+.++++.++..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 321 (432)
T PRK10406 243 RAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAAL 321 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 33433333 3344778889999999999988999999988888888888888899999999997 999988776554433
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
..+....... .. .+....+....+..++.+...+....+..|.+|++. |++++|+
T Consensus 322 ~~~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~ 376 (432)
T PRK10406 322 FTVPILSALQ-NV------------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGL 376 (432)
T ss_pred HHHHHHHHHH-cC------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhH
Confidence 3322221100 00 012222222222223333444566788899999999 9999999
Q ss_pred HHHHHh-HHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 201 FYLALN-LGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 201 ~~~~~~-lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
.+...+ +++..+|.+.+++.....|...+++.++..+++.+..++
T Consensus 377 ~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 377 SYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 665544 445568888886644333655666655555555554444
No 149
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.29 E-value=1.1e-10 Score=123.68 Aligned_cols=156 Identities=13% Similarity=0.174 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccc
Q 007612 55 LAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLI 134 (596)
Q Consensus 55 ~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~ 134 (596)
..+.....++|.|+++ .|.++.+.+...+...++..++.++.|+++||+ |+|+.+.++..+..++..... .
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~------ 284 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S------ 284 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h------
Confidence 3344455678888865 699999999999999999999999999999997 999998888777666554332 1
Q ss_pred cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhh
Q 007612 135 RPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNT 214 (596)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~ 214 (596)
........++.|++.+...|...+.+.|..|+++ ++...+.++...++|..+||.
T Consensus 285 -------------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp~ 339 (381)
T PRK03633 285 -------------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGPS 339 (381)
T ss_pred -------------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 1122345566677666778999999999998877 777788888889999999999
Q ss_pred hhhhhcccccchHHHHHHHHHHHHHHHHHH
Q 007612 215 ILGYFEDEGMWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 215 i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~ 244 (596)
++|++.++++|++.|.+.+...++..+..+
T Consensus 340 ~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 340 FTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987766655544433
No 150
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.29 E-value=3.8e-11 Score=129.81 Aligned_cols=179 Identities=15% Similarity=0.046 Sum_probs=123.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.+|...+..++.....+++..++|.|+++..|+++.++++..+...++..++.+++|+++||+ |+++....+.....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHH
Confidence 4567777777777777888999999999988999999999999999999999999999999996 654432233222221
Q ss_pred H---HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 121 G---LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 121 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
. ...+... +. .+.....+..++.|++..+..........|.+|++. |+++
T Consensus 330 ~~~~~~~~~~~---~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 382 (438)
T TIGR00712 330 VTIAVIVYWMN---PA------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTA 382 (438)
T ss_pred HHHHHHHHHhc---CC------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeee
Confidence 1 1111111 10 112323333344444433222222346678899888 9999
Q ss_pred HHHHHHHHhHHH-HHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcC
Q 007612 198 FSYFYLALNLGS-LFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 198 ~~~~~~~~~lg~-~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
.|+.+...++|+ .++|.+.|++.+..||...|++..+..+++.+..++..
T Consensus 383 ~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
T TIGR00712 383 AGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 433 (438)
T ss_pred hhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 999988888875 68999999999989999999887766655555544433
No 151
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.27 E-value=4.5e-11 Score=125.42 Aligned_cols=162 Identities=15% Similarity=0.124 Sum_probs=120.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH--HH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG--IF 118 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~--~~ 118 (596)
+.++.+.+..++.....+.+..+++.|+.+.+|++..+.+...+...++..++.++.|+++||+.+||+..+.... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 4667777777788888888889999999999999999999999999999999999999999985234443322211 11
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.++....... +. .+.....+..++.|+......+....+..|.+|++. |+++.
T Consensus 296 ~~~~~~~~~~---~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 348 (379)
T TIGR00881 296 IVSLLVYWLN---PA------------------ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAA 348 (379)
T ss_pred HHHHHHHhcC---cc------------------hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHH
Confidence 1222211111 11 123444455566666555556666788899999998 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccccchHHH
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGMWALGF 229 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f 229 (596)
++++...++|..++|.+.|.+.+..||++.|
T Consensus 349 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 349 GFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 9999999999999999999999999998754
No 152
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.27 E-value=2.3e-10 Score=118.74 Aligned_cols=179 Identities=18% Similarity=0.134 Sum_probs=146.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.++..+...++...+.|+..+|+.+++++..|+|....+++...+.++..++.+++|+++|| +.|+.+.....+.++
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 467778888888889999999999999999999999999999999999999999999999999 788888888777777
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
..+.+.+.. .+.+..++..++.|+..+........-+++. -++. +..+.++
T Consensus 289 ~~l~l~~~~----------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~-~p~~------~~~a~sl 339 (394)
T COG2814 289 ALLALTFTG----------------------ASPALALALLFLWGFAFSPALQGLQTRLARL-APDA------ADLAGSL 339 (394)
T ss_pred HHHHHHHhc----------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhccc-CCCc------hHHHHHH
Confidence 776666551 2355566666667777666555555555552 2445 7799999
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcce
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRY 250 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 250 (596)
+....|+|..+|..++|.+.+++|+....++.++..++++++.+...++.
T Consensus 340 ~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 340 NVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999988888887776655543
No 153
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.27 E-value=1e-10 Score=113.19 Aligned_cols=172 Identities=19% Similarity=0.167 Sum_probs=134.6
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHH
Q 007612 31 PAIRAKSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKT 110 (596)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~ 110 (596)
|...-.+.....+|.+.++.++..+.-+=+...-+.++++++|+|+.+++.+.+.......+.+++.|.++||+ |++-.
T Consensus 254 pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~ 332 (459)
T KOG4686|consen 254 PKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLW 332 (459)
T ss_pred cccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceeh
Confidence 33333445556777777777776666555556667899999999999999999999999999999999999998 99887
Q ss_pred HHHHHH-HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccc
Q 007612 111 CAIFQG-IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAK 189 (596)
Q Consensus 111 l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 189 (596)
.+.+.. ...++...+.+. ...-+++..+.|+......-+.++.++...|+++
T Consensus 333 wv~~a~~~tl~~H~~l~Ft-------------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q-- 385 (459)
T KOG4686|consen 333 WVASACILTLLGHSGLFFT-------------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ-- 385 (459)
T ss_pred hHHHHHHHHHHHhhhHHhh-------------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH--
Confidence 766544 555566666655 3335566778888888887778999999999999
Q ss_pred cccchhhHHHHHHHHHhHHHHHHhhhhhhhccccc---chHHHHHHHH
Q 007612 190 EGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGM---WALGFWVSTG 234 (596)
Q Consensus 190 ~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~---~~~~f~~~~~ 234 (596)
.|++++..+...|+|-.+.|+++|.+.+.-| |--+|++...
T Consensus 386 ----LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 386 ----LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred ----hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999987644 4445554443
No 154
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.26 E-value=2.7e-10 Score=123.44 Aligned_cols=185 Identities=15% Similarity=0.073 Sum_probs=152.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCch--HHHHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRF--KTCAIFQG 116 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~--~~l~~~~~ 116 (596)
+.|.+...+++.++.+-+...+......|.++++|++..+...+.....+...+++++.|++.||+ |.| ++++++++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 456777888888988888899999999999999999999999999999999999999999999997 988 88888776
Q ss_pred HHHHHHHHHHh--hhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccch
Q 007612 117 IFVIGLVLLSL--SSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSK 194 (596)
Q Consensus 117 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 194 (596)
+..+..+...+ . ++ ....++.+.+++.-++.|+..|..++..-+++++..|+++ .
T Consensus 358 ~~~~i~~~g~~G~~---~~--------------~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e 414 (477)
T PF11700_consen 358 LWIIIPLYGLFGFW---PS--------------FFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------E 414 (477)
T ss_pred HHHHHHHHHHHHhh---hc--------------ccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------h
Confidence 65443332222 1 11 0011346668888889999999999999999999999999 8
Q ss_pred hhHHHHHHHHHhHHHHHHhhhhhhhccccc-chHHHHHHHHHHHHHHHHHHhcC
Q 007612 195 VAFFSYFYLALNLGSLFSNTILGYFEDEGM-WALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 195 ~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
+..||++....-..+.+||.+.|.+.+.+| .|+.+....+..+++++++....
T Consensus 415 ~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 415 AEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999988776 88888877777777776665543
No 155
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.24 E-value=2.3e-10 Score=125.42 Aligned_cols=177 Identities=17% Similarity=0.136 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHH-HHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 007612 44 IIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVS-KWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGL 122 (596)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~-~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~ 122 (596)
+......++.....+....+.++|+.+++|++..+.++... ...++..++.+++|+++||+ |+||.++++.++.+++.
T Consensus 225 ~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 225 WLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 33333344555555566677888988889999999999875 55678999999999999997 99998877665544443
Q ss_pred HHHHh-hhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 123 VLLSL-SSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
+.+.. +.. + .+...+.+..++..++.|...+...++..+..+++. +++.+++.
T Consensus 304 l~~~~l~~~-~-------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~ 357 (491)
T PRK11010 304 AGYWLLSIT-D-------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALL 357 (491)
T ss_pred HHHHHHHhc-c-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHH
Confidence 33221 111 0 123334444555555555555667888889998888 88899999
Q ss_pred HHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcC
Q 007612 202 YLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
+...++|..+++.+.|++.+..||+..|.+..++.+.++++....+
T Consensus 358 ~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 358 SALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888999999999999999888877777666555443
No 156
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.24 E-value=1.4e-10 Score=119.22 Aligned_cols=187 Identities=17% Similarity=0.060 Sum_probs=143.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIF 118 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~ 118 (596)
+.+..|.++..++...-++-++-.+++.|+++++|.++.+++.....+.+...+..+++|+|+||+ |.+|++++....+
T Consensus 216 ~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~ 294 (417)
T COG2223 216 SNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGM 294 (417)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHH
Confidence 346789999999999999999999999999999999999999999999999999999999999997 8888888887777
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
+++..++.+..+.. .+..+....+.....+++..|.-...+..++..++|++ -+...
T Consensus 295 ~~~~~~l~~~~~~~----------------~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~ 351 (417)
T COG2223 295 ALAAALLSLFLTGF----------------GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVT 351 (417)
T ss_pred HHHHHHHHcccccc----------------ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHH
Confidence 77777777652100 00122333333333344444444455567777777653 56888
Q ss_pred HHHHHHHhHHHHHHhhhhhhhccccc-chHHHHHHHHHHHHHHHHHHhcCcc
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGM-WALGFWVSTGSAFAALVLFLAGTTR 249 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~ 249 (596)
++.....++|+..-|...|...+.+| +...|++.....+++..+.+....|
T Consensus 352 G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 352 GIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998888777 8889998888777777666554443
No 157
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.23 E-value=1.9e-09 Score=111.14 Aligned_cols=107 Identities=14% Similarity=0.041 Sum_probs=78.4
Q ss_pred HHHHHHHHHHhhCC---Ch----HHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhcccc
Q 007612 61 GVNLVLFLTRVLQQ---NN----AEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFL 133 (596)
Q Consensus 61 ~~~l~~yl~~~lg~---~~----~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~ 133 (596)
..++|+|+++..+. ++ +-.+...++..+...+.+|+-|.++|...-|||.+-+...+.+++...+.++ |+
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i---~~ 111 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFI---PP 111 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHh---CC
Confidence 45678899887665 43 3346667777888888999999999997335556666666777777777776 22
Q ss_pred ccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccc
Q 007612 134 IRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEED 187 (596)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 187 (596)
..+....++...+..++..+......+++.|..++++
T Consensus 112 -----------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~ 148 (438)
T COG2270 112 -----------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN 148 (438)
T ss_pred -----------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc
Confidence 1235556666667788888888999999999998877
No 158
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.23 E-value=6.6e-10 Score=114.35 Aligned_cols=80 Identities=13% Similarity=0.015 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc---------
Q 007612 152 LEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE--------- 222 (596)
Q Consensus 152 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~--------- 222 (596)
.++..++++.++.|.|.+..+++.++++++..|+++ +.+.+++.+....+|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 458889999999999999999999999999999888 88999999999999999999999977631
Q ss_pred -------ccchHHHHHHHHHHH
Q 007612 223 -------GMWALGFWVSTGSAF 237 (596)
Q Consensus 223 -------~~~~~~f~~~~~~~~ 237 (596)
..|+++|++.++..+
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~ 103 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALA 103 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHH
Confidence 368888875554433
No 159
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.22 E-value=2.5e-10 Score=124.03 Aligned_cols=171 Identities=13% Similarity=0.019 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhc-cCchHHHHHHH--HH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSY-WGRFKTCAIFQ--GI 117 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~-~Gr~~~l~~~~--~~ 117 (596)
+.++..++..++....++....+++.|+++ +|++..+++.+.+...++..++.+++|+++||. .++|+...++. +.
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 456667777777778888888899999864 799999999999999999999999999999983 13344333332 22
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
..++.+++.+. .+.+.+++.+++.|++.+...+...+++.|.+|+++ +++.
T Consensus 320 ~~l~~ll~~~~-----------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~ 370 (455)
T TIGR00892 320 NGLTHLLCALA-----------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSA 370 (455)
T ss_pred HHHHHHHHHHh-----------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhH
Confidence 23333333333 236667788899999999999999999999999988 9999
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcccc-cchHHHHHHHHHHHHHHH
Q 007612 198 FSYFYLALNLGSLFSNTILGYFEDEG-MWALGFWVSTGSAFAALV 241 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~~~-~~~~~f~~~~~~~~~~~~ 241 (596)
+++++...++|..+||.++|++.+.. +|++.|++.++..+++.+
T Consensus 371 ~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 371 VGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999999999999999998876 599999988766555544
No 160
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.22 E-value=7.7e-09 Score=111.35 Aligned_cols=162 Identities=17% Similarity=0.100 Sum_probs=114.5
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhc--cC--chHHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 007612 63 NLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSY--WG--RFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRG 138 (596)
Q Consensus 63 ~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~--~G--r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (596)
....|+++++|+++++.....+...+-. ..-++.|.++|-+ .| ||+-++++.++.+++...++.. +.
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~---~~----- 81 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL---PA----- 81 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc---cc-----
Confidence 3456789999999999877666555543 4567789999985 23 4445566666665555555543 11
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhh
Q 007612 139 CGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGY 218 (596)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~ 218 (596)
...+.....+..++..+|....-..+-+++.|....+... |+...+..+....+|++++..+.|.
T Consensus 82 -----------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l~G~ 146 (433)
T PF03092_consen 82 -----------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLLSGP 146 (433)
T ss_pred -----------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 0122444555667778888888889999999987655422 7788888888999999999999999
Q ss_pred hcccccchHHHHHHHHHHHHHHHHHHhcCc
Q 007612 219 FEDEGMWALGFWVSTGSAFAALVLFLAGTT 248 (596)
Q Consensus 219 l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 248 (596)
+.+..+++..|.+..+..++..+..+...+
T Consensus 147 l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 147 LLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 999999999998887665555444444433
No 161
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.22 E-value=3.1e-10 Score=122.98 Aligned_cols=186 Identities=14% Similarity=0.037 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGL 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~ 122 (596)
++..++..+........+..+.+. +.+++|++..+.++......++..++.+++|+++||+ |||+.+.++.++..++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 286 FLGVVLQWFQQFTGINAIMYYSPT-IFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHhCCeehHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHH
Confidence 333333333333333344444444 4467899998888888889999999999999999997 99999999888777777
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFY 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (596)
+++.+...... .+.+...+...+....++.+....+..+....++.|.+|++. |+++.++.+
T Consensus 364 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~ 425 (481)
T TIGR00879 364 FVLGILGASFV------------TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAV 425 (481)
T ss_pred HHHHHHhhccc------------CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHH
Confidence 66663211000 000000122222222222222223345677778899999998 999999999
Q ss_pred HHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCc
Q 007612 203 LALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTT 248 (596)
Q Consensus 203 ~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 248 (596)
...++|++++|.+.+++.+..+|++.|++.+++.+++.++..+..+
T Consensus 426 ~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 426 AANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecc
Confidence 9999999999999999988889999998877776666655554444
No 162
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.21 E-value=2.1e-09 Score=115.37 Aligned_cols=359 Identities=15% Similarity=0.102 Sum_probs=207.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHH-HHHHHH----HHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 46 ILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEA-ANNVSK----WTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~-~~~~~~----~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
..+...+.....+........+.....+.+..+. +..... ..+...+.+++.|.++||+ |||..+.+......+
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHH
Confidence 3333444433334444555566655544433222 222222 2567788899999999997 999999999888888
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHH--HhccccccchhhhhhccCCccccccccchhhHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVA--LGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g--~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
..+.+.+. .+.+++ +.+ -+.+.......++++|....+. |...+
T Consensus 105 ~~~~~~~~-------------------------~~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R~~~~ 150 (463)
T KOG2816|consen 105 PALCLLFQ-------------------------GYWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE------RSSSI 150 (463)
T ss_pred hHHHHHHH-------------------------HHHHhh---hcccccchhhhhhhhhhheeeccchhH------HHHHH
Confidence 87777765 122222 322 3345667888899999999888 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceeccCCCCC-hhHHHHHHHHHHHHhhccc
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRHFKPSGN-PLARFCQVIVAATKKWRVH 277 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 277 (596)
++.+.....+..++|.+++++.+..|...+|++..+..++..+-.....++..+++.... ..
T Consensus 151 gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~----------------- 213 (463)
T KOG2816|consen 151 GLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATL----------------- 213 (463)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccc-----------------
Confidence 999999999999999999999999999999999988877777666655554333222110 00
Q ss_pred cCCCcccchhcccCCCCCCCCCccccccccchhhhhhhhccccccccccCCCCCCcccCccchhhhhhhhhhHHHHHHhH
Q 007612 278 LSAEGEDLYVIDANDSSTNGNRNMLHTHGFKFLDRAAYISSRDLDEQKQGCSNPWRLCPVTQVEEVKCILRLLPIWLCTI 357 (596)
Q Consensus 278 ~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (596)
....++....+ ...++++.... .+..|..+..... ...
T Consensus 214 ~~~~~~~~~~~--------------------------------------~~~~~~~~~~~--~~~~r~~l~l~l~--~~~ 251 (463)
T KOG2816|consen 214 RELTPGSLDSS--------------------------------------HVADAFQSLTK--VGPDRLLLLLLLV--AFL 251 (463)
T ss_pred cccCCCcccch--------------------------------------hhhhhhhhhcc--cCCCccchHHHHH--HHH
Confidence 00000000000 00011110000 1112222211111 111
Q ss_pred hHhhhhcccc---ceeEeeeccccccccccccCCccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHH
Q 007612 358 LYSVVFTQMA---SLFVEQGAAMKTTVSNFRIPPASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIG 434 (596)
Q Consensus 358 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig 434 (596)
.+.-...... .++.......+.+- +..-....+.......++..+... +..+ ..+.+..|
T Consensus 252 ~~~~~~~~~~~~~~~yl~~~f~w~~~~--~s~~~~~~~~~~~i~~l~~~~~l~-------~~l~--------~~~~i~lG 314 (463)
T KOG2816|consen 252 SSLPEAGGASDVLLLYLKAKFGWNKKE--FSDLLSLVSILGIISQLLLLPLLS-------SILG--------EKRLISLG 314 (463)
T ss_pred HHHHHhcCceeEEEEEEeeecCcCHHH--HHHHHHHHHHHHHHHHHHHHHHHH-------HHHh--------hhhHhhHH
Confidence 1111111111 12222111222110 000001111111222222222222 1122 23368889
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHH
Q 007612 435 LVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMT 514 (596)
Q Consensus 435 ~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~ 514 (596)
+....+...++++.+ .. |......+.........|...+++.....++.+|.++++...
T Consensus 315 l~~~~~~~~~~af~~--------------------~~-w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~ 373 (463)
T KOG2816|consen 315 LLSEFLQLLLFAFAT--------------------ET-WMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISG 373 (463)
T ss_pred HHHHHHHHHHHHHhc--------------------cc-hhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHH
Confidence 988888888888753 22 333344555555667789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccc
Q 007612 515 SISLGNYVSSLLLTMVMKISTE 536 (596)
Q Consensus 515 ~~~lg~~lg~~l~~~i~~~~~~ 536 (596)
...+.+.+++.+.+.+...+.+
T Consensus 374 i~~l~~~~~~~~~~~i~~~t~~ 395 (463)
T KOG2816|consen 374 IEGLSGVVSPALYGNIFALTLD 395 (463)
T ss_pred HHHHhhhhhHHHHHHHHHHHHH
Confidence 9999999999999988766644
No 163
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.21 E-value=3e-10 Score=123.79 Aligned_cols=179 Identities=15% Similarity=0.068 Sum_probs=123.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHH-------
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTC------- 111 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l------- 111 (596)
..+.+|...+..++....++.+.+++|.|+.+.+|.+..+.++..+...++..++.+++|+++||+ ++|+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~ 337 (465)
T TIGR00894 259 KSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARK 337 (465)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHH
Confidence 346788889999999999999999999999999999999999999999999999999999999996 544211
Q ss_pred -HHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCcccccc
Q 007612 112 -AIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKE 190 (596)
Q Consensus 112 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 190 (596)
..+......+..++..... . .+....++...+.+.+.++..+.......|..|. .
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~--- 393 (465)
T TIGR00894 338 IFNGIGGLGPGIFAYALPYL-S-------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F--- 393 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHc-C-------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H---
Confidence 1111111111111111100 0 1133333344444555555555555555566554 5
Q ss_pred ccchhhHHHHHHHHHhHHHHHHhhhhhhhccc---ccchHHHHHHHHHHHHHHHHHHh
Q 007612 191 GHSKVAFFSYFYLALNLGSLFSNTILGYFEDE---GMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 191 ~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~---~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
++...++.+...++|+.++|.+.|++.+. .+|..+|.+.++..+++.++...
T Consensus 394 ---~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 394 ---LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 88999999999999999999999998764 34888888877666666554433
No 164
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.20 E-value=3.7e-10 Score=120.36 Aligned_cols=171 Identities=12% Similarity=0.050 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVL---QQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIF 118 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~ 118 (596)
.++..+...++....+.....+.+.|+.+.+ +.+....+.+.+...+...++.+..|++.||+ |||+.+.++.++.
T Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~ 294 (396)
T TIGR00882 216 KFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIM 294 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHH
Confidence 3444444455555555555567788887765 55666778888888888899999999999997 9999999988877
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.++..+..++ + +.+.+++..++.|++.+........+..+..+++. +++..
T Consensus 295 ~l~~~~~~~~---~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~ 345 (396)
T TIGR00882 295 SVRIIGSSFA---T--------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIY 345 (396)
T ss_pred HHHHHHHHhc---C--------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEee
Confidence 7776665554 2 25556777888888866555555556666666666 66766
Q ss_pred HH-HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHH
Q 007612 199 SY-FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVL 242 (596)
Q Consensus 199 ~~-~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~ 242 (596)
+. ++....+|.+++|.++|++.+..||+.+|.+.++..++..++
T Consensus 346 ~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 346 LIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 66 677889999999999999999999999999877766555544
No 165
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.19 E-value=5.1e-10 Score=122.36 Aligned_cols=174 Identities=9% Similarity=-0.069 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchH-------HHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFK-------TCAIF 114 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~-------~l~~~ 114 (596)
..|.+.+..++.....+.+..++|.|+.+.+|++..+++.+.+...++..++.+++|+++||+ |||+ .+.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~ 331 (476)
T PLN00028 253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIV 331 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHH
Confidence 345555555555666667778899999888999999999999999999999999999999996 8652 22222
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccch
Q 007612 115 QGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSK 194 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 194 (596)
.++..+..+++... .+.....+..++.+++.+...+...+++.+..| +. |
T Consensus 332 ~~l~~i~~~~~~~~-----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------~ 381 (476)
T PLN00028 332 QTLGGVFCIWLGRA-----------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------L 381 (476)
T ss_pred HHHHHHHHHHhccc-----------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------c
Confidence 22222222222222 123334444455555544444555555555543 45 8
Q ss_pred hhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcC
Q 007612 195 VAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 195 ~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
++..++.+.+.++|+.++|.+.+ ..+..+|+..|++.+++.+++.++.++.+
T Consensus 382 g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 382 GVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 89999988877888888876654 22345799999988777766666655543
No 166
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.18 E-value=7.6e-10 Score=118.97 Aligned_cols=152 Identities=13% Similarity=-0.056 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhcc
Q 007612 52 LATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYL 131 (596)
Q Consensus 52 ~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~ 131 (596)
......+.+..++|.|+++ .|.++.+.+...+...++..++.++.|+++||+ |||+.+..+.++..+..+++...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~--- 316 (426)
T PRK12307 242 SIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRI--- 316 (426)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH---
Confidence 3333444567788888875 699999999999999999999999999999997 99999988877665554444332
Q ss_pred ccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHH
Q 007612 132 FLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLF 211 (596)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~ 211 (596)
+. .....+....+..+++..+..+..+.++.|.+|++. |++++|+.+...++|+.+
T Consensus 317 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~ 372 (426)
T PRK12307 317 PQ------------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTF 372 (426)
T ss_pred cc------------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHH
Confidence 11 112212122222223333445666788899999998 999999999999999999
Q ss_pred HhhhhhhhcccccchHHHHHH
Q 007612 212 SNTILGYFEDEGMWALGFWVS 232 (596)
Q Consensus 212 ~~~i~g~l~~~~~~~~~f~~~ 232 (596)
+|.+.|++.+..|+....++.
T Consensus 373 gp~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 373 NSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred HHHHHHHHHHcccHHHHHHHH
Confidence 999999999888876544433
No 167
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.17 E-value=1.6e-09 Score=115.76 Aligned_cols=169 Identities=14% Similarity=-0.053 Sum_probs=125.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.++...+..++....++....+.|.|+.+.+|+++.+.++......++..++.++.|+++||+ |+|+.+.++.++..+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 293 (406)
T PRK15402 215 RRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVA 293 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 3455555555555566666667788888888999999998888877788889999999999997 999999998887777
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+..++.+..... ..+...++++.++.|+|.+...+......... ++++ |++..+.
T Consensus 294 g~~~~~~~~~~~------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~~~~ 348 (406)
T PRK15402 294 GLLLAALATVIS------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTVSAA 348 (406)
T ss_pred HHHHHHHHHHcc------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHHHHH
Confidence 777766541100 12355566777888888887776666555433 3456 8999999
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHH
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGS 235 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~ 235 (596)
+++...+|..+|+.+.+++.+..++....+...+.
T Consensus 349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~ 383 (406)
T PRK15402 349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLAN 383 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHH
Confidence 99999999999999999998877766544444433
No 168
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.16 E-value=1.5e-09 Score=115.20 Aligned_cols=166 Identities=10% Similarity=-0.050 Sum_probs=128.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.++..++..++....+....++++.|+. +.|.+..+.+...+...++..+..++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 45555556566666666667778888985 5899999999999988888889999999999997 999999988888777
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+.+++... ++.+.+++..++.|++.+...+....++.+. ++++ +++..++
T Consensus 283 ~~~~~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~ 332 (382)
T PRK11128 283 RWGLMGST-----------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQAL 332 (382)
T ss_pred HHHHHHhh-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHH
Confidence 77666655 2367778888899999888888888887776 5555 6777887
Q ss_pred HH-HHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHH
Q 007612 201 FY-LALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAA 239 (596)
Q Consensus 201 ~~-~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~ 239 (596)
++ ....+|..+||.++|++.+..|+ ..|+..++..+++
T Consensus 333 ~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 333 YSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 65 55678889999999999998887 4555555444433
No 169
>PRK10504 putative transporter; Provisional
Probab=99.16 E-value=9.7e-10 Score=119.92 Aligned_cols=158 Identities=11% Similarity=-0.045 Sum_probs=122.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.+...+...++....+.....+.|.|++..+|.++.+.++......++..++.++.|+++||+ |||+++.++..+..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3445555555666666555556677788878999999999999888888888889999999997 999999988887777
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+..++.+... . .+...+.+..++.|++.+...+....+..+.+|++. ++.++++
T Consensus 340 ~~~~~~~~~~--~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~ 393 (471)
T PRK10504 340 VSLLFMLVAL--L------------------GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSL 393 (471)
T ss_pred HHHHHHhccc--c------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHH
Confidence 7665554311 0 123334455667788888888888999999999888 9999999
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccc
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMW 225 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~ 225 (596)
.+....+|..+|+.++|.+.+..++
T Consensus 394 ~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 394 LSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999988766555
No 170
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.15 E-value=4.1e-10 Score=117.65 Aligned_cols=155 Identities=12% Similarity=0.059 Sum_probs=126.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVG-VNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
+.++..+...+.....++... .+.|.|.++.+|.+..+.+...+...++..++.++.|++.||+ |||+.+..+..+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 345555555566666666565 6778888777999999999999999999999999999999996 99999888876666
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
++..++.+.. .+.+.+++..++.|++.+...+...+++.|.+|++. |++..+
T Consensus 289 ~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~ 340 (365)
T TIGR00900 289 LAILVVGLTP----------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFG 340 (365)
T ss_pred HHHHHHHhhc----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHH
Confidence 6666555541 025667778888999999999999999999999998 999999
Q ss_pred HHHHHHhHHHHHHhhhhhhhccccc
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGM 224 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~ 224 (596)
+++...++|..++|.++|++.+..|
T Consensus 341 ~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 341 AQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999887543
No 171
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.14 E-value=8.6e-10 Score=118.31 Aligned_cols=165 Identities=15% Similarity=0.039 Sum_probs=117.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHH-HHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTR-VLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKT-CAIFQGIF 118 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~-l~~~~~~~ 118 (596)
+.+|......++....++++.+++|.|+++ ..|.+..+++...+...++..++.+++|+++||+ |||+. +.+..++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence 457778888888888999999999999976 3477888899999999999999999999999997 87764 33333333
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.++..+.... ++ ....+.+..+.++|.....+.......+.+|++. |++++
T Consensus 321 ~~~~~~~~~~---~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~ 371 (412)
T TIGR02332 321 AAGWLLASAT---DH--------------------NLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAI 371 (412)
T ss_pred HHHHHHHHhc---CC--------------------HHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHH
Confidence 3332221111 11 1112222223333333333444455567788888 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcccc-cchHHHHHHHHH
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEG-MWALGFWVSTGS 235 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~-~~~~~f~~~~~~ 235 (596)
++.+...++|+.++|.+.|.+.+.. +|++.|++.++.
T Consensus 372 g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 372 AVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 9999999999999999999999876 499998876654
No 172
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.14 E-value=4e-10 Score=121.47 Aligned_cols=214 Identities=14% Similarity=0.043 Sum_probs=139.8
Q ss_pred hhhhhhcccCCCCCccccCcccc-CC--CccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q 007612 5 EICKEEKFKDDGEEHTLDGSVDY-YG--RPAIRAKSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAAN 81 (596)
Q Consensus 5 ~~~~~~~~~~e~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~ 81 (596)
+|.+|+.+.++|.++.++++.+. .+ .+..+..--..+.+|.+.+..++.+++++.+..++|.|+.+.+|+|..+.|+
T Consensus 219 ~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~ 298 (466)
T KOG2532|consen 219 SPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGF 298 (466)
T ss_pred CcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhH
Confidence 57778888888776654332221 11 1222222233468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHhhhccC-------chHHH-HHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchh
Q 007612 82 NVSKWTGTVYIFSLVGAFLSDSYWG-------RFKTC-AIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLE 153 (596)
Q Consensus 82 ~~~~~~~~~~i~~~~~G~laDr~~G-------r~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (596)
..++..+...+..+++|.++||... +||++ .++....++.++.+++. +. .+
T Consensus 299 ~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~---~~------------------~~ 357 (466)
T KOG2532|consen 299 LSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT---SD------------------EH 357 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec---CC------------------Cc
Confidence 9999999999999999999999622 12222 22333333334444433 11 11
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc---ccchHHHH
Q 007612 154 ICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE---GMWALGFW 230 (596)
Q Consensus 154 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~---~~~~~~f~ 230 (596)
....++...+.-...|...+....-..|..| +. -+..+++.+...++.+.++|.+.|.+... ..|+.+|+
T Consensus 358 ~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~ap-q~------a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~ 430 (466)
T KOG2532|consen 358 RLLAVILLTIAIGLSGFNISGFYKNHQDIAP-QH------AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFL 430 (466)
T ss_pred chHHHHHHHHHHHHcccchhhhHhhhhhccc-hH------HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHH
Confidence 1111111111111112222222233333333 33 56889999999999999999999999843 37999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 007612 231 VSTGSAFAALVLFLAG 246 (596)
Q Consensus 231 ~~~~~~~~~~~~~~~~ 246 (596)
+.+++.+++.+.+.+.
T Consensus 431 i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 431 IAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHhchheeEe
Confidence 9988877776555443
No 173
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.14 E-value=1.6e-09 Score=111.46 Aligned_cols=163 Identities=15% Similarity=0.031 Sum_probs=125.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRV--LQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
.+.+++..+..++.....-++..|++.|+.+. +|+++.+.+...+.+..+..++.+++++++||+ |+||.+.++..+
T Consensus 139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l 217 (310)
T TIGR01272 139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFL 217 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Confidence 34556666666666656677889999999864 699999999999999999999999999999997 999998888777
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhH
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAF 197 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 197 (596)
.+++.++.... +. .. ...+.++.|++.+...|...+...+.+|++. +++
T Consensus 218 ~~~~~~l~~~~---~~--------------------~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~a 266 (310)
T TIGR01272 218 AVLLSIGAALT---HG--------------------YV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQG 266 (310)
T ss_pred HHHHHHHHHHc---CC--------------------HH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhh
Confidence 76665444433 11 21 2234557889999999999999999887653 233
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHH
Q 007612 198 FSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGS 235 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~ 235 (596)
.++. ....+|+.+.|.+.|.+.|..|.+.+|++..+.
T Consensus 267 sai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 267 SGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 3444 456799999999999999988988888755543
No 174
>TIGR00895 2A0115 benzoate transport.
Probab=99.13 E-value=8.7e-10 Score=116.61 Aligned_cols=148 Identities=16% Similarity=0.064 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+..+...+..++....++.+..++| ++.+++|.+..+.+...+...++..++.+++|+++||+ |||+.+....+ ..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~-~~~ 326 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLL-GAV 326 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHH-HHH
Confidence 4445555566677777777878887 66678999999999999999999999999999999997 98854443333 333
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
...++... . .+....++..++.|++.+...+...+++.|.+|++. |++++++
T Consensus 327 ~~~~~~~~-~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~ 378 (398)
T TIGR00895 327 FAVLVGST-L---------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGW 378 (398)
T ss_pred HHHHHHHH-h---------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHH
Confidence 32322221 0 124556677788899999999999999999999998 9999999
Q ss_pred HHHHHhHHHHHHhhhhhhh
Q 007612 201 FYLALNLGSLFSNTILGYF 219 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l 219 (596)
.+....+|..+||.++|++
T Consensus 379 ~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 379 AIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999876
No 175
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.13 E-value=2.3e-09 Score=113.72 Aligned_cols=172 Identities=14% Similarity=0.041 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGL 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~ 122 (596)
.+..++..+......+....++++|+.+.+|+++.+.+...+...++..++.++.|+++||+ |+|+.+.++..+.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 44444444555555566667788888888999999999999999999999999999999997 99999988887777776
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhh-ccCCccccccccchhhHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGA-DQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~ 201 (596)
+++..... +....++..++.+++.+...+....... +..+++. ++.+ ..
T Consensus 280 ~~~~~~~~----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~ 329 (382)
T PRK10091 280 LMLFFFGG----------------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA--GG 329 (382)
T ss_pred HHHHHHHh----------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH--HH
Confidence 55543211 1233444444555555444444343333 3333333 4433 34
Q ss_pred HHHHhHHHHHHhhhhhhhccc-ccchHHHHHHHHHHHHHHHHHHh
Q 007612 202 YLALNLGSLFSNTILGYFEDE-GMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l~~~-~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
+...++|..+||.++|++.+. .+|++.+.+.++..++...++..
T Consensus 330 ~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 330 QIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 567789999999999998884 68999998887666555544433
No 176
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.13 E-value=1.6e-09 Score=115.17 Aligned_cols=174 Identities=19% Similarity=0.063 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH-HHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTG-TVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
++..+...++..........+.+.|+.+ .|+++.+.+++...... ...++.+++|++.||+ |+|+.+.++.++..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 4444444455555556666778888875 79999999998888764 5667789999999997 9999998877655333
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCc-cccccccchhhHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDE-EDAKEGHSKVAFFSY 200 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~ 200 (596)
......... .. ...+...++....+.+++.|...+...+...+..++ +. +++.+++
T Consensus 288 ~~~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~~ 344 (390)
T TIGR02718 288 ALLWFAQAA-FW----------------LAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDVTA 344 (390)
T ss_pred HHHHHHHHH-cc----------------cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHHHH
Confidence 222221101 00 001133344444555667777777888887777765 56 8999999
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHH
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALV 241 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~ 241 (596)
.+...++|..++|.++|++.+..||+..|++.+++.+++.+
T Consensus 345 ~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 345 VQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999989999998887765555433
No 177
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.13 E-value=5.2e-09 Score=115.63 Aligned_cols=203 Identities=14% Similarity=0.200 Sum_probs=146.0
Q ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 41 VAGIII-LLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 41 ~~~~~~-~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
+.+.++ .+..+.+.+. .+......+-+.+.++++..+.|++.+.+-++..+...+..+.+-|. -|-|.+-++.++++
T Consensus 96 k~fl~~l~~~~~~q~l~-~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLY-VGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMG 173 (735)
T ss_pred chHHHHHHHHHHHHHhh-hhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHH
Confidence 444444 4444444444 47777777888899999999999999999999999999999999995 66677888899999
Q ss_pred HHHHHHHhhhcc--c---cc--------cC-----CC-CC---CCCCC----CC---CCCchhHHHHHHHHHHHHHhccc
Q 007612 120 IGLVLLSLSSYL--F---LI--------RP-----RG-CG---NELTP----CG---THSSLEICLFYLSIYFVALGNGG 170 (596)
Q Consensus 120 ~~~~~~~~~~~~--~---~~--------~~-----~~-~~---~~~~~----~~---~~~~~~~~~l~~~~~l~g~g~g~ 170 (596)
++.+++.+-... | +. .+ +- || ++.++ +. ..+..-..+++++.++.|+|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 998887764110 0 00 00 00 11 11111 21 11112344788888999999999
Q ss_pred cccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc-------------------ccchHHHHH
Q 007612 171 YQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE-------------------GMWALGFWV 231 (596)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~-------------------~~~~~~f~~ 231 (596)
+++...+++=|...++. -...+|+.+....+|.++|..+++++.+. ..|+..|++
T Consensus 254 i~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi 327 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLI 327 (735)
T ss_pred CccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHH
Confidence 99999999999988777 67889999999999999999988876532 127778888
Q ss_pred HHHHHHHHHHHHHhcCccee
Q 007612 232 STGSAFAALVLFLAGTTRYR 251 (596)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~ 251 (596)
.+.+.++..+.+++++++.+
T Consensus 328 ~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 328 CGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHHhCcccCc
Confidence 87777777776777666554
No 178
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.11 E-value=9.8e-12 Score=136.52 Aligned_cols=197 Identities=13% Similarity=0.146 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHH
Q 007612 45 IILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVL 124 (596)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~ 124 (596)
.+++..+.+ ....+......+-+.++++++.++.|++.+.+.++..+..++..+.++|. .|=|.+-++.+++++|.++
T Consensus 7 ~~~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 7 FLCLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHH
Confidence 344444555 55566666666778899999999999999999999999999999999994 6777888888899999888
Q ss_pred HHhhhccccccCCCC----------CC--CCCCC-------------------CCCCchhHHHHHHHHHHHHHhcccccc
Q 007612 125 LSLSSYLFLIRPRGC----------GN--ELTPC-------------------GTHSSLEICLFYLSIYFVALGNGGYQP 173 (596)
Q Consensus 125 ~~~~~~~~~~~~~~~----------~~--~~~~~-------------------~~~~~~~~~~l~~~~~l~g~g~g~~~~ 173 (596)
+++- .+..+.. ++ +...| +.........++++.++.|+|...+++
T Consensus 85 ~~lP----hf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 85 FALP----HFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred Hhcc----HhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 7753 2221111 10 11112 111122356788999999999999999
Q ss_pred chhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc----------------------ccchHHHHH
Q 007612 174 NIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE----------------------GMWALGFWV 231 (596)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~----------------------~~~~~~f~~ 231 (596)
...+++=|..+++. -+...|+++....+|.++|..+++.+.+. ..|+..|++
T Consensus 161 LG~tYiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli 234 (539)
T PF03137_consen 161 LGITYIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLI 234 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHH
Confidence 99999999999888 77889999999999999999888866531 127777777
Q ss_pred HHHHHHHHHHHHHhcCcceecc
Q 007612 232 STGSAFAALVLFLAGTTRYRHF 253 (596)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~ 253 (596)
.+.+.++..+-++.++|+.++.
T Consensus 235 ~g~~~~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 235 CGILLFLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp ----------------------
T ss_pred HHHHHHHHHHHHHcCCccCCCc
Confidence 7766666666666666665443
No 179
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.09 E-value=2.9e-09 Score=113.77 Aligned_cols=156 Identities=12% Similarity=0.142 Sum_probs=104.2
Q ss_pred HHHHHHHHHhhCCChHHHHHHHHHHH-HHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 007612 62 VNLVLFLTRVLQQNNAEAANNVSKWT-GTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCG 140 (596)
Q Consensus 62 ~~l~~yl~~~lg~~~~~~~~~~~~~~-~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (596)
.+.+.|+.+++|+++.+.+++.+... ++..++.+++|++.||+ |||+.+.++.++..+..+.+......+
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~-------- 300 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTP-------- 300 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 34455777889999999999886654 45788999999999997 999988777666555543332211101
Q ss_pred CCCCCCCCCCchhHHHHHHHHH----HHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhh
Q 007612 141 NELTPCGTHSSLEICLFYLSIY----FVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTIL 216 (596)
Q Consensus 141 ~~~~~~~~~~~~~~~~l~~~~~----l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~ 216 (596)
.+.+.+++..+ ..|++.+...+....++.+.+|.++ + ++++...++|..+++.++
T Consensus 301 -----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~l~~~~~~~~~ 359 (402)
T PRK11902 301 -----------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----ALLSALASVGRVYVGPTS 359 (402)
T ss_pred -----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HHHHHHHHHHHHHHHHHH
Confidence 11333443333 3455555666666667777666544 3 444445567776666789
Q ss_pred hhhcccccchHHHHHHHHHHHHHHHHHHhcC
Q 007612 217 GYFEDEGMWALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 217 g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
|++.+..||+..|.+.+++.+++.++.+...
T Consensus 360 G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 360 GYLVEAYGWPGFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988877766665554433
No 180
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.09 E-value=9.8e-10 Score=118.49 Aligned_cols=162 Identities=17% Similarity=0.065 Sum_probs=121.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.++..++..++....++....+.+.|.+..++ ++.+.++..+...++..++.++.|+++||+ |||+++.++.++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 455666666677766666655555555555555 566677788888899999999999999997 999999999888877
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCcccc-ccccchhhHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDA-KEGHSKVAFFS 199 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~ 199 (596)
+.+++.+. + .+...+++..++.|++.+...+...++++|..|.++. ...+.++..++
T Consensus 300 ~~~~~~~~---~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 357 (437)
T TIGR00792 300 GYLIFFFA---G-------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYS 357 (437)
T ss_pred HHHHHHHc---c-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHH
Confidence 77666554 1 1245566677788899998889999999998764321 01112688999
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccch
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWA 226 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~ 226 (596)
+++....+|..+++.+.|++.+..||.
T Consensus 358 ~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 358 VRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999988766663
No 181
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.09 E-value=2.7e-09 Score=111.84 Aligned_cols=153 Identities=15% Similarity=0.067 Sum_probs=118.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.++...+..++....++.+..++|.|+++ .|.+..+.+...+...++..++.++.|+++||+.+||+.+.++.++.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 445666666667777888888999999975 7999999999999999999999999999999963466677777777777
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCc-cccccccchhhHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDE-EDAKEGHSKVAFFS 199 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~ 199 (596)
+.+.+.+. ++ .... ....+.|++.|...|...+.+.+..++ +. ++..++
T Consensus 276 ~~~~~~~~---~~--------------------~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~ 325 (355)
T TIGR00896 276 GLCGLLFA---PM--------------------HGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ------AAALSA 325 (355)
T ss_pred HHHHHHHh---hh--------------------hHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH------HHHHHH
Confidence 76666554 11 1111 134678899999888887877766554 44 778888
Q ss_pred HHHHHHhHHHHHHhhhhhhhccccc
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGM 224 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~ 224 (596)
+.+...++|..++|.+.|++.++.|
T Consensus 326 ~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 326 MAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888889999999999999988765
No 182
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.08 E-value=4.7e-09 Score=110.82 Aligned_cols=162 Identities=11% Similarity=0.102 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
.++...+........++....+.|.|+++.+|.++.+.+.+.+...++..++.++.|+++||+ |||+.+.++..+..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 207 MFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVS 285 (385)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344445555555666677777888888889999999999999999999999999999999997 9999998887777777
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.+++......+. .....+++..++.|++.+...+.......|..| +. |+++.+++
T Consensus 286 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~ 340 (385)
T TIGR00710 286 AVLLEITAILGL------------------GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASALF 340 (385)
T ss_pred HHHHHHHHHhcc------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHHH
Confidence 666655421110 123445555667888888888888888888876 45 78889987
Q ss_pred HHHHhH-HHHHHhhhhhhhcccccchHHHH
Q 007612 202 YLALNL-GSLFSNTILGYFEDEGMWALGFW 230 (596)
Q Consensus 202 ~~~~~l-g~~~~~~i~g~l~~~~~~~~~f~ 230 (596)
+..... |++.+| +.+.+.+..+|...+.
T Consensus 341 ~~~~~~~g~i~~~-~~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 341 GTLRLVLGAIVGY-LVSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHH-HHHhccccChHHHHHH
Confidence 776654 555555 4555555444544433
No 183
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.06 E-value=4.2e-09 Score=115.44 Aligned_cols=167 Identities=15% Similarity=0.122 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHh
Q 007612 48 LNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSL 127 (596)
Q Consensus 48 ~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~ 127 (596)
...+..++....+...+|.+.++.+|.++...|++.+.+.++..++.++.+++.+|+ ++++.+..+.++++++.+.+++
T Consensus 225 ~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~lal 303 (524)
T PF05977_consen 225 LRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLLAL 303 (524)
T ss_pred HHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHHhc
Confidence 333344444445556688888899999999999999999999999999999999996 9999988888888888887777
Q ss_pred hhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhH
Q 007612 128 SSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNL 207 (596)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 207 (596)
+ .+.+..++..++.|++.........+.+.+..|++. ||+.++++++....
T Consensus 304 ~-----------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~~~~g 354 (524)
T PF05977_consen 304 S-----------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQMVFFG 354 (524)
T ss_pred c-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHHHHHH
Confidence 6 236777778888999988888888999999999999 99999999999999
Q ss_pred HHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHH
Q 007612 208 GSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 208 g~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~ 244 (596)
+..+|.++.|.+.+..|-+.++.+.++..++..++..
T Consensus 355 ~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 355 GMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888877765555544443
No 184
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.06 E-value=2.9e-09 Score=117.03 Aligned_cols=154 Identities=11% Similarity=-0.009 Sum_probs=128.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.+...+...++....+++...++|.|+++.+|.++.+++.......++..++.+++|++.||+ |+|+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4555666677777777888888999999999999999999999999999999999999999997 999999888888777
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+..++..... ..+.+...+..++.|+|.|...+.....+.+..|+++ ++.+.++
T Consensus 338 ~~~~l~~~~~--------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~ 391 (495)
T PRK14995 338 SFYGLAMTDF--------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAI 391 (495)
T ss_pred HHHHHHHhcC--------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHH
Confidence 7766554311 0124445667788899999998888999999999998 9999999
Q ss_pred HHHHHhHHHHHHhhhhhhhcc
Q 007612 201 FYLALNLGSLFSNTILGYFED 221 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~ 221 (596)
++...++|+.+|+.+.|.+.+
T Consensus 392 ~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 392 ETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998754
No 185
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.04 E-value=2.6e-09 Score=116.78 Aligned_cols=156 Identities=14% Similarity=0.088 Sum_probs=128.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.++..++..+.....+++...++|.|+++.+|.++.++++......++..++.++.|++.||+ |||+.+.++..+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 4455666777777788888888999999999999999999999999999999999999999997 999999998888877
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+..++.+... ++ .+...++...++.|+|.+...+.......+.+|+++ |+++.++
T Consensus 334 ~~~~~~~~~~-~~------------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~ 388 (485)
T TIGR00711 334 GFYWRAFTFT-PD------------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSL 388 (485)
T ss_pred HHHHHhccCC-CC------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHH
Confidence 7776653211 11 224555666778899998888777788888889888 9999999
Q ss_pred HHHHHhHHHHHHhhhhhhhccc
Q 007612 201 FYLALNLGSLFSNTILGYFEDE 222 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~ 222 (596)
++...++|+.+|+.+.+.+.++
T Consensus 389 ~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 389 SNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987654
No 186
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.02 E-value=1.5e-08 Score=110.67 Aligned_cols=164 Identities=13% Similarity=0.065 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 007612 59 GVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRG 138 (596)
Q Consensus 59 ~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (596)
.+..+.|.+ .+..|.+..+..+......+...++.+++|+++||+ |||+.++++.++.+++.+++......+.
T Consensus 289 ~~~~~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~~----- 361 (479)
T PRK10077 289 VVLYYAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQA----- 361 (479)
T ss_pred HHHHHHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcCc-----
Confidence 334444444 456888877777777777888899999999999997 9999999999888888777664411010
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccc-cccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhh
Q 007612 139 CGNELTPCGTHSSLEICLFYLSIYFVALGNGG-YQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILG 217 (596)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g 217 (596)
... ....+.++.+.+.+. ..|...++++|.+|++. |++++++.+...++|.++++.+.+
T Consensus 362 -------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p 421 (479)
T PRK10077 362 -------------PGI-VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFP 421 (479)
T ss_pred -------------ccH-HHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 111 222333344443332 34778899999999998 999999998888888888755544
Q ss_pred ------hhcccccchHHHHHHHHHHHHHHHHHHhcCcc
Q 007612 218 ------YFEDEGMWALGFWVSTGSAFAALVLFLAGTTR 249 (596)
Q Consensus 218 ------~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 249 (596)
++.+..+|++.|++.++..+++.++.+...++
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 459 (479)
T PRK10077 422 MMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPE 459 (479)
T ss_pred HHHhccchhhhccCccHHHHHHHHHHHHHHHHHhcccc
Confidence 44467788888888776655555554444443
No 187
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.00 E-value=6.3e-09 Score=114.63 Aligned_cols=170 Identities=14% Similarity=0.068 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHH------------HHHHHHHHHHHHhhhHHHHhhhccCchHHHHH
Q 007612 46 ILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAAN------------NVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAI 113 (596)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~------------~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~ 113 (596)
.....++..+.+|++..+.|.+++ .+|++..+.+. ......++..++.++.++++||+ |||+++++
T Consensus 293 ~~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~ 370 (502)
T TIGR00887 293 TAGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLM 370 (502)
T ss_pred HHHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHH
Confidence 334445566778888888888885 67876543221 12233445556778899999997 99999988
Q ss_pred HHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccc
Q 007612 114 FQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHS 193 (596)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 193 (596)
+..+.+++..++++.....+ . ...+....+...++..+..+..+.+.+|.+|++.
T Consensus 371 ~~~~~~~~~~~l~~~~~~~~------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------ 425 (502)
T TIGR00887 371 GFFILTVLFFVLGFAYNHLS------------------T-HGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------ 425 (502)
T ss_pred HHHHHHHHHHHHHHHHHhcc------------------h-hHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------
Confidence 88777777666655411000 0 1111111112222223345667788899999999
Q ss_pred hhhHHHHHHHHHhHHHHHHhhhhhhhccc----------ccchHHHHHHHHHHHHHHHH
Q 007612 194 KVAFFSYFYLALNLGSLFSNTILGYFEDE----------GMWALGFWVSTGSAFAALVL 242 (596)
Q Consensus 194 r~~~~~~~~~~~~lg~~~~~~i~g~l~~~----------~~~~~~f~~~~~~~~~~~~~ 242 (596)
|+++.++.+....+|++++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 426 R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 426 RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988773 23445666665555544443
No 188
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.99 E-value=3.1e-08 Score=105.61 Aligned_cols=166 Identities=9% Similarity=-0.045 Sum_probs=120.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.++...+..++....+++...++++++.+++|++..+.+.+.....++..++.++.|++.||. +|+ .++.+..+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~-~l~~~~~~~~~ 293 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKL-ALAGAPLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-HHHHHHHHHHH
Confidence 4455555555565566666667765555567899999999999999999999999999999994 544 44444333333
Q ss_pred H-HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 121 G-LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 121 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
. .++.... .+.+.+.+..++.|++.+...+...+++.+..|+ + +++..+
T Consensus 294 ~~~~l~~~~-----------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~~~~ 343 (394)
T PRK10213 294 SALVLTLWG-----------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEKAGS 343 (394)
T ss_pred HHHHHHHHh-----------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHHHHH
Confidence 3 3333332 1255666777888999999999899899888873 3 446667
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHH
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFA 238 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~ 238 (596)
++....++|..+||.++|++.+..|++..++..+++.++
T Consensus 344 ~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 344 IQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHH
Confidence 777778899999999999999989998888877654433
No 189
>PRK10133 L-fucose transporter; Provisional
Probab=98.98 E-value=1.5e-08 Score=109.62 Aligned_cols=163 Identities=12% Similarity=0.058 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 007612 44 IIILLNQGLATLAFFGVGVNLVLFL-TRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGL 122 (596)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~yl-~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~ 122 (596)
+...+..++.....++...+++.|+ ++.+|+++.++++....+.++..++.+++|++.||+ |||+++..+.++.+++.
T Consensus 261 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~ 339 (438)
T PRK10133 261 RWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALC 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence 3344444555566666777888886 567899999999999999999999999999999997 99999988877666555
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFY 202 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 202 (596)
.+..+. +. . ..+....+.|++.+...|...+...+.+|++. +.+.++..
T Consensus 340 ~~~~~~---~~--------------------~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~l~~ 388 (438)
T PRK10133 340 LISAFA---GG--------------------H-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSSFIV 388 (438)
T ss_pred HHHHHc---CC--------------------h-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchhHHh
Confidence 444433 11 1 12445667899999999999999999987643 24444443
Q ss_pred HHHhHHHHHHhhhhhhhccccc-chHHHHHHHHHHHHH
Q 007612 203 LALNLGSLFSNTILGYFEDEGM-WALGFWVSTGSAFAA 239 (596)
Q Consensus 203 ~~~~lg~~~~~~i~g~l~~~~~-~~~~f~~~~~~~~~~ 239 (596)
. ..+|+.++|.+.|++.+..| -+..|++..+..+..
T Consensus 389 ~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 389 M-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred H-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 3 33678888889999988877 678887665544433
No 190
>PRK10054 putative transporter; Provisional
Probab=98.98 E-value=8e-09 Score=110.19 Aligned_cols=173 Identities=17% Similarity=0.021 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRV--LQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
.++......++....+.....+++.|+... .+.+....++..+...+......++.|++.||+ ++|+.+.++.++..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHH
Confidence 444444555555555555555666776533 455566667777777777777778889999997 99999988887777
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
++...+.+.. ++.+.+.+..++.++|.+...|...+++.+..|++. |++.++
T Consensus 286 ~~~~~~~~~~----------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~ 337 (395)
T PRK10054 286 IGLVGFIFSG----------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFS 337 (395)
T ss_pred HHHHHHHHcc----------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHh
Confidence 7776665431 124556667788899988888888899999999888 888887
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHH
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~ 244 (596)
..+ ...+|..+||.++|++.++.|....|++.+...+++.++.+
T Consensus 338 ~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 338 AQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 654 56689999999999999999988888776655555544443
No 191
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.97 E-value=1.4e-08 Score=108.42 Aligned_cols=151 Identities=13% Similarity=0.076 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCC
Q 007612 60 VGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGC 139 (596)
Q Consensus 60 ~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (596)
...++|.|+++..+ ++.+.+++.+...++...+..+.+++.||..+.++.+..+..+..++..++++. +
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~---~------- 295 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV---S------- 295 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh---h-------
Confidence 45677888876655 667788887777766665555556666653366777777777777776666655 1
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhh
Q 007612 140 GNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYF 219 (596)
Q Consensus 140 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l 219 (596)
+...+.+...+.+++.+...|...+++.+..|++. |++.+++++...++|..+||.++|++
T Consensus 296 -------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 296 -------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWL 356 (400)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHH
Confidence 24445556677788888888999999999999998 99999999999999999999999999
Q ss_pred cccc---c-chHHHHHHHHHHHHHH
Q 007612 220 EDEG---M-WALGFWVSTGSAFAAL 240 (596)
Q Consensus 220 ~~~~---~-~~~~f~~~~~~~~~~~ 240 (596)
.+.. + ....|+...+..++..
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (400)
T PRK11646 357 FDLGKALNQPELPWMMLGIIGLITL 381 (400)
T ss_pred HHHHhhcCCcchHHHHHHHHHHHHH
Confidence 8764 2 2445554444433333
No 192
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.96 E-value=3.3e-09 Score=110.23 Aligned_cols=144 Identities=22% Similarity=0.249 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQN-NAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~-~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
+|......++....++....+++.|+.+.+|.+ ..+.+...+...+...++.++.|+++||+ |+|+...+......++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 208 LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILG 286 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHH
Confidence 344455555555667778889999988999999 79999999999999999999999999997 9888888777776766
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.+.+.+.... .+....+...++.|++.+...+...+++.+.+|++. |+++.++.
T Consensus 287 ~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 340 (352)
T PF07690_consen 287 ALGLLLLPFS--------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLF 340 (352)
T ss_dssp HHHHCCSHHH--------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHH
T ss_pred HHHHHHHHHh--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHH
Confidence 6666554221 135566667778899999999999999999999998 99999999
Q ss_pred HHHHhHHHHHHh
Q 007612 202 YLALNLGSLFSN 213 (596)
Q Consensus 202 ~~~~~lg~~~~~ 213 (596)
+...++|+.+||
T Consensus 341 ~~~~~~~~~igP 352 (352)
T PF07690_consen 341 NSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC
Confidence 999999999987
No 193
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.94 E-value=3.7e-08 Score=105.77 Aligned_cols=185 Identities=15% Similarity=0.026 Sum_probs=123.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+..|++++..++....|.+...++|.|+++.+ +.........+..+...+..|++|+++||+ |++|++.++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 35788999898888888888889999988755 333333334455677889999999999997 999999988877666
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccc-------------
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEED------------- 187 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~------------- 187 (596)
+...+.+.. |. ....+...+.+..+...++.|.-..++..++.+.+|++.
T Consensus 329 ~~~~~~l~l--p~---------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~ 391 (462)
T PRK15034 329 FSALLFLTL--PG---------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQ 391 (462)
T ss_pred HHHHHHHHh--cc---------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhH
Confidence 654433331 11 001234555554444445555555666677777776410
Q ss_pred --cccccchhhHHHHHHHHHhHHHHHHhhhhhhhccc-ccchHHHHHHHHHHHHHHHHHHh
Q 007612 188 --AKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDE-GMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 188 --~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~-~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
+..++.-+...|+......+|+.+-|.+.|...+. .++...|+...+..+++..+.+.
T Consensus 392 ~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 392 AQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred HhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 00111256778888888899999999887777655 45788888777666655555443
No 194
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.94 E-value=1.9e-08 Score=121.99 Aligned_cols=164 Identities=12% Similarity=0.035 Sum_probs=129.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChH-HHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNA-EAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~-~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
+.++..++..++.....+.+..+++.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++.+.++.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~ 310 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLA 310 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHH
Confidence 4455555555555556666778899999999999998 999999999999999999999999997 99998888887777
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
++.+++.+. .+...++++.++.|++.++..+...+++.+.+|++. |+++++
T Consensus 311 ~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~ 361 (1146)
T PRK08633 311 LSLFLLPTA-----------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLA 361 (1146)
T ss_pred HHHHHHHHh-----------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhH
Confidence 777666655 125666777788899999888899999999999998 999999
Q ss_pred HHHHHHhHHHHHHhhhhhhhcc-cccchHHHHHHHH
Q 007612 200 YFYLALNLGSLFSNTILGYFED-EGMWALGFWVSTG 234 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~-~~~~~~~f~~~~~ 234 (596)
+.++..++|.++++.+++.+.. .+++...|++.+.
T Consensus 362 ~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 362 ANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 9999999999888877776543 2344445554443
No 195
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.93 E-value=1.5e-08 Score=104.50 Aligned_cols=172 Identities=14% Similarity=0.078 Sum_probs=137.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.+...+++.+..+=+.-++......|....+|++..+...+.....+...++++++|+|.||+ |.|+++++++++..+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 3666677777777666667778888899999999999999999999999999999999999997 999999999887777
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
..+...+.. ....+.+.-.+.|+..|+.++..-++.++.+|+++ -++.||+
T Consensus 331 ~~~~~~~~~-----------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFgl 381 (438)
T COG2270 331 AALYLIFLE-----------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGL 381 (438)
T ss_pred HHHHHHHcc-----------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeeh
Confidence 665555441 13335555578899999999999999999999998 7899999
Q ss_pred HHHHHhHHHHHHhhhhhhhccccc-chHHHHHHHHHHHHHHHH
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGM-WALGFWVSTGSAFAALVL 242 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~-~~~~f~~~~~~~~~~~~~ 242 (596)
|++.......+||+..+.+.+.+| -|..+....+..++++++
T Consensus 382 yaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 382 YALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 999999999999999998887654 455544444444444443
No 196
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.92 E-value=4e-08 Score=103.68 Aligned_cols=167 Identities=14% Similarity=-0.063 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCch---HHHHH-HHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRF---KTCAI-FQG 116 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~---~~l~~-~~~ 116 (596)
+.+|.+....++....+|++..|+|.|+++ .|++.. .+...+...+...+ ..++++||. .|| +.... ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~---g~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLI---GVAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHH---HHHHhhHHh-hhhhhHHHHHHHHHH
Confidence 567888899999999999999999999964 678764 45554444444444 457888885 543 33232 333
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
+.++....+.+. . +....++...+.+++.....+...++.+|.+|++. |++
T Consensus 266 ~~a~~~~~~~~~---~--------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt 316 (368)
T TIGR00903 266 LIAAFFLALAFE---L--------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGK 316 (368)
T ss_pred HHHHHHHHHHHc---c--------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCc
Confidence 333333333322 1 12233444455667677777778899999999999 999
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHH
Q 007612 197 FFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFL 244 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~ 244 (596)
+.++.+...++|+.++|++.+.+.. +....|.+.++..+++.+..+
T Consensus 317 ~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 317 AAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887763 666777766666555555443
No 197
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.92 E-value=6.5e-07 Score=91.34 Aligned_cols=155 Identities=13% Similarity=0.044 Sum_probs=104.3
Q ss_pred HHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCC
Q 007612 69 TRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGT 148 (596)
Q Consensus 69 ~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (596)
.+++|++..+.+.+.........+..++.|.++||+ |||+.+++.+++.+++.+..-.
T Consensus 61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~--------------------- 118 (354)
T PF05631_consen 61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS--------------------- 118 (354)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc---------------------
Confidence 357899999999999999999999999999999997 9999999999888887754322
Q ss_pred CCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHH-HHHhHHHHHHhhhhhhhccccc--c
Q 007612 149 HSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFY-LALNLGSLFSNTILGYFEDEGM--W 225 (596)
Q Consensus 149 ~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~lg~~~~~~i~g~l~~~~~--~ 225 (596)
.++..++++|++.|++.....++--+.+.....++.- +..-.+.-++... ....+-++++..++-++.+..+ .
T Consensus 119 ---~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~-~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~ 194 (354)
T PF05631_consen 119 ---SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGF-PQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGP 194 (354)
T ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCC
Confidence 2488899999999999999888777765332221110 0000233333222 1222223444444445555444 4
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCcc
Q 007612 226 ALGFWVSTGSAFAALVLFLAGTTR 249 (596)
Q Consensus 226 ~~~f~~~~~~~~~~~~~~~~~~~~ 249 (596)
..+|....+..+++.+++....++
T Consensus 195 vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 195 VAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred cchHHHHHHHHHHHHHHHHhcccc
Confidence 778888877766666655444443
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.90 E-value=1.2e-08 Score=106.85 Aligned_cols=145 Identities=13% Similarity=0.042 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH-HHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWT-GTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~-~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
.++...+..++....++...++++.|+++ +|+++.+.+.+.+... ++..++.+++|+++||+ |||+.+.++.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 46666666777788888888999999987 9999999998887765 56789999999999997 999999888877777
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+..+..+..+... | .+ .+..+.+.+..+.++.+++.+...+...+++.+.+|++. |++.+++
T Consensus 288 ~~~~~~~~~~~~~----------~-~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~ 349 (356)
T TIGR00901 288 TNAGFVWLASNGH----------H-DG-ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMAL 349 (356)
T ss_pred HHHHHHHHHhcCc----------c-cc-cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHH
Confidence 6655544311000 0 00 011235667777788899999999999999999999999 9999999
Q ss_pred HHHHHh
Q 007612 201 FYLALN 206 (596)
Q Consensus 201 ~~~~~~ 206 (596)
++...+
T Consensus 350 ~~~~~~ 355 (356)
T TIGR00901 350 LSSLSA 355 (356)
T ss_pred HHHHHh
Confidence 877655
No 199
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.89 E-value=2.5e-08 Score=120.79 Aligned_cols=184 Identities=11% Similarity=-0.073 Sum_probs=132.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
.+.++..++..++....++++..++|.|+++.+|.++.+.+++.+.+.++..++.++.|+++|+. ++++.+.++.++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~ 302 (1140)
T PRK06814 224 DKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMG 302 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHH
Confidence 35667777777777777778888999999999999999999999999999999999999999986 76666665555544
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTP-CGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
++.+.+.+... ....+ +...-. .......+.+.++++.++.|++.+...+...+++.+.+|++. |++++
T Consensus 303 ~~~~~l~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~ 372 (1140)
T PRK06814 303 LFGLDLAFASS-SVPAE---PAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVI 372 (1140)
T ss_pred HHHHHHHhccc-ccccc---cccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeee
Confidence 44443333200 00000 000000 000001234566677788899999999999999999999999 99999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhcc-cccchHHHHHHHH
Q 007612 199 SYFYLALNLGSLFSNTILGYFED-EGMWALGFWVSTG 234 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~-~~~~~~~f~~~~~ 234 (596)
|..+....+|..+++++++.+.+ ..++...|++.++
T Consensus 373 g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 373 AANNVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 99999999999999999988863 4566666655443
No 200
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.88 E-value=9.3e-08 Score=100.89 Aligned_cols=150 Identities=9% Similarity=0.002 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
..+..++..++.....+....+.+.++.+.+|+++.+.+...+...++..++.++.|+++||+ |||+++.++..+..+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 273 (377)
T PRK11102 195 RVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIM 273 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 344445555555566666667777888888999999999999999999999999999999997 9999998887654443
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.+.+..... .+ .+.+...++..+.+.+.+...+.....+.|..| +. +++..++.
T Consensus 274 ~~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~ 327 (377)
T PRK11102 274 GIWLVVSAL-LD------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLA 327 (377)
T ss_pred HHHHHHHHH-Hh------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHH
Confidence 332222200 00 123334444444455555555666667777766 55 77888875
Q ss_pred HHH-HhHHHHHHhhhhhh
Q 007612 202 YLA-LNLGSLFSNTILGY 218 (596)
Q Consensus 202 ~~~-~~lg~~~~~~i~g~ 218 (596)
+.. ..+|..+++++++.
T Consensus 328 ~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 328 GTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 543 45777777766543
No 201
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.87 E-value=7.7e-08 Score=103.72 Aligned_cols=163 Identities=20% Similarity=0.140 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.++..+...++............+.|.+..+|.+ ...+.......+...++.++.++++||+ |+|+++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 45566666777777777767777777788888877 4567778888999999999999999997 999999999999999
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccc-cccchhhHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAK-EGHSKVAFFS 199 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~ 199 (596)
+.+++.+... .+.+.+++..++.|++.+...+...++++|..+.++.+ .++..+..+|
T Consensus 303 ~~~~~~~~~~---------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s 361 (428)
T PF13347_consen 303 GFLLLFFLGP---------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFS 361 (428)
T ss_pred HHHHHHHHHh---------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHH
Confidence 9888887721 34788888899999999999999999999999854321 1222578888
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccch
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWA 226 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~ 226 (596)
.+.....+|..+++.+.+.+.+..||.
T Consensus 362 ~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 362 VNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 899999999999999998886655543
No 202
>PRK09848 glucuronide transporter; Provisional
Probab=98.84 E-value=3.7e-08 Score=106.82 Aligned_cols=163 Identities=10% Similarity=0.075 Sum_probs=120.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.++..++..++....++......+.|+++.+|.++...++......++..++.++.++++||+ |+|+++.++.++.++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4455566666666666666666677777878887766555544444667788899999999997 999999999888888
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCcccccc-ccchhhHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKE-GHSKVAFFS 199 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~ 199 (596)
+.+++.+. +. .+.+.+++..++.|+|.+...+...++.+|..|+++.++ ++.++..++
T Consensus 307 ~~~~~~~~---~~------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~ 365 (448)
T PRK09848 307 GYLLFFWV---SV------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYS 365 (448)
T ss_pred HHHHHHHc---Cc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHH
Confidence 77766654 21 235556677778899999999999999999987643111 111578889
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccc
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMW 225 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~ 225 (596)
++++...+|..+|+.+.+.+.+..||
T Consensus 366 ~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 366 LFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999998887665554
No 203
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.84 E-value=1.6e-07 Score=100.12 Aligned_cols=156 Identities=9% Similarity=-0.091 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccc
Q 007612 55 LAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLI 134 (596)
Q Consensus 55 ~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~ 134 (596)
.........++.|+++.+|.++.+.+.+.+...++..++.++.|++.||+ ++++.+..+.+. .+..+.+.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~------ 290 (393)
T PRK11195 219 GAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQ------ 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHH------
Confidence 33444555667788889999999999999999999999999999999996 888888777533 3333333332
Q ss_pred cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhh
Q 007612 135 RPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNT 214 (596)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~ 214 (596)
++.+...+..++.|++.+...+...+.+.+..|++.. +++++++.+...++|..++..
T Consensus 291 -----------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~-----~g~~~a~~~~~~~~~~~~~~~ 348 (393)
T PRK11195 291 -----------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVG-----AGHSIAVQNFNENLAMLLMLG 348 (393)
T ss_pred -----------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCccccc-----chhHHHHHhHHHHHHHHHHHH
Confidence 2245555667788899888888888888876544321 688999999999999999998
Q ss_pred hhhhhcccccchHHHHHHHHHHHHHHH
Q 007612 215 ILGYFEDEGMWALGFWVSTGSAFAALV 241 (596)
Q Consensus 215 i~g~l~~~~~~~~~f~~~~~~~~~~~~ 241 (596)
+.+.+ +..|-+..+++.....++.+.
T Consensus 349 ~~~~~-~~~~~~~~~~~~~~~~~~~~~ 374 (393)
T PRK11195 349 LYSLL-VKLGVPVVAVIVGFGLLVALA 374 (393)
T ss_pred HHHHH-HHcCCCHHHHHHHHHHHHHHH
Confidence 88866 456767777665544444433
No 204
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.83 E-value=7.1e-08 Score=103.33 Aligned_cols=186 Identities=15% Similarity=0.057 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLA-FFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV 119 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~-~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~ 119 (596)
+..++.+...+.+... ...+..+. ..+-+..|++..++.+..........++.+++.++.||+ |||+.++++...+.
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Ys-t~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~ 346 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYS-TSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMA 346 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHH
Confidence 4445555555554443 33444443 444457899999999999999999999999999999997 99999999999888
Q ss_pred HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHH---HHHHHHHHHHHhcc-ccccchhhhhhccCCccccccccchh
Q 007612 120 IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEIC---LFYLSIYFVALGNG-GYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
+..+++.......+ ....+ ..+++.++..++.+ +..|..+-+.+|.+|+.. |.
T Consensus 347 ~~~~~~~~~~~l~~-----------------~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~ 403 (485)
T KOG0569|consen 347 VALLLMSIALFLSN-----------------SFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RS 403 (485)
T ss_pred HHHHHHHHHHHHHH-----------------HhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hH
Confidence 88777766533222 00011 12333333332222 346888999999999999 99
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcceec
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRYRH 252 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 252 (596)
.++++......+...+-......+.+..|- +.|++.++..++..+..+...|+.+.
T Consensus 404 aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 404 AAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 999987776666666655555566665554 55555555555555555555555443
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.83 E-value=9.3e-08 Score=100.49 Aligned_cols=181 Identities=10% Similarity=0.050 Sum_probs=144.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQ---QNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQ 115 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~ 115 (596)
+-|.+|.+.+...+....|+..-+..+.|.+..++ .++...|.+.+...+.-.+...+..++.+|+ |.|+.++++.
T Consensus 218 k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag 296 (412)
T PF01306_consen 218 KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAG 296 (412)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHH
Confidence 44678887777777777777777778889876543 3445567888888888888899999999996 9999999999
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 116 GIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
.+.++=..+++++ ++++.+.+...+.++-.+....+..-++.+.+|++. .+
T Consensus 297 ~i~~iRi~~~~~~-----------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sA 347 (412)
T PF01306_consen 297 VIMAIRIIGSGFA-----------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SA 347 (412)
T ss_dssp HHHHHHHHHHHT-------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HH
T ss_pred HHHHHHHHHHhhh-----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HH
Confidence 9988888888887 237889999999999999999999999999999888 77
Q ss_pred hHHHH-HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcc
Q 007612 196 AFFSY-FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTR 249 (596)
Q Consensus 196 ~~~~~-~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 249 (596)
+...+ ++....+|..+.+.++|++.|..|++..|++.+.++++..++..+..++
T Consensus 348 t~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 348 TLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 88887 5778899999999999999999999999988777666555555554443
No 206
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.82 E-value=4.7e-08 Score=106.76 Aligned_cols=176 Identities=16% Similarity=0.114 Sum_probs=147.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCc--hHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGR--FKTCAIFQGIF 118 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr--~~~l~~~~~~~ 118 (596)
+.++...+...+..++++.-..+++.|.+ ..|++..+++.+.++..+...++.++.|+++|+. .. +.+..++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 67788888888888888888888998887 8999999999999999999999999999999995 63 33455555556
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHH
Q 007612 119 VIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFF 198 (596)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 198 (596)
.++.+.+.+. .++..++..-.+.|++.|.+.......+.|..+.++ ...++
T Consensus 376 gl~~~~~p~~-----------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~ 426 (509)
T KOG2504|consen 376 GLARLFLPFA-----------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAY 426 (509)
T ss_pred HHHHHHHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHH
Confidence 6666556655 237778888889999999998888899999999998 88999
Q ss_pred HHHHHHHhHHHHHHhhhhhhhccccc-chHHHHHHHHHHHHHHHHHHhcC
Q 007612 199 SYFYLALNLGSLFSNTILGYFEDEGM-WALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 199 ~~~~~~~~lg~~~~~~i~g~l~~~~~-~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
|+......++.++||.++|++.+..+ |...|+.+.+..+++..+.++.+
T Consensus 427 Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 427 GLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999999999998877 99999998877777765555444
No 207
>PRK11043 putative transporter; Provisional
Probab=98.82 E-value=3.4e-07 Score=97.62 Aligned_cols=153 Identities=10% Similarity=0.061 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 007612 49 NQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLS 128 (596)
Q Consensus 49 ~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~ 128 (596)
........++....+.|.|++ +.|+++.+.++......++..++.++++++.||+ |+|+.+....+..+++.+.+.+.
T Consensus 211 ~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~ 288 (401)
T PRK11043 211 IFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLA 288 (401)
T ss_pred HHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555666677887775 5799999999888888888889999999999997 99987766655555544433322
Q ss_pred hccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHH
Q 007612 129 SYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLG 208 (596)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 208 (596)
...+. .+....++...+.+++.+...|...+...+..| +. ++++.++++.....+
T Consensus 289 ~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~~~~~ 343 (401)
T PRK11043 289 SLLSH------------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQNTLQLGL 343 (401)
T ss_pred HHhcc------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHHHHHHHHH
Confidence 11011 124445555667788888888888888777765 46 889999998888888
Q ss_pred HHHHhhhhhhhcccccchHH
Q 007612 209 SLFSNTILGYFEDEGMWALG 228 (596)
Q Consensus 209 ~~~~~~i~g~l~~~~~~~~~ 228 (596)
+.+++.+.|.+.+.......
T Consensus 344 ~~~~~~~~g~l~~~~~~~~~ 363 (401)
T PRK11043 344 CFLASLLVSALISTPLLTTG 363 (401)
T ss_pred HHHHHHHHHHccCCChhHHH
Confidence 88888888888765444433
No 208
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.80 E-value=3.6e-07 Score=92.51 Aligned_cols=166 Identities=19% Similarity=0.107 Sum_probs=133.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+..|.+.....+++..+|.++.|+|.++. +.|+|..++|++.+...+......+.+-.+++|...+|+..+.....+.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 45688888888999999999999999986 67999999999999999999999999999999876888888888889999
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
|.+.+.+. |. .+.+. ..++.|+|.|..+|....++.+..++.+. -++..++
T Consensus 287 G~~G~~~~---P~------------------~~~~l---w~~llG~G~G~~F~laL~li~~rs~~a~~-----Aa~LSgm 337 (395)
T COG2807 287 GLVGLLLA---PG------------------QLPIL---WALLLGLGQGGAFPLALTLILLRSSDAAI-----AAALSGM 337 (395)
T ss_pred HHHHHHHh---hh------------------hHHHH---HHHHHhCccchHHHHHHHHHHhhcCChHH-----HHHHHHH
Confidence 98888877 33 11222 24789999999999999999999865441 4555666
Q ss_pred HHHHHhHHHHHHhhhhhhhcccc-cchHHHHHHHHHH
Q 007612 201 FYLALNLGSLFSNTILGYFEDEG-MWALGFWVSTGSA 236 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~-~~~~~f~~~~~~~ 236 (596)
-+-...+=+.+||++.|++.|.. +|+..++..+...
T Consensus 338 aQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~ 374 (395)
T COG2807 338 AQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALAT 374 (395)
T ss_pred hhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHH
Confidence 66666677888999999998864 5777666554443
No 209
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.80 E-value=2.8e-07 Score=98.02 Aligned_cols=177 Identities=14% Similarity=0.060 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 007612 46 ILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLL 125 (596)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~ 125 (596)
.++..++...+.-....+...|+++.-|.+....+.+.+...+.-...-.+.+++-.|+ |.|++++++.+..++=..+.
T Consensus 212 Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~~l~ 290 (400)
T PF03825_consen 212 FLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRWLLY 290 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444556778898755447777777777777788888888999999997 99999999998888777777
Q ss_pred HhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHH-H
Q 007612 126 SLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYL-A 204 (596)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~ 204 (596)
+.... |. .......+....+.|+..|....+...++.+..|++. |+++.+++.. .
T Consensus 291 a~~~~-~~-----------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~~ 346 (400)
T PF03825_consen 291 AYFSD-PW-----------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSALS 346 (400)
T ss_pred HHhcC-Cc-----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHHH
Confidence 66522 11 0012223344567999999999999999999999999 9999999776 5
Q ss_pred HhHHHHHHhhhhhhhcccccch------HHHHHHHHHHHHHHHHHHhcC
Q 007612 205 LNLGSLFSNTILGYFEDEGMWA------LGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 205 ~~lg~~~~~~i~g~l~~~~~~~------~~f~~~~~~~~~~~~~~~~~~ 247 (596)
..+|..+|..++|++.+.+|-+ ..+.+.++..++..+++++..
T Consensus 347 ~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~f 395 (400)
T PF03825_consen 347 FGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILF 395 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 6899999999999999877644 344444444444444444433
No 210
>TIGR00898 2A0119 cation transport protein.
Probab=98.79 E-value=4.8e-08 Score=107.59 Aligned_cols=142 Identities=18% Similarity=0.024 Sum_probs=101.8
Q ss_pred hhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCC
Q 007612 71 VLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHS 150 (596)
Q Consensus 71 ~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (596)
.++.+.. .......+....+.++.++++||+ |||+.+.++.++..++.+++.+. ++
T Consensus 352 ~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~---~~----------------- 407 (505)
T TIGR00898 352 NLGGNIY---LDLFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFV---PV----------------- 407 (505)
T ss_pred ccCCChH---HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHc---CC-----------------
Confidence 4555533 333344566778888999999997 99999999988888877766655 21
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHH
Q 007612 151 SLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFW 230 (596)
Q Consensus 151 ~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~ 230 (596)
.......+..++.+++.+...+....+.+|.+|++. |++++++.+....+|++++|.+.+ +. ..++..+++
T Consensus 408 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~ 478 (505)
T TIGR00898 408 -DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLV 478 (505)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHH
Confidence 112334444455566666777888899999999999 999999999999999999999988 43 355666777
Q ss_pred HHHHHHHHHHHHHHh
Q 007612 231 VSTGSAFAALVLFLA 245 (596)
Q Consensus 231 ~~~~~~~~~~~~~~~ 245 (596)
+.++..+++.++.++
T Consensus 479 ~~~~~~~~~~~~~~~ 493 (505)
T TIGR00898 479 LFGGLALLAGILTLF 493 (505)
T ss_pred HHHHHHHHHHHHHHc
Confidence 666555555444433
No 211
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.74 E-value=3.6e-07 Score=97.10 Aligned_cols=70 Identities=16% Similarity=0.083 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 007612 58 FGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLS 128 (596)
Q Consensus 58 ~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~ 128 (596)
.....+.+.|+.+++|+++.+.+...+...++..++.++.|++.||+ |||+.+.++..+..++.+.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445567788888999999999999999999999999999999997 99999999988888777776665
No 212
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.74 E-value=1.3e-07 Score=103.36 Aligned_cols=165 Identities=13% Similarity=-0.033 Sum_probs=116.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.++..+...++.+...+....+.+.|.+ +...+....+.+.+...++..++.++.++++||+ |+|+.++++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~-y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFT-YVIGDADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEE-EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 56666667777777766666555554444 3333556666777777788889999999999997 999999988877666
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCcccc-ccccchhhHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDA-KEGHSKVAFFS 199 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~ 199 (596)
+.+.+.+....+ ..+.+.+++..++.|++.+...+...++++|..|.++. ..++..+..+|
T Consensus 309 ~~~~~~~~~~~~------------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s 370 (473)
T PRK10429 309 SCGVLLLMGLAA------------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYS 370 (473)
T ss_pred HHHHHHHHhccC------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHH
Confidence 655544321001 12355666667788899999899999999999874321 11111456788
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccc
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMW 225 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~ 225 (596)
+..+...+|..+++.+.|++.+..||
T Consensus 371 ~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 371 VQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999999988766655
No 213
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.73 E-value=1.7e-07 Score=94.60 Aligned_cols=173 Identities=13% Similarity=0.048 Sum_probs=111.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--C-----------------CChHHHHHHHHHHHHHHHHHhhhHHHHh
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVL--Q-----------------QNNAEAANNVSKWTGTVYIFSLVGAFLS 101 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--g-----------------~~~~~~~~~~~~~~~~~~i~~~~~G~la 101 (596)
|.-+++....+.....||+.+-......+... | .+...----..+.++.-+-+.++.+++.
T Consensus 326 kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 326 KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHH
Confidence 34455666677788888887654433332211 1 1111111222334556677889999999
Q ss_pred hhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhc
Q 007612 102 DSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGAD 181 (596)
Q Consensus 102 Dr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~ 181 (596)
||+ |||+++..+.+++.+.++++....+ ++ ....+++++|++. .+.+.+.+.+..|
T Consensus 406 erl-GRKkTMal~l~~f~iflfll~~c~~-rn------------------~~tvllf~arafi----sg~fqvaYvYtPE 461 (528)
T KOG0253|consen 406 ERL-GRKKTMALSLILFGIFLFLLTTCKT-RN------------------AYTVLLFTARAFI----SGAFQVAYVYTPE 461 (528)
T ss_pred HHh-cchhHHHHHHHHHHHHHHHHHHhcC-cc------------------hhHHHHHHHHHHH----hchheEEEEecCc
Confidence 996 9999999999999888877765522 22 1134556666654 3445677899999
Q ss_pred cCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 007612 182 QYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 182 ~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
.+|+.. |+++.|.......+|+++.|.|+ ...+..-.-.+++.. ...+++.++..+
T Consensus 462 VyPTav------RatgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~-~~~ilagIavcf 517 (528)
T KOG0253|consen 462 VYPTAV------RATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYG-ALFILAGIAVCF 517 (528)
T ss_pred ccchhh------hhcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHH-HHHHHHHHHhee
Confidence 999999 99999999999999999999888 333333333344443 333344444333
No 214
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.70 E-value=1.2e-07 Score=99.61 Aligned_cols=141 Identities=16% Similarity=0.108 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
.++...+..++....++.+..+++.|+++.+|+++.+++...+...+...++.+++|+++||+ |||+.+..+......+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 455556666666666778888999999999999999999999999999999999999999997 9988887777666665
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
..++.+... + ..+....++...+.+++.|...+...++..+.+| ++ +++..|+.
T Consensus 305 ~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~~g~~ 358 (366)
T TIGR00886 305 AFLVVLGLV-S------------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAVSGLV 358 (366)
T ss_pred HHHHHhcCC-C------------------cchHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccHHHHH
Confidence 555544311 0 0024444444555556666666677778888876 45 88999988
Q ss_pred HHHHhHHH
Q 007612 202 YLALNLGS 209 (596)
Q Consensus 202 ~~~~~lg~ 209 (596)
+...++|+
T Consensus 359 ~~~~~~g~ 366 (366)
T TIGR00886 359 GAIGNLGG 366 (366)
T ss_pred HHhccCCC
Confidence 87777663
No 215
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.66 E-value=1.5e-05 Score=84.88 Aligned_cols=100 Identities=9% Similarity=0.013 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 007612 83 VSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIY 162 (596)
Q Consensus 83 ~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 162 (596)
.++......+.+++++.+.|+. |.|..+.++......-.+.+.+. |.+.++.+-+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~------------------------N~y~~yfssa 110 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFP------------------------NSYYLYFSSA 110 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhc------------------------chHHHHHHHH
Confidence 5666777788999999999996 99999999987766655544442 3677889999
Q ss_pred HHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHh
Q 007612 163 FVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSN 213 (596)
Q Consensus 163 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~ 213 (596)
+.|+|.+.++.....++++..+++. +.+..++.......+.++|.
T Consensus 111 llG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Gg 155 (461)
T KOG3098|consen 111 LLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGG 155 (461)
T ss_pred HhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999998887 66666665555555555443
No 216
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.65 E-value=1.8e-06 Score=91.80 Aligned_cols=143 Identities=8% Similarity=0.027 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccC
Q 007612 57 FFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRP 136 (596)
Q Consensus 57 ~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (596)
........+.|+++.+|.++.+.++.......+..++.++.+++.||+ |++.... .....++.+.+.......
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~---- 295 (394)
T PRK11652 223 IAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQS--VICCLLAGLLMWIPGWFG---- 295 (394)
T ss_pred HHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHhc----
Confidence 333445567788888999999999988888888888999999999996 7433322 222222222211110000
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhh
Q 007612 137 RGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTIL 216 (596)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~ 216 (596)
..+.+.++.+.++.+++.+...|...+...+.+| +. +++..++.+...++|+.+++.++
T Consensus 296 --------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~lg~~~~~~~~ 354 (394)
T PRK11652 296 --------------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YL------AGTAGALLGGLQNIGSGLAALLS 354 (394)
T ss_pred --------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cc------chHHHHHHHHHHHHHHHHHHHHH
Confidence 0124556677788889999999999999999886 45 78888999988999999999999
Q ss_pred hhhcccccchH
Q 007612 217 GYFEDEGMWAL 227 (596)
Q Consensus 217 g~l~~~~~~~~ 227 (596)
+++.+...+..
T Consensus 355 ~~~~~~~~~~~ 365 (394)
T PRK11652 355 AMLPQTGQFSL 365 (394)
T ss_pred HHccCCchHHH
Confidence 98876544443
No 217
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.64 E-value=5.3e-07 Score=95.41 Aligned_cols=142 Identities=18% Similarity=0.227 Sum_probs=104.5
Q ss_pred ccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceee
Q 007612 391 MSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLS 470 (596)
Q Consensus 391 ~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (596)
+...+-.+-+++-++.. ++.+|.+ +.+.+..|+.+.++-++.+.+++ +
T Consensus 411 ~~a~~~~gEI~~~ffs~----klI~kiG--------Hv~v~~lgLa~~~~Rf~~~S~L~--------------------n 458 (618)
T KOG3762|consen 411 VSALCHAGEILFYFFSF----KLIEKIG--------HVNVMYLGLACNVGRFLYYSYLQ--------------------N 458 (618)
T ss_pred hhhhhccchHHHHHHHH----HHHHHhc--------ccceeeehhhHHHHHHHHHHHhc--------------------C
Confidence 33334444444444444 3445554 55678899999999999888764 7
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCC
Q 007612 471 IFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTS-ISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNK 549 (596)
Q Consensus 471 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~-~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~ 549 (596)
+|..++.-++.|+..+..+.+.-+|+...+|++++.+++|+.... -.+|-.+|.++.|.+....
T Consensus 459 ~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f--------------- 523 (618)
T KOG3762|consen 459 PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF--------------- 523 (618)
T ss_pred chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee---------------
Confidence 888888889999999999999999999999999999999998766 4678888888877665422
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhccccccc
Q 007612 550 GHLDRFYFLLAGLTTVDFVVYIACAKWYKCI 580 (596)
Q Consensus 550 ~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~ 580 (596)
+-...|+..++.+++.++++..+.+..+++
T Consensus 524 -g~~ttf~~~giAcl~~l~~~~~iq~~l~~~ 553 (618)
T KOG3762|consen 524 -GARTTFRIFGIACLVTLALFISIQLLLKRR 553 (618)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 224578888888888777776665554443
No 218
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.62 E-value=8.9e-07 Score=94.94 Aligned_cols=162 Identities=11% Similarity=-0.026 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVL-QQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l-g~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
++..++..++......++.++++.|+.+.. +.+...++...+.+..+..++.+++|+++||+ ++||++.++.++..+.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 344444555555555567788999986532 45555556667777788899999999999996 9999998888777777
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.++..+. +. .. ......+.|++.+..+|+..++..+..+++. +.....+
T Consensus 313 ~ll~~~~---~~--------------------~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~s~~l- 361 (410)
T TIGR00885 313 CLGSIFA---GG--------------------HV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYGAAGL- 361 (410)
T ss_pred HHHHHHc---CC--------------------hH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhhHHHH-
Confidence 6666654 11 22 2455567788888888999999999998766 3223332
Q ss_pred HHHHhHHHHHHhhhhhhhcccc------cchHHHHHHHHHHH
Q 007612 202 YLALNLGSLFSNTILGYFEDEG------MWALGFWVSTGSAF 237 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l~~~~------~~~~~f~~~~~~~~ 237 (596)
.++ .+|+.+.|.+.|++.|.. +.+..|++...+.+
T Consensus 362 ~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 362 VMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 223 399999999999999853 57888887665543
No 219
>PRK09669 putative symporter YagG; Provisional
Probab=98.62 E-value=5.6e-07 Score=97.55 Aligned_cols=158 Identities=16% Similarity=0.071 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFL-TRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
++.++...++.......... +..|+ +..++ ++...+.+.....+...++.++.++++||+ |||+.+.++.++.++.
T Consensus 231 ~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~ 307 (444)
T PRK09669 231 WRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVIL 307 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 34444444443333332223 33444 33333 333344555556677778889999999997 9999998887665544
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCcccc--ccccchhhHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDA--KEGHSKVAFFS 199 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~ 199 (596)
.+.+.+. +. ++...+++..++.|++.+...+...++++|..+.++. ++++ .+..++
T Consensus 308 ~~~~~~~---~~------------------~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~-~g~~~s 365 (444)
T PRK09669 308 SALIFFI---PP------------------SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRL-DGLVFS 365 (444)
T ss_pred HHHHHHh---Cc------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCc-chHHHH
Confidence 3333322 11 2356677777889999999999999999999874332 2221 467788
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccc
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMW 225 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~ 225 (596)
.+.+...+|..+|+.++|++.+..||
T Consensus 366 ~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 366 TNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999999988776666
No 220
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.61 E-value=1.4e-06 Score=77.20 Aligned_cols=133 Identities=16% Similarity=0.129 Sum_probs=95.4
Q ss_pred chhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHH
Q 007612 395 DILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQ 474 (596)
Q Consensus 395 ~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (596)
..++.++..++.+++.+ |.+ +++.+..+..+..++.+..... .+.+..
T Consensus 7 ~~~~~~~~~~~~g~~~d----~~g--------~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~ 54 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTD----RFG--------RKPVLLVGLFIFVLSTAMFALS--------------------SNITVL 54 (141)
T ss_pred ehhHHHHHHhhHHHHHh----hcc--------hhHHHHHHHHHHHHHHHHHHHh--------------------ccHHHH
Confidence 34556666667765544 433 2334666666666666555442 245566
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhH
Q 007612 475 VPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDR 554 (596)
Q Consensus 475 ~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 554 (596)
....++.+++.+...+..+.++.|.+|++.|++++|+.++...+|..+++.+.+.+.+ ..+++.
T Consensus 55 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------------~~~~~~ 118 (141)
T TIGR00880 55 IIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQ----------------FLGWRA 118 (141)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc----------------ccchHH
Confidence 6777889999999999999999999999999999999999999999999999887653 123456
Q ss_pred HHHHHHHHHHHHHHHHHhhcc
Q 007612 555 FYFLLAGLTTVDFVVYIACAK 575 (596)
Q Consensus 555 ~f~~~a~i~~i~~~~~~~~~~ 575 (596)
.|++.+.+.++..+..++..+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 119 PFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred HHHHHHHHHHHHHHHHhhcCC
Confidence 777777777776666655443
No 221
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.59 E-value=1.1e-06 Score=90.48 Aligned_cols=157 Identities=19% Similarity=0.160 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 42 AGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
.+++..+.+++.-...-++.++++.|+.+..|.+..+++..++.+..+..++..++-++..|+ ...|.+.+..++..+.
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill 315 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILL 315 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 344444444554444556778999999988999999999999999999999999999999996 8889988887666665
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
++...++. +.. .+.+.++.|+.++..+|++.++..+..|++. +..|..
T Consensus 316 ~~~~~l~~-----------------------g~v-~~~~l~~ig~F~simfPTIfslal~~l~~~t--------s~~s~~ 363 (422)
T COG0738 316 LLAVALIG-----------------------GVV-ALYALFLIGLFNSIMFPTIFSLALKNLGEHT--------SVGSGL 363 (422)
T ss_pred HHHHHHhc-----------------------ChH-HHHHHHHHHHHhHHHHHHHHHHHHhccCccc--------ccccee
Confidence 55555551 122 3344567889999999999999999999555 222222
Q ss_pred HHHHhHHHHHHhhhhhhhcccccchHHHHH
Q 007612 202 YLALNLGSLFSNTILGYFEDEGMWALGFWV 231 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~ 231 (596)
-....+|+++-|++.|++.|..|-...+..
T Consensus 364 l~maivGGAiiP~l~G~i~d~~g~~~~~~~ 393 (422)
T COG0738 364 LVMAIVGGAIIPPLQGVIADMFGIQLTFLI 393 (422)
T ss_pred eeeheecchHHHHHHHHHHHhhhhHHHHHH
Confidence 234568999999999999999888877763
No 222
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.56 E-value=2.6e-06 Score=88.38 Aligned_cols=167 Identities=23% Similarity=0.247 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhc
Q 007612 51 GLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSY 130 (596)
Q Consensus 51 ~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~ 130 (596)
+..+..+++=-..+=+|--+.+|++..|...+...+..+..++..+.|++..|..+++++-.+++.+.+++..+..++..
T Consensus 218 ~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~ 297 (403)
T PF03209_consen 218 FLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP 297 (403)
T ss_pred HHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444333455678888999999999999999999999999999999886568899888999988888887777643
Q ss_pred cccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHH
Q 007612 131 LFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSL 210 (596)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 210 (596)
. .+.+.+..+.+++|++.|.+.....+.+.|..++++ .+..+|.+...-.++..
T Consensus 298 ~--------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~G 351 (403)
T PF03209_consen 298 L--------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIARG 351 (403)
T ss_pred c--------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHHH
Confidence 2 237889999999999999999999999999998888 78999999998888888
Q ss_pred HHhhhhhhhccc----------ccchHHHHHHHHHHHHHHHHH
Q 007612 211 FSNTILGYFEDE----------GMWALGFWVSTGSAFAALVLF 243 (596)
Q Consensus 211 ~~~~i~g~l~~~----------~~~~~~f~~~~~~~~~~~~~~ 243 (596)
+|..++|.+.|. .+|..+|.+-++..++++.+.
T Consensus 352 lg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 352 LGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 888888876542 346667776666655555443
No 223
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.48 E-value=4.8e-06 Score=82.11 Aligned_cols=170 Identities=14% Similarity=0.114 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhcc
Q 007612 52 LATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYL 131 (596)
Q Consensus 52 ~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~ 131 (596)
..+.+.|.+-.+- +.+++.+|+|..|...+.....++..++ ++.|.+.|++ |.+.++++|.+...+|..++.++-.
T Consensus 13 ~~~Gt~Y~Fs~yS-~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~- 88 (250)
T PF06813_consen 13 LCSGTTYTFSAYS-PQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVS- 88 (250)
T ss_pred HhcCcccchhhhh-HHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3334556565444 4688999999999999999999998875 7889999997 9999999999999999988877622
Q ss_pred ccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHH
Q 007612 132 FLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLF 211 (596)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~ 211 (596)
+...+...+.+.+..++.+.+.+.+..++.....+.|| ++ ||++.++.-....+++.+
T Consensus 89 ---------------~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~------RG~vvgilk~~~GLSaai 146 (250)
T PF06813_consen 89 ---------------GRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RS------RGTVVGILKGFFGLSAAI 146 (250)
T ss_pred ---------------CccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cc------cCceehhhhHHHHhHHHH
Confidence 11222346677777777777766666776677778897 46 889999877777676665
Q ss_pred HhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcC
Q 007612 212 SNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 212 ~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
=..+-..+.+.-.-...+.......++.++...+.+
T Consensus 147 ~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 147 FTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 544444443332223333333333444444444433
No 224
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.45 E-value=3.8e-06 Score=91.87 Aligned_cols=186 Identities=12% Similarity=-0.013 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHH----HHHHHHHHHHHHHHHhhhHH----HHhhhccCchHHH--H
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAE----AANNVSKWTGTVYIFSLVGA----FLSDSYWGRFKTC--A 112 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~----~~~~~~~~~~~~~i~~~~~G----~laDr~~Gr~~~l--~ 112 (596)
++.+++........+.-..+.++.|..+..+.+... .+++.+...+...+.+++.. ++.||-.+.+... .
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 333444444444555455566777776654443222 56777777777777776655 4555411333433 6
Q ss_pred HHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCcccccccc
Q 007612 113 IFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGH 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 192 (596)
+|.++.+++...++++... ...+...+.+.+++..++.++|.....|...+++.+..|++.
T Consensus 354 ~G~~l~~~~~~~~~~~~~~--------------~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~----- 414 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWF--------------ADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL----- 414 (475)
T ss_pred HHHHHHHHHHHHHHHHHhh--------------cCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH-----
Confidence 7777777777776653110 011123568889999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCc
Q 007612 193 SKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTT 248 (596)
Q Consensus 193 ~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 248 (596)
|++.++++.....+|..+++.+.....+..+|...|...++.+++..+++++..|
T Consensus 415 -~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 415 -MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988887777777888777766655555554444333
No 225
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.40 E-value=1.2e-07 Score=98.87 Aligned_cols=146 Identities=12% Similarity=0.084 Sum_probs=114.6
Q ss_pred ccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCce
Q 007612 389 ASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASS 468 (596)
Q Consensus 389 ~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (596)
+.++....+...++.|+.+.+.+|+ + +.+.+.+|..+..++.+..++..
T Consensus 71 Gll~~vf~v~~~i~sPl~gyLadry----N--------R~~v~~vG~~iW~~Av~~~~fs~------------------- 119 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYLADRY----N--------RKRVIAVGIFIWTLAVFASGFSN------------------- 119 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhc----C--------cceEEeeHHHHHHHHHHHHHHHH-------------------
Confidence 4455555677778889998775544 3 33458999999999988887642
Q ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCC
Q 007612 469 LSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLN 548 (596)
Q Consensus 469 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~ 548 (596)
..|.+.+.-.+.|+|++...|..+++++|.+|++.|+++.+++++....|..+|......+.+.
T Consensus 120 -~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~--------------- 183 (493)
T KOG1330|consen 120 -HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL--------------- 183 (493)
T ss_pred -HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC---------------
Confidence 4566667779999999999999999999999999999999999999999998887666655432
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhhcccccccc
Q 007612 549 KGHLDRFYFLLAGLTTVDFVVYIACAKWYKCIE 581 (596)
Q Consensus 549 ~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~~ 581 (596)
.+++++.|+..++++++..++.+++.++..++.
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga 216 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPERGA 216 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCccccc
Confidence 223577899999999999888888777765443
No 226
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.39 E-value=2.1e-06 Score=89.42 Aligned_cols=166 Identities=16% Similarity=0.108 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhc---cCchHHHHH-HHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSY---WGRFKTCAI-FQG 116 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~~l~~-~~~ 116 (596)
+.++.+..+.++..++.-.=.+++++|++ .+|.+.+-.+.+-....+...+.+|+.|..+||. +||||.++. +..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 56677777777777776666788899985 7899998888888888889999999999999983 377776554 455
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
..+++.++.+++. ++...-|.|+.+| ........++++..+.=+.+-..+..+-++.+|....++ +-+
T Consensus 111 ~i~~~l~Lig~aa---Dig~~lgd~~~~~---~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~------~~~ 178 (498)
T KOG0637|consen 111 LIAVSLFLIGYAA---DIGLLLGDNERKP---VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA------KKT 178 (498)
T ss_pred HHHHHHhhhhhHh---hhhHHhcCCcccc---cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh------hhh
Confidence 6777888887773 3322223333333 233456667777777778887888999999999987666 333
Q ss_pred -HHHHHHHHHhHHHHHHhhhhhhh
Q 007612 197 -FFSYFYLALNLGSLFSNTILGYF 219 (596)
Q Consensus 197 -~~~~~~~~~~lg~~~~~~i~g~l 219 (596)
+.+++...+.+|+.+|..++++.
T Consensus 179 ~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 179 RANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred ccchhHHHHHHhcceeeeeccccc
Confidence 88889999999999998777644
No 227
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.37 E-value=1.6e-05 Score=85.41 Aligned_cols=169 Identities=14% Similarity=-0.011 Sum_probs=110.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
|.++..++..++....++.+..+.|.++++.+|.+..+.++.......+..++..+.+++.++. ++++.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 5667777777777778888888889999999999999999988777788888888888776554 454544333333344
Q ss_pred HHHHHHhhhc-cccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 121 GLVLLSLSSY-LFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 121 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
+..++..... .+ ++....+++.++.++|.+...|+.....- .+.+.. ++++.+
T Consensus 297 g~~l~~~~~~~~~-------------------~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~-----~G~a~a 350 (413)
T PRK15403 297 GLALLIVGNLLWP-------------------HVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP-----KGTVSA 350 (413)
T ss_pred HHHHHHHHHHHcc-------------------ccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC-----CcHHHH
Confidence 4433332210 01 12333566777888888888777775332 222211 667777
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHH
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAF 237 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~ 237 (596)
+++.....+..+++...+++.+. +-.++|....++..
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 387 (413)
T PRK15403 351 SLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHH
Confidence 87777777788888888887654 44566655544433
No 228
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.34 E-value=1.7e-05 Score=85.99 Aligned_cols=208 Identities=15% Similarity=-0.009 Sum_probs=142.9
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChH------H----HHHHHHHHHHHHHHHhhhHHHHhh
Q 007612 34 RAKSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTR-VLQQNNA------E----AANNVSKWTGTVYIFSLVGAFLSD 102 (596)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~~~~------~----~~~~~~~~~~~~~i~~~~~G~laD 102 (596)
+..+..|+.++.++..+++..++.+.+..+...|+.+ .++-++. + ..+....+.+...+.+++--++.+
T Consensus 251 ~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~ 330 (477)
T TIGR01301 251 GAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCR 330 (477)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999888888864 3443321 1 223344445555566777788899
Q ss_pred hccC-chHHHHHHHHHHHHHHHHHHhhhcccc-ccCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHhccccccchhhhh
Q 007612 103 SYWG-RFKTCAIFQGIFVIGLVLLSLSSYLFL-IRPRGCGNELTPCGTHSS-LEICLFYLSIYFVALGNGGYQPNIATFG 179 (596)
Q Consensus 103 r~~G-r~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~g~g~g~~~~~~~~~~ 179 (596)
|+ | ||++..++.++.++++....+.++.++ ..+ .|.|-.....+ ......++...+.|+..+.......+++
T Consensus 331 ~~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~ 405 (477)
T TIGR01301 331 GW-GAGKRLWGIVNIILAICLAATVLVTYVAKNSRY----YDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALA 405 (477)
T ss_pred Hh-ccchhHHHHHHHHHHHHHHHHHHHHhhhhcccc----ccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHH
Confidence 96 8 467778898888888887776533111 000 00000000111 1135666777789999999999999999
Q ss_pred hccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccccc--chHHHHHHHHHHHHHHHHHHhcCcce
Q 007612 180 ADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGM--WALGFWVSTGSAFAALVLFLAGTTRY 250 (596)
Q Consensus 180 ~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~--~~~~f~~~~~~~~~~~~~~~~~~~~~ 250 (596)
++..+++.++ .|..+|++|....+...+.....|.+.+..| -.+.+.+.++.++++.+..+...|+.
T Consensus 406 s~~~~~~~~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 406 SIRSSNLGAG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred HHHccccCCC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999864411 6899999999999999999887777544333 45677777777777777666666553
No 229
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.33 E-value=0.00011 Score=77.28 Aligned_cols=156 Identities=17% Similarity=0.135 Sum_probs=112.4
Q ss_pred HHHHHHHHHh-hCCChHHHH-HHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCC
Q 007612 62 VNLVLFLTRV-LQQNNAEAA-NNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGC 139 (596)
Q Consensus 62 ~~l~~yl~~~-lg~~~~~~~-~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (596)
+++..|+.+. .|++..|.. -+.-..+-......++...+.|.. |-|++++++.+...+...++.+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~---------- 92 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGT---------- 92 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHC----------
Confidence 5677888876 899888864 344445556667778889999985 999999999888888877777762
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhh
Q 007612 140 GNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYF 219 (596)
Q Consensus 140 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l 219 (596)
+...+-+.-++.|++.+. -.+..+++-...|+++ --++.++...+.-+|-.++..++-.+
T Consensus 93 -------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQll 152 (412)
T PF01770_consen 93 -------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQLL 152 (412)
T ss_pred -------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 366677778888887766 3566677777777766 55777777777777777777666655
Q ss_pred cc--cccchHHHHHHHHHHHHHHHHHHhcCc
Q 007612 220 ED--EGMWALGFWVSTGSAFAALVLFLAGTT 248 (596)
Q Consensus 220 ~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~ 248 (596)
.. ..++...+++......+++++.+++++
T Consensus 153 vs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 153 VSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 44 445667777777666666666555543
No 230
>PRK11462 putative transporter; Provisional
Probab=98.32 E-value=2.7e-05 Score=84.77 Aligned_cols=158 Identities=15% Similarity=0.128 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHH
Q 007612 45 IILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVL 124 (596)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~ 124 (596)
.++...+...............|.+..+| ++...+.+...+.++..++.+++++++||+ |+|+.+..+..+.++..++
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~ 309 (460)
T PRK11462 232 IVGLLTIFNILAVCVRGGAMMYYVTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLA 309 (460)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHH
Confidence 33333334433333333333333333344 334445667777888889999999999997 9988876554443333333
Q ss_pred HHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCcccccccc-chhhHHHHHHH
Q 007612 125 LSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGH-SKVAFFSYFYL 203 (596)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~~ 203 (596)
+.+. +. .+...+++..++.|++.+...+...++++|..+.++-++.+ .-+..++....
T Consensus 310 ~~~~---~~------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f 368 (460)
T PRK11462 310 MFFV---PM------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLF 368 (460)
T ss_pred HHHh---ch------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHH
Confidence 3322 11 12333444556667777777777788889887743211111 12444566667
Q ss_pred HHhHHHHHHhhhhhhhcccccc
Q 007612 204 ALNLGSLFSNTILGYFEDEGMW 225 (596)
Q Consensus 204 ~~~lg~~~~~~i~g~l~~~~~~ 225 (596)
...+|..+|+.++|++.+..||
T Consensus 369 ~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 369 VLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 8888999998888877655454
No 231
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.27 E-value=3.1e-05 Score=77.39 Aligned_cols=145 Identities=23% Similarity=0.286 Sum_probs=108.6
Q ss_pred HHHHHHHHHhhCCCh--HHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCC
Q 007612 62 VNLVLFLTRVLQQNN--AEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGC 139 (596)
Q Consensus 62 ~~l~~yl~~~lg~~~--~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (596)
...+.+. ...+.+. ...++..+.+.+...++.++.|.++||+ |||+.+..+.....++.++..+...
T Consensus 23 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------- 91 (338)
T COG0477 23 PALPLLL-STLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN--------- 91 (338)
T ss_pred HHHHHHH-HHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc---------
Confidence 3444443 3445444 4778999999999999999999999997 9998888887665555555555411
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCc-cccccccchhhHHHHHHH-HHhHHHHHHhhhhh
Q 007612 140 GNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDE-EDAKEGHSKVAFFSYFYL-ALNLGSLFSNTILG 217 (596)
Q Consensus 140 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~lg~~~~~~i~g 217 (596)
.....+++.|...|++.+...+...+++.+.+|+ +. |+...+.... ...+|..++|.+++
T Consensus 92 ------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 92 ------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred ------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2377888899999999999999999999999987 45 8888888777 57888888887777
Q ss_pred hhccc--ccchHHHHHHHHH
Q 007612 218 YFEDE--GMWALGFWVSTGS 235 (596)
Q Consensus 218 ~l~~~--~~~~~~f~~~~~~ 235 (596)
.+... .+|++.|.+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 154 LLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHhcchHHHHHHHHHH
Confidence 66543 5788855554433
No 232
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.24 E-value=2.8e-05 Score=82.89 Aligned_cols=159 Identities=19% Similarity=0.167 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 007612 44 IIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLV 123 (596)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~ 123 (596)
...++..++....+-...+...-|.+..+|.+.............+..++.++..++++|+ |+|+++.++.++.+++.+
T Consensus 239 ~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~~~ 317 (467)
T COG2211 239 LLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVGYL 317 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHHHH
Confidence 3333344444444333334445556667888888888888888888888899999999997 999999999999999999
Q ss_pred HHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCcccc--ccccchhhHHHHH
Q 007612 124 LLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDA--KEGHSKVAFFSYF 201 (596)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~~ 201 (596)
++.+. +. .+..++++..++.++|.+...+..+++++|..+..+- +.++ -|..++.+
T Consensus 318 ~~~f~---~~------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~-eGi~~s~~ 375 (467)
T COG2211 318 LLYFT---PA------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRR-EGIVYSGM 375 (467)
T ss_pred HHHhh---cC------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCc-hhhHHHHH
Confidence 88887 21 4578888888999999999999999999999875432 2222 24555666
Q ss_pred HHHHhHHHHHHhhhhhhhcccccc
Q 007612 202 YLALNLGSLFSNTILGYFEDEGMW 225 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l~~~~~~ 225 (596)
....=+|.+++..+.|++....||
T Consensus 376 tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 376 TFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 666677777777666666554443
No 233
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.19 E-value=1.7e-05 Score=86.95 Aligned_cols=147 Identities=10% Similarity=0.031 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCChH----HHHHHHHHHHHHHHHHhhhHHHHhhhccCchHH-------HHHHHHHHHHH
Q 007612 53 ATLAFFGVGVNLVLFLTRVLQQNNA----EAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKT-------CAIFQGIFVIG 121 (596)
Q Consensus 53 ~~~~~~~~~~~l~~yl~~~lg~~~~----~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~-------l~~~~~~~~~~ 121 (596)
....+......++.|.++..+.+.. ...++.+...+...+..++.|++.||. |+|+. +.+|.++.+++
T Consensus 281 f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~~ 359 (489)
T PRK10207 281 FYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSLG 359 (489)
T ss_pred HHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHHH
Confidence 3344444446677777643332211 124555555566778888899999997 88873 66777777766
Q ss_pred HHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 122 LVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.+.++....... + .....+.+.+...-++.|+|.++..|...+++.+..|++. ++.+++++
T Consensus 360 ~~~~~~~~~~~~--------~-----~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~g~~~g~~ 420 (489)
T PRK10207 360 FLTAAAAGMWFA--------D-----AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------MGFILGMW 420 (489)
T ss_pred HHHHHHHHHhhc--------C-----CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------HHHHHHHH
Confidence 654432100000 0 0011346667777889999999999999999999999999 99999999
Q ss_pred HHHHhHHHHHHhhhhhhh
Q 007612 202 YLALNLGSLFSNTILGYF 219 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g~l 219 (596)
+...++|..+|..++...
T Consensus 421 ~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999988777654
No 234
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.18 E-value=4.5e-05 Score=84.00 Aligned_cols=177 Identities=12% Similarity=0.008 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hhCCCh------HHHHHHHHHHHHHHHHHhhhH----HHHhhhccCchHHHHHHH
Q 007612 48 LNQGLATLAFFGVGVNLVLFLTR--VLQQNN------AEAANNVSKWTGTVYIFSLVG----AFLSDSYWGRFKTCAIFQ 115 (596)
Q Consensus 48 ~~~~~~~~~~~~~~~~l~~yl~~--~lg~~~------~~~~~~~~~~~~~~~i~~~~~----G~laDr~~Gr~~~l~~~~ 115 (596)
+..+.....+|.+....+.++.. ..+.+. ...++..+...+...+..++. +++.||+ +..+.+.++.
T Consensus 279 ~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~ 357 (500)
T PRK09584 279 FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGM 357 (500)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHH
Confidence 33445566677777777766553 111221 124556666666666666666 5666664 6667888899
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 116 GIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
++.+++.+.+.+.....+ .+...+.+.+....++.++|.++..|...+++.+..|++. |+
T Consensus 358 ~l~~l~f~~l~~~~~~~~--------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg 417 (500)
T PRK09584 358 VLCSGAFLVLPLGAKFAN--------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MG 417 (500)
T ss_pred HHHHHHHHHHHHHHHhcC--------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HH
Confidence 999999888777633111 1112345678888999999999999999999999999999 99
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhhc----------ccccchHHHHHHHHHHHHHHHHHHh
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYFE----------DEGMWALGFWVSTGSAFAALVLFLA 245 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l~----------~~~~~~~~f~~~~~~~~~~~~~~~~ 245 (596)
+.+|.+.....+|..++..+.+... ...++...|...++..++..+++++
T Consensus 418 ~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 418 FIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888788777766654321 0123566776655544433333333
No 235
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.17 E-value=4.7e-06 Score=85.39 Aligned_cols=145 Identities=14% Similarity=0.116 Sum_probs=115.7
Q ss_pred ccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCce
Q 007612 389 ASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASS 468 (596)
Q Consensus 389 ~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (596)
+.+.....+..++..|+.+.+.+++..|. -+.+|++++.++.+++++.+
T Consensus 109 G~LFaskA~~qllvnp~~G~l~~~iGy~i------------pm~~Gl~vmf~sTilFafg~------------------- 157 (464)
T KOG3764|consen 109 GLLFASKALVQLLVNPFFGNLIDRIGYKI------------PMVAGLFVMFLSTILFAFGN------------------- 157 (464)
T ss_pred hHHHHHHHHHHHHhcccchhhHHHhcccc------------HHHHHHHHHHHHHHHHHHcc-------------------
Confidence 44444455666677777775555444443 49999999999999999853
Q ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCC
Q 007612 469 LSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGL-KSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNL 547 (596)
Q Consensus 469 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~-rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~ 547 (596)
+.+.+++.-.+.|+|.++..+...+++++.+|++. ||+++|+...+..+|..+||.+.|.+.+..
T Consensus 158 -sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~------------- 223 (464)
T KOG3764|consen 158 -SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA------------- 223 (464)
T ss_pred -hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-------------
Confidence 56678888999999999999999999999999765 799999999999999999999999887643
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhcccccccc
Q 007612 548 NKGHLDRFYFLLAGLTTVDFVVYIACAKWYKCIE 581 (596)
Q Consensus 548 ~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~~ 581 (596)
+++..|.+++.++++...+-+++.+.++..+
T Consensus 224 ---Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 224 ---GKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred ---CCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 3445799999999999988888776655443
No 236
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.15 E-value=2.1e-08 Score=108.73 Aligned_cols=187 Identities=15% Similarity=0.066 Sum_probs=111.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.+...+..........+....+...++.+..+.++. -.......+...++.+++.++.||+ |||++++++..+.++
T Consensus 252 ~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~ 328 (451)
T PF00083_consen 252 KRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAI 328 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-ccccccccccccccc
Confidence 3445555555555444433344444445556676666 2333344556667777888999997 999999999888777
Q ss_pred HHHHHH-hhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHH
Q 007612 121 GLVLLS-LSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFS 199 (596)
Q Consensus 121 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 199 (596)
+.+.++ .....++ ..+..+...+............+..+....+.+|.+|++. |.++.+
T Consensus 329 ~~~~~~~~~~~~~~--------------~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~ 388 (451)
T PF00083_consen 329 CSLILGIIFFLGVS--------------SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIG 388 (451)
T ss_pred cccccccccccccc--------------cccccccccceeeeeccccccccccccccccccccccccc------cccccc
Confidence 776665 1100011 0000011111111111112222445777788999999999 999999
Q ss_pred HHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcce
Q 007612 200 YFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTRY 250 (596)
Q Consensus 200 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 250 (596)
+.+....+++.+++.+...+.+..+-...|.+.++..++..+..++..|+.
T Consensus 389 ~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET 439 (451)
T PF00083_consen 389 LSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPET 439 (451)
T ss_pred cccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeC
Confidence 988888899999998888887766634455555554444444444444443
No 237
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.13 E-value=9.3e-05 Score=71.87 Aligned_cols=93 Identities=11% Similarity=0.210 Sum_probs=69.1
Q ss_pred HHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCC
Q 007612 67 FLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPC 146 (596)
Q Consensus 67 yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (596)
|+.+.+|+...+.+.+.........++..+.|-++||- |||+.++..++..+++ ++..-
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYiLs----CiTKh---------------- 120 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYILS----CITKH---------------- 120 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHHHH----HHhhc----------------
Confidence 45567888888888888777777888888899999996 9999887765544443 33322
Q ss_pred CCCCchhHHHHHHHHHHHHHhccccccchhhh-hhccCC
Q 007612 147 GTHSSLEICLFYLSIYFVALGNGGYQPNIATF-GADQYD 184 (596)
Q Consensus 147 ~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~-~~~~~~ 184 (596)
++++-.++++|++.|+..+..+++--+. ++|+.+
T Consensus 121 ----SpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne 155 (454)
T KOG4332|consen 121 ----SPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE 155 (454)
T ss_pred ----CCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 2347789999999999998887776554 455553
No 238
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.12 E-value=9.3e-06 Score=88.19 Aligned_cols=165 Identities=13% Similarity=0.077 Sum_probs=108.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhc---cCchHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSY---WGRFKTCAIFQGI 117 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~~l~~~~~~ 117 (596)
..+|..++..++.....|++..|+|.|+++..|++..+++.+...+.++..++.+++|+++||. ..+|........+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999986779999999999999999999999999999993 1555555555444
Q ss_pred HHH-HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 118 FVI-GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 118 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
..+ +.+.+..... ......+.+....+.+...+.......+....+.+ |.+
T Consensus 353 ~~~~g~~~l~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k-----~~~ 404 (495)
T KOG2533|consen 353 YAIIGAISLLAAAV-----------------------LPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK-----ALT 404 (495)
T ss_pred HHHHHHHHHHhhcc-----------------------chHHhHHHHhcchhhHHHHHHHHhhccccccchHH-----hHH
Confidence 333 3233332211 22222222333344444455566666666654441 445
Q ss_pred HHHHHHHHHhHHHHHHhhh-hhhhcccccchHHHHHHH
Q 007612 197 FFSYFYLALNLGSLFSNTI-LGYFEDEGMWALGFWVST 233 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i-~g~l~~~~~~~~~f~~~~ 233 (596)
..+.+..+.+.++.++|.+ .+.....++|...|....
T Consensus 405 ~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 405 TVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred HHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 5555555665555555443 344445578888885444
No 239
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.05 E-value=2.6e-05 Score=88.20 Aligned_cols=168 Identities=14% Similarity=0.192 Sum_probs=108.1
Q ss_pred CccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHh--hhhhhhcc-------
Q 007612 388 PASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVEC--YRLKYAKT------- 458 (596)
Q Consensus 388 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~--~~~~~~~~------- 458 (596)
.+.+.+.+.++..+..++.+++. +|.+ +++.+.+|.++++++.+++++..- .+|+....
T Consensus 70 ~G~i~s~~~i~~~~~~i~v~~~~----~r~~--------r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~ 137 (633)
T TIGR00805 70 SGLINGSYEIGNLLLIIFVSYFG----TKLH--------RPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNL 137 (633)
T ss_pred ceeeeehhhHHHHHHHHHHHHhh----cccC--------cceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccc
Confidence 45566666777777777777554 4443 233488888888888887765431 12211100
Q ss_pred ------cC--------------CCCCCCc--eeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHH
Q 007612 459 ------EC--------------KHCEGAS--SLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSI 516 (596)
Q Consensus 459 ------~~--------------~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~ 516 (596)
-| ..|.... ...+..+++.-++.|+|.+...+...+++.|.+|++.|+.+.|+.+...
T Consensus 138 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~ 217 (633)
T TIGR00805 138 SSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIA 217 (633)
T ss_pred cccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHH
Confidence 00 0000000 1234556678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccc------------CCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Q 007612 517 SLGNYVSSLLLTMVMKISTE------------DHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIAC 573 (596)
Q Consensus 517 ~lg~~lg~~l~~~i~~~~~~------------~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~ 573 (596)
.+|..+|+.+.+.+.+...+ +.++.| .+++...|++.+++.++.++.++++
T Consensus 218 ~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprW------iGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 218 VFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRW------IGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccH------HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999987754311 011111 1234455666677776665554443
No 240
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.04 E-value=0.00076 Score=70.90 Aligned_cols=61 Identities=21% Similarity=0.140 Sum_probs=51.3
Q ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 470 SIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMV 530 (596)
Q Consensus 470 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i 530 (596)
+.|.+++..+..|+..+..+...+..+.+..|++.|..++|.....-.+|..++..+.-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4566667778889999999998899999999999999999999988888888877665543
No 241
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.01 E-value=1.8e-05 Score=86.35 Aligned_cols=136 Identities=7% Similarity=-0.114 Sum_probs=106.3
Q ss_pred HHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCC
Q 007612 69 TRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGT 148 (596)
Q Consensus 69 ~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (596)
++.+|+++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++.+++.....+..+..++. .+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~----------~g- 347 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLA----------FG- 347 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccc----------cC-
Confidence 457899999999999999999999999999999996 999999999888877765543221111100 00
Q ss_pred CCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhccccc
Q 007612 149 HSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGM 224 (596)
Q Consensus 149 ~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~ 224 (596)
. .+...++...++.+++.+........++.+..|++. +++.++++....++|..+++.+++++.++.|
T Consensus 348 i--~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 348 I--SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred C--CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 112234445567778888888888999999999999 8999999999999999999999999988776
No 242
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.99 E-value=5.6e-05 Score=60.28 Aligned_cols=68 Identities=15% Similarity=0.013 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 48 LNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 48 ~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
...++...+...+.++++.|++ +.|+|+.+.|.+.++..+...+++++.|+++||+ ||+|.++....+
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 3444455555667899999987 5999999999999999999999999999999997 888877665443
No 243
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.96 E-value=2.4e-05 Score=83.11 Aligned_cols=173 Identities=10% Similarity=-0.028 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 007612 46 ILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLL 125 (596)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~ 125 (596)
.++..+....+.-.+.+++--++ ++++..+.-.|........+-++.-++.+++-.|+ |+-+++.+++....+=.+..
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~ 453 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYY 453 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHH
Confidence 44444444444445555554444 45565555556555556667777788899999996 99999999988877777766
Q ss_pred HhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHH-H
Q 007612 126 SLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYL-A 204 (596)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~ 204 (596)
.+. .|+|+.+..-+++|+..+..+.++.++++...|++. |.++-++... .
T Consensus 454 S~L-----------------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f 504 (618)
T KOG3762|consen 454 SYL-----------------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIF 504 (618)
T ss_pred HHh-----------------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHh
Confidence 666 348888899999999999999999999999999999 8888888544 5
Q ss_pred HhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHHHHhcCcc
Q 007612 205 LNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVLFLAGTTR 249 (596)
Q Consensus 205 ~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 249 (596)
-.+|-.+|.+|+|.+...++-+-.|.+.++.+++.++....+.+.
T Consensus 505 ~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 505 HGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred cccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 589999999999999999998888988887777666665554443
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.95 E-value=0.009 Score=64.64 Aligned_cols=161 Identities=15% Similarity=0.084 Sum_probs=99.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----hHHHHHHHHHHHHHHHHH-hhhHHHHhhhccCchHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQN-----NAEAANNVSKWTGTVYIF-SLVGAFLSDSYWGRFKTCAIF 114 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~-----~~~~~~~~~~~~~~~~i~-~~~~G~laDr~~Gr~~~l~~~ 114 (596)
+.++......++....|+.+. -++|.+..+ .....++.+...+...+. .++-+++++|+ +|++.+-+.
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR-----~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~~ 80 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILR-----DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYTV 80 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHHH
Confidence 445555555555555554443 256777663 245566666655544444 78889999997 999998887
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCC------ch---------hHHHHHHHHHHHHHhcccccc-chhhh
Q 007612 115 QGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHS------SL---------EICLFYLSIYFVALGNGGYQP-NIATF 178 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---------~~~~l~~~~~l~g~g~g~~~~-~~~~~ 178 (596)
...+.+...++++... |. .+..||+.... +. +.|..-+.-+...+-.....+ .-+++
T Consensus 81 ~~~F~~~f~lF~~vl~-p~------~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~f 153 (472)
T TIGR00769 81 ISPFLGFFALFAFVIY-PL------SDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGF 153 (472)
T ss_pred HHHHHHHHHHHHHHHh-cc------hhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777776666665522 22 12233321110 00 011111111222233333333 67899
Q ss_pred hhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhc
Q 007612 179 GADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFE 220 (596)
Q Consensus 179 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~ 220 (596)
+.|.+..++ -.+.+++++.+.|+|..+++.+..++.
T Consensus 154 andi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 154 ANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888 678999999999999999999888876
No 245
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.92 E-value=4e-05 Score=83.44 Aligned_cols=132 Identities=10% Similarity=0.034 Sum_probs=87.0
Q ss_pred hhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHH
Q 007612 397 LSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVP 476 (596)
Q Consensus 397 ~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (596)
....+..++.+++.||+. + +++.+.+|.++.+++.+.++... .+...+..
T Consensus 56 ~~~~l~~ligG~LaDRil---G--------rrr~iliG~il~~lg~lll~~~~-------------------~~~~~~~l 105 (493)
T PRK15462 56 SLVYVTPILGGFLADKVL---G--------NRMAVMLGALLMAIGHVVLGASE-------------------IHPSFLYL 105 (493)
T ss_pred HHHHHHHHHHHHHHHHcc---C--------cHHHHHHHHHHHHHHHHHHHHhh-------------------cchhHHHH
Confidence 344445555565544432 3 33457888888888876554311 11122333
Q ss_pred HHHHHHHHHHhhhhhHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhH
Q 007612 477 QYALIGASEVFMYVAQLEFFNAQAPDG--LKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDR 554 (596)
Q Consensus 477 ~~~l~g~~~~~~~~~~~~~~~~~~P~~--~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 554 (596)
...+..++.+...+...+++.|.+|++ .|.++.+++.+..++|+.++|.+.+.+.+ ..+++.
T Consensus 106 ~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~----------------~~Gw~~ 169 (493)
T PRK15462 106 SLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE----------------EYSWAM 169 (493)
T ss_pred HHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh----------------hhChHH
Confidence 445555666776777788999999975 79999999999999999999999997754 224567
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 007612 555 FYFLLAGLTTVDFVVYIACA 574 (596)
Q Consensus 555 ~f~~~a~i~~i~~~~~~~~~ 574 (596)
.|+..++.++++.+.+++..
T Consensus 170 ~F~iaaigm~l~li~~~~~~ 189 (493)
T PRK15462 170 GFGLAAVGMIAGLVIFLCGN 189 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 88776665666555554433
No 246
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.88 E-value=0.00028 Score=78.04 Aligned_cols=193 Identities=15% Similarity=0.015 Sum_probs=107.0
Q ss_pred CCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFF-GVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQG 116 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~ 116 (596)
..+|.....+....++.++-+ .+..+.+.. -+..|.+... .+...+..+...++..++.++.||+ |||+.++.+..
T Consensus 291 ~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~i-f~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~ 367 (513)
T KOG0254|consen 291 KVRKRLIIGLLLQLFQQLTGINYVFYYSTTI-FKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAA 367 (513)
T ss_pred chHHHHHHHHHHHHHHHHhCCceEEeehHHH-HHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHH
Confidence 344555556666666655543 333444444 4566666443 4555556667777888889999997 99999999999
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 117 IFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
.+.++.++++....... .|.. .........+....+.......+..|..+.+.+|.+|.+. |++
T Consensus 368 ~m~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------r~~ 431 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFAL---------YYPN-SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------RSK 431 (513)
T ss_pred HHHHHHHHHHHHHHHhc---------cCCC-cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------Hhh
Confidence 99999888876632111 0000 0011112222222222333334455777789999999999 888
Q ss_pred HHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHH-HHHhcCcc
Q 007612 197 FFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALV-LFLAGTTR 249 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~-~~~~~~~~ 249 (596)
+.++......+...+-......+.+..++...|.+......+... .+++..++
T Consensus 432 ~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pE 485 (513)
T KOG0254|consen 432 GASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPE 485 (513)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEccc
Confidence 888744443333332222222232332234455554444444433 33444444
No 247
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.77 E-value=3.5e-05 Score=80.53 Aligned_cols=180 Identities=12% Similarity=0.020 Sum_probs=120.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHH----HHHHH----HHHHHH-HhhhHHHHhhhccCchHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAAN----NVSKW----TGTVYI-FSLVGAFLSDSYWGRFKTC 111 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~----~~~~~----~~~~~i-~~~~~G~laDr~~Gr~~~l 111 (596)
+.++..+..-|+.-+.+|+...+...-+ +..|+.+.+... -++.. .....+ +-.++.++.|++ |||++.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~-~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIF-SAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHH-HhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 5666666667777777777655444333 455554443222 12222 122222 445567889996 999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHH-HHHHHHhccccccchhhhhhccCCcccccc
Q 007612 112 AIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLS-IYFVALGNGGYQPNIATFGADQYDEEDAKE 190 (596)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 190 (596)
+.+..++.+..+.++.. ++ | ..+...+++. -+.+-+++-+...+...+-+|.||++.
T Consensus 382 ~~GF~~~~i~~~~~~~~---y~----------~------~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv--- 439 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGP---YN----------Q------LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV--- 439 (538)
T ss_pred HhhHHHHHHHHHHHcCC---cc----------c------ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH---
Confidence 99988888877776655 11 0 0111222222 223446666767777788899999999
Q ss_pred ccchhhHHHHHHHHHhHHHHHHhhhhhhhcc-----cccchHHHHHHHHHHHHHHHHHHhcC
Q 007612 191 GHSKVAFFSYFYLALNLGSLFSNTILGYFED-----EGMWALGFWVSTGSAFAALVLFLAGT 247 (596)
Q Consensus 191 ~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~-----~~~~~~~f~~~~~~~~~~~~~~~~~~ 247 (596)
|+++-++...+.-.|+++|.....++.+ ..+.+.+|++.....+++.+..++++
T Consensus 440 ---R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 440 ---RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred ---hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence 9999999999999999999999899988 77889999998887777766555443
No 248
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.67 E-value=0.08 Score=56.73 Aligned_cols=189 Identities=12% Similarity=-0.034 Sum_probs=98.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHH-
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFV- 119 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~- 119 (596)
|..+.+...+++.+++--++-.-.+.|+.+-+.-+---.+.....-.+...++.+..|...||. -|.+++..+.+.--
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~ 80 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNL 80 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHH
Confidence 4557788888888888888888888888765443333333333344566777888889999996 89888766654322
Q ss_pred ---HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHH-HHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 120 ---IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSI-YFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 120 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
++..++......+. .+..++.....+++.. .+..+..=+......+.=-|+...=..++...+.
T Consensus 81 sv~~s~~~~~~l~~~~~------------~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La 148 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPS------------SSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALA 148 (432)
T ss_pred HHHHHHHHHHHHHhCCc------------cccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHH
Confidence 22222221111111 0000011122222222 2222221121222223334443321111111144
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHH
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVL 242 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~ 242 (596)
+..+...=.=-+--++||++.|.+....+......+.++..++....
T Consensus 149 ~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 149 RMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 44444333335567889999999988778777666666555555543
No 249
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.65 E-value=0.0011 Score=70.98 Aligned_cols=102 Identities=13% Similarity=0.063 Sum_probs=81.2
Q ss_pred hhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHH
Q 007612 396 ILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQV 475 (596)
Q Consensus 396 ~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (596)
..+-.+.....+.+.+ |.+ .++.+.++++...+..++.++.. +...+.
T Consensus 72 ~ysYal~qIp~GlLaD----rlG--------~K~vL~l~~l~Wsl~t~L~~fa~--------------------Sl~~L~ 119 (511)
T TIGR00806 72 PYSHLAVLVPVFLLTD----YLR--------YKPVLVLQALSFVCVWLLLLLGT--------------------SVWHMQ 119 (511)
T ss_pred HHHHHHHHHHHHHHHH----HhC--------chHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHH
Confidence 3444455555554433 443 44568888888888887777642 567788
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 476 PQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMV 530 (596)
Q Consensus 476 ~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i 530 (596)
+.-+++|++++... +.+.++++-+|++.|++++|+.+....+|.++++.+.+.+
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999 9999999999999999999999999999999999999973
No 250
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.61 E-value=0.042 Score=56.62 Aligned_cols=161 Identities=17% Similarity=0.188 Sum_probs=95.8
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhh-----hccCchHH
Q 007612 36 KSGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSD-----SYWGRFKT 110 (596)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laD-----r~~Gr~~~ 110 (596)
.+...+.+.++++.+..+.+.+-.+. .+|..++ .-|.|-++.+.....+ --+.--++...+.| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~-ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQ-AKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCchhHhh-hhHHHhc-CCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 45566788999999999988865554 5665554 5667666554333222 11233466777888 86 99887
Q ss_pred HHH-HHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccc
Q 007612 111 CAI-FQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAK 189 (596)
Q Consensus 111 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 189 (596)
-++ +..+ +|.++..++.. .|+..+ +....++...+....++.-+..+.--.++-...-.+..+++
T Consensus 101 Wvvp~q~l--lG~~mllLs~~----v~~~~g------~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~-- 166 (510)
T KOG3574|consen 101 WVVPCQYL--LGLFMLLLSYL----VDRGLG------GNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN-- 166 (510)
T ss_pred eeeehHHH--HHHHHHHHhhC----CCcccc------cCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh--
Confidence 544 3333 33344433311 111221 12222334434334445556666666677777777888887
Q ss_pred cccchhhHHHHHHHHHhHHHHHHhhhhhhh
Q 007612 190 EGHSKVAFFSYFYLALNLGSLFSNTILGYF 219 (596)
Q Consensus 190 ~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l 219 (596)
.+-+......+.+.|.++|..+.-.+
T Consensus 167 ----lgyaST~q~Vg~~~GyfL~~~ifLaL 192 (510)
T KOG3574|consen 167 ----LGYASTCQSVGQTAGYFLGNVVFLAL 192 (510)
T ss_pred ----cCchhHHHHHHHhhhHHhhcceeeEe
Confidence 77777777888888888887654433
No 251
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.58 E-value=0.0029 Score=70.12 Aligned_cols=153 Identities=10% Similarity=-0.054 Sum_probs=107.1
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChH---HHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHH-H
Q 007612 37 SGGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNA---EAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTC-A 112 (596)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~---~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l-~ 112 (596)
.+.+|.+...+++.+.....+|.+..+-|......++-|+. +.++......++..++.++.|.+.-++ +|-|.. +
T Consensus 306 f~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li 384 (599)
T PF06609_consen 306 FKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLI 384 (599)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHH
Confidence 34457777777888888888888887777776666665553 567787888888889999999999886 776665 4
Q ss_pred HHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCcccccccc
Q 007612 113 IFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGH 192 (596)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 192 (596)
++.+++.++.-.++.. . ++ |....+...++.|+|.|...........-..|++.
T Consensus 385 ~~~~~~ta~~Gama~~-~-~~-------------------n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~----- 438 (599)
T PF06609_consen 385 FGSVLMTAFCGAMAAV-R-PD-------------------NKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED----- 438 (599)
T ss_pred HHHHHHHHHHHHHHHc-c-CC-------------------CcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH-----
Confidence 5555555444444433 1 11 22334556678888888877676666666677777
Q ss_pred chhhHHHHHHHHHhHHHHHHhhhhh
Q 007612 193 SKVAFFSYFYLALNLGSLFSNTILG 217 (596)
Q Consensus 193 ~r~~~~~~~~~~~~lg~~~~~~i~g 217 (596)
.+.+.++....-.+|+.+|..+-.
T Consensus 439 -ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 439 -IGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred -HHHHHHHHHHHHHHhhHHHHHHHH
Confidence 888888888888888888776543
No 252
>PTZ00207 hypothetical protein; Provisional
Probab=97.47 E-value=0.0023 Score=71.11 Aligned_cols=119 Identities=10% Similarity=0.062 Sum_probs=86.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHH
Q 007612 427 ELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKS 506 (596)
Q Consensus 427 ~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg 506 (596)
++..+.+|.++..++.++.++.... .-..+.+.+.+..++.|+|.+..++.....+.+.+| +.||
T Consensus 90 ~R~vllig~ll~~iG~ll~ala~~~--------------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG 154 (591)
T PTZ00207 90 PRPIFVLSMTVFCLGTLLFALTFQE--------------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRG 154 (591)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcc--------------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhH
Confidence 5567899999999999888764210 001256667778889999999998888888899997 6799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccc
Q 007612 507 FGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWY 577 (596)
Q Consensus 507 ~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~ 577 (596)
.+.|+......+|+++.+.+...+.. .++..+|++++++.++..++.+.+.+..
T Consensus 155 ~a~Gi~~~~~gLGsaI~~~l~~~l~~-----------------~~~~~~fl~l~vl~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 155 AVVAIMKTFTGLGSAILGSIQLAFFS-----------------DNTSAYFFFLMSFALVVGILAIVFMRLP 208 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HhHHHHHHHHHHHHHHHHHHHHhheeCC
Confidence 99999999999999865555443322 1234577778888877776666655443
No 253
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.34 E-value=0.0007 Score=70.97 Aligned_cols=185 Identities=15% Similarity=0.058 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
+.+.++++...+....++++.+.+..-+ ..-|.+...+|.+.....++..+++.++|.++||...-|++.++......+
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v 344 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALV 344 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Confidence 4566667666666666666665554333 245777788899999999999999999999999973334455555444444
Q ss_pred HHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHH
Q 007612 121 GLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSY 200 (596)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 200 (596)
+...+...+. .. ...+.++....+.|++..+..|...-+..|..-|..+ ++..|+
T Consensus 345 ~~~~l~~~t~-~~------------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E------~tSsGl 399 (480)
T KOG2563|consen 345 GTLMLLTCTL-FL------------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE------GTSSGL 399 (480)
T ss_pred HHHHHHHhhc-cC------------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC------ccccee
Confidence 4322222111 11 1244555666677877778888888888887544442 244556
Q ss_pred HHHHHhHHHHHHhhhhhhhccccc----chHHHHHHHHHHHHHHHHHHhcCccee
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGM----WALGFWVSTGSAFAALVLFLAGTTRYR 251 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~----~~~~f~~~~~~~~~~~~~~~~~~~~~~ 251 (596)
.+...++.+++-.++-+...+..+ +...-+.....+.+..++..+.++.++
T Consensus 400 l~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 400 LNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred EEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 666666767666667777766555 333333444444555555555555443
No 254
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.23 E-value=0.0046 Score=66.47 Aligned_cols=157 Identities=13% Similarity=0.042 Sum_probs=104.0
Q ss_pred chhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHH
Q 007612 395 DILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQ 474 (596)
Q Consensus 395 ~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (596)
..++..++.+..+..-.|.. +.++-++.|.++++++.+++..++.. ++...+++
T Consensus 80 ~slg~~i~~liF~~Ws~k~~-----------~~k~Pli~s~ii~~~g~llY~~l~~~---------------~~~~~y~m 133 (488)
T KOG2325|consen 80 SSLGHAIFSLIFGIWSNKTG-----------SVKKPLIVSFLIAIIGNLLYLALAYV---------------PNGVKYLM 133 (488)
T ss_pred HHHHHHhcchhhcccccccC-----------CcccCHHHHHHHHHHHHHHHHHHHhc---------------ccchHHHH
Confidence 45556666666664422211 12334899999999998887554422 11256778
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhH
Q 007612 475 VPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDR 554 (596)
Q Consensus 475 ~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 554 (596)
.+..++.|+|.+..... =.|+++..-.++|.++++..+....+|..+||.+...+....... ..+.+. ..-..|..
T Consensus 134 L~~R~l~Gvg~~n~a~l-R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G--~~i~~~-~~~n~YTa 209 (488)
T KOG2325|consen 134 LVARILTGVGVGNFAVL-RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKG--FMILPG-LIFNMYTA 209 (488)
T ss_pred HHHHHHcCcCcccHHHH-HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCc--eEEcCc-ceEEecch
Confidence 88999999986654443 368888777788888888888877888888888777655432211 123332 33345666
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccc
Q 007612 555 FYFLLAGLTTVDFVVYIACAKWYKCIE 581 (596)
Q Consensus 555 ~f~~~a~i~~i~~~~~~~~~~~~~~~~ 581 (596)
.=|+.+++.++..++..++.+|..+..
T Consensus 210 p~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 210 PAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred HHHHHHHHHHHHHHHHHhheeecccCc
Confidence 778899999999988888888765543
No 255
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.19 E-value=0.0018 Score=71.70 Aligned_cols=131 Identities=8% Similarity=0.076 Sum_probs=97.9
Q ss_pred chhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHH
Q 007612 395 DILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQ 474 (596)
Q Consensus 395 ~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (596)
..++.++...+.+ ++.+|.+ ++..+.+++++..++-+..++. .+.+..
T Consensus 127 ~~~G~~vG~~i~g----~lsD~~G--------Rk~~~~~~~~~~~i~~~~~a~a--------------------~~~~~~ 174 (521)
T KOG0255|consen 127 FFLGVLVGSLIFG----PLSDRFG--------RKPVLLVSLLLFIIFGILTAFA--------------------PNYWMF 174 (521)
T ss_pred HHHHHHHHHhhhe----ehHhhcc--------cHHHHHHHHHHHHHHHHHHHHh--------------------CcHHHH
Confidence 3444444444444 4455554 3445788888888777666664 477888
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhH
Q 007612 475 VPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDR 554 (596)
Q Consensus 475 ~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 554 (596)
++.-++.|++.+......+.+..|..+++.|+.+..+ ....+.++.+++...+++.. +| ++
T Consensus 175 ~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~W----------r~ 235 (521)
T KOG0255|consen 175 LIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DW----------RW 235 (521)
T ss_pred HHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hH----------HH
Confidence 8889999999999999999999999999999999999 88888899898888887654 34 67
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc
Q 007612 555 FYFLLAGLTTVDFVVYIACAKWY 577 (596)
Q Consensus 555 ~f~~~a~i~~i~~~~~~~~~~~~ 577 (596)
.+|+..+...+.+++ +++.+|.
T Consensus 236 ~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 236 LFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred HHHHHHHHHHHHHHH-HHccCcC
Confidence 788877777776665 4444343
No 256
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.15 E-value=0.014 Score=53.33 Aligned_cols=111 Identities=13% Similarity=0.078 Sum_probs=82.5
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhH
Q 007612 75 NNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEI 154 (596)
Q Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (596)
++..-..-.++......+.+++++.+.+++ |.|+.++++.+...+-...... | +.
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~----~--------------------~~ 89 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY----P--------------------NS 89 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh----h--------------------hH
Confidence 333334445555666778888888999996 9999999998776654443322 2 36
Q ss_pred HHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhh
Q 007612 155 CLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTIL 216 (596)
Q Consensus 155 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~ 216 (596)
+.++.+-++.|++.+..+.+...++.+..+++. |++-.+++....+.+.++|.++.
T Consensus 90 ~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 90 YTLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999999999999999887777 77777777666666666665443
No 257
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.07 E-value=0.0037 Score=64.26 Aligned_cols=129 Identities=14% Similarity=0.115 Sum_probs=99.5
Q ss_pred HHHHH-HHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCc-hHHHHHHHHHHHHHHHHHHhhhccccccCCCCCC
Q 007612 64 LVLFL-TRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGR-FKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGN 141 (596)
Q Consensus 64 l~~yl-~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (596)
-..++ ...+|+++.+.|-+.+...+...+.+..-.+..||..|- +-.+..++..+.-..++...+.
T Consensus 283 t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~------------ 350 (451)
T KOG2615|consen 283 TVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLAR------------ 350 (451)
T ss_pred hHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccc------------
Confidence 33344 457899999999999999998888888888889986333 3334444444444444444441
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcc
Q 007612 142 ELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFED 221 (596)
Q Consensus 142 ~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~ 221 (596)
....++.+..+-.+..+...+....++....|+.+ ||+..|+....+.++-++||.++|.+..
T Consensus 351 -----------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 351 -----------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred -----------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 24567888888888888888999999999999999 9999999999999999999999987754
No 258
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.98 E-value=0.0026 Score=68.81 Aligned_cols=152 Identities=21% Similarity=0.178 Sum_probs=116.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHH-HHhhhccCchHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGV-NLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGA-FLSDSYWGRFKTCAIFQ 115 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G-~laDr~~Gr~~~l~~~~ 115 (596)
++.|..+.++...+.....-.+-.. .+..|+...++++..+.+...+.......+++++.. .+.-. +|-|+++.+|+
T Consensus 237 ~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl 315 (463)
T KOG2816|consen 237 GPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGL 315 (463)
T ss_pred CCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHH
Confidence 3445555555555554443322111 335677788999999999999999999999988887 66666 49999999999
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 116 GIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
....+.....+++. +.++.+....+.++. +...|+..++++.+.++++ ++
T Consensus 316 ~~~~~~~~~~af~~-----------------------~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e------~g 365 (463)
T KOG2816|consen 316 LSEFLQLLLFAFAT-----------------------ETWMMFAAGVVVALA-GIVFPAIRAFASILVSPEE------QG 365 (463)
T ss_pred HHHHHHHHHHHHhc-----------------------cchhhhHHHHHHHhh-cchhHHHHhHHHhhccccc------cc
Confidence 99999999999982 266666666555444 6677999999999999999 99
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhhc
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYFE 220 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l~ 220 (596)
+.+++....-.+.++++|.+-+.+.
T Consensus 366 ~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 366 KVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred chhhHHHHHHHHhhhhhHHHHHHHH
Confidence 9999999999999999998877653
No 259
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.85 E-value=0.011 Score=47.78 Aligned_cols=72 Identities=11% Similarity=-0.064 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhh
Q 007612 55 LAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLS 128 (596)
Q Consensus 55 ~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~ 128 (596)
++-+..++.+| .+.++.++|..+++++.+...+++.++.+...++.++. .+++.+..++++..+..+.+++.
T Consensus 6 igRFayTplLP-~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 6 IGRFAYTPLLP-LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hHHHHHHhHhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566555 57789999999999999999999999999999999985 88899999999999999888887
No 260
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.77 E-value=0.33 Score=52.12 Aligned_cols=62 Identities=16% Similarity=0.145 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007612 472 FWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKI 533 (596)
Q Consensus 472 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~ 533 (596)
..++..+++..+..-..+.+..++-.+++.+..-|+.|-+.|+..++|+-.-..++-.+.+.
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 34455678888888888899999999999999999999999999999887766665544444
No 261
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.69 E-value=0.00042 Score=76.63 Aligned_cols=176 Identities=12% Similarity=0.109 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH-HHHHHhhhHHHHhhhc-cCchHHHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTG-TVYIFSLVGAFLSDSY-WGRFKTCAIFQGIF 118 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~-~Gr~~~l~~~~~~~ 118 (596)
+.+....+....+....-++.+++|-|++.++++++.+++.+.+...+ +..++.+++|++..|+ .+.|+.+....+..
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~ 384 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS 384 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence 456677778888888888999999999999999999999988877755 6779999999999996 23455544444433
Q ss_pred HHHHHH---H-Hhhhccc---cccC---------------CCCCCCC---------CCCCCCCchhHHHHHHHHHHHHHh
Q 007612 119 VIGLVL---L-SLSSYLF---LIRP---------------RGCGNEL---------TPCGTHSSLEICLFYLSIYFVALG 167 (596)
Q Consensus 119 ~~~~~~---~-~~~~~~~---~~~~---------------~~~~~~~---------~~~~~~~~~~~~~l~~~~~l~g~g 167 (596)
.++.+. + .+....+ .+.. ..||++. -.|...=..+...+++..++..+.
T Consensus 385 ~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~ 464 (539)
T PF03137_consen 385 IVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFF 464 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHH
Confidence 333322 1 1110000 0000 2233211 112222112344555555555555
Q ss_pred ccccccchhhhhhccCCccccccccchhhHHHHHHH-HHhHHHHHHhhhhhhhccc
Q 007612 168 NGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYL-ALNLGSLFSNTILGYFEDE 222 (596)
Q Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~lg~~~~~~i~g~l~~~ 222 (596)
.+..........-+.+|+++ |..+.|+... .--+|.+-||++.|++.|.
T Consensus 465 ~~~~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 465 TFMSQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp --------------------------------------------------------
T ss_pred HHhcccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 55556666667778999999 9999999555 4477889999999998875
No 262
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.67 E-value=0.011 Score=66.43 Aligned_cols=178 Identities=11% Similarity=0.089 Sum_probs=109.5
Q ss_pred CccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHH--hhhhhhhccc------
Q 007612 388 PASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVE--CYRLKYAKTE------ 459 (596)
Q Consensus 388 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~--~~~~~~~~~~------ 459 (596)
++.+...+-++..+...++.+. ..|.. +.+.+.+|.++++++.++.++-. .+.|......
T Consensus 134 sG~I~s~~dig~~l~i~fVsYf----G~r~H--------rPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~ 201 (735)
T KOG3626|consen 134 SGLIASSYDIGNLLLIIFVSYF----GSRGH--------RPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVE 201 (735)
T ss_pred ceeEeeecccchhhhhHhHHHh----ccccC--------ccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcccc
Confidence 4555555566666666666543 33332 44568899999999988776532 1122211100
Q ss_pred -C--------------------CCCC--CCcee-ehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHH
Q 007612 460 -C--------------------KHCE--GASSL-SIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTS 515 (596)
Q Consensus 460 -~--------------------~~~~--~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~ 515 (596)
+ .++. ...+. .+..++.+.++.|+|....++...+|+.|-+.++.-+...|+.+++
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~ 281 (735)
T KOG3626|consen 202 NPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSM 281 (735)
T ss_pred CCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHH
Confidence 0 0111 12222 2335666889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHH----HHHHHHHHHHHHHHHHhhccccc
Q 007612 516 ISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRF----YFLLAGLTTVDFVVYIACAKWYK 578 (596)
Q Consensus 516 ~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----f~~~a~i~~i~~~~~~~~~~~~~ 578 (596)
..+|.++|-++.+...+...+-+.. -..-+..+..+-.+ |++.+++.++..+.++++-++..
T Consensus 282 ~~lGPaiGfllgS~~l~lYvD~~~~-~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 282 AILGPAIGFLLGSFCLKLYVDFGLS-PIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHhhhHHHHHHHHHHHHeeeccccC-CCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 9999999988888776654332100 00001122333334 44556666666666666655544
No 263
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.62 E-value=1.2 Score=47.83 Aligned_cols=164 Identities=15% Similarity=0.081 Sum_probs=97.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC---hHHHHHHHHHHHH-HHHHHhhhHHHHhhhccCchHHHHHH
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQN---NAEAANNVSKWTG-TVYIFSLVGAFLSDSYWGRFKTCAIF 114 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~---~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Gr~~~l~~~ 114 (596)
.++.+..+.+..++..+.+.... -++|.+..+ +....++-+..-+ +..+..++-+++.++. -|.+++-+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~ 98 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHH
Confidence 34555556665555555443332 245665443 4445666666655 6778888999999996 999999888
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCCCCCCCC---C------CC-C------chhHHHHHHHHHHHHHhcccccc-chhh
Q 007612 115 QGIFVIGLVLLSLSSYLFLIRPRGCGNELTPC---G------TH-S------SLEICLFYLSIYFVALGNGGYQP-NIAT 177 (596)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~-~------~~~~~~l~~~~~l~g~g~g~~~~-~~~~ 177 (596)
...++...+++++... |. ..-.|+. . .+ + --+.|..-+.-...=+-.....+ .-+.
T Consensus 99 ~~~F~~fF~LFa~Vi~-P~------~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~ 171 (509)
T COG3202 99 LGFFLGFFALFAFVIY-PY------KDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQ 171 (509)
T ss_pred HHHHHHHHHHHHHHHh-cc------ccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888777632 22 1112221 0 00 0 00111111111111111111111 3456
Q ss_pred hhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcc
Q 007612 178 FGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFED 221 (596)
Q Consensus 178 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~ 221 (596)
+..|+...++ -.+.+++++.+.|++..++..+..++..
T Consensus 172 faNeitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 172 FANEITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6778877777 6789999999999999999988888865
No 264
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.50 E-value=0.0034 Score=66.97 Aligned_cols=138 Identities=13% Similarity=0.103 Sum_probs=103.2
Q ss_pred HHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHH
Q 007612 399 VAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQY 478 (596)
Q Consensus 399 ~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (596)
+-+...+.+++.||+.+ .++.+..|.++.+++.+.++... ......+.+.+
T Consensus 74 VY~t~i~GG~laDr~LG-----------~~~tI~lGail~~iGh~~L~~~~------------------~~~~~gl~i~L 124 (498)
T COG3104 74 VYLTPIIGGWLADRVLG-----------TRRTIVLGAILMAIGHLVLAISS------------------VSGPGGLYIGL 124 (498)
T ss_pred HHHHHHHHHHHHHHhcc-----------hhHHHHHHHHHHHHHHHHHhccc------------------cccccHHHHHH
Confidence 33444455555444443 34469999999999999887631 12455677788
Q ss_pred HHHHHHHHhhhhhHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHH
Q 007612 479 ALIGASEVFMYVAQLEFFNAQAPDG--LKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFY 556 (596)
Q Consensus 479 ~l~g~~~~~~~~~~~~~~~~~~P~~--~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f 556 (596)
+++++|.+..=+...++..|+.|++ .|-.+.+++.+..++|+.++|.+.+++.+ ..+++..|
T Consensus 125 ~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~----------------~~g~~~gF 188 (498)
T COG3104 125 ALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI----------------NYGWHVGF 188 (498)
T ss_pred HHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH----------------hhCHHHHH
Confidence 8888999999999999999999954 35557777888889999999999998765 34567889
Q ss_pred HHHHHHHHHHHHHHHhhcccccccc
Q 007612 557 FLLAGLTTVDFVVYIACAKWYKCIE 581 (596)
Q Consensus 557 ~~~a~i~~i~~~~~~~~~~~~~~~~ 581 (596)
...++-+.++++.+++..+..+...
T Consensus 189 ~~aavGm~~gl~~f~~~~r~~~~~~ 213 (498)
T COG3104 189 GLAAVGMIIGLVIFLLGRRHVKGIG 213 (498)
T ss_pred HHHHHHHHHHHHHHHHccchhcCCC
Confidence 8888888888888888877766543
No 265
>PRK03612 spermidine synthase; Provisional
Probab=96.41 E-value=0.14 Score=56.59 Aligned_cols=174 Identities=13% Similarity=0.043 Sum_probs=93.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH-
Q 007612 39 GWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI- 117 (596)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~- 117 (596)
+.+.+....+...+..+.+-.+.. -.+...+|-+....+.+++.+.++..+|+.++|+++++- -| +...+-..+
T Consensus 15 ~~~~l~~~~f~sg~~~L~yEv~~~---r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~-~~~~~e~~i~ 89 (521)
T PRK03612 15 DRALLLAAVFVCAACGLVYELLLG---TLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AA-GFVAVELLLA 89 (521)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HH-HHHHHHHHHH
Confidence 334455555555555555544433 334456788888889999999999999999999887542 22 222221111
Q ss_pred -HH-HHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchh
Q 007612 118 -FV-IGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKV 195 (596)
Q Consensus 118 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 195 (596)
.. ++..++..... .. ......++...++.++..|+..|....+..+... ++ -+
T Consensus 90 l~~~~~~~ll~~~~~-~~-----------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g 144 (521)
T PRK03612 90 LLGGLSALILYAAFA-FQ-----------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LG 144 (521)
T ss_pred HHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hh
Confidence 11 11111111100 00 0011223344455667777777766666544322 12 23
Q ss_pred hHHHHHHHHHhHHHHHHhhhhhhhc-ccccchHH-HHHHHHHHHHHHHH
Q 007612 196 AFFSYFYLALNLGSLFSNTILGYFE-DEGMWALG-FWVSTGSAFAALVL 242 (596)
Q Consensus 196 ~~~~~~~~~~~lg~~~~~~i~g~l~-~~~~~~~~-f~~~~~~~~~~~~~ 242 (596)
+..|-.|....+|+++|.++.+++. ...|-... +.++.+-.+++++.
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 4566777788889999988888654 34554433 33333333344333
No 266
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.21 E-value=0.062 Score=53.17 Aligned_cols=91 Identities=15% Similarity=0.097 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHH
Q 007612 427 ELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKS 506 (596)
Q Consensus 427 ~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg 506 (596)
+...+.+|.+...+++..+.....++ .+..+.|.+.....+.+.+....+.+...-..+.+|+ .||
T Consensus 65 p~~~l~iG~~~~~~GY~~~~l~~~~~-------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG 130 (250)
T PF06813_consen 65 PWVVLLIGAVLGFVGYGLLWLAVSGR-------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRG 130 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCc-------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccC
Confidence 66678899999999988776543221 1123556666666677777777777777777789985 699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 507 FGSALCMTSISLGNYVSSLLLTMVM 531 (596)
Q Consensus 507 ~~~gl~~~~~~lg~~lg~~l~~~i~ 531 (596)
++.|+.-....+++++-..+...+.
T Consensus 131 ~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 131 TVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred ceehhhhHHHHhHHHHHHHHHHHHc
Confidence 9999999999998877766665443
No 267
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.11 E-value=0.048 Score=57.55 Aligned_cols=125 Identities=12% Similarity=0.044 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCch---hH
Q 007612 429 QRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDG---LK 505 (596)
Q Consensus 429 ~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~---~r 505 (596)
+.+.+|.++..++++++.+..... ...+......+.+++.++++|.+..=|...++..|+++++ .|
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~-----------~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~ 70 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPP-----------SLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRR 70 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSS-----------SC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcc-----------hhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhh
Confidence 457788888888888755433110 0011223456777888999999999999999999999976 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhccccccc
Q 007612 506 SFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKCI 580 (596)
Q Consensus 506 g~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~~ 580 (596)
..+-..+.+..++|..++..+.+++.+ +.++...|++.++.++++.+.++.-.+.++..
T Consensus 71 ~~~F~~fY~~in~G~~~~~~~~~~i~~----------------~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 71 DSFFNWFYWGINIGSLFSPTLVPYIQQ----------------NYGWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHH----------------CS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhHHHHHHHHhhhhHhhcccchhhcc----------------ccchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 556666777888899888877776654 34567788888888888888777776666554
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.99 E-value=2.6 Score=44.45 Aligned_cols=57 Identities=21% Similarity=0.185 Sum_probs=47.8
Q ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 007612 470 SIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLL 526 (596)
Q Consensus 470 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l 526 (596)
+-+|.+....++|+..+-.....+.+..+..|++++-.+..+..+.-..|-..|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 457778888999999999999999999999999999988888888777777766544
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.95 E-value=3.1 Score=44.92 Aligned_cols=59 Identities=14% Similarity=0.091 Sum_probs=50.4
Q ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 470 SIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLT 528 (596)
Q Consensus 470 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~ 528 (596)
+-++.++.++++|+..|........+..+..++++|..+..+..++-.+|-.+|..+.-
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566667899999999999999999999999999999999999998888888876644
No 270
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.92 E-value=0.18 Score=54.06 Aligned_cols=153 Identities=12% Similarity=0.001 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGL 122 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~ 122 (596)
+++..++..+-.++--+.-..+..|+..+ |+++...|..-+...+....+.....++.+|+ |..|.=+++.......+
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCL 337 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHH
Confidence 33333333333333334455567788755 99999999999999999999999999999997 99888777776555444
Q ss_pred HHHHhhhccccccCCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHH
Q 007612 123 VLLSLSSYLFLIRPRGCGNELTPCGTH-SSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYF 201 (596)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 201 (596)
.+...+-..|. .. +..+...++.+.++.=+|.=++--+..-++.|..|+++ |+...+..
T Consensus 338 ~~~v~~~~~~~--------------~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq 397 (432)
T PF06963_consen 338 ALCVVSFWAPG--------------SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQ 397 (432)
T ss_pred HHHHHHHhcCC--------------CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHH
Confidence 44333211111 00 12345566666666556665777888899999999998 99999999
Q ss_pred HHHHhHHHHHHhhhhh
Q 007612 202 YLALNLGSLFSNTILG 217 (596)
Q Consensus 202 ~~~~~lg~~~~~~i~g 217 (596)
+...++.-.+...++-
T Consensus 398 ~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 398 NSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9888888888765443
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.24 E-value=0.2 Score=54.08 Aligned_cols=118 Identities=18% Similarity=0.104 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCc--hh
Q 007612 427 ELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPD--GL 504 (596)
Q Consensus 427 ~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~--~~ 504 (596)
++..+.+|.++.+++...++..... ..+.......+++..+|.++.....-++..|...+ +.
T Consensus 58 r~~Y~~i~~~~~~~~~~~~~~~~~~----------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~ 121 (433)
T PF03092_consen 58 RKPYMIIGWLLGAVSALVLALLPAS----------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES 121 (433)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccc----------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch
Confidence 4456777877776666666554311 12344455566777888888887777777777632 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhccc
Q 007612 505 KSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKW 576 (596)
Q Consensus 505 rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~ 576 (596)
+|..++.......+|+.++..+.|.+.+.. +++..|++.+++..+..+..+++..|
T Consensus 122 ~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~----------------~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 122 RGDLQSFVWGVRSVGSLVGSLLSGPLLDSF----------------GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhcC----------------CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 788899999999999999998988766522 22335666677777766666666665
No 272
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.08 E-value=1 Score=49.12 Aligned_cols=163 Identities=18% Similarity=0.118 Sum_probs=89.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCChHHHHHHHHHHHH-HHHHHhhhHHHHhhhccCchHHHHHHH
Q 007612 40 WVAGIIILLNQGLATLAFFGVGVNLVLFLTRVL---QQNNAEAANNVSKWTG-TVYIFSLVGAFLSDSYWGRFKTCAIFQ 115 (596)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~~~~~~~~~~~~~~~-~~~i~~~~~G~laDr~~Gr~~~l~~~~ 115 (596)
++.++.+.+..++....|- +.--++|.+ ..++.....+-....+ +..+...+-.+++|++ +|.+++-+..
T Consensus 23 ~~k~~~l~~m~f~i~f~y~-----~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~ 96 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYT-----ILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIII 96 (491)
T ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHH
Confidence 3455555555555444322 112234433 1233334444443333 4566677789999997 9999888777
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCCCCCCCC------Cch---------hHHHHHHHHHHHHHhcccccc-chhhhh
Q 007612 116 GIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTH------SSL---------EICLFYLSIYFVALGNGGYQP-NIATFG 179 (596)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---------~~~~l~~~~~l~g~g~g~~~~-~~~~~~ 179 (596)
..+.....+.++... |+ .+=.||+... .+. +.|...+.-+..-+-.....+ .-+.+.
T Consensus 97 ~~F~~fF~~f~~vly-P~------~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fA 169 (491)
T PF03219_consen 97 IPFLGFFALFAFVLY-PN------RDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFA 169 (491)
T ss_pred HHHHHHHHHHHHHHh-hc------hhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766666666665422 32 1112331100 000 111111111111111112122 347888
Q ss_pred hccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcc
Q 007612 180 ADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFED 221 (596)
Q Consensus 180 ~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~ 221 (596)
.|.++.++ -.+.++++..+.|+|.+++..+..++.+
T Consensus 170 N~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 170 NEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888 6689999999999999999888887766
No 273
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.07 E-value=0.084 Score=55.72 Aligned_cols=61 Identities=16% Similarity=0.166 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhh
Q 007612 153 EICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYF 219 (596)
Q Consensus 153 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l 219 (596)
+.+.+++..+..|+..|....+....+.+..|+++ |.-+++...++-++|..++..++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 37777788888999989999999999999988888 88889888888888888887665544
No 274
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.51 E-value=0.52 Score=53.52 Aligned_cols=132 Identities=14% Similarity=0.072 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchh--
Q 007612 427 ELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGL-- 504 (596)
Q Consensus 427 ~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~-- 504 (596)
+.+.+.++.++..++++++++.... . . ...........++++.++|.+..-|...++..++++++.
T Consensus 53 ~~~tIl~~~ii~~lG~~llai~a~~-----~------~-~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~ 120 (654)
T TIGR00926 53 KFKTILYLSIVYVVGHALLSFGAIP-----S------S-GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLS 120 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCc-----c------c-ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchh
Confidence 4456778888888888776652100 0 0 000112234567788889999989999999999998643
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 007612 505 -KSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKC 579 (596)
Q Consensus 505 -rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~ 579 (596)
+-..-.++.+..++|+.+++.+.+.+.+.... + -...++...|.+.++.++++.++++...+.++.
T Consensus 121 ~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~-----f----g~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~ 187 (654)
T TIGR00926 121 LRSRFFSFFYFAINAGSLISTIITPILRGDVGC-----F----GCQDCYPLAFGVPAILMILALIVFMAGSKMYKK 187 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----c----ccCcchHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 55566667777788888888887766431100 0 012245678888888888888877766655543
No 275
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.35 E-value=0.15 Score=53.99 Aligned_cols=130 Identities=12% Similarity=0.065 Sum_probs=90.3
Q ss_pred CccccccchhhHHHHHHhhhhhhhcccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCCCCC-C
Q 007612 388 PASMSSFDILSVAAFIFLYRRVIEPLAGGIRKKNSKGLTELQRMGIGLVIAIVAMLAAGIVECYRLKYAKTECKHCEG-A 466 (596)
Q Consensus 388 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~i~ig~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~ 466 (596)
.+.+....++..++..|+.+...+|...|++.||| .+..+.....+++.++++........+... +. .
T Consensus 69 ~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP-------fI~~~s~~i~~~l~Lig~aaDig~~lgd~~----~~~~ 137 (498)
T KOG0637|consen 69 SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP-------FILAGSLLIAVSLFLIGYAADIGLLLGDNE----RKPV 137 (498)
T ss_pred ccccccccccccceecccccccccccccccccccc-------hHHHhhHHHHHHHhhhhhHhhhhHHhcCCc----cccc
Confidence 34455566788889999999999999888883333 477888888888877766543322122111 00 1
Q ss_pred ceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHH-HHHHHHHHHHHHHHHHHHHHH
Q 007612 467 SSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSF-GSALCMTSISLGNYVSSLLLT 528 (596)
Q Consensus 467 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~-~~gl~~~~~~lg~~lg~~l~~ 528 (596)
-...+...++.+-++-++......+.=++..+...++.+-+ +.+.+.++..+||.+|..+.+
T Consensus 138 ~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 138 KPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred chHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 11223344556666777777777777789999998888888 999999999999999977655
No 276
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.00 E-value=0.88 Score=41.55 Aligned_cols=62 Identities=13% Similarity=0.240 Sum_probs=53.8
Q ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 470 SIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVM 531 (596)
Q Consensus 470 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~ 531 (596)
+.+.+++.-++.|++.+...++.-.++.+...++.+++-.|++......+..+|..+.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667888899999999999999999999999999999999999999888888876655443
No 277
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=93.34 E-value=1.2 Score=45.76 Aligned_cols=96 Identities=9% Similarity=0.010 Sum_probs=56.3
Q ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCC
Q 007612 469 LSIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLN 548 (596)
Q Consensus 469 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~ 548 (596)
.++|+....+++......+..+....-+++....+.-|..-|++.+..-+-..+-++ .+.+ +. +--++-...
T Consensus 324 ~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~---iVvd----~~-g~~L~ir~Q 395 (433)
T KOG3810|consen 324 QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTL---IVVD----DR-GLGLDIRTQ 395 (433)
T ss_pred cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheE---EEEc----cc-ccCCCccee
Confidence 367888888999988888888887777777777788888888766553322211111 1111 10 001110111
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHh
Q 007612 549 KGHLDRFYFLLAGLTTVDFVVYIA 572 (596)
Q Consensus 549 ~~~~~~~f~~~a~i~~i~~~~~~~ 572 (596)
---|..+|.+++++.++.....+.
T Consensus 396 ~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 396 FVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred EEEEeehHHHHHHHHHHHHHHHHH
Confidence 123455788888888887665443
No 278
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.27 E-value=2.3 Score=45.92 Aligned_cols=128 Identities=23% Similarity=0.183 Sum_probs=78.9
Q ss_pred HHhhCCChHHHHHHHHH-HHHHHHHHhhhHHHHhhhc--cCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCC-
Q 007612 69 TRVLQQNNAEAANNVSK-WTGTVYIFSLVGAFLSDSY--WGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELT- 144 (596)
Q Consensus 69 ~~~lg~~~~~~~~~~~~-~~~~~~i~~~~~G~laDr~--~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 144 (596)
+..++.+....-.+.++ ...+..++.++.+.+++|. .||++++.++..+..++.++.-+.. | +|.+
T Consensus 270 t~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p--------~dap~ 339 (461)
T KOG3098|consen 270 TRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--P--------NDAPL 339 (461)
T ss_pred hhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--c--------ccCCC
Confidence 33445544433222222 2444555566666666542 3889999888887777766655541 2 2332
Q ss_pred -C---CCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHh
Q 007612 145 -P---CGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSN 213 (596)
Q Consensus 145 -~---~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~ 213 (596)
+ .+...+++....++.-++.|++-++.+.....+++..+ +++ |..+++++..--.++..++-
T Consensus 340 ~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~------~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 340 RPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDD------RAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred CCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCc------hHHHHHHHHHHHHHHHHHHh
Confidence 1 11122334556666778899999999999999999999 455 67777776665555554443
No 279
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.80 E-value=0.93 Score=44.79 Aligned_cols=140 Identities=14% Similarity=0.037 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhhccCch--HHHHHHHHHHHHHHHHHHhhh-ccccccCCCCCCCCCCCCCCCchhHH
Q 007612 79 AANNVSKWTGTVYIFSLVGAFLSDSYWGRF--KTCAIFQGIFVIGLVLLSLSS-YLFLIRPRGCGNELTPCGTHSSLEIC 155 (596)
Q Consensus 79 ~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~--~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (596)
-|.+.+.+.++..+++-+..++..|- ..| ..+.+..++.+..+.+..+.. ..|+ ..++.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~-----------------kes~~ 345 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTSSVSPS-----------------KESPS 345 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHhccCCC-----------------cCCch
Confidence 37888888888888888887877762 222 233333333333322222221 1122 23344
Q ss_pred HHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHH
Q 007612 156 LFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGS 235 (596)
Q Consensus 156 ~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~ 235 (596)
.-+++..++-.+.|.++|...-+=++..|++. |.+.+.++..-.|+..-++-+..-.-..-.+-|..|-++.+.
T Consensus 346 ~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~ 419 (454)
T KOG4332|consen 346 ESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAF 419 (454)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHH
Confidence 44566667778889999999999999999988 999999988887776544321100000113445677777666
Q ss_pred HHHHHHH
Q 007612 236 AFAALVL 242 (596)
Q Consensus 236 ~~~~~~~ 242 (596)
..++.+.
T Consensus 420 ~~~a~i~ 426 (454)
T KOG4332|consen 420 LFVASIL 426 (454)
T ss_pred HHHHHHH
Confidence 5555444
No 280
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=90.36 E-value=27 Score=38.02 Aligned_cols=56 Identities=13% Similarity=-0.061 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhhh-hHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007612 477 QYALIGASEVFMYV-AQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMK 532 (596)
Q Consensus 477 ~~~l~g~~~~~~~~-~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~ 532 (596)
.|+...+-...+.. ..|.++.|....++..+-.++.....++|..+|+.+...+.+
T Consensus 134 FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 134 FYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444 788999999999999999999999999999999998887764
No 281
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=89.63 E-value=1.3 Score=47.92 Aligned_cols=155 Identities=10% Similarity=-0.010 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCChH-HHHHHHHHHHHHHHHHhhhHHHHhhhccCch-HHHHHHHHH
Q 007612 41 VAGIIILLNQGLATLAFFGVGVNLVLFLTRV-LQQNNA-EAANNVSKWTGTVYIFSLVGAFLSDSYWGRF-KTCAIFQGI 117 (596)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-lg~~~~-~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~-~~l~~~~~~ 117 (596)
|.+|...+..++.......+.+-+....+.. .+.++. -.-.....+.++-.+|..+..+.. +-++| +.+.+..+.
T Consensus 269 kki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~--~p~~~~~~l~i~s~~ 346 (437)
T TIGR00939 269 TKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFM--WPDEDSRWLPILSFL 346 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeE--eeCCCccchHHHHHH
Confidence 5566666655555444443333322222222 123332 344566667777777776554321 11222 244444444
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhh
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTH-SSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVA 196 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 196 (596)
-.+...++.+. |.+.|.+ .+ .=.+-+..++..++.|+.+|-..+.+..+..+..++++ |..
T Consensus 347 R~iFIPlf~lc-----------n~~~~~~-~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~ 408 (437)
T TIGR00939 347 RVLFIPLFLLC-----------NYPQRSR-LPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REV 408 (437)
T ss_pred HHHHHHHHHHh-----------cCCcccc-CCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHH
Confidence 44444443332 1111100 00 01235566667889999999999999998888888766 777
Q ss_pred HHHHHHHHHhHHHHHHhhh
Q 007612 197 FFSYFYLALNLGSLFSNTI 215 (596)
Q Consensus 197 ~~~~~~~~~~lg~~~~~~i 215 (596)
+..+...+.++|-.+|..+
T Consensus 409 aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 409 AGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7777777777777776643
No 282
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=85.95 E-value=15 Score=37.33 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=43.4
Q ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 470 SIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLT 528 (596)
Q Consensus 470 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~ 528 (596)
+++.++...++-|+-.+..+...+--+.+..+++.|-.++|...+.-.+|-.+...+.-
T Consensus 341 si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 341 SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 44555555566687777778777778888889999999999888777777766655443
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=85.81 E-value=0.23 Score=50.99 Aligned_cols=115 Identities=10% Similarity=-0.018 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCCCCCC-CchhHHHHHHH
Q 007612 82 NVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRGCGNELTPCGTH-SSLEICLFYLS 160 (596)
Q Consensus 82 ~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 160 (596)
....+.++-.+|..+.++.-=+. .++|.+.+..+.-.+...++.+....|. .| ..+ .-.+-+..++.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~-~~~~~l~~~s~~R~~fiPlf~~cn~~p~---------~~--~~~~~~~~d~~~~i~ 254 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPG-PSPRWLWILSLLRFLFIPLFLLCNVQPR---------PR--YLPVLFNSDAWFIIL 254 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecc-cccccHHHHHHHHHHHHHHHHHHHhhcc---------cc--cCCCcccchHHHHHH
Confidence 45567888888888777642110 1334444443333333333222211111 00 000 01234556677
Q ss_pred HHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhh
Q 007612 161 IYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNT 214 (596)
Q Consensus 161 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~ 214 (596)
.++.|+.+|-..+....+..+..++++ |..+-.+.....++|-.+|..
T Consensus 255 ~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 255 MLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp ------------HHHH--------------------------------------
T ss_pred HHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999988776 666666666666666666654
No 284
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=85.09 E-value=31 Score=35.88 Aligned_cols=97 Identities=9% Similarity=-0.094 Sum_probs=52.3
Q ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHH-----HhcCCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q 007612 469 LSIFWQVPQYALIGASEVFMYVAQLEFF-----NAQAPDGLKSFGSALCM-TSISLGNYVSSLLLTMVMKISTEDHMPGW 542 (596)
Q Consensus 469 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~-----~~~~P~~~rg~~~gl~~-~~~~lg~~lg~~l~~~i~~~~~~~~~~~~ 542 (596)
.+.+.+++.-++.|++..+.+.+.-++. ...+|++..+..-+... ..+.+-.+.+..+...+.+..+.
T Consensus 119 ~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~------ 192 (354)
T PF05631_consen 119 SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF------ 192 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC------
Confidence 4566677777888888888776544333 34566665555544444 22333333443444333332211
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 007612 543 VPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWYKC 579 (596)
Q Consensus 543 ~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~~~ 579 (596)
+....|...+.+.+++.++.....+|..+
T Consensus 193 --------g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 193 --------GPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred --------CCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 11335776677777776665555555433
No 285
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=84.91 E-value=27 Score=37.18 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=50.2
Q ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007612 470 SIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMK 532 (596)
Q Consensus 470 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~ 532 (596)
+.+++-+..+++|++.+. -.+.++++....|++.--++++......-+|..+|..++-.+..
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667777777888887665 67778999999999999999998888888888888777775544
No 286
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.69 E-value=11 Score=37.25 Aligned_cols=57 Identities=14% Similarity=0.219 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHHhHHHHHHhhh--hh-hhcc--cccchHHHHHHHHHHHHHHHHHHhcCcce
Q 007612 194 KVAFFSYFYLALNLGSLFSNTI--LG-YFED--EGMWALGFWVSTGSAFAALVLFLAGTTRY 250 (596)
Q Consensus 194 r~~~~~~~~~~~~lg~~~~~~i--~g-~l~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 250 (596)
|+.......++.++|++++... .+ -..+ ...|++++.+.+++.++-++++.+..++.
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~f 65 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNF 65 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 5555555666778888776432 22 1111 23588888877777666666666655443
No 287
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=83.69 E-value=15 Score=37.78 Aligned_cols=115 Identities=12% Similarity=0.021 Sum_probs=66.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 38 GGWVAGIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
..-|.++++....+.....+-+. .++......++| +.+. +...+.....+++.+.+..++ |-|.++.++...
T Consensus 26 ~~~knv~i~s~~fl~~f~a~~gl-~nlq~~vn~~lg----~~sl--~~~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~~ 97 (390)
T KOG3097|consen 26 GILKNVLILSIAFLLTFTAYLGL-QNLQTSVNYDLG----TVSL--GALYLSLIDSSMFMPLLIRFL-GTKWTMVLAVFP 97 (390)
T ss_pred chhhhhhHHHHHHHHHHHHHHHH-HHHHHHHhcCcc----cchh--hhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHHH
Confidence 34466666666655555554444 334333332222 2111 222344455566666777775 999998877544
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCC
Q 007612 118 FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYD 184 (596)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~ 184 (596)
.... .+.. + ...+..++.+-...|++.+..+.+-.++++++-.
T Consensus 98 Y~ly-----iA~N---l----------------~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 98 YALY-----IAAN---L----------------EPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHH-----HHhh---c----------------chhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 3332 2211 1 1235667777788999999998888888777654
No 288
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=82.74 E-value=80 Score=34.65 Aligned_cols=43 Identities=14% Similarity=-0.032 Sum_probs=38.8
Q ss_pred hhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007612 490 VAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMK 532 (596)
Q Consensus 490 ~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~ 532 (596)
...|.++.|..+.++..+..++.....++|..+++.+...+.+
T Consensus 163 lLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 163 LLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999988887766
No 289
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=78.34 E-value=33 Score=35.62 Aligned_cols=141 Identities=14% Similarity=0.038 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCChH--HHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 007612 49 NQGLATLAFFGVGVNLVLFLTRVLQQNNA--EAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLS 126 (596)
Q Consensus 49 ~~~~~~~~~~~~~~~l~~yl~~~lg~~~~--~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~ 126 (596)
...+.+.++|-+..+... +-++..=++. --|..-...++.++++.++.|++.-++ .|..-++++......+..++.
T Consensus 242 WwAl~scg~~QV~nY~Q~-LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~ 319 (433)
T KOG3810|consen 242 WWALASCGYYQVTNYTQI-LWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFI 319 (433)
T ss_pred HHHHhhchhHHHHHHHHH-HHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhh
Confidence 344455666666555443 2234331111 125555667788889999999998775 666555554442222323332
Q ss_pred hhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHh
Q 007612 127 LSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALN 206 (596)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 206 (596)
.+ ++++.+..+++-++.........+....-+++....+. -+..||+.- -
T Consensus 320 m~---------------------~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~------~gLvFGiNT---F 369 (433)
T KOG3810|consen 320 MA---------------------QTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSEL------FGLVFGINT---F 369 (433)
T ss_pred hh---------------------cccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh------heeeeehHH---H
Confidence 22 12557888888888777777777777777777777766 666666532 2
Q ss_pred HHHHHHhhhhhhhcc
Q 007612 207 LGSLFSNTILGYFED 221 (596)
Q Consensus 207 lg~~~~~~i~g~l~~ 221 (596)
++-++-.++.-.+.|
T Consensus 370 vAl~lQsilT~iVvd 384 (433)
T KOG3810|consen 370 VALILQSILTLIVVD 384 (433)
T ss_pred HHHHHHHhheEEEEc
Confidence 333333444444444
No 290
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=76.07 E-value=68 Score=35.08 Aligned_cols=66 Identities=15% Similarity=0.109 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccc
Q 007612 154 ICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMW 225 (596)
Q Consensus 154 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~ 225 (596)
+.++++.-++..+..-..+.+..++.+++.+|.. =|+-+.+.|...|+|+--...+.-+++|...+
T Consensus 405 f~lvI~~~~l~sf~stvmFVai~AFharISDP~I------GGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~ 470 (544)
T PF13000_consen 405 FLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAI------GGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTV 470 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc------chHHHHHHHHHHhcCCCchHHHHHHHhhhccc
Confidence 3344444455567777778899999999999998 78999999999999876555555555554433
No 291
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=74.65 E-value=58 Score=31.44 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCc-hhHHHHHHHHHH-HHHHHHHHHHHHHHHHHh
Q 007612 471 IFWQVPQYALIGASEVFMYVAQLEFFNAQAPD-GLKSFGSALCMT-SISLGNYVSSLLLTMVMK 532 (596)
Q Consensus 471 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~-~~rg~~~gl~~~-~~~lg~~lg~~l~~~i~~ 532 (596)
.+.++...+..|++.+...+....+..+..|+ +.|+...+.... ...+|..+++.+.+.+..
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555668888888899999999999998 678888888888 577788888866665554
No 292
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=72.62 E-value=7.7 Score=41.00 Aligned_cols=127 Identities=17% Similarity=0.029 Sum_probs=71.4
Q ss_pred HHHHHHHHhhC--C-ChHHHHHHHHH-HHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 007612 63 NLVLFLTRVLQ--Q-NNAEAANNVSK-WTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIGLVLLSLSSYLFLIRPRG 138 (596)
Q Consensus 63 ~l~~yl~~~lg--~-~~~~~~~~~~~-~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (596)
..|.+..+..+ . +..-.-..... +.+...+|.+.+.++-++ +||+..+. .++-.+...++.+... +.
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~-v~lR~lfiPlF~~cn~-~~----- 335 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIP-VLLRLLFIPLFLLCNY-PP----- 335 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHH-HHHHHHHHHHHHHhcc-CC-----
Confidence 45555544332 1 23333444444 778888887777777665 45544433 3333333333332211 10
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHH
Q 007612 139 CGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFS 212 (596)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~ 212 (596)
....-.+-+..+....+.|+.+|-.......+..+..|+++ +..+-.+.......|-..|
T Consensus 336 --------~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e------~e~aG~~m~~fl~~Gl~~G 395 (406)
T KOG1479|consen 336 --------LPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE------KEAAGNLMVFFLVGGLALG 395 (406)
T ss_pred --------CCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH------HHHHHHHHHHHHHHHHHHh
Confidence 01111345667778889999999999999999988888777 4444444444444444443
No 293
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=66.13 E-value=2.1e+02 Score=31.34 Aligned_cols=44 Identities=11% Similarity=-0.058 Sum_probs=37.9
Q ss_pred hhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007612 489 YVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMK 532 (596)
Q Consensus 489 ~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~ 532 (596)
.-..|.++.|+...++..+-.++++...+++..++..+...+.+
T Consensus 166 S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 166 SLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34677899999999999999999999999999888888876654
No 294
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=63.22 E-value=2.8 Score=42.96 Aligned_cols=58 Identities=14% Similarity=0.251 Sum_probs=3.7
Q ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 007612 470 SIFWQVPQYALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLL 527 (596)
Q Consensus 470 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~ 527 (596)
+-++.++.++++|+..|........+..+..+++.|..+..+..+.-.+|-.+|..+.
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --------------------HHHH----------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667788999999999999999999999999999998888888888877776553
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.80 E-value=29 Score=29.17 Aligned_cols=34 Identities=15% Similarity=0.023 Sum_probs=23.1
Q ss_pred HHHHHHhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 007612 88 GTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVIG 121 (596)
Q Consensus 88 ~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~~ 121 (596)
+...+.....||+-|||.|.++..+|..++...+
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 3344444566899999999999877765544443
No 296
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=61.36 E-value=28 Score=38.94 Aligned_cols=139 Identities=14% Similarity=0.112 Sum_probs=81.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhcc----cCCCCCCCceeehhHHHHHHHHHHHHHHhhhhhHHHHHHhcCC
Q 007612 427 ELQRMGIGLVIAIVAMLAAGIVECYR-LKYAKT----ECKHCEGASSLSIFWQVPQYALIGASEVFMYVAQLEFFNAQAP 501 (596)
Q Consensus 427 ~~~~i~ig~~l~~v~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~P 501 (596)
+...+.++.++..+++..+....... .....+ .+..|+.........+...+-+.++|.+..-|...++-.++++
T Consensus 103 ry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd 182 (571)
T KOG1237|consen 103 RYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFD 182 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccC
Confidence 34457777777777755444332221 111111 1112333333333445556677788888889999999999998
Q ss_pred ch----hHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcc
Q 007612 502 DG----LKS--FGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAK 575 (596)
Q Consensus 502 ~~----~rg--~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~ 575 (596)
+. .+. .-...+.+..++|..++..+..++-+ ..++...|....+.++++.++++...+
T Consensus 183 ~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~----------------~~~w~lgf~i~~~~~~lai~iF~~g~~ 246 (571)
T KOG1237|consen 183 ELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD----------------NVGWKLGFGIPTVLNALAILIFLPGFP 246 (571)
T ss_pred ccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh----------------cccceeeccHHHHHHHHHHHHHHcCce
Confidence 32 222 44555666666777666655554422 223344677778888888888777766
Q ss_pred cccccc
Q 007612 576 WYKCIE 581 (596)
Q Consensus 576 ~~~~~~ 581 (596)
.++.+.
T Consensus 247 ~y~~~~ 252 (571)
T KOG1237|consen 247 FYRYKK 252 (571)
T ss_pred eEEeeC
Confidence 665443
No 297
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=59.85 E-value=83 Score=31.18 Aligned_cols=65 Identities=12% Similarity=0.020 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcccc
Q 007612 503 GLKSFGSALCMTSISLGNYVSSLLLTMVMKISTEDHMPGWVPGNLNKGHLDRFYFLLAGLTTVDFVVYIACAKWY 577 (596)
Q Consensus 503 ~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~i~~i~~~~~~~~~~~~ 577 (596)
-+|..+.|+.....+..+.+..+..+-+ +|+..+.+.......=++..++.+++..++.++.++.
T Consensus 75 ii~~iGLglg~liW~s~n~l~Gw~~grf----------GlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 75 IIKTIGLGLGMLIWGSVNCLTGWASGRF----------GLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHHhhc----------eeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 3355555555555555555554555422 2332111122222233455666667777776665554
No 298
>PRK03612 spermidine synthase; Provisional
Probab=59.22 E-value=1.4e+02 Score=33.15 Aligned_cols=54 Identities=17% Similarity=0.150 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhhhhHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007612 478 YALIGASEVFMYVAQLEFFNAQAPDGLKSFGSALCMTSISLGNYVSSLLLTMVMK 532 (596)
Q Consensus 478 ~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~ 532 (596)
.++.++-.++..|....+..+.. ++.-|...|-....+.+|+.+|+++.+++.-
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 34456666666666655444332 2234566677778888999999998887654
No 299
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=54.86 E-value=50 Score=34.82 Aligned_cols=69 Identities=16% Similarity=0.058 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHHHHhccccccchhhhhhccCCccccccccchhhHHHHHHHHHhHHHHHHhhhhhhhcccccchH
Q 007612 153 EICLFYLSIYFVALGNGGYQPNIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLFSNTILGYFEDEGMWAL 227 (596)
Q Consensus 153 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~ 227 (596)
.+.+.+..-.+.+...-..+.+..++.+++.|+.. -|+-+++.+...|+|+---..+..+++|..++..
T Consensus 368 ~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~i------ggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~ 436 (510)
T KOG3574|consen 368 YYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAI------GGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQ 436 (510)
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccc------CccHHHHHHHHHHhcCCcHHHHHHHhcccCceee
Confidence 34444444445444445556677888899999988 8899999999999999888888888888777664
No 300
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=48.64 E-value=30 Score=34.34 Aligned_cols=64 Identities=19% Similarity=0.029 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHH---------hhhccCchHHH
Q 007612 46 ILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFL---------SDSYWGRFKTC 111 (596)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~l---------aDr~~Gr~~~l 111 (596)
--+..+..-++.-.+.+++..|++ +.|.++.+.+.+..+..+...+..++.|.. -||+ |||+..
T Consensus 22 yGvGHmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~w 94 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSW 94 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeee
Confidence 345667777777778899999987 567888877888888899999999998744 5785 887653
No 301
>COG3619 Predicted membrane protein [Function unknown]
Probab=47.34 E-value=2.8e+02 Score=27.00 Aligned_cols=61 Identities=16% Similarity=0.132 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhh
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTR-------VLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDS 103 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~-------~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr 103 (596)
..+.+.+.+.+..+|......+..+.+. .+.-++...........+...++...+..+..|
T Consensus 14 ~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~ 81 (226)
T COG3619 14 LLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRR 81 (226)
T ss_pred HHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555554444444444332 122233334444455555555665555555554
No 302
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=41.13 E-value=1.4e+02 Score=21.66 Aligned_cols=32 Identities=6% Similarity=0.120 Sum_probs=21.4
Q ss_pred HHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 86 WTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 86 ~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
...+..+.....|+..|++.+.++..++..++
T Consensus 9 ~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 9 TMAAPILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 34445566667889999887887776554433
No 303
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=39.72 E-value=3.3e+02 Score=25.74 Aligned_cols=34 Identities=9% Similarity=0.031 Sum_probs=16.7
Q ss_pred HHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHH
Q 007612 201 FYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGS 235 (596)
Q Consensus 201 ~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~ 235 (596)
.+...-++..+|..+++.+.+..+. +..+++.+.
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~ 200 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGF-WALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 3334445555555555566555553 344444433
No 304
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.70 E-value=1.9e+02 Score=24.50 Aligned_cols=34 Identities=9% Similarity=0.177 Sum_probs=25.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 007612 502 DGLKSFGSALCMTSISLGNYVSSLLLTMVMKIST 535 (596)
Q Consensus 502 ~~~rg~~~gl~~~~~~lg~~lg~~l~~~i~~~~~ 535 (596)
.+.++.++++-...-.+++.+-.+.+|++.+...
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4567888888777777877777788887776553
No 305
>PRK10263 DNA translocase FtsK; Provisional
Probab=38.43 E-value=1.8e+02 Score=35.64 Aligned_cols=26 Identities=8% Similarity=-0.075 Sum_probs=13.5
Q ss_pred HHHHHHhhhhhhhcccccchHHHHHH
Q 007612 207 LGSLFSNTILGYFEDEGMWALGFWVS 232 (596)
Q Consensus 207 lg~~~~~~i~g~l~~~~~~~~~f~~~ 232 (596)
.|+++|..+...+...+|.....++.
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LIL 167 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIAL 167 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHH
Confidence 36666666655555555544333333
No 306
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=30.93 E-value=5e+02 Score=25.95 Aligned_cols=22 Identities=18% Similarity=0.233 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHHHHhccccccc
Q 007612 153 EICLFYLSIYFVALGNGGYQPN 174 (596)
Q Consensus 153 ~~~~l~~~~~l~g~g~g~~~~~ 174 (596)
....+++.-++.|++.=+.++.
T Consensus 203 ~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 203 GFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHHHHHHHHhhhHH
Confidence 3556777777777654344433
No 307
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=26.85 E-value=1.4e+02 Score=23.63 Aligned_cols=42 Identities=17% Similarity=0.388 Sum_probs=25.1
Q ss_pred HHHHHHHHhHHHHHHhhhhhhhcccccchHHHHHHHHHHHHHHHH
Q 007612 198 FSYFYLALNLGSLFSNTILGYFEDEGMWALGFWVSTGSAFAALVL 242 (596)
Q Consensus 198 ~~~~~~~~~lg~~~~~~i~g~l~~~~~~~~~f~~~~~~~~~~~~~ 242 (596)
--+++....++++++- +.|++.+. .+..+++.++..++++++
T Consensus 10 e~l~~~il~~~~iisf-i~Gy~~q~--~~~~~~~~~~g~~~~~lv 51 (76)
T PF06645_consen 10 EKLMQYILIISAIISF-IVGYITQS--FSYTFYIYGAGVVLTLLV 51 (76)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHhh
Confidence 3445556667777764 67777665 455666665555544443
No 308
>COG2119 Predicted membrane protein [Function unknown]
Probab=26.57 E-value=4e+02 Score=25.01 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=25.1
Q ss_pred HHHHHHHHhhhHHHHhhhccCchHHHHHHHHHHHH
Q 007612 86 WTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGIFVI 120 (596)
Q Consensus 86 ~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~~~~ 120 (596)
..++..++.+.+.++++|+ --|++-.++.+++.+
T Consensus 143 ~~l~s~laVl~G~~ia~ki-~~r~l~~~aallFl~ 176 (190)
T COG2119 143 MILASVLAVLLGKLIAGKL-PERLLRFIAALLFLI 176 (190)
T ss_pred HHHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHH
Confidence 3556777888889999996 888887776555444
No 309
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=25.66 E-value=8.1e+02 Score=25.84 Aligned_cols=121 Identities=12% Similarity=0.059 Sum_probs=67.2
Q ss_pred CCchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHH----H
Q 007612 38 GGWVAGIIILLN-QGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTC----A 112 (596)
Q Consensus 38 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l----~ 112 (596)
.+|+.+..+++. +....+.+-....-+..|+ +|-..-+.+.+++.+.....+++.+.=++.|.- -.-+.+ +
T Consensus 6 ~~~~alL~laVf~~aa~GlvyElal~tLatyL---lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vEll 81 (508)
T COG4262 6 NRWRALLLLAVFVCAACGLVYELALGTLATYL---LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELL 81 (508)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCceeehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHH
Confidence 445554444333 2223333333334445554 455566778888888888888888777776642 222111 1
Q ss_pred HHHHH-HHHHHHHHHhhhccccccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhhhc
Q 007612 113 IFQGI-FVIGLVLLSLSSYLFLIRPRGCGNELTPCGTHSSLEICLFYLSIYFVALGNGGYQPNIATFGAD 181 (596)
Q Consensus 113 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~ 181 (596)
++++. +....+-+.++.. ..+..+.++++-+++|.-.|.-.|....+..+
T Consensus 82 lgligg~Sa~~ly~~FA~~-------------------~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 82 LGLIGGVSAAALYLLFALE-------------------SAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHhccchHHHHHHHHHhc-------------------cchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 22211 1111111122211 11246778888899999999999999988877
No 310
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.67 E-value=2.4e+02 Score=23.65 Aligned_cols=23 Identities=4% Similarity=0.031 Sum_probs=13.0
Q ss_pred HHHhhhHHHHhhhccCchHHHHH
Q 007612 91 YIFSLVGAFLSDSYWGRFKTCAI 113 (596)
Q Consensus 91 ~i~~~~~G~laDr~~Gr~~~l~~ 113 (596)
.+...+.|+.-|+.++-.+.+.+
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl 78 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTL 78 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHH
Confidence 34445566777776566554433
No 311
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.08 E-value=2e+02 Score=24.05 Aligned_cols=16 Identities=25% Similarity=0.362 Sum_probs=9.3
Q ss_pred HHHHHHHHHHhhCCCh
Q 007612 61 GVNLVLFLTRVLQQNN 76 (596)
Q Consensus 61 ~~~l~~yl~~~lg~~~ 76 (596)
..++-.|+.+.++-++
T Consensus 59 G~~lG~WLD~~~~t~~ 74 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPF 74 (100)
T ss_pred HHHHHHHHHhhcCCCc
Confidence 3445567777666544
No 312
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=22.03 E-value=43 Score=29.43 Aligned_cols=10 Identities=0% Similarity=-0.223 Sum_probs=4.4
Q ss_pred hHHHHHHHHH
Q 007612 226 ALGFWVSTGS 235 (596)
Q Consensus 226 ~~~f~~~~~~ 235 (596)
||++++.+++
T Consensus 1 RW~l~~iii~ 10 (130)
T PF12273_consen 1 RWVLFAIIIV 10 (130)
T ss_pred CeeeHHHHHH
Confidence 3455444433
No 313
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=21.40 E-value=1.6e+02 Score=26.77 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=22.4
Q ss_pred chhhhhhccCCccccccccchhhHHHHHHHHHhHHHHH
Q 007612 174 NIATFGADQYDEEDAKEGHSKVAFFSYFYLALNLGSLF 211 (596)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~ 211 (596)
..+.+++.-.+++. -|+.+|+-.+-.|++-..
T Consensus 114 isYGilSaSWD~~r------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 114 ISYGILSASWDPER------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhhcccccCCCC------CCCcccHHHHHHhHHHHH
Confidence 34555566667776 678999988888886543
No 314
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=21.37 E-value=4.9e+02 Score=27.68 Aligned_cols=74 Identities=15% Similarity=0.024 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhccCchHHHHHHHHH
Q 007612 43 GIIILLNQGLATLAFFGVGVNLVLFLTRVLQQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRFKTCAIFQGI 117 (596)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~~~~~~~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~l~~~~~~ 117 (596)
.+.+...++..++.--++-.....|+..-.|-+-.-.+.-...-.....+..++.|..-|+. .|+|++...+.+
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~-sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGM-SRVKVIQTWLLL 102 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcch-hHHHHHHHHHhh
Confidence 35566777777777666666667777533332211111111222334455566677888996 999998776553
Done!