BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007613
(596 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WLC6|PP349_ARATH Pentatricopeptide repeat-containing protein At4g34830,
chloroplastic OS=Arabidopsis thaliana
GN=At4g34830/At4g34820 PE=2 SV=2
Length = 1089
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/585 (69%), Positives = 490/585 (83%)
Query: 6 KNMLQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHA 65
++M QFP N + N E +YNRL+R GRI +CI LLED++++ LLDMDK+YHA
Sbjct: 381 ESMPQFPARNFELHNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHA 440
Query: 66 RFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKA 125
FF CK Q+A+KEAFRF KL+ NPT+STFNMLMSVCASS+D EGA VLRLVQE+G+ A
Sbjct: 441 SFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTA 500
Query: 126 DCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAY 185
DCKLYTTLI++CAKSGKVDAMFEVFH+M N+G+E N+HT+GALIDGCA+AGQVAKAFGAY
Sbjct: 501 DCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY 560
Query: 186 GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACA 245
GI+RSKNVKPDRVVFNALI+ACGQSGAVDRAFDVLAEM AE HP+DPDHI+IGALMKAC
Sbjct: 561 GILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC 620
Query: 246 NAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEV 305
NAGQV+RA+EVY+MIHKY I+GTPEVYTIA+N CS++GDW+FACS+Y DM +K V PDEV
Sbjct: 621 NAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEV 680
Query: 306 FLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHM 365
F SALID AGHA ++ AF ILQ+AK+QGI +G ISYSSLMGAC NAK+W+KALELYE +
Sbjct: 681 FFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKI 740
Query: 366 KSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDV 425
KSIKL+PT+STMNALITALC+G+QLPK ME L ++K+LGL PNTITYS+L++A ERKDD
Sbjct: 741 KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDF 800
Query: 426 EVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSL 485
EV LLSQAK DGV PNL+M +CI +C RR+EKA E V+SF SGRPQIENKWTS+
Sbjct: 801 EVSFKLLSQAKGDGVSPNLIMCRCITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSM 860
Query: 486 ALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNLCSLID 545
ALMVYRE I GT+PT EVVS+VLGCLQLP++A +R+RL+ LG++ + K+ N+ L+D
Sbjct: 861 ALMVYRETISGGTVPTTEVVSQVLGCLQLPHDAALRDRLISTLGINISSQKQHNIFPLVD 920
Query: 546 GFGEYDPRAFSLLEEAASFGIVPCVSFKEIPVVVDARKLEIHTAK 590
GFGEYDPRAFSLLEEA S G++P VSF +IP+ D +L + A+
Sbjct: 921 GFGEYDPRAFSLLEEATSLGVLPSVSFNKIPLFFDTTELPKNVAE 965
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 211/449 (46%), Gaps = 14/449 (3%)
Query: 28 QLHSYNRLIR----QGRISECIDLLEDM--ERKGLLDMDKVYHAR----FFNVCKSQKAI 77
+ SYN L++ + R E ++LL M +R G D V + FF S KA
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216
Query: 78 KEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTC 137
P + T+N +++ ++ + A +VL + + G+ DC Y +++
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276
Query: 138 AKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDR 197
SG+ +M + G+EP+V TY L+D K G+ +A + M + +KP+
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336
Query: 198 VVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVY 257
+ L+ GA+ +L M + + PDH L+ A A G+VD+A V+
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVR--NGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 258 KMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHA 317
+ + + Y I ++G E A ++ M +G+ P + ++LI
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 318 GKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTM 377
K E A E++ E ++GI + I ++S++ + ++ +L+E M I +KP V T
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 378 NALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKE 437
N LI C ++ + M++LS M S+GL PNT+TYS L+ + +E L+L + +
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 438 DGVIPNLVMFKCII-GMC-SRRYEKARTL 464
GV P+++ + I+ G+ +RR A+ L
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 192/425 (45%), Gaps = 12/425 (2%)
Query: 29 LHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFN-VCKSQKAIKEAFRFF--- 84
LH Y G+ E I L+ M G+ + D V ++ + +CK+ + + EA + F
Sbjct: 273 LHGY---CSSGQPKEAIGFLKKMRSDGV-EPDVVTYSLLMDYLCKNGRCM-EARKIFDSM 327
Query: 85 -KLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKV 143
K P ++T+ L+ A+ +L L+ G+ D +++ LI AK GKV
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 144 DAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNAL 203
D VF +M G+ PN TYGA+I K+G+V A + M + + P +V+N+L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 204 ITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKY 263
I +RA +++ EM + + I +++ + G+V + ++++++ +
Sbjct: 448 IHGLCTCNKWERAEELILEMLD--RGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Query: 264 NIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAA 323
+K Y IN G + A + M G+ P+ V S LI+ ++E A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 324 FEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA 383
+ +E ++ G+S II+Y+ ++ + A ELY + + +ST N ++
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 384 LCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPN 443
LC +++ ++ + L T++I++ A + + L +G++PN
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 444 LVMFK 448
++
Sbjct: 686 YWTYR 690
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 164/387 (42%), Gaps = 43/387 (11%)
Query: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLIT-TCAKSGKVDAMF 147
P L T+ +L+ C + + F L V + G + D +T L+ CA DAM
Sbjct: 84 TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143
Query: 148 EVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIM---RSKNVKPDRVVFNALI 204
V M G PNV +Y L+ G + +A +M R PD V + +I
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 205 TACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYN 264
+ G D+A+ EM + PD +T +++ A A +D+A EV
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLD--RGILPDVVTYNSIIAALCKAQAMDKAMEVL------- 254
Query: 265 IKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAF 324
+ M K GV+PD + ++++ +G+ + A
Sbjct: 255 ----------------------------NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 286
Query: 325 EILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITAL 384
L++ ++ G+ +++YS LM +A ++++ M LKP ++T L+
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGY 346
Query: 385 CDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNL 444
L + +L M G+ P+ +SIL+ A ++ V+ +++ S+ ++ G+ PN
Sbjct: 347 ATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNA 406
Query: 445 VMFKCIIG-MC-SRRYEKARTLNEHVL 469
V + +IG +C S R E A E ++
Sbjct: 407 VTYGAVIGILCKSGRVEDAMLYFEQMI 433
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 155/335 (46%), Gaps = 13/335 (3%)
Query: 150 FHEMVNAG---IEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITA 206
++ M AG + P++ TYG LI C +AG++ F A G + K + D + F L+
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 207 CGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIK 266
A D++ E+ + P+ + L+K + + A E+ M+
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCI-PNVFSYNILLKGLCDENRSQEALELLHMMADDRGG 190
Query: 267 GTPE---VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAA 323
G+P YT IN + GD + A S Y +M +G++PD V +++I A ++ A
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 324 FEILQEAKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALIT 382
E+L G+ ++Y+S++ G CS+ + ++A+ + M+S ++P V T + L+
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP-KEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Query: 383 ALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIP 442
LC + + ++ M GL P TY LL K + LL +G+ P
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369
Query: 443 NLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQ 477
+ +F +I C+ Y K +++ +L F+ R Q
Sbjct: 370 DHYVFSILI--CA--YAKQGKVDQAMLVFSKMRQQ 400
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 202/411 (49%), Gaps = 12/411 (2%)
Query: 47 LLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN----PTLSTFNMLM-SV 101
+ +M KG + Y +C +++ I EA F + + PT+ T+ +L+ S+
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARR-IDEAMDLFVKMKDDECFPTVRTYTVLIKSL 333
Query: 102 CASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPN 161
C S + SE A +++ ++E G+K + YT LI + K + E+ +M+ G+ PN
Sbjct: 334 CGSERKSE-ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Query: 162 VHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLA 221
V TY ALI+G K G + A +M S+ + P+ +N LI +S V +A VL
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLN 451
Query: 222 EMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQ 281
+M V PD +T +L+ +G D A + +++ + YT I+ +
Sbjct: 452 KMLE--RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 282 TGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIIS 341
+ E AC ++D + +KGV P+ V +ALID AGKV+ A +L++ ++ ++
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 342 YSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDM 400
+++L+ G C++ K ++A L E M I L+PTVST LI L M
Sbjct: 570 FNALIHGLCADGK-LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 401 KSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
S G P+ TY+ + R+ + ++++ +E+GV P+L + +I
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 215/505 (42%), Gaps = 33/505 (6%)
Query: 31 SYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKS--QKAIKEAFRFF 84
+YN LI ++G I + +D++E ME + L + Y+ CKS KA+ +
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML 454
Query: 85 KLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVD 144
+ P + T+N L+ S + + A+++L L+ + GL D YT++I + KS +V+
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 145 AMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALI 204
++F + G+ PNV Y ALIDG KAG+V +A M SKN P+ + FNALI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 205 TACGQSGAVDRAFDVLAEMNAEV--HP-VDPDHITIGALMKACANAGQVDRAREVYKMIH 261
G + A +L E ++ P V D I I L+K G D A ++ +
Sbjct: 575 HGLCADGKLKEA-TLLEEKMVKIGLQPTVSTDTILIHRLLK----DGDFDHAYSRFQQML 629
Query: 262 KYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVE 321
K YT I + G A + M + GV PD S+LI G G+
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 322 AAFEILQEAKNQGISVGIISYSSLMG------------------ACSNAKNWQKALELYE 363
AF++L+ ++ G ++ SL+ A SN + +EL E
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 364 HMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDM-KSLGLCPNTITYSILLVACERK 422
M + P + LI +C+ L +V M ++ G+ P+ + ++ LL C +
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 423 DDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIENKW 482
++ G +P L K +I ++ EK R + G + E W
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 483 TSLALMVYREAIVAGTIPTVEVVSK 507
+ V ++ +V V+ K
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEK 894
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 211/498 (42%), Gaps = 27/498 (5%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P + T+N +++ + E A Q + + EAGL D YT+LI + +D+ F+V
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
F+EM G N Y LI G A ++ +A + M+ P + LI +
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTP 269
S A +++ EM E + P+ T L+ + + + ++ARE+ + + +
Sbjct: 336 SERKSEALNLVKEM--EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 270 EVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHA-GKVEAAFEILQ 328
Y IN + G E A V + M + + P+ + LI G+ V A +L
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI--KGYCKSNVHKAMGVLN 451
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
+ + + +++Y+SL+ + N+ A L M L P T ++I +LC
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
++ + ++ ++ G+ PN + Y+ L+ + V+ ++L + +PN + F
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 449 CII-GMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLALMV-----------YREAIVA 496
+I G+C+ K TL E + +P + + ++ +++ + +
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 497 GTIPTVEVVSKVLGCL----QLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYDP 552
GT P + + +L D+ ++ EN GVS D S SLI G+G+
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN-GVSPDLFTYS---SLIKGYGDLGQ 687
Query: 553 R--AFSLLEEAASFGIVP 568
AF +L+ G P
Sbjct: 688 TNFAFDVLKRMRDTGCEP 705
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 23/308 (7%)
Query: 155 NAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVD 214
N + +V++Y +L+ G V F +M I +C G
Sbjct: 116 NPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLM---------------IKSCDSVGDAL 160
Query: 215 RAFDVLAEMNAEVHPVDPDHITIG---ALMKACANAGQVDRAREVYKMIHKYNIKGTPEV 271
D+ +MN + + IG L+ + A G VD ++VY + K P +
Sbjct: 161 YVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY--MEMLEDKVCPNI 218
Query: 272 YTI--AINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQE 329
YT +N + G+ E A + + G+ PD ++LI +++AF++ E
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389
+G ++Y+ L+ A+ +A++L+ MK + PTV T LI +LC ++
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 449
+ + ++ +M+ G+ PN TY++L+ + + E LL Q E G++PN++ +
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 450 II-GMCSR 456
+I G C R
Sbjct: 399 LINGYCKR 406
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 143/368 (38%), Gaps = 61/368 (16%)
Query: 37 RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAF----RFFKLVPNPTL 92
+ G++ E +LE M K L ++A +C K +KEA + K+ PT+
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK-LKEATLLEEKMVKIGLQPTV 602
Query: 93 STFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHE 152
ST +L+ D + A+ + + +G K D YTT I T + G++ ++ +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 153 MVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALIT------- 205
M G+ P++ TY +LI G GQ AF MR +P + F +LI
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722
Query: 206 ---------ACGQSGAVDRAFDVLAEMNAEV--HPVDPDHITIGALMKACANAGQVDRAR 254
C S ++ FD + E+ ++ H V P+ + L+ G + A
Sbjct: 723 GKQKGSEPELCAMSNMME--FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 255 EVYKMIHKYN-IKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIP----------- 302
+V+ + + I + V+ ++CC + A V DDM G +P
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Query: 303 ------------------------DEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVG 338
DE+ +ID G G VEA +E+ + G
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFS 900
Query: 339 IISYSSLM 346
+YS L+
Sbjct: 901 SQTYSLLI 908
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 165/395 (41%), Gaps = 52/395 (13%)
Query: 130 YTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMR 189
Y +L+T +G V +F++ M+ + Y ++D C K + + Y ++
Sbjct: 126 YASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALY--VLDLCRKMNKDERFELKYKLII 183
Query: 190 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQ 249
+N L+ + + G VD V EM + V P+ T ++ G
Sbjct: 184 G--------CYNTLLNSLARFGLVDEMKQVYMEMLED--KVCPNIYTYNKMVNGYCKLGN 233
Query: 250 VDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSA 309
V+ A + I + + YT I Q D + A V+++M KG +EV +
Sbjct: 234 VEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH 293
Query: 310 LIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIK 369
LI A +++ A ++ + K+ + +Y+ L+ + ++ +AL L + M+
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 370 LKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVA-CER------- 421
+KP + T LI +LC + K E+L M GL PN ITY+ L+ C+R
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 422 --------------------------KDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMC 454
K +V + +L++ E V+P++V + +I G C
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 455 -SRRYEKARTLNEHVLSFNSGRPQIENKWTSLALM 488
S ++ A L LS + R + ++WT +++
Sbjct: 474 RSGNFDSAYRL----LSLMNDRGLVPDQWTYTSMI 504
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 23 HDVSEQLHSYNRLI----RQGRISECIDLLEDMER-KGLLDMDKVYHARFFNVCKSQKAI 77
H V+ SY +LI G + + + M+R +G+ + V++A CK +K
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 78 KEAFRFFKLVPN-------PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLY 130
+ A K+V + P L + +L+ + E V + + + G D +
Sbjct: 814 EAA----KVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 131 TTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDG 171
+I K G V+A +E+F+ M G + + TY LI+G
Sbjct: 870 KIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 207/461 (44%), Gaps = 35/461 (7%)
Query: 16 GKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQK 75
G + N + S + +Y R G E I + M+ GL Y+A K
Sbjct: 262 GGYGNTVYAFSALISAYGR---SGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318
Query: 76 AIKEAFRFFKLVP----NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYT 131
K+ +FF + P TFN L++VC+ E A + + ++ D Y
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 132 TLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSK 191
TL+ K G++D FE+ +M I PNV +Y +IDG AKAG+ +A +G MR
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 192 NVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVD 251
+ DRV +N L++ + G + A D+L EM A V + D +T AL+ G+ D
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREM-ASVG-IKKDVVTYNALLGGYGKQGKYD 496
Query: 252 RAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALI 311
++V+ + + ++ Y+ I+ S+ G ++ A ++ + G+ D V SALI
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 312 DFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQK-------------- 357
D G V +A ++ E +GIS +++Y+S++ A + +
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSS 616
Query: 358 ----ALELYEHMKSIKLKPTVST-MNALITALCDG--DQLPKTMEVLSDMKSLGLCPNTI 410
AL E + I+L ++T N T C+ +L +EV M L + PN +
Sbjct: 617 SALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVV 676
Query: 411 TYSILLVACERKDDVEVGLMLLSQ-----AKEDGVIPNLVM 446
T+S +L AC R + E MLL + K GV+ L+M
Sbjct: 677 TFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLM 717
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 162/331 (48%), Gaps = 9/331 (2%)
Query: 130 YTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAG----QVAKAFGAY 185
++ LI+ +SG + VF+ M G+ PN+ TY A+ID C K G QVAK F
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE- 329
Query: 186 GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACA 245
M+ V+PDR+ FN+L+ C + G + A ++ EM ++ D + L+ A
Sbjct: 330 --MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR--RIEQDVFSYNTLLDAIC 385
Query: 246 NAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEV 305
GQ+D A E+ + I Y+ I+ ++ G ++ A +++ +M G+ D V
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 306 FLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHM 365
+ L+ G+ E A +IL+E + GI +++Y++L+G + + +++ M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 366 KSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDV 425
K + P + T + LI G + ME+ + KS GL + + YS L+ A + V
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 426 EVGLMLLSQAKEDGVIPNLVMFKCIIGMCSR 456
+ L+ + ++G+ PN+V + II R
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 158/328 (48%), Gaps = 9/328 (2%)
Query: 128 KLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGI 187
KL + +I+T + GKV +F G V+ + ALI ++G +A +
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 188 MRSKNVKPDRVVFNALITACGQSG----AVDRAFDVLAEMNAEVHPVDPDHITIGALMKA 243
M+ ++P+ V +NA+I ACG+ G V + FD EM + + V PD IT +L+
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD---EM--QRNGVQPDRITFNSLLAV 348
Query: 244 CANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPD 303
C+ G + AR ++ + I+ Y ++ + G + A + M K ++P+
Sbjct: 349 CSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPN 408
Query: 304 EVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYE 363
V S +ID AG+ + A + E + GI++ +SY++L+ + ++AL++
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 364 HMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKD 423
M S+ +K V T NAL+ + + +V ++MK + PN +TYS L+ +
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 424 DVEVGLMLLSQAKEDGVIPNLVMFKCII 451
+ + + + K G+ ++V++ +I
Sbjct: 529 LYKEAMEIFREFKSAGLRADVVLYSALI 556
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 191/442 (43%), Gaps = 61/442 (13%)
Query: 91 TLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG-KVDAMFEV 149
T+ F+ L+S S E A V ++E GL+ + Y +I C K G + + +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
F EM G++P+ T+ +L+ C++ G A + M ++ ++ D +N L+ A +
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTP 269
G +D AF++LA+M V + P+ ++ ++ A AG+ D A ++ + I
Sbjct: 387 GGQMDLAFEILAQM--PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 270 EVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQE 329
Y ++ ++ G E A + +M G+ D V +AL+ G GK + ++ E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389
K + + +++YS+L+ S +++A+E++ KS L+ V +ALI ALC
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERK--------------------------- 422
+ + ++ +M G+ PN +TY+ ++ A R
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTE 624
Query: 423 ----------------------DDVEVGLMLLS-------QAKEDGVIPNLVMFKCIIGM 453
D E G+ LS + + + PN+V F I+
Sbjct: 625 TEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684
Query: 454 CSR--RYEKARTLNEHVLSFNS 473
CSR +E A L E + F++
Sbjct: 685 CSRCNSFEDASMLLEELRLFDN 706
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 221/468 (47%), Gaps = 16/468 (3%)
Query: 26 SEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFK 85
++ L ++R R G E + LLE M RKG + D + + + + I +A R +
Sbjct: 90 TQMLKIFHRSCRSGNYIESLHLLETMVRKG-YNPDVILCTKLIKGFFTLRNIPKAVRVME 148
Query: 86 LVP---NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGK 142
++ P + +N L++ + A +VL ++ D Y +I + GK
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 202
+D +V +++++ +P V TY LI+ G V +A M S+ +KPD +N
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 203 LITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHK 262
+I + G VDRAF+++ N E+ +PD I+ L++A N G+ + ++ M
Sbjct: 269 IIRGMCKEGMVDRAFEMVR--NLELKGCEPDVISYNILLRALLNQGKWEEGEKL--MTKM 324
Query: 263 YNIKGTPEV--YTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKV 320
++ K P V Y+I I + G E A ++ M +KG+ PD LI G++
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 321 EAAFEILQEAKNQGISVGIISYSSLMGA-CSNAKNWQKALELYEHMKSIKLKPTVSTMNA 379
+ A E L+ + G I++Y++++ C N K Q ALE++ + + P S+ N
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ-ALEIFGKLGEVGCSPNSSSYNT 443
Query: 380 LITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDG 439
+ +AL + + ++ +M S G+ P+ ITY+ ++ R+ V+ LL +
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 440 VIPNLVMFKCI-IGMC-SRRYEKARTLNEHVLSFNSGRPQIENKWTSL 485
P++V + + +G C + R E A + E ++ N RP E +T L
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG-NGCRPN-ETTYTVL 549
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 154/334 (46%), Gaps = 5/334 (1%)
Query: 119 QEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQV 178
Q G + D ++ +C +SG + MV G P+V LI G +
Sbjct: 83 QSLGFR-DTQMLKIFHRSC-RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNI 140
Query: 179 AKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIG 238
KA I+ K +PD +NALI + +D A VL M ++ PD +T
Sbjct: 141 PKAVRVMEILE-KFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK--DFSPDTVTYN 197
Query: 239 ALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKK 298
++ + + G++D A +V + N + T YTI I G + A + D+M +
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 299 GVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKA 358
G+ PD + +I G V+ AFE+++ + +G +ISY+ L+ A N W++
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 359 LELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVA 418
+L M S K P V T + LIT LC ++ + M +L MK GL P+ +Y L+ A
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 419 CERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIG 452
R+ ++V + L DG +P++V + ++
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 204/427 (47%), Gaps = 9/427 (2%)
Query: 40 RISECIDLLEDMERKGL----LDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTF 95
RIS+ + L++ M G + + H F + K+ +A+ R + P L T+
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTY 228
Query: 96 NMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVN 155
++++ D++ A +L ++ A ++AD ++ T+I + K VD +F EM
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 156 AGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDR 215
GI PNV TY +LI G+ + A M K + P+ V FNALI A + G
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 216 AFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIA 275
A + +M +DPD T +L+ ++D+A+++++ + + Y
Sbjct: 349 AEKLYDDMIKR--SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 276 INCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGI 335
I ++ E ++ +M+ +G++ D V + LI H G + A ++ ++ + G+
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 336 SVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTM 394
I++YS L+ G C+N K +KALE++++M+ ++K + +I +C ++
Sbjct: 467 PPDIMTYSILLDGLCNNGK-LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 395 EVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMC 454
++ + G+ PN +TY+ ++ K ++ LL + KEDG +PN + +I
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Query: 455 SRRYEKA 461
R +KA
Sbjct: 586 LRDGDKA 592
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 184/439 (41%), Gaps = 46/439 (10%)
Query: 32 YNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCK-SQKAIKEAF--RFF 84
+N+L+ + + I L E M+R ++ Y+ C+ SQ ++ A +
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 85 KLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVD 144
KL P++ T + L++ K A ++ + E G + D +TTLI K
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 145 AMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALI 204
+ MV G +PN+ TYG +++G K G A M + ++ D V+FN +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 205 TACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYN 264
+ + VD A ++ EM E + P+ +T
Sbjct: 268 DSLCKYRHVDDALNLFKEM--ETKGIRPNVVT---------------------------- 297
Query: 265 IKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAF 324
Y+ I+C G W A + DM +K + P+ V +ALID GK A
Sbjct: 298 -------YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 325 EILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITAL 384
++ + + I I +Y+SL+ KA +++E M S P V T N LI
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 385 CDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNL 444
C ++ E+ +M GL +T+TY+ L+ D + + Q DGV P++
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 445 VMFKCII-GMCSR-RYEKA 461
+ + ++ G+C+ + EKA
Sbjct: 471 MTYSILLDGLCNNGKLEKA 489
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 176/375 (46%), Gaps = 9/375 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN--- 89
N L ++G ++LL ME + +++ ++CK + + +A FK +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK-YRHVDDALNLFKEMETKGI 291
Query: 90 -PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P + T++ L+S S A Q+L + E + + + LI K GK +
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
++ +M+ I+P++ TY +L++G ++ KA + M SK+ PD V +N LI
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+S V+ ++ EM+ + D +T L++ + G D A++V+K + +
Sbjct: 412 KSKRVEDGTELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y+I ++ G E A V+D M K + D + +I+ AGKV+ +++
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA-LCDG 387
+G+ +++Y++++ + + Q+A L + MK P T N LI A L DG
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Query: 388 DQLPKTMEVLSDMKS 402
D+ + E++ +M+S
Sbjct: 590 DK-AASAELIREMRS 603
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 3 DGGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIR----QGRISECIDLLEDMERKGLLD 58
D K M +F + D + +YN LI+ R+ + +L +M +GL+
Sbjct: 382 DKAKQMFEFMV--------SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 59 MDKVYHARFFNVCKSQKAIKEAFRFFKL-----VPNPTLSTFNMLMSVCASSKDSEGAFQ 113
D V + A + FK VP P + T+++L+ ++ E A +
Sbjct: 434 -DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP-PDIMTYSILLDGLCNNGKLEKALE 491
Query: 114 VLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCA 173
V +Q++ +K D +YTT+I K+GKVD +++F + G++PNV TY +I G
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 174 KAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNA 225
+ +A+ M+ P+ +N LI A + G + +++ EM +
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 118/283 (41%), Gaps = 37/283 (13%)
Query: 266 KGTPEVYTIAINCC----------SQTGDW-------------EFACSVYDDMTKKGVIP 302
KG P + +I+ C S +GD+ + A ++ M K +P
Sbjct: 24 KGNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLP 83
Query: 303 DEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELY 362
V + L+ K + + ++ + I G+ +Y+ L+ AL L
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 363 EHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERK 422
M + +P++ T+++L+ C G ++ + ++ M +G P+TIT++ L+
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 423 DDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSR-----------RYEKARTLNEHVLS 470
+ + L+ + + G PNLV + ++ G+C R + E A+ + V+
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK-IEADVVI 262
Query: 471 FNSGRPQI-ENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCL 512
FN+ + + + AL +++E G P V S ++ CL
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 205/427 (48%), Gaps = 9/427 (2%)
Query: 40 RISECIDLLEDMERKGL----LDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTF 95
RIS+ + L++ M G + + H F + K+ +A+ R + P L T+
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTY 153
Query: 96 NMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVN 155
++++ D + AF +L ++ A ++AD ++ T+I + K VD +F EM
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 156 AGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDR 215
GI PNV TY +LI G+ + A M K + P+ V FNALI A + G
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 216 AFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIA 275
A + +M +DPD T +L+ ++D+A+++++ + + + Y
Sbjct: 274 AEKLHDDMIKR--SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 276 INCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGI 335
I ++ E ++ +M+ +G++ D V + LI H G + A ++ ++ + G+
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 336 SVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTM 394
I++YS L+ G C+N K +KALE++++M+ ++K + +I +C ++
Sbjct: 392 PPDIMTYSILLDGLCNNGK-LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 395 EVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMC 454
++ + G+ PN +TY+ ++ K ++ LL + KEDG +P+ + +I
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 455 SRRYEKA 461
R +KA
Sbjct: 511 LRDGDKA 517
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 187/442 (42%), Gaps = 46/442 (10%)
Query: 29 LHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCK-SQKAIKEAF-- 81
+ +N+L+ + + I L E M+R G+ Y+ C+ SQ ++ A
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 82 RFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG 141
+ KL P++ T + L++ K A ++ + E G + D +TTLI
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 142 KVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFN 201
K + MV G +PN+ TYG +++G K G + AF M + ++ D V+FN
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 202 ALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIH 261
+I + + VD A ++ EM E + P+ +T
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEM--ETKGIRPNVVT------------------------- 222
Query: 262 KYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVE 321
Y+ I+C G W A + DM +K + P+ V +ALID GK
Sbjct: 223 ----------YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 322 AAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALI 381
A ++ + + I I +Y+SL+ KA +++E M S P + T N LI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 382 TALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVI 441
C ++ E+ +M GL +T+TY+ L+ D + + Q DGV
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 442 PNLVMFKCII-GMCSR-RYEKA 461
P+++ + ++ G+C+ + EKA
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKA 414
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 9/375 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN--- 89
N L ++G I +LL ME + +++ ++CK + + +A FK +
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK-YRHVDDALNLFKEMETKGI 216
Query: 90 -PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P + T++ L+S S A Q+L + E + + + LI K GK +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
+ +M+ I+P++ TY +LI+G ++ KA + M SK+ PD +N LI
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+S V+ ++ EM+ + D +T L++ + G D A++V+K + +
Sbjct: 337 KSKRVEDGTELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y+I ++ G E A V+D M K + D + +I+ AGKV+ +++
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA-LCDG 387
+G+ +++Y++++ + + Q+A L + MK P T N LI A L DG
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Query: 388 DQLPKTMEVLSDMKS 402
D+ + E++ +M+S
Sbjct: 515 DK-AASAELIREMRS 528
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 160/377 (42%), Gaps = 21/377 (5%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVP---N 89
+ L + + + ++L ++ME KG+ Y + +C + + ++ N
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLK----ADCKLYTTLITTCAKSGKVDA 145
P L TFN L+ EG F + + +K D Y +LI ++D
Sbjct: 253 PNLVTFNALIDAFVK----EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 146 MFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALIT 205
++F MV+ P++ TY LI G K+ +V + M + + D V + LI
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 206 ACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNI 265
G D A V +M ++ P PD +T L+ N G++++A EV+ + K I
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVP--PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 266 KGTPEVYTIAINCCSQTGD----WEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVE 321
K +YT I + G W+ CS ++ KGV P+ V + +I ++
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCS----LSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 322 AAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALI 381
A+ +L++ K G +Y++L+ A + + EL M+S + ST+ +
Sbjct: 483 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 542
Query: 382 TALCDGDQLPKTMEVLS 398
L DG +++LS
Sbjct: 543 NMLHDGRLDKSFLDMLS 559
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 3 DGGKNMLQFPYPNGKHANYAHDVSEQLHSYNRLIR----QGRISECIDLLEDMERKGLLD 58
D K M +F + D L +YN LI+ R+ + +L +M +GL+
Sbjct: 307 DKAKQMFEFMV--------SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 59 MDKVYHARFFNVCKSQKAIKEAFRFFKL-----VPNPTLSTFNMLMSVCASSKDSEGAFQ 113
D V + A + FK VP P + T+++L+ ++ E A +
Sbjct: 359 -DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP-PDIMTYSILLDGLCNNGKLEKALE 416
Query: 114 VLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCA 173
V +Q++ +K D +YTT+I K+GKVD +++F + G++PNV TY +I G
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 174 KAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNA 225
+ +A+ M+ PD +N LI A + G + +++ EM +
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 108/253 (42%), Gaps = 11/253 (4%)
Query: 232 PDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSV 291
P L+ A A + D + + + + I Y I INC + A ++
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 292 YDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSN 351
M K G P V LS+L++ H ++ A ++ + G I++++L+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 352 AKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTIT 411
+A+ L + M +P + T ++ LC + +L+ M++ + + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 412 YSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIG-MCSR-RYEKA-------- 461
++ ++ + + V+ L L + + G+ PN+V + +I +CS R+ A
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 462 -RTLNEHVLSFNS 473
+ +N ++++FN+
Sbjct: 248 EKKINPNLVTFNA 260
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 101/231 (43%), Gaps = 14/231 (6%)
Query: 295 MTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKN 354
M K +P + L+ K + + ++ + GIS + +Y+ L+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 355 WQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSI 414
AL L M + +P++ T+++L+ C G ++ + ++ M +G P+TIT++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 415 LLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSR-----------RYEKAR 462
L+ + + L+ + + G PNLV + ++ G+C R + E A+
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 463 TLNEHVLSFNSGRPQI-ENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCL 512
+ V+ FN+ + + + AL +++E G P V S ++ CL
Sbjct: 181 -IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 201/412 (48%), Gaps = 15/412 (3%)
Query: 40 RISECIDLLEDMERKGL----LDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTF 95
RISE + L++ M G + + + H F + K+ +A+ R P L T+
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTY 224
Query: 96 NMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVN 155
++++ D++ AF +L +++ L+ +Y T+I K +D +F EM
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 156 AGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDR 215
GI PNV TY +LI G+ + A M + + PD F+ALI A + G +
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 216 AFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYK-MIHKYNIKGTPEV--Y 272
A + EM +DP +T +L+ ++D A+++++ M+ K+ P+V Y
Sbjct: 345 AEKLYDEMVK--RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF---PDVVTY 399
Query: 273 TIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKN 332
I + E V+ +M+++G++ + V + LI AG + A EI +E +
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 333 QGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLP 391
G+ I++Y++L+ G C N K +KA+ ++E+++ K++PT+ T N +I +C ++
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 392 KTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPN 443
++ ++ G+ P+ + Y+ ++ RK E L + KEDG +PN
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 173/377 (45%), Gaps = 4/377 (1%)
Query: 94 TFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEM 153
T+++L++ A VL + + G + + ++L+ S ++ + +M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 154 VNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAV 213
G +PN T+ LI G + ++A M +K +PD V + ++ + G
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 214 DRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYT 273
D AF++L +M E ++P + ++ +D A ++K + I+ Y+
Sbjct: 238 DLAFNLLNKM--EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 274 IAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQ 333
I+C G W A + DM ++ + PD SALID GK+ A ++ E +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 334 GISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKT 393
I I++YSSL+ +A +++E M S P V T N LI C ++ +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 394 MEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-G 452
MEV +M GL NT+TY+IL+ + D ++ + + DGV PN++ + ++ G
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 453 MCSR-RYEKARTLNEHV 468
+C + EKA + E++
Sbjct: 476 LCKNGKLEKAMVVFEYL 492
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 179/388 (46%), Gaps = 9/388 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN--- 89
N L ++G +LL ME+ L +Y+ +CK K + +A FK +
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK-YKHMDDALNLFKEMETKGI 287
Query: 90 -PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P + T++ L+S + A ++L + E + D ++ LI K GK+ +
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
++ EMV I+P++ TY +LI+G ++ +A + M SK+ PD V +N LI
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+ V+ +V EM+ + + +T L++ AG D A+E++K + +
Sbjct: 408 KYKRVEEGMEVFREMSQ--RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y ++ + G E A V++ + + + P + +I+ AGKVE +++
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA-LCDG 387
+G+ +++Y++++ + ++A L++ MK P N LI A L DG
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Query: 388 DQLPKTMEVLSDMKSLGLCPNTITYSIL 415
D+ + E++ +M+S G + T ++
Sbjct: 586 DR-EASAELIKEMRSCGFAGDASTIGLV 612
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 112/259 (43%), Gaps = 5/259 (1%)
Query: 213 VDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVY 272
+D A + EM + P P I L+ A A + D + + + I Y
Sbjct: 62 LDDAVALFGEM-VKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 273 TIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKN 332
+I INC + A +V M K G P+ V LS+L++ H+ ++ A ++ +
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 333 QGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPK 392
G +++++L+ +A+ L + M + +P + T ++ LC
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 393 TMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIG 452
+L+ M+ L P + Y+ ++ + ++ L L + + G+ PN+V + +I
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 453 -MCS--RRYEKARTLNEHV 468
+C+ R + +R L++ +
Sbjct: 300 CLCNYGRWSDASRLLSDMI 318
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 14/238 (5%)
Query: 288 ACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMG 347
A +++ +M K P + S L+ K + + ++ +N GI +YS L+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 348 ACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCP 407
AL + M + +P + T+++L+ C ++ + + ++ M G P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 408 NTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSR---------- 456
NT+T++ L+ + + L+ + G P+LV + ++ G+C R
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 457 -RYEKARTLNEHVLSFNSGRPQI-ENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCL 512
+ E+ + L VL +N+ + + K AL +++E G P V S ++ CL
Sbjct: 245 NKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 207/443 (46%), Gaps = 16/443 (3%)
Query: 31 SYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLV--- 87
SY+RL I + + ++ + G + Y+A +S++ I A FK +
Sbjct: 143 SYSRL---SLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 88 -PNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAM 146
+P + T+N+L+ + + + A + ++ G + Y TLI K K+D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 147 FEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITA 206
F++ M G+EPN+ +Y +I+G + G++ + M + D V +N LI
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 207 CGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIK 266
+ G +A + AEM H + P IT +L+ + AG ++RA E + +
Sbjct: 320 YCKEGNFHQALVMHAEMLR--HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 267 GTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGH--AGKVEAAF 324
YT ++ SQ G A V +M G P V +ALI+ GH GK+E A
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN--GHCVTGKMEDAI 435
Query: 325 EILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITAL 384
+L++ K +G+S ++SYS+++ + + +AL + M +KP T ++LI
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 385 CDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNL 444
C+ + + ++ +M +GL P+ TY+ L+ A + D+E L L ++ E GV+P++
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 445 VMFKCIIGMC---SRRYEKARTL 464
V + +I SR E R L
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLL 578
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 193/440 (43%), Gaps = 48/440 (10%)
Query: 25 VSEQLHSYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEA 80
VS + +YN LIR G I + L + ME KG L Y+ CK +K I +
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK-IDDG 259
Query: 81 FRFFKLVP----NPTLSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLIT 135
F+ + + P L ++N++++ +C + E +F VL + G D Y TLI
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF-VLTEMNRRGYSLDEVTYNTLIK 318
Query: 136 TCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKP 195
K G + EM+ G+ P+V TY +LI KAG + +A MR + + P
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 196 DRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRARE 255
+ + L+ Q G ++ A+ VL EMN + P +T AL
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMND--NGFSPSVVTYNAL--------------- 421
Query: 256 VYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAG 315
IN TG E A +V +DM +KG+ PD V S ++
Sbjct: 422 --------------------INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 316 HAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVS 375
+ V+ A + +E +GI I+YSSL+ + ++A +LYE M + L P
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 376 TMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQA 435
T ALI A C L K +++ ++M G+ P+ +TYS+L+ ++ LL +
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 436 KEDGVIPNLVMFKCIIGMCS 455
+ +P+ V + +I CS
Sbjct: 582 FYEESVPSDVTYHTLIENCS 601
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 185/412 (44%), Gaps = 22/412 (5%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKV-YHARFFNVCKS---QKAIKEAFRFFKLVP 88
N L R+GR+ E +L +M R+G +D+V Y+ CK +A+ +
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGY-SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P++ T+ L+ + + A + L ++ GL + + YTTL+ ++ G ++ +
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
V EM + G P+V TY ALI+G G++ A M+ K + PD V ++ +++
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+S VD A V EM + + PD IT +L++ + A ++Y+ + + +
Sbjct: 462 RSYDVDEALRVKREMVEK--GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
YT IN GD E A ++++M +KGV+PD V S LI+ + A +L
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 329 EAKNQGISVGIISYSSLMGACSNAK---------------NWQKALELYEHMKSIKLKPT 373
+ + ++Y +L+ CSN + +A +++E M KP
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 374 VSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDV 425
+ N +I C + K + +M G +T+T L+ A ++ V
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 194/468 (41%), Gaps = 62/468 (13%)
Query: 101 VCASSKDSEGAFQVLRLVQEAG--LKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGI 158
V A + D E A V + +QE + ++ ++ + ++ +D + H G
Sbjct: 106 VAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF 165
Query: 159 EPNVHTYGALIDGCAKAGQ-VAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAF 217
P V +Y A++D ++ + ++ A + M V P+ +N LI +G +D A
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 218 DVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKG-TPEV--YTI 274
+ +M E P+ +T L+ ++D +K++ +KG P + Y +
Sbjct: 226 TLFDKM--ETKGCLPNVVTYNTLIDGYCKLRKIDDG---FKLLRSMALKGLEPNLISYNV 280
Query: 275 AINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQG 334
IN + G + V +M ++G DEV + LI G A + E G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 335 ISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKL------------------------ 370
++ +I+Y+SL+ + A N +A+E + M+ L
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 371 -----------KPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVAC 419
P+V T NALI C ++ + VL DMK GL P+ ++YS +L
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 420 ERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMC-SRRYEKARTLNEHVLSFNSGRPQ 477
R DV+ L + + E G+ P+ + + +I G C RR ++A L E +L G P
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV--GLPP 518
Query: 478 IENKWTSL------------ALMVYREAIVAGTIPTVEVVSKVLGCLQ 513
E +T+L AL ++ E + G +P V S ++ L
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 139/332 (41%), Gaps = 25/332 (7%)
Query: 259 MIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDM--TKKGVIPDEVFLSALIDFAGH 316
++ K+ + T ++ +A + ++T D E+A V+ + T ++
Sbjct: 89 ILTKFKLYKTAQI--LAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSR 146
Query: 317 AGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAK-NWQKALELYEHMKSIKLKPTVS 375
++ A I+ A+ G G++SY++++ A +K N A +++ M ++ P V
Sbjct: 147 LSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVF 206
Query: 376 TMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQA 435
T N LI C + + + M++ G PN +TY+ L+ + ++ G LL
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 436 KEDGVIPNLVMFKCII-GMC--SRRYEKARTLNEHVLSFNSGRPQIENKWTSL------- 485
G+ PNL+ + +I G+C R E + L E G E + +L
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN---RRGYSLDEVTYNTLIKGYCKE 323
Query: 486 -----ALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNL 540
AL+++ E + G P+V + ++ + N + ++ + V
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 541 CSLIDGFGE--YDPRAFSLLEEAASFGIVPCV 570
+L+DGF + Y A+ +L E G P V
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV 415
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 127/336 (37%), Gaps = 67/336 (19%)
Query: 31 SYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKL 86
+YN LI G++ + I +LEDM+ KGL Y C+S + EA R +
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD-VDEALRVKRE 475
Query: 87 VP----NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGK 142
+ P T++ L+ + ++ A + + GL D YT LI G
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKA--------------------------- 175
++ ++ +EMV G+ P+V TY LI+G K
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 176 -----------------------GQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGA 212
G + +A + M KN KPD +N +I ++G
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 213 VDRAFDVLAEMNAE---VHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTP 269
+ +A+ + EM +H V T+ AL+KA G+V+ V + +
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTV-----TVIALVKALHKEGKVNELNSVIVHVLRSCELSEA 710
Query: 270 EVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEV 305
E + + + G+ + V +M K G +P+ +
Sbjct: 711 EQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGI 746
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 218/472 (46%), Gaps = 19/472 (4%)
Query: 95 FNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMV 154
F++L+ C + + A + L++E G + ++T ++ +++ + + +M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 155 NAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVD 214
I+ NV+T+ +I+ K G++ KA G GIM +KP V +N L+ G ++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 215 RAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTI 274
A +++EM ++ PD T ++ N G RA EV + + + + Y I
Sbjct: 278 GARLIISEMKSK--GFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNI 332
Query: 275 AINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQG 334
I CS GD E A + D+M K+G++P + LI K+EAA +++E + +G
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 335 ISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTM 394
I + ++Y+ L+ + +KA L++ M + ++PT T +LI LC ++ +
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 395 EVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GM 453
E+ + G+ P+ + + L+ +++ LL + + P+ V + C++ G+
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 454 CSR-RYEKARTL----------NEHVLSFNSGRPQIENKW-TSLALMVYREAIVAGTIPT 501
C ++E+AR L +H+ S+N+ K T A MV E + G PT
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHI-SYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPT 571
Query: 502 VEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYDPR 553
+ + +L L ++ E L+ + S+ CS+I+ D +
Sbjct: 572 LLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAK 623
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 184/427 (43%), Gaps = 12/427 (2%)
Query: 30 HSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVP- 88
H L R RI DM R + ++ +CK K +K+A F ++
Sbjct: 195 HILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK-LKKAKGFLGIMEV 253
Query: 89 ---NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDA 145
PT+ T+N L+ + EGA ++ ++ G + D + Y +++ G+
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS- 312
Query: 146 MFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALIT 205
EV EM G+ P+ +Y LI GC+ G + AF M + + P +N LI
Sbjct: 313 --EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 206 ACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNI 265
++ A ++ E+ + + D +T L+ G +A ++ + I
Sbjct: 371 GLFMENKIEAAEILIREIREK--GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 266 KGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFE 325
+ T YT I + A +++ + KG+ PD V ++ L+D G ++ AF
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS 488
Query: 326 ILQEAKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITAL 384
+L+E I+ ++Y+ LM G C K +++A EL MK +KP + N LI+
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGK-FEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 385 CDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNL 444
V +M SLG P +TY+ LL + + E+ LL + K +G++PN
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPND 607
Query: 445 VMFKCII 451
F +I
Sbjct: 608 SSFCSVI 614
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 155/335 (46%), Gaps = 7/335 (2%)
Query: 90 PTLSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P + T+N ++S +C + SE VLR ++E GL D Y LI C+ +G ++ F
Sbjct: 293 PDMQTYNPILSWMCNEGRASE----VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
EMV G+ P +TY LI G ++ A +R K + D V +N LI
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
Q G +AF + EM + + P T +L+ + A E+++ + +K
Sbjct: 409 QHGDAKKAFALHDEMMTD--GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
+ ++ G+ + A S+ +M + PD+V + L+ GK E A E++
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
E K +GI ISY++L+ S + + A + + M S+ PT+ T NAL+ L
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKD 423
+ E+L +MKS G+ PN ++ ++ A D
Sbjct: 587 EGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 165/366 (45%), Gaps = 5/366 (1%)
Query: 94 TFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEM 153
TFN++++V + A L +++ G+K Y TL+ + G+++ + EM
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 154 VNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAV 213
+ G +P++ TY ++ G+ ++ M+ + PD V +N LI C +G +
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLRE---MKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 214 DRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYT 273
+ AF EM + + P T L+ +++ A + + I + I Y
Sbjct: 344 EMAFAYRDEMVKQ--GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401
Query: 274 IAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQ 333
I IN Q GD + A +++D+M G+ P + ++LI K A E+ ++ +
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 334 GISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKT 393
G+ ++ ++LM N +A L + M + + P T N L+ LC + +
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 394 MEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGM 453
E++ +MK G+ P+ I+Y+ L+ +K D + M+ + G P L+ + ++
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKG 581
Query: 454 CSRRYE 459
S+ E
Sbjct: 582 LSKNQE 587
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 164/395 (41%), Gaps = 33/395 (8%)
Query: 194 KPDRVVFNALITACGQSGAVDRAFD--VLAEMNAEVHPVDPDHITIGALMKACANAGQVD 251
KP + ++T+ + ++ FD VLA E I L++ C VD
Sbjct: 119 KPVTQLLKEVVTS--RKNSIRNLFDELVLAHDRLETKST----ILFDLLVRCCCQLRMVD 172
Query: 252 RAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALI 311
A E + ++ + E + S+ E A Y DM + + + + +I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 312 DFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLK 371
+ GK++ A L + GI I++Y++L+ S + A + MKS +
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 372 PTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLML 431
P + T N +++ +C+ + EVL +MK +GL P++++Y+IL+ C D+E+
Sbjct: 293 PDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 432 LSQAKEDGVIPNLVMFKCIIG--MCSRRYEKA----RTLNEHVLSFNSGRPQI------E 479
+ + G++P + +I + E A R + E + +S I +
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 480 NKWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENL---GVSADALK 536
+ A ++ E + G PT + ++ L + L E + G+ D +
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 537 RSNLCSLIDG---FGEYDPRAFSLLEEAASFGIVP 568
+ +L+DG G D RAFSLL+E I P
Sbjct: 470 ---MNTLMDGHCAIGNMD-RAFSLLKEMDMMSINP 500
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 178/375 (47%), Gaps = 8/375 (2%)
Query: 73 SQKAIKEAF--RFFKLVPNPTLSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKL 129
SQ ++ +F + KL P++ TF L++ C + + + ++V G K + +
Sbjct: 130 SQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG-MGYKPNVVI 188
Query: 130 YTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMR 189
Y T+I KS +VD ++ + M GI P+V TY +LI G +G+ + A M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 190 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQ 249
+ + PD FNALI AC + G V A + EM +DPD +T L+ +
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR--SLDPDIVTYSLLIYGLCMYSR 306
Query: 250 VDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSA 309
+D A E++ + Y+I IN ++ E ++ +M+++GV+ + V +
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 310 LIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSI 368
LI AGK+ A EI + G+ II+Y+ L+ G C N K +KAL + M+
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK-IEKALVILADMQKN 425
Query: 369 KLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVG 428
+ + T N +I +C ++ ++ + GL P+ TY+ +++ +K
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 429 LMLLSQAKEDGVIPN 443
L + KEDG++PN
Sbjct: 486 DALFRKMKEDGILPN 500
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 159/357 (44%), Gaps = 2/357 (0%)
Query: 91 TLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVF 150
L T N+L++ A L + + G + + +L+ + +V +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 151 HEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQS 210
+MV G +PNV Y +IDG K+ QV A M + PD V +N+LI+ S
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 211 GAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPE 270
G A +++ M + PD T AL+ AC G+V A E Y+ + + ++
Sbjct: 235 GRWSDATRMVSCMTKR--EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 271 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330
Y++ I + A ++ M KG PD V S LI+ + KVE ++ E
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 331 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQL 390
+G+ ++Y+ L+ A A E++ M + P + T N L+ LCD ++
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 391 PKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMF 447
K + +L+DM+ G+ + +TY+I++ + +V + G++P++ +
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 176/378 (46%), Gaps = 10/378 (2%)
Query: 83 FFKLV---PNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAK 139
FF +V P P+++ F+ L+S + K + + +Q G+ + L+ +
Sbjct: 69 FFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCR 128
Query: 140 SGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVV 199
++ +M+ G EP++ T+G+L++G + +V A + M KP+ V+
Sbjct: 129 CSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVI 188
Query: 200 FNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKM 259
+N +I +S VD A D+L M E + PD +T +L+ ++G+ A +
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRM--EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 260 IHKYNIKGTPEVYTI--AINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHA 317
+ K I P+V+T I+ C + G A Y++M ++ + PD V S LI
Sbjct: 247 MTKREI--YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 318 GKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTM 377
+++ A E+ ++G +++YS L+ +K + ++L+ M + T
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 378 NALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKE 437
LI C +L E+ M G+ PN ITY++LL +E L++L+ ++
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 438 DGVIPNLVMFKCII-GMC 454
+G+ ++V + II GMC
Sbjct: 425 NGMDADIVTYNIIIRGMC 442
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 142/339 (41%), Gaps = 34/339 (10%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLST 94
L + ++ +DLL ME+ G+ P + T
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGI--------------------------------GPDVVT 223
Query: 95 FNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMV 154
+N L+S SS A +++ + + + D + LI C K G+V E + EM+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 155 NAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVD 214
++P++ TY LI G ++ +A +G M SK PD V ++ LI +S V+
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 215 RAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTI 274
+ EM+ V + +T L++ AG+++ A E+++ + + Y +
Sbjct: 344 HGMKLFCEMSQ--RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 275 AINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQG 334
++ G E A + DM K G+ D V + +I AG+V A++I QG
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 335 ISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPT 373
+ I +Y+++M ++A L+ MK + P
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 139/326 (42%), Gaps = 3/326 (0%)
Query: 130 YTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMR 189
Y ++ + K+D ++F MV P++ + L+ +K + + M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 190 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQ 249
+ + N L+ + + A L +M H +P +T G+L+ +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH--EPSIVTFGSLLNGFCRGDR 166
Query: 250 VDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSA 309
V A ++ + K +Y I+ ++ + A + + M K G+ PD V ++
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 310 LIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIK 369
LI +G+ A ++ + I + ++++L+ AC +A E YE M
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 370 LKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGL 429
L P + T + LI LC +L + E+ M S G P+ +TYSIL+ + VE G+
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 430 MLLSQAKEDGVIPNLVMFKCII-GMC 454
L + + GV+ N V + +I G C
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYC 372
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 13/286 (4%)
Query: 31 SYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFF-- 84
+YN LI GR S+ ++ M ++ + ++A + C + + EA F+
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA-LIDACVKEGRVSEAEEFYEE 281
Query: 85 --KLVPNPTLSTFNMLM-SVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG 141
+ +P + T+++L+ +C S+ E A ++ + G D Y+ LI KS
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDE-AEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 142 KVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFN 201
KV+ ++F EM G+ N TY LI G +AG++ A + M V P+ + +N
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 202 ALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIH 261
L+ +G +++A +LA+M + + +D D +T +++ AG+V A ++Y ++
Sbjct: 401 VLLHGLCDNGKIEKALVILADM--QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 262 KYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFL 307
+ YT + + G A +++ M + G++P+E ++
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 167/340 (49%), Gaps = 3/340 (0%)
Query: 117 LVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAG 176
L + K +LY +I + +S ++ F+EMV+ G P + + L+ +
Sbjct: 84 LTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSS 143
Query: 177 QVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHIT 236
+ + + +SK V D F LI C ++G ++++FD+L E+ P+ +
Sbjct: 144 SFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTE--FGFSPNVVI 200
Query: 237 IGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMT 296
L+ C G++++A++++ + K + YT+ IN + G + +Y+ M
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 297 KKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQ 356
+ GV P+ + +++ G+ + AF++ E + +G+S I++Y++L+G
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 357 KALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILL 416
+A ++ + MKS + P + T N LI C +L K + + D+KS GL P+ +TY+IL+
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 417 VACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSR 456
RK D ++ + +E G+ P+ V + +I +R
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 165/368 (44%), Gaps = 3/368 (0%)
Query: 94 TFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEM 153
+F +L+ C + + E +F +L + E G + +YTTLI C K G+++ ++F EM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 154 VNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAV 213
G+ N TY LI+G K G + F Y M+ V P+ +N ++ + G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 214 DRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYT 273
AF V EM V + +T L+ +++ A +V + I Y
Sbjct: 285 KDAFQVFDEMRE--RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYN 342
Query: 274 IAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQ 333
I+ G A S+ D+ +G+ P V + L+ G A ++++E + +
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 334 GISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKT 393
GI ++Y+ L+ + + N +KA++L M+ + L P V T + LI C Q+ +
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 394 MEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIG- 452
+ M PN + Y+ +++ ++ L LL + +E + PN+ ++ +I
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 453 MCSRRYEK 460
+C R K
Sbjct: 523 LCKERKSK 530
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 185/398 (46%), Gaps = 21/398 (5%)
Query: 64 HARFF------NVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRL 117
H++FF + + K FR ++++ N + + ++ +S+ ++
Sbjct: 71 HSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNE----------- 119
Query: 118 VQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQ 177
+ + G + L+T S + + F+E + + +V+++G LI GC +AG+
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN-KSKVVLDVYSFGILIKGCCEAGE 178
Query: 178 VAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITI 237
+ K+F + P+ V++ LI C + G +++A D+ EM + + T
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK--LGLVANERTY 236
Query: 238 GALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTK 297
L+ G + E+Y+ + + + Y +N + G + A V+D+M +
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 298 KGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQK 357
+GV + V + LI K+ A +++ + K+ GI+ +I+Y++L+ K
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 358 ALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLV 417
AL L +KS L P++ T N L++ C +++ +M+ G+ P+ +TY+IL+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 418 ACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMC 454
R D++E + L +E G++P++ + +I G C
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 163/376 (43%), Gaps = 7/376 (1%)
Query: 83 FFKLVPN---PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAK 139
F ++V N P + FN L++ S + ++ + D + LI C +
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN-ENKSKVVLDVYSFGILIKGCCE 175
Query: 140 SGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVV 199
+G+++ F++ E+ G PNV Y LIDGC K G++ KA + M + +
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 200 FNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKM 259
+ LI ++G + F++ +M + V P+ T +M G+ A +V+
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQED--GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 260 IHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGK 319
+ + + Y I + A V D M G+ P+ + + LID GK
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 320 VEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNA 379
+ A + ++ K++G+S +++Y+ L+ + A ++ + M+ +KP+ T
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 380 LITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDG 439
LI D + K +++ M+ LGL P+ TYS+L+ K + L E
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 440 VIPNLVMFKC-IIGMC 454
PN V++ I+G C
Sbjct: 474 CEPNEVIYNTMILGYC 489
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 165/363 (45%), Gaps = 4/363 (1%)
Query: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
+P + + L+ C + E A + + + GL A+ + YT LI K+G FE
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
++ +M G+ PN++TY +++ K G+ AF + MR + V + V +N LI
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+ ++ A V+ +M ++ ++P+ IT L+ G++ +A + + + + +
Sbjct: 315 REMKLNEANKVVDQMKSD--GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y I ++ + GD A + +M ++G+ P +V + LID + +E A ++
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
+ G+ + +YS L+ +A L++ M +P N +I C
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILL-VACERKDDVEVGLMLLSQAKEDGVIPNLVMF 447
+ +++L +M+ L PN +Y ++ V C+ + E L+ + + G+ P+ +
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE-RLVEKMIDSGIDPSTSIL 551
Query: 448 KCI 450
I
Sbjct: 552 SLI 554
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 160/354 (45%), Gaps = 7/354 (1%)
Query: 37 RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN----PTL 92
++G I + DL +M + GL+ ++ Y N K+ F ++ + P L
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTV-LINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 93 STFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHE 152
T+N +M+ ++ AFQV ++E G+ + Y TLI + K++ +V +
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 153 MVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGA 212
M + GI PN+ TY LIDG G++ KA ++S+ + P V +N L++ + G
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 213 VDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVY 272
A ++ EM E + P +T L+ A + +++A ++ + + + Y
Sbjct: 389 TSGAAKMVKEM--EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 273 TIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKN 332
++ I+ G A ++ M +K P+EV + +I G A ++L+E +
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 333 QGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCD 386
+ ++ + SY ++ + ++A L E M + P+ S ++ + A D
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKND 560
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 10/244 (4%)
Query: 25 VSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHAR---FFNVCKSQKAI 77
VS + +YN LI R+ +++E +++ M+ G+ Y+ F V K KA+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 78 KEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTC 137
+P+L T+N+L+S D+ GA ++++ ++E G+K YT LI T
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 138 AKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDR 197
A+S ++ ++ M G+ P+VHTY LI G GQ+ +A + M KN +P+
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 198 VVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKA-CANAGQVDRAREV 256
V++N +I + G+ RA +L EM E + P+ + +++ C + R V
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEM--EEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Query: 257 YKMI 260
KMI
Sbjct: 537 EKMI 540
Score = 36.2 bits (82), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 22 AHDVSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKS---Q 74
+ +S L +YN L+ R+G S ++++ME +G+ Y +S +
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 75 KAIKEAFRFFKLVPNPTLSTFNMLM-SVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTL 133
KAI+ +L P + T+++L+ C + +E + ++ + + E + + +Y T+
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS-RLFKSMVEKNCEPNEVIYNTM 484
Query: 134 ITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKA 181
I K G ++ EM + PNV +Y +I+ K + +A
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 215/481 (44%), Gaps = 26/481 (5%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P F+ L SV E A Q ++ + + L+ AK GK D +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
F +M+ AG P V TY +ID K G V A G + M+ + + PD V +N++I G+
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTP 269
G +D EM +PD IT AL+ G++ E Y+ + +K
Sbjct: 310 VGRLDDTVCFFEEMKDMC--CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 270 EVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQE 329
Y+ ++ + G + A Y DM + G++P+E ++LID G + AF + E
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389
G+ +++Y++L+ +A+ ++A EL+ M + + P +++ NALI
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 449
+ + +E+L+++K G+ P+ + Y + + +E +++++ KE G+ N +++
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 450 IIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIPTVEVVSKVL 509
++ + L H+L E K + + V ++ + ++VSK +
Sbjct: 548 LMDAYFKSGNPTEGL--HLLD--------EMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 510 GCLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYD--PRAFSLLEEAASFGIV 567
D R+ + G+ A+A + ++IDG + + A +L E+ G+V
Sbjct: 598 ---------DYFNRISNDFGLQANA---AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 645
Query: 568 P 568
P
Sbjct: 646 P 646
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 179/424 (42%), Gaps = 47/424 (11%)
Query: 31 SYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKL 86
+YN +I + GR+ + + E+M+ Y+A CK K + F++
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK-LPIGLEFYRE 357
Query: 87 VP----NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGK 142
+ P + +++ L+ + A + ++ GL + YT+LI K G
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 202
+ F + +EM+ G+E NV TY ALIDG A ++ +A +G M + V P+ +NA
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 203 LITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHK 262
LI ++ +DRA ++L E+ + PD + G + + +++ A+ V + +
Sbjct: 478 LIHGFVKAKNMDRALELLNELKG--RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535
Query: 263 YNIKGTPEVYTIAINCCSQTG---------------DWEFA----CSVYDDMTKKGVIPD 303
IK +YT ++ ++G D E C + D + K ++
Sbjct: 536 CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSK 595
Query: 304 EV-----------------FLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLM 346
V +A+ID +VEAA + ++ +G+ +Y+SLM
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Query: 347 GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLC 406
N +AL L + M I +K + +L+ L +QL K L +M G+
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715
Query: 407 PNTI 410
P+ +
Sbjct: 716 PDEV 719
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 91 TLSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
T+ TF +L+ +C + S+ R+ + GL+A+ ++T +I K +V+A +
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
F +MV G+ P+ Y +L+DG K G V +A M +K D + + +L+
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNI 265
+ +A L EM E + PD + +++K G +D A E+ + K+ +
Sbjct: 696 CNQLQKARSFLEEMIGE--GIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 8/292 (2%)
Query: 40 RISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVP----NPTLSTF 95
R+ E +L M+ G++ Y+A K+ K + A + P L +
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA-KNMDRALELLNELKGRGIKPDLLLY 510
Query: 96 NMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVN 155
+ S + E A V+ ++E G+KA+ +YTTL+ KSG + EM
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Query: 156 AGIEPNVHTYGALIDGCAKAGQVAKAFGAYG-IMRSKNVKPDRVVFNALITACGQSGAVD 214
IE V T+ LIDG K V+KA + I ++ + +F A+I + V+
Sbjct: 571 LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 630
Query: 215 RAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTI 274
A + +M + + PD +LM G V A + + + +K YT
Sbjct: 631 AATTLFEQMVQK--GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 275 AINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEI 326
+ S + A S ++M +G+ PDEV +++ G ++ A E+
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 79/198 (39%), Gaps = 13/198 (6%)
Query: 289 CSVYDDM--TKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLM 346
C V+D + T+ +P AL G +E A + + K + S + L+
Sbjct: 175 CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLL 234
Query: 347 GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLC 406
+ ++ M +PTV T N +I +C + + +MK GL
Sbjct: 235 HRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV 294
Query: 407 PNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCI-----------IGMCS 455
P+T+TY+ ++ + ++ + + K+ P+++ + + IG+
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 456 RRYEKARTLNEHVLSFNS 473
R K L +V+S+++
Sbjct: 355 YREMKGNGLKPNVVSYST 372
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 196/419 (46%), Gaps = 13/419 (3%)
Query: 37 RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAF---RFFKLVPNPTLS 93
+ R I L E M+ G+ + + VC S + + + + KL P L
Sbjct: 95 KMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLV 154
Query: 94 TFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEM 153
TF L++ E A + + G K + YTTLI K+ ++ E+F++M
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 154 VNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAV 213
G PNV TY AL+ G + G+ A M + ++P+ + F ALI A + G +
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 214 DRA---FDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPE 270
A ++V+ +M+ V PD T G+L+ G +D AR+++ ++ +
Sbjct: 275 MEAKELYNVMIQMS-----VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 271 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330
+YT I+ ++ E ++ +M++KGV+ + + + LI G+ + A E+ +
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 331 KNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389
++ I +Y+ L+ G C N K +KAL ++E+M+ ++ + T +I +C +
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGK-VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
+ ++ + S G+ PN ITY+ ++ R+ + L + KEDG +PN ++K
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 174/371 (46%), Gaps = 9/371 (2%)
Query: 90 PTLSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P L T N++M VC SS+ + + ++++ G + D +T+L+ +++
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMK-LGFEPDLVTFTSLLNGYCHWNRIEDAIA 174
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
+F +++ G +PNV TY LI K + A + M + +P+ V +NAL+T
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+ G A +L +M ++P+ IT AL+ A G++ A+E+Y ++ + ++
Sbjct: 235 EIGRWGDAAWLLRDMMKR--RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV--Y 290
Query: 269 PEVYTIA--INCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEI 326
P+V+T IN G + A ++ M + G P+EV + LI + +VE +I
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 327 LQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCD 386
E +G+ I+Y+ L+ A E++ M S + P + T N L+ LC
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Query: 387 GDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVM 446
++ K + + M+ + N +TY+I++ + VE L G+ PN++
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470
Query: 447 FKCII-GMCSR 456
+ +I G C R
Sbjct: 471 YTTMISGFCRR 481
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 134/312 (42%), Gaps = 4/312 (1%)
Query: 144 DAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNAL 203
DA+ ++F MV++ P++ + L+ AK + + M+ + P N +
Sbjct: 66 DAL-DLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 204 ITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKY 263
+ S RA L +M +PD +T +L+ + +++ A ++ I
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKL--GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 264 NIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAA 323
K YT I C + A +++ M G P+ V +AL+ G+ A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 324 FEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA 383
+L++ + I +I++++L+ A +A ELY M + + P V T +LI
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 384 LCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPN 443
LC L + ++ M+ G PN + Y+ L+ + VE G+ + + + GV+ N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 444 LVMFKCII-GMC 454
+ + +I G C
Sbjct: 363 TITYTVLIQGYC 374
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 198/426 (46%), Gaps = 7/426 (1%)
Query: 40 RISECIDLLEDM----ERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTF 95
RISE + L++ M + + + + H F + K+ +A+ R P L T+
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH-NKASEAVALIDRMVARGCQPDLFTY 223
Query: 96 NMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVN 155
+++ D + A +L+ +++ ++AD +YTT+I V+ +F EM N
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 156 AGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDR 215
GI PNV TY +LI G+ + A M + + P+ V F+ALI A + G +
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 216 AFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIA 275
A + EM +DPD T +L+ ++D A+ +++++ + Y
Sbjct: 344 AEKLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 276 INCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGI 335
I + E ++ +M+++G++ + V + LI AG + A +I ++ + G+
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 336 SVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTME 395
II+YS L+ +KAL ++E+++ K++P + T N +I +C ++ +
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 396 VLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCS 455
+ + G+ PN I Y+ ++ RK E L + KEDG +PN + +I
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 456 RRYEKA 461
R +KA
Sbjct: 582 RDGDKA 587
Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 199/442 (45%), Gaps = 14/442 (3%)
Query: 25 VSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEA 80
+S L+SYN LI R+ ++ + +L M + G + D V + N K I EA
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHGKRISEA 169
Query: 81 F----RFFKLVPNPTLSTFNMLM-SVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLIT 135
+ F + P TFN L+ + +K SE + R+V G + D Y T++
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVN 228
Query: 136 TCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKP 195
K G +D + +M IE +V Y +ID V A + M +K ++P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 196 DRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRARE 255
+ V +N+LI G A +L++M ++P+ +T AL+ A G++ A +
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 256 VYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAG 315
+Y + K +I Y+ IN + A +++ M K P+ V + LI
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 316 HAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVS 375
A +VE E+ +E +G+ ++Y++L+ A + A ++++ M S + P +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 376 TMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQA 435
T + L+ LC +L K + V ++ + P+ TY+I++ + VE G L
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 436 KEDGVIPNLVMFKCII-GMCSR 456
GV PN++++ +I G C +
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRK 548
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 170/418 (40%), Gaps = 39/418 (9%)
Query: 88 PNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMF 147
P P++ FN L+S A + + +Q + D Y LI + ++
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 148 EVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 207
V +M+ G EP++ T +L++G ++++A M +P+ V FN LI
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 208 GQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKG 267
A ++ M A PD T G ++ G +D A + K + K I+
Sbjct: 196 FLHNKASEAVALIDRMVA--RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 268 TPEVYTIAIN-----------------------------------CCSQTGDWEFACSVY 292
+YT I+ C G W A +
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 293 DDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNA 352
DM ++ + P+ V SALID GK+ A ++ E + I I +YSSL+
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 353 KNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITY 412
+A ++E M S P V T N LI C ++ + ME+ +M GL NT+TY
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 413 SILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSR-RYEKARTLNEHV 468
+ L+ + D ++ + + DGV P+++ + ++ G+C + EKA + E++
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 172/403 (42%), Gaps = 38/403 (9%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN--- 89
N L ++G I + LL+ ME KG ++ D V + + + K + +A F + N
Sbjct: 228 NGLCKRGDIDLALSLLKKME-KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 90 -PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P + T+N L+ + A ++L + E + + ++ LI K GK+ +
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
++ EM+ I+P++ TY +LI+G ++ +A + +M SK+ P+ V +N LI
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 209 QSGAVDRAFDVLAEMNAE---------------------------------VHPVDPDHI 235
++ V+ ++ EM+ V PD I
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 236 TIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDM 295
T L+ G++++A V++ + K ++ Y I I + G E ++ +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 296 TKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNW 355
+ KGV P+ + + +I G E A + +E K G +Y++L+ A +
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 356 QKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLS 398
+ EL + M+S ST++ +I L DG +E+LS
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 179/398 (44%), Gaps = 35/398 (8%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P + T+N +++ S D+ A +LR ++E +KAD Y+T+I + + G +DA +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
F EM GI+ +V TY +L+ G KAG+ M S+ + P+ + FN L+ +
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 210 SGAVDRAFDVLAEMNAE-VHP--------------------------------VDPDHIT 236
G + A ++ EM + P PD +T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 237 IGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMT 296
+L+K +VD +V++ I K + Y+I + Q+G + A ++ +M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 297 KKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLM-GACSNAKNW 355
GV+PD + L+D GK+E A EI ++ + + +GI+ Y++++ G C K
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK-V 489
Query: 356 QKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSIL 415
+ A L+ + +KP V T +I+ LC L + +L M+ G PN TY+ L
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 416 LVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGM 453
+ A R D+ L+ + K G + K +I M
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 175/413 (42%), Gaps = 43/413 (10%)
Query: 62 VYHARFFNVCKSQKAIKEAFRFFKLVP----NPTLSTFNMLMSVCASSKDSEGAFQVLRL 117
V +RFF+ K F K + + T N++++ + A+ VL
Sbjct: 89 VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 118 VQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQ 177
V + G + D + TLI GKV + MV G +P+V TY ++++G ++G
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 178 VAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITI 237
+ A M +NVK D ++ +I + + G +D A + EM E + +T
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM--ETKGIKSSVVTY 266
Query: 238 GALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTK 297
+L++ AG+ W + DM
Sbjct: 267 NSLVRGLCKAGK-----------------------------------WNDGALLLKDMVS 291
Query: 298 KGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQK 357
+ ++P+ + + L+D GK++ A E+ +E +GIS II+Y++LM +
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 358 ALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLV 417
A + + M K P + T +LI C ++ M+V ++ GL N +TYSIL+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 418 ACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSR-RYEKARTLNEHV 468
+ +++ L + GV+P+++ + ++ G+C + EKA + E +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 169/385 (43%), Gaps = 5/385 (1%)
Query: 17 KHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKA 76
+ N DV + L R G I I L ++ME KG+ Y++ +CK+ K
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 77 IKEAFRFFKLVPN---PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTL 133
A +V P + TFN+L+ V + A ++ + + G+ + Y TL
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 134 ITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNV 193
+ ++ + MV P++ T+ +LI G +V + + + +
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 194 KPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRA 253
+ V ++ L+ QSG + A ++ EM + H V PD +T G L+ + G++++A
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVS--HGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 254 REVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDF 313
E+++ + K + +YT I + G E A +++ + KGV P+ + + +I
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 314 AGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPT 373
G + A +L++ + G + +Y++L+ A + + +L E MKS
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Query: 374 VSTMNALITALCDGDQLPKTMEVLS 398
S++ +I L G+ +++LS
Sbjct: 578 ASSIKMVIDMLLSGELDKSFLDMLS 602
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 2/238 (0%)
Query: 214 DRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYT 273
D A + EM P+ P + A A Q + + K + I
Sbjct: 70 DDAIALFQEM-IRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 274 IAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQ 333
I INC + FA SV + K G PD + LI GKV A ++
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 334 GISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKT 393
G +++Y+S++ + + AL+L M+ +K V T + +I +LC +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 394 MEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
+ + +M++ G+ + +TY+ L+ + G +LL ++PN++ F ++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 319 KVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMN 378
K + A + QE ++ +S A + K + L+ + ++ + + T+N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 379 ALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKED 438
+I C + VL + LG P+T T++ L+ + V ++L+ + E+
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 439 GVIPNLVMFKCII-GMC 454
G P++V + I+ G+C
Sbjct: 188 GCQPDVVTYNSIVNGIC 204
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/224 (18%), Positives = 88/224 (39%), Gaps = 17/224 (7%)
Query: 288 ACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMG 347
A +++ +M + +P V S + + ++ + GI+ I + + ++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 348 ACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCP 407
A + + + +P +T N LI L ++ + + ++ M G P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 408 NTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSR----------- 456
+ +TY+ ++ R D + L LL + +E V ++ + II R
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 457 RYEKARTLNEHVLSFNSGRPQI--ENKWTSLAL----MVYREAI 494
+ + + + V+++NS + KW AL MV RE +
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 136/569 (23%), Positives = 233/569 (40%), Gaps = 49/569 (8%)
Query: 47 LLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLS----TFNMLMSVC 102
L+E M+ G+ D + CK +EA + F+ + S T+N L+ V
Sbjct: 266 LVEKMKSDGIAP-DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 103 ASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNV 162
S + A +VL + G Y +LI+ A+ G +D E+ ++M G +P+V
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 163 HTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAE 222
TY L+ G +AG+V A + MR+ KP+ FNA I G G + E
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 223 MNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQT 282
+N V + PD +T L+ G V+K + + E + I+ S+
Sbjct: 445 IN--VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 283 GDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISY 342
G +E A +VY M GV PD + ++ G E + ++L E ++ ++Y
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 343 SSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKS 402
SL+ A +N K L E + S ++P + L+ D LP+ S++K
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 403 LGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSR------ 456
G P+ T + ++ R+ V +L KE G P++ + ++ M SR
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 457 -----RYEKARTLNEHVLSFNSG-RPQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLG 510
R A+ + ++S+N+ N A ++ E +G +P V + +G
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 511 CLQLPYNADIRERLVENLGVSADALK------RSNLCSLIDGFGEYDPRAFSLLEEAASF 564
Y AD E +GV +K ++ S++DG+ + + + +EA F
Sbjct: 743 S----YAAD--SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK-----DEAKLF 791
Query: 565 GIVPCVSFKEIPVVVDARKLEIHTAKGRN 593
V D R L+ H KG +
Sbjct: 792 -------------VEDLRNLDPHAPKGED 807
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 197/431 (45%), Gaps = 16/431 (3%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVP----NP 90
L ++GR+S ++ ++ G +D + + + +EA FK + P
Sbjct: 183 LGKEGRVSSAANMFNGLQEDGF-SLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKP 241
Query: 91 TLSTFNMLMSVCASSKDSEGAFQVLRLVQEA---GLKADCKLYTTLITTCAKSGKVDAMF 147
TL T+N++++V K ++ LV++ G+ D Y TLIT C +
Sbjct: 242 TLITYNVILNVFG--KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAA 299
Query: 148 EVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 207
+VF EM AG + TY AL+D K+ + +A M P V +N+LI+A
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 208 GQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKG 267
+ G +D A ++ +M + PD T L+ AG+V+ A +++ + K
Sbjct: 360 ARDGMLDEAMELKNQMAEK--GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 268 TPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEIL 327
+ I G + ++D++ G+ PD V + L+ G G +
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 328 QEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDG 387
+E K G ++++L+ A S ++++A+ +Y M + P +ST N ++ AL G
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 388 DQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLM-LLSQAKEDGVI-PNLV 445
++ +VL++M+ PN +TY LL A + E+GLM L++ GVI P V
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY--ANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 446 MFKCIIGMCSR 456
+ K ++ +CS+
Sbjct: 596 LLKTLVLVCSK 606
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 161/368 (43%), Gaps = 9/368 (2%)
Query: 93 STFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHE 152
S +++S+ A + +QE G D YT+LI+ A SG+ VF +
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 153 MVNAGIEPNVHTYGALIDGCAKAGQ-VAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
M G +P + TY +++ K G K M+S + PD +N LIT C +
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 212 AVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKG-TPE 270
A V EM A D +T AL+ G+ R +E K++++ + G +P
Sbjct: 294 LHQEAAQVFEEMKAAGFSY--DKVTYNALLDV---YGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 271 V--YTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
+ Y I+ ++ G + A + + M +KG PD + L+ AGKVE+A I +
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
E +N G I ++++ + N + + +++++ + L P + T N L+
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
+ V +MK G P T++ L+ A R E + + + + GV P+L +
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 449 CIIGMCSR 456
++ +R
Sbjct: 529 TVLAALAR 536
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 141/330 (42%), Gaps = 6/330 (1%)
Query: 132 TLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYG-IMRS 190
+LI SG++D++ E E A + G + A A+ M+
Sbjct: 105 SLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQ 164
Query: 191 KNVKP--DRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAG 248
K+ + D V +I+ G+ G V A ++ + + +D T +L+ A AN+G
Sbjct: 165 KDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT--SLISAFANSG 222
Query: 249 QVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGD-WEFACSVYDDMTKKGVIPDEVFL 307
+ A V+K + + K T Y + +N + G W S+ + M G+ PD
Sbjct: 223 RYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTY 282
Query: 308 SALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKS 367
+ LI + A ++ +E K G S ++Y++L+ + ++A+++ M
Sbjct: 283 NTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL 342
Query: 368 IKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEV 427
P++ T N+LI+A L + ME+ + M G P+ TY+ LL ER VE
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 428 GLMLLSQAKEDGVIPNLVMFKCIIGMCSRR 457
+ + + + G PN+ F I M R
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 284 DWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYS 343
DW Y M V+ + +I G G+V +A + + G S+ + SY+
Sbjct: 159 DWFMKQKDYQSMLDNSVV------AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 344 SLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCD-GDQLPKTMEVLSDMKS 402
SL+ A +N+ +++A+ +++ M+ KPT+ T N ++ G K ++ MKS
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 403 LGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII---GMCSRRYE 459
G+ P+ TY+ L+ C+R + + + K G + V + ++ G R E
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 460 KARTLNEHVLSFNSGRPQI 478
+ LNE VL N P I
Sbjct: 333 AMKVLNEMVL--NGFSPSI 349
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 36/218 (16%)
Query: 13 YPNGKHANYAHDVSEQLHSYNRLIRQGRI---------SECIDLLEDMER---------- 53
Y NGK H ++E++ Y+ +I + S+C DLL + ER
Sbjct: 569 YANGKEIGLMHSLAEEV--YSGVIEPRAVLLKTLVLVCSKC-DLLPEAERAFSELKERGF 625
Query: 54 ----KGLLDMDKVYHARFFNVCKSQKAI---KEAFRFFKLVPNPTLSTFNMLMSVCASSK 106
L M +Y R V K+ + KE R F P+++T+N LM + + S
Sbjct: 626 SPDITTLNSMVSIYGRRQM-VAKANGVLDYMKE--RGF----TPSMATYNSLMYMHSRSA 678
Query: 107 DSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYG 166
D + ++LR + G+K D Y T+I ++ ++ +F EM N+GI P+V TY
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 167 ALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALI 204
I A +A G M +P++ +N+++
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 188/410 (45%), Gaps = 4/410 (0%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLST 94
L + RI+E ++ M +G D Y +CK + + A F +P P +
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR-VDAAKDLFYRIPKPEIVI 355
Query: 95 FNMLMSVCASSKDSEGAFQVLR-LVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEM 153
FN L+ + + A VL +V G+ D Y +LI K G V EV H+M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 154 VNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAV 213
N G +PNV++Y L+DG K G++ +A+ M + +KP+ V FN LI+A + +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 214 DRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYT 273
A ++ EM + PD T +L+ ++ A + + + + Y
Sbjct: 476 PEAVEIFREMPRK--GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 274 IAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQ 333
IN + G+ + A + ++M +G DE+ ++LI AG+V+ A + ++
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 334 GISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKT 393
G + IS + L+ + ++A+E + M P + T N+LI LC ++
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 394 MEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPN 443
+ + +++ G+ P+T+T++ L+ + V +LL + EDG +PN
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 9/383 (2%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
PTL TF ++M + + + A +LR + + G + +Y TLI + +K +V+ ++
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
EM G P+ T+ +I G K ++ +A M + PD + + L+ +
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYK-MIHKYNIKGT 268
G VD A D+ + P+ + L+ G++D A+ V M+ Y I
Sbjct: 335 IGRVDAAKDLFYRIPK------PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y I + G A V DM KG P+ + L+D GK++ A+ +L
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
E G+ + ++ L+ A +A+E++ M KP V T N+LI+ LC+ D
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
++ + +L DM S G+ NT+TY+ L+ A R+ +++ L+++ G + + +
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 449 CII-GMC-SRRYEKARTLNEHVL 469
+I G+C + +KAR+L E +L
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKML 591
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 159/374 (42%), Gaps = 44/374 (11%)
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
VF++M++ I P + T+G ++ ++ A M P+ V++ LI +
Sbjct: 204 VFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLS 263
Query: 209 QSGAVDRAFDVLAEM-------NAE--------------------------VHPVDPDHI 235
+ V+ A +L EM +AE + PD I
Sbjct: 264 KCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDI 323
Query: 236 TIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDM 295
T G LM G+VD A++++ I K I ++ I+ G + A +V DM
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 296 -TKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKN 354
T G++PD ++LI G V A E+L + +N+G + SY+ L+
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 355 WQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSI 414
+A + M + LKP N LI+A C ++P+ +E+ +M G P+ T++
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 415 LLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYE--KARTL-NEHVLSF 471
L+ D+++ L LL +GV+ N V + +I RR E +AR L NE V
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF-- 557
Query: 472 NSGRPQIENKWTSL 485
G P E + SL
Sbjct: 558 -QGSPLDEITYNSL 570
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 106/254 (41%), Gaps = 7/254 (2%)
Query: 199 VFNALITACGQSGAVDRAFDVLAEMNAE-VHPVDPDHITIGALMKACANAGQVDRAREVY 257
V+ LI G +G +L +M E + + I+I GQ R +
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRL--ML 170
Query: 258 KMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHA 317
+M + Y+ + T + Y + + + A +V+ DM + + P ++
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAV 230
Query: 318 GKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTM 377
++++A +L++ G + Y +L+ + S +AL+L E M + P T
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 378 NALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKE 437
N +I LC D++ + ++++ M G P+ ITY L+ + V+ L + +
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 438 DGVIPNLVMFKCII 451
P +V+F +I
Sbjct: 351 ----PEIVIFNTLI 360
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 189/414 (45%), Gaps = 6/414 (1%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQK--AIKEAFRFFKLVPN-PT 91
L R G+I+E ++L+ M+ +G Y +C ++K KE F K + P
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 92 LSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
T+ L+ + ++D + Q +++ G D +T L+ K+G F+
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 152 EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
M + GI PN+HTY LI G + ++ A +G M S VKP + I G+SG
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 212 AVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEV 271
A + +M + + P+ + A + + A AG+ A++++ + +
Sbjct: 448 DSVSALETFEKMKTK--GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 272 YTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAK 331
Y + + C S+ G+ + A + +M + G PD + +++LI+ A +V+ A+++ K
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 332 NQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLP 391
+ +++Y++L+ Q+A+EL+E M P T N L LC D++
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 392 KTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLV 445
+++L M +G P+ TY+ ++ + V+ + Q K+ V P+ V
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFV 678
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 185/448 (41%), Gaps = 79/448 (17%)
Query: 74 QKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTL 133
++ I E FR P+L T++ LM +D + +L+ ++ GLK + +T
Sbjct: 212 RRMILEGFR-------PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTIC 264
Query: 134 ITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNV 193
I ++GK++ +E+ M + G P+V TY LID A ++ A + M++
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 194 KPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAG----- 248
KPDRV + L+ + +D +EM + H PD +T L+ A AG
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV--PDVVTFTILVDALCKAGNFGEA 382
Query: 249 ------------------------------QVDRAREVYKMIHKYNIKGTPEVYTIAINC 278
++D A E++ + +K T Y + I+
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 279 CSQTGDWEFACSVYDDMTKKGV-----------------------------------IPD 303
++GD A ++ M KG+ +PD
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 304 EVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYE 363
V + ++ G+++ A ++L E G +I +SL+ A +A +++
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 364 HMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKD 423
MK +KLKPTV T N L+ L ++ + +E+ M G PNTIT++ L + D
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 424 DVEVGLMLLSQAKEDGVIPNLVMFKCII 451
+V + L +L + + G +P++ + II
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTII 650
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 168/387 (43%), Gaps = 10/387 (2%)
Query: 82 RFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG 141
R K N L+ F L SV K + A LR ++E G + Y LI KS
Sbjct: 147 RIIKRDTNTYLTIFKSL-SVKGGLKQAPYA---LRKMREFGFVLNAYSYNGLIHLLLKSR 202
Query: 142 KVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFN 201
EV+ M+ G P++ TY +L+ G K + G M + +KP+ F
Sbjct: 203 FCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFT 262
Query: 202 ALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIH 261
I G++G ++ A+++L M+ E PD +T L+ A A ++D A+EV++ +
Sbjct: 263 ICIRVLGRAGKINEAYEILKRMDDE--GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 262 KYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVE 321
K Y ++ S D + + +M K G +PD V + L+D AG
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 322 AAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALI 381
AF+ L ++QGI + +Y++L+ ALEL+ +M+S+ +KPT T I
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 382 TALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVI 441
+E MK+ G+ PN + + L + + + K+ G++
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 442 PNLVMFKCIIGMCSRRYEKARTLNEHV 468
P+ V + M + Y K ++E +
Sbjct: 501 PDSVTYN----MMMKCYSKVGEIDEAI 523
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 154/302 (50%), Gaps = 2/302 (0%)
Query: 116 RLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKA 175
+ ++ G++ Y LI ++ ++ +VF ++ + G P+V TY L+D K+
Sbjct: 774 KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKS 833
Query: 176 GQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHI 235
G++ + F Y M + + + + N +I+ ++G VD A D+ ++ ++ P
Sbjct: 834 GKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD-RDFSPTAC 892
Query: 236 TIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDM 295
T G L+ + +G++ A+++++ + Y + +Y I IN + G+ + AC+++ M
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 296 TKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNW 355
K+GV PD S L+D G+V+ +E K G++ ++ Y+ ++ +
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRL 1012
Query: 356 QKALELYEHMKSIK-LKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSI 414
++AL L+ MK+ + + P + T N+LI L + + ++ ++++ GL PN T++
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 415 LL 416
L+
Sbjct: 1073 LI 1074
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 149/328 (45%), Gaps = 4/328 (1%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P L T+N+L+ + E A V V+ G D Y L+ KSGK+D +FE+
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAY-GIMRSKNVKPDRVVFNALITACG 208
+ EM E N T+ +I G KAG V A Y +M ++ P + LI
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+SG + A + M + P+ L+ AG+ D A ++K + K ++
Sbjct: 903 KSGRLYEAKQLFEGMLD--YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
+ Y++ ++C G + + ++ + G+ PD V + +I+ G + ++E A +
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 329 EAK-NQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDG 387
E K ++GI+ + +Y+SL+ A ++A ++Y ++ L+P V T NALI
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 388 DQLPKTMEVLSDMKSLGLCPNTITYSIL 415
+ V M + G PNT TY L
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 154/376 (40%), Gaps = 65/376 (17%)
Query: 145 AMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALI 204
+FE F + + G++P + TY LI G +A + A + ++S PD +N L+
Sbjct: 770 TLFEKFTK--DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 205 TACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYN 264
A G+SG +D F++ EM+ H + + IT ++ AG VD A ++Y
Sbjct: 828 DAYGKSGKIDELFELYKEMST--HECEANTITHNIVISGLVKAGNVDDALDLY------- 878
Query: 265 IKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAF 324
YD M+ + P LID +G++ A
Sbjct: 879 ---------------------------YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 325 EILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITAL 384
++ + + G Y+ L+ A A L++ M ++P + T + L+ L
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 385 CDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKED-GVIPN 443
C ++ + + ++K GL P+ + Y++++ + +E L+L ++ K G+ P+
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031
Query: 444 LVMFKCII---GMCSRRYEKARTLNE--------HVLSFN--------SGRPQIENKWTS 484
L + +I G+ E + NE +V +FN SG+P+
Sbjct: 1032 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE------- 1084
Query: 485 LALMVYREAIVAGTIP 500
A VY+ + G P
Sbjct: 1085 HAYAVYQTMVTGGFSP 1100
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 5/217 (2%)
Query: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
+PT T+ L+ + S A Q+ + + G + +C +Y LI K+G+ DA
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
+F MV G+ P++ TY L+D G+V + + ++ + PD V +N +I G
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+S ++ A + EM + PD T +L+ AG V+ A ++Y I + ++
Sbjct: 1008 KSHRLEEALVLFNEMKTS-RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE-- 1064
Query: 269 PEVYTI--AINCCSQTGDWEFACSVYDDMTKKGVIPD 303
P V+T I S +G E A +VY M G P+
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 205/502 (40%), Gaps = 32/502 (6%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFF-KLVPN---P 90
L + GR E + ++ GL+ D V + I EA + +++ N P
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVP-DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 91 TLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVF 150
+ N L++ + + A+++ ++E LK Y TL+ K+GK+ E+F
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 151 HEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQS 210
MV G PN T+ L D K +V A M PD +N +I ++
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 211 GAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHK--YNIKGT 268
G V A +M V+ PD +T+ L+ A ++ A YK+I YN
Sbjct: 657 GQVKEAMCFFHQMKKLVY---PDFVTLCTLLPGVVKASLIEDA---YKIITNFLYNCADQ 710
Query: 269 PE--VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPD-EVFLSALIDFAGHAGKVEAAFE 325
P + I + A S + + G+ D + L +I ++ V A
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 770
Query: 326 ILQE-AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITAL 384
+ ++ K+ G+ + +Y+ L+G A + A +++ +KS P V+T N L+ A
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 385 CDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKED-GVIPN 443
++ + E+ +M + NTIT++I++ + +V+ L L D P
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 444 LVMFKCIIGMCSR--RYEKARTLNEHVLSFNSGRPQ--IENKWTS---------LALMVY 490
+ +I S+ R +A+ L E +L + RP I N + A ++
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC-RPNCAIYNILINGFGKAGEADAACALF 949
Query: 491 REAIVAGTIPTVEVVSKVLGCL 512
+ + G P ++ S ++ CL
Sbjct: 950 KRMVKEGVRPDLKTYSVLVDCL 971
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 132/340 (38%), Gaps = 37/340 (10%)
Query: 141 GKVDAMFEVF-----------------------------------HEMVNAGIEPNVHTY 165
GK++ M VF +M G N ++Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 166 GALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNA 225
LI K+ +A Y M + +P +++L+ G+ +D +L EM
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-- 249
Query: 226 EVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDW 285
E + P+ T ++ AG+++ A E+ K + YT+ I+
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 286 EFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSL 345
+ A V++ M PD V L+D +++ + E + G +++++ L
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 346 MGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGL 405
+ A A N+ +A + + M+ + P + T N LI L +L +E+ +M+SLG+
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 406 CPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLV 445
P TY + + + D L + K G+ PN+V
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 11/210 (5%)
Query: 264 NIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPD-EVFLSALIDFAGHAGKVEA 322
N+ T E + G E V+D M K+ + D +L+ + G +A
Sbjct: 113 NLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQA 172
Query: 323 AFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALIT 382
+ L++ + G + SY+ L+ ++ +A+E+Y M +P++ T ++L+
Sbjct: 173 PYA-LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMV 231
Query: 383 ALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIP 442
L + M +L +M++LGL PN T++I + R + +L + ++G P
Sbjct: 232 GLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 291
Query: 443 NLVMFKCII-GMCSRR--------YEKART 463
++V + +I +C+ R +EK +T
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKT 321
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 32 YNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLV 87
YN LI + G L + M ++G+ K Y +C + + E +FK +
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR-VDEGLHYFKEL 987
Query: 88 P----NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEA-GLKADCKLYTTLITTCAKSGK 142
NP + +N++++ S E A + ++ + G+ D Y +LI +G
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 202
V+ ++++E+ AG+EPNV T+ ALI G + +G+ A+ Y M + P+ +
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 203 L 203
L
Sbjct: 1108 L 1108
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 92/233 (39%), Gaps = 1/233 (0%)
Query: 186 GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACA 245
G M K+ KPD + D +F + ++ V T +++A
Sbjct: 71 GSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTE-TCNYMLEALR 129
Query: 246 NAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEV 305
G+++ V+ ++ K IK Y S G + A M + G + +
Sbjct: 130 VDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAY 189
Query: 306 FLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHM 365
+ LI + A E+ + +G + +YSSLM ++ + L + M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 366 KSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVA 418
+++ LKP V T I L ++ + E+L M G P+ +TY++L+ A
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 198/433 (45%), Gaps = 11/433 (2%)
Query: 29 LHSYNRLIRQGRISECIDLLEDMERKGLLDMDK-VYHARFFNVCKSQKAIKEAFRFF--- 84
LH Y ++GR I+LL+ M+ KG+ D D Y+ ++C+S + K
Sbjct: 235 LHWY---CKKGRFKAAIELLDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290
Query: 85 KLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVD 144
K + +P T+N L++ ++ A Q+L + GL + + LI G
Sbjct: 291 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350
Query: 145 AMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALI 204
++F+ M G+ P+ +YG L+DG K + A G Y M+ V R+ + +I
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 205 TACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYN 264
++G +D A +L EM+ + +DPD +T AL+ G+ A+E+ I++
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKD--GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 265 IKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAF 324
+ +Y+ I C + G + A +Y+ M +G D + L+ AGKV A
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 325 EILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITAL 384
E ++ + GI +S+ L+ N+ KA +++ M + PT T +L+ L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 385 CDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNL 444
C G L + + L + ++ +T+ Y+ LL A + ++ + L + + ++P+
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Query: 445 VMFKCII-GMCSR 456
+ +I G+C +
Sbjct: 649 YTYTSLISGLCRK 661
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 188/420 (44%), Gaps = 7/420 (1%)
Query: 36 IRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN----PT 91
+R+G I + +++ M G +A +V KS + + + F K + P
Sbjct: 134 LREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV-SVWSFLKEMLKRKICPD 192
Query: 92 LSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
++TFN+L++V + E + +++ ++++G Y T++ K G+ A E+
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252
Query: 152 EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
M + G++ +V TY LI ++ ++AK + MR + + P+ V +N LI G
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Query: 212 AVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEV 271
V A +L EM + + P+H+T AL+ + G A +++ M+ + +
Sbjct: 313 KVLIASQLLNEMLS--FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 272 YTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAK 331
Y + ++ + +++ A Y M + GV + + +ID G ++ A +L E
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 332 NQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLP 391
GI I++YS+L+ ++ A E+ + + L P + LI C L
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 392 KTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
+ + + M G + T+++L+ + + V + DG++PN V F C+I
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 197/461 (42%), Gaps = 24/461 (5%)
Query: 16 GKHANYAHDVSEQLHS---------YNRLI----RQGRISECIDLLEDMERKGLLDMDKV 62
G H A + LH+ YN L+ + G +++ + L +M ++ +L
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 63 YHARFFNVCKSQKAI------KEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLR 116
Y + +C+ K + KEA ++PN + T + + +
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT--CFVDGMFKAGQWKAGIYFRE 708
Query: 117 LVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAG 176
+ G D +I ++ GK++ ++ EM N PN+ TY L+ G +K
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768
Query: 177 QVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHIT 236
V+ +F Y + + PD++ ++L+ +S ++ +L V+ D T
Sbjct: 769 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR--GVEVDRYT 826
Query: 237 IGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMT 296
L+ C G+++ A ++ K++ I + ++ ++ ++ + V +M+
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886
Query: 297 KKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQ 356
K+G+ P+ LI+ G ++ AF + +E I ++ S+++ A +
Sbjct: 887 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946
Query: 357 KALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILL 416
+A L M +KL PT+++ L+ C + + +E+ M + GL + ++Y++L+
Sbjct: 947 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006
Query: 417 VACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSR 456
K D+ + L + K DG + N +K +I G+ +R
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1047
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/484 (19%), Positives = 189/484 (39%), Gaps = 51/484 (10%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFF----KLVPNP 90
L + G+++E + + M G+L + S + +K AF F K+ +P
Sbjct: 518 LCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK-AFSVFDEMTKVGHHP 576
Query: 91 TLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVF 150
T T+ L+ A + L+ + D +Y TL+T KSG + +F
Sbjct: 577 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 636
Query: 151 HEMVNAGIEPNVHTYGALIDGCAKAGQ--VAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
EMV I P+ +TY +LI G + G+ +A F R NV P++V++ +
Sbjct: 637 GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG-NVLPNKVMYTCFVDGMF 695
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
++G +M+ H PD +T A++ + G++++ ++ + N
Sbjct: 696 KAGQWKAGIYFREQMDNLGHT--PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPD-----------------EVFLSALI 311
Y I ++ S+ D + +Y + G++PD E+ L L
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813
Query: 312 DFAGHA------------------GKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAK 353
F G++ AF++++ + GIS+ + +++ +
Sbjct: 814 AFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 873
Query: 354 NWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYS 413
+Q++ + M + P LI LC + V +M + +CP + S
Sbjct: 874 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES 933
Query: 414 IL---LVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLS 470
+ L C + D+ + L + + K ++P + F ++ +C + L V+
Sbjct: 934 AMVRALAKCGKADEATLLLRFMLKMK---LVPTIASFTTLMHLCCKNGNVIEALELRVVM 990
Query: 471 FNSG 474
N G
Sbjct: 991 SNCG 994
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 123/270 (45%), Gaps = 16/270 (5%)
Query: 187 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDV---LAEMNAEVHPVDPDHITIGALMKA 243
++R++ P R + L G+S V A L N V+ + L++
Sbjct: 82 LVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDI---------LIRV 132
Query: 244 CANAGQVDRAREVYKMIHKYNIKGTPEVYTI--AINCCSQTGDWEFACSVYDDMTKKGVI 301
G + + E+++++ Y P VYT + ++G+ S +M K+ +
Sbjct: 133 YLREGMIQDSLEIFRLMGLYGF--NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKIC 190
Query: 302 PDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALEL 361
PD + LI+ G E + ++Q+ + G + I++Y++++ ++ A+EL
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 362 YEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACER 421
+HMKS + V T N LI LC +++ K +L DM+ + PN +TY+ L+
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 422 KDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
+ V + LL++ G+ PN V F +I
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 123/282 (43%), Gaps = 6/282 (2%)
Query: 175 AGQVAKAFGAY-GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPD 233
+G+ + FGA R N P V++ LI + G + + ++ M ++ +P
Sbjct: 102 SGKSSFVFGALMTTYRLCNSNPS--VYDILIRVYLREGMIQDSLEIFRLMG--LYGFNPS 157
Query: 234 HITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYD 293
T A++ + +G+ K + K I + I IN G +E + +
Sbjct: 158 VYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQ 217
Query: 294 DMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAK 353
M K G P V + ++ + G+ +AA E+L K++G+ + +Y+ L+ +
Sbjct: 218 KMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSN 277
Query: 354 NWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYS 413
K L M+ + P T N LI + ++ ++L++M S GL PN +T++
Sbjct: 278 RIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFN 337
Query: 414 ILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMC 454
L+ + + + L + + G+ P+ V + ++ G+C
Sbjct: 338 ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 202/433 (46%), Gaps = 21/433 (4%)
Query: 32 YNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFK-- 85
YN LI G +++ I++ + M KGL Y+ CK+ +A A R K
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQA-DNAERLLKEM 439
Query: 86 --LVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLK---ADCKLYTTLITTCAKS 140
+ N +F ++ + S + A LR V E L+ L TTLI+ K
Sbjct: 440 LSIGFNVNQGSFTSVICLLCSHLMFDSA---LRFVGEMLLRNMSPGGGLLTTLISGLCKH 496
Query: 141 GKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVF 200
GK E++ + +N G + T AL+ G +AG++ +AF + + DRV +
Sbjct: 497 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 556
Query: 201 NALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMI 260
N LI+ C +D AF L EM + PD+ T L+ N +V+ A + +
Sbjct: 557 NTLISGCCGKKKLDEAFMFLDEMVK--RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 614
Query: 261 HKYNIKGTPEVYT--IAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAG 318
+ + P+VYT + I+ C + E +D+M K V P+ V + LI +G
Sbjct: 615 KRNGM--LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672
Query: 319 KVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMN 378
++ A E+ ++ K++GIS +Y+SL+ S ++A L+E M+ L+P V
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 379 ALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKED 438
ALI Q+ K +L +M S + PN ITY++++ R +V LL++ +E
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792
Query: 439 GVIPNLVMFKCII 451
G++P+ + +K I
Sbjct: 793 GIVPDSITYKEFI 805
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 190/460 (41%), Gaps = 46/460 (10%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARF--FNVCKSQKAIKEAFRFF-KLVPN 89
N + G++ E + L ME G+ ++ +C EAF F K+V
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD---EAFMFKEKMVER 337
Query: 90 ---PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAM 146
PTL T+++L+ +K A+ VL+ + + G + +Y LI + ++G ++
Sbjct: 338 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 397
Query: 147 FEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKA---------------FGAY------ 185
E+ MV+ G+ TY LI G K GQ A G++
Sbjct: 398 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 457
Query: 186 --------------GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVD 231
G M +N+ P + LI+ + G +A ++ + + VD
Sbjct: 458 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 517
Query: 232 PDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSV 291
T AL+ AG++D A + K I Y I+ C + A
Sbjct: 518 TR--TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 575
Query: 292 YDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSN 351
D+M K+G+ PD S LI + KVE A + + K G+ + +YS ++ C
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635
Query: 352 AKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTIT 411
A+ ++ E ++ M S ++P N LI A C +L +E+ DMK G+ PN+ T
Sbjct: 636 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 695
Query: 412 YSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
Y+ L+ VE +L + + +G+ PN+ + +I
Sbjct: 696 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/560 (21%), Positives = 230/560 (41%), Gaps = 61/560 (10%)
Query: 41 ISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN----PTLSTFN 96
+S C D E++ RK + +VY +F + A F ++ N P+ +T N
Sbjct: 191 LSLCFD--EEIRRKMSDLLIEVYCTQF-----KRDGCYLALDVFPVLANKGMFPSKTTCN 243
Query: 97 MLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNA 156
+L++ + + + + +V + G+ D L+TT I K GKV+ ++F +M A
Sbjct: 244 ILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 302
Query: 157 GIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRA 216
G+ PNV T+ +IDG G+ +AF M + ++P + ++ L+ ++ + A
Sbjct: 303 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 362
Query: 217 FDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAI 276
+ VL EM + P P+ I L+ + AG +++A E+ ++ + T Y I
Sbjct: 363 YFVLKEMTKKGFP--PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 420
Query: 277 NCCSQTGDWEFA--------------------------CS--VYD-------DMTKKGVI 301
+ G + A CS ++D +M + +
Sbjct: 421 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 480
Query: 302 PDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALEL 361
P L+ LI GK A E+ + N+G V + ++L+ A +A +
Sbjct: 481 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 540
Query: 362 YEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACER 421
+ + + N LI+ C +L + L +M GL P+ TYSIL+
Sbjct: 541 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 600
Query: 422 KDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSR--RYEKARTLNEHVLSFNSG----- 474
+ VE + K +G++P++ + +I C + R E+ + + ++S N
Sbjct: 601 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 660
Query: 475 -----RPQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLG 529
R + S+AL + + G P + ++ + + + + L E +
Sbjct: 661 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 720
Query: 530 VSADALKRSNLCSLIDGFGE 549
+ + +LIDG+G+
Sbjct: 721 MEGLEPNVFHYTALIDGYGK 740
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 38/328 (11%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLS- 93
L + G+ S+ ++L KG + + +A +C++ K + EAFR K +
Sbjct: 493 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK-LDEAFRIQKEILGRGCVM 551
Query: 94 ---TFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVF 150
++N L+S C K + AF L + + GLK D Y+ LI KV+ + +
Sbjct: 552 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 611
Query: 151 HEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQS 210
+ G+ P+V+TY +IDGC KA + + + M SKNV+P+ VV+N LI A +S
Sbjct: 612 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 671
Query: 211 GAVDRAFDVLAEMNAE-VHP--------------------------------VDPDHITI 237
G + A ++ +M + + P ++P+
Sbjct: 672 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 731
Query: 238 GALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTK 297
AL+ GQ+ + + + +H N+ YT+ I ++ G+ A + ++M +
Sbjct: 732 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 791
Query: 298 KGVIPDEVFLSALIDFAGHAGKVEAAFE 325
KG++PD + I G V AF+
Sbjct: 792 KGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 84/226 (37%), Gaps = 73/226 (32%)
Query: 32 YNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLV 87
YN LIR GR+S ++L EDM+ KG+
Sbjct: 661 YNHLIRAYCRSGRLSMALELREDMKHKGI------------------------------- 689
Query: 88 PNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMF 147
+P +T+ L+ ++ V+EA L
Sbjct: 690 -SPNSATYTSLIK----------GMSIISRVEEAKL------------------------ 714
Query: 148 EVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 207
+F EM G+EPNV Y ALIDG K GQ+ K M SKNV P+++ + +I
Sbjct: 715 -LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 773
Query: 208 GQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRA 253
+ G V A +L EM + + PD IT + G V A
Sbjct: 774 ARDGNVTEASRLLNEMREK--GIVPDSITYKEFIYGYLKQGGVLEA 817
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/546 (22%), Positives = 233/546 (42%), Gaps = 35/546 (6%)
Query: 30 HSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFK 85
++YN +I G+ E LLE KG + Y+ + + EA + F+
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC-ILTCLRKMGKVDEALKVFE 367
Query: 86 LVPN---PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGK 142
+ P LST+N+L+ + + + AF++ +Q+AGL + + ++ KS K
Sbjct: 368 EMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 202
+D +F EM P+ T+ +LIDG K G+V A+ Y M + + + +V+ +
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 203 LITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHK 262
LI G + + +M + PD + M AG+ ++ R +++ I
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQ--NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Query: 263 YNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEA 322
Y+I I+ + G ++ M ++G + D + +ID GKV
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 323 AFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALIT 382
A+++L+E K +G +++Y S++ + +A L+E KS +++ V ++LI
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 383 ALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIP 442
++ + +L ++ GL PN T++ LL A + +++ L+ KE P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 443 NLVMFKCII-GMCS-RRYEKARTLNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIP 500
N V + +I G+C R++ KA W + ++ + TI
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVF-----------------WQEMQ----KQGMKPSTIS 764
Query: 501 TVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYDPRAFSLLEE 560
++S + + + +R N GV A + + L +G D AFSL EE
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMD--AFSLFEE 822
Query: 561 AASFGI 566
G+
Sbjct: 823 TRRRGL 828
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 202/436 (46%), Gaps = 11/436 (2%)
Query: 24 DVSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKE 79
D + L +YN LI R G++ +L + M++ GL + + +CKSQK + E
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK-LDE 430
Query: 80 AFRFFK----LVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLIT 135
A F+ V P TF L+ + A++V + ++ + + +YT+LI
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 136 TCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKP 195
G+ + +++ +M+N P++ +D KAG+ K + ++++ P
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 196 DRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRARE 255
D ++ LI ++G + +++ M + +D I ++ G+V++A +
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI--VIDGFCKCGKVNKAYQ 608
Query: 256 VYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAG 315
+ + + + T Y I+ ++ + A ++++ K + + V S+LID G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 316 HAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVS 375
G+++ A+ IL+E +G++ + +++SL+ A A+ +AL ++ MK +K P
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 376 TMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQA 435
T LI LC + K +M+ G+ P+TI+Y+ ++ + ++ L +
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 436 KEDGVIPNLVMFKCII 451
K +G +P+ + +I
Sbjct: 789 KANGGVPDSACYNAMI 804
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 188/424 (44%), Gaps = 28/424 (6%)
Query: 90 PTLST-FNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P+++T M++ ++K EG + V++++++ + YTTLI + D M
Sbjct: 131 PSVNTCIEMVLGCVKANKLREG-YDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
+F +M G EP VH + LI G AK G+V A M+S ++ D V++N I + G
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+ G VD A+ E+ E + + PD +T +++ A ++D A E+++ + K
Sbjct: 250 KVGKVDMAWKFFHEI--EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y I G ++ A S+ + KG IP + + ++ GKV+ A ++ +
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
E K + + +Y+ L+ A A EL + M+ L P V T+N ++ LC
Sbjct: 368 EMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
+L + + +M P+ IT+ L+ + V+ + + + N +++
Sbjct: 427 KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYT 486
Query: 449 CIIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIPTVEVVSKV 508
+I FN GR + +K +Y++ I P +++++
Sbjct: 487 SLIKN----------------FFNHGRKEDGHK-------IYKDMINQNCSPDLQLLNTY 523
Query: 509 LGCL 512
+ C+
Sbjct: 524 MDCM 527
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 167/365 (45%), Gaps = 39/365 (10%)
Query: 75 KAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLI 134
+A+ E + + VP+ ++++L+ + + +++ ++E G D + Y +I
Sbjct: 537 RAMFEEIKARRFVPDA--RSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 135 TTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVK 194
K GKV+ +++ EM G EP V TYG++IDG AK ++ +A+ + +SK ++
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 195 PDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAR 254
+ V++++LI G+ G +D A+ +L E+ + + P+ T +L+ A A +++ A
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQK--GLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 255 EVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFA 314
++ + E C+ P++V LI+
Sbjct: 713 VCFQSMK------------------------ELKCT-----------PNQVTYGILINGL 737
Query: 315 GHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTV 374
K AF QE + QG+ ISY++++ + A N +A L++ K+ P
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 375 STMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQ 434
+ NA+I L +G++ + + + GL + T +LL + D +E ++ +
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAV 857
Query: 435 AKEDG 439
+E G
Sbjct: 858 LRETG 862
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 179/465 (38%), Gaps = 71/465 (15%)
Query: 88 PNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADC-KLYTTLITTCAKSGKVDAM 146
P P ++ V KD A + R + C + Y +L+ A+ DA+
Sbjct: 63 PQPEF-----VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDAL 117
Query: 147 FEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITA 206
++ EM AG P+V+T ++ GC KA ++ + + +MR +P F+A T
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRP---AFSAYTTL 174
Query: 207 CGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIK 266
G AV+ + D +++ + + +
Sbjct: 175 IGAFSAVNHS----------------------------------DMMLTLFQQMQELGYE 200
Query: 267 GTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEI 326
T ++T I ++ G + A S+ D+M + D V + ID G GKV+ A++
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 327 LQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCD 386
E + G+ ++Y+S++G A +A+E++EH++ + P N +I
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 387 GDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVM 446
+ + +L ++ G P+ I Y+ +L + V+ L + + K+D PNL
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLST 379
Query: 447 FKCIIGMCSR--RYEKARTLNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIPTVEV 504
+ +I M R + + A L + + AG P V
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQK-------------------------AGLFPNVRT 414
Query: 505 VSKVLGCLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGE 549
V+ ++ L D + E + CSLIDG G+
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 73/192 (38%), Gaps = 32/192 (16%)
Query: 39 GRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNML 98
GRI E +LE++ +KGL P L T+N L
Sbjct: 671 GRIDEAYLILEELMQKGL--------------------------------TPNLYTWNSL 698
Query: 99 MSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGI 158
+ +++ A + ++E + Y LI K K + F + EM G+
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 159 EPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFD 218
+P+ +Y +I G AKAG +A+A + ++ PD +NA+I AF
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 219 VLAEMNAEVHPV 230
+ E P+
Sbjct: 819 LFEETRRRGLPI 830
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 199/425 (46%), Gaps = 11/425 (2%)
Query: 33 NRLIRQGRISECIDLLEDM-ERKGLLDMDKVYHARFFNVCKSQKAIKEAF----RFFKLV 87
N +GR+SE + L++ M E K D+ V + N + + EA R +
Sbjct: 148 NGFCLEGRVSEAVALVDRMVEMKQRPDL--VTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 88 PNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMF 147
P T+ +++ S +S A + R ++E +KA Y+ +I + K G D
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 148 EVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 207
+F+EM GI+ +V TY +LI G G+ M +N+ PD V F+ALI
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 208 GQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKG 267
+ G + A ++ EM + PD IT +L+ + A +++ ++ +
Sbjct: 326 VKEGKLLEAKELYNEMIT--RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 268 TPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEIL 327
Y+I IN + + ++ +++ KG+IP+ + + L+ +GK+ AA E+
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 328 QEAKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCD 386
QE ++G+ +++Y L+ G C N + KALE++E M+ ++ + N +I +C+
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGE-LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 387 GDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVM 446
++ + + G+ P+ +TY++++ +K + ML + KEDG P+
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 447 FKCII 451
+ +I
Sbjct: 563 YNILI 567
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 211/466 (45%), Gaps = 21/466 (4%)
Query: 8 MLQFPYP-NGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHAR 66
M+Q P N K +N+ ++ L L+ I+E ++ R G++D+
Sbjct: 1 MIQRLIPLNRKASNF----TQILEKGTSLLHYSSITEAKLSYKERLRNGIVDI------- 49
Query: 67 FFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKAD 126
K AI + P PT FN L S A +K + + ++ G++ D
Sbjct: 50 -----KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHD 104
Query: 127 CKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYG 186
T +I + K+ F V G EP+ T+ L++G G+V++A
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 187 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACAN 246
M +PD V + LI G V A VL + E + PD +T G ++
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEAL-VLIDRMVE-YGFQPDEVTYGPVLNRLCK 222
Query: 247 AGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVF 306
+G A ++++ + + NIK + Y+I I+ + G ++ A S++++M KG+ D V
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 307 LSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMK 366
S+LI + GK + ++L+E + I ++++S+L+ +A ELY M
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 367 SIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVE 426
+ + P T N+LI C + L + ++ M S G P+ +TYSIL+ + + V+
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 427 VGLMLLSQAKEDGVIPNLVMFKC-IIGMC-SRRYEKARTLNEHVLS 470
G+ L + G+IPN + + ++G C S + A+ L + ++S
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 197/438 (44%), Gaps = 16/438 (3%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTL 92
N L +GR+SE + L++ M G + Y +CKS + A F+ + +
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS-ALALDLFRKMEERNI 241
Query: 93 STFNMLMSVCASSKDSEGAFQ-VLRLVQE---AGLKADCKLYTTLITTCAKSGKVDAMFE 148
+ S+ S +G+F L L E G+KAD Y++LI GK D +
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
+ EM+ I P+V T+ ALID K G++ +A Y M ++ + PD + +N+LI
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 209 QSGAVDRA---FDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIH-KYN 264
+ + A FD++ E PD +T L+ + A +VD +++ I K
Sbjct: 362 KENCLHEANQMFDLMVSKGCE-----PDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 265 IKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAF 324
I T T+ + C Q+G A ++ +M +GV P V L+D G++ A
Sbjct: 417 IPNTITYNTLVLGFC-QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 325 EILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITAL 384
EI ++ + +++GI Y+ ++ NA A L+ + +KP V T N +I L
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 385 CDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNL 444
C L + + MK G P+ TY+IL+ A + + L+ + K G +
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Query: 445 VMFKCIIGMCS-RRYEKA 461
K +I M S RR +K+
Sbjct: 596 STIKMVIDMLSDRRLDKS 613
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 140/316 (44%), Gaps = 22/316 (6%)
Query: 249 QVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLS 308
+V+ A ++++ + + TP + + ++T ++ M G+ D ++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 309 ALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSI 368
+I+ K+ AF +L A G I++S+L+ +A+ L + M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 369 KLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVG 428
K +P + T++ LI LC ++ + + ++ M G P+ +TY +L + + +
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 429 LMLLSQAKEDGVIPNLVMFKCII-GMCSR-RYEKARTL-NE--------HVLSFNS--GR 475
L L + +E + ++V + +I +C ++ A +L NE V++++S G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 476 PQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCL----QLPYNADIRERLVENLGVS 531
+ KW A M+ RE I IP V S ++ +L ++ ++ G++
Sbjct: 290 LCNDGKWDDGAKML-REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-GIA 347
Query: 532 ADALKRSNLCSLIDGF 547
D + + SLIDGF
Sbjct: 348 PDTITYN---SLIDGF 360
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 199/420 (47%), Gaps = 17/420 (4%)
Query: 33 NRLIRQGRISECIDLLEDMERKG----LLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVP 88
N L +GR+SE ++L++ M G L+ ++ + + +C S K + K+V
Sbjct: 166 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG----LCLSGKEAEAMLLIDKMVE 221
Query: 89 ---NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDA 145
P T+ +++V S + A ++LR ++E +K D Y+ +I K G +D
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 146 MFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALIT 205
F +F+EM GI N+ TY LI G AG+ M + + P+ V F+ LI
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 206 ACGQSGAVDRAFDVLAEMNAEVHP-VDPDHITIGALMKACANAGQVDRAREVYKMIHKYN 264
+ + G + A ++ EM +H + PD IT +L+ +D+A ++ ++
Sbjct: 342 SFVKEGKLREAEELHKEM---IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 265 IKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAF 324
+ I IN + + ++ M+ +GV+ D V + LI GK+ A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 325 EILQEAKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA 383
E+ QE ++ + I++Y L+ G C N ++ +KALE++E ++ K++ + N +I
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGES-EKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 384 LCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPN 443
+C+ ++ ++ + G+ P TY+I++ +K + +L + +EDG P+
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 177/404 (43%), Gaps = 44/404 (10%)
Query: 71 CKSQK---AIKEAFRFFKLVPNPTLSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKAD 126
C+ +K A + KL P TF+ L++ +C + SE V R+V E G K D
Sbjct: 134 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV-EMGHKPD 192
Query: 127 CKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYG 186
TL+ SGK + +MV G +PN TYG +++ K+GQ A A
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 252
Query: 187 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACAN 246
M +N+K D V ++ +I + G++D AF++ EM E+ + + IT L+ N
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM--EMKGITTNIITYNILIGGFCN 310
Query: 247 AGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVF 306
AG+ W+ + DM K+ + P+ V
Sbjct: 311 AGR-----------------------------------WDDGAKLLRDMIKRKINPNVVT 335
Query: 307 LSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMK 366
S LID GK+ A E+ +E ++GI+ I+Y+SL+ + KA ++ + M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 367 SIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVE 426
S P + T N LI C +++ +E+ M G+ +T+TY+ L+ +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 427 VGLMLLSQAKEDGVIPNLVMFKCII-GMCSR-RYEKARTLNEHV 468
V L + V PN+V +K ++ G+C EKA + E +
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 3/326 (0%)
Query: 130 YTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMR 189
++ L + AK+ + D + + +M GI N++T +I+ + ++ AF A G +
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 190 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQ 249
+P+ + F+ LI G V A +++ M H PD ITI L+ +G+
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK--PDLITINTLVNGLCLSGK 208
Query: 250 VDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSA 309
A + + +Y + Y +N ++G A + M ++ + D V S
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 310 LIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIK 369
+ID G ++ AF + E + +GI+ II+Y+ L+G NA W +L M K
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 370 LKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGL 429
+ P V T + LI + +L + E+ +M G+ P+TITY+ L+ +++ ++
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 430 MLLSQAKEDGVIPNLVMFKCII-GMC 454
++ G PN+ F +I G C
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYC 414
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 162/371 (43%), Gaps = 13/371 (3%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYH---ARFFNVCKSQKAIKEAFRFFKLVPNPT 91
L + G + +L +ME KG+ Y+ F N + K K NP
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 92 LSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
+ TF++L+ A ++ + + G+ D YT+LI K +D ++
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 152 EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
MV+ G +PN+ T+ LI+G KA ++ + M + V D V +N LI + G
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 212 AVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEV 271
++ A ++ EM + P P+ +T L+ + G+ ++A E+++ I K ++ +
Sbjct: 453 KLNVAKELFQEMVSRKVP--PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 272 YTIAIN--CCSQTGD--WEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEIL 327
Y I I+ C + D W+ CS + KGV P + +I G + A +
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCS----LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Query: 328 QEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDG 387
++ + G + +Y+ L+ A + K+++L E +K ST+ +I L DG
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626
Query: 388 DQLPKTMEVLS 398
+++LS
Sbjct: 627 RLKKSFLDMLS 637
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 2/365 (0%)
Query: 92 LSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
++ ++ +M D + V + ++E G Y LI K GK+ EV
Sbjct: 449 IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSR 508
Query: 152 EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
M G++ N+ TY +I+G K A AF + M + +KPD +++N +I+A G
Sbjct: 509 VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568
Query: 212 AVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEV 271
+DRA + EM H P T ++ A +G + R+ EV+ M+ + T
Sbjct: 569 NMDRAIQTVKEMQKLRH--RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 272 YTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAK 331
+ IN + E A + D+MT GV +E + ++ G AFE +
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 332 NQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLP 391
N+G+ V I +Y +L+ AC + Q AL + + M + + N LI +
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 392 KTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
+ +++ MK G+ P+ TY+ + AC + D+ + + + GV PN+ + +I
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 452 GMCSR 456
+R
Sbjct: 807 KGWAR 811
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 151/327 (46%), Gaps = 2/327 (0%)
Query: 92 LSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
L T++M+++ KD AF V + + G+K D LY +I+ G +D +
Sbjct: 519 LKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVK 578
Query: 152 EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
EM P T+ +I G AK+G + ++ + +MR P FN LI +
Sbjct: 579 EMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKR 638
Query: 212 AVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEV 271
+++A ++L EM + V + T +M+ A+ G +A E + + +
Sbjct: 639 QMEKAVEILDEMT--LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFT 696
Query: 272 YTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAK 331
Y + C ++G + A +V +M+ + + + + LID G V A +++Q+ K
Sbjct: 697 YEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK 756
Query: 332 NQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLP 391
+G+ I +Y+S + ACS A + +A + E M+++ +KP + T LI
Sbjct: 757 KEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPE 816
Query: 392 KTMEVLSDMKSLGLCPNTITYSILLVA 418
K + +MK++G+ P+ Y LL +
Sbjct: 817 KALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 161/348 (46%), Gaps = 2/348 (0%)
Query: 109 EGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGAL 168
E A ++R ++E G+ A +Y T++ VF + G P V TYG L
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 169 IDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVH 228
I+ K G+++KA +M+ + VK + ++ +I + AF V +M E
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE-- 548
Query: 229 PVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFA 288
+ PD I ++ A G +DRA + K + K + T + I+ +++GD +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 289 CSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGA 348
V+D M + G +P + LI+ ++E A EIL E G+S +Y+ +M
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 349 CSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPN 408
++ + KA E + +++ L + T AL+ A C ++ + V +M + + N
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 409 TITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSR 456
+ Y+IL+ R+ DV L+ Q K++GV P++ + I CS+
Sbjct: 729 SFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 165/357 (46%), Gaps = 9/357 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFF----KLVP 88
N + G+IS+ +++ M+ +G+ K Y + N K AF F K
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTY-SMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P + +N ++S + + A Q ++ +Q+ + + + +I AKSG + E
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
VF M G P VHT+ LI+G + Q+ KA M V + + ++
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
G +AF+ + E +D D T AL+KAC +G++ A V K + NI
Sbjct: 671 SVGDTGKAFEYFTRLQNE--GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 269 PEVYTIAINCCSQTGD-WEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEIL 327
VY I I+ ++ GD WE A + M K+GV PD ++ I AG + A + +
Sbjct: 729 SFVYNILIDGWARRGDVWE-AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 328 QEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITAL 384
+E + G+ I +Y++L+ + A +KAL YE MK++ +KP + + L+T+L
Sbjct: 788 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/525 (20%), Positives = 220/525 (41%), Gaps = 64/525 (12%)
Query: 84 FKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKV 143
F+ + P+ + F +++ D A + ++ G+ ++YT+LI A +
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 144 DAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNAL 203
D +M GIE ++ TY ++ G +KAG A + + + + ++ +
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420
Query: 204 ITACGQSGAVDRAFDVLAEMNAE--------VHPV------------------------- 230
I A Q+ ++RA ++ EM E H +
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF 480
Query: 231 DPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACS 290
P +T G L+ G++ +A EV +++ + +K + Y++ IN + DW A +
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 291 VYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACS 350
V++DM K+G+ PD + + +I G ++ A + ++E + ++ ++ +
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 351 NAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTI 410
+ + +++LE+++ M+ PTV T N LI L + Q+ K +E+L +M G+ N
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 411 TYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLS 470
TY+ ++ D ++ + +G+ ++ ++ ++ C +
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK-------------- 706
Query: 471 FNSGRPQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRE--RLVENL 528
SGR Q AL V +E + A IP V +L D+ E L++ +
Sbjct: 707 --SGRMQS-------ALAVTKE-MSARNIPRNSFVYNIL-IDGWARRGDVWEAADLIQQM 755
Query: 529 ---GVSADALKRSNLCSLIDGFGEYDPRAFSLLEEAASFGIVPCV 570
GV D ++ S G+ + RA +EE + G+ P +
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMN-RATQTIEEMEALGVKPNI 799
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 25 VSEQLHSYNRLIRQ----GRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEA 80
VS H+Y ++++ G + + ++ +GL D+D + C ++ A
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL-DVDIFTYEALLKACCKSGRMQSA 713
Query: 81 FRFFKL-----VPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLIT 135
K +P + +N+L+ A D A +++ +++ G+K D YT+ I+
Sbjct: 714 LAVTKEMSARNIPRNSF-VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 136 TCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKP 195
C+K+G ++ + EM G++PN+ TY LI G A+A KA Y M++ +KP
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP 832
Query: 196 DRVVFNALITACGQSGAVDRAF 217
D+ V++ L+T+ ++ A+
Sbjct: 833 DKAVYHCLLTSLLSRASIAEAY 854
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 22 AHDVSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAI 77
A ++ YN LI R+G + E DL++ M+++G+
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV--------------------- 760
Query: 78 KEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTC 137
P + T+ +S C+ + D A Q + ++ G+K + K YTTLI
Sbjct: 761 -----------KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Query: 138 AKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIM 188
A++ + + EM GI+P+ Y L+ +A+A+ G+M
Sbjct: 810 ARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVM 860
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 197/409 (48%), Gaps = 9/409 (2%)
Query: 40 RISECIDLLEDMERKGL----LDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTF 95
RIS+ + L++ M G + + H F + K+ +A+ R + P L T+
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTY 228
Query: 96 NMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVN 155
++++ D + AF +L ++ A ++A+ +Y+T+I + K D +F EM N
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 156 AGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDR 215
G+ PNV TY +LI + + A M + + P+ V FNALI A + G +
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 216 AFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIA 275
A + EM +DPD T +L+ ++D A+ +++++ + Y
Sbjct: 349 AEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 276 INCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGI 335
IN + + ++ +M+++G++ + V + LI A + A + ++ + G+
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 336 SVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTM 394
I++Y++L+ G C N K +KA+ ++E+++ K++PT+ T N +I +C ++
Sbjct: 467 HPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 395 EVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPN 443
++ + G+ P+ I Y+ ++ RK E L + +EDG +P+
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 192/449 (42%), Gaps = 46/449 (10%)
Query: 29 LHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCK-SQKAIKEAF-- 81
+ +N+L+ + + I L E M+R G+ Y+ C+ SQ ++ A
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 82 RFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG 141
+ KL P++ T + L++ K A ++ + E G + D +TTLI
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 142 KVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFN 201
K + MV G +PN+ TYG +++G K G + AF M + ++ + V+++
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 202 ALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIH 261
+I + + D A ++ EM E V P+ IT
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEM--ENKGVRPNVIT------------------------- 297
Query: 262 KYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVE 321
Y+ I+C W A + DM ++ + P+ V +ALID GK+
Sbjct: 298 ----------YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 322 AAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALI 381
A ++ E + I I +YSSL+ +A ++E M S P V T N LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 382 TALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVI 441
C ++ + +E+ +M GL NT+TY+ L+ + D + M+ Q DGV
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 442 PNLVMFKCII-GMCSR-RYEKARTLNEHV 468
PN++ + ++ G+C + EKA + E++
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 199/441 (45%), Gaps = 12/441 (2%)
Query: 25 VSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQK---AI 77
+S L++YN LI R+ +IS + LL M + G + C ++ A+
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 78 KEAFRFFKLVPNPTLSTFNMLM-SVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITT 136
+ ++ P TF L+ + +K SE V R+VQ G + + Y ++
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNG 234
Query: 137 CAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPD 196
K G +D F + ++M A IE NV Y +ID K A + M +K V+P+
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 197 RVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREV 256
+ +++LI+ A +L++M ++P+ +T AL+ A G++ A ++
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIER--KINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 257 YKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGH 316
Y + K +I Y+ IN + A +++ M K P+ V + LI+
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 317 AGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVST 376
A +++ E+ +E +G+ ++Y++L+ A++ A +++ M S + P + T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 377 MNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAK 436
N L+ LC +L K M V ++ + P TY+I++ + VE G L
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 437 EDGVIPNLVMFKCII-GMCSR 456
GV P+++++ +I G C +
Sbjct: 533 LKGVKPDVIIYNTMISGFCRK 553
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 123/280 (43%), Gaps = 14/280 (5%)
Query: 285 WEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSS 344
++ S+ + M + G+ + + LI+ ++ A +L + G I++ SS
Sbjct: 101 FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 345 LMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLG 404
L+ + K A+ L + M + +P T LI L ++ + + ++ M G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 405 LCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSRRYEKART 463
PN +TY +++ ++ D+++ LL++ + + N+V++ +I +C R+E
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD-A 279
Query: 464 LNEHVLSFNSG-RPQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADI-- 520
LN N G RP + + ++ + E + +++ + + + +NA I
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 521 ---RERLVENLGVSADALKRS------NLCSLIDGFGEYD 551
+LVE + + +KRS SLI+GF +D
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Score = 39.3 bits (90), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 333 QGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPK 392
+ S G Y ++ ++ A+ L+ M + P++ N L++A+ +
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 393 TMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII- 451
+ + M+ LG+ N TY+IL+ R+ + + L LL + + G P++V ++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 452 GMC 454
G C
Sbjct: 164 GYC 166
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 194/423 (45%), Gaps = 7/423 (1%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN--- 89
N L +GR+SE ++L++ M G +A +C + K ++V
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P T+ ++ V S + A ++LR ++E +K D Y+ +I K G +D F +
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
F+EM G + ++ Y LI G AG+ M + + PD V F+ALI +
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTP 269
G + A ++ EM + PD +T +L+ Q+D+A + ++
Sbjct: 330 EGKLREAEELHKEMIQ--RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 270 EVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQE 329
+ I IN + + ++ M+ +GV+ D V + LI GK+E A E+ QE
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 330 AKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
++ + I+SY L+ G C N + +KALE++E ++ K++ + N +I +C+
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEP-EKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
++ ++ + G+ P+ TY+I++ +K + +L + +EDG PN +
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 449 CII 451
+I
Sbjct: 567 ILI 569
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 192/452 (42%), Gaps = 21/452 (4%)
Query: 31 SYNRLIRQGRIS----ECIDLLEDMERKG----LLDMDKVYHARFFNVCKSQKAIKEAFR 82
SY +R G + + +DL ++M R L+D +R F+V K
Sbjct: 39 SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDF-----SRLFSVVARTKQYDLVLD 93
Query: 83 FFKLVP----NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCA 138
K + L T +++++ C + AF + + + G + D ++TLI
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 139 KSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRV 198
G+V E+ MV G +P + T AL++G G+V+ A M +P+ V
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 199 VFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYK 258
+ ++ +SG A ++L +M E + D + ++ G +D A ++
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKM--EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 259 MIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAG 318
+ K +YT I G W+ + DM K+ + PD V SALID G
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 319 KVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMN 378
K+ A E+ +E +GIS ++Y+SL+ KA + + M S P + T N
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 379 ALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKED 438
LI C + + +E+ M G+ +T+TY+ L+ +EV L +
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 439 GVIPNLVMFKCII-GMCSR-RYEKARTLNEHV 468
V P++V +K ++ G+C EKA + E +
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 157/371 (42%), Gaps = 13/371 (3%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQK---AIKEAFRFFKLVPNPT 91
L + G + +L +ME KG +Y C + + K K P
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 92 LSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
+ F+ L+ A ++ + + + G+ D YT+LI K ++D +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 152 EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
MV+ G PN+ T+ LI+G KA + + M + V D V +N LI + G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 212 AVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEV 271
++ A ++ EM + V PD ++ L+ + G+ ++A E+++ I K ++ +
Sbjct: 437 KLEVAKELFQEMVS--RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 272 YTIAIN--CCSQTGD--WEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEIL 327
Y I I+ C + D W+ CS + KGV PD + +I G + A +
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCS----LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 328 QEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDG 387
++ + G S +Y+ L+ A + K+ +L E +K ST+ ++ L DG
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Query: 388 DQLPKTMEVLS 398
+++LS
Sbjct: 611 RLKKSFLDMLS 621
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 188/425 (44%), Gaps = 6/425 (1%)
Query: 33 NRLIRQGRISECIDLLEDMERKGL----LDMDKVYHARFFNVCKSQKAIKEAFRFFKLVP 88
N RISE + L++ M G + + H F K+ +A+ R
Sbjct: 153 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG-LFQHNKASEAVALVERMVVKGC 211
Query: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P L T+ +++ + + A +L +++ ++AD +Y T+I K +D F+
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
+F++M GI+P+V TY LI G+ + A M KN+ PD V FNALI A
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+ G + A + EM H PD + L+K +V+ EV++ + + + G
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCF-PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
YT I+ Q D + A V+ M GV PD + + L+D + G VE A + +
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
+ + + + I++Y++++ A A + +L+ + +KP V T +++ C
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
+ + +MK G PN+ TY+ L+ A R D L+ + + G + F
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Query: 449 CIIGM 453
+ M
Sbjct: 571 LVTNM 575
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 192/427 (44%), Gaps = 11/427 (2%)
Query: 37 RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCK-SQKAIKEAF--RFFKLVPNPTLS 93
+ + I L E M+ G+ Y C+ SQ ++ A + KL P++
Sbjct: 87 KMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIV 146
Query: 94 TFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHE 152
T N L++ C ++ SE V ++V E G + D +TTL+ + K +
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMV-EMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 205
Query: 153 MVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGA 212
MV G +P++ TYGA+I+G K G+ A M ++ D V++N +I +
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 213 VDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQ-VDRAREVYKMIHKYNIKGTPEV 271
+D AFD+ +M E + PD T L+ N G+ D +R + M+ K NI
Sbjct: 266 MDDAFDLFNKM--ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NINPDLVF 322
Query: 272 YTIAINCCSQTGDWEFACSVYDDMTK-KGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330
+ I+ + G A +YD+M K K PD V + LI +VE E+ +E
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 331 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQL 390
+G+ ++Y++L+ A++ A +++ M S + P + T N L+ LC+ +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442
Query: 391 PKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCI 450
+ V M+ + + +TY+ ++ A + VE G L GV PN+V + +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 451 I-GMCSR 456
+ G C +
Sbjct: 503 MSGFCRK 509
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 176/412 (42%), Gaps = 16/412 (3%)
Query: 46 DLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASS 105
D E++ RK L D+ K AI K P P++ F+ L+S A
Sbjct: 41 DCRENLSRKVLQDL------------KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM 88
Query: 106 KDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTY 165
+ + +Q G+ + Y+ I + ++ + +M+ G P++ T
Sbjct: 89 NKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTL 148
Query: 166 GALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNA 225
+L++G ++++A M +PD V F L+ Q A ++ M
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM-- 206
Query: 226 EVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDW 285
V PD +T GA++ G+ D A + + K I+ +Y I+ +
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 286 EFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSL 345
+ A +++ M KG+ PD + LI + G+ A +L + + I+ ++ +++L
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 346 MGACSNAKNWQKALELYEHM-KSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLG 404
+ A +A +LY+ M KS P V N LI C ++ + MEV +M G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 405 LCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCS 455
L NT+TY+ L+ + D + M+ Q DGV P+++ + ++ G+C+
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 161/372 (43%), Gaps = 10/372 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKV-YHARFFNVCKSQKAIKEAFRFFKLVPN-- 89
N L ++G ++LL ME KG ++ D V Y+ +CK K + +AF F +
Sbjct: 223 NGLCKRGEPDLALNLLNKME-KGKIEADVVIYNTIIDGLCK-YKHMDDAFDLFNKMETKG 280
Query: 90 --PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMF 147
P + T+N L+S + A ++L + E + D + LI K GK+
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 148 EVFHEMVNAG-IEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITA 206
+++ EMV + P+V Y LI G K +V + + M + + + V + LI
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 207 CGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIK 266
Q+ D A V +M ++ V PD +T L+ N G V+ A V++ + K ++K
Sbjct: 401 FFQARDCDNAQMVFKQMVSD--GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 267 GTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEI 326
YT I + G E ++ ++ KGV P+ V + ++ G E A +
Sbjct: 459 LDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Query: 327 LQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCD 386
E K G +Y++L+ A + + EL + M+S ST + L D
Sbjct: 519 FVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD 578
Query: 387 GDQLPKTMEVLS 398
G +++LS
Sbjct: 579 GRLDKSFLDMLS 590
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 288 ACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMG 347
A ++ DM K P V S L+ K + + ++ +N GIS + +YS +
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 348 ACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCP 407
AL + M + P++ T+N+L+ C G+++ + + ++ M +G P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 408 NTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSR 456
+T+T++ L+ + + + L+ + G P+LV + +I G+C R
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 200/436 (45%), Gaps = 9/436 (2%)
Query: 21 YAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGL----LDMDKVYHARFFNVCKSQKA 76
Y D+ N RIS+ + L++ M G + H F + K+ +A
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH-NKASEA 207
Query: 77 IKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITT 136
+ + + P L T+ +++ D + A +L+ +++ ++AD +Y T+I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 137 CAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPD 196
K +D +F EM N GI P+V TY +LI G+ + A M + + P+
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 197 RVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREV 256
V F+ALI A + G + A + EM +DPD T +L+ ++D A+ +
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 257 YKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGH 316
++++ + Y+ I + E ++ +M+++G++ + V + LI
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 317 AGKVEAAFEILQEAKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVS 375
A + A + ++ + G+ I++Y+ L+ G C N K KA+ ++E+++ ++P +
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK-LAKAMVVFEYLQRSTMEPDIY 504
Query: 376 TMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQA 435
T N +I +C ++ E+ ++ G+ PN I Y+ ++ RK E LL +
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 436 KEDGVIPNLVMFKCII 451
KEDG +PN + +I
Sbjct: 565 KEDGPLPNSGTYNTLI 580
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 203/442 (45%), Gaps = 14/442 (3%)
Query: 25 VSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFN-VCKSQK---A 76
+S L++Y+ I R+ ++S + +L M + G + D V + N C S++ A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY-EPDIVTLSSLLNGYCHSKRISDA 172
Query: 77 IKEAFRFFKLVPNPTLSTFNMLM-SVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLIT 135
+ + ++ P TF L+ + +K SE V ++VQ G + D Y T++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVN 231
Query: 136 TCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKP 195
K G +D + +M IE +V Y +IDG K + A + M +K ++P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 196 DRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRARE 255
D +++LI+ G A +L++M ++P+ +T AL+ A G++ A +
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 256 VYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAG 315
+Y + K +I Y+ IN + A +++ M K P+ V S LI
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 316 HAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVS 375
A +VE E+ +E +G+ ++Y++L+ A++ A +++ M S+ + P +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 376 TMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQA 435
T N L+ LC +L K M V ++ + P+ TY+I++ + VE G L
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 436 KEDGVIPNLVMFKCII-GMCSR 456
GV PN++ + +I G C +
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRK 551
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 183/448 (40%), Gaps = 39/448 (8%)
Query: 58 DMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRL 117
D ++ R ++ K A+ K P P++ FN L+S A E +
Sbjct: 49 DYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQ 108
Query: 118 VQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQ 177
+Q G+ D Y+ I + ++ V +M+ G EP++ T +L++G + +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 178 VAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITI 237
++ A M KPD F LI A ++ +M PD +T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ--RGCQPDLVTY 226
Query: 238 GALMKACANAGQVDRAREVYKMIHK---------YNI----------------------- 265
G ++ G +D A + K + K YN
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 266 KGT-PEVYTIA--INCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEA 322
KG P+V+T + I+C G W A + DM ++ + P+ V SALID GK+
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 323 AFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALIT 382
A ++ E + I I +YSSL+ +A ++E M S P V T + LI
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 383 ALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIP 442
C ++ + ME+ +M GL NT+TY+ L+ + D + M+ Q GV P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 443 NLVMFKCII-GMCSR-RYEKARTLNEHV 468
N++ + ++ G+C + KA + E++
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYL 494
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 185/389 (47%), Gaps = 11/389 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKV-YHARFFNVCKSQKAIKEAFRFFKLVPN-- 89
N L ++G I + LL+ ME KG ++ D V Y+ +CK K + +A F + N
Sbjct: 231 NGLCKRGDIDLALSLLKKME-KGKIEADVVIYNTIIDGLCK-YKHMDDALNLFTEMDNKG 288
Query: 90 --PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMF 147
P + T++ L+S + A ++L + E + + ++ LI K GK+
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 148 EVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 207
+++ EM+ I+P++ TY +LI+G ++ +A + +M SK+ P+ V ++ LI
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 208 GQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKG 267
++ V+ ++ EM+ + + +T L+ A D A+ V+K + +
Sbjct: 409 CKAKRVEEGMELFREMSQ--RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 268 TPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEIL 327
Y I ++ + G A V++ + + + PD + +I+ AGKVE +E+
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 328 QEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA-LCD 386
+G+S +I+Y++++ + ++A L + MK P T N LI A L D
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 387 GDQLPKTMEVLSDMKSLGLCPNTITYSIL 415
GD+ + E++ +M+S G + T ++
Sbjct: 587 GDR-EASAELIKEMRSCGFAGDASTIGLV 614
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 201/434 (46%), Gaps = 9/434 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGL----LDMDKVYHARFFNVCKSQKAIKEAFRFFKLVP 88
N RISE + L++ M G + + H F K+ +A+ R
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG-LFQHNKASEAVALVERMVVKGC 201
Query: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P L T+ +++ + + A +L +++ ++AD +Y+T+I + K VD
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
+F EM N GI P+V TY +LI G+ + A M + + P+ V FN+LI A
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+ G + A + EM +DP+ +T +L+ ++D A++++ ++ +
Sbjct: 322 KEGKLIEAEKLFDEMIQR--SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y IN + ++ DM+++G++ + V + LI A + A + +
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 329 EAKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDG 387
+ + G+ I++Y++L+ G C N K +KA+ ++E+++ K++P + T N + +C
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 388 DQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMF 447
++ ++ + G+ P+ I Y+ ++ +K E L + KEDG +P+ +
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 448 KCIIGMCSRRYEKA 461
+I R +KA
Sbjct: 559 NTLIRAHLRDGDKA 572
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 173/390 (44%), Gaps = 41/390 (10%)
Query: 82 RFFKLVPNPTLSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKS 140
+ KL P++ T N L++ C ++ SE V ++V E G + D +TTL+ +
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV-EMGYQPDTVTFTTLVHGLFQH 183
Query: 141 GKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVF 200
K + MV G +P++ TYGA+I+G K G+ A M ++ D V++
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 201 NALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMI 260
+ +I + + VD A ++ EM+ + + PD T
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNK--GIRPDVFT------------------------ 277
Query: 261 HKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKV 320
Y+ I+C G W A + DM ++ + P+ V ++LID GK+
Sbjct: 278 -----------YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 321 EAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNAL 380
A ++ E + I I++Y+SL+ +A +++ M S P V T N L
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 381 ITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGV 440
I C ++ ME+ DM GL NT+TY+ L+ + D + M+ Q DGV
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 441 IPNLVMFKCII-GMCSR-RYEKARTLNEHV 468
PN++ + ++ G+C + EKA + E++
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 179/388 (46%), Gaps = 9/388 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN--- 89
N L ++G ++LL ME KG ++ D V ++ + + + +A F + N
Sbjct: 213 NGLCKRGEPDLALNLLNKME-KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 90 -PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P + T++ L+S + A ++L + E + + + +LI AK GK+ +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
+F EM+ I+PN+ TY +LI+G ++ +A + +M SK+ PD V +N LI
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
++ V ++ +M+ + + +T L+ A D A+ V+K + +
Sbjct: 392 KAKKVVDGMELFRDMSRR--GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y ++ + G E A V++ + K + PD + + + AGKVE +++
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA-LCDG 387
+G+ +I+Y++++ ++A L+ MK P T N LI A L DG
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 388 DQLPKTMEVLSDMKSLGLCPNTITYSIL 415
D+ + E++ +M+S + TY ++
Sbjct: 570 DK-AASAELIKEMRSCRFAGDASTYGLV 596
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 13/256 (5%)
Query: 31 SYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIK--EAFRFF 84
+YN LI R+ E + M K L Y+ CK++K + E FR
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 85 K---LVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG 141
LV N T+ L+ + D + A V + + G+ + Y TL+ K+G
Sbjct: 407 SRRGLVGNTV--TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 142 KVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFN 201
K++ VF + + +EP+++TY + +G KAG+V + + + K VKPD + +N
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 202 ALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIH 261
+I+ + G + A+ + +M E P+ PD T L++A G + E+ K +
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMK-EDGPL-PDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Query: 262 KYNIKGTPEVYTIAIN 277
G Y + +
Sbjct: 583 SCRFAGDASTYGLVTD 598
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 216/489 (44%), Gaps = 41/489 (8%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P + T+N L+S +S E AF+++ + G Y T+I K GK + EV
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
F EM+ +G+ P+ TY +L+ K G V + + MRS++V PD V F+++++ +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 210 SGAVDRA---FDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVY-KMIHKYNI 265
SG +D+A F+ + E + PD++ L++ G + A + +M+ +
Sbjct: 388 SGNLDKALMYFNSVKEAG-----LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 266 KGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFE 325
TI C + E A ++++MT++ + PD L+ LID G ++ A E
Sbjct: 443 MDVVTYNTILHGLCKRKMLGE-ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 326 ILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALC 385
+ Q+ K + I + +++Y++L+ + A E++ M S ++ PT + + L+ ALC
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 386 DGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLV 445
L + V +M S + P + + ++ R + G L + +G +P+ +
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 446 MFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIPTVEVV 505
+ +I G + EN + L+ E G +P V
Sbjct: 622 SYNTLI---------------------YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 506 SKVLGCL----QLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYD--PRAFSLLE 559
+ +L Q+ + +++E GV+ D RS +I+GF D AF + +
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIER-GVNPD---RSTYTCMINGFVSQDNLTEAFRIHD 716
Query: 560 EAASFGIVP 568
E G P
Sbjct: 717 EMLQRGFSP 725
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 186/436 (42%), Gaps = 23/436 (5%)
Query: 31 SYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQK--AIKEAF-RF 83
+YN LI +G + E +L+ M KG Y+ +CK K KE F
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 84 FKLVPNPTLSTF-NMLMSVCASSK--DSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKS 140
+ +P +T+ ++LM C ++E F +R + D ++++++ +S
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR---SRDVVPDLVCFSSMMSLFTRS 388
Query: 141 GKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVF 200
G +D F+ + AG+ P+ Y LI G + G ++ A M + D V +
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 201 NALITA-CGQS--GAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVY 257
N ++ C + G D+ F+ + E + PD T+ L+ G + A E++
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTE-----RALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 258 KMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHA 317
+ + + I+ Y ++ + GD + A ++ DM K ++P + S L++
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 318 GKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTM 377
G + AF + E ++ I ++ +S++ + N E M S P +
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 378 NALITALCDGDQLPKTMEVLSDMKSL--GLCPNTITYSILLVACERKDDVEVGLMLLSQA 435
N LI + + K ++ M+ GL P+ TY+ +L R++ ++ ++L +
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Query: 436 KEDGVIPNLVMFKCII 451
E GV P+ + C+I
Sbjct: 684 IERGVNPDRSTYTCMI 699
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 171/385 (44%), Gaps = 59/385 (15%)
Query: 74 QKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTL 133
Q+ + + F + +LS M+ + S + S+ +LR+++ +G+ + ++ +L
Sbjct: 96 QRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGV-SRLEIVNSL 154
Query: 134 ITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNV 193
+T + G D++F++ + TY +A ++ +A A+ ++RSK
Sbjct: 155 DSTFSNCGSNDSVFDLL-----------IRTY-------VQARKLREAHEAFTLLRSKG- 195
Query: 194 KPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRA 253
F I AC AL+ + G V+ A
Sbjct: 196 ------FTVSIDACN------------------------------ALIGSLVRIGWVELA 219
Query: 254 REVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDF 313
VY+ I + + I +N + G E + + +KGV PD V + LI
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 314 AGHAGKVEAAFEILQEAKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKP 372
G +E AFE++ +G S G+ +Y++++ G C + K +++A E++ M L P
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK-YERAKEVFAEMLRSGLSP 338
Query: 373 TVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLL 432
+T +L+ C + +T +V SDM+S + P+ + +S ++ R +++ LM
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 433 SQAKEDGVIPNLVMFKCII-GMCSR 456
+ KE G+IP+ V++ +I G C +
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRK 423
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 133/310 (42%), Gaps = 42/310 (13%)
Query: 37 RQGRISECIDLLEDMERKGLLDMDKV-YHARFFNVCKSQKAIKEAFRFFKLVPN----PT 91
R+G IS ++L +M ++G MD V Y+ +CK +K + EA + F + P
Sbjct: 422 RKGMISVAMNLRNEMLQQGCA-MDVVTYNTILHGLCK-RKMLGEADKLFNEMTERALFPD 479
Query: 92 LSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
T +L+ + + A ++ + ++E ++ D Y TL+ K G +D E++
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 152 EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
+MV+ I P +Y L++ G +A+AF + M SKN+KP ++ N++I +SG
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 212 A-----------------------------------VDRAFDVLAEMNAEVHPVDPDHIT 236
+ +AF ++ +M E + PD T
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 237 IGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMT 296
+++ Q+ A V + + + + YT IN + A ++D+M
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 297 KKGVIPDEVF 306
++G PD+ F
Sbjct: 720 QRGFSPDDKF 729
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 26/268 (9%)
Query: 303 DEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELY 362
D VF LI A K+ A E +++G +V I + ++L+G+ + A +Y
Sbjct: 165 DSVF-DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 363 EHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERK 422
+ + + V T+N ++ ALC ++ K LS ++ G+ P+ +TY+ L+ A K
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 423 DDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSR-RYEKARTLNEHVLSFNSGRPQIEN 480
+E L++ G P + + +I G+C +YE+A+ + +L SG
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML--RSGLSPDST 341
Query: 481 KWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADALKRSNL 540
+ SL + EA G + E V +D+R R V D + S++
Sbjct: 342 TYRSLLM----EACKKGDVVETEKVF-----------SDMRSR-----DVVPDLVCFSSM 381
Query: 541 CSLIDGFGEYDPRAFSLLEEAASFGIVP 568
SL G D +A G++P
Sbjct: 382 MSLFTRSGNLD-KALMYFNSVKEAGLIP 408
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 72/169 (42%), Gaps = 5/169 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN--- 89
N L +G ++E + ++M K + + ++ C+S A K++
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQE--AGLKADCKLYTTLITTCAKSGKVDAMF 147
P ++N L+ ++ AF +++ ++E GL D Y +++ + ++
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 148 EVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPD 196
V +M+ G+ P+ TY +I+G + +AF + M + PD
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 185/437 (42%), Gaps = 25/437 (5%)
Query: 31 SYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEA------ 80
+YN LI R I + ++L+ M + G Y + F N +++ +
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDG-------YQSDFVNYSLVIQSLTRSNKIDSV 251
Query: 81 --FRFFKLVPNPTL----STFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLI 134
R +K + L N ++ A S D A Q+L + Q GL A ++I
Sbjct: 252 MLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSII 311
Query: 135 TTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVK 194
+ A SG+ +F E+ +GI+P Y AL+ G K G + A M + V
Sbjct: 312 SALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS 371
Query: 195 PDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAR 254
PD ++ LI A +G + A VL EM E V P+ L+ + G+ +
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEM--EAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 255 EVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFA 314
+V K + +K + Y + I+ + + A + +D M +G+ PD V + LID
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 315 GHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTV 374
G+ A E+ + + +G +Y+ ++ + + + W L MKS + P V
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 375 STMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQ 434
T L+ + +E L +MKS+GL P++ Y+ L+ A ++ E +
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 435 AKEDGVIPNLVMFKCII 451
DG+ P+L+ +I
Sbjct: 610 MTSDGLKPSLLALNSLI 626
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 155/337 (45%), Gaps = 2/337 (0%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P +N L+ + + A ++ +++ G+ D Y+ LI +G+ ++ V
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
EM ++PN + L+ G G+ K F M+S VKPDR +N +I G+
Sbjct: 397 LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTP 269
+D A M +E ++PD +T L+ G+ A E+++ + +
Sbjct: 457 FNCLDHAMTTFDRMLSE--GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 270 EVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQE 329
Y I IN W+ + M +G++P+ V + L+D G +G+ A E L+E
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389
K+ G+ Y++L+ A + ++A+ + M S LKP++ +N+LI A + +
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 634
Query: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVE 426
+ VL MK G+ P+ +TY+ L+ A R D +
Sbjct: 635 DAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQ 671
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 124/544 (22%), Positives = 214/544 (39%), Gaps = 126/544 (23%)
Query: 129 LYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIM 188
LY+ LI +S K ++E F + P TY ALI CA+ + KA M
Sbjct: 169 LYSILIHALGRSEK---LYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKM 223
Query: 189 RSKNVKPDRVVFNALITACGQSGAVD-----RAFDVLA--EMNAEVHPV----------- 230
R + D V ++ +I + +S +D R + + ++ +V V
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 231 DPDH-----------------ITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYT 273
DP T+ +++ A A++G+ A +++ + + IK Y
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 274 IAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQ 333
+ +TG + A S+ +M K+GV PDE S LID +AG+ E+A +L+E +
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 334 GISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKT 393
+ +S L+ + WQK ++ + MKSI +KP N +I + L
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 394 MEVLSDMKSLGLCPNTITYSILL------------------------VAC---------- 419
M M S G+ P+ +T++ L+ + C
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523
Query: 420 ----ERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGR 475
ER DD++ LL + K G++PN+V ++ + Y K+ N+
Sbjct: 524 YGDQERWDDMK---RLLGKMKSQGILPNVVTHTTLVDV----YGKSGRFND--------- 567
Query: 476 PQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGV-SADA 534
A+ E G P+ + + ++ + E+ V V ++D
Sbjct: 568 ----------AIECLEEMKSVGLKPSSTMYNALINAYA---QRGLSEQAVNAFRVMTSDG 614
Query: 535 LKRSNLC--SLIDGFGE--YDPRAFSLLEEAASFGIVPCV--------------SFKEIP 576
LK S L SLI+ FGE D AF++L+ G+ P V F+++P
Sbjct: 615 LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVP 674
Query: 577 VVVD 580
VV +
Sbjct: 675 VVYE 678
>sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720
OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1
Length = 822
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 198/432 (45%), Gaps = 13/432 (3%)
Query: 30 HSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFK 85
+Y+ LI R G+ ++L++DM R + Y+ N C S +EA K
Sbjct: 179 ETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYN-NLINACGSSGNWREALEVCK 237
Query: 86 LVPN----PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG 141
+ + P L T N+++S S + A L++ A ++ D + +I +K G
Sbjct: 238 KMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLG 297
Query: 142 KVDAMFEVFHEMVNAGIE--PNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVV 199
+ ++F+ M E P+V T+ +++ + G++ + M ++ +KP+ V
Sbjct: 298 QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 357
Query: 200 FNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKM 259
+NAL+ A G A VL ++ + + PD ++ L+ + + Q +A+EV+ M
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQ--NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 260 IHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGK 319
+ K K Y I+ G A ++ M + G+ P+ V + L+ + K
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 320 VEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNA 379
+L A+++GI++ +Y+S +G+ NA +KA+ LY+ M+ K+K T
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 380 LITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDG 439
LI+ C + P+ + L +M+ L + YS +L A ++ V + +Q K G
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 440 VIPNLVMFKCII 451
P+++ + ++
Sbjct: 596 CEPDVIAYTSML 607
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 160/359 (44%), Gaps = 15/359 (4%)
Query: 129 LYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIM 188
+Y +I A+ VD +F EM +P+ TY ALI+ +AGQ A M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 189 RSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAG 248
+ P R +N LI ACG SG A +V +M + V PD +T ++ A +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTD--NGVGPDLVTHNIVLSAYKSGR 262
Query: 249 QVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGV--IPDEVF 306
Q +A ++++ ++ + I I C S+ G A +++ M +K PD V
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 307 LSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMK 366
++++ G++E + + +G+ I+SY++LMGA + AL + +K
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 367 SIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVE 426
+ P V + L+ + Q K EV M+ PN +TY+ L+ A +
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 427 VGLMLLSQAKEDGVIPNLVMFKCIIGMCSRRYEK-----------ARTLNEHVLSFNSG 474
+ + Q ++DG+ PN+V ++ CSR +K +R +N + ++NS
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 184/443 (41%), Gaps = 11/443 (2%)
Query: 22 AHDVSEQLHSYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAI 77
A + + SYN L+ G + +L D+++ G++ D V + N +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP-DVVSYTCLLNSYGRSRQP 406
Query: 78 KEAFRFFKLVPN----PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTL 133
+A F ++ P + T+N L+ S+ A ++ R +++ G+K + TL
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 134 ITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNV 193
+ C++S K + V + GI N Y + I A ++ KA Y MR K V
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 194 KPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRA 253
K D V F LI+ + A L EM P+ + +++ A + GQV A
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE--VYSSVLCAYSKQGQVTEA 584
Query: 254 REVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDF 313
++ + + YT ++ + + W AC ++ +M G+ PD + SAL+
Sbjct: 585 ESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 644
Query: 314 AGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPT 373
G+ F ++ + + I + + AC+ + W++A++L + M +
Sbjct: 645 FNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLS 704
Query: 374 VSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLS 433
+ N ++ ++ M++ + + G+ N TY+ILL + + +L
Sbjct: 705 IGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLE 764
Query: 434 QAKEDGVIPNLVMFKCIIGMCSR 456
G+ P+ M++ II R
Sbjct: 765 WMSGAGIQPSNQMYRDIISFGER 787
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 123/303 (40%), Gaps = 15/303 (4%)
Query: 36 IRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTF 95
I + + I L + M +K + + C+ K EA + K + + ++
Sbjct: 506 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK-YPEAISYLKEMEDLSIPLT 564
Query: 96 NMLMS--VCASSKDSE--GAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
+ S +CA SK + A + ++ AG + D YT+++ S K E+F
Sbjct: 565 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 624
Query: 152 EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
EM GIEP+ AL+ K GQ + F +MR K + VF + +AC
Sbjct: 625 EMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQ 684
Query: 212 AVDRAFDVLAEMNAEVHPVDPDHITIG---ALMKACANAGQVDRAREVYKMIHKYNIKGT 268
RA D++ M+ P P ++IG ++ +G+V+ +++ I +
Sbjct: 685 EWKRAIDLIQMMD----PYLPS-LSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGIN 739
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
+ Y I + G+W V + M+ G+ P +I F + +E FE L
Sbjct: 740 LKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIE--FEPLI 797
Query: 329 EAK 331
K
Sbjct: 798 RQK 800
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 82/193 (42%), Gaps = 8/193 (4%)
Query: 26 SEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFK 85
+ LH+YN + G+ E L +ME G+ + D + + F
Sbjct: 604 TSMLHAYNASEKWGKACE---LFLEMEANGI-EPDSIACSALMRAFNKGGQPSNVFVLMD 659
Query: 86 LVPNP----TLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG 141
L+ T + F + S C + ++ + A +++++ L ++ KSG
Sbjct: 660 LMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSG 719
Query: 142 KVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFN 201
KV+AM ++F++++ +G+ N+ TY L++ G K M ++P ++
Sbjct: 720 KVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYR 779
Query: 202 ALITACGQSGAVD 214
+I+ +S ++
Sbjct: 780 DIISFGERSAGIE 792
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 180/395 (45%), Gaps = 9/395 (2%)
Query: 77 IKEAFRFFKLVPN-----PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYT 131
+++A + F ++ P ++++L+ E AF + + E G + + YT
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305
Query: 132 TLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSK 191
LI G +D F +F EM+ G +PNVHTY LIDG + G++ +A G M
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 192 NVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVD 251
+ P + +NALI + G V AF++L M E P+ T LM+ G+
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVM--EKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 252 RAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALI 311
+A + K + + Y + I+ + G A + M + PD + +A+I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 312 DFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLK 371
+ GK + A L +GIS+ ++ ++L+ + AL + E + +++
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 372 PTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLML 431
T ++N ++ L G ++ + + +L + LGL P+ +TY+ L+ R D+ +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 432 LSQAKEDGVIPNLVMFKCII-GMCS-RRYEKARTL 464
L K G +PN+ + II G+C R E+A L
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 172/394 (43%), Gaps = 11/394 (2%)
Query: 31 SYNRLIRQ----GRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFF-K 85
SY+ LI GR+ E L + M KG + Y +C + I +AF F +
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC-DRGLIDKAFNLFDE 326
Query: 86 LVP---NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGK 142
++P P + T+ +L+ E A V R + + + Y LI K G+
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 202
V FE+ M +PNV T+ L++G + G+ KA M + PD V +N
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 203 LITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHK 262
LI + G ++ A+ +L+ MN ++PD +T A++ A G+ D A ++ +
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNC--FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 263 YNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEA 322
I T I+ + G A + + + K ++ L+ ++D KV+
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 323 AFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALIT 382
+L + G+ +++Y++L+ + + + + E MK P V +I
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
Query: 383 ALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILL 416
LC ++ + ++LS M+ G+ PN +TY++++
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 168/394 (42%), Gaps = 9/394 (2%)
Query: 30 HSYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFK 85
+Y LI+ +G I + +L ++M +G Y +C+ K + K
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 86 LVPN---PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGK 142
+V + P++ T+N L++ AF++L ++++ K + + + L+ + GK
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 202
+ M++ G+ P++ +Y LIDG + G + A+ M +++PD + F A
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 203 LITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHK 262
+I A + G D A L M + + D +T L+ G+ A + + + K
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRK--GISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Query: 263 YNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEA 322
I TP + ++ S+ + ++ + K G++P V + L+D +G +
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 323 AFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALIT 382
+F IL+ K G + Y+ ++ ++A +L M+ + P T ++
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 383 ALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILL 416
+ +L + +E + M G N YS LL
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 149/329 (45%), Gaps = 12/329 (3%)
Query: 111 AFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALID 170
A+ R ++ G Y T++ K+G +A +++ G + H +L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 171 GCAKAGQVAKAFGAYGIMRSKNVK--PDRVVFNALITACGQSGAVDRAFDVLAEMNAEVH 228
G + + A + +M SK V P+ V ++ LI + G ++ AF + +M +
Sbjct: 239 GFCRGLNLRDALKVFDVM-SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK-- 295
Query: 229 PVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFA 288
P T L+KA + G +D+A ++ + K YT+ I+ + G E A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 289 CSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLM-G 347
V M K + P + +ALI+ G+V AFE+L + + + +++ LM G
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 348 ACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCP 407
C K + KA+ L + M L P + + N LI LC + ++LS M + P
Sbjct: 416 LCRVGKPY-KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP 474
Query: 408 NTITYSILLVA-CER-KDDVE---VGLML 431
+ +T++ ++ A C++ K DV +GLML
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLML 503
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 30 HSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFK 85
HS N ++ + ++ E + +L + + GL+ Y + +S I +FR +
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD-ITGSFRILE 605
Query: 86 LVPN----PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG 141
L+ P + + ++++ E A ++L +Q++G+ + YT ++ +G
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Query: 142 KVDAMFEVFHEMVNAGIEPNVHTYGALIDG 171
K+D E MV G E N Y +L+ G
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLQG 695
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 159/349 (45%), Gaps = 5/349 (1%)
Query: 92 LSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
L T N+LM+ S A L + + G + D +T+LI +++ + +
Sbjct: 107 LYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN 166
Query: 152 EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
+MV GI+P+V Y +ID K G V A + M + ++PD V++ +L+ SG
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 212 AVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEV 271
A +L M + PD IT AL+ A G+ A E+Y + + +I
Sbjct: 227 RWRDADSLLRGMTKR--KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 272 YTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAK 331
YT IN G + A ++ M KG PD V ++LI+ KV+ A +I E
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 332 NQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLP 391
+G++ I+Y++L+ A E++ HM S + P + T N L+ LC ++
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 392 KTMEVLSDMKSL---GLCPNTITYSILLVACERKDDVEVGLMLLSQAKE 437
K + + DM+ G+ PN TY++LL +E LM+ ++
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 187/412 (45%), Gaps = 50/412 (12%)
Query: 73 SQKAIKEAF--RFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLY 130
SQ + +F + KL P + TF L++ E A ++ + E G+K D +Y
Sbjct: 121 SQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMY 180
Query: 131 TTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRS 190
TT+I + K+G V+ +F +M N GI P+V Y +L++G +G+ A M
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240
Query: 191 KNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQV 250
+ +KPD + FNALI A + G A ++ EM + P+ T +L+ G V
Sbjct: 241 RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR--MSIAPNIFTYTSLINGFCMEGCV 298
Query: 251 DRAREVYKMIHKYNIKGT-PEV--YTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFL 307
D AR+++ ++ KG P+V YT IN + + A ++ +M++KG+ + +
Sbjct: 299 DEARQMFYLMET---KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 308 SALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGA-CSNAKNWQKALELYEHMK 366
+ LI G GK A E+ ++G+ I +Y+ L+ C N K +KAL ++E M+
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK-VKKALMIFEDMQ 414
Query: 367 SIKLK---PTVSTMNALITALCDGDQLPKTMEVLSDMK---------------------- 401
++ P + T N L+ LC +L K + V DM+
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG 474
Query: 402 -------------SLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGV 440
S G+ PN +TY+ ++ R+ +L + KEDGV
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 2/322 (0%)
Query: 130 YTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMR 189
+T L+ AK K D + + + G+ +++T L++ ++ Q A G M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 190 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQ 249
+PD V F +LI ++ A ++ +M E+ + PD + ++ + G
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM-VEM-GIKPDVVMYTTIIDSLCKNGH 192
Query: 250 VDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSA 309
V+ A ++ + Y I+ +YT +N +G W A S+ MTK+ + PD + +A
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 310 LIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIK 369
LID GK A E+ E I+ I +Y+SL+ +A +++ M++
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 370 LKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGL 429
P V +LI C ++ M++ +M GL NTITY+ L+ + V
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 430 MLLSQAKEDGVIPNLVMFKCII 451
+ S GV PN+ + ++
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLL 394
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 144/336 (42%), Gaps = 17/336 (5%)
Query: 18 HANYAHDVSEQLHSY-------------NRLIRQGRISECIDLLEDMERKGLLDMDKVYH 64
H NYA + +Q+ +Y N L GR + LL M ++ + ++
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 65 ARFFNVCKSQKAI--KEAF-RFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEA 121
A K K + +E + ++ P + T+ L++ + A Q+ L++
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 122 GLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKA 181
G D YT+LI K KVD ++F+EM G+ N TY LI G + G+ A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 182 FGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNA-EVHPVDPDHITIGAL 240
+ M S+ V P+ +N L+ +G V +A + +M E+ V P+ T L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 241 MKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGV 300
+ G++++A V++ + K + YTI I + G + A +++ + KGV
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491
Query: 301 IPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGIS 336
P+ V + +I G A + ++ K G+S
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 192/430 (44%), Gaps = 15/430 (3%)
Query: 18 HANYAHDVSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKS 73
H +H ++ + + Y+ I ++G + + L + M GL+ + Y + C+
Sbjct: 336 HEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR- 394
Query: 74 QKAIKEAFRFF------KLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADC 127
+K +++ + +V +P T+ ++ SS D +GA+ +++ + +G + +
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPY--TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 128 KLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGI 187
+YTTLI T ++ + V EM GI P++ Y +LI G +KA ++ +A
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 188 MRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANA 247
M +KP+ + A I+ ++ A + EM V P+ + L+
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE--CGVLPNKVLCTGLINEYCKK 570
Query: 248 GQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFL 307
G+V A Y+ + I G + YT+ +N + + A ++ +M KG+ PD
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 308 SALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKS 367
LI+ G ++ A I E +G++ +I Y+ L+G + +KA EL + M
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 368 IKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEV 427
L P T +I C L + + +MK GL P++ Y+ L+ C R +DVE
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 428 GLMLLSQAKE 437
+ + K+
Sbjct: 751 AITIFGTNKK 760
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 164/375 (43%), Gaps = 2/375 (0%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P + L+ K+ +++L +++ + Y T++ SG +D + +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
EM+ +G PNV Y LI + + A M+ + + PD +N+LI +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTP 269
+ +D A L EM + + P+ T GA + A + A + K + + +
Sbjct: 500 AKRMDEARSFLVEMVE--NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 270 EVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQE 329
+ T IN + G ACS Y M +G++ D + L++ KV+ A EI +E
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389
+ +GI+ + SY L+ S N QKA +++ M L P V N L+ C +
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 449
+ K E+L +M GL PN +TY ++ + D+ L + K G++P+ ++
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 450 IIGMCSRRYEKARTL 464
++ C R + R +
Sbjct: 738 LVDGCCRLNDVERAI 752
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 197/427 (46%), Gaps = 26/427 (6%)
Query: 25 VSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQ------ 74
++ + YN LI + R+ E L +M GL Y A ++
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 75 KAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLI 134
K +KE R ++PN L T ++ C K E A R + + G+ D K YT L+
Sbjct: 543 KYVKE-MRECGVLPNKVLCT-GLINEYCKKGKVIE-ACSAYRSMVDQGILGDAKTYTVLM 599
Query: 135 TTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVK 194
K+ KVD E+F EM GI P+V +YG LI+G +K G + KA + M + +
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 195 PDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAR 254
P+ +++N L+ +SG +++A ++L EM+ V + P+ +T ++ +G +
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMS--VKGLHPNAVTYCTIIDGYCKSGDL---A 714
Query: 255 EVYKMIHKYNIKG-TPE--VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALI 311
E +++ + +KG P+ VYT ++ C + D E A +++ KKG +ALI
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALI 773
Query: 312 DFAGHAGKVEAAFEILQEAKNQGISV----GIISYSSLMGACSNAKNWQKALELYEHMKS 367
++ GK E E+L + ++Y+ ++ N + A EL+ M++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 368 IKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEV 427
L PTV T +L+ + + V + + G+ P+ I YS+++ A ++
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 428 GLMLLSQ 434
L+L+ Q
Sbjct: 894 ALVLVDQ 900
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 200/470 (42%), Gaps = 49/470 (10%)
Query: 28 QLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRF 83
Q +Y LI R+ + + +LL +M+++ ++ Y +C S + A+
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD-LDGAYNI 439
Query: 84 FKLVP----NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAK 139
K + P + + L+ + A +VL+ ++E G+ D Y +LI +K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 140 SGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVV 199
+ ++D EMV G++PN TYGA I G +A + A A MR V P++V+
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 200 FNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKM 259
LI + G V A M + + D T LM +VD A E+++
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQ--GILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 260 IHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGK 319
+ I Y + IN S+ G+ + A S++D+M ++G+ P+ + + L+ +G+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 320 VEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNA 379
+E A E+L E +G+ ++Y +++ + + +A L++ MK L P
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 380 LITALCDGDQLPKTMEVL--------------------------SDMKSLGLC------- 406
L+ C + + + + + +++K+ L
Sbjct: 738 LVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 407 -----PNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
PN +TY+I++ ++ ++E L Q + ++P ++ + ++
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 190/483 (39%), Gaps = 31/483 (6%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P T+++L+ K E A +L + G+ D Y+ LI K DA +
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
HEMV+ GI + Y I +K G + KA + M + + P + +LI +
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTP 269
V + +++L EM + P T G ++K ++G +D A + K + +
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 270 EVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQE 329
+YT I Q + A V +M ++G+ PD ++LI A +++ A L E
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389
G+ +Y + + A + A + + M+ + P LI C +
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 449
+ + M G+ + TY++L+ + D V+ + + + G+ P++ +
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 450 IIGMCSR--RYEKARTLNEHVLSFNSGRPQIENKWTSLALMVYREAIVAGTIPTVEVVSK 507
+I S+ +KA + ++ E + G P V + +
Sbjct: 633 LINGFSKLGNMQKASS-------------------------IFDEMVEEGLTPNVIIYNM 667
Query: 508 VLGCLQLPYNADIRERLVENLGVSADALKRSNLCSLIDGFGEYD--PRAFSLLEEAASFG 565
+LG + + L++ + V C++IDG+ + AF L +E G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 566 IVP 568
+VP
Sbjct: 728 LVP 730
Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 148/348 (42%), Gaps = 30/348 (8%)
Query: 127 CKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVA------- 179
CK+ L+ + ++D ++V+ MV + +V TY LI +AG V
Sbjct: 189 CKV---LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLF 245
Query: 180 ---KAF--------GAYGIMRS---KNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNA 225
K F GA + S K + P + ++ LI + ++ A +L EM++
Sbjct: 246 KTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS 305
Query: 226 EVHPVDPDHITIGALMKACANAGQVDRARE-VYKMI-HKYNIKGTPEVYTIAINCCSQTG 283
V D+ T L+ D A+ V++M+ H NIK P +Y I S+ G
Sbjct: 306 --LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK--PYMYDCCICVMSKEG 361
Query: 284 DWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYS 343
E A +++D M G+IP ++LI+ V +E+L E K + I + +Y
Sbjct: 362 VMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYG 421
Query: 344 SLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSL 403
+++ ++ + A + + M + +P V LI + M VL +MK
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 404 GLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
G+ P+ Y+ L++ + ++ L + E+G+ PN + I
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 37 RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLST-- 94
+ G ++E L ++M+ KGL+ D + + C ++ A F S+
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVP-DSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA 767
Query: 95 -FNMLMSVCASSKDSEGAFQVLRLVQEAGL----KADCKLYTTLITTCAKSGKVDAMFEV 149
FN L++ +E +VL + + K + Y +I K G ++A E+
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
FH+M NA + P V TY +L++G K G+ A+ F + + ++PD ++++ +I A +
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIG---ALMKACANAGQVDRAREV 256
G +A ++ +M A+ D ++I AL+ A G+++ A +V
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
Query: 291 VYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACS 350
VY M ++ V+ D LI AG V+ ++L + + + + +
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL----------- 256
Query: 351 NAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTI 410
N AL+L E M L P T + LI LC +L +L +M SLG+ +
Sbjct: 257 ---NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH 313
Query: 411 TYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSRR--YEKARTLNEHV 468
TYS+L+ + + + L+ + G+ M+ C I + S+ EKA+ L + +
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 469 LS 470
++
Sbjct: 374 IA 375
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 182/421 (43%), Gaps = 44/421 (10%)
Query: 47 LLEDMERKGLLDMDKVYHARFFNVCKSQK---AIKEAFRFFKLVPNPTLSTFNMLMS-VC 102
L + ME KG+ C+ +K A + KL P FN L++ +C
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 103 ASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNV 162
+ SE V R+V E G K TL+ +GKV + MV G +PN
Sbjct: 170 LECRVSEALELVDRMV-EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Query: 163 HTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAE 222
TYG +++ K+GQ A A M +N+K D V ++ +I + G++D AF++ E
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 223 MNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQT 282
M E+ D IT L+ NAG+
Sbjct: 289 M--EIKGFKADIITYNTLIGGFCNAGR--------------------------------- 313
Query: 283 GDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISY 342
W+ + DM K+ + P+ V S LID GK+ A ++L+E +GI+ I+Y
Sbjct: 314 --WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 343 SSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKS 402
+SL+ ++A+++ + M S P + T N LI C +++ +E+ +M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 403 LGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSR-RYEK 460
G+ NT+TY+ L+ + +EV L + V P++V +K ++ G+C EK
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 461 A 461
A
Sbjct: 492 A 492
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 182/426 (42%), Gaps = 5/426 (1%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKS-QKAIKEAFRFFKLVPNPT 91
N L G++S+ + L++ M G + Y +CKS Q A+ N
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 92 LSTFNMLMSVCASSKDS--EGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
L + + KD + AF + ++ G KAD Y TLI +G+ D ++
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
+M+ I PNV T+ LID K G++ +A M + + P+ + +N+LI +
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTP 269
++ A ++ M ++ DPD +T L+ A ++D E+++ + +
Sbjct: 381 ENRLEEAIQMVDLMISK--GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 270 EVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQE 329
Y + Q+G E A ++ +M + V PD V L+D G++E A EI +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389
+ + + I Y ++ NA A +L+ + +K N +I+ LC D
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 449
L K + M G P+ +TY+IL+ A DD L+ + K G ++ K
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618
Query: 450 IIGMCS 455
+I M S
Sbjct: 619 VINMLS 624
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 185/393 (47%), Gaps = 5/393 (1%)
Query: 88 PNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMF 147
P PT+ FN L S A +K E + + ++ G+ + +I + K+ F
Sbjct: 84 PLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAF 143
Query: 148 EVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 207
+++ G EP+ + L++G +V++A M KP + N L+
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL 203
Query: 208 GQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKG 267
+G V A VL + E P+ +T G ++ +GQ A E+ + + + NIK
Sbjct: 204 CLNGKVSDAV-VLIDRMVETG-FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 268 TPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEIL 327
Y+I I+ + G + A +++++M KG D + + LI +AG+ + ++L
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 328 QEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDG 387
++ + IS ++++S L+ + ++A +L + M + P T N+LI C
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 388 DQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMF 447
++L + ++++ M S G P+ +T++IL+ + + ++ GL L + GVI N V +
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 448 KCII-GMC-SRRYEKARTLNEHVLSFNSGRPQI 478
++ G C S + E A+ L + ++S RP I
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVS-RRVRPDI 473
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 145/349 (41%), Gaps = 38/349 (10%)
Query: 142 KVDAMFEVFHEMVNA-----------------------------------GIEPNVHTYG 166
K D ++F +M+ + GI +++T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 167 ALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAE 226
+I+ + +++ AF G + +PD V+FN L+ V A +++ M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 227 VHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWE 286
H P IT+ L+ G+V A + + + + Y +N ++G
Sbjct: 188 GHK--PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 287 FACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLM 346
A + M ++ + D V S +ID G ++ AF + E + +G II+Y++L+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 347 GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLC 406
G NA W +L M K+ P V T + LI + +L + ++L +M G+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 407 PNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMC 454
PNTITY+ L+ +++ +E + ++ G P+++ F +I G C
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 165/375 (44%), Gaps = 13/375 (3%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHAR---FFNVCKSQKAIKEAFRFFKLVPNPT 91
L + G + +L +ME KG Y+ F N + K K +P
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 92 LSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
+ TF++L+ A Q+L+ + + G+ + Y +LI K +++ ++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 152 EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSG 211
M++ G +P++ T+ LI+G KA ++ + M + V + V +N L+ QSG
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 212 AVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEV 271
++ A + EM + V PD ++ L+ + G++++A E++ I K ++ +
Sbjct: 453 KLEVAKKLFQEMVS--RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 272 YTIAIN--CCSQTGD--WEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEIL 327
Y I I+ C + D W+ CS + KGV D + +I + A +
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCS----LPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 328 QEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDG 387
++ +G + ++Y+ L+ A + A EL E MKS VST+ +I L G
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Query: 388 DQLPKTMEVLSDMKS 402
+ +++LS ++
Sbjct: 627 ELDKSFLDMLSTTRA 641
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 170/380 (44%), Gaps = 4/380 (1%)
Query: 91 TLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVF 150
L T+++L++ A VL + + G + D +L+ ++ +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 151 HEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQS 210
+MV G +P+ T+ LI G + + ++A M K +PD V + ++ +
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 211 GAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPE 270
G +D A +L +M E ++P + ++ A N V+ A ++ + I+
Sbjct: 235 GDIDLALSLLKKM--EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 271 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330
Y I C G W A + DM ++ + P+ V SALID GK+ A ++ E
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 331 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQL 390
+ I I +YSSL+ +A ++E M S P V T N LI C ++
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 391 PKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCI 450
+ ME+ +M GL NT+TY+ L+ + + + ++ Q DGV+P+++ + +
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 451 I-GMCSR-RYEKARTLNEHV 468
+ G+C+ + E A + E++
Sbjct: 473 LDGLCNNGKVETALVVFEYL 492
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 201/446 (45%), Gaps = 9/446 (2%)
Query: 21 YAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGL----LDMDKVYHARFFNVCKSQKA 76
Y D+ N RIS+ + L+ M G + + H F ++ +A
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG-LFRHNRASEA 205
Query: 77 IKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITT 136
+ R P L T+ ++++ D + A +L+ +++ ++ +Y T+I
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 137 CAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPD 196
V+ +F EM N GI PNV TY +LI G+ + A M + + P+
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 197 RVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREV 256
V F+ALI A + G + A + EM +DPD T +L+ ++D A+ +
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 257 YKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGH 316
++++ + Y I + + ++ +M+++G++ + V + LI
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 317 AGKVEAAFEILQEAKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVS 375
A + + A + ++ + G+ I++YS L+ G C+N K + AL ++E+++ K++P +
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK-VETALVVFEYLQRSKMEPDIY 502
Query: 376 TMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQA 435
T N +I +C ++ ++ + G+ PN +TY+ ++ RK E L +
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 436 KEDGVIPNLVMFKCIIGMCSRRYEKA 461
KE+G +P+ + +I R +KA
Sbjct: 563 KEEGPLPDSGTYNTLIRAHLRDGDKA 588
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 197/442 (44%), Gaps = 14/442 (3%)
Query: 25 VSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFN-VCKSQK---A 76
+S L++Y+ LI R+ ++S + +L M + G + D V N C + A
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGY-EPDIVTLNSLLNGFCHGNRISDA 170
Query: 77 IKEAFRFFKLVPNPTLSTFNMLM-SVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLIT 135
+ + ++ P TFN L+ + ++ SE V R+V + G + D Y ++
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVN 229
Query: 136 TCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKP 195
K G +D + +M IEP V Y +ID V A + M +K ++P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 196 DRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRARE 255
+ V +N+LI G A +L++M ++P+ +T AL+ A G++ A +
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 256 VYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAG 315
+Y + K +I Y+ IN + A +++ M K P+ V + LI
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 316 HAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVS 375
A +V+ E+ +E +G+ ++Y++L+ A+ A +++ M S + P +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 376 TMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQA 435
T + L+ LC+ ++ + V ++ + P+ TY+I++ + VE G L
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 436 KEDGVIPNLVMFKCII-GMCSR 456
GV PN+V + ++ G C +
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRK 549
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 176/375 (46%), Gaps = 9/375 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN--- 89
N L ++G I + LL+ ME +G ++ V + + + K + +A F + N
Sbjct: 229 NGLCKRGDIDLALSLLKKME-QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 90 -PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P + T+N L+ + A ++L + E + + ++ LI K GK+ +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
++ EM+ I+P++ TY +LI+G ++ +A + +M SK+ P+ V +N LI
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
++ VD ++ EM+ + + +T L+ A + D A+ V+K + +
Sbjct: 408 KAKRVDEGMELFREMSQ--RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y+I ++ G E A V++ + + + PD + +I+ AGKVE +++
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA-LCDG 387
+G+ +++Y+++M ++A L+ MK P T N LI A L DG
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 388 DQLPKTMEVLSDMKS 402
D+ + E++ +M+S
Sbjct: 586 DK-AASAELIREMRS 599
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 7/202 (3%)
Query: 31 SYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKL 86
+YN LI+ R+ E ++L +M ++GL+ Y ++++ F ++
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 87 VPN---PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKV 143
V + P + T+++L+ ++ E A V +Q + ++ D Y +I K+GKV
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 144 DAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNAL 203
+ +++F + G++PNV TY ++ G + G +A + M+ + PD +N L
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 204 ITACGQSGAVDRAFDVLAEMNA 225
I A + G + +++ EM +
Sbjct: 578 IRAHLRDGDKAASAELIREMRS 599
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 210/484 (43%), Gaps = 34/484 (7%)
Query: 18 HANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHAR----------- 66
++++A + E + +++R G + E LE+M VYH
Sbjct: 95 NSSFALEDVESNNHLRQMVRTGELEEGFKFLENM----------VYHGNVPDIIPCTTLI 144
Query: 67 --FFNVCKSQKAIK--EAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAG 122
F + K++KA K E VP+ + T+N+++S + + A VL
Sbjct: 145 RGFCRLGKTRKAAKILEILEGSGAVPD--VITYNVMISGYCKAGEINNALSVL---DRMS 199
Query: 123 LKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAF 182
+ D Y T++ + SGK+ EV M+ P+V TY LI+ + V A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 183 GAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMK 242
MR + PD V +N L+ + G +D A L +M + P+ IT +++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS--GCQPNVITHNIILR 317
Query: 243 ACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIP 302
+ + G+ A ++ + + + + I IN + G A + + M + G P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 303 DEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELY 362
+ + + L+ K++ A E L+ ++G I++Y++++ A + A+E+
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 363 EHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERK 422
+ S P + T N +I L + K +++L +M++ L P+TITYS L+ R+
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 423 DDVEVGLMLLSQAKEDGVIPNLVMFKCI-IGMCSRRYEKARTLNEHVLSFNSGRPQIENK 481
V+ + + + G+ PN V F I +G+C R + R ++ V N G E
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR-QTDRAIDFLVFMINRGCKPNETS 556
Query: 482 WTSL 485
+T L
Sbjct: 557 YTIL 560
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 197/419 (47%), Gaps = 10/419 (2%)
Query: 37 RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFN 96
R G+ + +LE +E G + Y+ CK+ + ++ +P + T+N
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYN 208
Query: 97 -MLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLI-TTCAKSGKVDAMFEVFHEMV 154
+L S+C S K + A +VL + + D YT LI TC SG AM ++ EM
Sbjct: 209 TILRSLCDSGKLKQ-AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM-KLLDEMR 266
Query: 155 NAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVD 214
+ G P+V TY L++G K G++ +A M S +P+ + N ++ + +G
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 215 RAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTI 274
A +LA+M + P +T L+ G + RA ++ + + ++ + Y
Sbjct: 327 DAEKLLADMLRK--GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 275 AINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQG 334
++ + + A + M +G PD V + ++ GKVE A EIL + ++G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 335 ISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTM 394
S +I+Y++++ + A KA++L + M++ LKP T ++L+ L ++ + +
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 395 EVLSDMKSLGLCPNTITY-SILLVACE-RKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
+ + + +G+ PN +T+ SI+L C+ R+ D + ++ + G PN + +I
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR--GCKPNETSYTILI 561
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 11/279 (3%)
Query: 31 SYNRLIRQ----GRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKL 86
++N ++R GR + LL DM RKG ++ +C+ + + A +
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR-KGLLGRAIDILEK 369
Query: 87 VPN----PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGK 142
+P P ++N L+ K + A + L + G D Y T++T K GK
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 202
V+ E+ +++ + G P + TY +IDG AKAG+ KA MR+K++KPD + +++
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 203 LITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHK 262
L+ + G VD A E E + P+ +T ++M + Q DRA + +
Sbjct: 490 LVGGLSREGKVDEAIKFFHEF--ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 263 YNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVI 301
K YTI I + G + A + +++ KG++
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 166/368 (45%), Gaps = 40/368 (10%)
Query: 92 LSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVF 150
+ TFN+L++ C K + + R+V E + D Y T++ +K G++ + E+
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 151 HEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQS 210
+M G+ PN TY L+ G K G + +AF +M+ NV PD +N LI +
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 211 GAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKG--- 267
G++ +++ M + + PD +T L+ C G AR++ + + +K
Sbjct: 324 GSMREGLELMDAMKS--LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQV 381
Query: 268 -------------------------------TPEV--YTIAINCCSQTGDWEFACSVYDD 294
+P++ Y I + GD A + +
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 295 MTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKN 354
M +KG+ + + L+ ++D K++ A +L A +G V ++Y +L+ +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 355 WQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITY-S 413
+KALE+++ MK +K+ PTVST N+LI LC + ME ++ GL P+ T+ S
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 414 ILLVACER 421
I+L C+
Sbjct: 562 IILGYCKE 569
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 190/428 (44%), Gaps = 50/428 (11%)
Query: 31 SYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKL 86
+YN +++ +GR+S+ +LL DM++ GL+ Y+ + CK ++KEAF+ +L
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCK-LGSLKEAFQIVEL 300
Query: 87 VPN----PTLSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG 141
+ P L T+N+L++ +C + EG +++ ++ L+ D Y TLI C + G
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREG-LELMDAMKSLKLQPDVVTYNTLIDGCFELG 359
Query: 142 -----------------------------------KVDAMFEVFHEMVNA-GIEPNVHTY 165
K +A+ E+V+ G P++ TY
Sbjct: 360 LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 166 GALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNA 225
LI K G ++ A M K +K + + N ++ A + +D A ++L +
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Query: 226 EVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDW 285
VD +T G L+ +V++A E++ + K I T + I G
Sbjct: 480 RGFIVD--EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 286 EFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSL 345
E A +D++ + G++PD+ +++I G+VE AFE E+ + + L
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 346 MGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGL 405
+ +KAL + + + TV T N +I+A C +L + ++LS+M+ GL
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 406 CPNTITYS 413
P+ TY+
Sbjct: 657 EPDRFTYN 664
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 168/407 (41%), Gaps = 42/407 (10%)
Query: 86 LVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAK---SGK 142
L P P+ + F++ +S A Q+ + + LK + TL+ + S
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSK-NVKPDRVVFN 201
+ + EVF +MV G+ NV T+ L++G G++ A G M S+ V PD V +N
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 202 ALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIH 261
++ A + G + ++L +M + + P+ +T L+ G + A ++ +++
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKK--NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302
Query: 262 KYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVE 321
+ N+ Y I IN G + D M + PD V + LID G
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSL 362
Query: 322 AAFEILQEAKNQGI------------------------------------SVGIISYSSL 345
A +++++ +N G+ S I++Y +L
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 346 MGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGL 405
+ A + ALE+ M +K T+N ++ ALC +L + +L+ G
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 406 CPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIG 452
+ +TY L++ R++ VE L + + K+ + P + F +IG
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 5/237 (2%)
Query: 94 TFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEM 153
T N ++ + + A +L + G D Y TLI + KV+ E++ EM
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 154 VNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAV 213
I P V T+ +LI G G+ A + + + PD FN++I + G V
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 214 DRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYK-MIHKYNIKGTPEVY 272
++AF+ E + H PD+ T L+ G ++A + +I + + Y
Sbjct: 573 EKAFEFYNE--SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV--TY 628
Query: 273 TIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQE 329
I+ + + A + +M +KG+ PD ++ I GK+ E+L++
Sbjct: 629 NTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 39/237 (16%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHAR----FFNVCKSQKAIKEAFRFFKLVPNP 90
L ++ ++ E +LL ++G + +D+V + FF K +KA++ K+ P
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFI-VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
Query: 91 TLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVF 150
T+STFN L+ +E A + + E+GL D + ++I K G+V+ FE +
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFY 579
Query: 151 HEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFG--------------------------- 183
+E + +P+ +T L++G K G KA
Sbjct: 580 NESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDK 639
Query: 184 ----AYGI---MRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPD 233
AY + M K ++PDR +N+ I+ + G + ++L + + + + D
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRD 696
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 25 VSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEA 80
++ + ++N LI G+ ++ +++ GLL D +++ CK + +++A
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR-VEKA 575
Query: 81 FRFF----KLVPNPTLSTFNMLMSVCASSKDSEGAFQVLR-LVQEAGLKADCKLYTTLIT 135
F F+ K P T N+L++ +E A L++E + D Y T+I+
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER--EVDTVTYNTMIS 633
Query: 136 TCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALI-----DG-CAKAGQVAKAF-GAYGIM 188
K K+ +++ EM G+EP+ TY + I DG ++ ++ K F G +G M
Sbjct: 634 AFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSM 693
Query: 189 R 189
+
Sbjct: 694 K 694
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 202/438 (46%), Gaps = 10/438 (2%)
Query: 24 DVSEQLHSYNRLIRQGRISECIDLLEDMERK----GLLDMDKVYHARFFNVCKSQKAIKE 79
D+ E+L S RL R ++++ IDL DM + ++D +++ A + K I
Sbjct: 51 DLRERL-SKTRL-RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSA-IVKLKKYDVVISL 107
Query: 80 AFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAK 139
+ L L TFN++++ A +L + + G + D +L+ +
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 140 SGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVV 199
+V + +MV G +P++ Y A+ID K +V AF + + K ++P+ V
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
Query: 200 FNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKM 259
+ AL+ S A +L++M + + P+ IT AL+ A G+V A+E+++
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 260 IHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGK 319
+ + +I Y+ IN + A ++D M KG + D V + LI+ A +
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 320 VEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNA 379
VE ++ +E +G+ ++Y++L+ A + KA E + M + P + T N
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 380 LITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDG 439
L+ LCD +L K + + DM+ + + +TY+ ++ + VE L G
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 440 VIPNLVMFKCII-GMCSR 456
+ P++V + ++ G+C++
Sbjct: 466 LKPDIVTYTTMMSGLCTK 483
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 198/434 (45%), Gaps = 12/434 (2%)
Query: 12 PYPNGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVC 71
P+P+ N +L Y+ +I G+ E + + R L + V + F C
Sbjct: 81 PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGI-----RNDLYTFNIVINC--FCCC 133
Query: 72 -KSQKAIKEAFRFFKLVPNPTLSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKL 129
+ A+ + KL P T L++ C ++ S+ V ++V E G K D
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-EIGYKPDIVA 192
Query: 130 YTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMR 189
Y +I + K+ +V+ F+ F E+ GI PNV TY AL++G + + + A M
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 190 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQ 249
K + P+ + ++AL+ A ++G V A ++ EM +DPD +T +L+ +
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR--MSIDPDIVTYSSLINGLCLHDR 310
Query: 250 VDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSA 309
+D A +++ ++ Y IN + E ++ +M+++G++ + V +
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 310 LIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIK 369
LI AG V+ A E + GIS I +Y+ L+G + +KAL ++E M+ +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 370 LKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGL 429
+ + T +I +C ++ + + + GL P+ +TY+ ++ K +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 430 MLLSQAKEDGVIPN 443
L ++ K++G++ N
Sbjct: 491 ALYTKMKQEGLMKN 504
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 154/341 (45%), Gaps = 4/341 (1%)
Query: 130 YTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMR 189
+ L++ K K D + + +M GI +++T+ +I+ QV+ A G M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 190 SKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQ 249
+PDRV +L+ + V A ++ +M E+ PD + A++ + +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM-VEIG-YKPDIVAYNAIIDSLCKTKR 205
Query: 250 VDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSA 309
V+ A + +K I + I+ YT +N + W A + DM KK + P+ + SA
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 310 LIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIK 369
L+D GKV A E+ +E I I++YSSL+ +A ++++ M S
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 370 LKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGL 429
V + N LI C ++ M++ +M GL NT+TY+ L+ + DV+
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 430 MLLSQAKEDGVIPNLVMFKCII-GMCSR-RYEKARTLNEHV 468
SQ G+ P++ + ++ G+C EKA + E +
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 182/387 (47%), Gaps = 46/387 (11%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN--- 89
N R+ R+S+ + L++ M G Y+A ++CK+++ + +AF FFK +
Sbjct: 163 NGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR-VNDAFDFFKEIERKGI 221
Query: 90 -PTLSTFNMLMS-VCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMF 147
P + T+ L++ +C SS+ S+ A ++L + + + + Y+ L+ K+GKV
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAA-RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 148 EVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITAC 207
E+F EMV I+P++ TY +LI+G ++ +A + +M SK D V +N LI
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 208 GQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKG 267
++ V+ + EM+ + + +T L++ AG VD+A+E + + + I
Sbjct: 341 CKAKRVEDGMKLFREMSQ--RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI-- 396
Query: 268 TPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEIL 327
+P+++T I L L D G++E A I
Sbjct: 397 SPDIWTYNI-----------------------------LLGGLCD----NGELEKALVIF 423
Query: 328 QEAKNQGISVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCD 386
++ + + + + I++Y++++ G C K ++A L+ + LKP + T +++ LC
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGK-VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 387 GDQLPKTMEVLSDMKSLGLCPNTITYS 413
L + + + MK GL N T S
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLS 509
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 201/427 (47%), Gaps = 12/427 (2%)
Query: 40 RISECIDLLEDMERKGL----LDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTF 95
RIS+ + L++ M G + H F + K+ +A+ + + P L T+
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH-NKASEAVALVDQMVQRGCQPDLVTY 226
Query: 96 NMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVN 155
+++ D + A +L ++ A +KA+ ++ T+I + K V+ ++F EM
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 156 AGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDR 215
GI PNV TY +LI+ G+ + A M K + P+ V FNALI A + G +
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 216 AFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIA 275
A + EM +DPD IT L+ ++D A++++K + + + Y
Sbjct: 347 AEKLHEEMIQ--RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTL 404
Query: 276 INCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGI 335
IN + E ++ +M+++G++ + V + +I AG ++A + ++ + +
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464
Query: 336 SVGIISYSSLM-GACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTM 394
I++YS L+ G CS K AL ++++++ +++ + N +I +C ++ +
Sbjct: 465 PTDIMTYSILLHGLCSYGK-LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 395 EVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMC 454
++ SL + P+ +TY+ ++ K ++ L + KEDG +PN + +I
Sbjct: 524 DLFC---SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRAN 580
Query: 455 SRRYEKA 461
R ++A
Sbjct: 581 LRDCDRA 587
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 184/433 (42%), Gaps = 47/433 (10%)
Query: 32 YNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFN-VCKSQK---AIKEAFRF 83
+N+L+ + + I L E M+ G+ D ++ F N C+ + A+ +
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGI-SHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 84 FKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKV 143
KL P + T + L++ SK A ++ + E G K D +TTLI K
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 144 DAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNAL 203
+ +MV G +P++ TYG +++G K G + A M + +K + V+FN +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 204 ITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKY 263
I + + V+ A D+ EM E + P+ +T +L
Sbjct: 265 IDSLCKYRHVEVAVDLFTEM--ETKGIRPNVVTYNSL----------------------- 299
Query: 264 NIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAA 323
INC G W A + +M +K + P+ V +ALID GK+ A
Sbjct: 300 ------------INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 324 FEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA 383
++ +E + I I+Y+ L+ +A ++++ M S P + T N LI
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 384 LCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPN 443
C ++ +E+ +M GL NT+TY+ ++ + D + M+ Q + V +
Sbjct: 408 FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 444 LVMFKCII-GMCS 455
++ + ++ G+CS
Sbjct: 468 IMTYSILLHGLCS 480
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 165/394 (41%), Gaps = 2/394 (0%)
Query: 58 DMDKVYHARFFNVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRL 117
D ++ R ++ K A+ K P P++ FN L+S A E +
Sbjct: 49 DYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQ 108
Query: 118 VQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQ 177
+Q G+ D Y+ I + ++ V +M+ G EP++ T +L++G + +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 178 VAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITI 237
++ A M KPD F LI A ++ +M PD +T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ--RGCQPDLVTY 226
Query: 238 GALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTK 297
G ++ G +D A + + IK ++ I+ + E A ++ +M
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 298 KGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQK 357
KG+ P+ V ++LI+ + G+ A +L + I+ ++++++L+ A +
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 358 ALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLV 417
A +L+E M + P T N LI C ++L + ++ M S PN TY+ L+
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 418 ACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
+ VE G+ L + + G++ N V + II
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 136/302 (45%), Gaps = 15/302 (4%)
Query: 31 SYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKL 86
++N LI ++G++ E L E+M ++ + D D + + N + EA + FK
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSI-DPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 87 VPN----PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGK 142
+ + P + T+N L++ K E ++ R + + GL + YTT+I ++G
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 202
D+ VF +MV+ + ++ TY L+ G G++ A + ++ ++ + ++N
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 203 LITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHK 262
+I ++G V A+D+ ++ + PD +T ++ + + A ++++ + +
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLS-----IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 263 YNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEA 322
Y I + D + + +M G + D +S + + H G+++
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDK 622
Query: 323 AF 324
+F
Sbjct: 623 SF 624
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 102/238 (42%), Gaps = 14/238 (5%)
Query: 288 ACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMG 347
A ++ DM K P V + L+ K E + ++ + GIS + +YS +
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 348 ACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCP 407
AL + M + +P + T+++L+ C ++ + ++ M +G P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 408 NTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSR---------- 456
+T T++ L+ + + L+ Q + G P+LV + ++ G+C R
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 457 -RYEKARTLNEHVLSFNSGRPQI-ENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCL 512
+ E AR + +V+ FN+ + + + +A+ ++ E G P V + ++ CL
Sbjct: 247 NKMEAAR-IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 213/497 (42%), Gaps = 77/497 (15%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFF----KLVPNP 90
L ++G+I E ++L++ + G+ VY+A ++CK +K EA F K+ P
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK-FHEAELLFDRMGKIGLRP 400
Query: 91 TLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLK-----------ADCKL---------- 129
T+++L+ + + A L + + GLK CK
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 130 --------------YTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKA 175
YT+L+ GK++ ++HEM GI P+++T+ L+ G +A
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 176 GQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHI 235
G + A + M NVKP+RV +N +I + G + +AF+ L EM + + PD
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK--GIVPDTY 578
Query: 236 TIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDM 295
+ L+ GQ A+ +HK N + YT ++ + G E A SV +M
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 296 TKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNW 355
++GV D V LID + + F +L+E ++G+ + Y+S++ A S ++
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 356 QKALELYEHMKSIKLKPTVSTMNALITALC------DGDQLPKTMEVLS----------- 398
++A +++ M + P T A+I LC + + L M+ +S
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 399 ---------DMKSL---------GLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGV 440
DM+ GL NT TY++L+ R+ +E L+++ DGV
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 441 IPNLVMFKCIIGMCSRR 457
P+ + + +I RR
Sbjct: 819 SPDCITYTTMINELCRR 835
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 198/438 (45%), Gaps = 17/438 (3%)
Query: 28 QLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRF 83
++ YN LI + G IS + +M K L Y + C S+ I +A R
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC-SKGKINKALRL 494
Query: 84 FKLVPN----PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAK 139
+ + P++ TF L+S + A ++ + E +K + Y +I +
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 140 SGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVV 199
G + FE EM GI P+ ++Y LI G GQ ++A + N + + +
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 200 FNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKM 259
+ L+ + G ++ A V EM VD D + G L+ + K
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQ--RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 260 IHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGK 319
+H +K +YT I+ S+TGD++ A ++D M +G +P+EV +A+I+ AG
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 320 VEAAFEILQEAKNQGISV--GIISYSSLMGACSNAK-NWQKALELYEHMKSIKLKPTVST 376
V A E+L +K Q +S ++Y + + + + QKA+EL+ + L T +T
Sbjct: 733 VNEA-EVLC-SKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT-AT 789
Query: 377 MNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAK 436
N LI C ++ + E+++ M G+ P+ ITY+ ++ R++DV+ + L +
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 437 EDGVIPNLVMFKCIIGMC 454
E G+ P+ V + +I C
Sbjct: 850 EKGIRPDRVAYNTLIHGC 867
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 173/397 (43%), Gaps = 10/397 (2%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P + T + L+ + A ++ + G++ D +YT +I + + + E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
M G + N+ Y LIDG K +V +A G + K++KPD V + L+ +
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTP 269
+ +++ EM P + +L++ G+++ A + K + + +
Sbjct: 310 VQEFEIGLEMMDEMLC--LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 270 EVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQE 329
VY I+ + + A ++D M K G+ P++V S LID GK++ A L E
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 330 AKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQ 389
+ G+ + + Y+SL+ + A M + KL+PTV T +L+ C +
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 390 LPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKC 449
+ K + + +M G+ P+ T++ LL R + + L ++ E V PN V +
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 450 II-GMC-----SRRYEKARTLNEH--VLSFNSGRPQI 478
+I G C S+ +E + + E V S RP I
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 173/388 (44%), Gaps = 21/388 (5%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFK------LVP 88
L R G I + + L +M + Y+ C+ + + +AF F K +VP
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE-EGDMSKAFEFLKEMTEKGIVP 575
Query: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKL----YTTLITTCAKSGKVD 144
+ T S ++ +C + + SE ++ + K +C+L YT L+ + GK++
Sbjct: 576 D-TYSYRPLIHGLCLTGQASEA-----KVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 145 AMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALI 204
V EMV G++ ++ YG LIDG K FG M + +KPD V++ ++I
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 205 TACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYN 264
A ++G AF + M E P+ +T A++ AG V+ A + + +
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINE--GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 265 IKGTPEVYTIAINCCSQTG-DWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAA 323
Y ++ ++ D + A +++ + K G++ + + LI G++E A
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEA 806
Query: 324 FEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITA 383
E++ G+S I+Y++++ + +KA+EL+ M ++P N LI
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Query: 384 LCDGDQLPKTMEVLSDMKSLGLCPNTIT 411
C ++ K E+ ++M GL PN T
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLIPNNKT 894
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 166/368 (45%), Gaps = 5/368 (1%)
Query: 95 FNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMV 154
FN+LM+ + A +V + + L+ + TLI K G +D F + H+M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 155 NAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVD 214
+ P+V TY ALI+ K ++ A G + M + + P+ V+F LI ++G +D
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 215 RAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTI 274
+ +M ++ + PD + L+ G + AR + + + ++ YT
Sbjct: 363 LMKESYQKMLSK--GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 275 AINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQG 334
I+ + GD E A + +M + G+ D V SAL+ G+V A L+E G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 335 ISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTM 394
I ++Y+ +M A + Q +L + M+S P+V T N L+ LC Q+
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 395 EVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMC 454
+L M ++G+ P+ ITY+ LL R + + Q E G++ +L +K I+
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYI---QKPEIGIVADLASYKSIVNEL 597
Query: 455 SRRYEKAR 462
R + R
Sbjct: 598 DRASKDHR 605
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 149/338 (44%), Gaps = 38/338 (11%)
Query: 118 VQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQ 177
+ +AG + ++ L+ K G + +VF E+ ++P V ++ LI+G K G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 178 VAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITI 237
+ + F M +PD ++ALI A + +D A + EM + P+ +
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR--GLIPNDVIF 348
Query: 238 GALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTK 297
L+ + G++D +E Y+ + ++ +Y +N + GD A ++ D M +
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408
Query: 298 KGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQK 357
+G+ PD++ + LID G VE A EI +E GI + + +S
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFS-------------- 454
Query: 358 ALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLV 417
AL+ +C ++ L +M G+ P+ +TY++++
Sbjct: 455 ---------------------ALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 418 ACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMC 454
A +K D + G LL + + DG +P++V + ++ G+C
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLC 531
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 153/329 (46%), Gaps = 7/329 (2%)
Query: 33 NRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFF----KLVP 88
N+ ++G IS+ + +++ ++ L ++ CK + E FR K
Sbjct: 248 NKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN-LDEGFRLKHQMEKSRT 306
Query: 89 NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFE 148
P + T++ L++ +GA + + + GL + ++TTLI +++G++D M E
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 149 VFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACG 208
+ +M++ G++P++ Y L++G K G + A M + ++PD++ + LI
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 209 QSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
+ G V+ A ++ EM+ + ++ D + AL+ G+V A + + + IK
Sbjct: 427 RGGDVETALEIRKEMDQ--NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
YT+ ++ + GD + + +M G +P V + L++ G+++ A +L
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQK 357
N G+ I+Y++L+ N K
Sbjct: 545 AMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%)
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
E + G + + ++ LM N A ++++ + L+PTV + N LI C
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
L + + M+ P+ TYS L+ A +++ ++ L + + G+IPN V+F
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 449 CIIGMCSRRYE 459
+I SR E
Sbjct: 350 TLIHGHSRNGE 360
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 31 SYNRLI----RQGRISECIDLLEDMERKGLLDMDKV-YHARFFNVCKSQKAI--KEAFR- 82
+Y LI R G + +++ ++M++ G+ ++D+V + A +CK + I + A R
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGI-ELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 83 FFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGK 142
+ P T+ M+M D++ F++L+ +Q G Y L+ K G+
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAF 182
+ + M+N G+ P+ TY L++G + +K +
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 195/410 (47%), Gaps = 17/410 (4%)
Query: 70 VCKSQKAIKEAFRFFKLVP----NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKA 125
VC+ + IKEA L+ P + +++ +++ + + ++++ +++ GLK
Sbjct: 256 VCQLGR-IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 314
Query: 126 DCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAY 185
+ +Y ++I + K+ E F EM+ GI P+ Y LIDG K G + A +
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 186 GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACA 245
M S+++ PD + + A+I+ Q G + A + EM + ++PD +T L+
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYC 432
Query: 246 NAGQVDRAREVYKMIHKYNIKGTPEV--YTIAINCCSQTGDWEFACSVYDDMTKKGVIPD 303
AG + A V+ H +P V YT I+ + GD + A + +M K G+ P+
Sbjct: 433 KAGHMKDAFRVHN--HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 304 EVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYE 363
+++++ +G +E A +++ E + G++ ++Y++LM A + KA E+ +
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 364 HMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKD 423
M L+PT+ T N L+ C L ++L+ M + G+ PN T++ L+ ++
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 424 DVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSRRYEKARTLNEHVLSFN 472
+++ + GV P+ ++ ++ G C KAR + E F
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHC-----KARNMKEAWFLFQ 655
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 197/446 (44%), Gaps = 20/446 (4%)
Query: 25 VSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVY------HARFFNVCKSQ 74
V + SYN +I + GRI E LL ME KG Y + RF + K
Sbjct: 242 VCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 75 KAIKEAFRFFKLVPNPTL--STFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTT 132
K I E + L PN + S +L +C ++ E +++R G+ D +YTT
Sbjct: 302 KLI-EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR----QGILPDTVVYTT 356
Query: 133 LITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKN 192
LI K G + A + F+EM + I P+V TY A+I G + G + +A + M K
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 193 VKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDR 252
++PD V F LI ++G + AF V M P+ +T L+ G +D
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 253 AREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALID 312
A E+ + K ++ Y +N ++G+ E A + + G+ D V + L+D
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 313 FAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKP 372
+G+++ A EIL+E +G+ I++++ LM + +L M + + P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 373 TVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLL 432
+T N+L+ C + L + DM S G+ P+ TY L+ + +++ L
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 433 SQAKEDGVIPNLVMFKCII-GMCSRR 457
+ K G ++ + +I G R+
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRK 680
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 186/396 (46%), Gaps = 12/396 (3%)
Query: 67 FFNVCKSQKAIKEAFRFFKLVPNP--TLSTFNMLMSVCASSKD---SEGAFQVLRLVQEA 121
FF V ++EA R F+ + N LS + + + SKD + A V R E
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV 240
Query: 122 GLKADCKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKA 181
G+ + Y +I + G++ + M G P+V +Y +++G + G++ K
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 182 FGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALM 241
+ +M+ K +KP+ ++ ++I + + A + +EM + + PD + L+
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ--GILPDTVVYTTLI 358
Query: 242 KACANAGQVDRAREVYKMIHKYNIKGTPEV--YTIAINCCSQTGDWEFACSVYDDMTKKG 299
G + A + + +H +I TP+V YT I+ Q GD A ++ +M KG
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDI--TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 300 VIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKAL 359
+ PD V + LI+ AG ++ AF + G S +++Y++L+ + A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 360 ELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVAC 419
EL M I L+P + T N+++ LC + + ++++ + ++ GL +T+TY+ L+ A
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 420 ERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMC 454
+ +++ +L + G+ P +V F ++ G C
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 175/378 (46%), Gaps = 7/378 (1%)
Query: 35 LIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFFKLVPN----P 90
L R +++E + +M R+G+L VY CK + I+ A +FF + + P
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK-RGDIRAASKFFYEMHSRDITP 384
Query: 91 TLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVF 150
+ T+ ++S D A ++ + GL+ D +T LI K+G + F V
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 151 HEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQS 210
+ M+ AG PNV TY LIDG K G + A M ++P+ +N+++ +S
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 211 GAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPE 270
G ++ A ++ E E ++ D +T LM A +G++D+A+E+ K + ++ T
Sbjct: 505 GNIEEAVKLVGEF--EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 271 VYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEA 330
+ + +N G E + + M KG+ P+ ++L+ ++AA I ++
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 331 KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQL 390
++G+ +Y +L+ A+N ++A L++ MK +VST + LI +
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Query: 391 PKTMEVLSDMKSLGLCPN 408
+ EV M+ GL +
Sbjct: 683 LEAREVFDQMRREGLAAD 700
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P +TFN L+ + + A + + + G+ D K Y L+ K+ + + +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFN 201
F EM G +V TY LI G K + +A + MR + + D+ +F+
Sbjct: 654 FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
Query: 304 EVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACS-NAKNWQKALELY 362
+VF L+DF G + A + ++ N G+ + + S + + S + A+ ++
Sbjct: 179 DVFFQVLVDF----GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 234
Query: 363 EHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERK 422
+ + V++ N +I +C ++ + +L M+ G P+ I+YS ++ R
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRF 294
Query: 423 DDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMCSR 456
+++ L+ K G+ PN ++ IIG+ R
Sbjct: 295 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 183/403 (45%), Gaps = 15/403 (3%)
Query: 72 KSQKAIKEAFRFFKLVPNPTLS-----TFNMLMSVCASSKDSEGAFQVLRLVQEAGLKAD 126
+ + + A FFK + N L TF +++ A + +L+ ++ G
Sbjct: 51 RQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCS 110
Query: 127 CKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYG 186
L+ ++I+ + G + E+F+ + G +P+V Y ++D ++ + Y
Sbjct: 111 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170
Query: 187 IMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACAN 246
M+ +P+ +N L+ A ++ VD A +L EM+ + PD ++ ++ +
Sbjct: 171 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK--GCCPDAVSYTTVISSMCE 228
Query: 247 AGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVF 306
G V RE+ + + VY IN + D++ A + +M +KG+ P+ +
Sbjct: 229 VGLVKEGRELAE-----RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 307 LSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHM- 365
S LI+ ++G++E AF L + +G I + SSL+ C AL+L+ M
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 366 KSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDV 425
+ L+P V N L+ C + K + V S M+ +G PN TY L+ ++ +
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 426 EVGLMLLSQAKEDGVIPNLVMFKCIIGMCSR--RYEKARTLNE 466
+ + + ++ G PN+V++ ++ R ++++A +L E
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 197/470 (41%), Gaps = 59/470 (12%)
Query: 31 SYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVC-----KSQKAIKEAF 81
+YN L++ ++ LL +M KG Y ++C K + + E F
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF 242
Query: 82 RFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSG 141
P +S +N L++ D +GAF+++R + E G+ + Y+TLI SG
Sbjct: 243 E-------PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 142 KVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIM-RSKNVKPDRVVF 200
+++ F +M+ G PN++T +L+ GC G A + M R ++P+ V +
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAY 355
Query: 201 NALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVY--- 257
N L+ G + +A V + M E P+ T G+L+ A G +D A ++
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHM--EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 258 --------------------------------KMIHKYNIKGTPEVYTIAINCCSQTGDW 285
+++ K N + + I G
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 286 EFACSVYDDMTKKGVIPDEVF-LSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSS 344
++A V+ M ++ P + + L+D A ++E A+ + +E +G+ +Y++
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533
Query: 345 LMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLG 404
L+ NA AL+L M P TMN +I A C + + ++L D+ S G
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCG 592
Query: 405 ---LCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
P+ I+Y+ ++ R + E G++LL + G++P++ + +I
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 150/365 (41%), Gaps = 43/365 (11%)
Query: 232 PDHITIGAL--MKACANAGQVDRAREVYKMIHKYNI-KGTPEVYTIAINCCSQTGDWEFA 288
P+H I L +K V A +K I N+ K TP + + I + G +
Sbjct: 36 PNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSV 95
Query: 289 CSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGA 348
+ M +G E ++I G E A E+ K G + Y+ ++
Sbjct: 96 QYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDT 155
Query: 349 CSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPN 408
Q +Y MK +P V T N L+ ALC +++ ++L +M + G CP+
Sbjct: 156 LLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPD 215
Query: 409 TITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMCSRR-----YEKAR 462
++Y+ ++ + EVGL+ + + P + ++ +I G+C +E R
Sbjct: 216 AVSYTTVISSM-----CEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMR 270
Query: 463 TLNE-----HVLSF--------NSGRPQIENKWTSLALMVYREAIVAGTIPTVEVVSKVL 509
+ E +V+S+ NSG QIE ++ L M+ R G P + +S ++
Sbjct: 271 EMVEKGISPNVISYSTLINVLCNSG--QIELAFSFLTQMLKR-----GCHPNIYTLSSLV 323
Query: 510 -GCL--QLPYNA-DIRERLVENLGVSADALKRSNLCSLIDGFGEYDP--RAFSLLEEAAS 563
GC ++A D+ +++ G+ + + + +L+ GF + +A S+
Sbjct: 324 KGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN---TLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 564 FGIVP 568
G P
Sbjct: 381 IGCSP 385
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 107/263 (40%), Gaps = 12/263 (4%)
Query: 26 SEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAF 81
S + +Y LI ++G + + + M G VY +C+ K KEA
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK-FKEAE 442
Query: 82 RFFKLVPN----PTLSTFNMLMSVCASSKDSEGAFQVLR-LVQEAGLKADCKLYTTLITT 136
+++ P++ TFN + + + A +V R + Q+ + Y L+
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 137 CAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPD 196
AK+ +++ + + E+ G+E + TY L+ G AG A G M PD
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 197 RVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHIT-IGALMKACANAGQVDRARE 255
+ N +I A + G +RA +L ++ PD I+ + C + + D
Sbjct: 563 EITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVIL 622
Query: 256 VYKMIHKYNIKGTPEVYTIAINC 278
+ +MI I + +++ INC
Sbjct: 623 LERMISA-GIVPSIATWSVLINC 644
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 217/495 (43%), Gaps = 52/495 (10%)
Query: 22 AHDVSEQLHSYNRLIR----QGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQK-- 75
A VS L ++N+L+R +G + EC LL+ + ++G+L Y+ +C+ +
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 76 -AIKEAFRFFKLVPNPTLSTFNMLM-SVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTL 133
A++ + P P + T+N L+ +C +SK E + ++V E GL+ D Y TL
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTL 327
Query: 134 ITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNV 193
I K G V + + V G P+ TY +LIDG G+ +A + K +
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 194 KPDRVVFNALITACGQSGAVDRAFDVLAEMN-----AEVHPVD----------------- 231
KP+ +++N LI G + A + EM+ EV +
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 232 -----------PDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTI--AINC 278
PD T L+ + +++ A E+ ++ + P+VYT +N
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD--PDVYTYNSLLNG 505
Query: 279 CSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVG 338
+T +E Y M +KG P+ + L++ K++ A +L+E KN+ ++
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 339 IISYSSLM-GACSNAKNWQKALELYEHM-KSIKLKPTVSTMNALITALCDGDQLPKTMEV 396
+++ +L+ G C N + A L+ M ++ K+ + T N +I A + + ++
Sbjct: 566 AVTFGTLIDGFCKNG-DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 397 LSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIG-MC- 454
+M L P+ TY +++ + +V +G L + E+G IP+L +I +C
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684
Query: 455 -SRRYEKARTLNEHV 468
R YE A ++ V
Sbjct: 685 EDRVYEAAGIIHRMV 699
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 198/487 (40%), Gaps = 60/487 (12%)
Query: 17 KHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDM-ERKGLLDMDKVYHARFFNVCKSQK 75
K + H +S +L G+ ++L DM E G ++ VY N + K
Sbjct: 32 KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGK 91
Query: 76 AIKEAFRFFKLVP----NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYT 131
++EA F+ + PT+ ++N +MSV S + A +V +++ G+ D +T
Sbjct: 92 -VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 132 TLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRS- 190
+ + K+ + A + + M + G E NV Y ++ G + A+ + +G M +
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS 210
Query: 191 ----------------------------------KNVKPDRVVFNALITACGQSGAVDRA 216
+ V P+ +N I Q G +D A
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 217 FDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVY--KMIHKYNIKGTPEVYTI 274
++ + E P PD IT L+ + A EVY KM+++ ++ Y
Sbjct: 271 VRMVGCL-IEQGP-KPDVITYNNLIYGLCKNSKFQEA-EVYLGKMVNE-GLEPDSYTYNT 326
Query: 275 AINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQG 334
I + G + A + D G +PD+ +LID H G+ A + EA +G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 335 ISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALC------DGD 388
I +I Y++L+ SN +A +L M L P V T N L+ LC D D
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
L K M S G P+ T++IL+ + +E L +L ++GV P++ +
Sbjct: 447 GLVKV------MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 449 CII-GMC 454
++ G+C
Sbjct: 501 SLLNGLC 507
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 167/398 (41%), Gaps = 35/398 (8%)
Query: 180 KAFGAYGIMRSK-NVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIG 238
KA + MR + K + ++I G G + +VL +M V + + +G
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 239 ALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKK 298
A MK G+V A V++ + Y+ + T Y ++ +G ++ A VY M +
Sbjct: 82 A-MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 299 GVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKA 358
G+ PD + + + AA +L +QG + +++Y +++G +
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 359 LELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVA 418
EL+ M + + +ST N L+ LC + + ++L + G+ PN TY++ +
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 419 CERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMC--SRRYEKARTLNEHVLSFNSGR 475
++ +++ + ++ E G P+++ + +I G+C S+ E L + V N G
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV---NEGL 317
Query: 476 PQIENKWTSLALMVYREAIVAGTIPTVEVVSKVLGCLQLPYNADIRERLVENLGVSADAL 535
+ +L +AG G +QL ER+V + +
Sbjct: 318 EPDSYTYNTL---------IAGYCKG--------GMVQLA------ERIVGDAVFNGFVP 354
Query: 536 KRSNLCSLIDGF---GEYDPRAFSLLEEAASFGIVPCV 570
+ SLIDG GE + RA +L EA GI P V
Sbjct: 355 DQFTYRSLIDGLCHEGETN-RALALFNEALGKGIKPNV 391
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 28 QLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFN-VCKSQ-------- 74
L ++N L+ R ++ E + LLE+M+ K + + D V + CK+
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSV-NPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 75 -KAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTL 133
+ ++EA++ P T+N+++ + A ++ + + + L D Y +
Sbjct: 589 FRKMEEAYKVSSSTP-----TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 134 ITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNV 193
+ K+G V+ ++ EM+ G P++ T G +I+ +V +A G M K +
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
Query: 194 KPDRV 198
P+ V
Sbjct: 704 VPEAV 708
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 198/441 (44%), Gaps = 21/441 (4%)
Query: 84 FKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKV 143
+ LVP+ TF +M D +GA ++ + E G ++ K G+V
Sbjct: 218 YGLVPDE--KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275
Query: 144 DAMFEVFHEMVNA-GIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNA 202
+ EM N G P+ +T+ L++G KAG V A +M + PD +N+
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 203 LITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHK 262
+I+ + G V A +VL +M P+ +T L+ QV+ A E+ +++
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMIT--RDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
Query: 263 YNIKGTPEVYTI--AINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKV 320
I P+V T I T + A ++++M KG PDE + LID GK+
Sbjct: 394 KGI--LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 321 EAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNAL 380
+ A +L++ + G + +I+Y++L+ A ++A E+++ M+ + T N L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 381 ITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGV 440
I LC ++ +++ M G P+ TY+ LL R D++ ++ +G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 441 IPNLVMFKCII-GMC-SRRYEKARTLNEHV------LSFNSGRPQIE----NKWTSLALM 488
P++V + +I G+C + R E A L + L+ ++ P I+ + T+ A+
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 489 VYREAIVAGTIPTVEVVSKVL 509
++RE + P V +++
Sbjct: 632 LFREMLEQNEAPPDAVSYRIV 652
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 186/438 (42%), Gaps = 47/438 (10%)
Query: 93 STFNMLMSVCASSKDSEGAFQVLR-LVQEAGLKADCKLYTTLITTCAKSGKVDAMFEVFH 151
STF +L+ A + + V+ ++ E GLK D Y ++ G + E+ H
Sbjct: 119 STFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV-DGNSLKLVEISH 177
Query: 152 -EMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQS 210
+M GI+P+V T+ LI +A Q+ A M S + PD F ++ +
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 211 GAVDRAFDVLAEM------------NAEVHPV----------------------DPDHIT 236
G +D A + +M N VH PD T
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 237 IGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTI--AINCCSQTGDWEFACSVYDD 294
L+ AG V A E+ ++ + P+VYT I+ + G+ + A V D
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYD--PDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 295 MTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKN 354
M + P+ V + LI +VE A E+ + ++GI + +++SL+ +N
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 355 WQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSI 414
+ A+EL+E M+S +P T N LI +LC +L + + +L M+ G + ITY+
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 415 LLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII-GMC-SRRYEKARTLNEHVLSFN 472
L+ + + + + + GV N V + +I G+C SRR E A L + ++
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM-- 533
Query: 473 SGRPQIENKWTSLALMVY 490
Q +K+T +L+ +
Sbjct: 534 --EGQKPDKYTYNSLLTH 549
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Query: 297 KKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQ 356
K P+ ++ G +G + +IL++ K+ +G ++ L+ + + +
Sbjct: 76 KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 357 KALELYEHM-KSIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSIL 415
+ L + + M LKP N ++ L DG+ L + M G+ P+ T+++L
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195
Query: 416 LVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
+ A R + +++L G++P+ F ++
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 169/364 (46%), Gaps = 3/364 (0%)
Query: 90 PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
P T++ L+S ++ A ++ +++ ++ K+YTTL+ K GKV+ ++
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
F EM AG P V+TY LI G KAG+V +A+G Y M + PD V N L+ G+
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 210 SGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKAC-ANAGQVDRAREVYKMIHKYNIKGT 268
G V+ +V +EM + P ++ ++KA + V + + ++ +
Sbjct: 351 VGRVEELTNVFSEMG--MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y+I I+ +T E A + ++M +KG P +LI+ G A + EAA E+ +
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
E K +V Y+ ++ +A++L+ MK+ P V NAL++ +
Sbjct: 469 ELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
+ + +L M+ G + +++I+L R + + K G+ P+ V +
Sbjct: 529 MINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYN 588
Query: 449 CIIG 452
++G
Sbjct: 589 TLLG 592
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 153/346 (44%), Gaps = 5/346 (1%)
Query: 123 LKADCKLYTTLITTCAKSGKVDAMFEVFHEMV-NAGIEPNVHTYGALIDGCAKAGQVAKA 181
+ DC Y TLI ++ M+ E+V N + + L+ +A V+KA
Sbjct: 122 FQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKA 181
Query: 182 FGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALM 241
+ + + KP +N++I Q G ++ +V EM E PD IT AL+
Sbjct: 182 LSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCF-PDTITYSALI 240
Query: 242 KACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVI 301
+ G+ D A ++ + ++ T ++YT + + G E A ++++M + G
Sbjct: 241 SSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS 300
Query: 302 PDEVFLSALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALEL 361
P + LI G AG+V+ A+ ++ G++ ++ ++LM ++ +
Sbjct: 301 PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNV 360
Query: 362 YEHMKSIKLKPTVSTMNALITALCDGD-QLPKTMEVLSDMKSLGLCPNTITYSILLVACE 420
+ M + PTV + N +I AL + + + MK+ + P+ TYSIL+
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Query: 421 RKDDVEVGLMLLSQAKEDGVIPNLVMFKCIIGMC--SRRYEKARTL 464
+ + VE L+LL + E G P + +I ++RYE A L
Sbjct: 421 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 181/408 (44%), Gaps = 13/408 (3%)
Query: 26 SEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHAR---FFNVCKSQKAIKEAFR 82
S + SY +L GR I L ++M+ + +K+Y +F V K +KA+
Sbjct: 237 SALISSYEKL---GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 83 FFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKSGK 142
+ +PT+ T+ L+ + + A+ + + GL D L+ K G+
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 143 VDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKA-GQVAKAFGAYGIMRSKNVKPDRVVFN 201
V+ + VF EM P V +Y +I ++ V++ + M++ +V P ++
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 202 ALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIH 261
LI ++ V++A +L EM+ + P P +L+ A A + + A E++K +
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFP--PCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 262 KYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVE 321
+ + VY + I + G A ++++M +G PD +AL+ AG +
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 322 AAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALI 381
A +L++ + G I S++ ++ + ++A+E++E +K +KP T N L+
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL 591
Query: 382 TALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVAC----ERKDDV 425
+ ++ +MK G + ITYS +L A KDDV
Sbjct: 592 GCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDV 639
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 181/463 (39%), Gaps = 73/463 (15%)
Query: 9 LQFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFF 68
+QF GK N+ HD S +Y LIR C++ AR +
Sbjct: 110 IQFFKWAGKRRNFQHDCS----TYMTLIR------CLE-----------------EARLY 142
Query: 69 NVCKSQKAIKEAFRFFKLVPNPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCK 128
+ + I+E R + +P + + L+ +K A V + K
Sbjct: 143 G--EMYRTIQEVVRNTYVSVSPAV--LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSS 198
Query: 129 LYTTLITTCAKSGKVDAMFEVFHEMVNAG-IEPNVHTYGALIDGCAKAGQVAKAFGAYGI 187
Y ++I + G+ + + EV+ EM N G P+ TY ALI K G+ A +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 188 MRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMNAEVHPVDPDHITIGALMKACANA 247
M+ ++P ++ L+ + G V++A D+ EM P T L+K A
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA--GCSPTVYTYTELIKGLGKA 316
Query: 248 GQVDRAREVYKMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFL 307
G+VD A YK DM + G+ PD VFL
Sbjct: 317 GRVDEAYGFYK-----------------------------------DMLRDGLTPDVVFL 341
Query: 308 SALIDFAGHAGKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAK-NWQKALELYEHMK 366
+ L++ G G+VE + E + ++SY++++ A +K + + ++ MK
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 367 SIKLKPTVSTMNALITALCDGDQLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVE 426
+ + P+ T + LI C +++ K + +L +M G P Y L+ A + E
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 427 VGLMLLSQAKED-GVIPNLVMFKCI--IGMCSRRYEKARTLNE 466
L + KE+ G + + V I G C + E NE
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 324 FEILQEA-KNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALIT 382
+ +QE +N +SV S L+ A AK KAL ++ K K KPT ST N++I
Sbjct: 146 YRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVIL 205
Query: 383 ALCDGDQLPKTMEVLSDMKSLGLC-PNTITYSILLVACERKDDVEVGLMLLSQAKEDGVI 441
L Q K EV ++M + G C P+TITYS L+ + E+ + + L + K++ +
Sbjct: 206 MLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQ 265
Query: 442 PNLVMFKCIIGMCSR--RYEKARTLNEHV 468
P ++ ++G+ + + EKA L E +
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 175/396 (44%), Gaps = 13/396 (3%)
Query: 91 TLSTFNMLMSVCASSKDSEGAFQVLRLVQ-EAGLKADCKLYTTLITTCAKSGKVDAMFEV 149
+L+ F ++ A D + + ++ + +Q + K + +YT +I+ + G +D EV
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEV 163
Query: 150 FHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQ 209
F EM + G+ +V +Y ALI+ + G+ + M+++ + P + +N +I AC +
Sbjct: 164 FDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACAR 223
Query: 210 SGA-VDRAFDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGT 268
G + + AEM E + PD +T L+ ACA G D A V++ ++ I
Sbjct: 224 GGLDWEGLLGLFAEMRHE--GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 269 PEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQ 328
Y+ + + E C + +M G +PD + L++ +G ++ A +
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 329 EAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGD 388
+ + G + +YS L+ + + +L+ MKS P +T N LI +G
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 389 QLPKTMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFK 448
+ + + DM + P+ TY ++ AC + E +L + ++P+ +
Sbjct: 402 YFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYT 461
Query: 449 CIIGMCSRRYEKARTLNEHVLSFNS-----GRPQIE 479
+I + +A E +++FN+ P IE
Sbjct: 462 GVI----EAFGQAALYEEALVAFNTMHEVGSNPSIE 493
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 186/452 (41%), Gaps = 52/452 (11%)
Query: 22 AHDVSEQLHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAI 77
+ VS + SY LI R GR ++LL+ M+ + + Y+ N C
Sbjct: 169 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNT-VINACARGGLD 227
Query: 78 KEAF-RFFKLVPN----PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTT 132
E F + + P + T+N L+S CA + A V R + + G+ D Y+
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 133 LITTC-----------------------------------AKSGKVDAMFEVFHEMVNAG 157
L+ T AKSG + VFH+M AG
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 158 IEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAF 217
PN +TY L++ ++G+ + M+S N PD +N LI G+ G
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 218 DVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVYTIAIN 277
+ +M E ++PD T ++ AC G + AR++ + + +I + + YT I
Sbjct: 408 TLFHDMVEE--NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 465
Query: 278 CCSQTGDWEFACSVYDDMTKKGVIPD-EVFLSALIDFAGHAGKVEAAFEILQEAKNQGIS 336
Q +E A ++ M + G P E F S L FA G V+ + IL + GI
Sbjct: 466 AFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA-RGGLVKESEAILSRLVDSGIP 524
Query: 337 VGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPKTMEV 396
++++ + A +++A++ Y M+ + P T+ A+++ + + E
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQ 584
Query: 397 LSDMKSLGLCPNTITYSILLVA---CERKDDV 425
+MK+ + P+ + Y ++L ER DDV
Sbjct: 585 FEEMKASDILPSIMCYCMMLAVYGKTERWDDV 616
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 189/479 (39%), Gaps = 46/479 (9%)
Query: 12 PYPNGKHANYAHDVSEQLHSYNRLIRQGRISECIDLLEDMERKGLLDMDKVYHARFFNVC 71
P + + Y++DV ++ + L +G I+ C+D+ ++ + L D A F
Sbjct: 63 PSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKN--KLSLNDF-----ALVFKEF 115
Query: 72 KSQKAIKEAFRFFKLVPN-----PTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKAD 126
+ + + R FK + P + +++S+ + +V + G+
Sbjct: 116 AGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRS 175
Query: 127 CKLYTTLITTCAKSGKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKA-FGAY 185
YT LI ++G+ + E+ M N I P++ TY +I+ CA+ G + G +
Sbjct: 176 VFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLF 235
Query: 186 GIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVLAEMN---------AEVHPVD----- 231
MR + ++PD V +N L++AC G D A V MN H V+
Sbjct: 236 AEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKL 295
Query: 232 -------------------PDHITIGALMKACANAGQVDRAREVYKMIHKYNIKGTPEVY 272
PD + L++A A +G + A V+ + Y
Sbjct: 296 RRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY 355
Query: 273 TIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHAGKVEAAFEILQEAKN 332
++ +N Q+G ++ ++ +M PD + LI+ G G + + +
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 333 QGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTMNALITALCDGDQLPK 392
+ I + +Y ++ AC + A ++ ++M + + P+ +I A +
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEE 475
Query: 393 TMEVLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAKEDGVIPNLVMFKCII 451
+ + M +G P+ T+ LL + R V+ +LS+ + G+ N F I
Sbjct: 476 ALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQI 534
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 203/499 (40%), Gaps = 37/499 (7%)
Query: 29 LHSYNRLI----RQGRISECIDLLEDMERKGLLDMDKVYHARFFNVCKSQKAIKEAFRFF 84
L +Y+ L+ + R+ + DLL +M G L Y+ KS +IKEA F
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKS-GSIKEAMGVF 340
Query: 85 KLVP----NPTLSTFNMLMSVCASSKDSEGAFQVLRLVQEAGLKADCKLYTTLITTCAKS 140
+ P +T+++L+++ S + Q+ ++ + D Y LI +
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 141 GKVDAMFEVFHEMVNAGIEPNVHTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVF 200
G + +FH+MV IEP++ TY +I C K G A M + ++ P +
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 201 NALITACGQSGAVDRA---FDVLAEMNAEVHPVDPDHITIGALMKACANAGQVDRAREVY 257
+I A GQ+ + A F+ + E+ + +P T +L+ + A G V + +
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGS-----NPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 258 KMIHKYNIKGTPEVYTIAINCCSQTGDWEFACSVYDDMTKKGVIPDEVFLSALIDFAGHA 317
+ I + + I Q G +E A Y DM K PDE L A++ A
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 318 GKVEAAFEILQEAKNQGISVGIISYSSLMGACSNAKNWQKALELYEHMKSIKLKPTVSTM 377
V+ E +E K I I+ Y ++ + W EL E M S ++ +
Sbjct: 576 RLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVI 635
Query: 378 NALITALCDGDQLPKTME-VLSDMKSLGLCPNTITYSILLVACERKDDVEVGLMLLSQAK 436
+I D D + +E VL + S G Y+ LL A E +L++A
Sbjct: 636 GQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEAT 695
Query: 437 EDGVIPNLVMFKCIIGMCSRRYEKARTLNEHVLSFNSGRPQIENKWTSLALMV--YREAI 494
+ G+ P L + K N+ V S + R +T+L++ + + +
Sbjct: 696 KRGLFPEL-------------FRK----NKLVWSVDVHRMSEGGMYTALSVWLNDINDML 738
Query: 495 VAGTIPTVEVVSKVLGCLQ 513
+ G +P + VV V G L+
Sbjct: 739 LKGDLPQLAVVVSVRGQLE 757
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,028,868
Number of Sequences: 539616
Number of extensions: 8827221
Number of successful extensions: 31911
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 22218
Number of HSP's gapped (non-prelim): 2852
length of query: 596
length of database: 191,569,459
effective HSP length: 123
effective length of query: 473
effective length of database: 125,196,691
effective search space: 59218034843
effective search space used: 59218034843
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)