BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007617
(596 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/316 (59%), Positives = 239/316 (75%), Gaps = 1/316 (0%)
Query: 236 RKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSD 295
RK D FFDV E+D +V L QL+RFS RELQ+A+DNFS NI+G+GGFGKVYKG L+D
Sbjct: 2 RKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD 61
Query: 296 NTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLS 355
T VAVKRL++ GGE FQ EV +IS+A+H+NLL+L G+C T +ER+LVYP+M N S
Sbjct: 62 GTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 121
Query: 356 VAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEA 415
VA LR+ + LDWP R+R+A G+A GL YLH+ C+PKIIHRD+KAANILLD+ FEA
Sbjct: 122 VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 181
Query: 416 VLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQR 475
V+ DFGLAKL+D K HV +RGT+GHIAPEYLSTGKSSEKTDVFGYG+ LLEL+TGQR
Sbjct: 182 VVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
Query: 476 AIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLN-TYDSKEVETMVQVALLCTQSTP 534
A D +R ++ LL+E +L +VD +L Y +EVE ++QVALLCTQS+P
Sbjct: 242 AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP 301
Query: 535 EDRPPMAQVVKMLQGE 550
+RP M++VV+ML+G+
Sbjct: 302 MERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/309 (58%), Positives = 234/309 (75%), Gaps = 1/309 (0%)
Query: 243 FFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVK 302
FFDV E+D +V L QL+RFS RELQ+A+DNF NI+G+GGFGKVYKG L+D VAVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 303 RLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRD 362
RL++ + GGE FQ EV +IS+A+H+NLL+L G+C T +ER+LVYP+M N SVA LR+
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 363 LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGL 422
+ LDWP R+R+A G+A GL YLH+ C+PKIIHRD+KAANILLD+ FEAV+ DFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 423 AKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRX 482
AKL+D K HV +RG +GHIAPEYLSTGKSSEKTDVFGYG+ LLEL+TGQRA D +R
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 483 XXXXXXXXXXHIRKLLREDRLNDIVDRNLN-TYDSKEVETMVQVALLCTQSTPEDRPPMA 541
++ LL+E +L +VD +L Y +EVE ++QVALLCTQS+P +RP M+
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 542 QVVKMLQGE 550
+VV+ML+G+
Sbjct: 301 EVVRMLEGD 309
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 19/306 (6%)
Query: 253 KVSLTQLRRFSCRELQLATDNFSE------SNIIGQGGFGKVYKGVLSDNTKVAVKRLQ- 305
+VS T+ FS EL+ T+NF E N +G+GGFG VYKG + +NT VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 306 --DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDL 363
D + + F +E+ +++ H+NL++L+G+ + + LVY +M N S+ RL L
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 364 KPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA 423
G L W R ++A G A G+ +LHE + IHRD+K+ANILLD+ F A + DFGLA
Sbjct: 125 D-GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 424 KLVDA-KLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRX 482
+ + T + ++I GT ++APE L G+ + K+D++ +G+ LLE++TG A+D R
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 483 XXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQ 542
+ + D +D+ +N DS VE M VA C RP + +
Sbjct: 240 PQLLLDIKEEIEDEEK---TIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 543 VVKMLQ 548
V ++LQ
Sbjct: 297 VQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 169/306 (55%), Gaps = 19/306 (6%)
Query: 253 KVSLTQLRRFSCRELQLATDNFSE------SNIIGQGGFGKVYKGVLSDNTKVAVKRLQ- 305
+VS T+ FS EL+ T+NF E N +G+GGFG VYKG + +NT VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 306 --DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDL 363
D + + F +E+ +++ H+NL++L+G+ + + LVY +M N S+ RL L
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 364 KPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA 423
G L W R ++A G A G+ +LHE + IHRD+K+ANILLD+ F A + DFGLA
Sbjct: 125 D-GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 424 KLVDA-KLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRX 482
+ + T + +I GT ++APE L G+ + K+D++ +G+ LLE++TG A+D R
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 483 XXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQ 542
+ + D +D+ +N DS VE M VA C RP + +
Sbjct: 240 PQLLLDIKEEIEDEEK---TIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 543 VVKMLQ 548
V ++LQ
Sbjct: 297 VQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 167/305 (54%), Gaps = 19/305 (6%)
Query: 254 VSLTQLRRFSCRELQLATDNFSE------SNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-- 305
VS T+ FS EL+ T+NF E N +G+GGFG VYKG + +NT VAVK+L
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAM 59
Query: 306 -DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLK 364
D + + F +E+ +++ H+NL++L+G+ + + LVY +M N S+ RL L
Sbjct: 60 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 119
Query: 365 PGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK 424
G L W R ++A G A G+ +LHE + IHRD+K+ANILLD+ F A + DFGLA+
Sbjct: 120 -GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR 175
Query: 425 LVDAKLTHV-TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXX 483
+ V +I GT ++APE L G+ + K+D++ +G+ LLE++TG A+D R
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP 234
Query: 484 XXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + D +D+ +N DS VE M VA C RP + +V
Sbjct: 235 QLLLDIKE---EIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
Query: 544 VKMLQ 548
++LQ
Sbjct: 292 QQLLQ 296
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 150/293 (51%), Gaps = 14/293 (4%)
Query: 261 RFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREV 320
R +L+ AT+NF +IG G FGKVYKGVL D KVA+KR S G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 321 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF 380
L S H +L+ LIG+C +E IL+Y +M+N ++ L + W R +
Sbjct: 88 TL-SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKL-VDAKLTHVTTQIRG 439
G A GL YLH + IIHRD+K+ NILLD+NF + DFG++K + TH+ ++G
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS---RXXXXXXXXXXXHIRK 496
T+G+I PEY G+ +EK+DV+ +G+ L E++ + AI S H
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH--- 260
Query: 497 LLREDRLNDIVDRNL-NTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
+L IVD NL + + + A+ C + EDRP M V+ L+
Sbjct: 261 --NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 150/293 (51%), Gaps = 14/293 (4%)
Query: 261 RFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREV 320
R +L+ AT+NF +IG G FGKVYKGVL D KVA+KR S G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 321 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF 380
L S H +L+ LIG+C +E IL+Y +M+N ++ L + W R +
Sbjct: 88 TL-SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKL-VDAKLTHVTTQIRG 439
G A GL YLH + IIHRD+K+ NILLD+NF + DFG++K + TH+ ++G
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS---RXXXXXXXXXXXHIRK 496
T+G+I PEY G+ +EK+DV+ +G+ L E++ + AI S H
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH--- 260
Query: 497 LLREDRLNDIVDRNL-NTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
+L IVD NL + + + A+ C + EDRP M V+ L+
Sbjct: 261 --NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 160/302 (52%), Gaps = 19/302 (6%)
Query: 257 TQLRRFSCRELQLATDNFSE------SNIIGQGGFGKVYKGVLSDNTKVAVKRLQ---DY 307
T+ FS EL+ T+NF E N G+GGFG VYKG + +NT VAVK+L D
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 59
Query: 308 YSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGE 367
+ + F +E+ + + H+NL++L+G+ + + LVY + N S+ RL L G
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GT 118
Query: 368 KGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVD 427
L W R ++A G A G+ +LHE + IHRD+K+ANILLD+ F A + DFGLA+ +
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 428 AKLTHV-TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXX 486
V ++I GT + APE L G+ + K+D++ +G+ LLE++TG A+D R
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 234
Query: 487 XXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKM 546
+ + D +D+ N DS VE VA C RP + +V ++
Sbjct: 235 LDIKEEIEDEEK---TIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQL 291
Query: 547 LQ 548
LQ
Sbjct: 292 LQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 7/198 (3%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL--QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
IG G FG V++ + VAVK L QD+++ F REV ++ H N++ +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMGA 102
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKI 397
T +V ++ S+ YRL + LD R +A+ A G+ YLH + NP I
Sbjct: 103 VTQPPNLSIVTEYLSRGSL-YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 398 IHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEK 457
+HRDLK+ N+L+D + +CDFGL++L A + GT +APE L S+EK
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 458 TDVFGYGITLLELVTGQR 475
+DV+ +G+ L EL T Q+
Sbjct: 220 SDVYSFGVILWELATLQQ 237
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 7/198 (3%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL--QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
IG G FG V++ + VAVK L QD+++ F REV ++ H N++ +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMGA 102
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKI 397
T +V ++ S+ YRL + LD R +A+ A G+ YLH + NP I
Sbjct: 103 VTQPPNLSIVTEYLSRGSL-YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 398 IHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEK 457
+HR+LK+ N+L+D + +CDFGL++L A + GT +APE L S+EK
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 458 TDVFGYGITLLELVTGQR 475
+DV+ +G+ L EL T Q+
Sbjct: 220 SDVYSFGVILWELATLQQ 237
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 84
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 85 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 137
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 198 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 245
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 246 ----EELYQLMRLCWKERPEDRP 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 77
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 78 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 130
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 191 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 238
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 239 ----EELYQLMRLCWKERPEDRP 257
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 76
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 77 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 129
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 190 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 237
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 238 ----EELYQLMRLCWKERPEDRP 256
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 75
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 76 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 128
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 189 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 236
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 237 ----EELYQLMRLCWKERPEDRP 255
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 81
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 82 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 134
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 195 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 242
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 243 ----EELYQLMRLCWKERPEDRP 261
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 83
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 84 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 136
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 197 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 244
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 245 ----EELYQLMRLCWKERPEDRP 263
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 75
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 76 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 128
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 189 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 236
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 237 ----EELYQLMRLCWKERPEDRP 255
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 75
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 76 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 128
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 189 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 236
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 237 ----EELYQLMRLCWKERPEDRP 255
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 81
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 82 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 134
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 195 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 242
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 243 ----EELYQLMRLCWKERPEDRP 261
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 85
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 86 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 138
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 199 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 246
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 247 ----EELYQLMRLCWKERPEDRP 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 70
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 71 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 123
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 184 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 231
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 232 ----EELYQLMRLCWKERPEDRP 250
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 80
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 81 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 133
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 194 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 241
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 242 ----EELYQLMRLCWKERPEDRP 260
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 269 LATDNFSESNIIGQGGFGKVYKG-VLSDNTKVAVKRLQDYYSPGGEA------AFQREVH 321
LA + IG+GGFG V+KG ++ D + VA+K L S G FQREV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
++S H N+++L G +V F+ + +RL D + W + R+
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLD 130
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANIL---LDDNFE--AVLCDFGLAKLVDAKLTHVTTQ 436
A G+EY+ Q NP I+HRDL++ NI LD+N A + DFGL++ + H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSG 185
Query: 437 IRGTMGHIAPEYLSTGKSS--EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHI 494
+ G +APE + + S EK D + + + L ++TG+ D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-------EYSYGKIKF 238
Query: 495 RKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
++RE+ L + + + V LC P+ RP + +VK L
Sbjct: 239 INMIREEGLRPTIPEDCPP-------RLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G FG+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 71
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 72 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 124
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHR+L+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 185 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 232
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 233 ----EELYQLMRLCWKERPEDRP 251
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 130/293 (44%), Gaps = 38/293 (12%)
Query: 269 LATDNFSESNIIGQGGFGKVYKG-VLSDNTKVAVKRLQDYYSPGGEA------AFQREVH 321
LA + IG+GGFG V+KG ++ D + VA+K L S G FQREV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
++S H N+++L G +V F+ + +RL D + W + R+
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLD 130
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANIL---LDDNFE--AVLCDFGLAKLVDAKLTHVTTQ 436
A G+EY+ Q NP I+HRDL++ NI LD+N A + DFG ++ + H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSG 185
Query: 437 IRGTMGHIAPEYLSTGKSS--EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHI 494
+ G +APE + + S EK D + + + L ++TG+ D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-------EYSYGKIKF 238
Query: 495 RKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
++RE+ L + + + V LC P+ RP + +VK L
Sbjct: 239 INMIREEGLRPTIPEDCPP-------RLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 252 CKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG 311
C S Q + + ++ ++ +GQG FG+V+ G + T+VA+K L+ PG
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PG 219
Query: 312 --GEAAFQREVHLISVAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRDLKPGEK 368
AF +E ++ H+ L+QL Y S E I +V +M S L D GE
Sbjct: 220 TMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGS----LLDFLKGET 273
Query: 369 G--LDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
G L P +A A G+ Y+ E+ N +HRDL+AANIL+ +N + DFGLA+L+
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 427 DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQR 475
+ + + APE G+ + K+DV+ +GI L EL T R
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 252 CKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG 311
C S Q + + ++ ++ +GQG FG+V+ G + T+VA+K L+ PG
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PG 219
Query: 312 --GEAAFQREVHLISVAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRDLKPGEK 368
AF +E ++ H+ L+QL Y S E I +V +M S L D GE
Sbjct: 220 TMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGS----LLDFLKGET 273
Query: 369 G--LDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
G L P +A A G+ Y+ E+ N +HRDL+AANIL+ +N + DFGLA+L+
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 427 DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQR 475
+ + + APE G+ + K+DV+ +GI L EL T R
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 32/263 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G G+V+ G + +TKVAVK L Q SP AF E +L+ H+ L++L Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVRL--YA 75
Query: 339 TTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--RVAFGTAYGLEYLHEQCNP 395
+ E I ++ +M+N S L D G+ K +A A G+ ++ E+
Sbjct: 76 VVTQEPIYIITEYMENGS----LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 128
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ D + DFGLA+L++ + + APE ++ G +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L E+VT R I + +++R D
Sbjct: 189 IKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYRMVRPDNCP----------- 236
Query: 516 SKEVETMVQVALLCTQSTPEDRP 538
E + Q+ LC + PEDRP
Sbjct: 237 ----EELYQLMRLCWKERPEDRP 255
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 130/293 (44%), Gaps = 38/293 (12%)
Query: 269 LATDNFSESNIIGQGGFGKVYKG-VLSDNTKVAVKRLQDYYSPGGEA------AFQREVH 321
LA + IG+GGFG V+KG ++ D + VA+K L S G FQREV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
++S H N+++L G +V F+ + +RL D + W + R+
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLD 130
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANIL---LDDNFE--AVLCDFGLAKLVDAKLTHVTTQ 436
A G+EY+ Q NP I+HRDL++ NI LD+N A + DF L++ + H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSG 185
Query: 437 IRGTMGHIAPEYLSTGKSS--EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHI 494
+ G +APE + + S EK D + + + L ++TG+ D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-------EYSYGKIKF 238
Query: 495 RKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
++RE+ L + + + V LC P+ RP + +VK L
Sbjct: 239 INMIREEGLRPTIPEDCPP-------RLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 252 CKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG 311
C S Q + + ++ ++ +GQG FG+V+ G + T+VA+K L+ PG
Sbjct: 247 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PG 302
Query: 312 --GEAAFQREVHLISVAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRDLKPGEK 368
AF +E ++ H+ L+QL Y S E I +V +M S L D GE
Sbjct: 303 TMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGS----LLDFLKGET 356
Query: 369 G--LDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
G L P +A A G+ Y+ E+ N +HRDL+AANIL+ +N + DFGLA+L+
Sbjct: 357 GKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAANILVGENLVCKVADFGLARLI 413
Query: 427 DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQR 475
+ + + APE G+ + K+DV+ +GI L EL T R
Sbjct: 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 248 GEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-D 306
G +D T RR S + ++ + IG G FG VYKG + VAVK L
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVT 69
Query: 307 YYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG 366
+P AF+ EV ++ H N+L +GY +T + +V + + S+ + L +
Sbjct: 70 APTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHII--- 125
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E + +A TA G++YLH + IIHRDLK+ NI L ++ + DFGLA +
Sbjct: 126 ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVK 182
Query: 427 DA-KLTHVTTQIRGTMGHIAPEYL---STGKSSEKTDVFGYGITLLELVTGQ 474
+H Q+ G++ +APE + S ++DV+ +GI L EL+TGQ
Sbjct: 183 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 69
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P +A A G+ Y+ E+ N
Sbjct: 70 AVVSEEPIXIVTEYMSKGS----LLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMN 124
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 125 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 182
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 183 TIKSDVWSFGILLTELTTKGR 203
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 105/200 (52%), Gaps = 16/200 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCNP 395
S E I Y M+ +S L LK GE G L P +A A G+ Y+ E+ N
Sbjct: 80 AVVSEEPI--YIVMEYMSKGCLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 134
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+ +
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 456 EKTDVFGYGITLLELVTGQR 475
K+DV+ +GI L EL T R
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 16/201 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+G G FG+V+ G + NTKVA+K L+ PG +F E ++ H L+QL Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK----PGTMSPESFLEEAQIMKKLKHDKLVQL--Y 70
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGE-KGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
S E I +V +M S+ L LK GE + L P +A A G+ Y+ E+ N
Sbjct: 71 AVVSEEPIYIVTEYMNKGSL---LDFLKDGEGRALKLPNLVDMAAQVAAGMAYI-ERMN- 125
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL++ANIL+ + + DFGLA+L++ + + APE G+ +
Sbjct: 126 -YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 456 EKTDVFGYGITLLELVTGQRA 476
K+DV+ +GI L ELVT R
Sbjct: 185 IKSDVWSFGILLTELVTKGRV 205
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 252 CKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG 311
C S Q + + ++ ++ +GQG FG+V+ G + T+VA+K L+ PG
Sbjct: 164 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PG 219
Query: 312 --GEAAFQREVHLISVAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRDLKPGEK 368
AF +E ++ H+ L+QL Y S E I +V +M S L D GE
Sbjct: 220 TMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVGEYMSKGS----LLDFLKGET 273
Query: 369 G--LDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
G L P +A A G+ Y+ E+ N +HRDL+AANIL+ +N + DFGLA+L+
Sbjct: 274 GKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 427 DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQR 475
+ + + APE G+ + K+DV+ +GI L EL T R
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P +A A G+ Y+ E+ N
Sbjct: 80 AVVSEEPIYIVIEYMSKGS----LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMN 134
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 72
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P +A A G+ Y+ E+ N
Sbjct: 73 AVVSEEPIYIVTEYMSKGS----LLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMN 127
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 128 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 186 TIKSDVWSFGILLTELTTKGR 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P +A A G+ Y+ E+ N
Sbjct: 80 AVVSEEPIYIVIEYMSKGS----LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMN 134
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 112/211 (53%), Gaps = 18/211 (8%)
Query: 275 SESNIIGQGGFGKVYKGVLSDNT-----KVAVKRLQDYYSPGGEAAFQREVHLISVAIHK 329
+ +IG G FG+VYKG+L ++ VA+K L+ Y+ F E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--GTAYGLE 387
N+++L G + +++ +M+N ++ LR EK ++ + V G A G++
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLR-----EKDGEFSVLQLVGMLRGIAAGMK 161
Query: 388 YLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIA 445
YL N +HRDL A NIL++ N + DFGL++++ D + T+ T+ + + A
Sbjct: 162 YL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
PE +S K + +DV+ +GI + E++T G+R
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKIRHEKLVQL--Y 79
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P +A A G+ Y+ E+ N
Sbjct: 80 AVVSEEPIYIVTEYMSKGS----LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMN 134
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 70
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P +A A G+ Y+ E+ N
Sbjct: 71 AVVSEEPIYIVTEYMSKGS----LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMN 125
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 126 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 184 TIKSDVWSFGILLTELTTKGR 204
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 16/221 (7%)
Query: 260 RRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQR 318
RR S + ++ + IG G FG VYKG + VAVK L +P AF+
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKN 80
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
EV ++ H N+L +GY +T + +V + + S+ + L + E + +
Sbjct: 81 EVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDI 136
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKL--THVTTQ 436
A TA G++YLH + IIHRDLK+ NI L ++ + DFGLA V ++ +H Q
Sbjct: 137 ARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQ 192
Query: 437 IRGTMGHIAPEYL---STGKSSEKTDVFGYGITLLELVTGQ 474
+ G++ +APE + S ++DV+ +GI L EL+TGQ
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 68
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P +A A G+ Y+ E+ N
Sbjct: 69 AVVSEEPIYIVTEYMSKGS----LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMN 123
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 124 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 182 TIKSDVWSFGILLTELTTKGR 202
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 248 GEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-D 306
G +D T RR S + ++ + IG G FG VYKG + VAVK L
Sbjct: 12 GSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVT 69
Query: 307 YYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG 366
+P AF+ EV ++ H N+L +GY +T + +V + + S+ + L +
Sbjct: 70 APTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHII--- 125
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KL 425
E + +A TA G++YLH + IIHRDLK+ NI L ++ + DFGLA +
Sbjct: 126 ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEK 182
Query: 426 VDAKLTHVTTQIRGTMGHIAPEYL---STGKSSEKTDVFGYGITLLELVTGQ 474
+H Q+ G++ +APE + S ++DV+ +GI L EL+TGQ
Sbjct: 183 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P +A A G+ Y+ E+ N
Sbjct: 80 AVVSEEPIYIVTEYMSKGS----LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMN 134
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 36/274 (13%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGL-DWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ LV+ FM++ ++ LR ++GL T + G+ YL E C +I
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFG+ + V +T + + +PE S + S K+
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 459 DVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNT----Y 514
DV+ +G+ + E+ FS K+ E+R N V +++T Y
Sbjct: 184 DVWSFGVLMWEV--------FSEG-------------KIPYENRSNSEVVEDISTGFRLY 222
Query: 515 DSKEVETMV-QVALLCTQSTPEDRPPMAQVVKML 547
+ T V Q+ C + PEDRP +++++ L
Sbjct: 223 KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 36/274 (13%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGL-DWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ LV+ FM++ ++ LR ++GL T + G+ YL E C +I
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFG+ + V +T + + +PE S + S K+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 459 DVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNT----Y 514
DV+ +G+ + E+ FS K+ E+R N V +++T Y
Sbjct: 186 DVWSFGVLMWEV--------FSEG-------------KIPYENRSNSEVVEDISTGFRLY 224
Query: 515 DSKEVETMV-QVALLCTQSTPEDRPPMAQVVKML 547
+ T V Q+ C + PEDRP +++++ L
Sbjct: 225 KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 36/274 (13%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGL-DWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ LV+ FM++ ++ LR ++GL T + G+ YL E C +I
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFG+ + V +T + + +PE S + S K+
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 459 DVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNT----Y 514
DV+ +G+ + E+ FS K+ E+R N V +++T Y
Sbjct: 189 DVWSFGVLMWEV--------FSEG-------------KIPYENRSNSEVVEDISTGFRLY 227
Query: 515 DSKEVETMV-QVALLCTQSTPEDRPPMAQVVKML 547
+ T V Q+ C + PEDRP +++++ L
Sbjct: 228 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P +A A G+ Y+ E+ N
Sbjct: 80 AVVSEEPIYIVCEYMSKGS----LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMN 134
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 252 CKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG 311
C S Q + + ++ ++ +GQG FG+V+ G + T+VA+K L+ PG
Sbjct: 165 CPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----PG 220
Query: 312 GEA--AFQREVHLISVAIHKNLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRDLKPGEK 368
+ AF +E ++ H+ L+QL Y S E I +V +M S L D GE
Sbjct: 221 NMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGS----LLDFLKGEM 274
Query: 369 G--LDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
G L P +A A G+ Y+ E+ N +HRDL+AANIL+ +N + DFGL +L+
Sbjct: 275 GKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAANILVGENLVCKVADFGLGRLI 331
Query: 427 DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQR 475
+ + + APE G+ + K+DV+ +GI L EL T R
Sbjct: 332 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 36/274 (13%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE--GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGL-DWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ LV+ FM++ ++ LR ++GL T + G+ YL E C +I
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFG+ + V +T + + +PE S + S K+
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 459 DVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNT----Y 514
DV+ +G+ + E+ FS K+ E+R N V +++T Y
Sbjct: 206 DVWSFGVLMWEV--------FSEG-------------KIPYENRSNSEVVEDISTGFRLY 244
Query: 515 DSKEVETMV-QVALLCTQSTPEDRPPMAQVVKML 547
+ T V Q+ C + PEDRP +++++ L
Sbjct: 245 KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 76
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P ++ A G+ Y+ E+ N
Sbjct: 77 AVVSEEPIYIVTEYMNKGS----LLDFLKGETGKYLRLPQLVDMSAQIASGMAYV-ERMN 131
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 132 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 190 TIKSDVWSFGILLTELTTKGR 210
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 110/219 (50%), Gaps = 14/219 (6%)
Query: 261 RFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQRE 319
R S + ++ + IG G FG VYKG + VAVK L +P AF+ E
Sbjct: 1 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNE 58
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVA 379
V ++ H N+L +GY +T + +V + + S+ + L E + +A
Sbjct: 59 VGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIA 114
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIR 438
TA G++YLH + IIHRDLK+ NI L ++ + DFGLA + +H Q+
Sbjct: 115 RQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
Query: 439 GTMGHIAPEYLSTGKS---SEKTDVFGYGITLLELVTGQ 474
G++ +APE + S S ++DV+ +GI L EL+TGQ
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 76
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P ++ A G+ Y+ E+ N
Sbjct: 77 AVVSEEPIYIVTEYMNKGS----LLDFLKGETGKYLRLPQLVDMSAQIASGMAYV-ERMN 131
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 132 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 190 TIKSDVWSFGILLTELTTKGR 210
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 14/220 (6%)
Query: 260 RRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQR 318
RR S + ++ + IG G FG VYKG + VAVK L +P AF+
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKN 73
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
EV ++ H N+L +GY +T + +V + + S+ + L + E + +
Sbjct: 74 EVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDI 129
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQI 437
A TA G++YLH + IIHRDLK+ NI L ++ + DFGLA + +H Q+
Sbjct: 130 ARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 186
Query: 438 RGTMGHIAPEYL---STGKSSEKTDVFGYGITLLELVTGQ 474
G++ +APE + S ++DV+ +GI L EL+TGQ
Sbjct: 187 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCN 394
S E I +V +M S L D GE G L P +A A G+ Y+ E+ N
Sbjct: 80 AVVSEEPIYIVTEYMSKGS----LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMN 134
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+HRDL AANIL+ +N + DFGLA+L++ + + APE G+
Sbjct: 135 --YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 455 SEKTDVFGYGITLLELVTGQR 475
+ K+DV+ +GI L EL T R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG G FG VYKG + VAVK L +P AF+ EV ++ H N+L +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+T+ + +V + + S+ + L + E + +A TA G++YLH + II
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKL--THVTTQIRGTMGHIAPEYL---STGK 453
HRDLK+ NI L ++ + DFGLA V ++ +H Q+ G++ +APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 454 SSEKTDVFGYGITLLELVTGQ 474
S ++DV+ +GI L EL+TGQ
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 104/200 (52%), Gaps = 16/200 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPG--GEAAFQREVHLISVAIHKNLLQLIGY 337
+GQG FG+V+ G + T+VA+K L+ PG AF +E ++ H+ L+QL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK----PGTMSPEAFLQEAQVMKKLRHEKLVQL--Y 79
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGEKG--LDWPTRKRVAFGTAYGLEYLHEQCNP 395
S E I Y + +S L LK GE G L P +A A G+ Y+ E+ N
Sbjct: 80 AVVSEEPI--YIVTEYMSKGCLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYV-ERMN- 134
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
+HRDL+AANIL+ +N + DFGLA+L++ + + APE G+ +
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 456 EKTDVFGYGITLLELVTGQR 475
K+DV+ +GI L EL T R
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG G FG VYKG + VAVK L +P AF+ EV ++ H N+L +GY
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 74
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+T + +V + + S+ + L + E + +A TA G++YLH + II
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 128
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKL--THVTTQIRGTMGHIAPEYL---STGK 453
HRDLK+ NI L ++ + DFGLA V ++ +H Q+ G++ +APE +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 454 SSEKTDVFGYGITLLELVTGQ 474
S ++DV+ +GI L EL+TGQ
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG G FG VYKG + VAVK L +P AF+ EV ++ H N+L +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 77
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+T + +V + + S+ + L + E + +A TA G++YLH + II
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKL--THVTTQIRGTMGHIAPEYL---STGK 453
HRDLK+ NI L ++ + DFGLA V ++ +H Q+ G++ +APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 454 SSEKTDVFGYGITLLELVTGQ 474
S ++DV+ +GI L EL+TGQ
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG G FG VYKG + VAVK L +P AF+ EV ++ H N+L +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+T + +V + + S+ + L + E + +A TA G++YLH + II
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKL--THVTTQIRGTMGHIAPEYL---STGK 453
HRDLK+ NI L ++ + DFGLA V ++ +H Q+ G++ +APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 454 SSEKTDVFGYGITLLELVTGQ 474
S ++DV+ +GI L EL+TGQ
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG G FG VYKG + VAVK L +P AF+ EV ++ H N+L +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 88
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+T+ + +V + + S+ + L E + +A TA G++YLH + II
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 399 HRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS--- 454
HRDLK+ NI L ++ + DFGLA + +H Q+ G++ +APE + S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 455 SEKTDVFGYGITLLELVTGQ 474
S ++DV+ +GI L EL+TGQ
Sbjct: 203 SFQSDVYAFGIVLYELMTGQ 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 110/219 (50%), Gaps = 14/219 (6%)
Query: 261 RFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQRE 319
R S + ++ + IG G FG VYKG + VAVK L +P AF+ E
Sbjct: 13 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNE 70
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVA 379
V ++ H N+L +GY +T + +V + + S+ + L E + +A
Sbjct: 71 VGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIA 126
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIR 438
TA G++YLH + IIHRDLK+ NI L ++ + DFGLA + +H Q+
Sbjct: 127 RQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 439 GTMGHIAPEYLSTGKS---SEKTDVFGYGITLLELVTGQ 474
G++ +APE + S S ++DV+ +GI L EL+TGQ
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG G FG VYKG + VAVK L +P AF+ EV ++ H N+L +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 77
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+T + +V + + S+ + L + E + +A TA G++YLH + II
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKL--THVTTQIRGTMGHIAPEYL---STGK 453
HRDLK+ NI L ++ + DFGLA V ++ +H Q+ G++ +APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 454 SSEKTDVFGYGITLLELVTGQ 474
S ++DV+ +GI L EL+TGQ
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 124/274 (45%), Gaps = 36/274 (13%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGL-DWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ LV FM++ ++ LR ++GL T + G+ YL E C +I
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFG+ + V +T + + +PE S + S K+
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 459 DVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNT----Y 514
DV+ +G+ + E+ FS K+ E+R N V +++T Y
Sbjct: 187 DVWSFGVLMWEV--------FSEG-------------KIPYENRSNSEVVEDISTGFRLY 225
Query: 515 DSKEVETMV-QVALLCTQSTPEDRPPMAQVVKML 547
+ T V Q+ C + PEDRP +++++ L
Sbjct: 226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 280 IGQGGFGKVYKGVL-SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG+G FG+V+ G L +DNT VAVK ++ P +A F +E ++ H N+++LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ +Y M+ + L L+ L T ++ A G+EYL +C I
Sbjct: 182 T---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT-MGHIAPEYLSTGKSSEK 457
HRDL A N L+ + + DFG+++ + + +R + APE L+ G+ S +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 458 TDVFGYGITLLE 469
+DV+ +GI L E
Sbjct: 296 SDVWSFGILLWE 307
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 280 IGQGGFGKVYKGVL-SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG+G FG+V+ G L +DNT VAVK ++ P +A F +E ++ H N+++LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ +Y M+ + L L+ L T ++ A G+EYL +C I
Sbjct: 182 T---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT-MGHIAPEYLSTGKSSEK 457
HRDL A N L+ + + DFG+++ + + +R + APE L+ G+ S +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 458 TDVFGYGITLLE 469
+DV+ +GI L E
Sbjct: 296 SDVWSFGILLWE 307
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G++Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKY 147
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 263
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 264 ---------------PLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G++Y
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKY 167
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 168 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 283
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 284 ---------------PLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G++Y
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKY 166
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 167 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 282
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 283 ---------------PLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G++Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKY 148
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 265 ---------------PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G++Y
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKY 140
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 141 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 256
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 257 ---------------PLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G++Y
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKY 146
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 262
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 263 ---------------PLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG G FG VYKG + VAVK L +P AF+ EV ++ H N+L +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+T + +V + + S+ + L + E + +A TA G++YLH + II
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYL---STGKS 454
HRDLK+ NI L ++ + DFGLA + +H Q+ G++ +APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 455 SEKTDVFGYGITLLELVTGQ 474
S ++DV+ +GI L EL+TGQ
Sbjct: 187 SFQSDVYAFGIVLYELMTGQ 206
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G++Y
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKY 148
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 265 ---------------PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G++Y
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKY 147
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 263
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 264 ---------------PLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G++Y
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKY 145
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 146 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 261
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 262 ---------------PLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G++Y
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKY 143
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 259
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 260 ---------------PLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G+++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKF 149
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ ++D + H T + + +A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 265
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 266 ---------------PLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 36/274 (13%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG G FG V+ G + KVA+K +++ E F E ++ H L+QL G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE--GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGL-DWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ LV+ FM++ ++ LR ++GL T + G+ YL E +I
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE---ASVI 125
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFG+ + V +T + + +PE S + S K+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 459 DVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNT----Y 514
DV+ +G+ + E+ FS K+ E+R N V +++T Y
Sbjct: 186 DVWSFGVLMWEV--------FSEG-------------KIPYENRSNSEVVEDISTGFRLY 224
Query: 515 DSKEVETMV-QVALLCTQSTPEDRPPMAQVVKML 547
+ T V Q+ C + PEDRP +++++ L
Sbjct: 225 KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G+++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKF 148
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 265 ---------------PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G+++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKF 149
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 265
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 266 ---------------PLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 108/232 (46%), Gaps = 35/232 (15%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAA-----FQREV 320
L++ + IIG GGFGKVY+ + D V R + P + + ++E
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAAR----HDPDEDISQTIENVRQEA 57
Query: 321 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLK-PGEKGLDWPTRKRVA 379
L ++ H N++ L G C LV F + + L + P + ++W A
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------A 111
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFE--------AVLCDFGLAKLVDAKLT 431
A G+ YLH++ IIHRDLK++NIL+ E + DFGL A+
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL-----AREW 166
Query: 432 HVTTQIR--GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ---RAID 478
H TT++ G +APE + S+ +DV+ YG+ L EL+TG+ R ID
Sbjct: 167 HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G+++
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKF 207
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 208 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 323
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 324 ---------------PLYEVMLKCWHPKAEMRPSFSELV 347
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G+++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKF 148
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 265 ---------------PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G+++
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKF 146
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 262
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 263 ---------------PLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 36/279 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+ +IG+G FG VY G L DN AVK L G + F E ++ H N+L
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 333 QLIGYCTTSS-ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR-VAFG--TAYGLEY 388
L+G C S ++V P+M++ + +R+ PT K + FG A G+++
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKF 153
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKL--THVTTQIRGTMGHIA 445
L + K +HRDL A N +LD+ F + DFGLA+ + D + H T + + +A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
E L T K + K+DV+ +G+ L EL+T + A + R+LL+ + D
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 269
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ +V L C E RP +++V
Sbjct: 270 ---------------PLYEVMLKCWHPKAEMRPSFSELV 293
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 34/264 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREVHLISVAIHKNLLQLIGY 337
+G G FG+V+ + +TKVAVK ++ PG + AF E +++ H L++L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMK----PGSMSVEAFLAEANVMKTLQHDKLVKL--H 76
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT--AYGLEYLHEQCN 394
+ E I ++ FM S L D ++G P K + F A G+ ++ EQ N
Sbjct: 77 AVVTKEPIYIITEFMAKGS----LLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI-EQRN 131
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
IHRDL+AANIL+ + + DFGLA++++ + + APE ++ G
Sbjct: 132 --YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 455 SEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
+ K+DV+ +GI L+E+VT R I + IR L R R+ R N
Sbjct: 190 TIKSDVWSFGILLMEIVTYGR-IPYPGMSNPEV------IRALERGYRM----PRPENC- 237
Query: 515 DSKEVETMVQVALLCTQSTPEDRP 538
E + + + C ++ PE+RP
Sbjct: 238 ----PEELYNIMMRCWKNRPEERP 257
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 130/273 (47%), Gaps = 34/273 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREVHLISVAIHKNLLQLIGY 337
+G G FG+V+ + +TKVAVK ++ PG + AF E +++ H L++L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMK----PGSMSVEAFLAEANVMKTLQHDKLVKL--H 249
Query: 338 CTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT--AYGLEYLHEQCN 394
+ E I ++ FM S L D ++G P K + F A G+ ++ EQ N
Sbjct: 250 AVVTKEPIYIITEFMAKGS----LLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI-EQRN 304
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
IHRDL+AANIL+ + + DFGLA++++ + + APE ++ G
Sbjct: 305 --YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 455 SEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
+ K+DV+ +GI L+E+VT R I + IR L R R+ R N
Sbjct: 363 TIKSDVWSFGILLMEIVTYGR-IPYPGMSNPEV------IRALERGYRM----PRPENC- 410
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
E + + + C ++ PE+RP + +L
Sbjct: 411 ----PEELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREVHLISVAIHKNLLQLIGY 337
+G G FG+V+ G +++TKVAVK L+ PG + AF E +L+ H L++L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK----PGTMSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKI 397
T ++ +M S+ L+ + G+ L P + A G+ Y+ +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NY 131
Query: 398 IHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEK 457
IHRDL+AAN+L+ ++ + DFGLA++++ + + APE ++ G + K
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 458 TDVFGYGITLLELVT 472
+DV+ +GI L E+VT
Sbjct: 192 SDVWSFGILLYEIVT 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREVHLISVAIHKNLLQLIGY 337
+G G FG+V+ G +++TKVAVK L+ PG + AF E +L+ H L++L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK----PGTMSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKI 397
T ++ FM S+ L+ + G+ L P + A G+ Y+ +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NY 130
Query: 398 IHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEK 457
IHRDL+AAN+L+ ++ + DFGLA++++ + + APE ++ G + K
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 458 TDVFGYGITLLELVT 472
++V+ +GI L E+VT
Sbjct: 191 SNVWSFGILLYEIVT 205
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 36/282 (12%)
Query: 277 SNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 336
S IG G FG VYKG + V + ++ D +P AF+ EV ++ H N+L +G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 337 YCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPK 396
Y T + I+ Q + + L E +A TA G++YLH +
Sbjct: 100 YMTKDNLAIVT----QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---N 152
Query: 397 IIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKL--THVTTQIRGTMGHIAPEYLSTGKS 454
IIHRD+K+ NI L + + DFGLA V ++ + Q G++ +APE + +
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLAT-VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 455 ---SEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNL 511
S ++DV+ YGI L EL+TG+ + +S HI D++ +V R
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGE--LPYS------------HINN---RDQIIFMVGRGY 254
Query: 512 NTYDSKEV-----ETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
+ D ++ + M ++ C + E+RP Q++ ++
Sbjct: 255 ASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 34/289 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V +M+N S+ LR + + + V G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGLA+++ D + + T +
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAIDFSRXXXXXXXXXXXHIRKLL 498
+ +PE ++ K + +DV+ YGI L E+++ G+R I+ +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------YWEMSNQDVIKAVD 264
Query: 499 REDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
RL +D Y Q+ L C Q +RP Q+V +L
Sbjct: 265 EGYRLPPPMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 242
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 243 ----PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 79
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 134
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 238
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 239 ----PEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 34/289 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V +M+N S+ LR + + + V G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 156 IASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAIDFSRXXXXXXXXXXXHIRKLL 498
+ +PE ++ K + +DV+ YGI L E+++ G+R I+ +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------YWEMSNQDVIKAVD 264
Query: 499 REDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
RL +D Y Q+ L C Q +RP Q+V +L
Sbjct: 265 EGYRLPPPMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 79
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 80 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 134
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 238
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 239 ----PEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 242
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 243 ----PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 239
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 240 ----PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 46/308 (14%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDN--TKVAVKRLQDYYSPGGEAAFQREVH 321
+ +N IG+G FG+V++ G+L T VAVK L++ S +A FQRE
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFM--------------------QNLSVAYRLR 361
L++ + N+++L+G C L++ +M + ++ R R
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 362 DLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
PG L + +A A G+ YL E+ K +HRDL N L+ +N + DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFG 219
Query: 422 LAK-LVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
L++ + A + + PE + + + ++DV+ YG+ L E+ + +
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279
Query: 481 RXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPM 540
+ E+ + + D N+ + + LC P DRP
Sbjct: 280 ----------------MAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSF 323
Query: 541 AQVVKMLQ 548
+ ++LQ
Sbjct: 324 CSIHRILQ 331
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 237
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 238 ----PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 242
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 243 ----PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 82
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 83 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 137
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 241
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 242 ----PEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 237
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 238 ----PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 239
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 240 ----PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 34/289 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V +M+N S+ LR + + + V G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAIDFSRXXXXXXXXXXXHIRKLL 498
+ +PE ++ K + +DV+ YGI L E+++ G+R I+ +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------YWEMSNQDVIKAVD 264
Query: 499 REDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
RL +D Y Q+ L C Q +RP Q+V +L
Sbjct: 265 EGYRLPPPMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 91
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 92 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 146
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 207 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 250
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 251 ----PEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V +M+N S+ LR + + + V G
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 126
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 127 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
+ +PE ++ K + +DV+ YGI L E+++ G+R
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V +M+N S+ LR + + + V G
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 143
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 144 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
+ +PE ++ K + +DV+ YGI L E+++ G+R
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 237
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 242
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 243 ----PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 239
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 240 ----PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 34/289 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V +M+N S+ LR + + + V G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAIDFSRXXXXXXXXXXXHIRKLL 498
+ +PE ++ K + +DV+ YGI L E+++ G+R I+ +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------YWEMSNQDVIKAVD 264
Query: 499 REDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
RL +D Y Q+ L C Q +RP Q+V +L
Sbjct: 265 EGYRLPPPMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 34/289 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V +M+N S+ LR + + + V G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAIDFSRXXXXXXXXXXXHIRKLL 498
+ +PE ++ K + +DV+ YGI L E+++ G+R I+ +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------YWEMSNQDVIKAVD 264
Query: 499 REDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
RL +D Y Q+ L C Q +RP Q+V +L
Sbjct: 265 EGYRLPPPMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V +M+N S+ LR + + + V G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL +++ D + + T +
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAIDFSRXXXXXXXXXXXHIRKLL 498
+ +PE ++ K + +DV+ YGI L E+++ G+R I+ +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------YWEMSNQDVIKAVD 264
Query: 499 REDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
RL +D Y Q+ L C Q +RP Q+V +L
Sbjct: 265 EGYRLPPPMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V +M+N S+ LR + + + V G
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 153
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 154 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
+ +PE ++ K + +DV+ YGI L E+++ G+R
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 32/287 (11%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREV 320
S + ++ + + + +G G FG+VY+GV + VAVK L++ E F +E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 58
Query: 321 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF 380
++ H NL+QL+G CT ++ FM ++ LR+ E + +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMAT 116
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT 440
+ +EYL ++ IHRDL A N L+ +N + DFGL++L+ +
Sbjct: 117 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRK 496
+ APE L+ K S K+DV+ +G+ L E+ T ID S+ + +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ------------VYE 221
Query: 497 LLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQV 543
LL +D ++R E + ++ C Q P DRP A++
Sbjct: 222 LLEKDYR---MERPEGC-----PEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E + +A + +EYL ++ I
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 237
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 238 ----PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V +M+N S+ LR + + + V G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
+ +PE ++ K + +DV+ YGI L E+++ G+R
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E + +A + +EYL ++ I
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 237
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 238 ----PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E + +A + +EYL ++ I
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 237
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 238 ----PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 128/272 (47%), Gaps = 42/272 (15%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREVHLISVAIHKNLLQLIGY 337
+G G FG+V+ + +TKVAVK ++ PG + AF E +++ H L++L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMK----PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT--AYGLEYLHEQCNP 395
T I+ FM S L D ++G P K + F A G+ ++ EQ N
Sbjct: 246 VTKEPIYIIT-EFMAKGS----LLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI-EQRN- 298
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IHRDL+AANIL+ + + DFGLA+ V AK I+ T APE ++ G +
Sbjct: 299 -YIHRDLRAANILVSASLVCKIADFGLAR-VGAKFP-----IKWT----APEAINFGSFT 347
Query: 456 EKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYD 515
K+DV+ +GI L+E+VT R I + IR L R R+ R N
Sbjct: 348 IKSDVWSFGILLMEIVTYGR-IPYPGMSNPEV------IRALERGYRM----PRPENC-- 394
Query: 516 SKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
E + + + C ++ PE+RP + +L
Sbjct: 395 ---PEELYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E + +A + +EYL ++ I
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 242
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 243 ----PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 32/269 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E + +A + +EYL ++ I
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 237
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQV 543
E + ++ C Q P DRP A++
Sbjct: 238 ----PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 278 NIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
++G+G FG V K VA+K+++ S AF E+ +S H N+++L G
Sbjct: 14 EVVGRGAFGVVCKAKWRAK-DVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
C LV + + S+ L +P + W + G+ YLH
Sbjct: 70 CLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSM 121
Query: 393 CNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLST 451
+IHRDLK N+LL + +CDFG A + TH+T +G+ +APE
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KGSAAWMAPEVFEG 177
Query: 452 GKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNL 511
SEK DVF +GI L E++T ++ D I + ++ +NL
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFD-------EIGGPAFRIMWAVHNGTRPPLI-KNL 229
Query: 512 NTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
K +E+++ C P RP M ++VK++
Sbjct: 230 ----PKPIESLMT---RCWSKDPSQRPSMEEIVKIM 258
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 278 NIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
++G+G FG V K VA+K+++ S AF E+ +S H N+++L G
Sbjct: 15 EVVGRGAFGVVCKAKWRAK-DVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
C LV + + S+ L +P + W + G+ YLH
Sbjct: 71 CLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSM 122
Query: 393 CNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLST 451
+IHRDLK N+LL + +CDFG A + TH+T +G+ +APE
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KGSAAWMAPEVFEG 178
Query: 452 GKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNL 511
SEK DVF +GI L E++T ++ D I + ++ +NL
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRKPFD-------EIGGPAFRIMWAVHNGTRPPLI-KNL 230
Query: 512 NTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
K +E+++ C P RP M ++VK++
Sbjct: 231 ----PKPIESLMT---RCWSKDPSQRPSMEEIVKIM 259
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 32/286 (11%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVH 321
S + ++ + + + +G G +G+VY+GV + VAVK L++ E F +E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
++ H NL+QL+G CT ++ FM ++ LR+ E + +A
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQ 117
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
+ +EYL ++ IHRDL A N L+ +N + DFGL++L+ + +
Sbjct: 118 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKL 497
APE L+ K S K+DV+ +G+ L E+ T ID S+ + +L
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ------------VYEL 222
Query: 498 LREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQV 543
L +D ++R E + ++ C Q P DRP A++
Sbjct: 223 LEKDYR---MERPEGC-----PEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 15/224 (6%)
Query: 255 SLTQLRRFSCRELQLATDN-FSESNIIGQGGFGKVYKGVLSDNTK--VAVKRLQDYYSPG 311
S+ LR F+ + ++ + F++ + IG+G FG+VYKG+ ++TK VA+K + +
Sbjct: 1 SMAHLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKGI-DNHTKEVVAIKIIDLEEAED 59
Query: 312 GEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLD 371
Q+E+ ++S + + G S++ ++ M+ L L LKPG L+
Sbjct: 60 EIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWII---MEYLGGGSALDLLKPGP--LE 114
Query: 372 WPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKL 430
+ GL+YLH + + IHRD+KAAN+LL + + L DFG+A +L D ++
Sbjct: 115 ETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 171
Query: 431 THVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
GT +APE + K D++ GIT +EL G+
Sbjct: 172 KR--NXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V M+N S+ LR + + + V G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 156 IASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAIDFSRXXXXXXXXXXXHIRKLL 498
+ +PE ++ K + +DV+ YGI L E+++ G+R I+ +
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP--------YWEMSNQDVIKAVD 264
Query: 499 REDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
RL +D Y Q+ L C Q +RP Q+V +L
Sbjct: 265 EGYRLPPPMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 32/274 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 324
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 325 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 379
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HR+L A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 440 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 483
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
E + ++ C Q P DRP A++ + +
Sbjct: 484 ----PEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 17/217 (7%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V M+N S+ LR + + + V G
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 126
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 127 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
+ +PE ++ K + +DV+ YGI L E+++ G+R
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 33/256 (12%)
Query: 246 VAGEDDCKVSLTQLRRFSCR-ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTK------ 298
V G D + R + + + +N ++G G FGKV +K
Sbjct: 18 VTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQ 77
Query: 299 VAVKRLQDYYSPGGEAAFQREVHLIS-VAIHKNLLQLIGYCTTSSERILVYPF--MQNLS 355
VAVK L++ A E+ +++ + H+N++ L+G CT S L++ + +L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 356 VAYRLRDLKPGEKGLDWPTRKRV-----------------AFGTAYGLEYLH-EQCNPKI 397
R + K E +++ +KR+ A+ A G+E+L + C
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC---- 193
Query: 398 IHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSE 456
+HRDL A N+L+ +CDFGLA+ + + +V R + +APE L G +
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 457 KTDVFGYGITLLELVT 472
K+DV+ YGI L E+ +
Sbjct: 254 KSDVWSYGILLWEIFS 269
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 32/274 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 282
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E ++ +A + +EYL ++ I
Sbjct: 283 TREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFI 337
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HR+L A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 398 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 441
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
E + ++ C Q P DRP A++ + +
Sbjct: 442 ----PEKVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 17/217 (7%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLI 323
+L N S ++G G FG+V G L +K VA+K L+ Y+ F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--G 381
H N+++L G T S ++V M+N S+ LR + + + V G
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
A G++YL + +HRDL A NIL++ N + DFGL++++ D + + T +
Sbjct: 156 IASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
+ +PE ++ K + +DV+ YGI L E+++ G+R
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 32/287 (11%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREV 320
S + ++ + + + +G G +G+VY+GV + VAVK L++ E F +E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 58
Query: 321 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF 380
++ H NL+QL+G CT ++ FM ++ LR+ E + +A
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMAT 116
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT 440
+ +EYL ++ IHRDL A N L+ +N + DFGL++L+ +
Sbjct: 117 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRK 496
+ APE L+ K S K+DV+ +G+ L E+ T ID S+ + +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ------------VYE 221
Query: 497 LLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQV 543
LL +D ++R E + ++ C Q P DRP A++
Sbjct: 222 LLEKDYR---MERPEGC-----PEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 324 SVAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ ++++ PF L +D + L+W
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQ 126
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 32/274 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G G +G+VY+GV + VAVK L++ E F +E ++ H NL+QL+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 285
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
T ++ FM ++ LR+ E + +A + +EYL ++ I
Sbjct: 286 TREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFI 340
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HR+L A N L+ +N + DFGL++L+ + + APE L+ K S K+
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 459 DVFGYGITLLELVT----GQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTY 514
DV+ +G+ L E+ T ID S+ + +LL +D ++R
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLSQ------------VYELLEKDYR---MERPEGC- 444
Query: 515 DSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
E + ++ C Q P DRP A++ + +
Sbjct: 445 ----PEKVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 270 ATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIH 328
++ F + +G G + VYKG+ + VA+K ++ G + RE+ L+ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 329 KNLLQLIGYCTTSSERILVYPFMQN-LSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
+N+++L T ++ LV+ FM N L R + +GL+ K + GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 388 YLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE 447
+ HE KI+HRDLK N+L++ + L DFGLA+ + ++++ T+ + AP+
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPD 178
Query: 448 YLSTGKS-SEKTDVFGYGITLLELVTGQ 474
L ++ S D++ G L E++TG+
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 324 SVAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ ++++ PF L +D + L+W
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 129
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 130 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 135
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 136 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
F++ IG+G FG+V+KG+ + KV A+K + + Q+E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
+ G ++ ++ M+ L L L+PG LD + GL+YLH +
Sbjct: 69 KYYGSYLKDTKLWII---MEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE 123
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLST 451
K IHRD+KAAN+LL ++ E L DFG+A +L D ++ T GT +APE +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQ 178
Query: 452 GKSSEKTDVFGYGITLLELVTGQ 474
K D++ GIT +EL G+
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 324 SVAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ ++++ PF L +D + L+W
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 128
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 324 SVAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ ++++ PF L +D + L+W
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 126
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 128
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 119
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 120 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 131
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 132 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
F++ IG+G FG+V+KG+ + KV A+K + + Q+E+ ++S +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
+ G ++ ++ M+ L L L+PG LD + GL+YLH +
Sbjct: 89 KYYGSYLKDTKLWII---MEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE 143
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLST 451
K IHRD+KAAN+LL ++ E L DFG+A +L D ++ T GT +APE +
Sbjct: 144 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQ 198
Query: 452 GKSSEKTDVFGYGITLLELVTGQ 474
K D++ GIT +EL G+
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 324 SVAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ ++++ PF L +D + L+W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 127
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 128
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 128
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 324 SVAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ ++++ PF L +D + L+W
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 127
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 68
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 69 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 122
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 123 IAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 150
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 151 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 132
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 32/278 (11%)
Query: 278 NIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T +++ +M+N S+ LR + R G G++YL +
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM- 150
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+HRDL A NIL++ N + DFG+++++ D + + T + + APE ++
Sbjct: 151 --SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 452 GKSSEKTDVFGYGITLLELVT-GQRAI-DFSRXXXXXXXXXXXHIRKLLREDRLNDIVDR 509
K + +DV+ YGI + E+++ G+R D S I+ + RL +D
Sbjct: 209 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV---------IKAIEEGYRLPPPMDC 259
Query: 510 NLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
+ + Q+ L C Q DRP Q+V ML
Sbjct: 260 PIALH---------QLMLDCWQKERSDRPKFGQIVNML 288
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 32/278 (11%)
Query: 278 NIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T +++ +M+N S+ LR + R G G++YL +
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM- 129
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+HRDL A NIL++ N + DFG+++++ D + + T + + APE ++
Sbjct: 130 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 452 GKSSEKTDVFGYGITLLELVT-GQRAI-DFSRXXXXXXXXXXXHIRKLLREDRLNDIVDR 509
K + +DV+ YGI + E+++ G+R D S I+ + RL +D
Sbjct: 188 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV---------IKAIEEGYRLPPPMDC 238
Query: 510 NLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
+ + Q+ L C Q DRP Q+V ML
Sbjct: 239 PIALH---------QLMLDCWQKERSDRPKFGQIVNML 267
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
F++ IG+G FG+V+KG+ + KV A+K + + Q+E+ ++S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
+ G ++ ++ M+ L L L+PG LD + GL+YLH +
Sbjct: 84 KYYGSYLKDTKLWII---MEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE 138
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLST 451
K IHRD+KAAN+LL ++ E L DFG+A +L D ++ GT +APE +
Sbjct: 139 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPEVIKQ 193
Query: 452 GKSSEKTDVFGYGITLLELVTGQ 474
K D++ GIT +EL G+
Sbjct: 194 SAYDSKADIWSLGITAIELARGE 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 24/229 (10%)
Query: 259 LRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEA 314
+R F+ +E+ ++ E +IG G FG+V +G L K VA+K L+ Y+
Sbjct: 6 VREFA-KEIDVSYVKIEE--VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR 62
Query: 315 AFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPT 374
F E ++ H N+++L G T S +++ FM+N ++ LR L G+ +
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQ----FTV 117
Query: 375 RKRVAF--GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTH 432
+ V G A G+ YL E +HRDL A NIL++ N + DFGL++ ++ +
Sbjct: 118 IQLVGMLRGIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 433 VTTQIRGTMGHI-----APEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
T+ G I APE ++ K + +D + YGI + E+++ G+R
Sbjct: 175 -PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGER 222
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 278 NIIGQGGFGKVYKGVL--SDNT--KVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLL 332
I+G+G FG V +G L D T KVAVK ++ D S F E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 333 QLIGYCTTSSER-----ILVYPFMQ--NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYG 385
+L+G C S + +++ PFM+ +L L+ G K + T + A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQI-RGTMGHI 444
+EYL N +HRDL A N +L D+ + DFGL+K + + + +I + + I
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVT 472
A E L+ + K+DV+ +G+T+ E+ T
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 278 NIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+IG+G FG VY G D + A+K L AF RE L+ H N+L
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 334 LIGYCTTSS---ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG--TAYGLEY 388
LIG +L Y +L R P K L ++FG A G+EY
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-------ISFGLQVARGMEY 139
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTHVTT--QIRGTMGHIA 445
L EQ K +HRDL A N +LD++F + DFGLA+ ++D + V R + A
Sbjct: 140 LAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA 196
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVT 472
E L T + + K+DV+ +G+ L EL+T
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 32/278 (11%)
Query: 278 NIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T +++ +M+N S+ LR + R G G++YL +
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDM- 135
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+HRDL A NIL++ N + DFG+++++ D + + T + + APE ++
Sbjct: 136 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 452 GKSSEKTDVFGYGITLLELVT-GQRAI-DFSRXXXXXXXXXXXHIRKLLREDRLNDIVDR 509
K + +DV+ YGI + E+++ G+R D S I+ + RL +D
Sbjct: 194 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV---------IKAIEEGYRLPPPMDC 244
Query: 510 NLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
+ + Q+ L C Q DRP Q+V ML
Sbjct: 245 PIALH---------QLMLDCWQKERSDRPKFGQIVNML 273
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
F++ IG+G FG+V+KG+ + KV A+K + + Q+E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
+ G ++ ++ M+ L L L+PG LD + GL+YLH +
Sbjct: 69 KYYGSYLKDTKLWII---MEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSE 123
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLST 451
K IHRD+KAAN+LL ++ E L DFG+A +L D ++ GT +APE +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPEVIKQ 178
Query: 452 GKSSEKTDVFGYGITLLELVTGQ 474
K D++ GIT +EL G+
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVL-----SDNTKVAVKRLQDYYSPGGEAAFQREVHLI 323
L ++G G FG VYKG+ + VA+K L + P F E ++
Sbjct: 12 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ H +L++L+G C + + +++ + P L + +D + L+W
Sbjct: 72 ASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQ 125
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL E+ +++HRDL A N+L+ + DFGLA+L++ +
Sbjct: 126 IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 182
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ +A E + K + ++DV+ YG+T+ EL+T
Sbjct: 183 IKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVL-----SDNTKVAVKRLQDYYSPGGEAAFQREVHLI 323
L ++G G FG VYKG+ + VA+K L + P F E ++
Sbjct: 35 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ H +L++L+G C + + +++ + P L + +D + L+W
Sbjct: 95 ASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQ 148
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL E+ +++HRDL A N+L+ + DFGLA+L++ +
Sbjct: 149 IAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 205
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ +A E + K + ++DV+ YG+T+ EL+T
Sbjct: 206 IKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 19/208 (9%)
Query: 279 IIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+IG G FG+V +G L K VA+K L+ Y+ F E ++ H N+++L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--GTAYGLEYLHEQ 392
G T S +++ FM+N ++ LR L G+ + + V G A G+ YL E
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLR-LNDGQ----FTVIQLVGMLRGIASGMRYLAEM 135
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTH--VTTQIRGTMG--HIAPEY 448
+HRDL A NIL++ N + DFGL++ ++ + T+ + G + APE
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 449 LSTGKSSEKTDVFGYGITLLELVT-GQR 475
++ K + +D + YGI + E+++ G+R
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGER 220
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 19/208 (9%)
Query: 279 IIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--GTAYGLEYLHEQ 392
G T S+ +++ FM+N S+ LR + + + V G A G++YL +
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLR-----QNDGQFTVIQLVGMLRGIAAGMKYLADM 154
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMG--HIAPEY 448
+HRDL A NIL++ N + DFGL++ + D T+ + G + APE
Sbjct: 155 ---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 449 LSTGKSSEKTDVFGYGITLLELVT-GQR 475
+ K + +DV+ YGI + E+++ G+R
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGER 239
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREV--HLISVA 326
+ D F + ++G+GGFG+V+ + K+ + + +Q + I
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 327 IHKNLLQLIGYC-TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY- 384
+H + + Y T ++ LV M + Y + ++ G P R F TA
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP---RAIFYTAQI 298
Query: 385 --GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
GLE+LH++ II+RDLK N+LLDD+ + D GLA + A T T GT G
Sbjct: 299 VSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPG 354
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+APE L + D F G+TL E++ +
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 324 SVAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ ++++ PF L +D + L+W
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 129
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFG AKL+ A+ + +
Sbjct: 130 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREV--HLISVA 326
+ D F + ++G+GGFG+V+ + K+ + + +Q + I
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 327 IHKNLLQLIGYC-TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY- 384
+H + + Y T ++ LV M + Y + ++ G P R F TA
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP---RAIFYTAQI 298
Query: 385 --GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
GLE+LH++ II+RDLK N+LLDD+ + D GLA + A T T GT G
Sbjct: 299 VSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPG 354
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+APE L + D F G+TL E++ +
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREV--HLISVA 326
+ D F + ++G+GGFG+V+ + K+ + + +Q + I
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 327 IHKNLLQLIGYC-TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY- 384
+H + + Y T ++ LV M + Y + ++ G P R F TA
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP---RAIFYTAQI 298
Query: 385 --GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
GLE+LH++ II+RDLK N+LLDD+ + D GLA + A T T GT G
Sbjct: 299 VSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPG 354
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+APE L + D F G+TL E++ +
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREV--HLISVA 326
+ D F + ++G+GGFG+V+ + K+ + + +Q + I
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 327 IHKNLLQLIGYC-TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY- 384
+H + + Y T ++ LV M + Y + ++ G P R F TA
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP---RAIFYTAQI 298
Query: 385 --GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
GLE+LH++ II+RDLK N+LLDD+ + D GLA + A T T GT G
Sbjct: 299 VSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPG 354
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+APE L + D F G+TL E++ +
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+ L++ SP E +++
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 159
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 160 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 122/240 (50%), Gaps = 38/240 (15%)
Query: 249 EDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDY 307
E DC+ L E D + ++G+G +G VY G LS+ ++A+K +
Sbjct: 7 EGDCESDLL--------EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI--- 55
Query: 308 YSPGGEAAFQREVHLISVAIHKNLLQ--LIGYCTTSSERILVYPFMQNL---SVAYRLRD 362
P ++ + + +H +A+HK+L ++ Y + SE + FM+ + S++ LR
Sbjct: 56 --PERDSRYSQPLHE-EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS 112
Query: 363 ----LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL- 417
LK E+ + + T++ + GL+YLH+ +I+HRD+K N+L+ + + VL
Sbjct: 113 KWGPLKDNEQTIGFYTKQILE-----GLKYLHDN---QIVHRDIKGDNVLI-NTYSGVLK 163
Query: 418 -CDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS--SEKTDVFGYGITLLELVTGQ 474
DFG +K + A + T GT+ ++APE + G + D++ G T++E+ TG+
Sbjct: 164 ISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 324 SVAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ ++++ PF L +D + L+W
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 127
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFG AKL+ A+ + +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++ G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 125
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFG AKL+ A+ + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++ G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 324 SVAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ ++++ PF L +D + L+W
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 132
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 127
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFG AKL+ A+ + +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 324 SVAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ ++++ PF L +D + L+W
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 127
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFG AKL+ A+ + +
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++ G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 132
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFGLAKL+ A+ + +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 279 IIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
++G+G FG+ K + +V V + + + F +EV ++ H N+L+ IG
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ +++ ++ ++ + + W R A A G+ YLH II
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NII 130
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKL-VDAK--------LTHVTTQIR----GTMGHIA 445
HRDL + N L+ +N V+ DFGLA+L VD K L + R G +A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELV 471
PE ++ EK DVF +GI L E++
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 18/219 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGV-LSDNTKV----AVKRLQDYYSPGGEAAFQREVHLI 323
L F + ++G G FG VYKG+ + + KV A+K L++ SP E +++
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + ++ +L+G C TS+ +++ + PF L +D + L+W
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 132
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL ++ +++HRDL A N+L+ + DFG AKL+ A+ + +
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQRAID 478
+ +A E + + ++DV+ YG+T+ EL+T G + D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 277 SNIIGQGGFGKVYKGVLS----DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+IG G FG+V G L + VA+K L+ Y+ F E ++ H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
L G T ++V FM+N ++ LR + R G A G+ YL +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---GIAAGMRYLADM 164
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLS 450
+HRDL A NIL++ N + DFGL++++ D + + TT + + APE +
Sbjct: 165 ---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 451 TGKSSEKTDVFGYGITLLELVT-GQR 475
K + +DV+ YGI + E+++ G+R
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGER 247
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 117/223 (52%), Gaps = 30/223 (13%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLIS 324
E D + ++G+G +G VY G LS+ ++A+K + P ++ + + +H
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI-----PERDSRYSQPLHE-E 55
Query: 325 VAIHKNLLQ--LIGYCTTSSERILVYPFMQNL---SVAYRLRD----LKPGEKGLDWPTR 375
+A+HK+L ++ Y + SE + FM+ + S++ LR LK E+ + + T+
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 115
Query: 376 KRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL--CDFGLAKLVDAKLTHV 433
+ + GL+YLH+ +I+HRD+K N+L+ + + VL DFG +K + A +
Sbjct: 116 QILE-----GLKYLHDN---QIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRL-AGINPC 165
Query: 434 TTQIRGTMGHIAPEYLSTGKS--SEKTDVFGYGITLLELVTGQ 474
T GT+ ++APE + G + D++ G T++E+ TG+
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 279 IIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCN 394
G T S ++V +M+N S+ L K + + G + G++YL +
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGISAGMKYLSDM-- 143
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLSTG 452
+HRDL A NIL++ N + DFGL++++ D + + T + + APE ++
Sbjct: 144 -GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 453 KSSEKTDVFGYGITLLELVT-GQR 475
K + +DV+ YGI + E+V+ G+R
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGER 226
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDNT----KVAVKRLQDYYSPGGEAA-----FQREVHLISVAIHKN 330
+G GG VY L+++T KVA+K + + P E F+REVH S H+N
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAI---FIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
++ +I LV +++ +++ + P L T G+++ H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTAINFTNQILDGIKHAH 128
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAPEYL 449
+ +I+HRD+K NIL+D N + DFG+AK L + LT T + GT+ + +PE
Sbjct: 129 DM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQA 184
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ E TD++ GI L E++ G+
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVH 321
S + ++ + + + +G G +G+VY GV + VAVK L++ E F +E
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 80
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
++ H NL+QL+G CT +V +M ++ LR+ E + +A
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREE--VTAVVLLYMATQ 138
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
+ +EYL ++ IHRDL A N L+ +N + DFGL++L+ + +
Sbjct: 139 ISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI 195
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
APE L+ S K+DV+ +G+ L E+ T
Sbjct: 196 KWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNTK----VAVKRLQDYYSPGGEAAFQRE 319
+ D + +G+G FG+V G+ D K VAVK L+D + + E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ LR +P
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ + + + A G+EYL Q K IHRDL A N+L+ +N + DFGLA+ +
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ TT R + +APE L + ++DV+ +G+ + E+ T
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKN 330
+ + + +G+G +G VYK S VA+KR++ D G + RE+ L+ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP----GEKGLDWPTRKRVAFGTAYGL 386
++ LI + LV+ FM+ +DLK + GL K + G+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFME--------KDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 387 EYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAP 446
+ H+ +I+HRDLK N+L++ + L DFGLA+ + T ++ T+ + AP
Sbjct: 133 AHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAP 188
Query: 447 EYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ L + K S D++ G E++TG+
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVL---SDNTK--VAVKRLQDYYSPGGEAAFQREVHLI 323
L + ++G G FG VYKG+ +N K VA+K L++ SP E +++
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 324 SVAIHKNLLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ + +L+G C TS+ +++ + P+ L R + L+W
Sbjct: 74 AGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQ 127
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGT 440
A G+ YL + +++HRDL A N+L+ + DFGLA+L+D T +
Sbjct: 128 IAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 184
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ +A E + + + ++DV+ YG+T+ EL+T
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKN 330
+ + + +G+G +G VYK S VA+KR++ D G + RE+ L+ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP----GEKGLDWPTRKRVAFGTAYGL 386
++ LI + LV+ FM+ +DLK + GL K + G+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFME--------KDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 387 EYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAP 446
+ H+ +I+HRDLK N+L++ + L DFGLA+ + T ++ T+ + AP
Sbjct: 133 AHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAP 188
Query: 447 EYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ L + K S D++ G E++TG+
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 279 IIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+IG G FG+V G L K VA+K L+ Y+ F E ++ H N++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--GTAYGLEYLHEQ 392
G T S+ +++ FM+N S+ LR + + + V G A G++YL +
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLR-----QNDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMG--HIAPEY 448
+HR L A NIL++ N + DFGL++ + D T+ + G + APE
Sbjct: 129 ---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 449 LSTGKSSEKTDVFGYGITLLELVT-GQR 475
+ K + +DV+ YGI + E+++ G+R
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGER 213
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 278 NIIGQGGFGKVYKG-VLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 336
I +G FG V+K +++D V + LQD S E RE+ H+NLLQ I
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSE----REIFSTPGMKHENLLQFIA 76
Query: 337 YCTTSS----ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
S E L+ F S+ L+ + W VA + GL YLHE
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKG-----NIITWNELCHVAETMSRGLSYLHED 131
Query: 393 C--------NPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGTMGH 443
P I HRD K+ N+LL + AVL DFGLA + K T GT +
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 444 IAPEYLSTGKSSE-----KTDVFGYGITLLELVTGQRAID 478
+APE L + + + D++ G+ L ELV+ +A D
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 76 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 132
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 133 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 77 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 82 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 138
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 139 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 81 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 137
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 138 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 108 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 164
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 165 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 40/304 (13%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAA 315
F E +++ + + +GQG FG VY+G D T+VAVK + + S
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 316 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDW 372
F E ++ ++++L+G + ++V M + + LR L+P G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 373 PTRK---RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAK 429
PT + ++A A G+ YL+ + K +HRDL A N ++ +F + DFG+ +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----D 179
Query: 430 LTHVTTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXX 484
+ +G G +APE L G + +D++ +G+ L E+ +
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------------ 227
Query: 485 XXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ L E L ++D E + + +C Q P+ RP ++V
Sbjct: 228 ----LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 545 KMLQ 548
+L+
Sbjct: 284 NLLK 287
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 84 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 140
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 141 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 77 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 116/285 (40%), Gaps = 30/285 (10%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVA 326
++L + + +G G FG V G VAVK +++ E F +E +
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKE--GSMSEDEFFQEAQTMMKL 60
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGL 386
H L++ G C S+ +Y + +S L L+ KGL+ + + G+
Sbjct: 61 SHPKLVKFYGVC---SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGM 117
Query: 387 EYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHI 444
+L + IHRDL A N L+D + + DFG+ + V D ++ V T+ +
Sbjct: 118 AFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF--PVKWS 172
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVT-GQRAIDFSRXXXXXXXXXXXHIRKLLREDRL 503
APE K S K+DV+ +GI + E+ + G+ D H +L R
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH--RLYRPHLA 230
Query: 504 NDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
+D T+ Q+ C PE RP Q++ ++
Sbjct: 231 SD---------------TIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 75 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 131
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 132 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 80 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 136
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 77 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 95 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 151
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 83 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 139
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 140 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 270 ATDNFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAI 327
+ + + ++G+G +G V K D + VA+K+ L+ + RE+ L+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
H+NL+ L+ C LV+ F+ + L DL+ GLD+ ++ F G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTI----LDDLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 388 YLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE 447
+ H IIHRD+K NIL+ + LCDFG A+ + A ++ T + APE
Sbjct: 139 FCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPE 194
Query: 448 YL-STGKSSEKTDVFGYGITLLELVTGQ 474
L K + DV+ G + E+ G+
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 40/304 (13%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAA 315
F E +++ + + +GQG FG VY+G D T+VAVK + + S
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 316 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDW 372
F E ++ ++++L+G + ++V M + + LR L+P G
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 373 PTRK---RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAK 429
PT + ++A A G+ YL+ + K +HRDL A N ++ +F + DFG+ +
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----D 176
Query: 430 LTHVTTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXX 484
+ +G G +APE L G + +D++ +G+ L E+ +
Sbjct: 177 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------------ 224
Query: 485 XXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ L E L ++D E + + +C Q P+ RP ++V
Sbjct: 225 ----LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
Query: 545 KMLQ 548
+L+
Sbjct: 281 NLLK 284
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 95 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 151
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 109/232 (46%), Gaps = 30/232 (12%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVL------SDNTKVAVKRLQDYYSPGGEAAFQREVH 321
+ N +G+G FGKV K + T VAVK L++ SP E +
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLK---PG---------EKG 369
++ H ++++L G C+ +L+ + + S+ LR+ + PG
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 370 LDWPTRKRVAFG--------TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
LD P + + G + G++YL E K++HRDL A NIL+ + + + DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFG 195
Query: 422 LAKLVDAKLTHVT-TQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
L++ V + ++V +Q R + +A E L + ++DV+ +G+ L E+VT
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 40/302 (13%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P + L P+
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 377 RV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ + +
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXET 176
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXX 488
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-----------LAEQP 225
Query: 489 XXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
++LR ++D+ N D ++++ +C Q P+ RP +++ ++
Sbjct: 226 YQGLSNEQVLRFVMEGGLLDKPDNCPD-----MLLELMRMCWQYNPKMRPSFLEIISSIK 280
Query: 549 GE 550
E
Sbjct: 281 EE 282
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ + +D + G+EYL +
Sbjct: 80 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTK- 136
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL-- 332
+G+G FG V L DNT VAVK+LQ + P + FQRE+ ++ A+H + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILK-ALHSDFIVK 72
Query: 333 -QLIGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
+ + Y E LV ++ + LRD L+ LD + G+EYL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGC----LRDFLQRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKL--VDAKLTHVTTQIRGTMGHIAPEY 448
+ + +HRDL A NIL++ + DFGLAKL +D V + + APE
Sbjct: 129 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 449 LSTGKSSEKTDVFGYGITLLELVT 472
LS S ++DV+ +G+ L EL T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 12/200 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCN 394
G C ++ R L M+ L L+ ++ +D + G+EYL +
Sbjct: 80 KGVCYSAGRRNLKL-IMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK-- 136
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLSTG 452
+ IHRDL NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 137 -RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 453 KSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 169
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 22/212 (10%)
Query: 269 LATDNFSESNIIGQ-GGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
L ++F E IIG+ G FGKVYK + + +A ++ D S + E+ +++
Sbjct: 8 LNPEDFWE--IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 65
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
H N+++L+ + ++ F +V + +L E+ L + V T L
Sbjct: 66 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALN 122
Query: 388 YLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR----GTMGH 443
YLH+ KIIHRDLKA NIL + + L DFG V AK T Q R GT
Sbjct: 123 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFG----VSAKNTRTXIQRRDSFIGTPYW 175
Query: 444 IAPEYLSTGKSSE-----KTDVFGYGITLLEL 470
+APE + S + K DV+ GITL+E+
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P + L P+
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 377 RV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ + +
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXET 185
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHLISVAIHKN 330
+ +G+GGF K Y+ D +V ++ P Q+E +AIHK+
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 331 L--LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
L ++G+ + VY ++ + L +L K + P + T G++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLE-ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH N ++IHRDLK N+ L+D+ + + DFGLA ++ T + GT +IAPE
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEV 213
Query: 449 LSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
L S + D++ G L L+ G+ + S
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 176
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 114 QGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 169
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 168
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 169
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 168
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 19/278 (6%)
Query: 280 IGQGGFGKVY---KGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FGKV +D T VAVK L++ P + +QRE+ ++ H+++++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCN 394
G C E+ V M+ + + LRD P + A G+ YLH Q
Sbjct: 76 KGCCEDQGEKS-VQLVMEYVPLG-SLRDYLP-RHCVGLAQLLLFAQQICEGMAYLHAQ-- 130
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG--TMGHIAPEYLSTG 452
IHR L A N+LLD++ + DFGLAK V + + G + APE L
Sbjct: 131 -HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 453 KSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDR--N 510
K +DV+ +G+TL EL+T D ++ H + + RL ++++R
Sbjct: 190 KFYYASDVWSFGVTLYELLT---YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGER 246
Query: 511 LNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
L D E + + C ++ RP +V +LQ
Sbjct: 247 LPRPDRCPCE-IYHLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 19/278 (6%)
Query: 280 IGQGGFGKVY---KGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FGKV +D T VAVK L++ P + +QRE+ ++ H+++++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCN 394
G C E+ V M+ + + LRD P + A G+ YLH Q
Sbjct: 77 KGCCEDQGEKS-VQLVMEYVPLG-SLRDYLP-RHCVGLAQLLLFAQQICEGMAYLHAQ-- 131
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG--TMGHIAPEYLSTG 452
IHR L A N+LLD++ + DFGLAK V + + G + APE L
Sbjct: 132 -HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 453 KSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLNDIVDR--N 510
K +DV+ +G+TL EL+T D ++ H + + RL ++++R
Sbjct: 191 KFYYASDVWSFGVTLYELLT---YCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGER 247
Query: 511 LNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
L D E + + C ++ RP +V +LQ
Sbjct: 248 LPRPDRCPCE-IYHLMKNCWETEASFRPTFQNLVPILQ 284
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 40/304 (13%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAA 315
F E +++ + + +GQG FG VY+G D T+VAVK + + S
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 316 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDW 372
F E ++ ++++L+G + ++V M + + LR L+P G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 373 PTRK---RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAK 429
PT + ++A A G+ YL+ + K +HRDL A N ++ +F + DFG+ +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----D 179
Query: 430 LTHVTTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXX 484
+ +G G +APE L G + +D++ +G+ L E+ +
Sbjct: 180 IYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------------ 227
Query: 485 XXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ L E L ++D E + + +C Q P+ RP ++V
Sbjct: 228 ----LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 545 KMLQ 548
+L+
Sbjct: 284 NLLK 287
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWY 173
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 168
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 40/300 (13%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAAFQRE 319
E +++ + + +GQG FG VY+G D T+VAVK + + S F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRK 376
++ ++++L+G + ++V M + + LR L+P G PT +
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 377 ---RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++A A G+ YL+ + K +HRDL A N ++ +F + DFG+ + +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXET 183
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXX 488
+G G +APE L G + +D++ +G+ L E+ +
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------- 227
Query: 489 XXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
+ L E L ++D E + + +C Q P RP ++V +L+
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 169
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 176
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
F++ IG+G FG+V+KG+ + +V A+K + + Q+E+ ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
+ G S+ ++ M+ L L L+ G D + GL+YLH +
Sbjct: 85 KYYGSYLKGSKLWII---MEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYLHSE 139
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLST 451
K IHRD+KAAN+LL + + L DFG+A +L D ++ T GT +APE +
Sbjct: 140 ---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQ 194
Query: 452 GKSSEKTDVFGYGITLLELVTGQ 474
K D++ GIT +EL G+
Sbjct: 195 SAYDSKADIWSLGITAIELAKGE 217
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 30/232 (12%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVL------SDNTKVAVKRLQDYYSPGGEAAFQREVH 321
+ N +G+G FGKV K + T VAVK L++ SP E +
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLK---PG---------EKG 369
++ H ++++L G C+ +L+ + + S+ LR+ + PG
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 370 LDWPTRKRVAFG--------TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
LD P + + G + G++YL E K++HRDL A NIL+ + + + DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFG 195
Query: 422 LAKLVDAKLTHVT-TQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
L++ V + + V +Q R + +A E L + ++DV+ +G+ L E+VT
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 40/304 (13%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAA 315
F E +++ + + +GQG FG VY+G D T+VAVK + + S
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 316 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDW 372
F E ++ ++++L+G + ++V M + + LR L+P G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 373 PTRK---RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAK 429
PT + ++A A G+ YL+ + K +HRDL A N ++ +F + DFG+ +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----D 179
Query: 430 LTHVTTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXX 484
+ +G G +APE L G + +D++ +G+ L E+ +
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS------------ 227
Query: 485 XXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
+ L E L ++D E + + +C Q P+ RP ++V
Sbjct: 228 ----LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 545 KMLQ 548
+L+
Sbjct: 284 NLLK 287
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 128/305 (41%), Gaps = 37/305 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNTK--VAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR-----DLKPG 366
E+ LI + H N++ L+G CT ++V + NLS R + KP
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 367 EKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA 423
+ D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFGLA
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 424 KLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRX 482
+ + V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGAS 249
Query: 483 XXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQ 542
R+L R+ Y + E M Q L C P RP ++
Sbjct: 250 PYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTFSE 300
Query: 543 VVKML 547
+V+ L
Sbjct: 301 LVEHL 305
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 24/228 (10%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAA 315
F E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 316 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDW 372
F E ++ ++++L+G + +++ M + LR L+P + L
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 373 PTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAK 429
P+ ++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ +
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----D 178
Query: 430 LTHVTTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ +G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHLISVAIHKN 330
+ +G+GGF K Y+ D +V ++ P Q+E +AIHK+
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 331 L--LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
L ++G+ + VY ++ + L +L K + P + T G++Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLE-ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH N ++IHRDLK N+ L+D+ + + DFGLA ++ + GT +IAPE
Sbjct: 142 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEV 197
Query: 449 LSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
L S + D++ G L L+ G+ + S
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 118/291 (40%), Gaps = 35/291 (12%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
D++ +IG G V + KVA+KR+ +E+ +S H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDL-KPGEKG---LDWPTRKRVAFGTAYGL 386
++ E LV + SV ++ + GE LD T + GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 387 EYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV----DAKLTHVTTQIRGTMG 442
EYLH+ IHRD+KA NILL ++ + DFG++ + D V GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 443 HIAPEYLSTGKSSE-KTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLRED 501
+APE + + + K D++ +GIT +EL TG A + + K+L
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPM----------KVLMLT 234
Query: 502 RLND-------IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVK 545
ND + D+ + K M+ LC Q PE RP A++++
Sbjct: 235 LQNDPPSLETGVQDKEMLKKYGKSFRKMIS---LCLQKDPEKRPTAAELLR 282
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P L P+
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 377 RV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ + +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 191
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 118/291 (40%), Gaps = 35/291 (12%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
D++ +IG G V + KVA+KR+ +E+ +S H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDL-KPGEKG---LDWPTRKRVAFGTAYGL 386
++ E LV + SV ++ + GE LD T + GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 387 EYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV----DAKLTHVTTQIRGTMG 442
EYLH+ IHRD+KA NILL ++ + DFG++ + D V GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 443 HIAPEYLSTGKSSE-KTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLRED 501
+APE + + + K D++ +GIT +EL TG A + + K+L
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPM----------KVLMLT 239
Query: 502 RLND-------IVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVK 545
ND + D+ + K M+ LC Q PE RP A++++
Sbjct: 240 LQNDPPSLETGVQDKEMLKKYGKSFRKMIS---LCLQKDPEKRPTAAELLR 287
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 25/218 (11%)
Query: 261 RFSCRELQ----LATDNFSESNIIGQGGFGKVYK-GVLSDNTKVAVKRLQDYYSPGGEAA 315
++S ++ Q L T +F ++I G+ Y VL V +K+++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVE---------H 52
Query: 316 FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTR 375
E ++S+ H ++++ G + + ++ +++ + LR + P
Sbjct: 53 TNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK----SQRFPNPVA 108
Query: 376 KRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT 435
K A LEYLH + II+RDLK NILLD N + DFG AK V VT
Sbjct: 109 KFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTY 161
Query: 436 QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+ GT +IAPE +ST ++ D + +GI + E++ G
Sbjct: 162 XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHLISVAIHKN 330
+ +G+GGF K Y+ D +V ++ P Q+E +AIHK+
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 331 L--LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
L ++G+ + VY ++ + L +L K + P + T G++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLE-ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH N ++IHRDLK N+ L+D+ + + DFGLA ++ + GT +IAPE
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEV 213
Query: 449 LSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
L S + D++ G L L+ G+ + S
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHLISVAIHKN 330
+ +G+GGF K Y+ D +V ++ P Q+E +AIHK+
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 331 L--LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
L ++G+ + VY ++ + L +L K + P + T G++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLE-ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH N ++IHRDLK N+ L+D+ + + DFGLA ++ + GT +IAPE
Sbjct: 158 LH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKXLCGTPNYIAPEV 213
Query: 449 LSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
L S + D++ G L L+ G+ + S
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P L P+
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 377 RV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ + +
Sbjct: 129 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 181
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 17/214 (7%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEK--GLDWPTRKRVAFGTAY 384
H N+++L+ T ++ LV+ F+ L+D G+ P K F
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ-----DLKDFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+ +
Sbjct: 115 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 170
Query: 445 APEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHK 329
+NF + IG+G +G VYK L+ K D + G + RE+ L+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTAY 384
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 170
Query: 445 APEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHK 329
+NF + IG+G +G VYK L+ K D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTAY 384
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
GL + H +++HRDLK N+L++ L DFGLA+ + T ++ T+ +
Sbjct: 114 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 169
Query: 445 APEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + + F+RE+ ++ H N+++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
G C ++ R L M+ L LRD L+ ++ +D + G+EYL +
Sbjct: 78 KGVCYSAGRRNLKL-IMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK- 134
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+ IHR+L NIL+++ + DFGL K++ D + V + APE L+
Sbjct: 135 --RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 452 GKSSEKTDVFGYGITLLELVT 472
K S +DV+ +G+ L EL T
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P + L P+
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 377 RV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ + +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 191
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P + L P+
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 377 RV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ + +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 184
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P + L P+
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 377 RV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ + +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 178
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 319
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPG------------ 366
+ ++ + HKN++ L+G CT ++ + ++ L+ +P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
E+ L A+ A G+EYL + K IHRDL A N+L+ ++ + DFGLA+ +
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 427 -DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
TT R + +APE L + ++DV+ +G+ L E+ T
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P + L P+
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 377 RV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ + +
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 185
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXX 488
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------- 229
Query: 489 XXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
+ L E L +++ L + + ++ +C Q P+ RP +++ ++
Sbjct: 230 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
Query: 549 GE 550
E
Sbjct: 290 EE 291
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHLISVAIHKNLLQ--LI 335
+G+GGF K ++ +D +V ++ P QRE + ++IH++L ++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKI----VPKSLLLKPHQREKMSMEISIHRSLAHQHVV 80
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
G+ + V+ ++ L L +L K L P + G +YLH
Sbjct: 81 GFHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
++IHRDLK N+ L+++ E + DFGLA V+ T + GT +IAPE LS S
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 195
Query: 456 EKTDVFGYGITLLELVTGQRAIDFS 480
+ DV+ G + L+ G+ + S
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 15/213 (7%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 327 IHKNLLQLIGYCTTSSERILVYPFM-QNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYG 385
H N+++L+ T ++ LV+ F+ Q+L L G+ P K F G
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALT----GIPLPLIKSYLFQLLQG 118
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
L + H +++HRDLK N+L++ L DFGLA+ + ++ T+ + A
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 174
Query: 446 PEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
PE L K S D++ G E+VT +RA+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FGKVYK + + +A ++ D S + E+ +++ H N+++L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIH 399
+ ++ F +V + +L E+ L + V T L YLH+ KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 400 RDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR----GTMGHIAPEYLSTGKSS 455
RDLKA NIL + + L DFG V AK T T Q R GT +APE + S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFG----VSAKNTR-TIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 456 E-----KTDVFGYGITLLEL 470
+ K DV+ GITL+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 280 IGQGGFGKVY----KGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G+G FGKV+ +L + K VAVK L++ S FQRE L+++ H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 84
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLR-------------DLKPGEKGLDWPTRKRVAF 380
G CT ++V+ +M++ + LR D+ PG GL VA
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG--QLLAVAS 142
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTHVTTQIRG 439
A G+ YL +HRDL N L+ + DFG+++ + V +
Sbjct: 143 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ + PE + K + ++DV+ +G+ L E+ T
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEK--GLDWPTRKRVAFGTAY 384
H N+++L+ T ++ LV+ F+ + L+D G+ P K F
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-----SMDLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+ +
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 173
Query: 445 APEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEK--GLDWPTRKRVAFGTAY 384
H N+++L+ T ++ LV+ F+ + L+D G+ P K F
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-----SMDLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+ +
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 172
Query: 445 APEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P + L P+
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 377 RV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ + +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 184
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSDN--TKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P + L P+
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 377 RV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++ A A G+ YL+ K +HRDL A N ++ ++F + DFG+ + +
Sbjct: 161 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 213
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXX 488
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------- 257
Query: 489 XXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
+ L E L +++ L + + ++ +C Q P+ RP +++ ++
Sbjct: 258 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
Query: 549 GE 550
E
Sbjct: 318 EE 319
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 280 IGQGGFGKVY----KGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G+G FGKV+ +L + K VAVK L++ S FQRE L+++ H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 78
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLR-------------DLKPGEKGLDWPTRKRVAF 380
G CT ++V+ +M++ + LR D+ PG GL VA
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG--QLLAVAS 136
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTHVTTQIRG 439
A G+ YL +HRDL N L+ + DFG+++ + V +
Sbjct: 137 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ + PE + K + ++DV+ +G+ L E+ T
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHLISVAIHKNLLQ--LI 335
+G+GGF K ++ +D +V ++ P QRE + ++IH++L ++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKI----VPKSLLLKPHQREKMSMEISIHRSLAHQHVV 80
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
G+ + V+ ++ L L +L K L P + G +YLH
Sbjct: 81 GFHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
++IHRDLK N+ L+++ E + DFGLA V+ T + GT +IAPE LS S
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 195
Query: 456 EKTDVFGYGITLLELVTGQRAIDFS 480
+ DV+ G + L+ G+ + S
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHLISVAIHKNLLQ--LI 335
+G+GGF K ++ +D +V ++ P QRE + ++IH++L ++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKI----VPKSLLLKPHQREKMSMEISIHRSLAHQHVV 84
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
G+ + V+ ++ L L +L K L P + G +YLH
Sbjct: 85 GFHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 140
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
++IHRDLK N+ L+++ E + DFGLA V+ T + GT +IAPE LS S
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 199
Query: 456 EKTDVFGYGITLLELVTGQRAIDFS 480
+ DV+ G + L+ G+ + S
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 40/286 (13%)
Query: 280 IGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+GQG FG VY+G D T+VAVK + + S F E ++ ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRK---RVAFGTAYGLE 387
L+G + ++V M + + LR L+P G PT + ++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 388 YLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG----- 442
YL+ + K +HRDL A N ++ +F + DFG+ + + +G G
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVR 196
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDR 502
+APE L G + +D++ +G+ L E+ + + L E
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------------LAEQPYQGLSNEQV 240
Query: 503 LNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
L ++D E + + +C Q P+ RP ++V +L+
Sbjct: 241 LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 268 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 319
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDW------ 372
+ ++ + HKN++ L+G CT ++ + ++ L+ +P GL++
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP--PGLEYCYNPSH 126
Query: 373 -PTRK-------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK 424
P + A+ A G+EYL + K IHRDL A N+L+ ++ + DFGLA+
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 425 LVDAKLTHV-----TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ H+ TT R + +APE L + ++DV+ +G+ L E+ T
Sbjct: 184 ----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 57/229 (24%)
Query: 278 NIIGQGGFGKVYKGVLSDN---TKVAVKRLQDYYSPGGEAAFQREVH-LISVAIHKNLLQ 333
++IG+G FG+V K + + A+KR+++Y S F E+ L + H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV--------------- 378
L+G C R +Y L++ Y P LD+ + RV
Sbjct: 91 LLGAC---EHRGYLY-----LAIEY-----APHGNLLDFLRKSRVLETDPAFAIANSTAS 137
Query: 379 ----------AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDA 428
A A G++YL ++ + IHRDL A NIL+ +N+ A + DFGL++ +
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQE- 193
Query: 429 KLTHVTTQIRGTMGHI-----APEYLSTGKSSEKTDVFGYGITLLELVT 472
++ TMG + A E L+ + +DV+ YG+ L E+V+
Sbjct: 194 ------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 57/229 (24%)
Query: 278 NIIGQGGFGKVYKGVLSDN---TKVAVKRLQDYYSPGGEAAFQREVH-LISVAIHKNLLQ 333
++IG+G FG+V K + + A+KR+++Y S F E+ L + H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV--------------- 378
L+G C R +Y L++ Y P LD+ + RV
Sbjct: 81 LLGAC---EHRGYLY-----LAIEY-----APHGNLLDFLRKSRVLETDPAFAIANSTAS 127
Query: 379 ----------AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDA 428
A A G++YL ++ + IHRDL A NIL+ +N+ A + DFGL++ +
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQE- 183
Query: 429 KLTHVTTQIRGTMGHI-----APEYLSTGKSSEKTDVFGYGITLLELVT 472
++ TMG + A E L+ + +DV+ YG+ L E+V+
Sbjct: 184 ------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + P + FQRE+ ++ A+H + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILK-ALHSDFIVK 75
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
+ R + M+ L LRD L+ LD + G+EYL +
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGC-LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR- 133
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKL--VDAKLTHVTTQIRGTMGHIAPEYLST 451
+ +HRDL A NIL++ + DFGLAKL +D V + + APE LS
Sbjct: 134 --RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 191
Query: 452 GKSSEKTDVFGYGITLLELVT 472
S ++DV+ +G+ L EL T
Sbjct: 192 NIFSRQSDVWSFGVVLYELFT 212
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 280 IGQGGFGKVY----KGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G+G FGKV+ +L + K VAVK L++ S FQRE L+++ H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 107
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLR-------------DLKPGEKGLDWPTRKRVAF 380
G CT ++V+ +M++ + LR D+ PG GL VA
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG--QLLAVAS 165
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTHVTTQIRG 439
A G+ YL +HRDL N L+ + DFG+++ + V +
Sbjct: 166 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ + PE + K + ++DV+ +G+ L E+ T
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 116 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 171
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 14/218 (6%)
Query: 265 RELQLATDNFSESNI-IGQGGFGKVYKGVLSDNTK---VAVKRLQDYYSPGGEAAFQREV 320
++L L DN ++I +G G FG V +GV K VA+K L+ RE
Sbjct: 2 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 61
Query: 321 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF 380
++ + +++LIG C +E +++ M ++ K E + +
Sbjct: 62 QIMHQLDNPYIVRLIGVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLH 117
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT 440
+ G++YL E+ +HRDL A N+LL + A + DFGL+K + A ++ T + G
Sbjct: 118 QVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 441 --MGHIAPEYLSTGKSSEKTDVFGYGITLLE-LVTGQR 475
+ APE ++ K S ++DV+ YG+T+ E L GQ+
Sbjct: 175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 212
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 278 NIIGQGGFGKVYKG-VLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 336
+ +G FG V+K +L++ V + +QD S E EV+ + H+N+LQ IG
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNE----YEVYSLPGMKHENILQFIG 85
Query: 337 Y----CTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
+ + L+ F + S++ L+ + W +A A GL YLHE
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLK-----ANVVSWNELCHIAETMARGLAYLHED 140
Query: 393 C-------NPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGTMGHI 444
P I HRD+K+ N+LL +N A + DFGLA K K T GT ++
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 445 APEYLSTGKSSE-----KTDVFGYGITLLELVTGQRAID 478
APE L + + + D++ G+ L EL + A D
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + P + FQRE+ ++ A+H + +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILK-ALHSDFIVK 76
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
+ R + M+ L LRD L+ LD + G+EYL +
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGC-LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR- 134
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKL--VDAKLTHVTTQIRGTMGHIAPEYLST 451
+ +HRDL A NIL++ + DFGLAKL +D V + + APE LS
Sbjct: 135 --RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 192
Query: 452 GKSSEKTDVFGYGITLLELVT 472
S ++DV+ +G+ L EL T
Sbjct: 193 NIFSRQSDVWSFGVVLYELFT 213
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 39/307 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR-------DLK 364
E+ LI + H N++ L+G CT ++V + NLS R + +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 365 PGEKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
P + D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 193
Query: 422 LAKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
LA+ + +V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 194 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG 247
Query: 481 RXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPM 540
R+L R+ Y + E M Q L C P RP
Sbjct: 248 ASPYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTF 298
Query: 541 AQVVKML 547
+++V+ L
Sbjct: 299 SELVEHL 305
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 280 IGQGGFGKV---YKGVLSDNTK--VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FG V L DNT VAVK+LQ + P + FQRE+ ++ A+H + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILK-ALHSDFIVK 88
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRD-LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
+ R + M+ L LRD L+ LD + G+EYL +
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGC-LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR- 146
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKL--VDAKLTHVTTQIRGTMGHIAPEYLST 451
+ +HRDL A NIL++ + DFGLAKL +D V + + APE LS
Sbjct: 147 --RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 204
Query: 452 GKSSEKTDVFGYGITLLELVT 472
S ++DV+ +G+ L EL T
Sbjct: 205 NIFSRQSDVWSFGVVLYELFT 225
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 168
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 168
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 268 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 319
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDW------ 372
+ ++ + HKN++ L+G CT ++ + ++ L+ +P GL++
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP--PGLEYCYNPSH 141
Query: 373 -PTRK-------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK 424
P + A+ A G+EYL + K IHRDL A N+L+ ++ + DFGLA+
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 425 LVDAKLTHV-----TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ H+ TT R + +APE L + ++DV+ +G+ L E+ T
Sbjct: 199 ----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 268 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 319
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 76
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDW------ 372
+ ++ + HKN++ L+G CT ++ + ++ L+ +P GL++
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP--PGLEYSYNPSH 134
Query: 373 -PTRK-------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK 424
P + A+ A G+EYL + K IHRDL A N+L+ ++ + DFGLA+
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 425 LVDAKLTHV-----TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ H+ TT R + +APE L + ++DV+ +G+ L E+ T
Sbjct: 192 ----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 268 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 319
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDW------ 372
+ ++ + HKN++ L+G CT ++ + ++ L+ +P GL++
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP--PGLEYSYNPSH 141
Query: 373 -PTRK-------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK 424
P + A+ A G+EYL + K IHRDL A N+L+ ++ + DFGLA+
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 425 LVDAKLTHV-----TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ H+ TT R + +APE L + ++DV+ +G+ L E+ T
Sbjct: 199 ----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 30/232 (12%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVL------SDNTKVAVKRLQDYYSPGGEAAFQREVH 321
+ N +G+G FGKV K + T VAVK L++ SP E +
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLK---PG---------EKG 369
++ H ++++L G C+ +L+ + + S+ LR+ + PG
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 370 LDWPTRKRVAFG--------TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
LD P + + G + G++YL E ++HRDL A NIL+ + + + DFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFG 195
Query: 422 LAKLVDAKLTHVT-TQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
L++ V + + V +Q R + +A E L + ++DV+ +G+ L E+VT
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 39/307 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR-------DLK 364
E+ LI + H N++ L+G CT ++V + NLS R + +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 365 PGEKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
P + D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 184
Query: 422 LAKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
LA+ + +V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG 238
Query: 481 RXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPM 540
R+L R+ Y + E M Q L C P RP
Sbjct: 239 ASPYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTF 289
Query: 541 AQVVKML 547
+++V+ L
Sbjct: 290 SELVEHL 296
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+ +
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 170
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+ +
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 168
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFGTA 383
N+++L+ T ++ LV+ F+ +DLK G+ P K F
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLH--------QDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+ +
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 168
Query: 444 IAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
APE L K S D++ G E+VT +RA+
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVY----KGVLSD--NTKVAVKRLQDYYSPGGEAAFQRE 319
E ++A + + S +GQG FG VY KGV+ D T+VA+K + + S F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKG---LDWPTRK 376
++ ++++L+G + +++ M + LR L+P + L P+
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 377 R---VAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
+ +A A G+ YL+ K +HRDL A N + ++F + DFG+ + +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR----DIYET 178
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXX 488
+G G ++PE L G + +DV+ +G+ L E+ T
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------- 222
Query: 489 XXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
+ L E L +++ L + ++++ +C Q P+ RP +++ ++
Sbjct: 223 LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
Query: 549 GE 550
E
Sbjct: 283 EE 284
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 268 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 319
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 16 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 75
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDW------ 372
+ ++ + HKN++ L+G CT ++ + ++ L+ +P GL++
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP--PGLEYSYNPSH 133
Query: 373 -PTRK-------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK 424
P + A+ A G+EYL + K IHRDL A N+L+ ++ + DFGLA+
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 425 LVDAKLTHV-----TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ H+ TT R + +APE L + ++DV+ +G+ L E+ T
Sbjct: 191 ----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 268 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 319
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 13 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 72
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDW------ 372
+ ++ + HKN++ L+G CT ++ + ++ L+ +P GL++
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP--PGLEYSYNPSH 130
Query: 373 -PTRK-------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK 424
P + A+ A G+EYL + K IHRDL A N+L+ ++ + DFGLA+
Sbjct: 131 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 425 LVDAKLTHV-----TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ H+ TT R + +APE L + ++DV+ +G+ L E+ T
Sbjct: 188 ----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR-------DLK 364
E+ LI + H N++ L+G CT ++V + NLS R + +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 365 PGEKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
P + D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 193
Query: 422 LAKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
LA+ + V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG 247
Query: 481 RXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPM 540
R+L R+ Y + E M Q L C P RP
Sbjct: 248 ASPYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTF 298
Query: 541 AQVVKML 547
+++V+ L
Sbjct: 299 SELVEHL 305
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 39/307 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR-------DLK 364
E+ LI + H N++ L+G CT ++V + NLS R + +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 365 PGEKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
P + D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 184
Query: 422 LAKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
LA+ + +V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG 238
Query: 481 RXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPM 540
R+L R+ Y + E M Q L C P RP
Sbjct: 239 ASPYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTF 289
Query: 541 AQVVKML 547
+++V+ L
Sbjct: 290 SELVEHL 296
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK--VAVKRL--QDYYSPGGEAAFQREVHLI 323
Q A ++F +G+G FG VY N+K +A+K L G E +REV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLA-REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTA 383
S H N+L+L GY S+ VY ++ + R+L+ K + T + A
Sbjct: 63 SHLRHPNILRLYGYFHDSTR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELA 118
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR----G 439
L Y H + K+IHRD+K N+LL E + DFG + H + R G
Sbjct: 119 NALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCG 168
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
T+ ++ PE + EK D++ G+ E + G+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 39/307 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR-------DLK 364
E+ LI + H N++ L+G CT ++V + NLS R + +
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 365 PGEKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
P + D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFG
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 230
Query: 422 LAKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
LA+ + +V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 231 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG 284
Query: 481 RXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPM 540
R+L R+ Y + E M Q L C P RP
Sbjct: 285 ASPYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTF 335
Query: 541 AQVVKML 547
+++V+ L
Sbjct: 336 SELVEHL 342
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 268 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 319
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDW------ 372
+ ++ + HKN++ L+G CT ++ + ++ L+ +P GL++
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREP--PGLEYSYNPSH 141
Query: 373 -PTRK-------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK 424
P + A+ A G+EYL + K IHRDL A N+L+ ++ + DFGLA+
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 425 LVDAKLTHV-----TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ H+ TT R + +APE L + ++DV+ +G+ L E+ T
Sbjct: 199 ----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR-------DLK 364
E+ LI + H N++ L+G CT ++V + NLS R + +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 365 PGEKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
P + D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 184
Query: 422 LAKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
LA+ + V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG 238
Query: 481 RXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPM 540
R+L R+ Y + E M Q L C P RP
Sbjct: 239 ASPYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTF 289
Query: 541 AQVVKML 547
+++V+ L
Sbjct: 290 SELVEHL 296
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 280 IGQGGFGKVY---KGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FGKV +D T VAVK L+ P + +++E+ ++ H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCN 394
G C E+ L M+ + + LRD P + A G+ YLH Q
Sbjct: 82 KGCCEDQGEKSLQL-VMEYVPLG-SLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHSQ-- 136
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG--TMGHIAPEYLSTG 452
IHR+L A N+LLD++ + DFGLAK V + + G + APE L
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 453 KSSEKTDVFGYGITLLELVT 472
K +DV+ +G+TL EL+T
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR-------DLK 364
E+ LI + H N++ L+G CT ++V + NLS R + +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 365 PGEKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
P + D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 184
Query: 422 LAKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
LA+ + V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG 238
Query: 481 RXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPM 540
R+L R+ Y + E M Q L C P RP
Sbjct: 239 ASPYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTF 289
Query: 541 AQVVKML 547
+++V+ L
Sbjct: 290 SELVEHL 296
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 268 QLATDNFSESNIIGQGGFGKVY----KGVLSDN----TKVAVKRLQDYYSPGGEAAFQRE 319
+L D +G+G FG+V G+ D TKVAVK L+ + + E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDW---PTR 375
+ ++ + HKN++ L+G CT ++ + ++ L+ +P GL++ P+
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP--PGLEYSYNPSH 182
Query: 376 K-----------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK 424
A+ A G+EYL + K IHRDL A N+L+ ++ + DFGLA+
Sbjct: 183 NPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 425 LVDAKLTHV-----TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ H+ TT R + +APE L + ++DV+ +G+ L E+ T
Sbjct: 240 ----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + YS E F E +IS H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 391 EQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ L+ + V L+ L + ++ +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS------KFDEQRTATYI 119
Query: 382 T--AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
T A L Y H + ++IHRD+K N+LL E + DFG + V A + TT + G
Sbjct: 120 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 173
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
T+ ++ PE + EK D++ G+ E + G+
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHLISVAIHKNLLQ--LI 335
+G+GGF K ++ +D +V ++ P QRE + ++IH++L ++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKI----VPKSLLLKPHQREKMSMEISIHRSLAHQHVV 102
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
G+ + V+ ++ L L +L K L P + G +YLH
Sbjct: 103 GFHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 158
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++IHRDLK N+ L+++ E + DFGLA V D + V GT +IAPE LS
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSKKG 215
Query: 454 SSEKTDVFGYGITLLELVTGQRAIDFS 480
S + DV+ G + L+ G+ + S
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 119
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + DFG + V A + TT + GT+
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTL 173
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
F ++G G +G+VYKG ++A ++ D E Q L + H+N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 334 LIGYCTTSS------ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
G + + LV F SV +++ K +W + GL
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLS 143
Query: 388 YLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE 447
+LH+ K+IHRD+K N+LL +N E L DFG++ +D + T I GT +APE
Sbjct: 144 HLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPE 199
Query: 448 YLSTGKSSE-----KTDVFGYGITLLELVTG 473
++ ++ + K+D++ GIT +E+ G
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 13/200 (6%)
Query: 280 IGQGGFGKVY---KGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FGKV +D T VAVK L+ P + +++E+ ++ H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCN 394
G C E+ L M+ + + LRD P + A G+ YLH Q
Sbjct: 82 KGCCEDQGEKSLQL-VMEYVPLG-SLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHAQ-- 136
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG--TMGHIAPEYLSTG 452
IHR+L A N+LLD++ + DFGLAK V + + G + APE L
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 453 KSSEKTDVFGYGITLLELVT 472
K +DV+ +G+TL EL+T
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG+G +G VYK + A+K+++ + G + RE+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 339 TTSSERILVYPFM-QNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKI 397
T +LV+ + Q+L +L D+ G GL+ T K G+ Y H++ ++
Sbjct: 70 HTKKRLVLVFEHLDQDLK---KLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 398 IHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL-STGKSSE 456
+HRDLK N+L++ E + DFGLA+ + T +I T+ + AP+ L + K S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYST 180
Query: 457 KTDVFGYGITLLELVTG 473
D++ G E+V G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 121
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + DFG + V A + TT + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTL 175
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHLISVAIHKNLLQ--LI 335
+G+GGF K ++ +D +V ++ P QRE + ++IH++L ++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKI----VPKSLLLKPHQREKMSMEISIHRSLAHQHVV 78
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
G+ + V+ ++ L L +L K L P + G +YLH
Sbjct: 79 GFHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 134
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++IHRDLK N+ L+++ E + DFGLA V D + V GT +IAPE LS
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSKKG 191
Query: 454 SSEKTDVFGYGITLLELVTGQRAIDFS 480
S + DV+ G + L+ G+ + S
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 129/306 (42%), Gaps = 38/306 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D + +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLRDLK------P 365
E+ LI + H N++ L+G CT ++V + NLS R + + P
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 366 GEKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGL 422
+ D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFGL
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 423 AKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSR 481
A+ + V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGA 248
Query: 482 XXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMA 541
R+L R+ Y + E M Q L C P RP +
Sbjct: 249 SPYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTFS 299
Query: 542 QVVKML 547
++V+ L
Sbjct: 300 ELVEHL 305
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FGKVYK + + +A ++ D S + E+ +++ H N+++L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIH 399
+ ++ F +V + +L E+ L + V T L YLH+ KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 400 RDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSE--- 456
RDLKA NIL + + L DFG++ + + GT +APE + S +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 457 --KTDVFGYGITLLEL 470
K DV+ GITL+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR-------DLK 364
E+ LI + H N++ L+G CT ++V + NLS R + +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 365 PGEKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
P + D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 193
Query: 422 LAKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
LA+ + V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 194 LARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG 247
Query: 481 RXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPM 540
R+L R+ Y + E M Q L C P RP
Sbjct: 248 ASPYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTF 298
Query: 541 AQVVKML 547
+++V+ L
Sbjct: 299 SELVEHL 305
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 272 DNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIH 328
+NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 329 KNLLQLIGYCTTSSERILVYPFM-QNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
N+++L+ T ++ LV+ + Q+L L G+ P K F GL
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALT----GIPLPLIKSYLFQLLQGLA 116
Query: 388 YLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE 447
+ H +++HRDLK N+L++ L DFGLA+ + T ++ T+ + APE
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 448 YLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
L K S D++ G E+VT +RA+
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ DLK G+ P K F
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 168
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 121
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + DFG + V A + TT + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTL 175
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHLISVAIHKNLLQ--LI 335
+G+GGF K ++ +D +V ++ P QRE + ++IH++L ++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKI----VPKSLLLKPHQREKMSMEISIHRSLAHQHVV 104
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
G+ + V+ ++ L L +L K L P + G +YLH
Sbjct: 105 GFHGFFEDNDFVFVVLE-LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 160
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++IHRDLK N+ L+++ E + DFGLA V D + V GT +IAPE LS
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSKKG 217
Query: 454 SSEKTDVFGYGITLLELVTGQRAIDFS 480
S + DV+ G + L+ G+ + S
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 278 NIIGQGGFGKVYKGVL-----SDNTKVAVKRLQDYYSPGGEAAFQREV-HLISVAI--HK 329
++G G FG V+KGV S V +K ++D G +FQ H++++ H
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK---SGRQSFQAVTDHMLAIGSLDHA 93
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYL 389
++++L+G C SS +++ Q L + L ++ L A G+ YL
Sbjct: 94 HIVRLLGLCPGSSLQLVT----QYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 149
Query: 390 HEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV---DAKLTHVTTQIRGTMGHIAP 446
E ++HR+L A N+LL + + DFG+A L+ D +L + ++ + + +A
Sbjct: 150 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY--SEAKTPIKWMAL 204
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E + GK + ++DV+ YG+T+ EL+T
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 64 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 119
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L Y H + ++IHRD+K N+LL E + DFG + V A + TT + GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDYL 173
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
PE + EK D++ G+ E + G+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 23/217 (10%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 327 IHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-----GEKGLDWPTRKRVAFG 381
H N+++L+ T ++ LV+ F+ DLK G+ P K F
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
GL + H +++HRDLK N+L++ L DFGLA+ + ++ T+
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 442 GHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
+ APE L K S D++ G E+VT +RA+
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 13/215 (6%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQRE 319
++ Q A ++F +G+G FG VY + + A+K L G E +RE
Sbjct: 2 ESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVA 379
V + S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
A L Y H + ++IHRD+K N+LL E + DFG + V A + TT + G
Sbjct: 119 -ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 171
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
T+ ++ PE + EK D++ G+ E + G+
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FGKVYK + + +A ++ D S + E+ +++ H N+++L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIH 399
+ ++ F +V + +L E+ L + V T L YLH+ KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 400 RDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSE--- 456
RDLKA NIL + + L DFG++ + + GT +APE + S +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPY 217
Query: 457 --KTDVFGYGITLLEL 470
K DV+ GITL+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 78 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 133
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + DFG + V A + TT + GT+
Sbjct: 134 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTL 187
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDN----TKVAVKRLQ-DYYSPGGEAAFQREVHLI 323
+ F+ ++G+G FG V + L KVAVK L+ D + F RE +
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 324 SVAIHKNLLQLIGYCTTSSER------ILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKR 377
H ++ +L+G S + +++ PFM++ + L + GE + P +
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 378 VAF--GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVT 434
V F A G+EYL + IHRDL A N +L ++ + DFGL+ K+
Sbjct: 140 VRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196
Query: 435 TQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ + +A E L+ + +DV+ +G+T+ E++T
Sbjct: 197 CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 278 NIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
IIG G G+V G L + VA+K L+ Y+ F E ++ H N+++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T ++V +M+N S+ LR + R G G+ YL +
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYLSDL- 170
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+HRDL A N+L+D N + DFGL++++ D + TT + + APE ++
Sbjct: 171 --GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF 228
Query: 452 GKSSEKTDVFGYGITLLE-LVTGQR 475
S +DV+ +G+ + E L G+R
Sbjct: 229 RTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 63 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 118
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L Y H + ++IHRD+K N+LL E + DFG + V A + TT + GT+ ++
Sbjct: 119 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDYL 172
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
PE + EK D++ G+ E + G+
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 87 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 142
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + DFG + V A + TT + GT+
Sbjct: 143 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTL 196
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 135/303 (44%), Gaps = 60/303 (19%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+F E +IG GGFG+V+K + K V R Y + E REV ++ H N++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIV 68
Query: 333 QLIG------YCTTSSERILVYPFM--QNLSVAYRLR------DLKPGEKGL--DWPTRK 376
G Y +S+ L +N + R + ++ +KG W ++
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 377 R-----------VAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKL 425
R + G++Y+H + K+IHRDLK +NI L D + + DFGL +
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGL--V 183
Query: 426 VDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV-TGQRAIDFSRXXX 484
K T+ +GT+ +++PE +S+ ++ D++ G+ L EL+ A + S+
Sbjct: 184 TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFT 243
Query: 485 XXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
LR+ ++DI D K+ +T++Q L PEDRP ++++
Sbjct: 244 D------------LRDGIISDIFD--------KKEKTLLQKLL---SKKPEDRPNTSEIL 280
Query: 545 KML 547
+ L
Sbjct: 281 RTL 283
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 278 NIIGQGGFGKVYKGVL-----SDNTKVAVKRLQDYYSPGGEAAFQREV-HLISVAI--HK 329
++G G FG V+KGV S V +K ++D G +FQ H++++ H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK---SGRQSFQAVTDHMLAIGSLDHA 75
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYL 389
++++L+G C SS +++ Q L + L ++ L A G+ YL
Sbjct: 76 HIVRLLGLCPGSSLQLVT----QYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 131
Query: 390 HEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV---DAKLTHVTTQIRGTMGHIAP 446
E ++HR+L A N+LL + + DFG+A L+ D +L + ++ + + +A
Sbjct: 132 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY--SEAKTPIKWMAL 186
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E + GK + ++DV+ YG+T+ EL+T
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG+G +G VYK + A+K+++ + G + RE+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 339 TTSSERILVYPFM-QNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKI 397
T +LV+ + Q+L +L D+ G GL+ T K G+ Y H++ ++
Sbjct: 70 HTKKRLVLVFEHLDQDLK---KLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 398 IHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL-STGKSSE 456
+HRDLK N+L++ E + DFGLA+ + T ++ T+ + AP+ L + K S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 457 KTDVFGYGITLLELVTG 473
D++ G E+V G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 57/229 (24%)
Query: 278 NIIGQGGFGKVYKGVLSDN---TKVAVKRLQDYYSPGGEAAFQREVH-LISVAIHKNLLQ 333
++IG+G FG+V K + + A+KR+++Y S F E+ L + H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV--------------- 378
L+G C R +Y L++ Y P LD+ + RV
Sbjct: 88 LLGAC---EHRGYLY-----LAIEY-----APHGNLLDFLRKSRVLETDPAFAIANSTAS 134
Query: 379 ----------AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDA 428
A A G++YL ++ + IHR+L A NIL+ +N+ A + DFGL++ +
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQE- 190
Query: 429 KLTHVTTQIRGTMGHI-----APEYLSTGKSSEKTDVFGYGITLLELVT 472
++ TMG + A E L+ + +DV+ YG+ L E+V+
Sbjct: 191 ------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 40/300 (13%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAAFQRE 319
E +++ + + +GQG FG VY+G D T+VAVK + + S F E
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 71
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRK 376
++ ++++L+G + ++V M + + LR L+P G PT +
Sbjct: 72 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 131
Query: 377 ---RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++A A G+ YL+ + K +HR+L A N ++ +F + DFG+ + +
Sbjct: 132 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYET 184
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXX 488
+G G +APE L G + +D++ +G+ L E+ +
Sbjct: 185 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------- 228
Query: 489 XXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
+ L E L ++D E + + +C Q P RP ++V +L+
Sbjct: 229 LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 68 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 123
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L Y H + ++IHRD+K N+LL E + DFG + V A + TT + GT+ ++
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDYL 177
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
PE + EK D++ G+ E + G+
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 40/300 (13%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVYKGVLSD------NTKVAVKRLQDYYSPGGEAAFQRE 319
E +++ + + +GQG FG VY+G D T+VAVK + + S F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRK 376
++ ++++L+G + ++V M + + LR L+P G PT +
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 377 ---RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV 433
++A A G+ YL+ + K +HR+L A N ++ +F + DFG+ + +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYET 183
Query: 434 TTQIRGTMG-----HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXX 488
+G G +APE L G + +D++ +G+ L E+ +
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------- 227
Query: 489 XXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKMLQ 548
+ L E L ++D E + + +C Q P RP ++V +L+
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR-------DLK 364
E+ LI + H N++ L+G CT ++V + NLS R +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 365 PGEKGLDWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
P + D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFG
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 195
Query: 422 LAKLVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFS 480
LA+ + +V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 196 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LG 249
Query: 481 RXXXXXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPM 540
R+L R+ Y + E M Q L C P RP
Sbjct: 250 ASPYPGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTF 300
Query: 541 AQVVKML 547
+++V+ L
Sbjct: 301 SELVEHL 307
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG+G +G VYK + A+K+++ + G + RE+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 339 TTSSERILVYPFM-QNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKI 397
T +LV+ + Q+L +L D+ G GL+ T K G+ Y H++ ++
Sbjct: 70 HTKKRLVLVFEHLDQDLK---KLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 398 IHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL-STGKSSE 456
+HRDLK N+L++ E + DFGLA+ + T ++ T+ + AP+ L + K S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 457 KTDVFGYGITLLELVTG 473
D++ G E+V G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 23/204 (11%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + KVA+K+L + + S RE+ L+ H+N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 338 CTTSS------ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHE 391
T +S + LV PFMQ + ++ LK E+ + + + + GL+Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQ--TDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIH- 143
Query: 392 QCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY-LS 450
+ ++HRDLK N+ ++++ E + DFGLA+ DA++T T + APE LS
Sbjct: 144 --SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYRAPEVILS 197
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
++ D++ G + E++TG+
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + A+K L G E +REV + S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 61 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 116
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L Y H + ++IHRD+K N+LL E + DFG + V A + TT + GT+ ++
Sbjct: 117 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDYL 170
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
PE + EK D++ G+ E + G+
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 28/203 (13%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FG V G VA+K +++ E F E ++ H+ L+QL G CT
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC------ 393
++ +M N + LR++ R F T LE + C
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM-------------RHRFQTQQLLEMCKDVCEAMEYL 121
Query: 394 -NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI---APEYL 449
+ + +HRDL A N L++D + DFGL++ V L T RG+ + PE L
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYTSSRGSKFPVRWSPPEVL 178
Query: 450 STGKSSEKTDVFGYGITLLELVT 472
K S K+D++ +G+ + E+ +
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 64 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 119
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L Y H + ++IHRD+K N+LL E + DFG + V A + T++ GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR-RTELCGTLDYL 173
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
PE + EK D++ G+ E + G+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQ----REVHLI- 323
+AT + IG G +G VYK D L+ P GE REV L+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLR 58
Query: 324 --SVAIHKNLLQLIGYCTTS--SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVA 379
H N+++L+ C TS I V +++ R K GL T K +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
GL++LH C I+HRDLK NIL+ L DFGLA++ ++ +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-- 173
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLEL 470
T+ + APE L + D++ G E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 280 IGQGGFGKVYKGV--LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G+G + VYKG L+DN VA+K ++ + G REV L+ H N++ L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKI 397
T LV+ ++ Y L ++ K F GL Y H Q K+
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQY----LDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KV 121
Query: 398 IHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YLSTGKSSE 456
+HRDLK N+L+++ E L DFGLA+ ++ T+ + P+ L + S
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYST 180
Query: 457 KTDVFGYGITLLELVTGQ 474
+ D++G G E+ TG+
Sbjct: 181 QIDMWGVGCIFYEMATGR 198
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 280 IGQGGFGKV---YKGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FGKV DNT +VAVK L+ A ++E+ ++ H+N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 335 IGYCTTSSER--ILVYPFMQNLSVAYRLRDLKPGEKG-LDWPTRKRVAFGTAYGLEYLHE 391
G CT L+ F+ + S L++ P K ++ + + A G++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGS----LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 392 QCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYL 449
+ + +HRDL A N+L++ + + DFGL K + D + V + APE L
Sbjct: 133 R---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 450 STGKSSEKTDVFGYGITLLELVT 472
K +DV+ +G+TL EL+T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ + + T + A
Sbjct: 68 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT-ELAN 123
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L Y H + ++IHRD+K N+LL N E + DFG + V A + TT + GT+ ++
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTT-LCGTLDYL 177
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + EK D++ G+ E + G
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 14/218 (6%)
Query: 265 RELQLATDNFSESNI-IGQGGFGKVYKGVLSDNTK---VAVKRLQDYYSPGGEAAFQREV 320
++L L DN ++I +G G FG V +GV K VA+K L+ RE
Sbjct: 328 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 387
Query: 321 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF 380
++ + +++LIG C +E +++ M ++ K E + +
Sbjct: 388 QIMHQLDNPYIVRLIGVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLH 443
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG- 439
+ G++YL E+ +HR+L A N+LL + A + DFGL+K + A ++ T + G
Sbjct: 444 QVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 500
Query: 440 -TMGHIAPEYLSTGKSSEKTDVFGYGITLLE-LVTGQR 475
+ APE ++ K S ++DV+ YG+T+ E L GQ+
Sbjct: 501 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 538
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQ----REVHLI- 323
+AT + IG G +G VYK D L+ P GE REV L+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLR 58
Query: 324 --SVAIHKNLLQLIGYCTTS--SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVA 379
H N+++L+ C TS I V +++ R K GL T K +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
GL++LH C I+HRDLK NIL+ L DFGLA++ ++ +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-- 173
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLEL 470
T+ + APE L + D++ G E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 35/303 (11%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNTK--VAVKRLQDYYSPGGEAA 315
+ + + D + +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR--DLKPGEKG 369
E+ LI + H N++ L+G CT ++V + NLS R + + P +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 370 L-DWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKL 425
D+ T + + +F A G+E+L + K IHRDL A NILL + +CDFGLA+
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARD 193
Query: 426 VDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXX 484
+ +V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPY 247
Query: 485 XXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
R+L R+ Y + E M Q L C P RP +++V
Sbjct: 248 PGVKIDEEFCRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTFSELV 298
Query: 545 KML 547
+ L
Sbjct: 299 EHL 301
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 280 IGQGGFGKV---YKGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FGKV DNT +VAVK L+ A ++E+ ++ H+N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 335 IGYCTTSSER--ILVYPFMQNLSVAYRLRDLKPGEKG-LDWPTRKRVAFGTAYGLEYLHE 391
G CT L+ F+ + S L++ P K ++ + + A G++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGS----LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 392 QCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYL 449
+ + +HRDL A N+L++ + + DFGL K + D + V + APE L
Sbjct: 145 R---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 450 STGKSSEKTDVFGYGITLLELVT 472
K +DV+ +G+TL EL+T
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 117
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + DFG + A + TT + GT+
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTT-LSGTL 171
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 104/240 (43%), Gaps = 32/240 (13%)
Query: 256 LTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVL------SDNTKVAVKRLQDYYS 309
+ Q ++ +E+ L+ F E +G+ FGKVYKG L VA+K L+D
Sbjct: 12 INQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE 69
Query: 310 PGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQ--NLSVAYRLR------ 361
F+ E L + H N++ L+G T +++ + +L +R
Sbjct: 70 GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV 129
Query: 362 ----DLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL 417
D + + L+ P + A G+EYL ++H+DL N+L+ D +
Sbjct: 130 GSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI 186
Query: 418 CDFGLAKLVDAK-----LTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
D GL + V A L + IR +APE + GK S +D++ YG+ L E+ +
Sbjct: 187 SDLGLFREVYAADYYKLLGNSLLPIRW----MAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 278 NIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
IIG G G+V G L + VA+K L+ Y+ F E ++ H N+++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T ++V +M+N S+ LR + R G G+ YL +
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR---GVGAGMRYLSDL- 170
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQIRGTMGHIAPEYLST 451
+HRDL A N+L+D N + DFGL++++ D TT + + APE ++
Sbjct: 171 --GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAF 228
Query: 452 GKSSEKTDVFGYGITLLE-LVTGQR 475
S +DV+ +G+ + E L G+R
Sbjct: 229 RTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 116
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + DFG + V A + T + GT+
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR-RTDLCGTL 170
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 117
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + DFG + V A + T + GT+
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR-RTDLCGTL 171
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 18/251 (7%)
Query: 232 YQKLRKLKHDVFFDVAGEDDC--KVSLTQLRRFSCRELQLATDN-FSESNIIGQGGFGKV 288
+Q+L +L H+ + VA D + + ++ E Q T N F + ++G+GGFG+V
Sbjct: 142 FQELTRLTHE-YLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEV 200
Query: 289 YKGVLSDNTKVAV---KRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERI 345
+ K+ + GEA E ++ + ++ L T
Sbjct: 201 CACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260
Query: 346 LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY--GLEYLHEQCNPKIIHRDLK 403
LV M + + + + G+ G +P + V + GLE LH + +I++RDLK
Sbjct: 261 LVLTLMNGGDLKFHIYHM--GQAG--FPEARAVFYAAEICCGLEDLHRE---RIVYRDLK 313
Query: 404 AANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGY 463
NILLDD+ + D GLA V T + ++ GT+G++APE + + + D +
Sbjct: 314 PENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 464 GITLLELVTGQ 474
G L E++ GQ
Sbjct: 372 GCLLYEMIAGQ 382
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 121
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + DFG + V A + T + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR-RTDLCGTL 175
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 64 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 119
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L Y H + ++IHRD+K N+LL E + DFG + V A + T + GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR-RTDLCGTLDYL 173
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
PE + EK D++ G+ E + G+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDY----YSPGGEAAFQREVHL 322
+ L ++FS IIG+GGFG+VY +D K+ + D G A + L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 323 ISVAIHK-NLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV-A 379
V+ + + Y + +++ + M + Y L + G+ R A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYA 298
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
GLE++H N +++RDLK ANILLD++ + D GLA K H + G
Sbjct: 299 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---G 352
Query: 440 TMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
T G++APE L G + + + D F G L +L+ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDY----YSPGGEAAFQREVHL 322
+ L ++FS IIG+GGFG+VY +D K+ + D G A + L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 323 ISVAIHK-NLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV-A 379
V+ + + Y + +++ + M + Y L + G+ R A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYA 298
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
GLE++H N +++RDLK ANILLD++ + D GLA K H + G
Sbjct: 299 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---G 352
Query: 440 TMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
T G++APE L G + + + D F G L +L+ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 38/226 (16%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHL-ISV 325
++L D+F + + +G G G V+K + P G ++ +HL I
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---------------VSHKPSGLVMARKLIHLEIKP 45
Query: 326 AIHKNL---LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
AI + LQ++ C + F + ++ + + G LD +K
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPE 103
Query: 377 ----RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLT 431
+V+ GL YL E+ KI+HRD+K +NIL++ E LCDFG++ +L+D+
Sbjct: 104 QILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158
Query: 432 HVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAI 477
+ GT +++PE L S ++D++ G++L+E+ G+ I
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 38/226 (16%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHL-ISV 325
++L D+F + + +G G G V+K + P G ++ +HL I
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---------------VSHKPSGLVMARKLIHLEIKP 45
Query: 326 AIHKNL---LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
AI + LQ++ C + F + ++ + + G LD +K
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPE 103
Query: 377 ----RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLT 431
+V+ GL YL E+ KI+HRD+K +NIL++ E LCDFG++ +L+D+
Sbjct: 104 QILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158
Query: 432 HVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAI 477
+ GT +++PE L S ++D++ G++L+E+ G+ I
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 38/226 (16%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHL-ISV 325
++L D+F + + +G G G V+K + P G ++ +HL I
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---------------VSHKPSGLVMARKLIHLEIKP 45
Query: 326 AIHKNL---LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
AI + LQ++ C + F + ++ + + G LD +K
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPE 103
Query: 377 ----RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLT 431
+V+ GL YL E+ KI+HRD+K +NIL++ E LCDFG++ +L+D+
Sbjct: 104 QILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158
Query: 432 HVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAI 477
+ GT +++PE L S ++D++ G++L+E+ G+ I
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 280 IGQGGFGKVY---KGVLSDNT--KVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+G+G FGKV +D T VAVK L+ P + +++E+ ++ H+++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCN 394
G C + L M+ + + LRD P + A G+ YLH Q
Sbjct: 99 KGCCEDAGAASLQL-VMEYVPLG-SLRDYLP-RHSIGLAQLLLFAQQICEGMAYLHAQ-- 153
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR----GTMGHIAPEYLS 450
IHRDL A N+LLD++ + DFGLAK V H ++R + APE L
Sbjct: 154 -HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE--GHEXYRVREDGDSPVFWYAPECLK 210
Query: 451 TGKSSEKTDVFGYGITLLELVT 472
K +DV+ +G+TL EL+T
Sbjct: 211 EYKFYYASDVWSFGVTLYELLT 232
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 38/226 (16%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHL-ISV 325
++L D+F + + +G G G V+K + P G ++ +HL I
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---------------VSHKPSGLVMARKLIHLEIKP 45
Query: 326 AIHKNL---LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
AI + LQ++ C + F + ++ + + G LD +K
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPE 103
Query: 377 ----RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLT 431
+V+ GL YL E+ KI+HRD+K +NIL++ E LCDFG++ +L+D+
Sbjct: 104 QILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158
Query: 432 HVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAI 477
+ GT +++PE L S ++D++ G++L+E+ G+ I
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVYKGVLSD-NTKVAVKRLQD--YYSPGGEAAFQREVHL 322
+++L ++F ++G+G FGKV+ N A+K L+ E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
+S+A L + +CT ++ L + M+ L+ + ++ K D A
Sbjct: 72 LSLAWEHPFLTHM-FCTFQTKENLFF-VMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEI 128
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK---LVDAKLTHVTTQIRG 439
GL++LH + I++RDLK NILLD + + DFG+ K L DAK T + G
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK----TNEFCG 181
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
T +IAPE L K + D + +G+ L E++ GQ
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 118
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + +FG + V A + TT + GT+
Sbjct: 119 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-LCGTL 172
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 280 IGQGGFGKVYKG------VLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G+G FGKV+ D VAVK L+D + FQRE L++ H+++++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNLQHEHIVK 81
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP--------------GEKGLDWPTRKRVA 379
G C I+V+ +M++ + LR P GE GL +A
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS--QMLHIA 139
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
A G+ YL Q +HRDL N L+ N + DFG+++ V +T
Sbjct: 140 SQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDV------YSTDYYR 190
Query: 440 TMGH-------IAPEYLSTGKSSEKTDVFGYGITLLELVT 472
GH + PE + K + ++DV+ +G+ L E+ T
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 318
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
E + H ++++LIG T + V+ M+ ++ L+ + LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILY 116
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A+ + L YL + + +HRD+ A N+L+ N L DFGL++ ++ + ++ +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
+ +APE ++ + + +DV+ +G+ + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 18/251 (7%)
Query: 232 YQKLRKLKHDVFFDVAGEDDC--KVSLTQLRRFSCRELQLATDN-FSESNIIGQGGFGKV 288
+Q+L +L H+ + VA D + + ++ E Q T N F + ++G+GGFG+V
Sbjct: 142 FQELTRLTHE-YLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEV 200
Query: 289 YKGVLSDNTKV---AVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERI 345
+ K+ + GEA E ++ + ++ L T
Sbjct: 201 CACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260
Query: 346 LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY--GLEYLHEQCNPKIIHRDLK 403
LV M + + + + G+ G +P + V + GLE LH + +I++RDLK
Sbjct: 261 LVLTLMNGGDLKFHIYHM--GQAG--FPEARAVFYAAEICCGLEDLHRE---RIVYRDLK 313
Query: 404 AANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGY 463
NILLDD+ + D GLA V T + ++ GT+G++APE + + + D +
Sbjct: 314 PENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 464 GITLLELVTGQ 474
G L E++ GQ
Sbjct: 372 GCLLYEMIAGQ 382
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDY----YSPGGEAAFQREVHL 322
+ L ++FS IIG+GGFG+VY +D K+ + D G A + L
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 323 ISVAIHK-NLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV-A 379
V+ + + Y + +++ + M + Y L + G+ R A
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYA 297
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
GLE++H N +++RDLK ANILLD++ + D GLA K H + G
Sbjct: 298 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---G 351
Query: 440 TMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
T G++APE L G + + + D F G L +L+ G
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 387
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQR 318
++ Q A ++F +G+G FG VY + + A+K L G E +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
EV + S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A L Y H + ++IHRD+K N+LL E + +FG + V A + TT +
Sbjct: 118 T-ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-LC 170
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
GT+ ++ PE + EK D++ G+ E + G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDY----YSPGGEAAFQREVHL 322
+ L ++FS IIG+GGFG+VY +D K+ + D G A + L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 323 ISVAIHK-NLLQLIGYCTTSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV-A 379
V+ + + Y + +++ + M + Y L + G+ R A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYA 298
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
GLE++H N +++RDLK ANILLD++ + D GLA K H + G
Sbjct: 299 AEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---G 352
Query: 440 TMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
T G++APE L G + + + D F G L +L+ G
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 12/211 (5%)
Query: 272 DNFSESNIIGQGGFGKVYKG-VLSDNTKVAVKRL--QDYYSPGGEAAFQREVHLISVAIH 328
++F N++G+G F VY+ + +VA+K + + Y G Q EV + H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
++L+L Y S+ LV N + R LK K + G+ Y
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMN---RYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVT-TQIRGTMGHIAPE 447
LH I+HRDL +N+LL N + DFGLA K+ H + GT +I+PE
Sbjct: 128 LHSH---GILHRDLTLSNLLLTRNMNIKIADFGLA--TQLKMPHEKHYTLCGTPNYISPE 182
Query: 448 YLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
+ ++DV+ G L+ G+ D
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FG V G VA+K +++ E F E ++ H+ L+QL G CT
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC------ 393
++ +M N + LR++ R F T LE + C
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM-------------RHRFQTQQLLEMCKDVCEAMEYL 136
Query: 394 -NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQ--IRGTMGHIAPEY 448
+ + +HRDL A N L++D + DFGL++ V D + + V ++ +R + PE
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWS----PPEV 192
Query: 449 LSTGKSSEKTDVFGYGITLLELVT 472
L K S K+D++ +G+ + E+ +
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 377 RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTT 435
++ T L +L E N KIIHRD+K +NILLD + LCDFG++ +LVD + T
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD---SIAKT 183
Query: 436 QIRGTMGHIAPEYLSTGKSSE----KTDVFGYGITLLELVTGQ 474
+ G ++APE + S + ++DV+ GITL EL TG+
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQ----REVHLI- 323
+AT + IG G +G VYK D L+ P GE REV L+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLR 58
Query: 324 --SVAIHKNLLQLIGYCTTS--SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVA 379
H N+++L+ C TS I V +++ R K GL T K +
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
GL++LH C I+HRDLK NIL+ L DFGLA++ ++ +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPVVV 173
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLEL 470
T+ + APE L + D++ G E+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 38/226 (16%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHL-ISV 325
++L D+F + + +G G G V+K + P G ++ +HL I
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK---------------VSHKPSGLVMARKLIHLEIKP 45
Query: 326 AIHKNL---LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
AI + LQ++ C + F + ++ + + G LD +K
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPE 103
Query: 377 ----RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLT 431
+V+ GL YL E+ KI+HRD+K +NIL++ E LCDFG++ +L+D+
Sbjct: 104 QILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 158
Query: 432 HVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAI 477
+ GT +++PE L S ++D++ G++L+E+ G+ I
Sbjct: 159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 64 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 119
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L Y H + ++IHRD+K N+LL E + DFG + V A + T + GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR-RTXLCGTLDYL 173
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
PE + EK D++ G+ E + G+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 318
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
E + H ++++LIG T + V+ M+ ++ L+ + LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILY 116
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A+ + L YL + + +HRD+ A N+L+ N L DFGL++ ++ + ++ +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
+ +APE ++ + + +DV+ +G+ + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 117
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
A L Y H + ++IHRD+K N+LL E + DFG + V A + T + GT+
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDT-LCGTL 171
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++ PE + EK D++ G+ E + G+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 129/291 (44%), Gaps = 49/291 (16%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+F E +IG GGFG+V+K + K V + Y + E REV ++ H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIV 67
Query: 333 QLIG------YCTTSSERILVYPFMQNLSVAYRLRDL---------KPGEKGLDWPTRKR 377
G Y +S + + L + D + GEK LD
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKVLALE 126
Query: 378 VAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQI 437
+ G++Y+H + K+I+RDLK +NI L D + + DFGL + K +
Sbjct: 127 LFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXRS 181
Query: 438 RGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV-TGQRAIDFSRXXXXXXXXXXXHIRK 496
+GT+ +++PE +S+ ++ D++ G+ L EL+ A + S+
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTD----------- 230
Query: 497 LLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
LR+ ++DI D K+ +T++Q L PEDRP +++++ L
Sbjct: 231 -LRDGIISDIFD--------KKEKTLLQKLL---SKKPEDRPNTSEILRTL 269
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 318
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
E + H ++++LIG T + V+ M+ ++ L+ + LD +
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILY 121
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A+ + L YL + + +HRD+ A N+L+ N L DFGL++ ++ + ++ +
Sbjct: 122 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
+ +APE ++ + + +DV+ +G+ + E++
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 17/218 (7%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQR 318
++ Q A ++F +G+G FG VY + + A+K L G E +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
EV + S H N+L+L GY ++ L+ + V L+ L + ++
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS------KFDEQRTA 116
Query: 379 AFGT--AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ 436
+ T A L Y H + ++IHRD+K N+LL E + DFG + V A +
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSR-RXX 170
Query: 437 IRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+ GT+ ++ PE + EK D++ G+ E + G+
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 118
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR--- 438
A L Y H + ++IHRD+K N+LL E + DFG + H + R
Sbjct: 119 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 168
Query: 439 -GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
GT+ ++ PE + EK D++ G+ E + G+
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG+G FG V G N KVAVK +++ AF E +++ H NL+QL+G
Sbjct: 14 IGKGEFGDVMLGDYRGN-KVAVKCIKN---DATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 340 TSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ +V +M S+ LR G L + + +EYL +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFV 124
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N+L+ ++ A + DFGL K +A T T ++ + APE L K S K+
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFSTKS 180
Query: 459 DVFGYGITLLELVTGQR 475
DV+ +GI L E+ + R
Sbjct: 181 DVWSFGILLWEIYSFGR 197
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 318
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
E + H ++++LIG T + V+ M+ ++ L+ + LD +
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILY 144
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A+ + L YL + + +HRD+ A N+L+ N L DFGL++ ++ + ++ +
Sbjct: 145 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 201
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
+ +APE ++ + + +DV+ +G+ + E++
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTK--VAVKRLQDYYSPGG-------EAAFQREVHLISVAIHKN 330
IG+G +GKV+K N VA+KR++ G E A R + H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE---HPN 75
Query: 331 LLQLIGYCTTS-----SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYG 385
+++L CT S ++ LV+ + Y D P E G+ T K + F G
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVP-EPGVPTETIKDMMFQLLRG 132
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
L++LH +++HRDLK NIL+ + + L DFGLA++ ++ T + T+ + A
Sbjct: 133 LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRA 187
Query: 446 PEYLSTGKSSEKTDVFGYGITLLEL 470
PE L + D++ G E+
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG+G FG V G N KVAVK +++ AF E +++ H NL+QL+G
Sbjct: 29 IGKGEFGDVMLGDYRGN-KVAVKCIKN---DATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 340 TSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ +V +M S+ LR G L + + +EYL +
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFV 139
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N+L+ ++ A + DFGL K +A T T ++ + APE L K S K+
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFSTKS 195
Query: 459 DVFGYGITLLELVTGQR 475
DV+ +GI L E+ + R
Sbjct: 196 DVWSFGILLWEIYSFGR 212
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 391 EQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 391 EQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHL-ISVA 326
+L D+F + + +G G G V+K + P G ++ +HL I A
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFK---------------VSHKPSGLVMARKLIHLEIKPA 73
Query: 327 IHKNL---LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------- 376
I + LQ++ C + F + ++ + + G LD +K
Sbjct: 74 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG--SLDQVLKKAGRIPEQ 131
Query: 377 ---RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTH 432
+V+ GL YL E+ KI+HRD+K +NIL++ E LCDFG++ +L+D+
Sbjct: 132 ILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 185
Query: 433 VTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAI 477
+ GT +++PE L S ++D++ G++L+E+ G+ I
Sbjct: 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 318
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
E + H ++++LIG T + V+ M+ ++ L+ + LD +
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILY 119
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A+ + L YL + + +HRD+ A N+L+ N L DFGL++ ++ + ++ +
Sbjct: 120 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 176
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
+ +APE ++ + + +DV+ +G+ + E++
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 318
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
E + H ++++LIG T + V+ M+ ++ L+ + LD +
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILY 118
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A+ + L YL + + +HRD+ A N+L+ N L DFGL++ ++ + ++ +
Sbjct: 119 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 175
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
+ +APE ++ + + +DV+ +G+ + E++
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 391 EQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTK--VAVKRLQDYYSPGG-------EAAFQREVHLISVAIHKN 330
IG+G +GKV+K N VA+KR++ G E A R + H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE---HPN 75
Query: 331 LLQLIGYCTTS-----SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYG 385
+++L CT S ++ LV+ + Y D P E G+ T K + F G
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVP-EPGVPTETIKDMMFQLLRG 132
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
L++LH +++HRDLK NIL+ + + L DFGLA++ ++ T + T+ + A
Sbjct: 133 LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRA 187
Query: 446 PEYLSTGKSSEKTDVFGYGITLLEL 470
PE L + D++ G E+
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 391 EQCNPKIIHRDLKAANILLD---DNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 67 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 122
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR----GT 440
L Y H + ++IHRD+K N+LL E + DFG + H + R GT
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGT 172
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ PE + EK D++ G+ E + G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 64 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 119
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR----GT 440
L Y H + ++IHRD+K N+LL E + DFG + H + R GT
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGT 169
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ PE + EK D++ G+ E + G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 87 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 142
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR--- 438
A L Y H + ++IHRD+K N+LL E + DFG + H + R
Sbjct: 143 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDL 192
Query: 439 -GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
GT+ ++ PE + EK D++ G+ E + G+
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVH 321
++ Q A ++F +G+G FG VY + + A+K L G E +REV
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+ S H N+L+L GY ++ VY ++ + R+L+ K + T +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-E 119
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR--- 438
A L Y H + ++IHRD+K N+LL E + DFG + H + R
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 169
Query: 439 -GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
GT+ ++ PE + EK D++ G+ E + G+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FG V G VA+K +++ E F E ++ H+ L+QL G CT
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC------ 393
++ +M N + LR++ R F T LE + C
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM-------------RHRFQTQQLLEMCKDVCEAMEYL 121
Query: 394 -NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQ--IRGTMGHIAPEY 448
+ + +HRDL A N L++D + DFGL++ V D + V ++ +R + PE
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS----PPEV 177
Query: 449 LSTGKSSEKTDVFGYGITLLELVT 472
L K S K+D++ +G+ + E+ +
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHL-ISVA 326
+L D+F + + +G G G V+K + P G ++ +HL I A
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFK---------------VSHKPSGLVMARKLIHLEIKPA 65
Query: 327 IHKNL---LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------- 376
I + LQ++ C + F + ++ + + G LD +K
Sbjct: 66 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQ 123
Query: 377 ---RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTH 432
+V+ GL YL E+ KI+HRD+K +NIL++ E LCDFG++ +L+D+
Sbjct: 124 ILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 177
Query: 433 VTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAI 477
+ GT +++PE L S ++D++ G++L+E+ G+ I
Sbjct: 178 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 391 EQCNPKIIHRDLKAANILLD---DNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 270 ATDNFSESNIIGQGGFGKVYKG--VLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVA 326
+ +NF + IG+G +G VYK L+ VA+K+++ D + G + RE+ L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 327 IHKNLLQLIGYCTTSSERILVYPFM-QNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYG 385
H N+++L+ T ++ LV+ + Q+L L G+ P K F G
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALT----GIPLPLIKSYLFQLLQG 118
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
L + H +++HRDLK N+L++ L DFGLA+ + ++ T+ + A
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 174
Query: 446 PEYLSTGK-SSEKTDVFGYGITLLELVTGQRAI 477
PE L K S D++ G E+VT +RA+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 391 EQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 67 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 122
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR----GT 440
L Y H + ++IHRD+K N+LL E + DFG + H + R GT
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGT 172
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ PE + EK D++ G+ E + G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 23/204 (11%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + KVA+K+L + + S RE+ L+ H+N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 338 CTTSS------ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHE 391
T +S + LV PFMQ + ++ ++ E+ + + + + GL+Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQ--TDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIH- 161
Query: 392 QCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY-LS 450
+ ++HRDLK N+ ++++ E + DFGLA+ DA++T T + APE LS
Sbjct: 162 --SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYRAPEVILS 215
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
++ D++ G + E++TG+
Sbjct: 216 WMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 32/215 (14%)
Query: 280 IGQGGFGKVYKGVL------SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G+G FGKV+ D VAVK L+D S F RE L++ H+++++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVK 79
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGL---DWPTR------KRVAFGTAY 384
G C I+V+ +M++ + LR P + + PT +A A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH- 443
G+ YL Q +HRDL N L+ +N + DFG+++ V +T GH
Sbjct: 140 GMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDV------YSTDYYRVGGHT 190
Query: 444 ------IAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ PE + K + ++DV+ G+ L E+ T
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 42/237 (17%)
Query: 256 LTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAA 315
LTQ ++ +L D+F + + +G G G V+K + P G
Sbjct: 56 LTQKQKVG----ELKDDDFEKISELGAGNGGVVFK---------------VSHKPSGLVM 96
Query: 316 FQREVHL-ISVAIHKNL---LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLD 371
++ +HL I AI + LQ++ C + F + ++ + + G LD
Sbjct: 97 ARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LD 154
Query: 372 WPTRK----------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG 421
+K +V+ GL YL E+ KI+HRD+K +NIL++ E LCDFG
Sbjct: 155 QVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFG 212
Query: 422 LA-KLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAI 477
++ +L+D+ + GT +++PE L S ++D++ G++L+E+ G+ I
Sbjct: 213 VSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FG V G VA+K +++ E F E ++ H+ L+QL G CT
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC------ 393
++ +M N + LR++ R F T LE + C
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREM-------------RHRFQTQQLLEMCKDVCEAMEYL 120
Query: 394 -NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQ--IRGTMGHIAPEY 448
+ + +HRDL A N L++D + DFGL++ V D + V ++ +R + PE
Sbjct: 121 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS----PPEV 176
Query: 449 LSTGKSSEKTDVFGYGITLLELVT 472
L K S K+D++ +G+ + E+ +
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 391 EQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTK--VAVKRLQDYYSPGG-------EAAFQREVHLISVAIHKN 330
IG+G +GKV+K N VA+KR++ G E A R + H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE---HPN 75
Query: 331 LLQLIGYCTTS-----SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYG 385
+++L CT S ++ LV+ + Y D P E G+ T K + F G
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL--DKVP-EPGVPTETIKDMMFQLLRG 132
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
L++LH +++HRDLK NIL+ + + L DFGLA++ ++ T + T+ + A
Sbjct: 133 LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRA 187
Query: 446 PEYLSTGKSSEKTDVFGYGITLLEL 470
PE L + D++ G E+
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q A ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ K + T + A
Sbjct: 64 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELAN 119
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR----GT 440
L Y H + ++IHRD+K N+LL E + DFG + H + R GT
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGT 169
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ PE + EK D++ G+ E + G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG+G FG V G N KVAVK +++ AF E +++ H NL+QL+G
Sbjct: 201 IGKGEFGDVMLGDYRGN-KVAVKCIKN---DATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 340 TSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ +V +M S+ LR G L + + +EYL +
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFV 311
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N+L+ ++ A + DFGL K +A T T ++ + APE L K S K+
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFSTKS 367
Query: 459 DVFGYGITLLELVTGQR 475
DV+ +GI L E+ + R
Sbjct: 368 DVWSFGILLWEIYSFGR 384
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 391 EQCNPKIIHRDLKAANILLD---DNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 318
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
E + H ++++LIG T + V+ M+ ++ L+ + LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILY 116
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A+ + L YL + + +HRD+ A N+L+ N L DFGL++ ++ ++ +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGK 173
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
+ +APE ++ + + +DV+ +G+ + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FG V G VA+K +++ E F E ++ H+ L+QL G CT
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC------ 393
++ +M N + LR++ R F T LE + C
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREM-------------RHRFQTQQLLEMCKDVCEAMEYL 116
Query: 394 -NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQ--IRGTMGHIAPEY 448
+ + +HRDL A N L++D + DFGL++ V D + V ++ +R + PE
Sbjct: 117 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS----PPEV 172
Query: 449 LSTGKSSEKTDVFGYGITLLELVT 472
L K S K+D++ +G+ + E+ +
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQ----REVHLISVAIHKNLLQL 334
+G G +G V V KVA+K+L Y P F RE+ L+ H+N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKL---YRPFQSELFAKRAYRELRLLKHMRHENVIGL 89
Query: 335 IGYCTTS------SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
+ T ++ LV PFM + ++ K GE + + + + GL Y
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQF-----LVYQMLKGLRY 143
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
+H IIHRDLK N+ ++++ E + DFGLA+ D+++ T + APE
Sbjct: 144 IHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEV 196
Query: 449 -LSTGKSSEKTDVFGYGITLLELVTGQ 474
L+ + ++ D++ G + E++TG+
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 391 EQCNPKIIHRDLKAANILLD---DNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
+G+G +G+V++G VAVK +S E ++ RE L + + H+N+L I
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVK----IFSSRDEKSWFRETELYNTVMLRHENILGFIAS 99
Query: 338 CTTS---SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH---- 390
TS S ++ + + Y L LD + R+ A GL +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 391 -EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTH--VTTQIR-GTMGHIAP 446
Q P I HRDLK+ NIL+ N + + D GLA + V R GT ++AP
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 447 EYLSTG------KSSEKTDVFGYGITLLEL 470
E L S ++ D++ +G+ L E+
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FG V G VA+K +++ E F E ++ H+ L+QL G CT
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC------ 393
++ +M N + LR++ R F T LE + C
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM-------------RHRFQTQQLLEMCKDVCEAMEYL 136
Query: 394 -NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQ--IRGTMGHIAPEY 448
+ + +HRDL A N L++D + DFGL++ V D + V ++ +R + PE
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS----PPEV 192
Query: 449 LSTGKSSEKTDVFGYGITLLELVT 472
L K S K+D++ +G+ + E+ +
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 28/220 (12%)
Query: 280 IGQGGFGKV--YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G+GGF V +G L D A+KR+ + E A QRE + + H N+L+L+ Y
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEA-QREADMHRLFNHPNILRLVAY 94
Query: 338 CT----TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF---GTAYGLEYLH 390
C E L+ PF + ++ + LK +KG ++ T ++ + G GLE +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLK--DKG-NFLTEDQILWLLLGICRGLEAIH 151
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKL----VDAKLTHVTTQ----IRGTMG 442
+ HRDLK NILL D + VL D G V+ +T Q R T+
Sbjct: 152 AK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 443 HIAPEYLSTGKS---SEKTDVFGYGITLLELVTGQRAIDF 479
+ APE S E+TDV+ G L ++ G+ D
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 32/231 (13%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVL------SDNTKVAVKRLQDYYSPGGEAAFQR 318
+E+ L+ F E +G+ FGKVYKG L VA+K L+D F+
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQ--NLSVAYRLR----------DLKPG 366
E L + H N++ L+G T +++ + +L +R D +
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 367 EKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV 426
+ L+ P + A G+EYL ++H+DL N+L+ D + D GL + V
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 427 DAK-----LTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
A L + IR +APE + GK S +D++ YG+ L E+ +
Sbjct: 179 YAADYYKLLGNSLLPIRW----MAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 13/209 (6%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
Q ++F +G+G FG VY + + A+K L G E +REV + S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H N+L+L GY ++ VY ++ + R+L+ + + T + A
Sbjct: 68 HLRHPNILRLYGYFHDATR---VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT-ELAN 123
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L Y H + ++IHRD+K N+LL N E + DFG + V A + T + GT+ ++
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDT-LCGTLDYL 177
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + EK D++ G+ E + G
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 391 EQCNPKIIHRDLKAANILLD---DNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 391 EQCNPKIIHRDLKAANILLD---DNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
+G+G +G+V++G VAVK +S E ++ RE L + + H+N+L I
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK----IFSSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 338 CTTS---SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH---- 390
TS S ++ + + Y L LD + R+ A GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 391 -EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTH--VTTQIR-GTMGHIAP 446
Q P I HRDLK+ NIL+ N + + D GLA + V R GT ++AP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 447 EYLSTG------KSSEKTDVFGYGITLLEL 470
E L S ++ D++ +G+ L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
+G+G +G+V++G VAVK +S E ++ RE L + + H+N+L I
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK----IFSSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 338 CTTS---SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH---- 390
TS S ++ + + Y L LD + R+ A GL +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 391 -EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTH--VTTQIR-GTMGHIAP 446
Q P I HRDLK+ NIL+ N + + D GLA + V R GT ++AP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 447 EYLSTG------KSSEKTDVFGYGITLLEL 470
E L S ++ D++ +G+ L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FG V G VA+K +++ E F E ++ H+ L+QL G CT
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE--GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC------ 393
++ +M N + LR++ R F T LE + C
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREM-------------RHRFQTQQLLEMCKDVCEAMEYL 127
Query: 394 -NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV--DAKLTHVTTQ--IRGTMGHIAPEY 448
+ + +HRDL A N L++D + DFGL++ V D + V ++ +R + PE
Sbjct: 128 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS----PPEV 183
Query: 449 LSTGKSSEKTDVFGYGITLLELVT 472
L K S K+D++ +G+ + E+ +
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 38/222 (17%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHL-ISVA 326
+L D+F + + +G G G V+K + P G ++ +HL I A
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFK---------------VSHKPSGLVMARKLIHLEIKPA 49
Query: 327 IHKNL---LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------- 376
I + LQ++ C + F + ++ + + G LD +K
Sbjct: 50 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS--LDQVLKKAGRIPEQ 107
Query: 377 ---RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTH 432
+V+ GL YL E+ KI+HRD+K +NIL++ E LCDFG++ +L+D
Sbjct: 108 ILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----E 161
Query: 433 VTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+ + GT +++PE L S ++D++ G++L+E+ G+
Sbjct: 162 MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVYKGVLSD-NTKVAVKRLQD--YYSPGGEAAFQREVHL 322
+++L ++F ++G+G FGKV+ N A+K L+ E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
+S+A L + +CT ++ L + M+ L+ + ++ K D A
Sbjct: 71 LSLAWEHPFLTHM-FCTFQTKENLFF-VMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEI 127
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK---LVDAKLTHVTTQIRG 439
GL++LH + I++RDLK NILLD + + DFG+ K L DAK T G
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK----TNXFCG 180
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
T +IAPE L K + D + +G+ L E++ GQ
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 391 EQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 377 RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTT 435
+V+ GL YL E+ +I+HRD+K +NIL++ E LCDFG++ +L+D+ +
Sbjct: 118 KVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 171
Query: 436 QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAI 477
GT ++APE L S ++D++ G++L+EL G+ I
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 74 RNGNVISLTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLA 133
NG+++ L + N SG I I + +L L ND+SG++PD +G + L L+L+
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLF-ILNLGHNDISGSIPDEVGDLRGLNILDLS 685
Query: 134 NNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM--QLFSVATFNFTGTHLICGSSLEQ 190
+NK G IP S L+ L +DLS+NNL+G IP Q + F +CG L +
Sbjct: 686 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPR 744
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGS 140
L L +NGF+GKI P+++ L S L N LSGT+P LGS++ L+ L L N G
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLH-LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE 454
Query: 141 IPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVATFNF 177
IP + L+ L L N+LTG IP L + N+
Sbjct: 455 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 491
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 71 VTCRNGNVISLTLGSNGFSGKISPSITK-LKFLASFRELQDNDLSGTLPDFLGSMTHLQS 129
+T + ++++L L SN FSG I P++ + K LQ+N +G +P L + + L S
Sbjct: 360 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVS 419
Query: 130 LNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVATF 175
L+L+ N SG+IP++ LS L+ L L N L G IP +L V T
Sbjct: 420 LHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTL 465
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 80 SLTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSG 139
+L L N +G+I ++ L ++ L +N L+G +P ++G + +L L L+NN FSG
Sbjct: 467 TLILDFNDLTGEIPSGLSNCTNL-NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 525
Query: 140 SIPATWSQLSNLKHLDLSSNNLTGRIPMQLF 170
+IPA +L LDL++N G IP +F
Sbjct: 526 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGS 140
L L N G+I + +K L + L NDL+G +P L + T+L ++L+NN+ +G
Sbjct: 444 LKLWLNMLEGEIPQELMYVKTLETLI-LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 502
Query: 141 IPATWSQLSNLKHLDLSSNNLTGRIPMQL 169
IP +L NL L LS+N+ +G IP +L
Sbjct: 503 IPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGT-LPDFLGSMTH-LQSLNLANNKFS 138
L L N FSG++ S+T L +L N+ SG LP+ + + LQ L L NN F+
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 139 GSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVA 173
G IP T S S L L LS N L+G IP L S++
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 439
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 76 GNVISLTLGSNGFSGKISPS-ITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLAN 134
G + L + N SG + S L+FL ++ N+ S +P FLG + LQ L+++
Sbjct: 175 GELKHLAISGNKISGDVDVSRCVNLEFL----DVSSNNFSTGIP-FLGDCSALQHLDISG 229
Query: 135 NKFSGSIPATWSQLSNLKHLDLSSNNLTGRIP------MQLFSVATFNFTG 179
NK SG S + LK L++SSN G IP +Q S+A FTG
Sbjct: 230 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTG 280
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Query: 53 QFTDWNDHFVSPCFSWSHVTCRNGNVISLTLGSNGFSGKISP-SITKLKFLASFRELQDN 111
Q D + + +S FS + TC +++++ SN F G I P + L++L+ L +N
Sbjct: 223 QHLDISGNKLSGDFSRAISTCTELKLLNIS--SNQFVGPIPPLPLKSLQYLS----LAEN 276
Query: 112 DLSGTLPDFL-GSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM 167
+G +PDFL G+ L L+L+ N F G++P + S L+ L LSSNN +G +PM
Sbjct: 277 KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 333
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 32/137 (23%)
Query: 56 DWNDHFVSPCFSWSHVTCRNGNVISLTLGSN----GFSG-------------------KI 92
DW+ + +PC ++ VTCR+ V S+ L S GFS I
Sbjct: 29 DWSSN-KNPC-TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHI 86
Query: 93 SPSITKLKFLASFR--ELQDNDLSGTLPDF--LGSMTHLQSLNLANN--KFSGSIPATWS 146
+ S++ K AS +L N LSG + LGS + L+ LN+++N F G +
Sbjct: 87 NGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL- 145
Query: 147 QLSNLKHLDLSSNNLTG 163
+L++L+ LDLS+N+++G
Sbjct: 146 KLNSLEVLDLSANSISG 162
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 74 RNGNVISLTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLA 133
NG+++ L + N SG I I + +L L ND+SG++PD +G + L L+L+
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLF-ILNLGHNDISGSIPDEVGDLRGLNILDLS 688
Query: 134 NNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPM--QLFSVATFNFTGTHLICGSSLEQ 190
+NK G IP S L+ L +DLS+NNL+G IP Q + F +CG L +
Sbjct: 689 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPR 747
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGS 140
L L +NGF+GKI P+++ L S L N LSGT+P LGS++ L+ L L N G
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLH-LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE 457
Query: 141 IPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVATFNF 177
IP + L+ L L N+LTG IP L + N+
Sbjct: 458 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 71 VTCRNGNVISLTLGSNGFSGKISPSITK-LKFLASFRELQDNDLSGTLPDFLGSMTHLQS 129
+T + ++++L L SN FSG I P++ + K LQ+N +G +P L + + L S
Sbjct: 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVS 422
Query: 130 LNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVATF 175
L+L+ N SG+IP++ LS L+ L L N L G IP +L V T
Sbjct: 423 LHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTL 468
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 80 SLTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSG 139
+L L N +G+I ++ L ++ L +N L+G +P ++G + +L L L+NN FSG
Sbjct: 470 TLILDFNDLTGEIPSGLSNCTNL-NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 528
Query: 140 SIPATWSQLSNLKHLDLSSNNLTGRIPMQLF 170
+IPA +L LDL++N G IP +F
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGS 140
L L N G+I + +K L + L NDL+G +P L + T+L ++L+NN+ +G
Sbjct: 447 LKLWLNMLEGEIPQELMYVKTLETLI-LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 141 IPATWSQLSNLKHLDLSSNNLTGRIPMQL 169
IP +L NL L LS+N+ +G IP +L
Sbjct: 506 IPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 81 LTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGT-LPDFLGSMTH-LQSLNLANNKFS 138
L L N FSG++ S+T L +L N+ SG LP+ + + LQ L L NN F+
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 139 GSIPATWSQLSNLKHLDLSSNNLTGRIPMQLFSVA 173
G IP T S S L L LS N L+G IP L S++
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS 442
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 76 GNVISLTLGSNGFSGKISPS-ITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLAN 134
G + L + N SG + S L+FL ++ N+ S +P FLG + LQ L+++
Sbjct: 178 GELKHLAISGNKISGDVDVSRCVNLEFL----DVSSNNFSTGIP-FLGDCSALQHLDISG 232
Query: 135 NKFSGSIPATWSQLSNLKHLDLSSNNLTGRIP------MQLFSVATFNFTG 179
NK SG S + LK L++SSN G IP +Q S+A FTG
Sbjct: 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTG 283
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 8/118 (6%)
Query: 53 QFTDWNDHFVSPCFSWSHVTCRNGNVISLTLGSNGFSGKISP-SITKLKFLASFRELQDN 111
Q D + + +S FS + TC +++++ SN F G I P + L++L+ L +N
Sbjct: 226 QHLDISGNKLSGDFSRAISTCTELKLLNIS--SNQFVGPIPPLPLKSLQYLS----LAEN 279
Query: 112 DLSGTLPDFL-GSMTHLQSLNLANNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIPMQ 168
+G +PDFL G+ L L+L+ N F G++P + S L+ L LSSNN +G +PM
Sbjct: 280 KFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 337
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 32/137 (23%)
Query: 56 DWNDHFVSPCFSWSHVTCRNGNVISLTLGSN----GFSG-------------------KI 92
DW+ + +PC ++ VTCR+ V S+ L S GFS I
Sbjct: 32 DWSSN-KNPC-TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHI 89
Query: 93 SPSITKLKFLASFR--ELQDNDLSGTLPDF--LGSMTHLQSLNLANN--KFSGSIPATWS 146
+ S++ K AS +L N LSG + LGS + L+ LN+++N F G +
Sbjct: 90 NGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL- 148
Query: 147 QLSNLKHLDLSSNNLTG 163
+L++L+ LDLS+N+++G
Sbjct: 149 KLNSLEVLDLSANSISG 165
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 318
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
E + H ++++LIG T + V+ M+ ++ L+ + LD +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILY 496
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A+ + L YL + + +HRD+ A N+L+ N L DFGL++ ++ + ++ +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
+ +APE ++ + + +DV+ +G+ + E++
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 280 IGQGGFGKVYKGVLS------DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG+VY+G +S +VAVK L + S E F E +IS H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKP---GEKGLDWPTRKRVAFGTAYGLEYLH 390
IG S R ++ M + LR+ +P L VA A G +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 391 EQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAP 446
E IHRD+ A N LL A + DFG+A+ + A + + P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVT 472
E G + KTD + +G+ L E+ +
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 273 NFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ--DYYSPGGEAAFQREVHLISVAIHK 329
NF IG+G F +VY+ L D VA+K++Q D A +E+ L+ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYL 389
N+++ +E +V ++ ++ K ++ + T + LE++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 390 HEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL 449
H + +++HRD+K AN+ + L D GL + +K T + + GT +++PE +
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERI 208
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ K+D++ G L E+ Q
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQ 233
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT-QI 437
+F A G+E+L + K IHRDL A NILL +N +CDFGLA+ + +V
Sbjct: 205 SFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 438 RGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKL 497
R + +APE + S K+DV+ YG+ L E+ + +
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS---------------LGGSPYPGVQ 306
Query: 498 LRED---RLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
+ ED RL + + Y + E+ Q+ L C P++RP A++V+ L
Sbjct: 307 MDEDFCSRLREGMRMRAPEYSTPEI---YQIMLDCWHRDPKERPRFAELVEKL 356
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + A + +G+G FGKV + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 316 FQREVHLIS-VAIHKNLLQLIGYCTTSSERILV 347
E+ +++ + H N++ L+G CT ++V
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMV 109
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG+G FG V G N KVAVK +++ + AF E +++ H NL+QL+G
Sbjct: 20 IGKGEFGDVMLGDYRGN-KVAVKCIKNDATA---QAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 340 TSSERI-LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
+ +V +M S+ LR G L + + +EYL +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFV 130
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRDL A N+L+ ++ A + DFGL K +A T T ++ + APE L S K+
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREAAFSTKS 186
Query: 459 DVFGYGITLLELVTGQR 475
DV+ +GI L E+ + R
Sbjct: 187 DVWSFGILLWEIYSFGR 203
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 37/235 (15%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAF--QREV 320
+ E L DN +IG+G +G VYKG L D VAVK +S F ++ +
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVK----VFSFANRQNFINEKNI 58
Query: 321 HLISVAIHKNLLQLI-GYCTTSS----ERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTR 375
+ + + H N+ + I G ++ E +LV + N S+ L DW +
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSS 113
Query: 376 KRVAFGTAYGLEYLH------EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDA 428
R+A GL YLH + P I HRDL + N+L+ ++ V+ DFGL+ +L
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
Query: 429 KLT------HVTTQIRGTMGHIAPEYLSTG-------KSSEKTDVFGYGITLLEL 470
+L + GT+ ++APE L + ++ D++ G+ E+
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 25/221 (11%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE--AAFQREVHL 322
+E + + +IG+G FG+VY G + +VA+ RL D + AF+REV
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRW--HGEVAI-RLIDIERDNEDQLKAFKREVMA 82
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
H+N++ +G C + ++ + ++ +RD K LD +++A
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEI 139
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGL---AKLVDAKLTHVTTQIR- 438
G+ YLH + I+H+DLK+ N+ DN + V+ DFGL + ++ A +I+
Sbjct: 140 VKGMGYLHAKG---ILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQN 195
Query: 439 GTMGHIAPEY---LSTGKSSEK------TDVFGYGITLLEL 470
G + H+APE LS +K +DVF G EL
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 280 IGQGGFGKVYKGVLS----DNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T +++ + + L L+ + T R A A G+ YL +
Sbjct: 76 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 130
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ--IRGTMGHIAPEYLST 451
+ IHRDL A N+LL + DFGL + + H Q + APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 452 GKSSEKTDVFGYGITLLELVT 472
S +D + +G+TL E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 274 FSESNIIGQGGFGKVYKGVLSD-NTKVAVKRLQDYYSPGGEAAFQR----EVHLISVAIH 328
+ + + +G+G F VYK + N VA+K+++ + + R E+ L+ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 329 KNLLQLIGYCTTSSERILVYPFMQ-NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
N++ L+ S LV+ FM+ +L V + L + K T GLE
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHI-----KAYMLMTLQGLE 126
Query: 388 YLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE 447
YLH+ I+HRDLK N+LLD+N L DFGLAK + Q+ T + APE
Sbjct: 127 YLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPE 182
Query: 448 YLSTGKS-SEKTDVFGYGITLLELV 471
L + D++ G L EL+
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRL--QDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 336
+G+G FGKV KVA+K + Q +RE+ + + H ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 337 YCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPK 396
TT ++ ++V + L D +K + +R +EY H K
Sbjct: 77 VITTPTDIVMVIEY-----AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---K 128
Query: 397 IIHRDLKAANILLDDNFEAVLCDFGLAKLV-DAKLTHVTTQIRGTMGHIAPEYLSTGK-- 453
I+HRDLK N+LLDDN + DFGL+ ++ D + G+ + APE ++ GK
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVIN-GKLY 184
Query: 454 SSEKTDVFGYGITLLELVTGQRAID 478
+ + DV+ GI L ++ G+ D
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 280 IGQGGFGKVYKGVLS----DNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T +++ + + L L+ + T R A A G+ YL +
Sbjct: 76 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 130
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ--IRGTMGHIAPEYLST 451
+ IHRDL A N+LL + DFGL + + H Q + APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 452 GKSSEKTDVFGYGITLLELVT 472
S +D + +G+TL E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 280 IGQGGFGKVYKGVL----SDNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T +++ + + L L+ + T R A A G+ YL +
Sbjct: 86 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 140
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ--IRGTMGHIAPEYLST 451
+ IHRDL A N+LL + DFGL + + H Q + APE L T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 452 GKSSEKTDVFGYGITLLELVT 472
S +D + +G+TL E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 280 IGQGGFGKVYKGVL----SDNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T +++ + + L L+ + T R A A G+ YL +
Sbjct: 80 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 134
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ--IRGTMGHIAPEYLST 451
+ IHRDL A N+LL + DFGL + + H Q + APE L T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 452 GKSSEKTDVFGYGITLLELVT 472
S +D + +G+TL E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 280 IGQGGFGKVYKGVL----SDNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T +++ + + L L+ + T R A A G+ YL +
Sbjct: 86 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 140
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ--IRGTMGHIAPEYLST 451
+ IHRDL A N+LL + DFGL + + H Q + APE L T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 452 GKSSEKTDVFGYGITLLELVT 472
S +D + +G+TL E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 280 IGQGGFGKVYKGVL----SDNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T +++ + + L L+ + T R A A G+ YL +
Sbjct: 80 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 134
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ--IRGTMGHIAPEYLST 451
+ IHRDL A N+LL + DFGL + + H Q + APE L T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 452 GKSSEKTDVFGYGITLLELVT 472
S +D + +G+TL E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 280 IGQGGFGKVYKGVL----SDNTKVAVKRLQ-DYYS-PGGEAAFQREVHLISVAIHKNLLQ 333
+G G FG V +G VAVK L+ D S P F REV+ + H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
L G T +++ + + L L+ + T R A A G+ YL +
Sbjct: 76 LYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK- 130
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ--IRGTMGHIAPEYLST 451
+ IHRDL A N+LL + DFGL + + H Q + APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 452 GKSSEKTDVFGYGITLLELVT 472
S +D + +G+TL E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 318
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
E + H ++++LIG T + V+ M+ ++ L+ + LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILY 116
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A+ + L YL + + +HRD+ A N+L+ L DFGL++ ++ + ++ +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
+ +APE ++ + + +DV+ +G+ + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQ---REVHLISVAIHKN 330
FS+ IG G FG VY N++V + Y +Q +EV + H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
+Q G LV + L A L L+ +K L V G GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC--LGSASDL--LEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY-- 448
+IHRD+KA NILL + L DFG A ++ V GT +APE
Sbjct: 133 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 184
Query: 449 -LSTGKSSEKTDVFGYGITLLEL 470
+ G+ K DV+ GIT +EL
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQ---REVHLISVAIHKN 330
FS+ IG G FG VY N++V + Y +Q +EV + H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
+Q G LV + L A L L+ +K L V G GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC--LGSASDL--LEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY-- 448
+IHRD+KA NILL + L DFG A ++ V GT +APE
Sbjct: 172 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 223
Query: 449 -LSTGKSSEKTDVFGYGITLLELV 471
+ G+ K DV+ GIT +EL
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELA 247
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FGKVYK + +A ++ + S + E+ +++ H +++L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIH 399
+ ++ F +V + +L ++GL P + V L +LH + +IIH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 400 RDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL--STGKSSE- 456
RDLKA N+L+ + L DFG++ + K GT +APE + T K +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 457 --KTDVFGYGITLLEL 470
K D++ GITL+E+
Sbjct: 192 DYKADIWSLGITLIEM 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 280 IGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLI 335
IG+G FG V++G+ + VA+K ++ S F +E + H ++++LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
G T + V+ M+ ++ L+ + LD + A+ + L YL +
Sbjct: 75 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 127
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
+ +HRD+ A N+L+ N L DFGL++ ++ + ++ + + +APE ++ + +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 456 EKTDVFGYGITLLELV 471
+DV+ +G+ + E++
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAI 327
D + +++G G F +V +L+++ + VA+K + G E + + E+ ++
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTR--KRVAFGTAYG 385
H N++ L + L+ + + R+ EKG + R R+ F
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-----EKGF-YTERDASRLIFQVLDA 128
Query: 386 LEYLHEQCNPKIIHRDLKAANIL---LDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
++YLH+ I+HRDLK N+L LD++ + ++ DFGL+K+ D V + GT G
Sbjct: 129 VKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPG 183
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++APE L+ S+ D + G+ L+ G
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FGKVYK + +A ++ + S + E+ +++ H +++L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIH 399
+ ++ F +V + +L ++GL P + V L +LH + +IIH
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 400 RDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL--STGKSSE- 456
RDLKA N+L+ + L DFG++ + K GT +APE + T K +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 199
Query: 457 --KTDVFGYGITLLEL 470
K D++ GITL+E+
Sbjct: 200 DYKADIWSLGITLIEM 215
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAI 327
D + +++G G F +V +L+++ + VA+K + G E + + E+ ++
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 74
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTR--KRVAFGTAYG 385
H N++ L + L+ + + R+ EKG + R R+ F
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-----EKGF-YTERDASRLIFQVLDA 128
Query: 386 LEYLHEQCNPKIIHRDLKAANIL---LDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
++YLH+ I+HRDLK N+L LD++ + ++ DFGL+K+ D V + GT G
Sbjct: 129 VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPG 183
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++APE L+ S+ D + G+ L+ G
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAI 327
D + +++G G F +V +L+++ + VA+K + G E + + E+ ++
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTR--KRVAFGTAYG 385
H N++ L + L+ + + R+ EKG + R R+ F
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-----EKGF-YTERDASRLIFQVLDA 128
Query: 386 LEYLHEQCNPKIIHRDLKAANIL---LDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
++YLH+ I+HRDLK N+L LD++ + ++ DFGL+K+ D V + GT G
Sbjct: 129 VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPG 183
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++APE L+ S+ D + G+ L+ G
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRLQDYYSPGGEAAFQREVHLISVAI 327
D + +++G G F +V +L+++ + VA+K + G E + + E+ ++
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTR--KRVAFGTAYG 385
H N++ L + L+ + + R+ EKG + R R+ F
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-----EKGF-YTERDASRLIFQVLDA 128
Query: 386 LEYLHEQCNPKIIHRDLKAANIL---LDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
++YLH+ I+HRDLK N+L LD++ + ++ DFGL+K+ D V + GT G
Sbjct: 129 VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPG 183
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++APE L+ S+ D + G+ L+ G
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 30/235 (12%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQR 318
+ + +N +G G FGKV + G+ ++ KVAVK L+ + A
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 319 EVHLIS-VAIHKNLLQLIGYCTTSSERILVYP---------FMQNLSVAYRLRDLKPGE- 367
E+ ++S + H+N++ L+G CT +++ F++ + A L PG+
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 368 -KGLD------WPTRKRVAFGT--AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLC 418
+GLD R + F + A G+ +L + IHRD+ A N+LL + A +
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIG 200
Query: 419 DFGLAK-LVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
DFGLA+ +++ V R + +APE + + ++DV+ YGI L E+ +
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 25/220 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
+ D+F +G+G FG VY N + A+K L G E +RE+ + S
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT-- 382
H N+L++ Y L+ L A R K +K + ++ F
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLM------LEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR---- 438
A L Y HE+ K+IHRD+K N+L+ E + DFG + H + R
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMC 173
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
GT+ ++ PE + EK D++ G+ E + G D
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 42/219 (19%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNL------- 331
+G GGFG V + + D +VA+K+ + SP + E+ ++ H N+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 332 ------------LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVA 379
L + YC R + F LK G P R ++
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG-------LKEG------PIRTLLS 129
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL---CDFGLAKLVDAKLTHVTTQ 436
+ L YLHE +IIHRDLK NI+L + ++ D G AK +D + T+
Sbjct: 130 -DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ--GELCTE 183
Query: 437 IRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQR 475
GT+ ++APE L K + D + +G E +TG R
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 42/219 (19%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNL------- 331
+G GGFG V + + D +VA+K+ + SP + E+ ++ H N+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 332 ------------LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVA 379
L + YC R + F LK G P R ++
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG-------LKEG------PIRTLLS 128
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL---CDFGLAKLVDAKLTHVTTQ 436
+ L YLHE +IIHRDLK NI+L + ++ D G AK +D + T+
Sbjct: 129 -DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ--GELCTE 182
Query: 437 IRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQR 475
GT+ ++APE L K + D + +G E +TG R
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 25/220 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
+ D+F +G+G FG VY N + A+K L G E +RE+ + S
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT-- 382
H N+L++ Y L+ L A R K +K + ++ F
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLM------LEFAPRGELYKELQKHGRFDEQRSATFMEEL 124
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR---- 438
A L Y HE+ K+IHRD+K N+L+ E + DFG + H + R
Sbjct: 125 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMC 174
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
GT+ ++ PE + EK D++ G+ E + G D
Sbjct: 175 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 129/303 (42%), Gaps = 35/303 (11%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNTK--VAVKRLQDYYSPGGEAA 315
+ + + D + +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV---YPFMQNLSVAYRLR--DLKPGEKG 369
E+ LI + H N++ L+G CT ++V + NLS R + + P +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 370 L-DWPTRKRV---AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKL 425
D+ T + + +F A G+E+L + K IHRDL A NILL + + DFGLA+
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARD 193
Query: 426 VDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXX 484
+ +V R + +APE + + ++DV+ +G+ L E+ +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPY 247
Query: 485 XXXXXXXXHIRKLLREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVV 544
R+L R+ Y + E M Q L C P RP +++V
Sbjct: 248 PGVKIDEEFXRRLKEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTFSELV 298
Query: 545 KML 547
+ L
Sbjct: 299 EHL 301
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 25/220 (11%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLIS 324
+ D+F +G+G FG VY N + A+K L G E +RE+ + S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--GT 382
H N+L++ Y L+ L A R K +K + ++ F
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLM------LEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR---- 438
A L Y HE+ K+IHRD+K N+L+ E + DFG + H + R
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMC 173
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
GT+ ++ PE + EK D++ G+ E + G D
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
IGQG FG+V+K KVA+K+ L + G RE+ ++ + H+N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 338 CTTSSERI--------LVYPF--------MQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
C T + LV+ F + N+ V + L ++K RV
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------RVMQM 133
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG-- 439
GL Y+H KI+HRD+KAAN+L+ + L DFGLA+ +
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 440 -TMGHIAPEYLSTGKS-SEKTDVFGYGITLLELVT 472
T+ + PE L + D++G G + E+ T
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y ++DL + T+ Y
Sbjct: 85 IIGI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH- 73
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 74 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTK-VAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
IG+G +G V+K + + VA+KR++ D G ++ RE+ L+ HKN+++L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 338 CTTSSERILVYPFM-QNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPK 396
+ + LV+ F Q+L + D G+ LD K F GL + H +
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYF---DSCNGD--LDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 397 IIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK-SS 455
++HRDLK N+L++ N E L DFGLA+ + + ++ T+ + P+ L K S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV-VTLWYRPPDVLFGAKLYS 180
Query: 456 EKTDVFGYGITLLELVTGQRAI 477
D++ G EL R +
Sbjct: 181 TSIDMWSAGCIFAELANAARPL 202
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 27/208 (12%)
Query: 280 IGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAAFQREVHLISVAIHKN----LLQL 334
+G G G+V+K V AVK+++ G + +R + + V + + ++Q
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMR---RSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTR--KRVAFGTAYGLEYLHEQ 392
G T+++ + M + + R P P R ++ L YL E+
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGP------IPERILGKMTVAIVKALYYLKEK 143
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLST 451
+IHRD+K +NILLD+ + LCDFG++ +LVD K + G ++APE +
Sbjct: 144 HG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDP 198
Query: 452 GKSSE-----KTDVFGYGITLLELVTGQ 474
++ + DV+ GI+L+EL TGQ
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
IG+G FG+V++G +VAVK +S E ++ RE + + H+N+L I
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 338 CT----TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH--- 390
T ++ LV + ++ S+ L +G+ ++A TA GL +LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 121
Query: 391 --EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR---GTMGHIA 445
Q P I HRDLK+ NIL+ N + D GLA D+ + GT ++A
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 446 PEYLSTG------KSSEKTDVFGYGITLLEL 470
PE L +S ++ D++ G+ E+
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
IGQG FG+V+K KVA+K+ L + G RE+ ++ + H+N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 338 CTTSSERI--------LVYPF--------MQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
C T + LV+ F + N+ V + L ++K RV
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------RVMQM 133
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG-- 439
GL Y+H KI+HRD+KAAN+L+ + L DFGLA+ +
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 440 -TMGHIAPEYLSTGKS-SEKTDVFGYGITLLELVT 472
T+ + PE L + D++G G + E+ T
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVYKGVL----SDNTKVAVKRLQDYYSPGGEAAFQR 318
S R+ ++ + IG+G FG V++G+ + VA+K ++ S F +
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 319 EVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
E + H ++++LIG T + V+ M+ ++ L+ + LD +
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILY 496
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A+ + L YL + + +HRD+ A N+L+ L DFGL++ ++ + ++ +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
+ +APE ++ + + +DV+ +G+ + E++
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
IGQG FG+V+K KVA+K+ L + G RE+ ++ + H+N++ LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 338 CTTSSERI--------LVYPF--------MQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
C T + LV+ F + N+ V + L ++K RV
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------RVMQM 132
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG-- 439
GL Y+H KI+HRD+KAAN+L+ + L DFGLA+ +
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 440 -TMGHIAPEYLSTGKS-SEKTDVFGYGITLLELVT 472
T+ + PE L + D++G G + E+ T
Sbjct: 190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
+G+G +G+V++G L VAVK +S E ++ RE + + + H N+L I
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK----IFSSRDEQSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 338 CTTS----SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH--- 390
TS ++ L+ + ++ S+ L+ + L+ R+A A GL +LH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLHVEI 125
Query: 391 --EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVD--AKLTHVTTQIR-GTMGHIA 445
Q P I HRD K+ N+L+ N + + D GLA + + + R GT ++A
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 446 PEYLSTG------KSSEKTDVFGYGITLLEL 470
PE L +S + TD++ +G+ L E+
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
IG+G FG+V++G +VAVK +S E ++ RE + + H+N+L I
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 338 CT----TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH--- 390
T ++ LV + ++ S+ L +G+ ++A TA GL +LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 120
Query: 391 --EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR---GTMGHIA 445
Q P I HRDLK+ NIL+ N + D GLA D+ + GT ++A
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 446 PEYLSTG------KSSEKTDVFGYGITLLEL 470
PE L +S ++ D++ G+ E+
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y ++DL + T+ Y
Sbjct: 85 IIGI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + ++ H+N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH- 73
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 74 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
IGQG FG+V+K KVA+K+ L + G RE+ ++ + H+N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 338 CTTSSERI--------LVYPF--------MQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
C T + LV+ F + N+ V + L ++K RV
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------------RVMQM 133
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG-- 439
GL Y+H KI+HRD+KAAN+L+ + L DFGLA+ +
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 440 -TMGHIAPEYLSTGKS-SEKTDVFGYGITLLELVT 472
T+ + PE L + D++G G + E+ T
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 11/259 (4%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYS--PGGEAAFQREVHLISVAIHKNLLQLIGY 337
IG G +G+ K + K+ V + DY S + EV+L+ H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 338 CT--TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
T++ +V + + +A + + LD RV L+ H + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 396 --KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++HRDLK AN+ LD L DFGLA++++ + T + GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMS 192
Query: 454 SSEKTDVFGYGITLLELVTGQRAID-FSRXXXXXXXXXXXHIRKLLR-EDRLNDIVDR-- 509
+EK+D++ G L EL FS+ R R D LN+I+ R
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 510 NLNTYDSKEVETMVQVALL 528
NL Y VE +++ L+
Sbjct: 253 NLKDYHRPSVEEILENPLI 271
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
IG+G FG+V++G +VAVK +S E ++ RE + + H+N+L I
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 338 CT----TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH--- 390
T ++ LV + ++ S+ L +G+ ++A TA GL +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 159
Query: 391 --EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR---GTMGHIA 445
Q P I HRDLK+ NIL+ N + D GLA D+ + GT ++A
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 446 PEYLSTG------KSSEKTDVFGYGITLLEL 470
PE L +S ++ D++ G+ E+
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 89 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T +
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
IG+G FG+V++G +VAVK +S E ++ RE + + H+N+L I
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 338 CT----TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH--- 390
T ++ LV + ++ S+ L +G+ ++A TA GL +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 126
Query: 391 --EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR---GTMGHIA 445
Q P I HRDLK+ NIL+ N + D GLA D+ + GT ++A
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 446 PEYLSTG------KSSEKTDVFGYGITLLEL 470
PE L +S ++ D++ G+ E+
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y ++DL + T+ Y
Sbjct: 83 IIGI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQREVH 321
+ +N +G G FGKV + G+ ++ KVAVK L+ + A E+
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 322 LIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR-----DLKPGEKGLDWPTR 375
++S + H+N++ L+G CT +++ + + LR DL E G R
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK-EDGRPLELR 152
Query: 376 KRVAFGT--AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTH 432
+ F + A G+ +L + IHRD+ A N+LL + A + DFGLA+ +++
Sbjct: 153 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 209
Query: 433 VTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
V R + +APE + + ++DV+ YGI L E+ +
Sbjct: 210 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
IG+G FG+V++G +VAVK +S E ++ RE + + H+N+L I
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 338 CT----TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH--- 390
T ++ LV + ++ S+ L +G+ ++A TA GL +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 146
Query: 391 --EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR---GTMGHIA 445
Q P I HRDLK+ NIL+ N + D GLA D+ + GT ++A
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 446 PEYLSTG------KSSEKTDVFGYGITLLEL 470
PE L +S ++ D++ G+ E+
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQ-------REVH 321
+AT + IG G +G VYK D L+ P G REV
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 322 LI---SVAIHKNLLQLIGYCTTS--SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK 376
L+ H N+++L+ C TS I V +++ R K GL T K
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 123
Query: 377 RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ 436
+ GL++LH C I+HRDLK NIL+ L DFGLA++ ++ T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTP 178
Query: 437 IRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLEL 470
+ T+ + APE L + D++ G E+
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
IG+G FG+V++G +VAVK +S E ++ RE + + H+N+L I
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK----IFSSREERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 338 CT----TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH--- 390
T ++ LV + ++ S+ L +G+ ++A TA GL +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 123
Query: 391 --EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR---GTMGHIA 445
Q P I HRDLK+ NIL+ N + D GLA D+ + GT ++A
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 446 PEYLSTG------KSSEKTDVFGYGITLLEL 470
PE L +S ++ D++ G+ E+
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 27/230 (11%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQR 318
+ + +N +G G FGKV + G+ ++ KVAVK L+ + A
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 319 EVHLIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWP---- 373
E+ ++S + H+N++ L+G CT +++ + + LR +P GL++
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRP--PGLEYSYNPS 156
Query: 374 --------TRKRVAFGT--AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA 423
+R + F + A G+ +L + IHRD+ A N+LL + A + DFGLA
Sbjct: 157 HNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLA 213
Query: 424 K-LVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ +++ V R + +APE + + ++DV+ YGI L E+ +
Sbjct: 214 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y ++DL + T+ Y
Sbjct: 83 IIGI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 27/262 (10%)
Query: 233 QKLRKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKV---- 288
+ + +++ V ++ G + + TQL + + + S +G G FGKV
Sbjct: 2 KPMYEVQWKVVEEINGNNXVXIDPTQLPY--DHKWEFPRNRLSFGKTLGAGAFGKVVEAT 59
Query: 289 -YKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLIS-VAIHKNLLQLIGYCTTSSERI 345
Y + SD VAVK L+ A E+ ++S + H N++ L+G CT +
Sbjct: 60 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 119
Query: 346 LVYPFM---QNLSVAYRLRD-----------LKPGEKGLDWPTRKRVAFGTAYGLEYLHE 391
++ + L+ R RD ++ E LD ++ A G+ +L
Sbjct: 120 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 179
Query: 392 QCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT-QIRGTMGHIAPEYLS 450
+ IHRDL A NILL +CDFGLA+ + +V R + +APE +
Sbjct: 180 K---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 236
Query: 451 TGKSSEKTDVFGYGITLLELVT 472
+ ++DV+ YGI L EL +
Sbjct: 237 NCVYTFESDVWSYGIFLWELFS 258
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y ++DL + T+ Y
Sbjct: 91 IIGI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 142
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T
Sbjct: 143 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y ++DL + T+ Y
Sbjct: 83 IIGI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y ++DL + T+ Y
Sbjct: 85 IIGI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 74 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVD-AKLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y ++DL + T+ Y
Sbjct: 83 IIGI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 45/237 (18%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQDYYSPGGEAAFQREVHLISV 325
L+ A+D F E ++GQG FG+V K + D+ A+K+++ ++ + EV L++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR--HTEEKLSTILSEVMLLAS 58
Query: 326 AIHKNLLQLIGYCTTSSERILVYP----------FMQNLSVAYR-LRDLKPGE-----KG 369
H+ +++ Y R V P F+Q R L DL E +
Sbjct: 59 LNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD 116
Query: 370 LDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAK 429
W R+ L Y+H Q IIHRDLK NI +D++ + DFGLAK V
Sbjct: 117 EYW----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 430 L--------------THVTTQIRGTMGHIAPEYLS-TGKSSEKTDVFGYGITLLELV 471
L ++T+ I GT ++A E L TG +EK D++ GI E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 29/218 (13%)
Query: 271 TDNFSESNIIGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHK 329
+ +F +++G+G +G V + VA+K+++ + P RE+ ++ H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTR-------KRVAFGT 382
N++ + S +N + Y +++L + T+ + + T
Sbjct: 70 NIITIFNIQRPDS--------FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVD---AKLTHVTTQIRG 439
++ LH +IHRDLK +N+L++ N + +CDFGLA+++D A + T Q G
Sbjct: 122 LRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 440 TMGHI------APE-YLSTGKSSEKTDVFGYGITLLEL 470
++ APE L++ K S DV+ G L EL
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 278 NIIGQGGFGKVYKGVLS-DNTKVAVKRL--QDYYSPGGEAAFQREVHLISVAIHKNLLQL 334
+ +G G FGKV G KVAVK L Q S +RE+ + + H ++++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCN 394
+T S+ +V ++ L D LD +R+ G++Y H
Sbjct: 82 YQVISTPSDIFMVMEYVS----GGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM- 136
Query: 395 PKIIHRDLKAANILLDDNFEAVLCDFGLAKLV-DAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++HRDLK N+LLD + A + DFGL+ ++ D + + G+ + APE +S G+
Sbjct: 137 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEVIS-GR 190
Query: 454 --SSEKTDVFGYGITLLELVTGQRAID 478
+ + D++ G+ L L+ G D
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 31/267 (11%)
Query: 232 YQKLRKLKHDVFFDVA----GEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGK 287
Y+ L+K ++V + V G + + TQL + + + S +G G FGK
Sbjct: 4 YKYLQKPMYEVQWKVVEEINGNNYVYIDPTQLPY--DHKWEFPRNRLSFGKTLGAGAFGK 61
Query: 288 V-----YKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLIS-VAIHKNLLQLIGYCTT 340
V Y + SD VAVK L+ A E+ ++S + H N++ L+G CT
Sbjct: 62 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 121
Query: 341 SSERILVYPFM---QNLSVAYRLRD-----------LKPGEKGLDWPTRKRVAFGTAYGL 386
+++ + L+ R RD ++ E LD ++ A G+
Sbjct: 122 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 181
Query: 387 EYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT-QIRGTMGHIA 445
+L + IHRDL A NILL +CDFGLA+ + +V R + +A
Sbjct: 182 AFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMA 238
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVT 472
PE + + ++DV+ YGI L EL +
Sbjct: 239 PESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 71
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 72 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 125
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 186 PVDVWSCGIVLTAMLAGELPWD 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 74 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVD-AKLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 268 QLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQREVH 321
+ +N +G G FGKV + G+ ++ KVAVK L+ + A E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 322 LIS-VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR-----DLKPGEKGLDWPTR 375
++S + H+N++ L+G CT +++ + + LR DL E G R
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK-EDGRPLELR 160
Query: 376 KRVAFGT--AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTH 432
+ F + A G+ +L + IHRD+ A N+LL + A + DFGLA+ +++
Sbjct: 161 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 217
Query: 433 VTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
V R + +APE + + ++DV+ YGI L E+ +
Sbjct: 218 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 37/233 (15%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQDYYSPGGEAAFQREVHLISV 325
L+ A+D F E ++GQG FG+V K + D+ A+K+++ ++ + EV L++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR--HTEEKLSTILSEVMLLAS 58
Query: 326 AIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWP-------TRKRV 378
H+ +++ Y R V P + ++ E G + ++R
Sbjct: 59 LNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 379 AFGTAY-----GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKL--- 430
+ + L Y+H Q IIHRDLK NI +D++ + DFGLAK V L
Sbjct: 117 EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 431 -----------THVTTQIRGTMGHIAPEYLS-TGKSSEKTDVFGYGITLLELV 471
++T+ I GT ++A E L TG +EK D++ GI E++
Sbjct: 174 KLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHK 329
+ + + IG+G +G V+K D + VA+K+ L+ P + RE+ ++ H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYL 389
NL+ L+ LV+ + + L +L ++G+ K + + T + +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTV----LHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 390 HEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL 449
H+ IHRD+K NIL+ + LCDFG A+L+ + ++ T + +PE L
Sbjct: 119 HKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELL 174
Query: 450 -STGKSSEKTDVFGYGITLLELVTG 473
+ DV+ G EL++G
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y ++DL + T+ Y
Sbjct: 103 IIGI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 154
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 74 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 20/223 (8%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVY--KGVLSDNTKVAVKRL-QDYYSPGGEAAFQRE 319
SC + Q N+ IG+G F KV + +L+ +VA+K + + +P RE
Sbjct: 6 SCADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFRE 64
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRKRV 378
V ++ + H N+++L T L+ + V Y + + EK R+ V
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV 124
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDAKLTHVTTQ 436
+ ++Y H++ +I+HRDLKA N+LLD + + DFG + V KL
Sbjct: 125 S-----AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC-- 174
Query: 437 IRGTMGHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAID 478
G + APE K + DV+ G+ L LV+G D
Sbjct: 175 --GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 74 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 74 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 74 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWD 209
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 29/218 (13%)
Query: 271 TDNFSESNIIGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHK 329
+ +F +++G+G +G V + VA+K+++ + P RE+ ++ H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTR-------KRVAFGT 382
N++ + S +N + Y +++L + T+ + + T
Sbjct: 70 NIITIFNIQRPDS--------FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVD---AKLTHVTTQIRG 439
++ LH +IHRDLK +N+L++ N + +CDFGLA+++D A + T Q G
Sbjct: 122 LRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 440 ------TMGHIAPE-YLSTGKSSEKTDVFGYGITLLEL 470
T + APE L++ K S DV+ G L EL
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 280 IGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G +G VYK + + + VA+K++ E+ Q + IS+ + ++ Y
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVP------VESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 339 TTSSERILVYPFMQ-----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
+ + ++ M+ ++S RLR+ K L + T GLEYLH
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRN-----KTLTEDEIATILQSTLKGLEYLHFM- 144
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
+ IHRD+KA NILL+ A L DFG+A + + I GT +APE +
Sbjct: 145 --RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQEIG 201
Query: 454 SSEKTDVFGYGITLLELVTGQ 474
+ D++ GIT +E+ G+
Sbjct: 202 YNCVADIWSLGITAIEMAEGK 222
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 29/218 (13%)
Query: 271 TDNFSESNIIGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHK 329
+ +F +++G+G +G V + VA+K+++ + P RE+ ++ H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTR-------KRVAFGT 382
N++ + S +N + Y +++L + T+ + + T
Sbjct: 70 NIITIFNIQRPDS--------FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVD---AKLTHVTTQIRG 439
++ LH +IHRDLK +N+L++ N + +CDFGLA+++D A + T Q G
Sbjct: 122 LRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 440 ------TMGHIAPE-YLSTGKSSEKTDVFGYGITLLEL 470
T + APE L++ K S DV+ G L EL
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 31/267 (11%)
Query: 232 YQKLRKLKHDVFFDVA----GEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGK 287
Y+ L+K ++V + V G + + TQL + + + S +G G FGK
Sbjct: 4 YKYLQKPMYEVQWKVVEEINGNNYVYIDPTQLPY--DHKWEFPRNRLSFGKTLGAGAFGK 61
Query: 288 V-----YKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLIS-VAIHKNLLQLIGYCTT 340
V Y + SD VAVK L+ A E+ ++S + H N++ L+G CT
Sbjct: 62 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 121
Query: 341 SSERILVYPFM---QNLSVAYRLRD-----------LKPGEKGLDWPTRKRVAFGTAYGL 386
+++ + L+ R RD ++ E LD ++ A G+
Sbjct: 122 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 181
Query: 387 EYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT-QIRGTMGHIA 445
+L + IHRDL A NILL +CDFGLA+ + +V R + +A
Sbjct: 182 AFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 238
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVT 472
PE + + ++DV+ YGI L EL +
Sbjct: 239 PESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 89 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T +
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 83 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T +
Sbjct: 135 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 90 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T +
Sbjct: 142 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 198
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 91 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 142
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T +
Sbjct: 143 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 199
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 82 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 133
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T +
Sbjct: 134 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 190
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 89 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T +
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 83 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T +
Sbjct: 135 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 111/272 (40%), Gaps = 30/272 (11%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRL--QDYYSPGGEAAFQREVHLISVAIH 328
D+F IG+G FGKV +D K+ A+K + Q +E+ ++ H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
L+ L + +V + + Y L+ T K L+Y
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDY 130
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
L Q +IIHRD+K NILLD++ + DF +A ++ + T +TT + GT ++APE
Sbjct: 131 LQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT-MAGTKPYMAPEM 185
Query: 449 LSTGKS---SEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKLLREDRLND 505
S+ K S D + G+T EL+ G+R HIR +
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY---------------HIRSSTSSKEIVH 230
Query: 506 IVDRNLNTYDSKEVETMVQVALLCTQSTPEDR 537
+ + TY S + MV + + P+ R
Sbjct: 231 TFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQR 318
+ + +N +G G FGKV + G+ ++ KVAVK L+ + A
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 319 EVHLIS-VAIHKNLLQLIGYCTTSSERILVYPF------MQNLSVAYRLRDLKPGEKGLD 371
E+ ++S + H+N++ L+G CT +++ + + L R+ + P +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 372 --WPTRKRVAFGT--AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LV 426
TR + F + A G+ +L + IHRD+ A N+LL + A + DFGLA+ ++
Sbjct: 159 STLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 427 DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ V R + +APE + + ++DV+ YGI L E+ +
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYG 385
+ I+ P ++ + Y ++DL + + L + G
Sbjct: 89 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRG 140
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T +
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 271 TDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYS--PGGEAAFQREVHLISVAI 327
+D + I+G GG +V+ L D+ VAVK L+ + P F+RE +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 328 HKNLLQLIGYCTTSSERI---LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H ++ + Y T +E L Y M+ + LRD+ E + V
Sbjct: 71 HPAIVAV--YDTGEAETPAGPLPYIVMEYVD-GVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMG 442
L + H+ IIHRD+K ANIL+ + DFG+A+ + V T + GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+++PE ++DV+ G L E++TG+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 11/259 (4%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYS--PGGEAAFQREVHLISVAIHKNLLQLIGY 337
IG G +G+ K + K+ V + DY S + EV+L+ H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 338 CT--TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
T++ +V + + +A + + LD RV L+ H + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 396 --KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++HRDLK AN+ LD L DFGLA++++ T GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPEQMNRMS 192
Query: 454 SSEKTDVFGYGITLLELVTGQRAID-FSRXXXXXXXXXXXHIRKLLR-EDRLNDIVDR-- 509
+EK+D++ G L EL FS+ R R D LN+I+ R
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 510 NLNTYDSKEVETMVQVALL 528
NL Y VE +++ L+
Sbjct: 253 NLKDYHRPSVEEILENPLI 271
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 27/262 (10%)
Query: 233 QKLRKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKV---- 288
+ + +++ V ++ G + + TQL + + + S +G G FGKV
Sbjct: 4 KPMYEVQWKVVEEINGNNYVYIDPTQLPY--DHKWEFPRNRLSFGKTLGAGAFGKVVEAT 61
Query: 289 -YKGVLSDNT-KVAVKRLQDYYSPGGEAAFQREVHLIS-VAIHKNLLQLIGYCTTSSERI 345
Y + SD VAVK L+ A E+ ++S + H N++ L+G CT +
Sbjct: 62 AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL 121
Query: 346 LVYPFM---QNLSVAYRLRD-----------LKPGEKGLDWPTRKRVAFGTAYGLEYLHE 391
++ + L+ R RD ++ E LD ++ A G+ +L
Sbjct: 122 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 181
Query: 392 QCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT-QIRGTMGHIAPEYLS 450
+ IHRDL A NILL +CDFGLA+ + +V R + +APE +
Sbjct: 182 K---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 238
Query: 451 TGKSSEKTDVFGYGITLLELVT 472
+ ++DV+ YGI L EL +
Sbjct: 239 NCVYTFESDVWSYGIFLWELFS 260
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 16/183 (8%)
Query: 298 KVAVKRLQDYYSPGGEAAFQREVHLI-SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSV 356
+V +RL A +RE H++ VA H +++ LI +SS LV+ M+
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRK--- 184
Query: 357 AYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV 416
L D + L + + + +LH I+HRDLK NILLDDN +
Sbjct: 185 -GELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIR 240
Query: 417 LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS------EKTDVFGYGITLLEL 470
L DFG + ++ ++ GT G++APE L ++ D++ G+ L L
Sbjct: 241 LSDFGFSCHLEP--GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
Query: 471 VTG 473
+ G
Sbjct: 299 LAG 301
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAAFQR 318
+ + +N +G G FGKV + G+ ++ KVAVK L+ + A
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 319 EVHLIS-VAIHKNLLQLIGYCTTSSERILVYPF------MQNLSVAYRLRDLKPGEKGLD 371
E+ ++S + H+N++ L+G CT +++ + + L R+ + P +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 372 --WPTRKRVAFGT--AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LV 426
TR + F + A G+ +L + IHRD+ A N+LL + A + DFGLA+ ++
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 427 DAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ V R + +APE + + ++DV+ YGI L E+ +
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 273 NFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYY--SPGGEAAFQREVHLISVAIHK 329
N+ +G+G FGKV + KVA+K + + +RE+ + + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYL 389
++++L + E I+V + N Y ++ K E+ +R +EY
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIISAVEYC 119
Query: 390 HEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV-DAKLTHVTTQIRGTMGHIAPEY 448
H KI+HRDLK N+LLD++ + DFGL+ ++ D + G+ + APE
Sbjct: 120 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEV 173
Query: 449 LSTGK--SSEKTDVFGYGITLLELVTGQRAID 478
+S GK + + DV+ G+ L ++ + D
Sbjct: 174 IS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 273 NFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYY--SPGGEAAFQREVHLISVAIHK 329
N+ +G+G FGKV + KVA+K + + +RE+ + + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYL 389
++++L + E I+V + N Y ++ K E+ +R +EY
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIISAVEYC 123
Query: 390 HEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV-DAKLTHVTTQIRGTMGHIAPEY 448
H KI+HRDLK N+LLD++ + DFGL+ ++ D + G+ + APE
Sbjct: 124 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEV 177
Query: 449 LSTGK--SSEKTDVFGYGITLLELVTGQRAID 478
+S GK + + DV+ G+ L ++ + D
Sbjct: 178 IS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 273 NFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYY--SPGGEAAFQREVHLISVAIHK 329
N+ +G+G FGKV + KVA+K + + +RE+ + + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYL 389
++++L + E I+V + N Y ++ K E+ +R +EY
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIISAVEYC 128
Query: 390 HEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV-DAKLTHVTTQIRGTMGHIAPEY 448
H KI+HRDLK N+LLD++ + DFGL+ ++ D + G+ + APE
Sbjct: 129 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEV 182
Query: 449 LSTGK--SSEKTDVFGYGITLLELVTGQRAID 478
+S GK + + DV+ G+ L ++ + D
Sbjct: 183 IS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 273 NFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYY--SPGGEAAFQREVHLISVAIHK 329
N+ +G+G FGKV + KVA+K + + +RE+ + + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYL 389
++++L + E I+V + N Y ++ K E+ +R +EY
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIISAVEYC 129
Query: 390 HEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV-DAKLTHVTTQIRGTMGHIAPEY 448
H KI+HRDLK N+LLD++ + DFGL+ ++ D + G+ + APE
Sbjct: 130 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEV 183
Query: 449 LSTGK--SSEKTDVFGYGITLLELVTGQRAID 478
+S GK + + DV+ G+ L ++ + D
Sbjct: 184 IS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 280 IGQGGFGKVYKGVLSDNTK-VAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
IG+G +G V+K + + VA+KR++ D G ++ RE+ L+ HKN+++L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 338 CTTSSERILVYPFM-QNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPK 396
+ + LV+ F Q+L + D G+ LD K F GL + H +
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYF---DSCNGD--LDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 397 IIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK-SS 455
++HRDLK N+L++ N E L +FGLA+ + + ++ T+ + P+ L K S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 456 EKTDVFGYGITLLELVTGQRAI 477
D++ G EL R +
Sbjct: 181 TSIDMWSAGCIFAELANAGRPL 202
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
+++ IG+G +G V Y V T+VA+K++ + RE+ ++ H+N
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 331 LLQLIGYCTTSSERIL--VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
++ + S+ + VY +Q+L + LK + D + GL+Y
Sbjct: 103 VIGIRDILRASTLEAMRDVY-IVQDLMETDLYKLLKSQQLSNDHICY--FLYQILRGLKY 159
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGHIAP 446
+H + ++HRDLK +N+L++ + +CDFGLA++ D + H T+ T + AP
Sbjct: 160 IH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 447 EYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
E + K K+ D++ G L E+++ +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 25/229 (10%)
Query: 266 ELQLATDNFSESNIIGQGGFGKV-----YKGVLSDNT-KVAVKRLQDYYSPGGEAAFQRE 319
+ + + S +G G FGKV Y + SD VAVK L+ A E
Sbjct: 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSE 76
Query: 320 VHLIS-VAIHKNLLQLIGYCTTSSERILVYPFM---QNLSVAYRLRD-----------LK 364
+ ++S + H N++ L+G CT +++ + L+ R RD ++
Sbjct: 77 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 136
Query: 365 PGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK 424
E LD ++ A G+ +L + IHRDL A NILL +CDFGLA+
Sbjct: 137 DDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 193
Query: 425 LVDAKLTHVTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
+ +V R + +APE + + ++DV+ YGI L EL +
Sbjct: 194 DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA++++ + RE+ ++ H+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 89 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T +
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ +S+ +D++ G + +LV G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNL 331
+++++ +IG G FG VY+ L D+ + VA+K++ G+A RE+ ++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 332 LQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTAY 384
++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLV---DAKLTHVTTQIRGT 440
L Y+H I HRD+K N+LLD + + LCDFG AK + + ++++ ++
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 187
Query: 441 MGHIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 271 TDNFSESNIIGQGGFGKVY---KGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+D + ++G+G FG+V + V V + + + REV L+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLD-WPTRKRVAFGTAY-- 384
H N+++L Y F ++ Y + ++ G + D +RKR + A
Sbjct: 85 HPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 131
Query: 385 ------GLEYLHEQCNPKIIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTT 435
G+ Y+H+ KI+HRDLK N+LL+ + + DFGL+ +A +
Sbjct: 132 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKD 187
Query: 436 QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+I GT +IAPE L G EK DV+ G+ L L++G
Sbjct: 188 KI-GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNL 331
+++++ +IG G FG VY+ L D+ + VA+K++ G+A RE+ ++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 332 LQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTAY 384
++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLV---DAKLTHVTTQIRGT 440
L Y+H I HRD+K N+LLD + + LCDFG AK + + ++++ ++
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 187
Query: 441 MGHIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 47/223 (21%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
F ++GQG FGKV+ VK++ G +A R+++ + V + K L
Sbjct: 25 QFELLKVLGQGSFGKVF----------LVKKIS-----GSDA---RQLYAMKV-LKKATL 65
Query: 333 QLIGYCTTSSER-ILV---YPFMQNLSVAY----RLRDLKPGEKGLDWPTR--KRVAFGT 382
++ T ER ILV +PF+ L A+ +L + +G D TR K V F
Sbjct: 66 KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE 125
Query: 383 ----------AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTH 432
A L++LH II+RDLK NILLD+ L DFGL+K + H
Sbjct: 126 EDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDH 179
Query: 433 VTTQIR--GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
GT+ ++APE ++ ++ D + +G+ + E++TG
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 47/223 (21%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
F ++GQG FGKV+ VK++ G +A R+++ + V + K L
Sbjct: 25 QFELLKVLGQGSFGKVF----------LVKKIS-----GSDA---RQLYAMKV-LKKATL 65
Query: 333 QLIGYCTTSSER-ILV---YPFMQNLSVAY----RLRDLKPGEKGLDWPTR--KRVAFGT 382
++ T ER ILV +PF+ L A+ +L + +G D TR K V F
Sbjct: 66 KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE 125
Query: 383 ----------AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTH 432
A L++LH II+RDLK NILLD+ L DFGL+K + H
Sbjct: 126 EDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDH 179
Query: 433 VTTQIR--GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
GT+ ++APE ++ ++ D + +G+ + E++TG
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 47/223 (21%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
F ++GQG FGKV+ VK++ G +A R+++ + V + K L
Sbjct: 26 QFELLKVLGQGSFGKVF----------LVKKIS-----GSDA---RQLYAMKV-LKKATL 66
Query: 333 QLIGYCTTSSER-ILV---YPFMQNLSVAY----RLRDLKPGEKGLDWPTR--KRVAFGT 382
++ T ER ILV +PF+ L A+ +L + +G D TR K V F
Sbjct: 67 KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE 126
Query: 383 ----------AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTH 432
A L++LH II+RDLK NILLD+ L DFGL+K + H
Sbjct: 127 EDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDH 180
Query: 433 VTTQIR--GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
GT+ ++APE ++ ++ D + +G+ + E++TG
Sbjct: 181 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 271 TDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYS--PGGEAAFQREVHLISVAI 327
+D + I+G GG +V+ L D+ VAVK L+ + P F+RE +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 328 HKNLLQLIGYCTTSSERI---LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H ++ + Y T +E L Y M+ + LRD+ E + V
Sbjct: 71 HPAIVAV--YDTGEAETPAGPLPYIVMEYVD-GVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMG 442
L + H+ IIHRD+K ANI++ + DFG+A+ + V T + GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+++PE ++DV+ G L E++TG+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 271 TDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYS--PGGEAAFQREVHLISVAI 327
+D + I+G GG +V+ L D+ VAVK L+ + P F+RE +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 328 HKNLLQLIGYCTTSSERI---LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H ++ + Y T +E L Y M+ + LRD+ E + V
Sbjct: 71 HPAIVAV--YDTGEAETPAGPLPYIVMEYVD-GVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMG 442
L + H+ IIHRD+K ANI++ + DFG+A+ + V T + GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+++PE ++DV+ G L E++TG+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI--HKNLLQLIGY 337
IG+G +G+V+ G KVAVK + EA++ RE + + H+N+L I
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVK----VFFTTEEASWFRETEIYQTVLMRHENILGFIAA 99
Query: 338 ----CTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHE-- 391
+ ++ L+ + +N S+ L+ LD + ++A+ + GL +LH
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKSTT-----LDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 392 ---QCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDAKLTHVTTQIR-GTMGHIA 445
Q P I HRDLK+ NIL+ N + D GLA + D + R GT ++
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 446 PEYLSTG------KSSEKTDVFGYGITLLEL 470
PE L +S D++ +G+ L E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNL 331
+++++ +IG G FG VY+ L D+ + VA+K++ G+A RE+ ++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----GKAFKNRELQIMRKLDHCNI 75
Query: 332 LQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTAY 384
++L + +S E+ LV ++ + YR+ R ++ L K +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVP--ATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMGH 443
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ + +
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYY 188
Query: 444 IAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
APE + + DV+ G L EL+ GQ
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 271 TDNFSESNIIGQGGFGKVY---KGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+D + ++G+G FG+V + V V + + + REV L+
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLD-WPTRKRVAFGTAY-- 384
H N+++L Y F ++ Y + ++ G + D +RKR + A
Sbjct: 91 HPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 137
Query: 385 ------GLEYLHEQCNPKIIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTT 435
G+ Y+H+ KI+HRDLK N+LL+ + + DFGL+ +A +
Sbjct: 138 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKD 193
Query: 436 QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+I GT +IAPE L G EK DV+ G+ L L++G
Sbjct: 194 KI-GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
+G+G G+V V VAVK + + ++E+ + + H+N+++ G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E + Y F++ S ++P + G+ P +R G+ YLH I
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGHIAPEYLSTGK-SSE 456
HRD+K N+LLD+ + DFGLA + + ++ GT+ ++APE L + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 457 KTDVFGYGITLLELVTGQRAID 478
DV+ GI L ++ G+ D
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWD 208
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 11/259 (4%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYS--PGGEAAFQREVHLISVAIHKNLLQLIGY 337
IG G +G+ K + K+ V + DY S + EV+L+ H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 338 CT--TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
T++ +V + + +A + + LD RV L+ H + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 396 --KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++HRDLK AN+ LD L DFGLA++++ + GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-EDFAKEFVGTPYYMSPEQMNRMS 192
Query: 454 SSEKTDVFGYGITLLELVTGQRAID-FSRXXXXXXXXXXXHIRKLLR-EDRLNDIVDR-- 509
+EK+D++ G L EL FS+ R R D LN+I+ R
Sbjct: 193 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRML 252
Query: 510 NLNTYDSKEVETMVQVALL 528
NL Y VE +++ L+
Sbjct: 253 NLKDYHRPSVEEILENPLI 271
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 20/223 (8%)
Query: 263 SCRELQLATDNFSESNIIGQGGFGKVY--KGVLSDNTKVAVKRL-QDYYSPGGEAAFQRE 319
S + Q N+ IG+G F KV + VL+ +VAVK + + +P RE
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFRE 64
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRKRV 378
V ++ + H N+++L T LV + V Y + + EK R+ V
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 124
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDAKLTHVTTQ 436
+ ++Y H++ I+HRDLKA N+LLD + + DFG + V KL
Sbjct: 125 S-----AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC-- 174
Query: 437 IRGTMGHIAPEYLSTGK-SSEKTDVFGYGITLLELVTGQRAID 478
G+ + APE K + DV+ G+ L LV+G D
Sbjct: 175 --GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 271 TDNFSESNIIGQGGFGKVY---KGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+D + ++G+G FG+V + V V + + + REV L+
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLD-WPTRKRVAFGTAY-- 384
H N+++L Y F ++ Y + ++ G + D +RKR + A
Sbjct: 108 HPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 154
Query: 385 ------GLEYLHEQCNPKIIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTT 435
G+ Y+H+ KI+HRDLK N+LL+ + + DFGL+ +A +
Sbjct: 155 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKD 210
Query: 436 QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+I GT +IAPE L G EK DV+ G+ L L++G
Sbjct: 211 KI-GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 271 TDNFSESNIIGQGGFGKVY---KGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+D + ++G+G FG+V + V V + + + REV L+
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLD-WPTRKRVAFGTAY-- 384
H N+++L Y F ++ Y + ++ G + D +RKR + A
Sbjct: 109 HPNIMKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 155
Query: 385 ------GLEYLHEQCNPKIIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTT 435
G+ Y+H+ KI+HRDLK N+LL+ + + DFGL+ +A +
Sbjct: 156 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKD 211
Query: 436 QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+I GT +IAPE L G EK DV+ G+ L L++G
Sbjct: 212 KI-GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 89 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H + T +
Sbjct: 141 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDN-TKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ + IG+G +G V + N +VA+K++ + RE+ ++ H+N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 333 QLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-------G 385
+ I+ P ++ + Y ++DL + T+ Y G
Sbjct: 90 GI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMGH 443
L+Y+H + ++HRDLK +N+LL+ + +CDFGLA++ D H + T +
Sbjct: 142 LKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 444 IAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
APE + K K+ D++ G L E+++ +
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 29/223 (13%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAF--------- 316
EL ++ I G +G V GV S+ VA+KR+ + S G
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 317 -QREVHLISVAIHKNLLQL----IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLD 371
RE+ L++ H N+L L + + + ++ + + +A + D ++ +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD----QRIVI 131
Query: 372 WPTR-KRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDA 428
P + + GL LHE ++HRDL NILL DN + +CDF LA+ DA
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
Query: 429 KLTHVTTQIRGTMGHIAPEYLSTGKSSEK-TDVFGYGITLLEL 470
TH T + APE + K K D++ G + E+
Sbjct: 189 NKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 29/223 (13%)
Query: 266 ELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAF--------- 316
EL ++ I G +G V GV S+ VA+KR+ + S G
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 317 -QREVHLISVAIHKNLLQL----IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLD 371
RE+ L++ H N+L L + + + ++ + + +A + D ++ +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD----QRIVI 131
Query: 372 WPTR-KRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDA 428
P + + GL LHE ++HRDL NILL DN + +CDF LA+ DA
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188
Query: 429 KLTHVTTQIRGTMGHIAPEYLSTGKSSEK-TDVFGYGITLLEL 470
TH T + APE + K K D++ G + E+
Sbjct: 189 NKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRLQD--YYSPGGEAAFQREVHLIS 324
+L DNF ++G+G FGKV + + + AVK L+ E ++S
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 325 VAIHKNLLQLIGYCTTSSERIL-VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTA 383
+A + L + C + +R+ V F+ + + ++ + D + A
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEII 134
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGTMG 442
L +LH++ II+RDLK N+LLD L DFG+ K + VTT GT
Sbjct: 135 SALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPD 189
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+IAPE L D + G+ L E++ G
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 280 IGQGGFGK-VYKGVLSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
IG+G FGK + D + +K + S +REV +++ H N++Q
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLK----PGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
+ +V + + + R+ K ++ LDW + L+++H++
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ------ICLALKHVHDR- 144
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
KI+HRD+K+ NI L + L DFG+A+++++ + I GT +++PE
Sbjct: 145 --KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEICENKP 201
Query: 454 SSEKTDVFGYGITLLELVTGQRAID 478
+ K+D++ G L EL T + A +
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IGQG G VY + ++ +VA++++ P E E+ ++ + N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN-EILVMRENKNPNIVNYLDSY 86
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E +V ++ S L D+ E +D V LE+LH ++I
Sbjct: 87 LVGDELWVVMEYLAGGS----LTDVV-TETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRD+K+ NILL + L DFG + + + +T + GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 459 DVFGYGITLLELVTGQ 474
D++ GI +E++ G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 45/237 (18%)
Query: 267 LQLATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQDYYSPGGEAAFQREVHLISV 325
L+ A+D F E ++GQG FG+V K + D+ A+K+++ ++ + EV L++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR--HTEEKLSTILSEVXLLAS 58
Query: 326 AIHKNLLQLIGYCTTSSERILVYP----------FMQNLSVAYR-LRDLKPGE-----KG 369
H+ +++ Y R V P F+Q R L DL E +
Sbjct: 59 LNHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD 116
Query: 370 LDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAK 429
W R+ L Y+H Q IIHR+LK NI +D++ + DFGLAK V
Sbjct: 117 EYW----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 430 L--------------THVTTQIRGTMGHIAPEYLS-TGKSSEKTDVFGYGITLLELV 471
L ++T+ I GT ++A E L TG +EK D + GI E +
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y + L + T+ Y
Sbjct: 103 IIGI--------NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H ++HRDLK +N+LL+ + +CDFGLA++ D H T+ T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L ++P + D+ T +
Sbjct: 61 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERMEPVQDLFDFITERGALQEE 114
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 115 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 169
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 28/223 (12%)
Query: 273 NFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNL 331
+F +G+GGFG V++ D+ A+KR++ REV ++ H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 332 LQLIG---------YCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK---RVA 379
++ SS ++ +Y MQ L L+D G ++ R +
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ-LCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 380 FGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAK------LTHV 433
A +E+LH + ++HRDLK +NI + + DFGL +D LT +
Sbjct: 125 LQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 434 TTQIR-----GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
R GT +++PE + S K D+F G+ L EL+
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYS---PGGEAAFQREVH 321
R LQ+ +++ +IG+G FG+V + KV +L + A F E
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+++ A ++QL +C ++ L Y M+ + DL D P K F
Sbjct: 128 IMAFANSPWVVQL--FCAFQDDKYL-YMVMEYMPGG----DLVNLMSNYDVP-EKWAKFY 179
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGT 440
TA + L + +IHRD+K N+LLD + L DFG K+ + + H T + GT
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GT 238
Query: 441 MGHIAPEYLST----GKSSEKTDVFGYGITLLELVTG 473
+I+PE L + G + D + G+ L E++ G
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 46/227 (20%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+F+ ++G+G FGKV +L+D G E + ++ V I + +
Sbjct: 20 DFNFLMVLGKGSFGKV---MLADRK-------------GTEELYAIKILKKDVVIQDDDV 63
Query: 333 QLIGYCTTSSERILVY----PFMQNLSVAY----RLRDLKPGEKGLDW------------ 372
+ CT +R+L PF+ L + RL + G D
Sbjct: 64 E----CTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE 119
Query: 373 PTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTH 432
P A + GL +LH++ II+RDLK N++LD + DFG+ K + +
Sbjct: 120 PQAVFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDG 174
Query: 433 VTT-QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
VTT + GT +IAPE ++ + D + YG+ L E++ GQ D
Sbjct: 175 VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 26/205 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ V HKN++ L+
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 336 GYCTTS---SERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T E VY M+ NLS ++ LD + + G+++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--------LDHERMSYLLYQMLVGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELVTG 473
+ E D++ G+ + E++ G
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 26/205 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ V HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 336 GYCTTS---SERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T E VY M+ NLS ++ LD + + G+++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--------LDHERMSYLLYQMLVGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELVTG 473
+ E D++ G+ + E++ G
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 47/223 (21%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLL 332
+F ++GQG FGKV+ V+++ P + +V + K L
Sbjct: 29 HFELLKVLGQGSFGKVF----------LVRKVT---RPDSGHLYAMKV------LKKATL 69
Query: 333 QLIGYCTTSSERILV----YPFMQNLSVAY----RLRDLKPGEKGLDWPTR--KRVAFGT 382
++ T ER ++ +PF+ L A+ +L + +G D TR K V F
Sbjct: 70 KVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE 129
Query: 383 ----------AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTH 432
A GL++LH II+RDLK NILLD+ L DFGL+K + H
Sbjct: 130 EDVKFYLAELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDH 183
Query: 433 VTTQIR--GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
GT+ ++APE ++ S D + YG+ + E++TG
Sbjct: 184 EKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 272 DNFSESNIIGQGGFGKVYKG-VLSDNTKVAVKRLQDYY--SPGGEAAFQREVHLISVAIH 328
++F I+G+G F V L+ + + A+K L+ + RE ++S H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 329 KNLLQLIGYCTTSSERILV-YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
++L +C E++ + +N + +R + D + LE
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALE 151
Query: 388 YLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGHIAP 446
YLH + IIHRDLK NILL+++ + DFG AK++ + GT +++P
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 447 EYLSTGKSSEKTDVFGYGITLLELVTG 473
E L+ + + +D++ G + +LV G
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCREL---QLATDNFSE--------SNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 122
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 123 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 180
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 181 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
Query: 472 TG 473
G
Sbjct: 238 CG 239
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 20/213 (9%)
Query: 273 NFSESNIIGQGGFGKVY--KGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHK 329
N+ IG+G F KV + +L+ +VA+K + + +P REV ++ + H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
N+++L T L+ + V Y + + EK R+ V+ ++Y
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-----AVQY 126
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDAKLTHVTTQIRGTMGHIAP 446
H++ +I+HRDLKA N+LLD + + DFG + V KL G+ + AP
Sbjct: 127 CHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC----GSPPYAAP 179
Query: 447 EYLSTGK-SSEKTDVFGYGITLLELVTGQRAID 478
E K + DV+ G+ L LV+G D
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 33/176 (18%)
Query: 313 EAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDW 372
E +Q E+ ++ H N+++L+ +L P +L + + L + P ++
Sbjct: 81 EQVYQ-EIAILKKLDHPNVVKLV--------EVLDDPNEDHLYMVFELVNQGPV---MEV 128
Query: 373 PTRKRVAFGTAY--------GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA- 423
PT K ++ A G+EYLH Q KIIHRD+K +N+L+ ++ + DFG++
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSN 185
Query: 424 --KLVDAKLTHVTTQIRGTMGHIAPEYLSTGK---SSEKTDVFGYGITLLELVTGQ 474
K DA L++ GT +APE LS + S + DV+ G+TL V GQ
Sbjct: 186 EFKGSDALLSNTV----GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 277 SNIIGQGGFGKVYKGVLSDNT--KVAVKRLQDYYS---PGGEAAFQREVHLISVAIHKNL 331
+++G+G +GKV K VL T + AVK L+ P GEA ++E+ L+ HKN+
Sbjct: 10 GDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 332 LQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------- 384
+QL+ + E+ +Y M+ ++ LD KR A+
Sbjct: 69 IQLVD-VLYNEEKQKMYMVMEYCVCGM--------QEMLDSVPEKRFPVCQAHGYFCQLI 119
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
GLEYLH Q I+H+D+K N+LL + G+A+ + T +
Sbjct: 120 DGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 444 IAPEYLSTGK---SSEKTDVFGYGITLLELVTG 473
P ++ G S K D++ G+TL + TG
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
LE+LH+ II+RD+K NILLD N VL DFGL+K A T GT+ ++
Sbjct: 171 ALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 445 APEYLSTGKSS--EKTDVFGYGITLLELVTG 473
AP+ + G S + D + G+ + EL+TG
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCREL---QLATDNFSE--------SNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 122
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 123 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 180
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 181 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
Query: 472 TG 473
G
Sbjct: 238 CG 239
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCREL---QLATDNFSE--------SNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 121
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 122 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 179
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 180 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
Query: 472 TG 473
G
Sbjct: 237 CG 238
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 126 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV-TTQIRGTMGH 443
LEYLH + IIHRDLK NILL+++ + DFG AK++ + GT +
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++PE L+ + + +D++ G + +LV G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCREL---QLATDNFSE--------SNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 121
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 122 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 179
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 180 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
Query: 472 TG 473
G
Sbjct: 237 CG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCREL---QLATDNFSE--------SNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 122
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 123 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 180
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 181 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
Query: 472 TG 473
G
Sbjct: 238 CG 239
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCRELQLAT-----------DNFSESNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L + ++G GGFG VY G+ +SDN VA+K
Sbjct: 23 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 82
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 83 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 136
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 137 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 194
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 195 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 472 TG 473
G
Sbjct: 252 CG 253
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCREL---QLATDNFSE--------SNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 121
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 122 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 179
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 180 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
Query: 472 TG 473
G
Sbjct: 237 CG 238
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCREL---QLATDNFSE--------SNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 23 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 82
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 83 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 136
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 137 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 194
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 195 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 472 TG 473
G
Sbjct: 252 CG 253
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCREL---QLATDNFSE--------SNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 9 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 68
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 69 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 122
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 123 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 180
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 181 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
Query: 472 TG 473
G
Sbjct: 238 CG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCREL---QLATDNFSE--------SNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 8 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 67
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 68 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 121
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 122 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 179
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 180 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
Query: 472 TG 473
G
Sbjct: 237 CG 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 255 SLTQLRRFSCREL---QLATDNFSE--------SNIIGQGGFGKVYKGV-LSDNTKVAVK 302
SL LR C +L +LA E ++G GGFG VY G+ +SDN VA+K
Sbjct: 28 SLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 87
Query: 303 RLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLR 361
++ D S GE V + V LL+ + + R+L + F + S L
Sbjct: 88 HVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILE 141
Query: 362 DLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF 413
+P + D+ T + R F LE + N ++HRD+K NIL+D N
Sbjct: 142 RPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNR 199
Query: 414 -EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELV 471
E L DFG L+ V T GT + PE++ + ++ V+ GI L ++V
Sbjct: 200 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 256
Query: 472 TG 473
G
Sbjct: 257 CG 258
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 271 TDNFSESNIIGQGGFGKVYKGV---LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+D + I+G GG +V+ L + V V R P F+RE +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 328 HKNLLQLIGYCTTSSERI---LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H ++ + Y T +E L Y M+ + LRD+ E + V
Sbjct: 71 HPAIVAV--YATGEAETPAGPLPYIVMEYVD-GVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMG 442
L + H+ IIHRD+K ANI++ + DFG+A+ + V T + GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+++PE ++DV+ G L E++TG+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 279 IIGQGGFGKVYK-GVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLIG 336
++G+G FG+V K + AVK + + + + REV L+ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 337 YCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPK 396
SS +V L L D K R+ G+ Y+H+
Sbjct: 89 ILEDSSSFYIV----GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 397 IIHRDLKAANILLDD---NFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
I+HRDLK NILL+ + + + DFGL+ T + +I GT +IAPE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPEVLR-GT 198
Query: 454 SSEKTDVFGYGITLLELVTG 473
EK DV+ G+ L L++G
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLIS 324
+A ++ + I+G+G FG+VY+GV +++ VAVK + + + F E ++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 325 VAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
H ++++LIG I++ YP+ + + + L K K L T +
Sbjct: 65 NLDHPHIVKLIGIIEEEPTWIIMELYPYGE---LGHYLERNKNSLKVL---TLVLYSLQI 118
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
+ YL E N +HRD+ NIL+ L DFGL++ ++ + + + R +
Sbjct: 119 CKAMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 175
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
++PE ++ + + +DV+ + + + E+++
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 108
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLV---DAKLTHVTTQIRG 439
L Y+H I HRD+K N+LLD + + LCDFG AK + + ++++ ++
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 221
Query: 440 TMGHIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 87
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLV---DAKLTHVTTQIRG 439
L Y+H I HRD+K N+LLD + + LCDFG AK + + ++++ ++
Sbjct: 146 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 200
Query: 440 TMGHIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 201 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 294 SDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQN 353
S+N K+++K D F+ E+ +I+ ++ L G T E ++Y +M+N
Sbjct: 76 SNNDKISIKSKYD--------DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEN 127
Query: 354 LSV----AYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILL 409
S+ Y K + K + Y+H + N I HRD+K +NIL+
Sbjct: 128 DSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILM 185
Query: 410 DDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSE--KTDVFGYGIT 466
D N L DFG ++ +VD K+ RGT + PE+ S S K D++ GI
Sbjct: 186 DKNGRVKLSDFGESEYMVDKKIKGS----RGTYEFMPPEFFSNESSYNGAKVDIWSLGIC 241
Query: 467 L 467
L
Sbjct: 242 L 242
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 102
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLV---DAKLTHVTTQIRG 439
L Y+H I HRD+K N+LLD + + LCDFG AK + + ++++ ++
Sbjct: 161 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 215
Query: 440 TMGHIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 216 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 74
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLV---DAKLTHVTTQIRG 439
L Y+H I HRD+K N+LLD + + LCDFG AK + + ++++ ++
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 440 TMGHIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLIS 324
+A ++ + I+G+G FG+VY+GV +++ VAVK + + + F E ++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 325 VAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
H ++++LIG I++ YP+ + + + L K K L T +
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWIIMELYPYGE---LGHYLERNKNSLKVL---TLVLYSLQI 122
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
+ YL E N +HRD+ NIL+ L DFGL++ ++ + + + R +
Sbjct: 123 CKAMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 179
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
++PE ++ + + +DV+ + + + E+++
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDN----TKVAVKRLQDYYSPGGEAAFQREVHLIS 324
+A ++ + I+G+G FG+VY+GV +++ VAVK + + + F E ++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 325 VAIHKNLLQLIGYCTTSSERILV--YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
H ++++LIG I++ YP+ + + + L K K L T +
Sbjct: 81 NLDHPHIVKLIGIIEEEPTWIIMELYPYGE---LGHYLERNKNSLKVL---TLVLYSLQI 134
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
+ YL E N +HRD+ NIL+ L DFGL++ ++ + + + R +
Sbjct: 135 CKAMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 191
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
++PE ++ + + +DV+ + + + E+++
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 79
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLV---DAKLTHVTTQIRG 439
L Y+H I HRD+K N+LLD + + LCDFG AK + + ++++ ++
Sbjct: 138 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 440 TMGHIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 193 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
++ + IG+G +G V Y V + +VA+K++ + RE+ ++ H+N
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY------ 384
++ + I+ P ++ + Y ++DL + T+ Y
Sbjct: 83 IIGI--------NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 385 -GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTM 441
GL+Y+H + ++HRDLK +N+LL+ + + DFGLA++ D H T+ T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTGQ 474
+ APE + K K+ D++ G L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 279 IIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIG 336
++G GGFG VY G+ +SDN VA+K ++ D S GE V + V LL+ +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 65
Query: 337 YCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--------RVAFGTAYGLEY 388
+ R+L + F + S L +P + D+ T + R F LE
Sbjct: 66 SGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV--LEA 122
Query: 389 LHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE 447
+ N ++HRD+K NIL+D N E L DFG L+ V T GT + PE
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 179
Query: 448 YLSTGKSSEKT-DVFGYGITLLELVTG 473
++ + ++ V+ GI L ++V G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 76 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 129
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 130 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 184
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IGQG G VY + ++ +VA++++ P E E+ ++ + N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN-EILVMRENKNPNIVNYLDSY 86
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E +V ++ S L D+ E +D V LE+LH ++I
Sbjct: 87 LVGDELWVVMEYLAGGS----LTDVV-TETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRD+K+ NILL + L DFG + + + +++ GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 459 DVFGYGITLLELVTGQ 474
D++ GI +E++ G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 110
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLV---DAKLTHVTTQIRG 439
L Y+H I HRD+K N+LLD + + LCDFG AK + + ++++ ++
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 223
Query: 440 TMGHIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 224 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 77 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 130
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 131 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 185
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 112
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLV---DAKLTHVTTQIRG 439
L Y+H I HRD+K N+LLD + + LCDFG AK + + ++++ ++
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 440 TMGHIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 226 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 96 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 149
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 150 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 204
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 205 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 153
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLV---DAKLTHVTTQIRG 439
L Y+H I HRD+K N+LLD + + LCDFG AK + + ++++ ++
Sbjct: 212 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 266
Query: 440 TMGHIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 267 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IGQG G VY + ++ +VA++++ P E E+ ++ + N++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN-EILVMRENKNPNIVNYLDSY 87
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E +V ++ S L D+ E +D V LE+LH ++I
Sbjct: 88 LVGDELWVVMEYLAGGS----LTDVV-TETCMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HR++K+ NILL + L DFG + + + +T + GT +APE ++ K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 459 DVFGYGITLLELVTGQ 474
D++ GI +E++ G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 77 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 130
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 131 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 185
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 76 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 129
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 130 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 184
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IGQG G VY + ++ +VA++++ P E E+ ++ + N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN-EILVMRENKNPNIVNYLDSY 86
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E +V ++ S L D+ E +D V LE+LH ++I
Sbjct: 87 LVGDELWVVMEYLAGGS----LTDVV-TETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRD+K+ NILL + L DFG + + + + + GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 459 DVFGYGITLLELVTGQ 474
D++ GI +E++ G+
Sbjct: 198 DIWSLGIMAIEMIEGE 213
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 272 DNFSESNIIGQGGFGKV-YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
DNF + IG+G G V V S VAVK++ E F EV ++ H+N
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHEN 78
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
++++ E +V F++ ++ + + E+ + V L LH
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLH 133
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLS 450
Q +IHRD+K+ +ILL + L DFG V ++ + GT +APE +S
Sbjct: 134 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELIS 189
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
+ D++ GI ++E+V G+
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 61 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 114
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 115 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 169
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 62 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 115
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 116 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 170
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IGQG G VY + ++ +VA++++ P E E+ ++ + N++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN-EILVMRENKNPNIVNYLDSY 87
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E +V ++ S L D+ E +D V LE+LH ++I
Sbjct: 88 LVGDELWVVMEYLAGGS----LTDVV-TETCMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRD+K+ NILL + L DFG + + + + + GT +APE ++ K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 459 DVFGYGITLLELVTGQ 474
D++ GI +E++ G+
Sbjct: 199 DIWSLGIMAIEMIEGE 214
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 77 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 130
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 131 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 185
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 62 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 115
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 116 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 170
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 279 IIGQGGFGKVYK-GVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLIG 336
++G+G FG+V K + AVK + + + + REV L+ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 337 YCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPK 396
SS +V L L D K R+ G+ Y+H+
Sbjct: 89 ILEDSSSFYIV----GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 397 IIHRDLKAANILLDD---NFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
I+HRDLK NILL+ + + + DFGL+ T + +I GT +IAPE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPEVLR-GT 198
Query: 454 SSEKTDVFGYGITLLELVTG 473
EK DV+ G+ L L++G
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 272 DNFSESNIIGQGGFGKV-YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
DNF + IG+G G V V S VAVK++ E F EV ++ H+N
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHEN 87
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
++++ E +V F++ ++ + + E+ + V L LH
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLS 450
Q +IHRD+K+ +ILL + L DFG V ++ + GT +APE +S
Sbjct: 143 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELIS 198
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
+ D++ GI ++E+V G+
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 272 DNFSESNIIGQGGFGKV-YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
DNF + IG+G G V V S VAVK++ E F EV ++ H+N
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHEN 89
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
++++ E +V F++ ++ + + E+ + V L LH
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLH 144
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLS 450
Q +IHRD+K+ +ILL + L DFG V ++ + GT +APE +S
Sbjct: 145 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELIS 200
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
+ D++ GI ++E+V G+
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 62 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 115
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 116 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 170
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 279 IIGQGGFGKVYK-GVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLIG 336
++G+G FG+V K + AVK + + + + REV L+ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 337 YCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPK 396
SS +V L L D K R+ G+ Y+H+
Sbjct: 89 ILEDSSSFYIV----GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 397 IIHRDLKAANILLDD---NFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
I+HRDLK NILL+ + + + DFGL+ T + +I GT +IAPE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPEVLR-GT 198
Query: 454 SSEKTDVFGYGITLLELVTG 473
EK DV+ G+ L L++G
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 279 IIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIG 336
++G GGFG VY G+ +SDN VA+K ++ D S GE V + V LL+ +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 65
Query: 337 YCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--------RVAFGTAYGLEY 388
+ R+L + F + S L +P + D+ T + R F LE
Sbjct: 66 SGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV--LEA 122
Query: 389 LHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE 447
+ N ++HRD+K NIL+D N E L DFG L+ V T GT + PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 179
Query: 448 YLSTGKSSEKT-DVFGYGITLLELVTG 473
++ + ++ V+ GI L ++V G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 272 DNFSESNIIGQGGFGKV-YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
DNF + IG+G G V V S VAVK++ E F EV ++ H+N
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHEN 82
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
++++ E +V F++ ++ + + E+ + V L LH
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLH 137
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLS 450
Q +IHRD+K+ +ILL + L DFG V ++ + GT +APE +S
Sbjct: 138 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELIS 193
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
+ D++ GI ++E+V G+
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHL 322
+E + + ++G GGFG VY G+ +SDN VA+K ++ D S GE V +
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------ 376
V LL+ + + R+L + F + S L +P + D+ T +
Sbjct: 84 EVV-----LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEE 137
Query: 377 --RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHV 433
R F LE + N ++HRD+K NIL+D N E L DFG L+ V
Sbjct: 138 LARSFFWQV--LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---V 192
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
T GT + PE++ + ++ V+ GI L ++V G
Sbjct: 193 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 271 TDNFSESNIIGQGGFGKVY---KGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+D + ++G+G FG+V + V V + + + REV L+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWP-TRKRVAFGTAY-- 384
H N+ +L Y F ++ Y + ++ G + D +RKR + A
Sbjct: 85 HPNIXKL-------------YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 131
Query: 385 ------GLEYLHEQCNPKIIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTT 435
G+ Y H+ KI+HRDLK N+LL+ + + DFGL+ +A +
Sbjct: 132 IRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKXK 186
Query: 436 QIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
GT +IAPE L G EK DV+ G+ L L++G
Sbjct: 187 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ V HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 336 GYCTTS---SERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T E VY M+ NLS ++ LD + + G+++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--------LDHERMSYLLYQMLVGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELVTG 473
+ E D++ G + E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 24/205 (11%)
Query: 279 IIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQR--EVHLISV-------AIH 328
+IG+G FGKV ++ AVK LQ +A ++ E H++S H
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQK------KAILKKKEEKHIMSERNVLLKNVKH 98
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
L+ L T+ + V ++ + Y L+ E+ P + A A L Y
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGY 154
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH I++RDLK NILLD VL DFGL K + + T+ GT ++APE
Sbjct: 155 LHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEV 210
Query: 449 LSTGKSSEKTDVFGYGITLLELVTG 473
L D + G L E++ G
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 279 IIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIG 336
++G GGFG VY G+ +SDN VA+K ++ D S GE V + V LL+ +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 65
Query: 337 YCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--------RVAFGTAYGLEY 388
+ R+L + F + S L +P + D+ T + R F LE
Sbjct: 66 SGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV--LEA 122
Query: 389 LHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE 447
+ N ++HRD+K NIL+D N E L DFG L+ V T GT + PE
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 179
Query: 448 YLSTGKSSEKT-DVFGYGITLLELVTG 473
++ + ++ V+ GI L ++V G
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 272 DNFSESNIIGQGGFGKV-YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
DNF + IG+G G V V S VAVK++ E F EV ++ H+N
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHEN 209
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
++++ E +V F++ ++ + + E+ + V L LH
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLH 264
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLS 450
Q +IHRD+K+ +ILL + L DFG V ++ + GT +APE +S
Sbjct: 265 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELIS 320
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
+ D++ GI ++E+V G+
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 279 IIGQGGFGKVYKGV-LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIG 336
++G GGFG VY G+ +SDN VA+K ++ D S GE V + V LL+ +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 68
Query: 337 YCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK--------RVAFGTAYGLEY 388
+ R+L + F + S L +P + D+ T + R F LE
Sbjct: 69 SGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV--LEA 125
Query: 389 LHEQCNPKIIHRDLKAANILLDDNF-EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE 447
+ N ++HRD+K NIL+D N E L DFG L+ V T GT + PE
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPE 182
Query: 448 YLSTGKSSEKT-DVFGYGITLLELVTG 473
++ + ++ V+ GI L ++V G
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 74
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 187
Query: 443 HIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 74
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 187
Query: 443 HIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLI 335
+G G +G V Y L KVAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEY 388
T ++ +++ S Y + L + + L + + + GL+Y
Sbjct: 86 DVFTPATS-------IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 138
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE- 447
+H + IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE
Sbjct: 139 IH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV----ATRWYRAPEI 191
Query: 448 YLSTGKSSEKTDVFGYGITLLELVTGQ 474
L+ ++ D++ G + EL+ G+
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 108
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ +
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 221
Query: 443 HIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 82
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ +
Sbjct: 141 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 195
Query: 443 HIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 75
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ +
Sbjct: 134 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 188
Query: 443 HIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 271 TDNFSESNIIGQGGFGKVYKGV---LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+D + I+G GG +V+ L + V V R P F+RE +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 328 HKNLLQLIGYCTTSSERI---LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H ++ + Y T +E L Y M+ + LRD+ E + V
Sbjct: 71 HPAIVAV--YDTGEAETPAGPLPYIVMEYVD-GVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMG 442
L + H+ IIHRD+K ANI++ + DFG+A+ + V T + GT
Sbjct: 128 ALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+++PE ++DV+ G L E++TG+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 74
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 187
Query: 443 HIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 280 IGQGGFGKVYKGVLSDNTKV-AVKRLQDYY--SPGGEAAFQREVHLISVAIHKNLLQLIG 336
+G+G +G V+K + +V AVK++ D + S + F+ + L ++ H+N++ L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 337 YCTTSSER--ILVYPFMQ-NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
++R LV+ +M+ +L R L+P K + V + ++YLH
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHK-------QYVVYQLIKVIKYLHSGG 129
Query: 394 NPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR--------------- 438
++HRD+K +NILL+ + DFGL++ + VT I
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSF-VNIRRVTNNIPLSINENTENFDDDQP 185
Query: 439 ------GTMGHIAPEY-LSTGKSSEKTDVFGYGITLLELVTGQ 474
T + APE L + K ++ D++ G L E++ G+
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 93
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ +
Sbjct: 152 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 206
Query: 443 HIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 78
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ +
Sbjct: 137 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 191
Query: 443 HIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 86
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ +
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 199
Query: 443 HIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLI 335
+G G +G V Y L KVAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEY 388
T ++ +++ S Y + L + + L + + + GL+Y
Sbjct: 94 DVFTPATS-------IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 146
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE- 447
+H + IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE
Sbjct: 147 IH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV----ATRWYRAPEI 199
Query: 448 YLSTGKSSEKTDVFGYGITLLELVTGQ 474
L+ ++ D++ G + EL+ G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 271 TDNFSESNIIGQGGFGKVYKGV---LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+D + I+G GG +V+ L + V V R P F+RE +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 328 HKNLLQLIGYCTTSSERI---LVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
H ++ + Y T +E L Y M+ + LRD+ E + V
Sbjct: 88 HPAIVAV--YDTGEAETPAGPLPYIVMEYVD-GVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHV--TTQIRGTMG 442
L + H+ IIHRD+K ANI++ + DFG+A+ + V T + GT
Sbjct: 145 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
+++PE ++DV+ G L E++TG+
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 272 DNFSESNIIGQGGFGKV-YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
DNF + IG+G G V V S VAVK++ E F EV ++ H+N
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN-EVVIMRDYQHEN 132
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
++++ E +V F++ ++ + + E+ + V L LH
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLH 187
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLS 450
Q +IHRD+K+ +ILL + L DFG V ++ + GT +APE +S
Sbjct: 188 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELIS 243
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
+ D++ GI ++E+V G+
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 26/205 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ V HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 336 GYCTTS---SERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T E VY M+ NLS ++ LD + + G+++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--------LDHERMSYLLYQMLCGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELVTG 473
+ E D++ G + E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 273 NFSESNIIGQGGFGKVYKGVLSDNTK-VAVKR-LQDYYSPGGEAAFQREVHLISVAIHKN 330
+++++ +IG G FG VY+ L D+ + VA+K+ LQD + RE+ ++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCN 86
Query: 331 LLQLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTA 383
+++L + +S E+ LV ++ YR+ R ++ L K +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE--TVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y+H I HRD+K N+LLD + + LCDFG AK + +V+ +
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 199
Query: 443 HIAPEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
+ APE + + DV+ G L EL+ GQ
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLI 335
+G G +G V Y L KVAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEY 388
T ++ +++ S Y + L + + L + + + GL+Y
Sbjct: 94 DVFTPATS-------IEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKY 146
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE- 447
+H + IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE
Sbjct: 147 IH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV----ATRWYRAPEI 199
Query: 448 YLSTGKSSEKTDVFGYGITLLELVTGQ 474
L+ ++ D++ G + EL+ G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT--MG 442
G++YL E +HRDL A N+LL A + DFGL+K + A + Q G +
Sbjct: 139 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
APE ++ K S K+DV+ +G+ + E + GQ+
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT--MG 442
G++YL E +HRDL A N+LL A + DFGL+K + A + Q G +
Sbjct: 139 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
APE ++ K S K+DV+ +G+ + E + GQ+
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT--MG 442
G++YL E +HRDL A N+LL A + DFGL+K + A + Q G +
Sbjct: 123 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 179
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
APE ++ K S K+DV+ +G+ + E + GQ+
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT--MG 442
G++YL E +HRDL A N+LL A + DFGL+K + A + Q G +
Sbjct: 119 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 175
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
APE ++ K S K+DV+ +G+ + E + GQ+
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT--MG 442
G++YL E +HRDL A N+LL A + DFGL+K + A + Q G +
Sbjct: 137 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 193
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
APE ++ K S K+DV+ +G+ + E + GQ+
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 227
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT--MG 442
G++YL E +HRDL A N+LL A + DFGL+K + A + Q G +
Sbjct: 117 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 173
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
APE ++ K S K+DV+ +G+ + E + GQ+
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 207
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT--MG 442
G++YL E +HRDL A N+LL A + DFGL+K + A + Q G +
Sbjct: 129 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 185
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
APE ++ K S K+DV+ +G+ + E + GQ+
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 219
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 270 ATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAI 327
+ D + +G+G +G+VYK + + N VA+KR++ ++ G REV L+
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKP-GEKGLDWPTR--KRVAFGTAY 384
H+N+++L + L++ + +N DLK +K D R K +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN--------DLKKYMDKNPDVSMRVIKSFLYQLIN 143
Query: 385 GLEYLHEQCNPKIIHRDLKAANILL---DDNFEAVL--CDFGLAKLVDAKLTHVTTQIRG 439
G+ + H + + +HRDLK N+LL D + VL DFGLA+ + T +I
Sbjct: 144 GVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII- 199
Query: 440 TMGHIAPEYL 449
T+ + PE L
Sbjct: 200 TLWYRPPEIL 209
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 34/220 (15%)
Query: 273 NFSESNIIGQGGFGKVY--KGVLS---------DNTKVAVKRLQDYYSPGGEAAFQREVH 321
N+ IG+G F KV + +L+ D T++ LQ + REV
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF---------REVR 65
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRKRVAF 380
++ V H N+++L T LV + V Y + + EK R+ V+
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS- 124
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT 440
++Y H++ I+HRDLKA N+LLD + + DFG + + + + G+
Sbjct: 125 ----AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDEFCGS 175
Query: 441 MGHIAPEYLSTGKSSE--KTDVFGYGITLLELVTGQRAID 478
+ APE L GK + + DV+ G+ L LV+G D
Sbjct: 176 PPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 8/198 (4%)
Query: 280 IGQGGFGKVYKGVLSDNT-KVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLIGY 337
IG+G F VYKG+ ++ T +VA LQD E F+ E + H N+++
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKI 397
++ + + L + L+ K + GL++LH + P I
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTR-TPPI 152
Query: 398 IHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSE 456
IHRDLK NI + +V + D GLA L A + GT APE K E
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA---VIGTPEFXAPEXYEE-KYDE 208
Query: 457 KTDVFGYGITLLELVTGQ 474
DV+ +G LE T +
Sbjct: 209 SVDVYAFGXCXLEXATSE 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 377 RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTHVTT 435
++A LE+LH + + +IHRD+K +N+L++ + +CDFG++ LVD+ +
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 436 QIRGTMG--HIAPEYLSTGKSSEKTDVFGYGITLLEL 470
+ M I PE G S K+D++ GIT++EL
Sbjct: 215 GCKPYMAPERINPELNQKGYSV-KSDIWSLGITMIEL 250
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT--MG 442
G++YL E +HRDL A N+LL A + DFGL+K + A + Q G +
Sbjct: 482 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 538
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
APE ++ K S K+DV+ +G+ + E + GQ+
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 572
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT--MG 442
G++YL E +HRDL A N+LL A + DFGL+K + A + Q G +
Sbjct: 481 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 537
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
APE ++ K S K+DV+ +G+ + E + GQ+
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 571
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + K+AVK+L + + S RE+ L+ H+N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 338 CT--TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
T TS E + +L A L ++ +K D + + + GL+Y+H +
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGA-DLNNIVKCQKLTD-DHVQFLIYQILRGLKYIH---SA 173
Query: 396 KIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSS 455
IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE +
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHY 229
Query: 456 EKT-DVFGYGITLLELVTGQ 474
T D++ G + EL+TG+
Sbjct: 230 NMTVDIWSVGCIMAELLTGR 249
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 273 NFSESNIIGQGGFGKVY--KGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHK 329
N+ IG+G F KV + +L+ +VAVK + + + REV ++ V H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
N+++L T LV + V Y + + EK R+ V+ ++Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQY 128
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
H++ I+HRDLKA N+LLD + + DFG + + + G+ + APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPEL 183
Query: 449 LSTGK-SSEKTDVFGYGITLLELVTGQRAID 478
K + DV+ G+ L LV+G D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 273 NFSESNIIGQGGFGKVY--KGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHK 329
N+ IG+G F KV + +L+ +VAVK + + + REV ++ V H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
N+++L T LV + V Y + + EK R+ V+ ++Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQY 128
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
H++ I+HRDLKA N+LLD + + DFG + + + G+ + APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPE- 182
Query: 449 LSTGKSSE--KTDVFGYGITLLELVTGQRAID 478
L GK + + DV+ G+ L LV+G D
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT-QI 437
+F A G+E+L + K IHRDL A NILL + +CDFGLA+ + +V
Sbjct: 199 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 438 RGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKL 497
R + +APE + + ++DV+ +G+ L E+ + R+L
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPYPGVKIDEEFCRRL 309
Query: 498 LREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
R+ Y + E M Q L C P RP +++V+ L
Sbjct: 310 KEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV 347
E+ LI + H N++ L+G CT ++V
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 104
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 12/214 (5%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAA--FQREVHLISV 325
L +F +IG+G + KV L ++ A+K ++ E Q E H+
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 326 AIHKNLLQLIGYCTTSSERIL-VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
A + L + C + R+ V ++ + + ++ ++ L + + +
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISL 117
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L YLHE+ II+RDLK N+LLD L D+G+ K + T+ GT +I
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYI 173
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
APE L D + G+ + E++ G+ D
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT-QI 437
+F A G+E+L + K IHRDL A NILL + +CDFGLA+ + +V
Sbjct: 204 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 438 RGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKL 497
R + +APE + + ++DV+ +G+ L E+ + R+L
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPYPGVKIDEEFCRRL 314
Query: 498 LREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
R+ Y + E M Q L C P RP +++V+ L
Sbjct: 315 KEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV 347
E+ LI + H N++ L+G CT ++V
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 22/222 (9%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYS--PGGEAAFQREVHL 322
++++L ++F +IG+G FG+V L + KV ++ + + E A RE
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 323 ISVAIHKNLLQLIGYCTTSSERILV----YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV 378
+ V + + Y + + Y L++ + D P E + +
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFG-LAKLVDAKLTHVTTQI 437
A + + L Y +HRD+K NIL+D N L DFG KL++ + +
Sbjct: 187 AIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 438 RGTMGHIAPEYLST-----GKSSEKTDVFGYGITLLELVTGQ 474
GT +I+PE L G+ + D + G+ + E++ G+
Sbjct: 238 -GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 29/256 (11%)
Query: 230 CRYQKLRKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVY 289
C + LR+ K+ VA + TQL +E+QL ++F +IG+G FG+V
Sbjct: 57 CSHSALRRDKY-----VAEFLEWAKPFTQL----VKEMQLHREDFEIIKVIGRGAFGEVA 107
Query: 290 KGVLSDNTKVAVKRLQDYYS--PGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILV 347
+ + ++ ++ + + E A RE + V + + Y + +
Sbjct: 108 VVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYL 167
Query: 348 ----YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLK 403
Y L++ + D P + + +A + + L Y +HRD+K
Sbjct: 168 VMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY---------VHRDIK 218
Query: 404 AANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLST-----GKSSEKT 458
N+LLD N L DFG ++ T ++ GT +I+PE L GK +
Sbjct: 219 PDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPEC 278
Query: 459 DVFGYGITLLELVTGQ 474
D + G+ + E++ G+
Sbjct: 279 DWWSLGVCMYEMLYGE 294
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 12/214 (5%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAA--FQREVHLISV 325
L +F +IG+G + KV L ++ A+K ++ E Q E H+
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 326 AIHKNLLQLIGYCTTSSERIL-VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
A + L + C + R+ V ++ + + ++ ++ L + + +
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISL 132
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L YLHE+ II+RDLK N+LLD L D+G+ K + T+ GT +I
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYI 188
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
APE L D + G+ + E++ G+ D
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT-QI 437
+F A G+E+L + K IHRDL A NILL + +CDFGLA+ + +V
Sbjct: 206 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 438 RGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKL 497
R + +APE + + ++DV+ +G+ L E+ + R+L
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPYPGVKIDEEFCRRL 316
Query: 498 LREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
R+ Y + E M Q L C P RP +++V+ L
Sbjct: 317 KEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV 347
E+ LI + H N++ L+G CT ++V
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTT-QI 437
+F A G+E+L + K IHRDL A NILL + +CDFGLA+ + +V
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 438 RGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRXXXXXXXXXXXHIRKL 497
R + +APE + + ++DV+ +G+ L E+ + R+L
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS------LGASPYPGVKIDEEFCRRL 307
Query: 498 LREDRLNDIVDRNLNTYDSKEVETMVQVALLCTQSTPEDRPPMAQVVKML 547
R+ Y + E M Q L C P RP +++V+ L
Sbjct: 308 KEGTRM------RAPDYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYK----GVLSDNT--KVAVKRLQDYYSPGGEAA 315
+ + + D +G+G FG+V + G+ T VAVK L++ + A
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 316 FQREVH-LISVAIHKNLLQLIGYCTTSSERILV 347
E+ LI + H N++ L+G CT ++V
Sbjct: 70 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 102
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 29/256 (11%)
Query: 230 CRYQKLRKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVY 289
C + LR+ K+ VA + TQL +E+QL ++F +IG+G FG+V
Sbjct: 41 CSHSALRRDKY-----VAEFLEWAKPFTQL----VKEMQLHREDFEIIKVIGRGAFGEVA 91
Query: 290 KGVLSDNTKVAVKRLQDYYS--PGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILV 347
+ + ++ ++ + + E A RE + V + + Y + +
Sbjct: 92 VVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYL 151
Query: 348 ----YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLK 403
Y L++ + D P + + +A + + L Y +HRD+K
Sbjct: 152 VMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY---------VHRDIK 202
Query: 404 AANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLST-----GKSSEKT 458
N+LLD N L DFG ++ T ++ GT +I+PE L GK +
Sbjct: 203 PDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPEC 262
Query: 459 DVFGYGITLLELVTGQ 474
D + G+ + E++ G+
Sbjct: 263 DWWSLGVCMYEMLYGE 278
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 12/214 (5%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAA--FQREVHLISV 325
L +F +IG+G + KV L ++ A+K ++ E Q E H+
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 326 AIHKNLLQLIGYCTTSSERIL-VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
A + L + C + R+ V ++ + + ++ ++ L + + +
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISL 121
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L YLHE+ II+RDLK N+LLD L D+G+ K + T+ GT +I
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYI 177
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
APE L D + G+ + E++ G+ D
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 273 NFSESNIIGQGGFGKVY--KGVLSDNTKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHK 329
N+ IG+G F KV + +L+ +VAVK + + + REV ++ V H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
N+++L T LV + V Y + + EK R+ V+ ++Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQY 128
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
H++ I+HRDLKA N+LLD + + DFG + + + G + APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDAFCGAPPYAAPEL 183
Query: 449 LSTGK-SSEKTDVFGYGITLLELVTGQRAID 478
K + DV+ G+ L LV+G D
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 42/237 (17%)
Query: 262 FSCRELQLATDNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREV 320
F + ++L ++ +GGF VY+ + + A+KRL A Q
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC 77
Query: 321 HLISVAIHKNLLQLIGYCTTSS-----------ERILVYPFMQNLSVAYRLRDLKPGEKG 369
+ ++ H N++Q +C+ +S E +L+ + V + + G
Sbjct: 78 FMKKLSGHPNIVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLS 134
Query: 370 LDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA------ 423
D T ++ + T ++++H Q P IIHRDLK N+LL + LCDFG A
Sbjct: 135 CD--TVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHY 191
Query: 424 ----------KLVDAKLTHVTTQIRGTMGHIAPEYL---STGKSSEKTDVFGYGITL 467
LV+ ++T TT + T PE + S EK D++ G L
Sbjct: 192 PDYSWSAQRRALVEEEITRNTTPMYRT-----PEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 30/212 (14%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIH 328
L T FSE + + GK++ AVK + G E++ + E+ ++ H
Sbjct: 30 LGTGAFSEVVLAEEKATGKLF----------AVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGL----DWPTRKRVAFGTAY 384
+N++ L + + LV + + R+ EKG D T R Y
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIV-----EKGFYTEKDASTLIRQVLDAVY 134
Query: 385 GLEYLHEQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
YLH I+HRDLK N+L D+ + ++ DFGL+K+ + K ++T GT
Sbjct: 135 ---YLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTAC-GTP 186
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
G++APE L+ S+ D + G+ L+ G
Sbjct: 187 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT--MG 442
G++YL E +HRDL A N+LL A + DFGL+K + A Q G +
Sbjct: 123 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK 179
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVT-GQR 475
APE ++ K S K+DV+ +G+ + E + GQ+
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
IG G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 95 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 148 ---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 200
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 273 NFSESNIIGQGGFGK-VYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVA-IHKN 330
+F +++G G G VY+G+ DN VAVKR+ P + REV L+ + H N
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRIL----PECFSFADREVQLLRESDEHPN 79
Query: 331 LLQLIGYCTTSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGL 386
+++ Y T +R Y ++ L +D GL+ T + T GL
Sbjct: 80 VIR---YFCTEKDRQFQYIAIELCAATLQEYVEQKDF--AHLGLEPIT---LLQQTTSGL 131
Query: 387 EYLHEQCNPKIIHRDLKAANILLD-----DNFEAVLCDFGLAKLVDAKLTHVTTQ--IRG 439
+LH + I+HRDLK NIL+ +A++ DFGL K + + + + G
Sbjct: 132 AHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPG 188
Query: 440 TMGHIAPEYLSTGKSSEKT---DVFGYGITLLELVT 472
T G IAPE LS T D+F G +++
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 273 NFSESNIIGQGGFGKVY--KGVLS---------DNTKVAVKRLQDYYSPGGEAAFQREVH 321
N+ IG+G F KV + +L+ D T++ LQ + REV
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF---------REVR 65
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRKRVAF 380
++ V H N+++L T LV + V Y + + EK R+ V+
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS- 124
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGT 440
++Y H++ I+HRDLKA N+LLD + + DFG + + + G+
Sbjct: 125 ----AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGS 175
Query: 441 MGHIAPEYLSTGKSSE--KTDVFGYGITLLELVTGQRAID 478
+ APE L GK + + DV+ G+ L LV+G D
Sbjct: 176 PPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 277 SNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLI 335
S ++G+G + KV V L + + AVK ++ F+ L +KN+L+LI
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
+ + LV+ +Q S+ ++ +K + RV A L++LH +
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQK----QKHFNEREASRVVRDVAAALDFLHTK--- 130
Query: 396 KIIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTTQIR--------GTMGHI 444
I HRDLK NIL + + +CDF L + KL + T I G+ ++
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGM--KLNNSCTPITTPELTTPCGSAEYM 188
Query: 445 APEYLS--TGKSS---EKTDVFGYGITLLELVTG 473
APE + T +++ ++ D++ G+ L +++G
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 336 GYCTTS---SERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T E VY M+ NLS ++ LD + + G+++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--------LDHERMSYLLYQMLCGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELVTG 473
+ E D++ G + E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 12/214 (5%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAF---QREVHLISV 325
L +F +IG+G + KV L ++ R+ + Q E H+
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 326 AIHKNLLQLIGYCTTSSERIL-VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
A + L + C + R+ V ++ + + ++ ++ L + + +
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISL 164
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L YLHE+ II+RDLK N+LLD L D+G+ K + T+ GT +I
Sbjct: 165 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYI 220
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
APE L D + G+ + E++ G+ D
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 84 GSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPA 143
G N G I P+I KL L + + ++SG +PDFL + L +L+ + N SG++P
Sbjct: 85 GINNLVGPIPPAIAKLTQL-HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPP 143
Query: 144 TWSQLSNLKHLDLSSNNLTGRIP 166
+ S L NL + N ++G IP
Sbjct: 144 SISSLPNLVGITFDGNRISGAIP 166
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 31/137 (22%)
Query: 80 SLTLGSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLA------ 133
S+T+ N +GKI P+ L +F +L N L G GS + Q ++LA
Sbjct: 178 SMTISRNRLTGKIPPTFANLNL--AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235
Query: 134 -----------------NNKFSGSIPATWSQLSNLKHLDLSSNNLTGRIP----MQLFSV 172
NN+ G++P +QL L L++S NNL G IP +Q F V
Sbjct: 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDV 295
Query: 173 ATFNFTGTHLICGSSLE 189
+ + +CGS L
Sbjct: 296 SA--YANNKCLCGSPLP 310
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 89 SGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQL 148
SG I ++++K L + + N LSGTLP + S+ +L + N+ SG+IP ++
Sbjct: 114 SGAIPDFLSQIKTLVTL-DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSF 172
Query: 149 SNL-KHLDLSSNNLTGRIP 166
S L + +S N LTG+IP
Sbjct: 173 SKLFTSMTISRNRLTGKIP 191
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 92 ISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIPATWSQLSNL 151
I S+ L +L N+L G +P + +T L L + + SG+IP SQ+ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 152 KHLDLSSNNLTGRIPMQLFSVATF 175
LD S N L+G +P + S+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNL 151
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRL--QDYYSPGGEAAFQREVHLIS 324
++ ++ + +G G FGKV G KVAVK L Q S +RE+ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
+ H ++++L +T ++ +V ++ L D ++ +R+
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVS----GGELFDYICKHGRVEEMEARRLFQQILS 122
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV-DAKLTHVTTQIRGTMGH 443
++Y H ++HRDLK N+LLD + A + DFGL+ ++ D + + G+ +
Sbjct: 123 AVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNY 176
Query: 444 IAPEYLSTGK--SSEKTDVFGYGITLLELVTGQRAID 478
APE +S G+ + + D++ G+ L L+ G D
Sbjct: 177 AAPEVIS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYY----SPG-GEAAFQREVHLI 323
L D + +IG+G F V + + + + ++ D SPG +RE +
Sbjct: 21 LFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTA 383
+ H ++++L+ ++ +V+ FM + + + +K + G + A +
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSE----AVASH 134
Query: 384 Y------GLEYLHEQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLA-KLVDAKLTHV 433
Y L Y H+ IIHRD+K N+LL +++ L DFG+A +L ++ L V
Sbjct: 135 YMRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--V 189
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
GT +APE + + DV+G G+ L L++G
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 377 RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTHVTT 435
++A LE+LH + + +IHRD+K +N+L++ + +CDFG++ LVD +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 436 QIRGTMG--HIAPEYLSTGKSSEKTDVFGYGITLLEL 470
+ M I PE G S K+D++ GIT++EL
Sbjct: 171 GCKPYMAPERINPELNQKGYSV-KSDIWSLGITMIEL 206
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTS------SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHE 391
T + ++ LV M L ++ +K D + + + GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-----GADLNNIVKXQKLTD-DHVQFLIYQILRGLKYIH- 142
Query: 392 QCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YLS 450
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L+
Sbjct: 143 --SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLN 196
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
++ D++ G + EL+TG+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 336 GYCTTS---SERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T E VY M+ NLS ++ LD + + G+++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--------LDHERMSYLLYQMLCGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELVTG 473
+ E D++ G + E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 95 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 148 ---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 200
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTK----VAVKRL--QDYYSPGGEAAFQREVH 321
D+F +G+G FG VY L+ K VA+K L G E +RE+
Sbjct: 19 HFTIDDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIE 75
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF- 380
+ + H N+L+L Y L+ L A R K +K + ++
Sbjct: 76 IQAHLHHPNILRLYNYFYDRRRIYLI------LEYAPRGELYKELQKSCTFDEQRTATIM 129
Query: 381 -GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRG 439
A L Y H + K+IHRD+K N+LL E + DFG + V A T G
Sbjct: 130 EELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMC-G 183
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
T+ ++ PE + +EK D++ G+ EL+ G
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 274 FSESNIIGQGGFGKVYKGVLSD--------NTKVAVKRLQDYYSPGGEAAFQREVHLISV 325
F+ES +GQG F K++KGV + T+V +K L + E+ F+ ++S
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE-AASMMSK 68
Query: 326 AIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYG 385
HK+L+ G C E ILV F++ S+ LK + ++ + VA A+
Sbjct: 69 LSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAWA 125
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ---IRGTMG 442
+ +L E +IH ++ A NILL + + KL D ++ ++ +
Sbjct: 126 MHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP 182
Query: 443 HIAPEYLSTGKS-SEKTDVFGYGITLLELVTG 473
+ PE + K+ + TD + +G TL E+ +G
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 95 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 148 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 200
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--------LDHERMSYLLYQMLXGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 269 LATDNFSESNIIGQGGFGKVY--KGVLSDNTKVAVKRLQDYYSPGGEAAFQ---REVHLI 323
L N+ IG+G F KV + +L+ +VAVK + + ++ Q REV ++
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDK--TQLNSSSLQKLFREVRIM 60
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRKRVAFGT 382
V H N+++L T LV + V Y + EK R+ V+
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS--- 117
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
++Y H++ I+HRDLKA N+LLD + + DFG + + + G+
Sbjct: 118 --AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPP 170
Query: 443 HIAPEYLSTGKSSE--KTDVFGYGITLLELVTGQRAID 478
+ APE L GK + + DV+ G+ L LV+G D
Sbjct: 171 YAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILL-DDNFEAVLCDFGLAKLVD----AKLTHVTTQIRG 439
GLEYLH + +I+H D+KA N+LL D A LCDFG A + K I G
Sbjct: 197 GLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
T H+APE + K DV+ +L ++ G
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--------LDHERMSYLLYQMLXGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 378 VAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDD---NFEAV-LCDFGLAKLVDAKLTHV 433
V F +EYLH Q ++HRDLK +NIL D N E++ +CDFG AK + A+ +
Sbjct: 121 VLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
T T +APE L D++ G+ L ++TG
Sbjct: 178 MTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 95 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 148 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 200
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 89 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 141
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 142 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 194
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 96 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 149 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 201
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 338 CTTS------SERILVYPFM----QNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
T + ++ LV M N+ +L D + + + GL+
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD----------DHVQFLIYQILRGLK 150
Query: 388 YLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE 447
Y+H + IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE
Sbjct: 151 YIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV----ATRWYRAPE 203
Query: 448 -YLSTGKSSEKTDVFGYGITLLELVTGQ 474
L+ ++ D++ G + EL+TG+
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--------LDHERMSYLLYQMLXGIKH 134
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 135 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 189
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 97 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 150 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 202
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 280 IGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYC 338
IG+G G V K VAVK++ E F EV ++ H N++ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN-EVVIMRDYHHDNVVDMYSSY 111
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKII 398
E +V F++ ++ + + E+ + V L YLH Q +I
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----ATVCLSVLRALSYLHNQ---GVI 163
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT 458
HRD+K+ +ILL + L DFG V ++ + GT +APE +S +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEV 222
Query: 459 DVFGYGITLLELVTGQ 474
D++ GI ++E++ G+
Sbjct: 223 DIWSLGIMVIEMIDGE 238
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 86 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 139 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 191
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTS------SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHE 391
T + ++ LV M L ++ +K D + + + GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-----GADLNNIVKXQKLTD-DHVQFLIYQILRGLKYIH- 142
Query: 392 QCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YLS 450
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L+
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLN 196
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
++ D++ G + EL+TG+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 92 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 145 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 197
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 179
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 180 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 234
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 87 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 140 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 192
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 102 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 155 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 207
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 96 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 149 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 201
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDL---KPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
T Q++ + L D + + LD + + G+++LH
Sbjct: 91 NVFTPQKS----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 144
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
+ IIHRDLK +NI++ + + DFGLA+ A + + T T + APE +
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 453 KSSEKTDVFGYGITLLELVTG 473
E D++ G + E++ G
Sbjct: 202 GYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDL---KPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
T Q++ + L D + + LD + + G+++LH
Sbjct: 90 NVFTPQKS----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
+ IIHRDLK +NI++ + + DFGLA+ A + + T T + APE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 453 KSSEKTDVFGYGITLLELVTG 473
E D++ G + E++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 102 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 155 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 207
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 92 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 145 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 197
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 92 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 145 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 197
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 102 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 155 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 207
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDL---KPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
T Q++ + L D + + LD + + G+++LH
Sbjct: 90 NVFTPQKS----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
+ IIHRDLK +NI++ + + DFGLA+ A + + T T + APE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 453 KSSEKTDVFGYGITLLELVTG 473
E D++ G + E++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 96 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 149 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 201
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 47/273 (17%)
Query: 218 AFVLLSLGALFACRYQKLRKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSES 277
A L SL ++ KL++L + ED+ V LT+ + E + +
Sbjct: 10 AHSLASLAKTWSSGSAKLQRLGPET------EDNEGVLLTEKLKPVDYEYREEVHWMTHQ 63
Query: 278 NIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G+G FG+V+ R++D + FQ V + + + + + +L+
Sbjct: 64 PRVGRGSFGEVH-------------RMKDK-----QTGFQCAVKKVRLEVFR-VEELVAC 104
Query: 338 CTTSSERIL-----------VYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY-G 385
SS RI+ V FM+ L + +K + G R G A G
Sbjct: 105 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEG 162
Query: 386 LEYLHEQCNPKIIHRDLKAANILL-DDNFEAVLCDFGLAKLVD----AKLTHVTTQIRGT 440
LEYLH + +I+H D+KA N+LL D A LCDFG A + K I GT
Sbjct: 163 LEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGT 219
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
H+APE + K D++ +L ++ G
Sbjct: 220 ETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 87 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 139
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 140 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 192
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--------LDHERMSYLLYQMLCGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 92 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 144
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 145 ---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 197
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 88 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 140
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 141 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 193
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 113 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 166 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 218
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILL-DDNFEAVLCDFGLAKLVD----AKLTHVTTQIRG 439
GLEYLH + +I+H D+KA N+LL D A LCDFG A + K I G
Sbjct: 176 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
T H+APE + K D++ +L ++ G
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 101 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 153
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 154 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 206
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 110 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 163 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 215
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 100 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 152
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 153 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 205
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 86 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 139 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 191
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 96 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 149 ---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 201
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 109 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 162 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 214
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILL-DDNFEAVLCDFGLAKLVD----AKLTHVTTQIRG 439
GLEYLH + +I+H D+KA N+LL D A LCDFG A + K I G
Sbjct: 178 GLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
T H+APE + K DV+ +L ++ G
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 109 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 162 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 214
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILL-DDNFEAVLCDFGLAKLVD----AKLTHVTTQIRG 439
GLEYLH + +I+H D+KA N+LL D A LCDFG A + K I G
Sbjct: 178 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
T H+APE + K D++ +L ++ G
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 110 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++T T + APE L
Sbjct: 163 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIML 215
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDL---KPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
T Q++ + L D + + LD + + G+++LH
Sbjct: 92 NVFTPQKS----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 145
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
+ IIHRDLK +NI++ + + DFGLA+ V + T + APE +
Sbjct: 146 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYYRAPEVILGM 202
Query: 453 KSSEKTDVFGYGITLLELVTG 473
E D++ G + E++ G
Sbjct: 203 GYKENVDIWSVGCIMGEMIKG 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 135
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 136 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 190
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 134
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 135 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 189
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLS-DNTKVAVKRL--QDYYSPGGEAAFQREVHLIS 324
++ ++ + +G G FGKV G KVAVK L Q S +RE+ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 325 VAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAY 384
+ H ++++L +T ++ +V ++ L D ++ +R+
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVS----GGELFDYICKHGRVEEMEARRLFQQILS 122
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV-DAKLTHVTTQIRGTMGH 443
++Y H ++HRDLK N+LLD + A + DFGL+ ++ D + + G+ +
Sbjct: 123 AVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNY 176
Query: 444 IAPEYLSTGK--SSEKTDVFGYGITLLELVTGQRAID 478
APE +S G+ + + D++ G+ L L+ G D
Sbjct: 177 AAPEVIS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 273 NFSESNIIGQGGFGKVY--KGVLSDNTKVAVKRLQDYYSPGGEAAFQ---REVHLISVAI 327
N+ IG+G F KV + +L+ +VAVK + + ++ Q REV + V
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDK--TQLNSSSLQKLFREVRIXKVLN 71
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRKRVAFGTAYGL 386
H N+++L T LV + V Y + + EK R+ V+ +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS-----AV 126
Query: 387 EYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAP 446
+Y H++ I+HRDLKA N+LLD + + DFG + + + G + AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSN--EFTFGNKLDAFCGAPPYAAP 181
Query: 447 EYLSTGK-SSEKTDVFGYGITLLELVTGQRAID 478
E K + DV+ G+ L LV+G D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
GL+Y+H + IIHRDLK +N+ ++++ E + DFGLA+ D ++T T +
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYR 185
Query: 445 APE-YLSTGKSSEKTDVFGYGITLLELVTGQ 474
APE L+ ++ D++ G + EL+TG+
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 179
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 180 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEV 234
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 135
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 136 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 190
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDL---KPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
T Q++ + L D + + LD + + G+++LH
Sbjct: 90 NVFTPQKS----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
+ IIHRDLK +NI++ + + DFGLA+ A + + T T + APE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILGM 200
Query: 453 KSSEKTDVFGYGITLLELVTG 473
E D++ G + E++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 142
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 143 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 197
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 140
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 141 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 195
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 142
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 143 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 197
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y VL N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL ++ LD + + G+++
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKH 141
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + + T T + APE
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 449 LSTGKSSEKTDVFGYGITLLELV 471
+ E D++ G + E+V
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V + VL N VAVK+L + A RE+ L+ HKN++ L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 336 GYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
T T E VY M+ NL + LD + + G+++
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHME--------LDHERMSYLLYQMLCGIKH 139
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEY 448
LH + IIHRDLK +NI++ + + DFGLA+ A + T T + APE
Sbjct: 140 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEV 194
Query: 449 LSTGKSSEKTDVFGYGITLLELVTG 473
+ E D++ G + ELV G
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 274 FSESNIIGQGGFGKVYKGVLSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLL 332
++ +IG G FG V++ L ++ +VA+K+ LQD + RE+ ++ + H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD------KRFKNRELQIMRIVKHPNVV 95
Query: 333 QLIGYCTTSSERI------LVYPFMQNLSVAYRL-RDLKPGEKGLDWPTRKRVAFGTAYG 385
L + ++ ++ LV ++ YR R ++ + K +
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAV-LCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L Y+H I HRD+K N+LLD + L DFG AK++ A +V+ + +
Sbjct: 154 LAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYR 208
Query: 445 APEYL-STGKSSEKTDVFGYGITLLELVTGQ 474
APE + + D++ G + EL+ GQ
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 274 FSESNIIGQGGFGKVYKGVLSD--------NTKVAVKRLQDYYSPGGEAAFQREVHLISV 325
F+ES +GQG F K++KGV + T+V +K L + E+ F+ ++S
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE-AASMMSK 68
Query: 326 AIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYG 385
HK+L+ G C E ILV F++ S+ LK + ++ + VA A
Sbjct: 69 LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAAA 125
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ---IRGTMG 442
+ +L E +IH ++ A NILL + + KL D ++ ++ +
Sbjct: 126 MHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP 182
Query: 443 HIAPEYLSTGKS-SEKTDVFGYGITLLELVTG 473
+ PE + K+ + TD + +G TL E+ +G
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 280 IGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI-HKNLLQLIGY 337
+G+G F K V N AVK + S EA Q+E+ + + H N+++L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII----SKRMEANTQKEITALKLCEGHPNIVKLHEV 74
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKP-GEKGLDWPTRKRVAFGTAYGLEYLHEQCNPK 396
LV + + R++ K E + RK V+ + ++H+
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHDV---G 126
Query: 397 IIHRDLKAANILL---DDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++HRDLK N+L +DN E + DFG A+L + T T+ + APE L+
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNG 185
Query: 454 SSEKTDVFGYGITLLELVTGQ 474
E D++ G+ L +++GQ
Sbjct: 186 YDESCDLWSLGVILYTMLSGQ 206
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDD---NFEAV-LCDFGLAKLVDAKLTHVTTQIRGTM 441
+EYLH Q ++HRDLK +NIL D N E + +CDFG AK + A+ + T T
Sbjct: 134 VEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TA 189
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+APE L E D++ GI L ++ G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQ----REVHLISVAI 327
+N+ I+G+G V + + K ++ D G +A + RE L V I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 328 ------HKNLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRK--RV 378
H N++QL T++ LV+ M+ + Y + EK TRK R
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK----ETRKIMRA 119
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDA--KLTHVTTQ 436
L L+ I+HRDLK NILLDD+ L DFG + +D KL V
Sbjct: 120 LLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC-- 171
Query: 437 IRGTMGHIAPEYLSTGKSS------EKTDVFGYGITLLELVTG 473
GT ++APE + + ++ D++ G+ + L+ G
Sbjct: 172 --GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTS------SERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHE 391
T + ++ LV M L ++ +K D + + + GL+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-----GADLNNIVKSQKLTD-DHVQFLIYQILRGLKYIH- 142
Query: 392 QCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YLS 450
+ IIHRDLK +N+ ++++ E + DFGL + D ++T T + APE L+
Sbjct: 143 --SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV----ATRWYRAPEIMLN 196
Query: 451 TGKSSEKTDVFGYGITLLELVTGQ 474
++ D++ G + EL+TG+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + D+GLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 378 VAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDD---NFEAV-LCDFGLAKLVDAKLTHV 433
V F +EYLH Q ++HRDLK +NIL D N E++ +CDFG AK + A+ +
Sbjct: 121 VLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
T T +APE L D++ G+ L +TG
Sbjct: 178 XTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQ----REVHLISVAI 327
+N+ I+G+G V + + K ++ D G +A + RE L V I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 328 ------HKNLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRK--RV 378
H N++QL T++ LV+ M+ + Y + EK TRK R
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK----ETRKIMRA 132
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDA--KLTHVTTQ 436
L L+ I+HRDLK NILLDD+ L DFG + +D KL V
Sbjct: 133 LLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC-- 184
Query: 437 IRGTMGHIAPEYLSTGKSS------EKTDVFGYGITLLELVTG 473
GT ++APE + + ++ D++ G+ + L+ G
Sbjct: 185 --GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L+YLH + N +++RDLK N++LD + + DFGL K K GT ++
Sbjct: 263 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYL 319
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
APE L D +G G+ + E++ G+
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDD---NFEAV-LCDFGLAKLVDAKLTHVTTQIRGTM 441
+EYLH Q ++HRDLK +NIL D N E + +CDFG AK + A+ + T T
Sbjct: 134 VEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TA 189
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+APE L E D++ GI L ++ G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L+YLH + N +++RDLK N++LD + + DFGL K K GT ++
Sbjct: 260 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYL 316
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
APE L D +G G+ + E++ G+
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
++YLHE I+HRDLK N+L ++N + ++ DFGL+K+ + + + GT
Sbjct: 118 AVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTP 171
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
G++APE L+ S+ D + G+ L+ G
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L+YLH + N +++RDLK N++LD + + DFGL K K GT ++
Sbjct: 122 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 178
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
APE L D +G G+ + E++ G+
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L+YLH + N +++RDLK N++LD + + DFGL K K GT ++
Sbjct: 120 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 176
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
APE L D +G G+ + E++ G+
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
L+YLH + N +++RDLK N++LD + + DFGL K K GT ++
Sbjct: 121 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 177
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
APE L D +G G+ + E++ G+
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++ T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQ----REVHLISVAI 327
+N+ I+G+G V + + K ++ D G +A + RE L V I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 328 ------HKNLLQLIGYCTTSSERILVYPFMQNLSV-AYRLRDLKPGEKGLDWPTRK--RV 378
H N++QL T++ LV+ M+ + Y + EK TRK R
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK----ETRKIMRA 132
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDA--KLTHVTTQ 436
L L+ I+HRDLK NILLDD+ L DFG + +D KL V
Sbjct: 133 LLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC-- 184
Query: 437 IRGTMGHIAPEYLSTGKSS------EKTDVFGYGITLLELVTG 473
GT ++APE + + ++ D++ G+ + L+ G
Sbjct: 185 --GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++ T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYS---PGGEAAFQREVH 321
R+L++ +++ +IG+G FG+V KV +L + A F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+++ A ++QL +V +M + + + EK + T + V
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL-- 179
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGT 440
L+ +H IHRD+K N+LLD + L DFG K+ + T + GT
Sbjct: 180 ---ALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT 232
Query: 441 MGHIAPEYLST----GKSSEKTDVFGYGITLLELVTGQ 474
+I+PE L + G + D + G+ L E++ G
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYS---PGGEAAFQREVH 321
R+L++ +++ +IG+G FG+V KV +L + A F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+++ A ++QL +V +M + + + EK + T + V
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL-- 184
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGT 440
L+ +H IHRD+K N+LLD + L DFG K+ + T + GT
Sbjct: 185 ---ALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT 237
Query: 441 MGHIAPEYLST----GKSSEKTDVFGYGITLLELVTGQ 474
+I+PE L + G + D + G+ L E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGTM 441
A GL +L + II+RDLK N++LD + DFG+ K + VTT+ GT
Sbjct: 452 AIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTP 506
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
+IAPE ++ + D + +G+ L E++ GQ +
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 86 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++ T + APE L
Sbjct: 139 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIML 191
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYS---PGGEAAFQREVH 321
R+L++ +++ +IG+G FG+V KV +L + A F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG 381
+++ A ++QL +V +M + + + EK + T + V
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL-- 184
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLA-KLVDAKLTHVTTQIRGT 440
L+ +H IHRD+K N+LLD + L DFG K+ + T + GT
Sbjct: 185 ---ALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT 237
Query: 441 MGHIAPEYLST----GKSSEKTDVFGYGITLLELVTGQ 474
+I+PE L + G + D + G+ L E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 113 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++ T + APE L
Sbjct: 166 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV----ATRWYRAPEIML 218
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGE-AAFQREVHLISVAIHKNLLQLIGYC 338
IG GGF KV ++ ++ D + G + + E+ + H+++ QL
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 339 TTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDW--------PTRKRVAF-GTAYGLEYL 389
T+++ +V + PG + D+ RV F + Y+
Sbjct: 78 ETANKIFMVLEYC-------------PGGELFDYIISQDRLSEEETRVVFRQIVSAVAYV 124
Query: 390 HEQCNPKIIHRDLKAANILLDDNFEAVLCDFGL-AKLVDAKLTHVTTQIRGTMGHIAPEY 448
H Q HRDLK N+L D+ + L DFGL AK K H+ T G++ + APE
Sbjct: 125 HSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPE- 179
Query: 449 LSTGKS--SEKTDVFGYGITLLELVTG 473
L GKS + DV+ GI L L+ G
Sbjct: 180 LIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 110 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ D ++ T + APE L
Sbjct: 163 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV----ATRWYRAPEIML 215
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQ-IRGTM 441
A GL +L + II+RDLK N++LD + DFG+ K + VTT+ GT
Sbjct: 131 AIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTP 185
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAID 478
+IAPE ++ + D + +G+ L E++ GQ +
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRD---LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
T Q++ + L D + + LD + + G+++LH
Sbjct: 84 NVFTPQKS----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 137
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
+ IIHRDLK +NI++ + + DFGLA+ A + + T T + APE +
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 453 KSSEKTDVFGYGITLLELV 471
E D++ G + E+V
Sbjct: 195 GYKENVDLWSVGCIMGEMV 213
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 268 QLATDNFSESNIIGQGGFGKVY--KGVLSDNT-KV----AVKRLQDYYSPGGEAAFQREV 320
++ + F ++G+GG+GKV+ + V NT K+ +K+ + A + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 321 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF 380
+++ H ++ LI T + L+ ++ + +L + G D
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE--REGIFMEDTACFYLAEI 130
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDAKLTHVTTQIR 438
A G +LH++ II+RDLK NI+L+ L DFGL K + D +TH
Sbjct: 131 SMALG--HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC--- 182
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
GT+ ++APE L + D + G + +++TG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRD---LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
T Q++ + L D + + LD + + G+++LH
Sbjct: 95 NVFTPQKS----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 148
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
+ IIHRDLK +NI++ + + DFGLA+ A + + T T + APE +
Sbjct: 149 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 205
Query: 453 KSSEKTDVFGYGITLLELV 471
E D++ G + E+V
Sbjct: 206 GYKENVDLWSVGCIMGEMV 224
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 268 QLATDNFSESNIIGQGGFGKVY--KGVLSDNT-KV----AVKRLQDYYSPGGEAAFQREV 320
++ + F ++G+GG+GKV+ + V NT K+ +K+ + A + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 321 HLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF 380
+++ H ++ LI T + L+ ++ + +L + G D
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE--REGIFMEDTACFYLAEI 130
Query: 381 GTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDAKLTHVTTQIR 438
A G +LH++ II+RDLK NI+L+ L DFGL K + D +TH
Sbjct: 131 SMALG--HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC--- 182
Query: 439 GTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
GT+ ++APE L + D + G + +++TG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
IG+G G V + + ++ D EV ++ H N++++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 340 TSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIH 399
E ++ F+Q ++ + ++ E+ + V L YLH Q +IH
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQI-----ATVCEAVLQALAYLHAQ---GVIH 164
Query: 400 RDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTD 459
RD+K+ +ILL + L DFG + +K + GT +APE +S + + D
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQI-SKDVPKRKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 460 VFGYGITLLELVTGQ 474
++ GI ++E+V G+
Sbjct: 224 IWSLGIMVIEMVDGE 238
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSD-NTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHK 329
DN+ ++IG+G +G VY + N VA+K++ + + RE+ +++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 330 NLLQLIGYCTTSSERILVYPFMQNLSVAYRL--RDLKPGEKGLDWPTR---KRVAFGTAY 384
+++L + E +L + L + + DLK K + T K + +
Sbjct: 88 YIIRL--HDLIIPEDLLKF---DELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLL 142
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDA-KLTHVTTQIRGTMGH 443
G +++HE IIHRDLK AN LL+ + +CDFGLA+ +++ K H+ + +
Sbjct: 143 GEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 444 IAP 446
P
Sbjct: 200 EEP 202
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 399 HRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEK 457
HRD+K NIL+ + A L DFG+A D KLT + + GT+ + APE S ++ +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 458 TDVFGYGITLLELVTG 473
D++ L E +TG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + FGLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 97 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ ++T T + APE L
Sbjct: 150 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYRAPEIML 202
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 97 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ ++T T + APE L
Sbjct: 150 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYRAPEIML 202
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 97 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 149
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DFGLA+ ++T T + APE L
Sbjct: 150 ---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYRAPEIML 202
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 26/211 (12%)
Query: 274 FSESNIIGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHK 329
+ + IG G G V + VL N VAVK+L + A RE+ L+ HK
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGIN--VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 330 NLLQLIGYCT---TSSERILVYPFMQ----NLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
N++ L+ T T E VY M+ NL + LD + +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME--------LDHERMSYLLYQM 135
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
G+++LH + IIHRDLK +NI++ + + DFGLA+ A + T T
Sbjct: 136 LCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRY 190
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+ APE + + D++ G + ELV G
Sbjct: 191 YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D+ + DFG AK V + T + GT ++A
Sbjct: 141 FEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 193
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + D GLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + DF LA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + D GLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL---CDFGLAKLVDAKLTHVTTQIRGTM 441
G+ YLH+ I+HRDLK N+LL+ + L DFGL+ + + + + GT
Sbjct: 148 GVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ--KKMKERLGTA 202
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+IAPE L K EK DV+ G+ L L+ G
Sbjct: 203 YYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 377 RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK-LVDAKLTHVTT 435
++A LE+LH + + +IHRD+K +N+L++ + CDFG++ LVD +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 436 QIRGTMGHIAPEY----LSTGKSSEKTDVFGYGITLLEL 470
G + APE L+ S K+D++ GIT +EL
Sbjct: 198 ---GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+++D + DFGLAK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+++D + DFGLAK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 280 IGQGGFGKVYKGVLSD-NTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL---- 334
+G GG G V+ V +D + +VA+K++ P RE+ +I H N++++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIV-LTDPQSVKHALREIKIIRRLDHDNIVKVFEIL 77
Query: 335 ----------IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRV-AFGTA 383
+G T + +V +M+ +A L E+G R+ +
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL------EQGPLLEEHARLFMYQLL 130
Query: 384 YGLEYLHEQCNPKIIHRDLKAANILLD-DNFEAVLCDFGLAKLVDAKLTHVTTQIRG--T 440
GL+Y+H + ++HRDLK AN+ ++ ++ + DFGLA+++D +H G T
Sbjct: 131 RGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 441 MGHIAPE-YLSTGKSSEKTDVFGYGITLLELVTGQ 474
+ +P LS ++ D++ G E++TG+
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRD---LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
T Q++ + L D + + LD + + G+++LH
Sbjct: 90 NVFTPQKS----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
+ IIHRDLK +NI++ + + DFGLA+ + T + APE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYRAPEVILGM 200
Query: 453 KSSEKTDVFGYGITLLELV 471
E D++ G + E+V
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV---DAKLTHVTTQIRGTM 441
GL+Y+H + ++IHRDLK +N+L+++N E + DFG+A+ + A+ + T+ T
Sbjct: 171 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 442 GHIAPE-YLSTGKSSEKTDVFGYGITLLELVT 472
+ APE LS + ++ D++ G E++
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 280 IGQGGFGKVYKGVLSDN-TKVAVKRL-QDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
+G G +G V + +VAVK+L + + S RE+ L+ H+N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 338 CTTSSERILVYPFMQNLSVAYRLRDLKPGE-------KGLDWPTRKRVAFGTAYGLEYLH 390
T + ++ + Y + L + + L + + + GL+Y+H
Sbjct: 90 FTPARS-------LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPE-YL 449
+ IIHRDLK +N+ ++++ E + D GLA+ D ++T T + APE L
Sbjct: 143 ---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYV----ATRWYRAPEIML 195
Query: 450 STGKSSEKTDVFGYGITLLELVTGQ 474
+ ++ D++ G + EL+TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
LEYLH + +++RD+K N++LD + + DFGL K + + T GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYL 172
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
APE L D +G G+ + E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
LEYLH + +++RD+K N++LD + + DFGL K + + T GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYL 172
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
APE L D +G G+ + E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 199
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHI 444
LEYLH + +++RD+K N++LD + + DFGL K + + T GT ++
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYL 175
Query: 445 APEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
APE L D +G G+ + E++ G+
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 199
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 149 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 201
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 227
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 227
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 140 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLA 192
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLV---DAKLTHVTTQIRGTM 441
GL+Y+H + ++IHRDLK +N+L+++N E + DFG+A+ + A+ + T+ T
Sbjct: 170 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 442 GHIAPE-YLSTGKSSEKTDVFGYGITLLELVT 472
+ APE LS + ++ D++ G E++
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDN--FEAVLCDFGLA----KLVDAKLTHVTTQIR 438
L YLH Q I HRD+K N L N FE L DFGL+ KL + + +TT+
Sbjct: 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA- 235
Query: 439 GTMGHIAPEYLSTGKSS--EKTDVFGYGITLLELVTG 473
GT +APE L+T S K D + G+ L L+ G
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 374 TRKRVAFGTAY---GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDA 428
T +R F A LEYLH + +++RD+K N++LD + + DFGL K + D
Sbjct: 108 TEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 164
Query: 429 KLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
GT ++APE L D +G G+ + E++ G+
Sbjct: 165 A---TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 279 IIGQGGFGKVYKG-VLSDNTKVAVK-----RLQDYYSPGGEAAFQREVHLI----SVAIH 328
++G+GGFG V+ G L+D +VA+K R+ + EV L+ + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG-TAYGLE 387
+++L+ + T +LV ++ A L D EKG R FG ++
Sbjct: 98 PGVIRLLDWFETQEGFMLV---LERPLPAQDLFDYI-TEKGPLGEGPSRCFFGQVVAAIQ 153
Query: 388 YLHEQCNPKIIHRDLKAANILLD-DNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAP 446
+ H + ++HRD+K NIL+D A L DFG L+ + T GT + P
Sbjct: 154 HCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE---PYTDFDGTRVYSPP 207
Query: 447 EYLSTGK-SSEKTDVFGYGITLLELVTGQRAIDFSR 481
E++S + + V+ GI L ++V G I F R
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGD--IPFER 241
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDAKLTHVTTQIRGTMG 442
LEYLH + +++RD+K N++LD + + DFGL K + D GT
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKXFCGTPE 170
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++APE L D +G G+ + E++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 270 ATDNFSESNIIGQGGFGKVYKGVLSDNTK-VAVKRLQDYYSPGGEAA-FQREVHLISVAI 327
DN+ ++IG+G +G VY + K VA+K++ + + RE+ +++
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRL--RDLKPGEKGLDWPTR---KRVAFGT 382
+++L Y + +L + L + + DLK K + T K + +
Sbjct: 84 SDYIIRL--YDLIIPDDLLKF---DELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNL 138
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAK 429
G ++HE IIHRDLK AN LL+ + +CDFGLA+ ++++
Sbjct: 139 LLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDAKLTHVTTQIRGTMG 442
LEYLH + +++RD+K N++LD + + DFGL K + D GT
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKXFCGTPE 170
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++APE L D +G G+ + E++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 280 IGQGGFGKV---YKGVLSDNTKVAVKRLQDYYSPGGEAA-FQREVHLISVAIHKNLLQLI 335
IG G G V Y +L N VA+K+L + A RE+ L+ HKN++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRD---LKPGEKGLDWPTRKRVAFGTAYGLEYLHEQ 392
T Q++ + L D + + LD + + G+++LH
Sbjct: 90 NVFTPQKS----LEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 393 CNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
+ IIHRDLK +NI++ + + DFGLA+ + T + APE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYRAPEVILGM 200
Query: 453 KSSEKTDVFGYGITLLELV 471
E D++ G + E+V
Sbjct: 201 GYKENVDLWSVGCIMGEMV 219
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 98/247 (39%), Gaps = 38/247 (15%)
Query: 242 VFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNT--KV 299
VFFD+ DD V LR D + S +G G G+V K T KV
Sbjct: 131 VFFDLTV-DDQSVYPKALR-----------DEYIMSKTLGSGACGEV-KLAFERKTCKKV 177
Query: 300 AVKRLQDYYSPGGEAA-------FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQ 352
A++ + G A + E+ ++ H ++++ + Y +
Sbjct: 178 AIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-----YYIVL 232
Query: 353 NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDN 412
L L D G K L T K + ++YLHE IIHRDLK N+LL
Sbjct: 233 ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQ 289
Query: 413 FEAVL---CDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL---STGKSSEKTDVFGYGIT 466
E L DFG +K++ T + + GT ++APE L T + D + G+
Sbjct: 290 EEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
Query: 467 LLELVTG 473
L ++G
Sbjct: 348 LFICLSG 354
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAK--LVDAKLTHVTTQIRGTMG 442
LEYLH + +++RD+K N++LD + + DFGL K + D GT
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TMKXFCGTPE 170
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTGQ 474
++APE L D +G G+ + E++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+++D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+++D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+++D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+++D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 98/247 (39%), Gaps = 38/247 (15%)
Query: 242 VFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSESNIIGQGGFGKVYKGVLSDNT--KV 299
VFFD+ DD V LR D + S +G G G+V K T KV
Sbjct: 117 VFFDLTV-DDQSVYPKALR-----------DEYIMSKTLGSGACGEV-KLAFERKTCKKV 163
Query: 300 AVKRLQDYYSPGGEAA-------FQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQ 352
A++ + G A + E+ ++ H ++++ + Y +
Sbjct: 164 AIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-----YYIVL 218
Query: 353 NLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDN 412
L L D G K L T K + ++YLHE IIHRDLK N+LL
Sbjct: 219 ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQ 275
Query: 413 FEAVL---CDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL---STGKSSEKTDVFGYGIT 466
E L DFG +K++ T + + GT ++APE L T + D + G+
Sbjct: 276 EEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
Query: 467 LLELVTG 473
L ++G
Sbjct: 334 LFICLSG 340
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+++D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+++D + DFG AK V + T + GT ++A
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+++D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+++D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G G FG V++ V +V V + + P + + E+ +++ H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 340 TSSERILVYPFMQNLSVAYRL--RDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKI 397
E +L+ F+ + R+ D K E + R+ GL+++HE I
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ-----ACEGLKHMHEHS---I 170
Query: 398 IHRDLKAANILLDDNFEAV--LCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLSTGKS 454
+H D+K NI+ + + + DFGLA KL ++ VTT T APE +
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPV 227
Query: 455 SEKTDVFGYGITLLELVTG 473
TD++ G+ L++G
Sbjct: 228 GFYTDMWAIGVLGYVLLSG 246
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V T + GT ++A
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----ATWTLCGTPEYLA 227
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCT 339
+G+G +G VYK D L+ G + RE+ L+ H N++ L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 340 TSSER--ILVYPFMQN--LSVAYRLRDLKPGEKGLDWP--TRKRVAFGTAYGLEYLHEQC 393
+ ++R L++ + ++ + R K +K + P K + + G+ YLH
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 394 NPKIIHRDLKAANILL----DDNFEAVLCDFGLAKLVDAKLTHVT--TQIRGTMGHIAPE 447
++HRDLK ANIL+ + + D G A+L ++ L + + T + APE
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 448 YLSTGKSSEKT-DVFGYGITLLELVTGQ 474
L + K D++ G EL+T +
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 26/217 (11%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNT--KVAVKRLQDYYSPGGEAA-------FQREVHL 322
D + S +G G G+V K T KVA+K + G A + E+ +
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
+ H ++++ + Y + L L D G K L T K +
Sbjct: 69 LKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL---CDFGLAKLVDAKLTHVTTQIRG 439
++YLHE IIHRDLK N+LL E L DFG +K++ T + + G
Sbjct: 124 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCG 178
Query: 440 TMGHIAPEYL---STGKSSEKTDVFGYGITLLELVTG 473
T ++APE L T + D + G+ L ++G
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 26/217 (11%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNT--KVAVKRLQDYYSPGGEAA-------FQREVHL 322
D + S +G G G+V K T KVA+K + G A + E+ +
Sbjct: 9 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 67
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
+ H ++++ + Y + L L D G K L T K +
Sbjct: 68 LKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL---CDFGLAKLVDAKLTHVTTQIRG 439
++YLHE IIHRDLK N+LL E L DFG +K++ T + + G
Sbjct: 123 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCG 177
Query: 440 TMGHIAPEYL---STGKSSEKTDVFGYGITLLELVTG 473
T ++APE L T + D + G+ L ++G
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 26/217 (11%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNT--KVAVKRLQDYYSPGGEAA-------FQREVHL 322
D + S +G G G+V K T KVA+K + G A + E+ +
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
+ H ++++ + Y + L L D G K L T K +
Sbjct: 69 LKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL---CDFGLAKLVDAKLTHVTTQIRG 439
++YLHE IIHRDLK N+LL E L DFG +K++ T + + G
Sbjct: 124 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCG 178
Query: 440 TMGHIAPEYL---STGKSSEKTDVFGYGITLLELVTG 473
T ++APE L T + D + G+ L ++G
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT +A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
PE + + ++ D + G+ + E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 26/217 (11%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNT--KVAVKRLQDYYSPGGEAA-------FQREVHL 322
D + S +G G G+V K T KVA+K + G A + E+ +
Sbjct: 10 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
+ H ++++ + Y + L L D G K L T K +
Sbjct: 69 LKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL---CDFGLAKLVDAKLTHVTTQIRG 439
++YLHE IIHRDLK N+LL E L DFG +K++ T + + G
Sbjct: 124 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCG 178
Query: 440 TMGHIAPEYL---STGKSSEKTDVFGYGITLLELVTG 473
T ++APE L T + D + G+ L ++G
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 26/217 (11%)
Query: 272 DNFSESNIIGQGGFGKVYKGVLSDNT--KVAVKRLQDYYSPGGEAA-------FQREVHL 322
D + S +G G G+V K T KVA+K + G A + E+ +
Sbjct: 16 DEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 74
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
+ H ++++ + Y + L L D G K L T K +
Sbjct: 75 LKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL---CDFGLAKLVDAKLTHVTTQIRG 439
++YLHE IIHRDLK N+LL E L DFG +K++ T + + G
Sbjct: 130 LLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCG 184
Query: 440 TMGHIAPEYL---STGKSSEKTDVFGYGITLLELVTG 473
T ++APE L T + D + G+ L ++G
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDN---FEAVLCDFGLAKLV--DAKLTHVTTQIRG 439
G+ YLH+ I+HRD+K NILL++ + DFGL+ D KL G
Sbjct: 158 GICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL----G 210
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
T +IAPE L K +EK DV+ G+ + L+ G
Sbjct: 211 TAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIA 445
EYLH + +I+RDLK N+L+D + DFG AK V + T + GT ++A
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 446 PEYLSTGKSSEKTDVFGYGITLLELVTG 473
P + + ++ D + G+ + E+ G
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYY----SPG-GEAAFQREVHLI 323
L D + +IG+G F V + + + + ++ D SPG +RE +
Sbjct: 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTA 383
+ H ++++L+ ++ +V+ FM + + + +K + G + A +
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSE----AVASH 134
Query: 384 Y------GLEYLHEQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLA-KLVDAKLTHV 433
Y L Y H+ IIHRD+K +LL +++ L FG+A +L ++ L V
Sbjct: 135 YMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--V 189
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
GT +APE + + DV+G G+ L L++G
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 269 LATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYY----SPG-GEAAFQREVHLI 323
L D + +IG+G F V + + + + ++ D SPG +RE +
Sbjct: 23 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 82
Query: 324 SVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTA 383
+ H ++++L+ ++ +V+ FM + + + +K + G + A +
Sbjct: 83 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSE----AVASH 136
Query: 384 Y------GLEYLHEQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLA-KLVDAKLTHV 433
Y L Y H+ IIHRD+K +LL +++ L FG+A +L ++ L V
Sbjct: 137 YMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--V 191
Query: 434 TTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
GT +APE + + DV+G G+ L L++G
Sbjct: 192 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 275 SESNIIGQGGFGKVYK-GVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQ 333
S++ I+G G FG+V+K + K+A K ++ E + E+ +++ H NL+Q
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV-KNEISVMNQLDHANLIQ 150
Query: 334 LIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAF--GTAYGLEYLHE 391
L + ++ +LV ++ + R+ D LD + F G+ ++H+
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD-----TILFMKQICEGIRHMHQ 205
Query: 392 QCNPKIIHRDLKAANILL--DDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL 449
I+H DLK NIL D + + DFGLA+ + GT +APE +
Sbjct: 206 MY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN--FGTPEFLAPEVV 260
Query: 450 STGKSSEKTDVFGYGITLLELVTG 473
+ S TD++ G+ L++G
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 40/162 (24%)
Query: 335 IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRK------------RVAFGT 382
+G SS ++ +Y MQ R +LK DW R+ +
Sbjct: 124 VGQLQPSSPKVYLYIQMQ----LCRKENLK------DWMNRRCSLEDREHGVCLHIFIQI 173
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVD-------------AK 429
A +E+LH + ++HRDLK +NI + + DFGL +D A
Sbjct: 174 AEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230
Query: 430 LTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
TH Q+ GT +++PE + S K D+F G+ L EL+
Sbjct: 231 ATH-XGQV-GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILL---DDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
+ YLHE I+HRDLK N+L + + DFGL+K+V+ ++ T + GT
Sbjct: 160 AVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTP 214
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
G+ APE L + D++ GI L+ G
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 382 TAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIRGTM 441
T L +LH Q ++H D+K ANI L L DFGL LV+ G
Sbjct: 166 TLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDP 220
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELV 471
++APE L G DVF G+T+LE+
Sbjct: 221 RYMAPELLQ-GSYGTAADVFSLGLTILEVA 249
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNF---EAVLCDFGLAKLVDAKLTHVTT--QIRG 439
G+ YLH+ I+H DLK NILL + + + DFG+++ K+ H +I G
Sbjct: 143 GVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELREIMG 195
Query: 440 TMGHIAPEYLSTGKSSEKTDVFGYGITLLELVT 472
T ++APE L+ + TD++ GI L+T
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 30/124 (24%)
Query: 376 KRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVD-------- 427
K + + G++Y+H + I+HRDLK AN L++ + +CDFGLA+ VD
Sbjct: 159 KTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ 215
Query: 428 ------------AKLTHVTTQIRGTMGHI------APEYLSTGKS-SEKTDVFGYGITLL 468
H R GH+ APE + ++ +E DV+ G
Sbjct: 216 LPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFA 275
Query: 469 ELVT 472
EL+
Sbjct: 276 ELLN 279
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 23/213 (10%)
Query: 271 TDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRL--QDYYSPGGEAAFQREVHLISVAIH 328
TD++ +G+G F V + V T+ ++ S +RE + + H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 329 KNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYG--- 385
N+++L + LV+ + GE D R+ + A
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTG------------GELFEDIVAREYYSEADASHCIH 137
Query: 386 --LEYLHEQCNPKIIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTTQIRGT 440
LE ++ I+HRDLK N+LL + L DFGLA V + GT
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE-QQAWFGFAGT 196
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
G+++PE L + D++ G+ L L+ G
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 397 IIHRDLKAANILLDDNFEAV---LCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
I+HR+LK N+LL + L DFGLA ++ D++ H GT G+++PE L
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKD 182
Query: 453 KSSEKTDVFGYGITLLELVTG 473
S+ D++ G+ L L+ G
Sbjct: 183 PYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 397 IIHRDLKAANILLDDNFEAV---LCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
I+HR+LK N+LL + L DFGLA ++ D++ H GT G+++PE L
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKD 181
Query: 453 KSSEKTDVFGYGITLLELVTG 473
S+ D++ G+ L L+ G
Sbjct: 182 PYSKPVDIWACGVILYILLVG 202
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 397 IIHRDLKAANILLDDNFEAV---LCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
I+HR+LK N+LL + L DFGLA ++ D++ H GT G+++PE L
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKD 205
Query: 453 KSSEKTDVFGYGITLLELVTG 473
S+ D++ G+ L L+ G
Sbjct: 206 PYSKPVDIWACGVILYILLVG 226
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 397 IIHRDLKAANILLDDNFEAV---LCDFGLA-KLVDAKLTHVTTQIRGTMGHIAPEYLSTG 452
I+HR+LK N+LL + L DFGLA ++ D++ H GT G+++PE L
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKD 182
Query: 453 KSSEKTDVFGYGITLLELVTG 473
S+ D++ G+ L L+ G
Sbjct: 183 PYSKPVDIWACGVILYILLVG 203
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL--CDFGLAKLVDAKLTHVTTQIRGTMG 442
G+ Y H +I HRDLK N LLD + L CDFG +K + L GT
Sbjct: 128 GVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTVGTPA 182
Query: 443 HIAPEYLSTGKSSEK-TDVFGYGITLLELVTG 473
+IAPE L + K DV+ G+TL ++ G
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 23/211 (10%)
Query: 268 QLATDNFSESNIIGQ--GGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISV 325
+L + F + +++ + G +V K + D ++V +++++ E+ ++
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE------------AEIEVLKS 76
Query: 326 AIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYG 385
H N++++ +V + + R+ + K L +
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDD---NFEAVLCDFGLAKLVDAKLTHVTTQIRGTMG 442
L Y H Q ++H+DLK NIL D + + DFGLA+L K +T GT
Sbjct: 137 LAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF--KSDEHSTNAAGTAL 191
Query: 443 HIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
++APE + K D++ G+ + L+TG
Sbjct: 192 YMAPEVFKRDVTF-KCDIWSAGVVMYFLLTG 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL---CDFGLAKLVDAKLTHVTTQIRGTM 441
G YLH+ I+HRDLK N+LL+ L DFGL+ ++ + GT
Sbjct: 133 GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKMKERLGTA 187
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+IAPE L K EK DV+ G+ L L+ G
Sbjct: 188 YYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 397 IIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++HRDLK N+LL + L DFGLA V+ + GT G+++PE L
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE-QQAWFGFAGTPGYLSPEVLRKDP 200
Query: 454 SSEKTDVFGYGITLLELVTG 473
+ D++ G+ L L+ G
Sbjct: 201 YGKPVDLWACGVILYILLVG 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL---CDFGLAKLVDAKLTHVTTQIRGTM 441
G YLH+ I+HRDLK N+LL+ L DFGL+ ++ + GT
Sbjct: 116 GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKMKERLGTA 170
Query: 442 GHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+IAPE L K EK DV+ G+ L L+ G
Sbjct: 171 YYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL--CDFGLAKLVDAKLTHVTTQIRGTMG 442
G+ Y H ++ HRDLK N LLD + L CDFG +K + L GT
Sbjct: 127 GVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTVGTPA 181
Query: 443 HIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
+IAPE L + K DV+ G+TL ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 28/213 (13%)
Query: 272 DNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
D++ +G G FG V++ + A K + + E ++E+ +SV H
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV-RKEIQTMSVLRHPT 109
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
L+ L +E +++Y FM + ++ D + +EY+
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD-------------EHNKMSEDEAVEYMR 156
Query: 391 EQCN-------PKIIHRDLKAANILL--DDNFEAVLCDFGLAKLVDAKLT-HVTTQIRGT 440
+ C +H DLK NI+ + E L DFGL +D K + VTT GT
Sbjct: 157 QVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GT 213
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
APE TD++ G+ L++G
Sbjct: 214 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 47/219 (21%)
Query: 279 IIGQGGFGKV-YKGVLSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 336
I+G G G V ++G VAVKR L D+ + A L H N+++
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRY-- 74
Query: 337 YCTTSSERILVYPF-MQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG-------TAYGLEY 388
YC+ +++R L + NL+ L+DL + D + + + A G+ +
Sbjct: 75 YCSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 389 LHEQCNPKIIHRDLKAANILLD-------------DNFEAVLCDFGLAKLVDAKLTHVTT 435
LH KIIHRDLK NIL+ +N ++ DFGL K +D+ + T
Sbjct: 131 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 436 QIR---GTMGHIAPEYLSTGKS-------SEKTDVFGYG 464
+ GT G APE L + + D+F G
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL--CDFGLAKLVDAKLTHVTTQIRGTMG 442
G+ Y H ++ HRDLK N LLD + L CDFG +K + L GT
Sbjct: 126 GVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK--SSVLHSQPKSTVGTPA 180
Query: 443 HIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
+IAPE L + K DV+ G+TL ++ G
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 28/213 (13%)
Query: 272 DNFSESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKN 330
D++ +G G FG V++ + A K + + E ++E+ +SV H
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV-RKEIQTMSVLRHPT 215
Query: 331 LLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLH 390
L+ L +E +++Y FM + ++ D + +EY+
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD-------------EHNKMSEDEAVEYMR 262
Query: 391 EQC-------NPKIIHRDLKAANILL--DDNFEAVLCDFGLAKLVDAKLT-HVTTQIRGT 440
+ C +H DLK NI+ + E L DFGL +D K + VTT GT
Sbjct: 263 QVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GT 319
Query: 441 MGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
APE TD++ G+ L++G
Sbjct: 320 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 19/211 (9%)
Query: 271 TDNFSESNIIGQGGFGKVYKGVLSDNTKVAV-------KRLQDYYSPGGE-AAFQREVHL 322
+ +S + +G G FG V+ V + K V K L+D + + E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 323 ISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGT 382
+S H N+++++ LV M+ L LD P +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLV---MEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 383 AYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVD-AKLTHVTTQIRGTM 441
+ YL + IIHRD+K NI++ ++F L DFG A ++ KL + GT+
Sbjct: 140 VSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTI 193
Query: 442 GHIAPEYL-STGKSSEKTDVFGYGITLLELV 471
+ APE L + +++ G+TL LV
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 18/210 (8%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+L + F+ Q G GK Y + +RL +REV+++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKF-----IKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
H N++ L ++ +L+ L L D ++ L + G+
Sbjct: 74 HPNIITLHDIFENKTDVVLIL----ELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 129
Query: 388 YLHEQCNPKIIHRDLKAANILLDD----NFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
YLH + +I H DLK NI+L D N L DFG+A ++A + I GT
Sbjct: 130 YLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA--GNEFKNIFGTPEF 184
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+APE ++ + D++ G+ L++G
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 397 IIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
I+HRDLK N+LL + L DFGLA V GT G+++PE L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGYLSPEVLRKDP 182
Query: 454 SSEKTDVFGYGITLLELVTG 473
+ D++ G+ L L+ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 397 IIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
I+HRDLK N+LL + L DFGLA V GT G+++PE L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGYLSPEVLRKDP 182
Query: 454 SSEKTDVFGYGITLLELVTG 473
+ D++ G+ L L+ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 397 IIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++HR+LK N+LL + L DFGLA V+ + GT G+++PE L
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE-QQAWFGFAGTPGYLSPEVLRKDP 189
Query: 454 SSEKTDVFGYGITLLELVTG 473
+ D++ G+ L L+ G
Sbjct: 190 YGKPVDLWACGVILYILLVG 209
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 38/201 (18%)
Query: 217 GAFVLLSLGALFACRYQKLRKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSE 276
G + L+ +G LF RY +RKL F V D Q ++F ++ + ++++E
Sbjct: 8 GGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWD-----IQGKKFVAMKVVKSAEHYTE 62
Query: 277 SNIIGQGGFGKVYKGVLSD-NTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLI 335
+ + V +D N ++ V+ L D+ G + ++ + +LL+ I
Sbjct: 63 TALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGT---HICMVFEVLGHHLLKWI 119
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
+K +GL P K++ GL+YLH +C
Sbjct: 120 ---------------------------IKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC-- 150
Query: 396 KIIHRDLKAANILLDDNFEAV 416
+IIH D+K NILL N + +
Sbjct: 151 RIIHTDIKPENILLSVNEQYI 171
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 18/210 (8%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+L + F+ Q G GK Y + +RL +REV+++
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKF-----IKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
H N++ L ++ +L+ L L D ++ L + G+
Sbjct: 67 HPNIITLHDIFENKTDVVLIL----ELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 122
Query: 388 YLHEQCNPKIIHRDLKAANILLDD----NFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
YLH + +I H DLK NI+L D N L DFG+A ++A + I GT
Sbjct: 123 YLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA--GNEFKNIFGTPEF 177
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+APE ++ + D++ G+ L++G
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 397 IIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGK 453
++HRDLK N+LL + L DFGLA V GT G+++PE L
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGYLSPEVLRKEA 182
Query: 454 SSEKTDVFGYGITLLELVTG 473
+ D++ G+ L L+ G
Sbjct: 183 YGKPVDIWACGVILYILLVG 202
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 18/210 (8%)
Query: 268 QLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAI 327
+L + F+ Q G GK Y + +RL +REV+++
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKF-----IKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 328 HKNLLQLIGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLE 387
H N++ L ++ +L+ L L D ++ L + G+
Sbjct: 88 HPNIITLHDIFENKTDVVLIL----ELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 143
Query: 388 YLHEQCNPKIIHRDLKAANILLDD----NFEAVLCDFGLAKLVDAKLTHVTTQIRGTMGH 443
YLH + +I H DLK NI+L D N L DFG+A ++A + I GT
Sbjct: 144 YLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA--GNEFKNIFGTPEF 198
Query: 444 IAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
+APE ++ + D++ G+ L++G
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 38/201 (18%)
Query: 217 GAFVLLSLGALFACRYQKLRKLKHDVFFDVAGEDDCKVSLTQLRRFSCRELQLATDNFSE 276
G + L+ +G LF RY +RKL F V D Q ++F ++ + ++++E
Sbjct: 24 GGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDI-----QGKKFVAMKVVKSAEHYTE 78
Query: 277 SNIIGQGGFGKVYKGVLSD-NTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLI 335
+ + V +D N ++ V+ L D+ G + ++ + +LL+ I
Sbjct: 79 TALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGT---HICMVFEVLGHHLLKWI 135
Query: 336 GYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNP 395
+K +GL P K++ GL+YLH +C
Sbjct: 136 ---------------------------IKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC-- 166
Query: 396 KIIHRDLKAANILLDDNFEAV 416
+IIH D+K NILL N + +
Sbjct: 167 RIIHTDIKPENILLSVNEQYI 187
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 279 IIGQGGFGKV-YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
I+G G G V ++G VAVKR+ + + A L H N+++ Y
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFC---DIALMEIKLLTESDDHPNVIRY--Y 93
Query: 338 CTTSSERILVYPF-MQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG-------TAYGLEYL 389
C+ +++R L + NL+ L+DL + D + + + A G+ +L
Sbjct: 94 CSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 390 HEQCNPKIIHRDLKAANILLD-------------DNFEAVLCDFGLAKLVDAKLTHVTTQ 436
H KIIHRDLK NIL+ +N ++ DFGL K +D+
Sbjct: 150 HSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 437 IR---GTMGHIAPEYLSTGKSSEKT---DVFGYGITLLELVT 472
+ GT G APE L T D+F G +++
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 301 VKRLQDYYSPGG--EAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAY 358
+K+ Q S G +REV ++ +H N++ L ++ +L+ L
Sbjct: 45 IKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLIL----ELVSGG 100
Query: 359 RLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANI-LLDDNF---E 414
L D ++ L G+ YLH + KI H DLK NI LLD N
Sbjct: 101 ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157
Query: 415 AVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
L DFGLA ++ + I GT +APE ++ + D++ G+ L++G
Sbjct: 158 IKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 279 IIGQGGFGKV-YKGVLSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQLIGY 337
I+G G G V ++G VAVKR+ + + A L H N+++ Y
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFC---DIALMEIKLLTESDDHPNVIRY--Y 93
Query: 338 CTTSSERILVYPF-MQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG-------TAYGLEYL 389
C+ +++R L + NL+ L+DL + D + + + A G+ +L
Sbjct: 94 CSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 390 HEQCNPKIIHRDLKAANILLD-------------DNFEAVLCDFGLAKLVDAKLTHVTTQ 436
H KIIHRDLK NIL+ +N ++ DFGL K +D+
Sbjct: 150 HSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 437 IR---GTMGHIAPEYLSTGKSSEKT---DVFGYGITLLELVT 472
+ GT G APE L T D+F G +++
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 301 VKRLQDYYSPGG--EAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAY 358
+K+ Q S G +REV ++ +H N++ L ++ +L+ L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLIL----ELVSGG 100
Query: 359 RLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANI-LLDDNF---E 414
L D ++ L G+ YLH + KI H DLK NI LLD N
Sbjct: 101 ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157
Query: 415 AVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
L DFGLA ++ + I GT +APE ++ + D++ G+ L++G
Sbjct: 158 IKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 301 VKRLQDYYSPGG--EAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAY 358
+K+ Q S G +REV ++ +H N++ L ++ +L+ L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLIL----ELVSGG 100
Query: 359 RLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANI-LLDDNF---E 414
L D ++ L G+ YLH + KI H DLK NI LLD N
Sbjct: 101 ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157
Query: 415 AVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
L DFGLA ++ + I GT +APE ++ + D++ G+ L++G
Sbjct: 158 IKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 301 VKRLQDYYSPGG--EAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAY 358
+K+ Q S G +REV ++ +H N++ L ++ +L+ L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLIL----ELVSGG 100
Query: 359 RLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANI-LLDDNF---E 414
L D ++ L G+ YLH + KI H DLK NI LLD N
Sbjct: 101 ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157
Query: 415 AVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
L DFGLA ++ + I GT +APE ++ + D++ G+ L++G
Sbjct: 158 IKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 301 VKRLQDYYSPGG--EAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAY 358
+K+ Q S G +REV ++ +H N++ L ++ +L+ L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLIL----ELVSGG 100
Query: 359 RLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANI-LLDDNF---E 414
L D ++ L G+ YLH + KI H DLK NI LLD N
Sbjct: 101 ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157
Query: 415 AVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
L DFGLA ++ + I GT +APE ++ + D++ G+ L++G
Sbjct: 158 IKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 15/179 (8%)
Query: 301 VKRLQDYYSPGG--EAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFMQNLSVAY 358
+K+ Q S G +REV ++ +H N++ L ++ +L+ L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLIL----ELVSGG 100
Query: 359 RLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQCNPKIIHRDLKAANI-LLDDNF---E 414
L D ++ L G+ YLH + KI H DLK NI LLD N
Sbjct: 101 ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157
Query: 415 AVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
L DFGLA ++ + I GT +APE ++ + D++ G+ L++G
Sbjct: 158 IKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 47/219 (21%)
Query: 279 IIGQGGFGKV-YKGVLSDNTKVAVKR-LQDYYSPGGEAAFQREVHLISVAIHKNLLQLIG 336
I+G G G V ++G VAVKR L D+ + A L H N+++
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRY-- 74
Query: 337 YCTTSSERILVYPF-MQNLSVAYRLRDLKPGEKGLDWPTRKRVAFG-------TAYGLEY 388
YC+ +++R L + NL+ L+DL + D + + + A G+ +
Sbjct: 75 YCSETTDRFLYIALELCNLN----LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 389 LHEQCNPKIIHRDLKAANILLD-------------DNFEAVLCDFGLAKLVDAKLTHVTT 435
LH KIIHRDLK NIL+ +N ++ DFGL K +D+
Sbjct: 131 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 436 QIR---GTMGHIAPEYLSTGKS-------SEKTDVFGYG 464
+ GT G APE L + + D+F G
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL--CDFGLAKLVDAKLTHVTTQ-IRGTM 441
G+ Y H ++ HRDLK N LLD + L DFG +K A + H + GT
Sbjct: 127 GVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTP 180
Query: 442 GHIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
+IAPE L + K DV+ G+TL ++ G
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL--CDFGLAKLVDAKLTHVTTQIRGTMG 442
G+ Y H ++ HRDLK N LLD + L C FG +K + L GT
Sbjct: 127 GVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK--SSVLHSQPKDTVGTPA 181
Query: 443 HIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
+IAPE L + K DV+ G+TL ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 385 GLEYLHEQCNPKIIHRDLKAANILLDDNFEAVL--CDFGLAKLVDAKLTHVTTQIRGTMG 442
G+ Y H ++ HRDLK N LLD + L C FG +K + L GT
Sbjct: 127 GVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK--SSVLHSQPKSTVGTPA 181
Query: 443 HIAPEYLSTGKSSEKT-DVFGYGITLLELVTG 473
+IAPE L + K DV+ G+TL ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 293 LSDNTKVAVKRLQ-DYYSPGGEAAFQREVHLISVAIHKNLLQLIGYCTTSSERILVYPFM 351
+SDN VA+K ++ D S GE V + V LL+ + + R+L + F
Sbjct: 73 VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVSSGFSGVIRLLDW-FE 126
Query: 352 QNLSVAYRLRDLKPGEKGLDWPTRK--------RVAFGTAYGLEYLHEQCNPKIIHRDLK 403
+ S L +P + D+ T + R F LE + N ++HRD+K
Sbjct: 127 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV--LEAVRHCHNCGVLHRDIK 184
Query: 404 AANILLDDNF-EAVLCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYLSTGKSSEKT-DVF 461
NIL+D N E L DFG L+ V T GT + PE++ + ++ V+
Sbjct: 185 DENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVW 241
Query: 462 GYGITLLELVTG 473
GI L ++V G
Sbjct: 242 SLGILLYDMVCG 253
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 83 LGSNGFSGKISPSITKLKFLASFRELQDNDLSGTLPDFLGSMTHLQSLNLANNKFSGSIP 142
LG +ISP T L +LQ+ND+S D + HL +L L NNK S
Sbjct: 43 LGLKAVPKEISPDTTLL-------DLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHE 95
Query: 143 ATWSQLSNLKHLDLSSNNLTGRIPMQLFS 171
+S L L+ L +S N+L IP L S
Sbjct: 96 KAFSPLRKLQKLYISKNHLV-EIPPNLPS 123
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 22/223 (9%)
Query: 265 RELQLATDNFSESNIIGQGGFGKVYKGVLSDNTKVAVKRLQ---DYYSPGGEAAFQREVH 321
+E++L D+F +IG+G F +V + +V ++ D G + F+ E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 322 LISVAIHKNLLQLIGYCTTSSERILVYPFMQN---LSVAYRLRDLKPGEKGLDWPTRKRV 378
++ + + QL + LV + L++ + + P E + +
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 379 AFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR 438
A + + L Y +HRD+K NILLD L DFG + A T +
Sbjct: 174 AIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 439 GTMGHIAPEYLST-------GKSSEKTDVFGYGITLLELVTGQ 474
GT +++PE L G + D + G+ E+ GQ
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 41/233 (17%)
Query: 270 ATDNFS---------ESNIIGQGGFGKVYKGV-LSDNTKVAVKRLQDYYSPGGEAAFQRE 319
+TD+FS + +++G+G +V + L + + AVK ++ F+
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 320 VHLISVAIHKNLLQLIGYCTTSSERILVYPFMQN---LSVAYRLRDLKPGEKGLDWPTRK 376
L H+N+L+LI + LV+ M+ LS ++ R E +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV------ 115
Query: 377 RVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLDDNFEAV---LCDFGLAKLVDAKLTHV 433
V A L++LH N I HRDLK NIL + + +CDFGL + KL
Sbjct: 116 -VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGI--KLNGD 169
Query: 434 TTQIR--------GTMGHIAPEYLSTGKSS-----EKTDVFGYGITLLELVTG 473
+ I G+ ++APE + ++ D++ G+ L L++G
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 376 KRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLD--DNFEAV----LCDFGLAKLVDAK 429
K+++ GL+Y+H +C IIH D+K N+L++ D+ E + + D G A D
Sbjct: 134 KQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE- 190
Query: 430 LTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
H T I+ T + +PE L D++ + EL+TG
Sbjct: 191 --HYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 376 KRVAFGTAYGLEYLHEQCNPKIIHRDLKAANILLD--DNFEAV----LCDFGLAKLVDAK 429
K+++ GL+Y+H +C IIH D+K N+L++ D+ E + + D G A D
Sbjct: 134 KQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE- 190
Query: 430 LTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTG 473
H T I+ T + +PE L D++ + EL+TG
Sbjct: 191 --HYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 47/235 (20%)
Query: 274 FSESNIIGQGGFGKVYKGV----LSDNTKVAVKRLQDYYSPGGEAAFQREVHLISVAIHK 329
F + IG+G F VY + K+A+K L P AA E+ ++VA +
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAA---ELQCLTVAGGQ 79
Query: 330 NLLQLIGYCTTSSERILV-YPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEY 388
+ + + YC ++ +++ P++++ S L L + + L+
Sbjct: 80 DNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-------NSLSFQEVREYMLNLFKALKR 132
Query: 389 LHEQCNPKIIHRDLKAANILLDDNFEA-VLCDFGLAKLV-DAK---LTHVTTQIR----- 438
+H+ I+HRD+K +N L + + L DFGLA+ D K L V ++ +
Sbjct: 133 IHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCS 189
Query: 439 ------------------GTMGHIAPEYLST-GKSSEKTDVFGYGITLLELVTGQ 474
GT G APE L+ + D++ G+ L L++G+
Sbjct: 190 QNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 277 SNIIGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL- 334
S+I+GQG V++G + A+K + RE ++ HKN+++L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 335 -IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
I TT+ ++L+ F S+ Y + + GL V G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSL-YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 394 NPKIIHRDLKAANIL--LDDNFEAV--LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL 449
I+HR++K NI+ + ++ ++V L DFG A+ ++ V+ + GT ++ P+
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMY 187
Query: 450 STG--------KSSEKTDVFGYGITLLELVTG 473
K D++ G+T TG
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREV-HLISVAIHKN-LLQLI 335
IG GG KV++ VL++ ++ + + + +++ E+ +L + H + +++L
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 336 GYCTTSSERILVYPFMQ--NLSVAYRLRDLK---PGEKGLDWPTRKRVAFGTAYGLEYLH 390
Y T +Y M+ N+ + L+ K P E+ W LE +H
Sbjct: 123 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM----------LEAVH 169
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR-GTMGHIAPEYL 449
I+H DLK AN L+ D L DFG+A + T V + GT+ ++ PE +
Sbjct: 170 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 450 STGKSSEKT-----------DVFGYGITLLELVTGQ 474
SS + DV+ G L + G+
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 21/212 (9%)
Query: 277 SNIIGQGGFGKVYKGVLSDNTKV-AVKRLQDYYSPGGEAAFQREVHLISVAIHKNLLQL- 334
S+I+GQG V++G + A+K + RE ++ HKN+++L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 335 -IGYCTTSSERILVYPFMQNLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAYGLEYLHEQC 393
I TT+ ++L+ F S+ Y + + GL V G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSL-YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 394 NPKIIHRDLKAANIL--LDDNFEAV--LCDFGLAKLVDAKLTHVTTQIRGTMGHIAPEYL 449
I+HR++K NI+ + ++ ++V L DFG A+ ++ V + GT ++ P+
Sbjct: 133 ---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMY 187
Query: 450 STG--------KSSEKTDVFGYGITLLELVTG 473
K D++ G+T TG
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREV-HLISVAIHKN-LLQLI 335
IG GG KV++ VL++ ++ + + + +++ E+ +L + H + +++L
Sbjct: 36 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 336 GYCTTSSERILVYPFMQ--NLSVAYRLRDLK---PGEKGLDWPTRKRVAFGTAYGLEYLH 390
Y T +Y M+ N+ + L+ K P E+ W LE +H
Sbjct: 95 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM----------LEAVH 141
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR-GTMGHIAPEYL 449
I+H DLK AN L+ D L DFG+A + T V + GT+ ++ PE +
Sbjct: 142 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200
Query: 450 STGKSSEKT-----------DVFGYGITLLELVTGQ 474
SS + DV+ G L + G+
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 13/101 (12%)
Query: 386 LEYLHEQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR-GTMGHI 444
LE +H I+H DLK AN L+ D L DFG+A + T V + GT+ ++
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 445 APEYLSTGKSSEKT-----------DVFGYGITLLELVTGQ 474
PE + SS + DV+ G L + G+
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 280 IGQGGFGKVYKGVLSDNTKVAVKRLQDYYSPGGEA--AFQREV-HLISVAIHKN-LLQLI 335
IG GG KV++ VL++ ++ + + + +++ E+ +L + H + +++L
Sbjct: 17 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 336 GYCTTSSERILVYPFMQ--NLSVAYRLRDLK---PGEKGLDWPTRKRVAFGTAYGLEYLH 390
Y T +Y M+ N+ + L+ K P E+ W LE +H
Sbjct: 76 DYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM----------LEAVH 122
Query: 391 EQCNPKIIHRDLKAANILLDDNFEAVLCDFGLAKLVDAKLTHVTTQIR-GTMGHIAPEYL 449
I+H DLK AN L+ D L DFG+A + T V + GT+ ++ PE +
Sbjct: 123 TIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
Query: 450 STGKSSEKT-----------DVFGYGITLLELVTGQ 474
SS + DV+ G L + G+
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,170,261
Number of Sequences: 62578
Number of extensions: 630937
Number of successful extensions: 4019
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 264
Number of HSP's that attempted gapping in prelim test: 1509
Number of HSP's gapped (non-prelim): 1385
length of query: 596
length of database: 14,973,337
effective HSP length: 104
effective length of query: 492
effective length of database: 8,465,225
effective search space: 4164890700
effective search space used: 4164890700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)