Query 007619
Match_columns 595
No_of_seqs 651 out of 4368
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 06:18:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007619.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007619hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wdy_A 2-5A-dependent ribonucl 100.0 1.4E-28 4.7E-33 247.4 24.4 221 168-397 5-248 (285)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 1.1E-29 3.7E-34 253.5 15.5 216 168-393 10-247 (253)
3 1wdy_A 2-5A-dependent ribonucl 100.0 1.8E-28 6E-33 246.6 23.7 221 170-398 41-282 (285)
4 4b93_B Ankyrin repeat domain-c 100.0 5.4E-30 1.9E-34 258.9 10.7 204 169-381 12-230 (269)
5 1n11_A Ankyrin; clathrin, BAND 100.0 9.3E-28 3.2E-32 258.4 28.9 359 168-563 14-401 (437)
6 3ljn_A Hypothetical protein; a 100.0 4E-29 1.4E-33 262.6 17.4 224 166-395 18-270 (364)
7 3aji_A 26S proteasome non-ATPa 100.0 4.2E-29 1.4E-33 244.7 16.1 214 171-394 9-230 (231)
8 1n11_A Ankyrin; clathrin, BAND 100.0 4.3E-28 1.5E-32 261.0 25.1 296 170-496 82-386 (437)
9 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-28 3.9E-33 247.4 18.7 212 170-396 5-224 (261)
10 1k1a_A B-cell lymphoma 3-encod 100.0 3.3E-29 1.1E-33 246.6 14.3 217 170-393 11-240 (241)
11 3b7b_A Euchromatic histone-lys 100.0 1.4E-28 4.7E-33 242.0 18.6 209 170-389 13-230 (237)
12 4g8k_A 2-5A-dependent ribonucl 100.0 2.9E-28 9.8E-33 253.3 21.4 215 168-391 25-261 (337)
13 1oy3_D Transcription factor in 100.0 1.5E-28 5E-33 247.6 18.1 203 170-380 11-269 (282)
14 2fo1_E LIN-12 protein; beta-ba 100.0 3.8E-29 1.3E-33 264.4 14.5 215 170-394 127-371 (373)
15 1oy3_D Transcription factor in 100.0 1.3E-28 4.5E-33 247.9 17.4 191 200-399 6-255 (282)
16 3d9h_A CDNA FLJ77766, highly s 100.0 2.9E-28 9.8E-33 248.0 19.6 218 168-397 15-250 (285)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 1.1E-28 3.8E-33 246.1 16.2 189 200-397 7-218 (253)
18 3utm_A Tankyrase-1; tankyrase, 100.0 2.7E-28 9.3E-33 253.1 19.5 219 168-397 24-308 (351)
19 2xai_A ASB-9, ankyrin repeat a 100.0 2.7E-28 9.3E-33 244.6 17.5 187 202-398 2-195 (261)
20 2f8y_A Notch homolog 1, transl 100.0 1.3E-28 4.4E-33 239.9 14.1 204 182-395 5-217 (223)
21 4gpm_A Engineered protein OR26 100.0 2.8E-28 9.7E-33 229.0 15.7 142 246-395 17-162 (169)
22 4b93_B Ankyrin repeat domain-c 100.0 4E-28 1.4E-32 245.2 17.3 191 200-398 8-214 (269)
23 3b7b_A Euchromatic histone-lys 100.0 1.3E-27 4.4E-32 235.0 19.7 189 200-397 8-205 (237)
24 3d9h_A CDNA FLJ77766, highly s 100.0 4.5E-28 1.5E-32 246.6 16.2 210 170-394 61-279 (285)
25 1k1a_A B-cell lymphoma 3-encod 100.0 2.1E-27 7E-32 233.7 18.2 189 200-397 6-211 (241)
26 2dzn_A Probable 26S proteasome 99.9 1E-27 3.5E-32 234.1 15.4 201 170-379 4-218 (228)
27 2rfa_A Transient receptor pote 99.9 1.7E-27 5.9E-32 233.5 16.3 188 171-395 6-223 (232)
28 3eu9_A Huntingtin-interacting 99.9 3.8E-27 1.3E-31 230.9 18.4 215 170-395 11-236 (240)
29 1ikn_D Protein (I-kappa-B-alph 99.9 3.9E-28 1.3E-32 239.2 10.4 188 200-396 5-211 (236)
30 2fo1_E LIN-12 protein; beta-ba 99.9 6.8E-28 2.3E-32 254.9 12.8 215 170-397 96-341 (373)
31 3kea_A K1L; tropism, ANK repea 99.9 2.5E-27 8.6E-32 241.1 16.1 207 177-399 9-225 (285)
32 3hra_A Ankyrin repeat family p 99.9 5.4E-27 1.8E-31 224.6 17.3 182 203-392 5-201 (201)
33 3aji_A 26S proteasome non-ATPa 99.9 8.8E-27 3E-31 228.1 19.1 187 202-397 5-200 (231)
34 2dzn_A Probable 26S proteasome 99.9 1E-26 3.5E-31 227.0 19.4 188 204-397 3-203 (228)
35 2etb_A Transient receptor pote 99.9 1.1E-27 3.6E-32 239.0 12.5 194 169-395 3-247 (256)
36 4g8k_A 2-5A-dependent ribonucl 99.9 1.6E-26 5.6E-31 240.1 21.7 219 170-396 61-300 (337)
37 3utm_A Tankyrase-1; tankyrase, 99.9 8.6E-27 2.9E-31 241.8 19.4 212 170-393 60-333 (351)
38 1s70_B 130 kDa myosin-binding 99.9 1.4E-27 4.6E-32 243.3 12.6 201 169-380 41-276 (299)
39 3kea_A K1L; tropism, ANK repea 99.9 3.2E-27 1.1E-31 240.4 12.0 207 170-396 33-248 (285)
40 3ljn_A Hypothetical protein; a 99.9 5.6E-27 1.9E-31 246.2 13.9 187 200-397 17-239 (364)
41 1s70_B 130 kDa myosin-binding 99.9 1.6E-26 5.6E-31 235.2 16.0 189 201-397 38-260 (299)
42 2pnn_A Transient receptor pote 99.9 7.4E-27 2.5E-31 235.3 12.9 191 200-396 10-261 (273)
43 2f8y_A Notch homolog 1, transl 99.9 9.7E-26 3.3E-30 219.4 16.8 173 216-397 8-186 (223)
44 3jxi_A Vanilloid receptor-rela 99.9 3.4E-26 1.2E-30 228.4 12.3 196 169-395 6-251 (260)
45 4gpm_A Engineered protein OR26 99.9 1.1E-25 3.7E-30 211.3 14.6 155 170-364 6-164 (169)
46 2rfa_A Transient receptor pote 99.9 4.7E-25 1.6E-29 216.1 17.3 133 260-396 27-185 (232)
47 2rfm_A Putative ankyrin repeat 99.9 1.7E-25 5.7E-30 213.2 13.3 131 259-393 57-191 (192)
48 3eu9_A Huntingtin-interacting 99.9 5.8E-25 2E-29 215.3 17.1 217 200-438 6-232 (240)
49 2etb_A Transient receptor pote 99.9 6.3E-26 2.2E-30 226.1 9.8 137 258-395 27-207 (256)
50 2y1l_E Darpin-8.4; hydrolase-i 99.9 7.2E-25 2.5E-29 204.7 15.5 131 258-392 35-169 (169)
51 3v31_A Ankyrin repeat family A 99.9 8.3E-25 2.8E-29 203.4 15.1 154 232-394 3-160 (167)
52 1ihb_A P18-INK4C(INK6), cyclin 99.9 6.3E-25 2.2E-29 202.8 14.2 131 259-394 27-162 (162)
53 4hbd_A KN motif and ankyrin re 99.9 2.2E-25 7.4E-30 225.8 11.7 167 217-392 94-273 (276)
54 1ikn_D Protein (I-kappa-B-alph 99.9 1.3E-25 4.4E-30 221.1 9.6 165 228-397 4-179 (236)
55 1d9s_A Cyclin-dependent kinase 99.9 4.4E-25 1.5E-29 198.6 11.9 130 260-394 2-136 (136)
56 3hra_A Ankyrin repeat family p 99.9 3E-24 1E-28 205.4 17.2 161 230-397 3-173 (201)
57 1sw6_A Regulatory protein SWI6 99.9 1.8E-25 6E-30 232.1 8.6 190 170-380 99-327 (327)
58 3v30_A DNA-binding protein rfx 99.9 1.3E-24 4.5E-29 203.1 13.7 128 269-397 32-163 (172)
59 1sw6_A Regulatory protein SWI6 99.9 1.7E-25 6E-30 232.1 6.5 208 181-398 32-312 (327)
60 1awc_B Protein (GA binding pro 99.9 3.8E-24 1.3E-28 196.3 14.2 118 270-388 31-152 (153)
61 2rfm_A Putative ankyrin repeat 99.9 5.4E-24 1.8E-28 202.7 15.4 129 268-397 30-162 (192)
62 2pnn_A Transient receptor pote 99.9 9.1E-25 3.1E-29 220.0 9.3 170 225-396 6-220 (273)
63 3twr_A Tankyrase-2; ankyrin re 99.9 2.3E-24 8E-29 200.0 11.0 122 270-393 39-164 (165)
64 3f6q_A Integrin-linked protein 99.9 3.2E-24 1.1E-28 202.1 12.0 133 261-397 30-166 (179)
65 3jxi_A Vanilloid receptor-rela 99.9 1.3E-24 4.3E-29 217.0 9.5 137 259-396 31-212 (260)
66 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-23 5.7E-28 188.3 13.7 122 270-392 11-136 (136)
67 3v31_A Ankyrin repeat family A 99.9 4.2E-23 1.4E-27 191.9 16.1 125 272-397 2-130 (167)
68 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3.3E-23 1.1E-27 190.2 14.4 124 262-391 28-155 (156)
69 3htm_A Speckle-type POZ protei 99.9 1.3E-23 4.5E-28 197.4 11.3 152 45-233 16-167 (172)
70 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.8E-23 2.3E-27 180.1 15.1 122 272-394 1-126 (126)
71 3c5r_A BARD-1, BRCA1-associate 99.9 5.5E-24 1.9E-28 191.4 7.4 129 260-393 1-133 (137)
72 3twr_A Tankyrase-2; ankyrin re 99.9 8.5E-23 2.9E-27 189.4 15.4 127 270-397 5-136 (165)
73 1awc_B Protein (GA binding pro 99.9 9.7E-23 3.3E-27 186.8 15.3 124 273-397 2-128 (153)
74 3v30_A DNA-binding protein rfx 99.9 1.9E-22 6.4E-27 188.4 17.2 124 273-397 2-130 (172)
75 1bi7_B P16INK4A, MTS1, multipl 99.9 2E-23 6.7E-28 192.4 9.8 128 269-398 8-140 (156)
76 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.8E-22 6.3E-27 188.3 16.4 127 270-397 11-141 (169)
77 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.6E-22 5.4E-27 186.7 15.4 151 201-361 3-162 (162)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.8E-23 6E-28 206.9 9.6 156 231-396 4-166 (239)
79 3f6q_A Integrin-linked protein 99.9 3.7E-22 1.3E-26 187.9 17.1 127 270-397 2-133 (179)
80 2vge_A RELA-associated inhibit 99.9 2.8E-23 9.7E-28 204.5 8.9 140 257-397 5-151 (229)
81 3t8k_A Uncharacterized protein 99.9 1.8E-23 6.1E-28 199.3 6.9 148 235-392 9-177 (186)
82 4hbd_A KN motif and ankyrin re 99.9 1.9E-22 6.5E-27 204.1 13.8 128 269-397 107-245 (276)
83 4eoz_A Speckle-type POZ protei 99.9 7.7E-23 2.7E-27 186.5 7.6 138 45-219 7-144 (145)
84 3hve_A Gigaxonin; ubiquitin, c 99.9 1.4E-22 4.7E-27 203.1 9.8 154 44-234 12-167 (256)
85 3aaa_C Myotrophin, protein V-1 99.9 2E-22 6.8E-27 177.8 9.4 108 270-378 4-115 (123)
86 1bd8_A P19INK4D CDK4/6 inhibit 99.9 9.7E-22 3.3E-26 180.3 14.4 121 273-396 2-127 (156)
87 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.5E-22 5.1E-27 200.2 9.1 127 270-397 2-131 (239)
88 3i3n_A Kelch-like protein 11; 99.9 3.1E-22 1E-26 203.2 7.3 160 44-234 13-175 (279)
89 1bi7_B P16INK4A, MTS1, multipl 99.9 7.9E-22 2.7E-26 181.6 8.7 115 258-377 33-152 (156)
90 2if5_A Zinc finger and BTB dom 99.9 2.4E-21 8.3E-26 170.9 11.3 113 45-191 7-119 (120)
91 3ehr_A Osteoclast-stimulating 99.9 5.6E-22 1.9E-26 193.4 7.9 127 270-396 70-200 (222)
92 2vge_A RELA-associated inhibit 99.8 3.5E-24 1.2E-28 211.0 -8.2 176 200-387 18-206 (229)
93 2ppi_A Gigaxonin; BTB domain, 99.8 4.4E-21 1.5E-25 174.9 13.0 120 40-191 24-143 (144)
94 3hqi_A Speckle-type POZ protei 99.8 2E-21 7E-26 200.3 12.0 151 45-232 156-306 (312)
95 2z8h_A Transcription regulator 99.8 6.3E-21 2.2E-25 172.6 12.9 118 44-196 17-134 (138)
96 3deo_A Signal recognition part 99.8 3.5E-21 1.2E-25 182.2 9.8 112 270-383 41-157 (183)
97 1d9s_A Cyclin-dependent kinase 99.8 3.3E-21 1.1E-25 173.1 8.3 125 227-361 7-136 (136)
98 3b84_A Zinc finger and BTB dom 99.8 1.6E-20 5.5E-25 165.5 11.8 111 45-193 6-116 (119)
99 1r29_A B-cell lymphoma 6 prote 99.8 2.3E-20 7.8E-25 166.4 12.5 114 44-192 10-124 (127)
100 3ui2_A Signal recognition part 99.8 5.8E-21 2E-25 189.6 9.5 109 270-380 42-155 (244)
101 2yy9_A Zinc finger and BTB dom 99.8 1.7E-20 5.9E-25 169.0 11.1 115 44-196 6-120 (135)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.6E-20 1.2E-24 155.0 11.9 92 301-393 1-92 (93)
103 1dcq_A PYK2-associated protein 99.8 6.9E-20 2.3E-24 185.7 14.4 124 272-396 129-265 (278)
104 2vpk_A Myoneurin; transcriptio 99.8 5.4E-20 1.8E-24 161.2 11.1 110 45-192 4-115 (116)
105 2q81_A MIZ-1 protein; BTB/POZ 99.8 2.9E-20 1E-24 163.7 9.4 109 45-192 9-117 (119)
106 3t8k_A Uncharacterized protein 99.8 8.2E-21 2.8E-25 180.8 6.2 126 273-399 6-151 (186)
107 1buo_A POZ domain, protein (pr 99.8 3.2E-20 1.1E-24 164.0 9.2 109 45-192 10-118 (121)
108 3ohu_A Transcription regulator 99.8 8.4E-21 2.9E-25 168.7 4.9 113 43-190 12-124 (125)
109 3lvq_E ARF-GAP with SH3 domain 99.8 1.2E-19 4E-24 199.1 14.4 125 274-399 133-270 (497)
110 2ihc_A Transcription regulator 99.8 1.4E-20 4.7E-25 167.1 4.4 112 45-191 11-122 (124)
111 3jue_A Arfgap with coiled-coil 99.8 1.8E-19 6.2E-24 189.6 13.6 123 270-393 196-325 (368)
112 2l6b_A NR1C; ankyrin, consensu 99.8 6.3E-20 2.2E-24 159.5 8.3 104 269-373 5-112 (115)
113 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.4E-19 8.4E-24 149.9 11.6 89 272-361 1-93 (93)
114 2vkp_A BTB/POZ domain-containi 99.8 8.3E-20 2.8E-24 158.1 8.9 101 57-192 2-106 (109)
115 2b0o_E UPLC1; arfgap, structur 99.8 2.6E-19 9E-24 183.5 13.6 121 272-393 150-283 (301)
116 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.5E-19 8.6E-24 157.1 11.2 99 259-361 24-126 (126)
117 2b0o_E UPLC1; arfgap, structur 99.8 4.6E-20 1.6E-24 189.2 7.1 106 270-382 187-299 (301)
118 2aja_A Ankyrin repeat family p 99.8 1.2E-20 4.1E-25 199.3 2.7 168 178-396 76-252 (376)
119 2jab_A H10-2-G3; HER2, darpin, 99.8 2.1E-19 7.2E-24 161.3 10.4 97 259-359 36-136 (136)
120 3ga1_A Nucleus accumbens-assoc 99.8 1.3E-19 4.6E-24 161.9 5.5 112 45-194 15-127 (129)
121 3c5r_A BARD-1, BRCA1-associate 99.8 1.5E-18 5.1E-23 155.7 12.0 99 298-397 6-104 (137)
122 3fkc_A Transcriptional regulat 99.8 1E-18 3.5E-23 153.1 9.4 102 45-185 13-115 (116)
123 3aaa_C Myotrophin, protein V-1 99.8 8.2E-18 2.8E-22 148.0 13.4 99 298-397 3-101 (123)
124 2aja_A Ankyrin repeat family p 99.7 1.3E-19 4.3E-24 191.4 1.3 121 270-392 89-222 (376)
125 2l6b_A NR1C; ankyrin, consensu 99.7 3.1E-18 1.1E-22 148.8 8.3 100 298-398 5-104 (115)
126 3lvq_E ARF-GAP with SH3 domain 99.7 5.4E-18 1.9E-22 185.8 11.4 102 270-378 168-276 (497)
127 3ehr_A Osteoclast-stimulating 99.7 9.2E-19 3.2E-23 170.5 4.4 108 259-370 95-207 (222)
128 3ui2_A Signal recognition part 99.7 7.5E-19 2.6E-23 174.3 3.2 124 271-396 13-138 (244)
129 3m5b_A Zinc finger and BTB dom 99.7 3.7E-18 1.3E-22 150.1 7.3 103 46-193 15-117 (119)
130 2zgd_A 3 repeat synthetic anky 99.7 1.3E-17 4.5E-22 144.1 10.4 91 297-388 19-109 (110)
131 1dcq_A PYK2-associated protein 99.7 2.7E-17 9.2E-22 166.6 11.7 122 235-362 133-264 (278)
132 3jue_A Arfgap with coiled-coil 99.7 2.6E-17 8.9E-22 173.1 11.3 142 232-380 199-348 (368)
133 3deo_A Signal recognition part 99.7 3.9E-18 1.3E-22 161.2 3.6 97 299-397 41-138 (183)
134 2zgd_A 3 repeat synthetic anky 99.6 7.1E-16 2.4E-20 133.1 9.8 86 269-355 20-109 (110)
135 2ast_A S-phase kinase-associat 98.9 3.4E-09 1.2E-13 97.5 8.5 116 68-196 3-127 (159)
136 4ajy_C Transcription elongatio 98.6 6.3E-08 2.2E-12 81.2 7.3 82 68-179 4-96 (97)
137 1fs1_B SKP1, cyclin A/CDK2-ass 98.2 2.7E-06 9.1E-11 76.4 8.3 112 68-196 4-122 (141)
138 2p1m_A SKP1-like protein 1A; F 98.0 6.7E-07 2.3E-11 82.1 0.1 113 68-196 6-126 (160)
139 3drz_A BTB/POZ domain-containi 97.6 0.00021 7.3E-09 60.6 9.2 96 68-191 8-104 (107)
140 1hv2_A Elongin C, ELC1; protei 97.5 0.00032 1.1E-08 58.6 8.5 93 68-180 6-99 (99)
141 2fnj_C Transcription elongatio 97.4 0.00025 8.5E-09 58.9 6.3 90 68-180 3-96 (96)
142 3v7d_A Suppressor of kinetocho 96.9 0.0027 9.1E-08 58.4 8.3 120 68-196 9-134 (169)
143 3drx_A BTB/POZ domain-containi 96.3 0.012 4.2E-07 55.1 8.6 99 68-194 14-113 (202)
144 1vcb_B Protein (elongin C); tu 95.8 0.012 4.2E-07 50.0 5.7 90 68-180 19-112 (112)
145 3kvt_A Potassium channel prote 92.2 0.17 5.6E-06 43.2 5.0 85 68-183 7-92 (115)
146 1t1d_A Protein (potassium chan 91.1 0.26 8.8E-06 40.8 4.9 86 68-184 3-90 (100)
147 1s1g_A Potassium voltage-gated 86.2 0.4 1.4E-05 41.3 2.9 87 67-184 14-100 (124)
148 2nz0_B Potassium voltage-gated 82.9 0.73 2.5E-05 40.5 3.1 86 67-183 36-121 (140)
149 1nn7_A Potassium channel KV4.2 79.0 1.4 4.7E-05 36.7 3.3 85 68-183 2-86 (105)
150 2eqx_A Kelch repeat and BTB do 61.6 3.4 0.00011 34.1 1.9 52 200-252 10-61 (105)
151 2r9r_B Paddle chimera voltage 39.3 19 0.00064 38.7 3.8 87 67-184 53-141 (514)
152 4a1q_A ORF E73; viral protein, 29.9 9 0.00031 27.6 -0.5 10 508-517 63-72 (73)
153 3gna_A RAG-1, V(D)J recombinat 23.7 64 0.0022 24.7 3.2 25 544-570 33-57 (96)
No 1
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=1.4e-28 Score=247.40 Aligned_cols=221 Identities=20% Similarity=0.102 Sum_probs=196.8
Q ss_pred HHHHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcc
Q 007619 168 AIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDE 243 (595)
Q Consensus 168 v~elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~ 243 (595)
...+|+.|+..+..++++++++.+.+++... ...+.||||+|+..+. +.|++.++++..++..+.|+++.++..+
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 4578999999999999999999998877642 4567899999999997 6788888999889999999999988887
Q ss_pred hHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC-------------CCCCchHHHHH
Q 007619 244 VSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV-------------TLDDAYALHYA 309 (595)
Q Consensus 244 ~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i-------------n~~G~tpLh~A 309 (595)
. .+++++|+ ++|++++.. +..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|
T Consensus 84 ~-~~~v~~Ll----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A 155 (285)
T 1wdy_A 84 S-VKLLKLFL----SKGADVNEC---DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 155 (285)
T ss_dssp C-HHHHHHHH----HTTCCTTCB---CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHH
T ss_pred C-HHHHHHHH----HcCCCCCcc---CcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHH
Confidence 7 66777773 458888877 889999999999999999999999999 44 45689999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC----HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhH
Q 007619 310 AAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKE----PAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDY 385 (595)
Q Consensus 310 a~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~----~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v 385 (595)
+..|+.++++.|+...|++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 156 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 235 (285)
T 1wdy_A 156 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLV 235 (285)
T ss_dssp HHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 999999999999998559999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHH-cCCCchh
Q 007619 386 IEATK-QGQETNK 397 (595)
Q Consensus 386 ~~l~~-~g~~~~~ 397 (595)
+.|++ .|.++..
T Consensus 236 ~~Ll~~~g~~~~~ 248 (285)
T 1wdy_A 236 QRLLEQEHIEIND 248 (285)
T ss_dssp HHHHHSSSCCTTC
T ss_pred HHHHhccCCCccc
Confidence 99998 7776543
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=1.1e-29 Score=253.53 Aligned_cols=216 Identities=15% Similarity=0.097 Sum_probs=166.3
Q ss_pred HHHHHHHHHHcC-------------hHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCC
Q 007619 168 AIELMYASAAFQ-------------MKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSN 230 (595)
Q Consensus 168 v~elL~~A~~~~-------------l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~ 230 (595)
...+|+.|+..| ..++++++++.+.+.+... +.++.||||+|+.++. +.|+++++++..++.
T Consensus 10 g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 88 (253)
T 1yyh_A 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQT-DRTGETALHLAARYSRSDAAKRLLEASADANIQDN 88 (253)
T ss_dssp ------------------------------------------CC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 446777777766 7899999999998876532 5678999999999997 678889999999999
Q ss_pred CCcccccccCCcchHHHHHHHHhhhcccccc-cccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchH
Q 007619 231 LDDVCLEKELPDEVSGEIKSLRVKSDEECEA-NIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYA 305 (595)
Q Consensus 231 ~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga-~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tp 305 (595)
.+.|+++.++..+. .+++++|+. +|+ +++.. +..|.||||+|+..|+.+++++|++.| ++ |..|+||
T Consensus 89 ~g~t~L~~A~~~~~-~~~v~~Ll~----~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~ 160 (253)
T 1yyh_A 89 MGRTPLHAAVSADA-QGVFQILIR----NRATDLDAR---MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSA 160 (253)
T ss_dssp TSCCHHHHHHHHTC-HHHHHHHHH----STTSCTTCC---CTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBH
T ss_pred CCCCHHHHHHHcCC-HHHHHHHHH----cCCCCcccc---CCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 99999999988877 566776643 344 55555 889999999999999999999999999 55 4789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhH
Q 007619 306 LHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDY 385 (595)
Q Consensus 306 Lh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v 385 (595)
||+|+..|+.+++++||+.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 161 L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~ 239 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV 239 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCC
Q 007619 386 IEATKQGQ 393 (595)
Q Consensus 386 ~~l~~~g~ 393 (595)
.++.....
T Consensus 240 ~~l~~~~~ 247 (253)
T 1yyh_A 240 RLLDLEHH 247 (253)
T ss_dssp HHHHC---
T ss_pred HHHHHHhh
Confidence 99887654
No 3
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=1.8e-28 Score=246.61 Aligned_cols=221 Identities=20% Similarity=0.169 Sum_probs=199.0
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchH
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l 245 (595)
.+|++|+..+..++++++++.+++.+.+ +.++.||||+|+..+. +.|+++++++...+..+.|+++.++..+.
T Consensus 41 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~- 117 (285)
T 1wdy_A 41 TPLHNAVQMSREDIVELLLRHGADPVLR--KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK- 117 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC-
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCC-
Confidence 5799999999999999999999998776 6778999999999997 67888889999899999999999888877
Q ss_pred HHHHHHHhhhcccccccccccCCC-------CCCCCcHHHHHHhcCCHHHHHHHHHC-C-CC---CCCCchHHHHHHHcC
Q 007619 246 GEIKSLRVKSDEECEANIAEVDPM-------HAKRVRRIHKALDSDDVELLKLLLDE-S-NV---TLDDAYALHYAAAYC 313 (595)
Q Consensus 246 ~~ii~lL~~~~~~~Ga~~~~~~~~-------d~~g~tpLh~A~~~g~~e~v~~LL~~-g-~i---n~~G~tpLh~Aa~~g 313 (595)
.+++++|. ++|++++..+.. +..|.||||+|+..|+.+++++|++. | ++ |..|.||||+|+..+
T Consensus 118 ~~~~~~Ll----~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 193 (285)
T 1wdy_A 118 VKALKFLY----KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 193 (285)
T ss_dssp HHHHHHHH----HTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCS
T ss_pred HHHHHHHH----HhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcc
Confidence 66677763 457787765332 67899999999999999999999998 7 44 578999999999999
Q ss_pred C----HHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh-CCCCccccCCCCCcHHHHHHHcCChhhHHHH
Q 007619 314 N----PKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLS-KGACASETTSDGQTAVAICRRMTRRKDYIEA 388 (595)
Q Consensus 314 ~----~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~-~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l 388 (595)
+ .++++.|+..| +++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|
T Consensus 194 ~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~L 272 (285)
T 1wdy_A 194 DDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 272 (285)
T ss_dssp CTTTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccchHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHH
Confidence 9 89999999998 9999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHcCCCchhh
Q 007619 389 TKQGQETNKD 398 (595)
Q Consensus 389 ~~~g~~~~~~ 398 (595)
++.|+++...
T Consensus 273 l~~Ga~~~~~ 282 (285)
T 1wdy_A 273 CKRGASTDCG 282 (285)
T ss_dssp HHHSSCSCCS
T ss_pred HHcCCCCCcc
Confidence 9999987643
No 4
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=5.4e-30 Score=258.94 Aligned_cols=204 Identities=22% Similarity=0.212 Sum_probs=153.3
Q ss_pred HHHHHHHHHcChHHHHHHHHHcCCCchhh------cccCCcHHHHHHHHHcCh-----HHHHhchhhccccCCCCccccc
Q 007619 169 IELMYASAAFQMKELVLLFQRRLLNFVEK------ALVEDVIPILVAAFHCQL-----NQLRSHCVQRVVRSNLDDVCLE 237 (595)
Q Consensus 169 ~elL~~A~~~~l~~L~~l~~~~l~~~~~k------~~~~n~~t~L~~A~~~~~-----~~Ll~~~~~~i~~~~~~~t~L~ 237 (595)
.+.|+.|+..|..++++++++.+...... .....+.+||+.|+.++. ..|++.+++++.++..|.||||
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh 91 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLH 91 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 46788899999999999999988753221 114567889999987764 4678888999999889999999
Q ss_pred ccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcC
Q 007619 238 KELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYC 313 (595)
Q Consensus 238 ~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g 313 (595)
.|+..+. .+++++|+ ..|++++.. +..|.||+|+|+..++.+++++|++.| ++ |..|+||||+|+..|
T Consensus 92 ~A~~~g~-~~~v~~Ll----~~~a~~~~~---~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 92 VAALHGR-ADLIPLLL----KHGANAGAR---NADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp HHHHTTC-TTHHHHHH----HTTCCTTCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred HHHHcCc-HHHHHHHH----hcCCCcCcc---CCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 8887776 55666663 457787776 788999999999999999999999998 55 478999999999999
Q ss_pred CHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCC
Q 007619 314 NPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTR 381 (595)
Q Consensus 314 ~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~ 381 (595)
+.+++++||+.| +++|.++..|+||||+|+..|+.++|++||++|||++.+|.+|+||||+|+++++
T Consensus 164 ~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 164 HHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp CGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred CHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 999999999987 9999999999999999999999999999999999999999999999999987664
No 5
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=9.3e-28 Score=258.35 Aligned_cols=359 Identities=17% Similarity=0.141 Sum_probs=262.6
Q ss_pred HHHHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcc
Q 007619 168 AIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDE 243 (595)
Q Consensus 168 v~elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~ 243 (595)
...+|+.|+.+|..++++++++.+++.+.. +..+.||||+|+..|. +.|++.+++++.++..+.|+++.++..+
T Consensus 14 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 91 (437)
T 1n11_A 14 GLTPLHVASFMGHLPIVKNLLQRGASPNVS--NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIG 91 (437)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSCCS--SSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC
Confidence 346899999999999999999999988775 5678999999999997 6788888999999999999999998888
Q ss_pred hHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-C---CCCCCchHHHHHHHcCCHHHHH
Q 007619 244 VSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-N---VTLDDAYALHYAAAYCNPKVFK 319 (595)
Q Consensus 244 ~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~---in~~G~tpLh~Aa~~g~~~~v~ 319 (595)
. .+++++|+ ++|++++.. +..|.||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.++++
T Consensus 92 ~-~~~v~~Ll----~~ga~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 163 (437)
T 1n11_A 92 H-TNMVKLLL----ENNANPNLA---TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 163 (437)
T ss_dssp C-HHHHHHHH----HHTCCTTCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred C-HHHHHHHH----hCCCCCCCC---CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence 8 67777774 558888877 889999999999999999999999998 3 3578999999999999999999
Q ss_pred HHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh--
Q 007619 320 EVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK-- 397 (595)
Q Consensus 320 ~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~-- 397 (595)
+|+..+ +++|..+..|+||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.++++.|++.|.++..
T Consensus 164 ~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 242 (437)
T 1n11_A 164 LLLERD-AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES 242 (437)
T ss_dssp HHHHTT-CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 999998 99999999999999999999999999999999999999999999999999999999999999998865542
Q ss_pred -----------hcccHHHHHHHHhccc------cCCCcccchhhhcchhHHHHHhhhhhhhHHhhcCcchhhHHHhhhcc
Q 007619 398 -----------DRLCIDVLEREMRRNS------MSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVAMHIADA 460 (595)
Q Consensus 398 -----------~~~~~~~le~~~~~~p------~~~~~~~~~~~~~~~~~~~l~~le~~v~~~r~l~~~ea~~~~~ia~~ 460 (595)
.....++++..+...+ ..|.+++..+...+...+..+++++...+- .....+..++.+|..
T Consensus 243 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~g~t~L~~A~~ 320 (437)
T 1n11_A 243 VQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD--ATTRMGYTPLHVASH 320 (437)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT--CCCSSCCCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC--CCCCCCCCHHHHHHH
Confidence 2345677777554432 122333333333333333333333322211 112335568888888
Q ss_pred CCCcccccccccCCCCCCCCcc-cccCCCCchHHHHHHHHHHHHHHHHHhhCCccCCCChHHHHhhhhCC-CcccccccC
Q 007619 461 DATNFYTGLSASKSKGSSGNLK-EVDLNETPSMQAKRLQLRLQALLKTVETGRRYFPHCSDVVDKFLDCD-WSDASLLEN 538 (595)
Q Consensus 461 ~~~~e~~~~~~~~~~~~~~~~~-~~~l~e~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~-~~~~~~~~~ 538 (595)
.+..+....+... + .... ....+.||...+-+. | ..+++.-.++.. -++..-...
T Consensus 321 ~g~~~~v~~Ll~~--g--ad~n~~~~~g~t~L~~A~~~-------------g------~~~iv~~Ll~~ga~~~~~~~~g 377 (437)
T 1n11_A 321 YGNIKLVKFLLQH--Q--ADVNAKTKLGYSPLHQAAQQ-------------G------HTDIVTLLLKNGASPNEVSSDG 377 (437)
T ss_dssp SSCSHHHHHHHHT--T--CCTTCCCTTSCCHHHHHHHT-------------T------CHHHHHHHHHTTCCSCCCCSSS
T ss_pred cCcHHHHHHHHhc--C--CCCCCCCCCCCCHHHHHHHC-------------C------hHHHHHHHHHCcCCCCCCCCCC
Confidence 8887776655421 1 1111 112345785543321 1 223343333333 122222233
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHhh
Q 007619 539 GTPEEQRLKRARFMELKEDVQKAFY 563 (595)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (595)
.||-+ ..++..+.++.+.+.....
T Consensus 378 ~t~l~-~A~~~g~~~~~~~l~~~~~ 401 (437)
T 1n11_A 378 TTPLA-IAKRLGYISVTDVLKVVTD 401 (437)
T ss_dssp CCHHH-HHHHTTCHHHHHHHHHHCC
T ss_pred CCHHH-HHHHcCcHHHHHHHHhccc
Confidence 35543 4667778888877766543
No 6
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=4e-29 Score=262.63 Aligned_cols=224 Identities=13% Similarity=0.047 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCC
Q 007619 166 NYAIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELP 241 (595)
Q Consensus 166 ~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~ 241 (595)
.....+|+.|+..+..++++++++.+++++.+ +..+.||||+|+..+. +.|++++++... ..+.|+++.++.
T Consensus 18 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~ 93 (364)
T 3ljn_A 18 DENMEKIHVAARKGQTDEVRRLIETGVSPTIQ--NRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVM 93 (364)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc--CCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHH
Confidence 34678999999999999999999999998876 6788999999999997 566666664332 468899999888
Q ss_pred cchHHHHHHHHhhhcccccccccc--------------cCCCCCCCCcHHHHHHhcC--CHHHHHHHHHCC-CC---CCC
Q 007619 242 DEVSGEIKSLRVKSDEECEANIAE--------------VDPMHAKRVRRIHKALDSD--DVELLKLLLDES-NV---TLD 301 (595)
Q Consensus 242 ~~~l~~ii~lL~~~~~~~Ga~~~~--------------~~~~d~~g~tpLh~A~~~g--~~e~v~~LL~~g-~i---n~~ 301 (595)
... .+++++|+......|++++. .+..+..|.||||+|+..| +.++|++|++.| ++ |..
T Consensus 94 ~g~-~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~ 172 (364)
T 3ljn_A 94 ANK-TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKA 172 (364)
T ss_dssp TTC-HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTT
T ss_pred cCC-HHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCC
Confidence 888 66777775443333666655 1113788999999999999 999999999999 55 478
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCC-----ccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHH
Q 007619 302 DAYALHYAAAYCNPKVFKEVLNMGLAD-----LNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAIC 376 (595)
Q Consensus 302 G~tpLh~Aa~~g~~~~v~~LL~~~~ad-----vn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A 376 (595)
|+||||+|+..|+.+++++||..+ ++ +|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 173 g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A 251 (364)
T 3ljn_A 173 DETPLMRAMEFRNREALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLS 251 (364)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 999999999999999999999998 88 999999999999999999999999999999999999999999999999
Q ss_pred HHcCChhhHHHHHHcCCCc
Q 007619 377 RRMTRRKDYIEATKQGQET 395 (595)
Q Consensus 377 ~~~~~~~~v~~l~~~g~~~ 395 (595)
+..|+.+++++|++.|..+
T Consensus 252 ~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 252 VRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHTCCHHHHHHHHHHSCHH
T ss_pred HHhChHHHHHHHHHcCCch
Confidence 9999999999999998755
No 7
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=4.2e-29 Score=244.68 Aligned_cols=214 Identities=18% Similarity=0.092 Sum_probs=187.3
Q ss_pred HHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchHH
Q 007619 171 LMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVSG 246 (595)
Q Consensus 171 lL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~ 246 (595)
.|+.|+..|..+.++.++......... .+.++.||||+|+..+. +.|++.++++..++..+.|+++.++..+. .
T Consensus 9 ~l~~A~~~g~~~~v~~ll~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~ 86 (231)
T 3aji_A 9 MICNLAYSGKLDELKERILADKSLATR-TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX-D 86 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCGGGGGC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC-H
T ss_pred hHHHHHHhCCHHHHHHHHHhchhhhhc-CCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH-H
Confidence 578888888777777777665443221 15778999999999997 67888888999899999999999888877 6
Q ss_pred HHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHH
Q 007619 247 EIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVL 322 (595)
Q Consensus 247 ~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL 322 (595)
+++++|+ ++|++++.. +..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.++++.|+
T Consensus 87 ~~v~~Ll----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 159 (231)
T 3aji_A 87 EIVKALL----VKGAHVNAV---NQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILL 159 (231)
T ss_dssp HHHHHHH----HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHH----HcCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 6777773 458888776 889999999999999999999999999 54 478999999999999999999999
Q ss_pred HcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCC
Q 007619 323 NMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 394 (595)
Q Consensus 323 ~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~ 394 (595)
..| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|.+.|.+
T Consensus 160 ~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 160 FYK-ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred hcC-CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 998 99999999999999999999999999999999999999999999999999999999999999887653
No 8
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=4.3e-28 Score=260.95 Aligned_cols=296 Identities=18% Similarity=0.136 Sum_probs=211.8
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchH
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l 245 (595)
.+|++|+..+..++++++++.+++.+.. +..+.||||+|+..+. ..|++.+.+....+..+.|+++.++....
T Consensus 82 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~- 158 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLLENNANPNLA--TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGK- 158 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC-
T ss_pred CHHHHHHHCCCHHHHHHHHhCCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCC-
Confidence 4688888888888888888888887665 5667888888888886 46667777777777778888888777777
Q ss_pred HHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHH
Q 007619 246 GEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEV 321 (595)
Q Consensus 246 ~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~L 321 (595)
.+++++|+ ++|++++.. +..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.++++.|
T Consensus 159 ~~~v~~Ll----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 231 (437)
T 1n11_A 159 VRVAELLL----ERDAHPNAA---GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 231 (437)
T ss_dssp HHHHHHHH----HTTCCTTCC---CSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHH----hCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 55666663 457777766 778888888888888888888888888 43 46788888888888888888888
Q ss_pred HHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchhhccc
Q 007619 322 LNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDRLC 401 (595)
Q Consensus 322 L~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~ 401 (595)
+..| +++|..+..|+||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.++++.|++.|..+....
T Consensus 232 l~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-- 308 (437)
T 1n11_A 232 LQYG-GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT-- 308 (437)
T ss_dssp HHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC--
T ss_pred HHcC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCC--
Confidence 8887 8888888888888888888888888888888888888888888888888888888888888888876544221
Q ss_pred HHHHHHHHhccccCCCcccchhhhcchhHHHHHhhhhhhhHHhhcCcchhhHHHhhhccCCCcccccccccCCCCCCCCc
Q 007619 402 IDVLEREMRRNSMSGNLALSSEVMADDFQMKLNYLENRVAFARLLFPSEARVAMHIADADATNFYTGLSASKSKGSSGNL 481 (595)
Q Consensus 402 ~~~le~~~~~~p~~~~~~~~~~~~~~~~~~~l~~le~~v~~~r~l~~~ea~~~~~ia~~~~~~e~~~~~~~~~~~~~~~~ 481 (595)
..|.++++.+...+...+..+++++...+- .....+..++++|...+..+....+.. .+...
T Consensus 309 ------------~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n--~~~~~g~t~L~~A~~~g~~~iv~~Ll~----~ga~~ 370 (437)
T 1n11_A 309 ------------RMGYTPLHVASHYGNIKLVKFLLQHQADVN--AKTKLGYSPLHQAAQQGHTDIVTLLLK----NGASP 370 (437)
T ss_dssp ------------SSCCCHHHHHHHSSCSHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTCHHHHHHHHH----TTCCS
T ss_pred ------------CCCCCHHHHHHHcCcHHHHHHHHhcCCCCC--CCCCCCCCHHHHHHHCChHHHHHHHHH----CcCCC
Confidence 233444444444444444444444432221 112234567777777777776655442 11222
Q ss_pred ccccC-CCCchHHHHH
Q 007619 482 KEVDL-NETPSMQAKR 496 (595)
Q Consensus 482 ~~~~l-~e~p~~~~~~ 496 (595)
...+- +.||...+.+
T Consensus 371 ~~~~~~g~t~l~~A~~ 386 (437)
T 1n11_A 371 NEVSSDGTTPLAIAKR 386 (437)
T ss_dssp CCCCSSSCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHH
Confidence 22222 3588766654
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=247.41 Aligned_cols=212 Identities=17% Similarity=0.076 Sum_probs=188.1
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchH
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l 245 (595)
.+|+.|+..+..++++++++.+.+++.+ +.++.||||+|+..+. +.|++++++++..+..+.|+++.++..+.
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~- 81 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS- 81 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC-
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC-
Confidence 4699999999999999999999998876 6788999999999997 67888999999999999999999988887
Q ss_pred HHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHH
Q 007619 246 GEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEV 321 (595)
Q Consensus 246 ~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~L 321 (595)
.+++++|+ ++|++++. +..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.++++.|
T Consensus 82 ~~~v~~Ll----~~g~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (261)
T 2xai_A 82 WDCVNLLL----QHGASVQP----ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKL 153 (261)
T ss_dssp HHHHHHHH----HTTCCSSC----SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHH----HCCCCCCC----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHH
Confidence 66777773 45777764 456999999999999999999999999 55 47899999999999999999999
Q ss_pred HHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCch
Q 007619 322 LNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (595)
Q Consensus 322 L~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (595)
++.| +++|. +..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ..++..+.+.+..+.
T Consensus 154 l~~g-~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~~~~~~ll~~~~~~~ 224 (261)
T 2xai_A 154 LESG-ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLEREGPPS 224 (261)
T ss_dssp HHHT-CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--CTHHHHHHHC-CCCC
T ss_pred HHcC-CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--ccHHHHHHhccCCcc
Confidence 9998 99995 88999999999999999999999999999999999999999999954 458888888876554
No 10
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=3.3e-29 Score=246.57 Aligned_cols=217 Identities=14% Similarity=0.072 Sum_probs=181.4
Q ss_pred HHHHHHHHcChHHHHHHHHH----cCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCC
Q 007619 170 ELMYASAAFQMKELVLLFQR----RLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELP 241 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~----~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~ 241 (595)
.+|+.|+..+..++++++++ .+.+++.+ +..+.||||+|+.++. +.|++.++++...+..+.++++.++.
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 88 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY--NNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE 88 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc--cccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 57999999999888888776 67777665 5678999999999997 57888888888888899999998888
Q ss_pred cchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CCC----CCCchHHHHHHHcCCHH
Q 007619 242 DEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT----LDDAYALHYAAAYCNPK 316 (595)
Q Consensus 242 ~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~in----~~G~tpLh~Aa~~g~~~ 316 (595)
... .+++++|+......+.+++.. +..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..|+.+
T Consensus 89 ~~~-~~~~~~Ll~~~~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~ 164 (241)
T 1k1a_A 89 HRS-PTCLRALLDSAAPGTLDLEAR---NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLS 164 (241)
T ss_dssp TTC-HHHHHHHHHHSCTTSCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred cCC-HHHHHHHHHcCCCcccccccc---CcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHH
Confidence 777 566666643322112255544 889999999999999999999999999 554 57999999999999999
Q ss_pred HHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCC
Q 007619 317 VFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 393 (595)
Q Consensus 317 ~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~ 393 (595)
+++.|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.+...++
T Consensus 165 ~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 165 MVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 999999997 9999999999999999999999999999999999999999999999999999999999888877653
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=1.4e-28 Score=241.95 Aligned_cols=209 Identities=18% Similarity=0.172 Sum_probs=183.6
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchH
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l 245 (595)
.+|+.|+..+..++++++++.+.+++.. +..+.||||+|+..+. +.|++.++++..++..+.++++.++..+.
T Consensus 13 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~- 89 (237)
T 3b7b_A 13 SPLHAAAEAGHVDICHMLVQAGANIDTC--SEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGH- 89 (237)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTC-
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCcCcc--CCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-
Confidence 5799999999999999999999998776 5778999999999997 57788888888888899999998888777
Q ss_pred HHHHHHHhhhccccc-ccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHH
Q 007619 246 GEIKSLRVKSDEECE-ANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKE 320 (595)
Q Consensus 246 ~~ii~lL~~~~~~~G-a~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~ 320 (595)
.+++++|+ .+| ++++.. +..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.++++.
T Consensus 90 ~~~~~~Ll----~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 162 (237)
T 3b7b_A 90 YEVVQYLL----SNGQMDVNCQ---DDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEI 162 (237)
T ss_dssp HHHHHHHH----TTTCCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHH----hCCCCCcccC---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHH
Confidence 66666664 334 566655 889999999999999999999999999 54 4789999999999999999999
Q ss_pred HHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHH
Q 007619 321 VLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEAT 389 (595)
Q Consensus 321 LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~ 389 (595)
|+..| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+..+.
T Consensus 163 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 163 LLAAK-CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp HHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred HHHcC-CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99998 999999999999999999999999999999999999999999999999999998775544443
No 12
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=2.9e-28 Score=253.32 Aligned_cols=215 Identities=20% Similarity=0.095 Sum_probs=146.4
Q ss_pred HHHHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcc
Q 007619 168 AIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDE 243 (595)
Q Consensus 168 v~elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~ 243 (595)
-..+|+.|+..+..++++++++.|++++.++ ..++.||||+|+.++. +.|+++++++..++..+.++++.+....
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~-~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 3468999999999999999999999987652 3458999999999997 6788888888777777766666554444
Q ss_pred hHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CCC-------------CCCchHHHHH
Q 007619 244 VSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT-------------LDDAYALHYA 309 (595)
Q Consensus 244 ~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~in-------------~~G~tpLh~A 309 (595)
. ..+...+ ...|++++.. |..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|
T Consensus 104 ~-~~~~~~~----~~~~~~~~~~---d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A 175 (337)
T 4g8k_A 104 S-VKLLKLF----LSKGADVNEC---DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 175 (337)
T ss_dssp C-HHHHHHH----HTTTCCTTCB---CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHH
T ss_pred c-chhhHHh----hhccchhhhh---ccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHH
Confidence 4 2222332 2334555554 666777777777777777777777766 332 3466777777
Q ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC----HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhH
Q 007619 310 AAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKE----PAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDY 385 (595)
Q Consensus 310 a~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~----~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v 385 (595)
+..|+.+++++||...|+++|.+|..|+||||.++..+. ..++++|+++|+++|.+|..|+||||+|+..|+.+.+
T Consensus 176 ~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v 255 (337)
T 4g8k_A 176 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLV 255 (337)
T ss_dssp HHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHH
T ss_pred HHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHH
Confidence 777777777777755446666666666666666554432 3456666666666666666666666666666666666
Q ss_pred HHHHHc
Q 007619 386 IEATKQ 391 (595)
Q Consensus 386 ~~l~~~ 391 (595)
..|+..
T Consensus 256 ~~Ll~~ 261 (337)
T 4g8k_A 256 QRLLEQ 261 (337)
T ss_dssp HHHHTS
T ss_pred HHHHHh
Confidence 666553
No 13
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=1.5e-28 Score=247.61 Aligned_cols=203 Identities=16% Similarity=0.104 Sum_probs=164.6
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCC---chhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCc
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLN---FVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPD 242 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~---~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~ 242 (595)
.+|+.|+..+..++++++++.+.+ ++.+ +..+.||||+|+..+. +.|+++++++..++..+.|+++.++..
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 88 (282)
T 1oy3_D 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ--NDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRV 88 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTT
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 579999999999999999999887 4444 5778999999999997 678899999999999999999999988
Q ss_pred chHHHHHHHHhhhccccccccc--------------------------------------------ccCCCCCCCCcHHH
Q 007619 243 EVSGEIKSLRVKSDEECEANIA--------------------------------------------EVDPMHAKRVRRIH 278 (595)
Q Consensus 243 ~~l~~ii~lL~~~~~~~Ga~~~--------------------------------------------~~~~~d~~g~tpLh 278 (595)
.. .+++++|+. +|++.. ..+..+..|.||||
T Consensus 89 ~~-~~~v~~Ll~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 89 RA-HTCACVLLQ----PRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp TC-HHHHHHHSS----SCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred CC-cchhHhhhc----cCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 88 566666643 232210 12334889999999
Q ss_pred HHHhcCCHHHHHHHHHCC-CCC----CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHH
Q 007619 279 KALDSDDVELLKLLLDES-NVT----LDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLV 353 (595)
Q Consensus 279 ~A~~~g~~e~v~~LL~~g-~in----~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~ 353 (595)
+|+..|+.++|++|++.| +++ ..|+||||+|+..|+.+++++||..| +++|.+|..|+||||+|+.+|+.++++
T Consensus 164 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~ 242 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLGSALLRPNPILAR 242 (282)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHHHHHHcCCcHHHH
Confidence 999999999999999999 654 34999999999999999999999997 999999999999999999999999999
Q ss_pred HHHhCCCCccccCCCCCcHHHHHHHcC
Q 007619 354 TLLSKGACASETTSDGQTAVAICRRMT 380 (595)
Q Consensus 354 ~LL~~Gad~n~~d~~G~TpL~~A~~~~ 380 (595)
+|+++||+++.+|..|.|||++|....
T Consensus 243 ~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 243 LLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHTTCCCCCCC--------------
T ss_pred HHHHcCCCcCcCCCcccccccccCCcc
Confidence 999999999999999999999998764
No 14
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=3.8e-29 Score=264.44 Aligned_cols=215 Identities=15% Similarity=0.120 Sum_probs=189.7
Q ss_pred HHHHHHHHcChHHHHHH--------HHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCccccc
Q 007619 170 ELMYASAAFQMKELVLL--------FQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLE 237 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l--------~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~ 237 (595)
.+|++|+..+..+++++ +++.+++++.+ +.++.||||+|+.++. +.|+++++++..++..+.|+++
T Consensus 127 t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~--d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~ 204 (373)
T 2fo1_E 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM--DCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALH 204 (373)
T ss_dssp CHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCC--CCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHH
Confidence 57888988876654444 45889998886 6788999999999997 6788899999999999999999
Q ss_pred ccCCcchHHHHHHHHhhhccccc---ccccccCCCCCCCCcHHHHHHhcC---CHHHHHHHHHCC-CCC-----------
Q 007619 238 KELPDEVSGEIKSLRVKSDEECE---ANIAEVDPMHAKRVRRIHKALDSD---DVELLKLLLDES-NVT----------- 299 (595)
Q Consensus 238 ~al~~~~l~~ii~lL~~~~~~~G---a~~~~~~~~d~~g~tpLh~A~~~g---~~e~v~~LL~~g-~in----------- 299 (595)
.++.... .+++++|+ .+| ++++.. |..|.||||+|+..+ +.+++++|++.| +++
T Consensus 205 ~A~~~g~-~~~v~~Ll----~~~~~~~~~~~~---d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d 276 (373)
T 2fo1_E 205 QAAANRD-FGMMVYML----NSTKLKGDIEEL---DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEK 276 (373)
T ss_dssp HHHHTTC-HHHHHHHT----TSHHHHHTTSCC---CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSS
T ss_pred HHHHCCC-HHHHHHHH----hcCccccChhhc---CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCccc
Confidence 9988887 66677764 334 566666 899999999999998 899999999999 654
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHc
Q 007619 300 LDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRM 379 (595)
Q Consensus 300 ~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~ 379 (595)
..|.||||+|+..|+.+++++||..+++++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+
T Consensus 277 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 277 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp CCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHT
T ss_pred ccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHc
Confidence 38999999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHcCCC
Q 007619 380 TRRKDYIEATKQGQE 394 (595)
Q Consensus 380 ~~~~~v~~l~~~g~~ 394 (595)
|+.+++++|.+.|.+
T Consensus 357 g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 357 NHHNIVDIFDRCRPE 371 (373)
T ss_dssp TCHHHHHHHHTTC--
T ss_pred CCHHHHHHHHhcCcc
Confidence 999999999998863
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=1.3e-28 Score=247.94 Aligned_cols=191 Identities=19% Similarity=0.135 Sum_probs=171.5
Q ss_pred cCCcHHHHHHHHHcCh----HHHHhchhh---ccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCC
Q 007619 200 VEDVIPILVAAFHCQL----NQLRSHCVQ---RVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAK 272 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~~----~~Ll~~~~~---~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~ 272 (595)
+.++.||||+|+.++. +.|++.+.+ +..++..+.|++|.++..+. .+++++|+ ++|++++.. +..
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll----~~ga~~~~~---~~~ 77 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE-ASTVEKLY----AAGAGVLVA---ERG 77 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTC-HHHHHHHH----HTTCCSSCC---CTT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCC-HHHHHHHH----HcCCCCCCC---CCC
Confidence 5778999999999997 567777776 67788899999999998888 67777773 468898877 889
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHCC-C--------------------------------------------------CCCC
Q 007619 273 RVRRIHKALDSDDVELLKLLLDES-N--------------------------------------------------VTLD 301 (595)
Q Consensus 273 g~tpLh~A~~~g~~e~v~~LL~~g-~--------------------------------------------------in~~ 301 (595)
|+||||+|+..|+.+++++|++.| . .+..
T Consensus 78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD 157 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTT
T ss_pred CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCC
Confidence 999999999999999999999976 2 2357
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCccccCCC-CChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcC
Q 007619 302 DAYALHYAAAYCNPKVFKEVLNMGLADLNLKNAR-GHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMT 380 (595)
Q Consensus 302 G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~-G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~ 380 (595)
|.||||+|+..|+.+++++||..| +++|.++.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 158 g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 158 GHTPLHVAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236 (282)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcC
Confidence 999999999999999999999998 999999865 999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHcCCCchhhc
Q 007619 381 RRKDYIEATKQGQETNKDR 399 (595)
Q Consensus 381 ~~~~v~~l~~~g~~~~~~~ 399 (595)
+.+++++|++.|+++....
T Consensus 237 ~~~~v~~Ll~~ga~~~~~~ 255 (282)
T 1oy3_D 237 NPILARLLRAHGAPEPEDG 255 (282)
T ss_dssp CHHHHHHHHHTTCCCCCCC
T ss_pred CcHHHHHHHHcCCCcCcCC
Confidence 9999999999999877443
No 16
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=2.9e-28 Score=248.03 Aligned_cols=218 Identities=15% Similarity=0.053 Sum_probs=173.4
Q ss_pred HHHHHHHHHHcChH-HHHHHHHHc---------CCC-chhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCC
Q 007619 168 AIELMYASAAFQMK-ELVLLFQRR---------LLN-FVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLD 232 (595)
Q Consensus 168 v~elL~~A~~~~l~-~L~~l~~~~---------l~~-~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~ 232 (595)
...++|.|+..|.. ++.++.... ... ...+ +.++.|+||+|+..+. +.|++.+++++.++..+
T Consensus 15 ~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g 92 (285)
T 3d9h_A 15 VPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGD--AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADH 92 (285)
T ss_dssp ---------------------------CCSEECCCCTTCSS--SCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTC
T ss_pred HHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCC--CccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 44678888888774 444432221 111 1222 6778999999999997 57888888999999999
Q ss_pred cccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC--CCCCchHHHHH
Q 007619 233 DVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV--TLDDAYALHYA 309 (595)
Q Consensus 233 ~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i--n~~G~tpLh~A 309 (595)
.|+++.++..+. .+++++|+ ++|++++.. |..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|
T Consensus 93 ~t~L~~A~~~g~-~~~v~~Ll----~~ga~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A 164 (285)
T 3d9h_A 93 VSPLHEACLGGH-LSCVKILL----KHGAQVNGV---TADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEA 164 (285)
T ss_dssp CCHHHHHHHTTC-HHHHHHHH----HTTCCSSCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHH
T ss_pred CCHHHHHHHCCc-HHHHHHHH----HCCCCCCCC---CCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Confidence 999999988887 66777774 458888877 889999999999999999999999999 44 46799999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHH
Q 007619 310 AAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEAT 389 (595)
Q Consensus 310 a~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~ 389 (595)
+..|+.++++.|+..| ++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..++.++++.|+
T Consensus 165 ~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll 242 (285)
T 3d9h_A 165 ARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLM 242 (285)
T ss_dssp HHHTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999998 99999999999999999999999999999999999995 899999999999999999999999
Q ss_pred HcCCCchh
Q 007619 390 KQGQETNK 397 (595)
Q Consensus 390 ~~g~~~~~ 397 (595)
+.|.++..
T Consensus 243 ~~gad~~~ 250 (285)
T 3d9h_A 243 DFGADTQA 250 (285)
T ss_dssp HTTCCTTC
T ss_pred HCCCCCCC
Confidence 99987654
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=1.1e-28 Score=246.14 Aligned_cols=189 Identities=16% Similarity=0.143 Sum_probs=147.9
Q ss_pred cCCcHHHHHHHHHcC-------------h----HHHHhchhhcccc-CCCCcccccccCCcchHHHHHHHHhhhcccccc
Q 007619 200 VEDVIPILVAAFHCQ-------------L----NQLRSHCVQRVVR-SNLDDVCLEKELPDEVSGEIKSLRVKSDEECEA 261 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~-------------~----~~Ll~~~~~~i~~-~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga 261 (595)
+.++.||||+|+..| . +.|++.+.+++.. +..+.|+++.++..+. .+++++|+ ++|+
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll----~~g~ 81 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR-SDAAKRLL----EASA 81 (253)
T ss_dssp ---------------------------------------------CCCTTSCCHHHHHHHTTC-HHHHHHHH----HTTC
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCC-HHHHHHHH----HcCC
Confidence 577899999999876 3 5677888887654 7889999999988887 66777773 4588
Q ss_pred cccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCC
Q 007619 262 NIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES--NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARG 336 (595)
Q Consensus 262 ~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G 336 (595)
+++.. +..|+||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.++++.|+..| +++|.+|..|
T Consensus 82 ~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g 157 (253)
T 1yyh_A 82 DANIQ---DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLG 157 (253)
T ss_dssp CTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CCTTCBCTTS
T ss_pred CCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCCCcCCCC
Confidence 88877 889999999999999999999999998 33 478999999999999999999999998 9999999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 337 HTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 337 ~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|+++..
T Consensus 158 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999987653
No 18
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=2.7e-28 Score=253.08 Aligned_cols=219 Identities=23% Similarity=0.155 Sum_probs=190.1
Q ss_pred HHHHHHHHHHcChHHHH-HHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCc
Q 007619 168 AIELMYASAAFQMKELV-LLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPD 242 (595)
Q Consensus 168 v~elL~~A~~~~l~~L~-~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~ 242 (595)
....|+.|+..|..+.+ .++...+.+.+.+ +..+.||||+|+.++. +.|++.++++..++..+.|++|.++..
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNVNCHAS--DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCS--STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC
Confidence 44566777776666655 4455557776665 5778999999999997 678889999999999999999999888
Q ss_pred chHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CCC----------------------
Q 007619 243 EVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT---------------------- 299 (595)
Q Consensus 243 ~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~in---------------------- 299 (595)
.. .+++++|+ ++|++++.. +..|.||||+|+..|+.+++++|+++| +++
T Consensus 102 g~-~~iv~~Ll----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~ 173 (351)
T 3utm_A 102 GH-YEVTELLL----KHGACVNAM---DLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERL 173 (351)
T ss_dssp TC-HHHHHHHH----HTTCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHH
T ss_pred CC-HHHHHHHH----HCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHH
Confidence 88 67777774 458888877 889999999999999999999999998 432
Q ss_pred -----------------------------------CCCchHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCChHHH
Q 007619 300 -----------------------------------LDDAYALHYAAAY---CNPKVFKEVLNMGLADLNLKNARGHTVLH 341 (595)
Q Consensus 300 -----------------------------------~~G~tpLh~Aa~~---g~~~~v~~LL~~~~advn~~d~~G~TpLh 341 (595)
..|.||||+|+.. +..++++.|+..| +++|.+|..|+||||
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~ 252 (351)
T 3utm_A 174 TYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKDFMTPLH 252 (351)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCCTTCCCHHH
T ss_pred HhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcCCcCCCCCCHHH
Confidence 4578999999999 5578999999998 999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 342 VAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 342 ~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
+|+.+|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++.|+++..
T Consensus 253 ~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 308 (351)
T 3utm_A 253 VAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSI 308 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999997764
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=2.7e-28 Score=244.61 Aligned_cols=187 Identities=17% Similarity=0.100 Sum_probs=169.7
Q ss_pred CcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHH
Q 007619 202 DVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRI 277 (595)
Q Consensus 202 n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpL 277 (595)
++.||||+|+..|. +.|++.+++++.++..+.|++|.++..+. .+++++|+ ++|++++.. |..|.|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll----~~g~~~~~~---~~~g~t~L 73 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGH-LSCVKILL----KHGAQVNGV---TADWHTPL 73 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC-HHHHHHHH----HTTCCTTCC---CTTSCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHH----HCCCCCCCC---CCCCCCHH
Confidence 45799999999997 57888889999999999999999988887 66777773 458888877 88999999
Q ss_pred HHHHhcCCHHHHHHHHHCC-CC--CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 007619 278 HKALDSDDVELLKLLLDES-NV--TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVT 354 (595)
Q Consensus 278 h~A~~~g~~e~v~~LL~~g-~i--n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~ 354 (595)
|+|+..|+.+++++|++.| ++ +.+|.||||+|+..|+.++++.|+..| +++|.+|..|+||||+|+..|+.+++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 152 (261)
T 2xai_A 74 FNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKK 152 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHhCCHHHHHH
Confidence 9999999999999999999 44 477999999999999999999999998 9999999999999999999999999999
Q ss_pred HHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchhh
Q 007619 355 LLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKD 398 (595)
Q Consensus 355 LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~~ 398 (595)
|+++|+++|. +..|+||||+|+..|+.++++.|++.|+++...
T Consensus 153 Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~ 195 (261)
T 2xai_A 153 LLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAK 195 (261)
T ss_dssp HHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 9999999995 899999999999999999999999999876543
No 20
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=1.3e-28 Score=239.89 Aligned_cols=204 Identities=16% Similarity=0.100 Sum_probs=176.3
Q ss_pred HHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchHHHHHHHHhhhcc
Q 007619 182 ELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDE 257 (595)
Q Consensus 182 ~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~ 257 (595)
++++++++.+.+.+... +.++.||||+|+.++. +.|++.++++...+..+.|+++.++.... .+++++|+.
T Consensus 5 ~~i~~Ll~~g~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~--- 79 (223)
T 2f8y_A 5 AVISDFIYQGASLHNQT-DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA-QGVFQILIR--- 79 (223)
T ss_dssp CCEETTEETTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHHH---
T ss_pred HHHHHHHHcCCCccccc-CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-HHHHHHHHH---
Confidence 44555666777765531 4678899999999887 57778888888888889999998887777 566666643
Q ss_pred cccc-cccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 007619 258 ECEA-NIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLK 332 (595)
Q Consensus 258 ~~Ga-~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~ 332 (595)
+|+ +++.. +..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..| +++|.+
T Consensus 80 -~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~ 154 (223)
T 2f8y_A 80 -NRATDLDAR---MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQ 154 (223)
T ss_dssp -BTTSCTTCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred -cCCCCcccC---CCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCc
Confidence 343 55554 889999999999999999999999999 54 478999999999999999999999997 999999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCc
Q 007619 333 NARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 395 (595)
Q Consensus 333 d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~ 395 (595)
|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.++++.|.+.|...
T Consensus 155 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 155 NNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999743
No 21
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=2.8e-28 Score=228.95 Aligned_cols=142 Identities=29% Similarity=0.343 Sum_probs=129.1
Q ss_pred HHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHH
Q 007619 246 GEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEV 321 (595)
Q Consensus 246 ~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~L 321 (595)
.++++.| +++|+++|.. |..|+||||+|+..++.+++++|++.| ++ |..|+||||+|+..|+.++++.|
T Consensus 17 ~~~v~~L----l~~Gadvn~~---d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~L 89 (169)
T 4gpm_A 17 KDRVKDL----IENGADVNAS---DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLL 89 (169)
T ss_dssp HHHHHHH----HHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHH----HHCCCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHH
Confidence 4455555 3468998887 899999999999999999999999999 55 57899999999999999999999
Q ss_pred HHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCc
Q 007619 322 LNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 395 (595)
Q Consensus 322 L~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~ 395 (595)
|+.| +++|.+|.+|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|++.|++.
T Consensus 90 l~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 90 ISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHCc-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 9998 999999999999999999999999999999999999999999999999999999999999999999854
No 22
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=4e-28 Score=245.18 Aligned_cols=191 Identities=18% Similarity=0.064 Sum_probs=146.3
Q ss_pred cCCcHHHHHHHHHcCh----HHHHhchhh--------ccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccC
Q 007619 200 VEDVIPILVAAFHCQL----NQLRSHCVQ--------RVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVD 267 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~~----~~Ll~~~~~--------~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~ 267 (595)
+....++|+.|+..|. +.|++.+.+ +...+..+.++++.+........++.+| +.+|+++|..
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~L----l~~Gadvn~~- 82 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKV----PASGLGVNVT- 82 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC--------------------------------------------CCCCTTCC-
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHH----HHCCCCCCCc-
Confidence 3456899999999998 455555543 2334455678888777666555666666 4669999887
Q ss_pred CCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHH
Q 007619 268 PMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVA 343 (595)
Q Consensus 268 ~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~A 343 (595)
|.+|+||||+|+..|+.++|++|++.| ++ +..|.||||+|+..++.++++.||..| +++|.+|..|+||||+|
T Consensus 83 --d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A 159 (269)
T 4b93_B 83 --SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTPLIYA 159 (269)
T ss_dssp --CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHH
T ss_pred --CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCCCHHHHH
Confidence 889999999999999999999999999 54 578999999999999999999999998 99999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchhh
Q 007619 344 ARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKD 398 (595)
Q Consensus 344 a~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~~ 398 (595)
+..|+.+++++||++|+++|.++..|+||||+|+..|+.+++++|++.|++++..
T Consensus 160 ~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~ 214 (269)
T 4b93_B 160 CSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVL 214 (269)
T ss_dssp HHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred HHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999877643
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=1.3e-27 Score=234.98 Aligned_cols=189 Identities=17% Similarity=0.141 Sum_probs=172.9
Q ss_pred cCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCc
Q 007619 200 VEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVR 275 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~t 275 (595)
+.++.||||+|+..|. +.|++.++++...+..+.|+++.++..+. .+++++|+ ++|++++.. +..|.|
T Consensus 8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll----~~g~~~~~~---~~~g~t 79 (237)
T 3b7b_A 8 HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNH-LEAVKYLI----KAGALVDPK---DAEGST 79 (237)
T ss_dssp SCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC-HHHHHHHH----TTTCCCCCC---CTTSCC
T ss_pred cCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCC-HHHHHHHH----hCCCCCCCC---CCCCCc
Confidence 6788999999999997 57888888988888999999999988887 66777773 558888776 889999
Q ss_pred HHHHHHhcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHH
Q 007619 276 RIHKALDSDDVELLKLLLDES--NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPA 350 (595)
Q Consensus 276 pLh~A~~~g~~e~v~~LL~~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~ 350 (595)
|||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|+..| ++++.++..|.||||+|+..|+.+
T Consensus 80 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~ 158 (237)
T 3b7b_A 80 CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRDNEENICLHWAAFSGCVD 158 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHCCCHH
Confidence 999999999999999999998 33 478999999999999999999999998 999999999999999999999999
Q ss_pred HHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 351 VLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 351 iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
++++|+++|++++.+|..|+||||+|+..++.+++..|++.|.++..
T Consensus 159 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 205 (237)
T 3b7b_A 159 IAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTL 205 (237)
T ss_dssp HHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc
Confidence 99999999999999999999999999999999999999999987654
No 24
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=4.5e-28 Score=246.58 Aligned_cols=210 Identities=17% Similarity=0.091 Sum_probs=187.1
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchH
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l 245 (595)
.+|+.|+..+..++++++++.+.+++.+ +.++.||||+|+..+. +.|++.++++..++..+.|+++.++....
T Consensus 61 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~- 137 (285)
T 3d9h_A 61 SPMHEAAIHGHQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS- 137 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCEE--CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC-
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCH-
Confidence 5799999999999999999999998876 6788999999999997 67888899999999999999999988887
Q ss_pred HHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHH
Q 007619 246 GEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEV 321 (595)
Q Consensus 246 ~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~L 321 (595)
.+++++|+ ++|++++. +..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.++++.|
T Consensus 138 ~~~v~~Ll----~~g~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 209 (285)
T 3d9h_A 138 WDCVNLLL----QHGASVQP----ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKL 209 (285)
T ss_dssp HHHHHHHH----HTTCCSSC----SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHH----HCCCCCCC----CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 66777774 45777764 345999999999999999999999999 54 47899999999999999999999
Q ss_pred HHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHc-CCC
Q 007619 322 LNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQ-GQE 394 (595)
Q Consensus 322 L~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~-g~~ 394 (595)
|+.| +++|. +..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+ ++.+++++|++. |+.
T Consensus 210 l~~g-a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 210 LESG-ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGAS 279 (285)
T ss_dssp HHTT-CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC---
T ss_pred HHCC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccC
Confidence 9997 99995 899999999999999999999999999999999999999999999 567889999887 443
No 25
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=2.1e-27 Score=233.73 Aligned_cols=189 Identities=19% Similarity=0.154 Sum_probs=169.1
Q ss_pred cCCcHHHHHHHHHcChH----HHHh----chhhccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCC
Q 007619 200 VEDVIPILVAAFHCQLN----QLRS----HCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHA 271 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~~~----~Ll~----~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~ 271 (595)
+.++.|+||+|+.+|.. .|++ .+.++...+..+.|+++.++..+. .+++++|+ ++|++++.. +.
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll----~~g~~~~~~---~~ 77 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTL-PSVVRLLV----TAGASPMAL---DR 77 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC-HHHHHHHH----HTTCCTTCC---CT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCC-HHHHHHHH----HcCCCcccc---CC
Confidence 57889999999999973 4444 567778888889999999888887 66777774 458888877 88
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHCC-----CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCChHHHH
Q 007619 272 KRVRRIHKALDSDDVELLKLLLDES-----NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN-ARGHTVLHV 342 (595)
Q Consensus 272 ~g~tpLh~A~~~g~~e~v~~LL~~g-----~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d-~~G~TpLh~ 342 (595)
.|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.++++.|+..| ++++..+ ..|+||||+
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~t~L~~ 156 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRSPLIH 156 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccccccCCCcHHHH
Confidence 9999999999999999999999987 22 468999999999999999999999998 9999999 899999999
Q ss_pred HHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 343 AARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 343 Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|.++..
T Consensus 157 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 211 (241)
T 1k1a_A 157 AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL 211 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999987654
No 26
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=1e-27 Score=234.09 Aligned_cols=201 Identities=15% Similarity=0.063 Sum_probs=148.5
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhch--hhccc-cCCCCcccccccCCc
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHC--VQRVV-RSNLDDVCLEKELPD 242 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~--~~~i~-~~~~~~t~L~~al~~ 242 (595)
..|+.|+..+..++++++++.+.+.+.. .+.++.||||+|+.++. +.|++.+ .++.. .+..+.|+++.++..
T Consensus 4 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 4 YPLHQACMENEFFKVQELLHSKPSLLLQ-KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred cHHHHHHHhCCHHHHHHHHhcCcccccc-CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 3688899999999999998888776542 16778899999999886 4566666 44444 556777777777766
Q ss_pred chHHHHHHHHhhhccccc--ccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHH
Q 007619 243 EVSGEIKSLRVKSDEECE--ANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPK 316 (595)
Q Consensus 243 ~~l~~ii~lL~~~~~~~G--a~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~ 316 (595)
+. .+++++|+ ++| ++++.. +..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+
T Consensus 83 ~~-~~~~~~Ll----~~g~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 83 GN-LEVVKSLY----DRPLKPDLNKI---TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp CC-HHHHHHHH----SSSSCCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CC-HHHHHHHH----hCCCCcccccC---CcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 66 45555553 334 455544 677788888888888888888888877 43 466778888888888888
Q ss_pred HHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH-hCCCCccccCCCCCcHHHHHHHc
Q 007619 317 VFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLL-SKGACASETTSDGQTAVAICRRM 379 (595)
Q Consensus 317 ~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL-~~Gad~n~~d~~G~TpL~~A~~~ 379 (595)
+++.|+..|.+++|.+|..|+||||+|+..|+.+++++|+ ++|++++.+|..|+||||+|+..
T Consensus 155 ~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 155 LIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred HHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 8888877766777878888888888888888888888888 67888888888888888877643
No 27
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1.7e-27 Score=233.49 Aligned_cols=188 Identities=15% Similarity=0.114 Sum_probs=146.6
Q ss_pred HHHHHHHcChHHHHHHHHHc-CCCchhhcccCCcHHHHHHHHHcChHHHHhchhhccccCCCCcccccccCCcchHHHHH
Q 007619 171 LMYASAAFQMKELVLLFQRR-LLNFVEKALVEDVIPILVAAFHCQLNQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIK 249 (595)
Q Consensus 171 lL~~A~~~~l~~L~~l~~~~-l~~~~~k~~~~n~~t~L~~A~~~~~~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii 249 (595)
+|+.|+..+..++++++++. +.+++.+ +.++.||||+|+.++. .+++
T Consensus 6 ~L~~A~~~g~~~~v~~Ll~~~g~~~~~~--~~~g~t~L~~A~~~g~------------------------------~~~v 53 (232)
T 2rfa_A 6 PLLLAAKENDVQALSKLLKFEGCEVHQR--GAMGETALHIAALYDN------------------------------LEAA 53 (232)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCSCTTCC--CTTSCCHHHHHHHTTC------------------------------HHHH
T ss_pred HHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCC------------------------------HHHH
Confidence 45555555555555555544 4444443 3444555555555443 3444
Q ss_pred HHHhhhccccccccccc--CCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CCCC----------------CCchHHHHHH
Q 007619 250 SLRVKSDEECEANIAEV--DPMHAKRVRRIHKALDSDDVELLKLLLDES-NVTL----------------DDAYALHYAA 310 (595)
Q Consensus 250 ~lL~~~~~~~Ga~~~~~--~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~in~----------------~G~tpLh~Aa 310 (595)
++|+ ++|+++... +..|..|.||||+|+..|+.+++++|++.| +++. .|.||||+|+
T Consensus 54 ~~Ll----~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 129 (232)
T 2rfa_A 54 MVLM----EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAA 129 (232)
T ss_dssp HHHH----HHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHH
T ss_pred HHHH----HcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHH
Confidence 4442 234443221 234789999999999999999999999999 5542 6999999999
Q ss_pred HcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHH----HHHHhCCCCc------cccCCCCCcHHHHHHHcC
Q 007619 311 AYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVL----VTLLSKGACA------SETTSDGQTAVAICRRMT 380 (595)
Q Consensus 311 ~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv----~~LL~~Gad~------n~~d~~G~TpL~~A~~~~ 380 (595)
..|+.+++++||+.| +++|.+|..|+||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|+..|
T Consensus 130 ~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 130 CVGSEEIVRLLIEHG-ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp HHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 999999999999997 99999999999999999999999988 9999999998 689999999999999999
Q ss_pred ChhhHHHHHHcCCCc
Q 007619 381 RRKDYIEATKQGQET 395 (595)
Q Consensus 381 ~~~~v~~l~~~g~~~ 395 (595)
+.++++.|+++|..+
T Consensus 209 ~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 209 NIVMFQHLMQKRKHI 223 (232)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHhcCccc
Confidence 999999999998543
No 28
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=3.8e-27 Score=230.94 Aligned_cols=215 Identities=14% Similarity=0.098 Sum_probs=187.5
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccC-CCCcccccccCCcch
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRS-NLDDVCLEKELPDEV 244 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~-~~~~t~L~~al~~~~ 244 (595)
..|+.|+.++..++++++++.+.+++.+ +..+.++||+|+..+. +.|++.+.+..... ..+.++++.++....
T Consensus 11 ~~l~~A~~~g~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 88 (240)
T 3eu9_A 11 WDIVKATQYGIYERCRELVEAGYDVRQP--DKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGH 88 (240)
T ss_dssp CCHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTC
T ss_pred hHHHHHHHcCChHHHHHHHHcCCCcCCC--CCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCC
Confidence 4588899999999999999999998776 5778999999999997 56777777666544 448899998888777
Q ss_pred HHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCC-HHHHH
Q 007619 245 SGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCN-PKVFK 319 (595)
Q Consensus 245 l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~-~~~v~ 319 (595)
.+++++|+ ++|++++.. +..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..++ .++++
T Consensus 89 -~~~v~~Ll----~~g~~~~~~---~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 160 (240)
T 3eu9_A 89 -LSMVVQLM----KYGADPSLI---DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTR 160 (240)
T ss_dssp -HHHHHHHH----HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHH
T ss_pred -HHHHHHHH----HcCCCCccc---CCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHH
Confidence 66667764 458888877 889999999999999999999999999 44 5789999999997776 78888
Q ss_pred HHHHcCCCCccccCC-CCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCc
Q 007619 320 EVLNMGLADLNLKNA-RGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQET 395 (595)
Q Consensus 320 ~LL~~~~advn~~d~-~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~ 395 (595)
.|+..+ ++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|.+.|...
T Consensus 161 ~L~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 161 LLLTFN-VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HHHHTT-CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred HHHhcC-CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 888887 99999997 9999999999999999999999999999999999999999999999999999999998753
No 29
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=3.9e-28 Score=239.17 Aligned_cols=188 Identities=17% Similarity=0.157 Sum_probs=165.8
Q ss_pred cCCcHHHHHHHHHcChH----HHHhchh----hccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCC
Q 007619 200 VEDVIPILVAAFHCQLN----QLRSHCV----QRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHA 271 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~~~----~Ll~~~~----~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~ 271 (595)
+.++.||||+|+.++.. .|++.+. +++..+..+.|+++.++..+. .+++++| +++|++++.. +.
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~L----l~~g~~~~~~---~~ 76 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQ-PEIAEAL----LGAGCDPELR---DF 76 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTC-HHHHHCC----CSCCCCSCCC---CT
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCC-HHHHHHH----HHcCCCCCCc---CC
Confidence 56789999999999973 4444443 567778889999999888877 6677766 5678998887 88
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHCC-C---------CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCC-CCChHH
Q 007619 272 KRVRRIHKALDSDDVELLKLLLDES-N---------VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNA-RGHTVL 340 (595)
Q Consensus 272 ~g~tpLh~A~~~g~~e~v~~LL~~g-~---------in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~-~G~TpL 340 (595)
.|+||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++||..| +++|.++. .|+|||
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~tpL 155 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG-ADVNAQEPCNGRTAL 155 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCHH
Confidence 9999999999999999999999998 2 2467999999999999999999999998 99999998 999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCch
Q 007619 341 HVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (595)
Q Consensus 341 h~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (595)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|+++.
T Consensus 156 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 156 HLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 99999999999999999999999999999999999999999999999999998765
No 30
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=6.8e-28 Score=254.87 Aligned_cols=215 Identities=14% Similarity=0.151 Sum_probs=183.0
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHH--------HhchhhccccCCCCccccc
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQL--------RSHCVQRVVRSNLDDVCLE 237 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~L--------l~~~~~~i~~~~~~~t~L~ 237 (595)
..|+.|+..+. ++++++.....+..+ ...+.|+||+|+..+. +.| ++.+++++.++..+.|+++
T Consensus 96 t~L~~Aa~~~~-~~~~~L~~~~~n~~d---~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~ 171 (373)
T 2fo1_E 96 IKLHTEAAGSY-AITEPITRESVNIID---PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLM 171 (373)
T ss_dssp CHHHHHHHSSS-CCCSCCSTTTTTTCC---CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHH
T ss_pred cHHHHHhcCCc-hHHHHhccccccccC---CcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHH
Confidence 46788887664 455555443333222 3578999999999986 233 4788999999999999999
Q ss_pred ccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC----C---CCCCCchHHHHHH
Q 007619 238 KELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES----N---VTLDDAYALHYAA 310 (595)
Q Consensus 238 ~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g----~---in~~G~tpLh~Aa 310 (595)
.++..+. .+++++|+ ++|++++.. +..|.||||+|+..|+.+++++|++.| + .|..|.||||+|+
T Consensus 172 ~A~~~g~-~~iv~~Ll----~~ga~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 172 LAVLARR-RRLVAYLM----KAGADPTIY---NKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp HHHHHTC-HHHHHHHH----HTTCCSCCC---CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHH
T ss_pred HHHHcCh-HHHHHHHH----HCCCCCccc---CCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHH
Confidence 9998888 67777774 568998877 889999999999999999999999986 3 3588999999999
Q ss_pred HcC---CHHHHHHHHHcCCCCccc--------cCCCCChHHHHHHHcCCHHHHHHHHhCC-CCccccCCCCCcHHHHHHH
Q 007619 311 AYC---NPKVFKEVLNMGLADLNL--------KNARGHTVLHVAARRKEPAVLVTLLSKG-ACASETTSDGQTAVAICRR 378 (595)
Q Consensus 311 ~~g---~~~~v~~LL~~~~advn~--------~d~~G~TpLh~Aa~~~~~~iv~~LL~~G-ad~n~~d~~G~TpL~~A~~ 378 (595)
..+ +.+++++|+..| ++++. .|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+.
T Consensus 244 ~~~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~ 322 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKG-AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ 322 (373)
T ss_dssp HSCSTTHHHHHHHHHHHT-CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCC-CCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHH
Confidence 998 899999999998 99986 6779999999999999999999999875 9999999999999999999
Q ss_pred cCChhhHHHHHHcCCCchh
Q 007619 379 MTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 379 ~~~~~~v~~l~~~g~~~~~ 397 (595)
.|+.+++++|++.|+++..
T Consensus 323 ~g~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 323 EGRIEVVMYLIQQGASVEA 341 (373)
T ss_dssp HTCHHHHHHHHHTTCCSSC
T ss_pred cCCHHHHHHHHHcCCCccC
Confidence 9999999999999987654
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=2.5e-27 Score=241.11 Aligned_cols=207 Identities=10% Similarity=0.015 Sum_probs=178.9
Q ss_pred HcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchHHHHHHHH
Q 007619 177 AFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLR 252 (595)
Q Consensus 177 ~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL 252 (595)
.+...++.+++.+... +.+ +.++.||||+|+..+. +.|++.+++++..+ +.|++|.++..+. .+++++|
T Consensus 9 ~~~~~~v~~lL~~~~~--~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~-~~~v~~L 81 (285)
T 3kea_A 9 TWKSKQLKSFLSSKDT--FKA--DVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLED-TKIVKIL 81 (285)
T ss_dssp GCCHHHHHHHHHSTTT--TCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSS-CHHHHHH
T ss_pred hcCHHHHHHHHHhCCC--Ccc--CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCC-HHHHHHH
Confidence 4566778888877653 333 5778999999999997 67888888888774 8999999998888 5667777
Q ss_pred hhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCC-chHHHHHHHcCCHHHHHHHHHcCCC
Q 007619 253 VKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDD-AYALHYAAAYCNPKVFKEVLNMGLA 327 (595)
Q Consensus 253 ~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G-~tpLh~Aa~~g~~~~v~~LL~~~~a 327 (595)
+ ++|++++.. |..|+||||+|+..|+.+++++|++.| ++ +..| .||||+|+..|+.+++++|+..| +
T Consensus 82 l----~~ga~~~~~---d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g-~ 153 (285)
T 3kea_A 82 L----FSGLDDSQF---DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI-P 153 (285)
T ss_dssp H----HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS-C
T ss_pred H----HCCCCCCCc---CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC-C
Confidence 3 468898877 889999999999999999999999999 54 4677 79999999999999999999998 6
Q ss_pred CccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcH-HHHHHHcCChhhHHHHHHcCCCchhhc
Q 007619 328 DLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTA-VAICRRMTRRKDYIEATKQGQETNKDR 399 (595)
Q Consensus 328 dvn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~Tp-L~~A~~~~~~~~v~~l~~~g~~~~~~~ 399 (595)
++... ..|+||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..|+.++++.|++.|+++....
T Consensus 154 ~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 154 STFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp TTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT
T ss_pred ccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 66322 289999999999999999999999999999999999998 999999999999999999999876543
No 32
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=5.4e-27 Score=224.57 Aligned_cols=182 Identities=18% Similarity=0.117 Sum_probs=151.2
Q ss_pred cHHHHHHHHHcCh----HHHHhchh-hccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHH
Q 007619 203 VIPILVAAFHCQL----NQLRSHCV-QRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRI 277 (595)
Q Consensus 203 ~~t~L~~A~~~~~----~~Ll~~~~-~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpL 277 (595)
..++|+.|+..+. ..|+..+. +++..+..+.|+++.++.... .+++++|+ ++|++++.. +..|.|||
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll----~~g~~~~~~---~~~g~t~l 76 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNND-IEIAKALI----DRGADINLQ---NSISDSPY 76 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTC-HHHHHHHH----HTTCCTTCC---CTTSCCHH
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHH----HcCCCCCCC---CCCCCCHH
Confidence 3566666666665 23333332 555555666666666665555 55666663 458888877 88999999
Q ss_pred HHHHhcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC----
Q 007619 278 HKALDSDDVELLKLLLDES--NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKE---- 348 (595)
Q Consensus 278 h~A~~~g~~e~v~~LL~~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~---- 348 (595)
|+|+..|+.+++++|++.+ ++ |..|.||||+|+..|+.++++.|++.+++++|.+|..|+||||+|+..++
T Consensus 77 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~ 156 (201)
T 3hra_A 77 LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL 156 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHH
T ss_pred HHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhh
Confidence 9999999999999999554 33 57899999999999999999999999889999999999999999999998
Q ss_pred -HHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcC
Q 007619 349 -PAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQG 392 (595)
Q Consensus 349 -~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g 392 (595)
.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|
T Consensus 157 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 157 YQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999999999999999999999999999999999876
No 33
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=8.8e-27 Score=228.11 Aligned_cols=187 Identities=17% Similarity=0.115 Sum_probs=165.1
Q ss_pred CcHHHHHHHHHcChH----HHHhch-hhccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcH
Q 007619 202 DVIPILVAAFHCQLN----QLRSHC-VQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRR 276 (595)
Q Consensus 202 n~~t~L~~A~~~~~~----~Ll~~~-~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tp 276 (595)
...++|+.|+..|.. .|++.. ......+..+.|+++.++..+. .+++++|+ ++|++++.. |..|+||
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll----~~g~~~~~~---~~~g~t~ 76 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGH-TEIVEFLL----QLGVPVNDK---DDAGWSP 76 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTC-HHHHHHHH----HTTCCSCCC---CTTSCCH
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCc-HHHHHHHH----HhCCCCCCc---CCCCCCH
Confidence 346899999999973 444443 3345567889999999988887 66667663 457888776 8899999
Q ss_pred HHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHH
Q 007619 277 IHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVL 352 (595)
Q Consensus 277 Lh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv 352 (595)
||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..| ++++.++..|+||||+|+..|+.+++
T Consensus 77 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v 155 (231)
T 3aji_A 77 LHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKMV 155 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 99999999999999999999 54 578999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 353 VTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 353 ~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
++|+++|++++.+|..|+||||+|+..|+.++++.|++.|.++..
T Consensus 156 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 156 HILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI 200 (231)
T ss_dssp HHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Confidence 999999999999999999999999999999999999999987654
No 34
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=1e-26 Score=227.00 Aligned_cols=188 Identities=18% Similarity=0.109 Sum_probs=164.9
Q ss_pred HHHHHHHHHcCh----HHHHhchhhccc-cCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHH
Q 007619 204 IPILVAAFHCQL----NQLRSHCVQRVV-RSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIH 278 (595)
Q Consensus 204 ~t~L~~A~~~~~----~~Ll~~~~~~i~-~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh 278 (595)
.||||+|+..+. +.|++.+.+.+. .+..+.|+++.++..+. .+++++|+ .+|++++.....+..|+||||
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll----~~~~~~~~~~~~~~~g~t~L~ 77 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQA-HEITSFLL----SKMENVNLDDYPDDSGWTPFH 77 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTC-HHHHHHHH----HTCTTCCGGGCCCTTSCCHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCC-HHHHHHHH----hccccccccccCCCCCCCHHH
Confidence 589999999997 466666666654 77889999999888887 66777774 446455544334899999999
Q ss_pred HHHhcCCHHHHHHHHHCC---CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHH
Q 007619 279 KALDSDDVELLKLLLDES---NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVL 352 (595)
Q Consensus 279 ~A~~~g~~e~v~~LL~~g---~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv 352 (595)
+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++
T Consensus 78 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v 156 (228)
T 2dzn_A 78 IACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-ASVRIKDKFNQIPLHRAASVGSLKLI 156 (228)
T ss_dssp HHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999997 33 478999999999999999999999997 99999999999999999999999999
Q ss_pred HHHHhCC-CCccccCCCCCcHHHHHHHcCChhhHHHHH-HcCCCchh
Q 007619 353 VTLLSKG-ACASETTSDGQTAVAICRRMTRRKDYIEAT-KQGQETNK 397 (595)
Q Consensus 353 ~~LL~~G-ad~n~~d~~G~TpL~~A~~~~~~~~v~~l~-~~g~~~~~ 397 (595)
++|+++| ++++.+|..|+||||+|+..|+.++++.|+ +.|.++..
T Consensus 157 ~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~ 203 (228)
T 2dzn_A 157 ELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL 203 (228)
T ss_dssp HHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC
T ss_pred HHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc
Confidence 9999999 999999999999999999999999999999 88987654
No 35
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=1.1e-27 Score=239.02 Aligned_cols=194 Identities=16% Similarity=0.158 Sum_probs=154.2
Q ss_pred HHHHHHHHHcChHH----HHHHHHHcCCCchh----hcccCCcHHHHHHHHHc---Ch----HHHHhchhhccccCCCCc
Q 007619 169 IELMYASAAFQMKE----LVLLFQRRLLNFVE----KALVEDVIPILVAAFHC---QL----NQLRSHCVQRVVRSNLDD 233 (595)
Q Consensus 169 ~elL~~A~~~~l~~----L~~l~~~~l~~~~~----k~~~~n~~t~L~~A~~~---~~----~~Ll~~~~~~i~~~~~~~ 233 (595)
...|+.|+..+..+ +++++++.+.+++. + +.++.||||+|+.+ +. +.|++.+++....+.
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~--d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~--- 77 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTE--GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP--- 77 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSB--TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC---
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccC--CCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh---
Confidence 35667777776664 66666677777665 3 56677788888776 54 344444444332210
Q ss_pred ccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CCC---CC--------
Q 007619 234 VCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT---LD-------- 301 (595)
Q Consensus 234 t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~in---~~-------- 301 (595)
++ +.... ..|..|.||||+|+..|+.++|++|++.| ++| ..
T Consensus 78 -----------------~~---------~~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~ 130 (256)
T 2etb_A 78 -----------------LV---------NAQCT-DEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQG 130 (256)
T ss_dssp -----------------GG---------GCCCC-STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSS
T ss_pred -----------------hc---------ccccc-cccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccccccc
Confidence 00 11111 12678999999999999999999999999 654 32
Q ss_pred -----CchHHHHHHHcCCHHHHHHHHH---cCCCCccccCCCCChHHHHHHH--cCCHH-------HHHHHHhCCCCc--
Q 007619 302 -----DAYALHYAAAYCNPKVFKEVLN---MGLADLNLKNARGHTVLHVAAR--RKEPA-------VLVTLLSKGACA-- 362 (595)
Q Consensus 302 -----G~tpLh~Aa~~g~~~~v~~LL~---~~~advn~~d~~G~TpLh~Aa~--~~~~~-------iv~~LL~~Gad~-- 362 (595)
|.||||+|+..|+.+++++||+ .| +++|.+|..|+||||+|+. .++.+ ++++|+++|+++
T Consensus 131 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g-a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 209 (256)
T 2etb_A 131 TCFYFGELPLSLAACTKQWDVVTYLLENPHQP-ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCP 209 (256)
T ss_dssp SCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHST
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhccccC-CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccc
Confidence 9999999999999999999999 66 9999999999999999999 88888 999999999999
Q ss_pred -----cccCCCCCcHHHHHHHcCChhhHHHHHHcCCCc
Q 007619 363 -----SETTSDGQTAVAICRRMTRRKDYIEATKQGQET 395 (595)
Q Consensus 363 -----n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~ 395 (595)
+.+|..|+||||+|+..|+.++++.|+++|..+
T Consensus 210 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 210 TVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 999999999999999999999999999998644
No 36
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=1.6e-26 Score=240.08 Aligned_cols=219 Identities=20% Similarity=0.181 Sum_probs=189.2
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchH
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l 245 (595)
..|++|+..+..++++++++++++.+.+ ...+.++++.+...+. ..+...+.++...+..+.|+++.++....
T Consensus 61 TpLh~A~~~g~~~iv~~Ll~~ga~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~- 137 (337)
T 4g8k_A 61 TPLHNAVQMSREDIVELLLRHGADPVLR--KKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK- 137 (337)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTC-
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCchhhh--ccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCc-
Confidence 4799999999999999999999999887 6778899999998886 56777888888999999999999888877
Q ss_pred HHHHHHHhhhcccccccccccC-------CCCCCCCcHHHHHHhcCCHHHHHHHHHC-C-CC---CCCCchHHHHHHHcC
Q 007619 246 GEIKSLRVKSDEECEANIAEVD-------PMHAKRVRRIHKALDSDDVELLKLLLDE-S-NV---TLDDAYALHYAAAYC 313 (595)
Q Consensus 246 ~~ii~lL~~~~~~~Ga~~~~~~-------~~d~~g~tpLh~A~~~g~~e~v~~LL~~-g-~i---n~~G~tpLh~Aa~~g 313 (595)
.++++++. .+|++++..+ ..+..|.||||+|+..|+.++|++||++ | ++ |..|.||||+++..+
T Consensus 138 ~~~~~~ll----~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~ 213 (337)
T 4g8k_A 138 VKALKFLY----KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 213 (337)
T ss_dssp HHHHHHHH----HTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHS
T ss_pred HHHHHHHH----HcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHc
Confidence 55666663 4577777642 2366799999999999999999999964 6 55 478999999988765
Q ss_pred C----HHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh-CCCCccccCCCCCcHHHHHHHcCChhhHHHH
Q 007619 314 N----PKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLS-KGACASETTSDGQTAVAICRRMTRRKDYIEA 388 (595)
Q Consensus 314 ~----~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~-~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l 388 (595)
. ..++++|++.| +++|.+|..|+||||+|+..|+.++++.|+. .|+++|.+|.+|+||||+|++.|+.+++++|
T Consensus 214 ~~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~L 292 (337)
T 4g8k_A 214 DDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 292 (337)
T ss_dssp CTTTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred CcccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4 34677788887 9999999999999999999999999999998 5899999999999999999999999999999
Q ss_pred HHcCCCch
Q 007619 389 TKQGQETN 396 (595)
Q Consensus 389 ~~~g~~~~ 396 (595)
++.|++++
T Consensus 293 l~~GAd~n 300 (337)
T 4g8k_A 293 CKRGASTD 300 (337)
T ss_dssp HTTSCSST
T ss_pred HHCCCCCC
Confidence 99998764
No 37
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=8.6e-27 Score=241.77 Aligned_cols=212 Identities=21% Similarity=0.143 Sum_probs=185.6
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchH
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l 245 (595)
.+|++|+.++..++++++++.+++++.+ +.++.||||+|+..+. +.|+++++++...+..+.|+++.++....
T Consensus 60 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~- 136 (351)
T 3utm_A 60 TPLHLAAGYNRVRIVQLLLQHGADVHAK--DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR- 136 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC-
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCcc--CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC-
Confidence 5799999999999999999999998876 6778999999999997 67888899999999999999999888777
Q ss_pred HHHHHHHhhhcccccccccccC---------------------------------------------------CCCCCCC
Q 007619 246 GEIKSLRVKSDEECEANIAEVD---------------------------------------------------PMHAKRV 274 (595)
Q Consensus 246 ~~ii~lL~~~~~~~Ga~~~~~~---------------------------------------------------~~d~~g~ 274 (595)
.+++++|+ ++|++++..+ ..+..|.
T Consensus 137 ~~~v~~Ll----~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 212 (351)
T 3utm_A 137 VEVCSLLL----SHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHE 212 (351)
T ss_dssp HHHHHHHH----HTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCC
T ss_pred HHHHHHHH----HcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCC
Confidence 66777774 4577776543 1356788
Q ss_pred cHHHHHHhc---CCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 007619 275 RRIHKALDS---DDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (595)
Q Consensus 275 tpLh~A~~~---g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~ 347 (595)
||||+|+.. ++.+++++|++.| ++ |..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|
T Consensus 213 t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~t~L~~A~~~~ 291 (351)
T 3utm_A 213 TALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG-AKMNALDSLGQTALHRAALAG 291 (351)
T ss_dssp CHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred CHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcC
Confidence 999999999 5689999999999 55 578999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCC
Q 007619 348 EPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 393 (595)
Q Consensus 348 ~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~ 393 (595)
+.+++++|+++|++++.+|..|+||+|+| +..+++.+.+.+.
T Consensus 292 ~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~ 333 (351)
T 3utm_A 292 HLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTP 333 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC--
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccc
Confidence 99999999999999999999999999998 4567777766654
No 38
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=1.4e-27 Score=243.28 Aligned_cols=201 Identities=20% Similarity=0.112 Sum_probs=177.4
Q ss_pred HHHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcch
Q 007619 169 IELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEV 244 (595)
Q Consensus 169 ~elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~ 244 (595)
..+|+.|+..|..++++++++.+.+++.. +.++.||||+|+..+. +.|++++++++..+..+.|++|.++..+.
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADINYA--NVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCB--CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 46899999999999999999999998876 6778999999999997 67888899999999999999999888887
Q ss_pred HHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC--C-------------------------
Q 007619 245 SGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES--N------------------------- 297 (595)
Q Consensus 245 l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g--~------------------------- 297 (595)
.+++++|+ ++|++++.. +..|.||||+|+..++.++++.|+... +
T Consensus 119 -~~~v~~Ll----~~g~~~~~~---~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 119 -LDIAEYLI----SQGAHVGAV---NSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp -HHHHHHHH----HTTCCTTCC---CTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred -HHHHHHHH----hCCCCCCCc---CCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 66777773 458888877 889999999999999999998777542 1
Q ss_pred ----CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHH
Q 007619 298 ----VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAV 373 (595)
Q Consensus 298 ----in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL 373 (595)
.+..|.||||+|+..|+.++++.||..| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|||
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l 269 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF 269 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 2357999999999999999999999987 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHcC
Q 007619 374 AICRRMT 380 (595)
Q Consensus 374 ~~A~~~~ 380 (595)
|+|+...
T Consensus 270 ~~A~~~~ 276 (299)
T 1s70_B 270 DVADEDI 276 (299)
T ss_dssp TSCCSGG
T ss_pred HHHHHHH
Confidence 9997643
No 39
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=3.2e-27 Score=240.40 Aligned_cols=207 Identities=12% Similarity=-0.037 Sum_probs=186.7
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchH
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVS 245 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l 245 (595)
.+|++|+..+..++++++++.+++++.+ ++.||||+|+..+. +.|+++++++..++..+.|++|.++....
T Consensus 33 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~- 107 (285)
T 3kea_A 33 SASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGN- 107 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCC-
Confidence 5799999999999999999999998773 57999999999997 68889999999999999999999988887
Q ss_pred HHHHHHHhhhcccccccccccCCCCCCC-CcHHHHHHhcCCHHHHHHHHHCC-CC-CC-CCchHHHHHHHcCCHHHHHHH
Q 007619 246 GEIKSLRVKSDEECEANIAEVDPMHAKR-VRRIHKALDSDDVELLKLLLDES-NV-TL-DDAYALHYAAAYCNPKVFKEV 321 (595)
Q Consensus 246 ~~ii~lL~~~~~~~Ga~~~~~~~~d~~g-~tpLh~A~~~g~~e~v~~LL~~g-~i-n~-~G~tpLh~Aa~~g~~~~v~~L 321 (595)
.+++++|+ ++|++++.. +..| .||||+|+..|+.+++++|++.| ++ +. .|.||||+|+..|+.+++++|
T Consensus 108 ~~~v~~Ll----~~ga~~~~~---~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~L 180 (285)
T 3kea_A 108 MQTVKLFV----KKNWRLMFY---GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILL 180 (285)
T ss_dssp HHHHHHHH----HHCGGGGGC---SSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHH----hcCCCCCcc---CCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHH
Confidence 67777773 458898877 7888 79999999999999999999999 43 43 899999999999999999999
Q ss_pred HHcCCCCccccCCCCChH-HHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCch
Q 007619 322 LNMGLADLNLKNARGHTV-LHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (595)
Q Consensus 322 L~~~~advn~~d~~G~Tp-Lh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (595)
+..| +++|.+|..|+|| ||+|+..|+.+++++|+++|++++..|. .|+..|+.+++++|++.|.++.
T Consensus 181 l~~g-ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~ 248 (285)
T 3kea_A 181 LDYM-TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEYK 248 (285)
T ss_dssp HHHH-HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHT
T ss_pred HHcC-CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCC
Confidence 9998 9999999999998 9999999999999999999999999883 5677899999999999986543
No 40
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=5.6e-27 Score=246.24 Aligned_cols=187 Identities=12% Similarity=0.104 Sum_probs=168.9
Q ss_pred cCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCc
Q 007619 200 VEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVR 275 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~t 275 (595)
+.++.|+||+|+..|. +.|++.+++++.++..+.|+++.++.... .+++++|+ ++|++++ +..|.|
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll----~~g~~~~-----~~~g~t 86 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGC-VDTAKYLA----SVGEVHS-----LWHGQK 86 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCC-HHHHHHHH----HHCCCCC-----CBTTBC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCC-HHHHHHHH----HCCCCcc-----ccCCCC
Confidence 5678999999999997 67888899999999999999999998888 67777774 4466443 457999
Q ss_pred HHHHHHhcCCHHHHHHHHHC----C-C--------------------CCCCCchHHHHHHHcC--CHHHHHHHHHcCCCC
Q 007619 276 RIHKALDSDDVELLKLLLDE----S-N--------------------VTLDDAYALHYAAAYC--NPKVFKEVLNMGLAD 328 (595)
Q Consensus 276 pLh~A~~~g~~e~v~~LL~~----g-~--------------------in~~G~tpLh~Aa~~g--~~~~v~~LL~~~~ad 328 (595)
|||+|+..|+.++|++|++. | + .|..|.||||+|+..| +.+++++||..| ++
T Consensus 87 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g-a~ 165 (364)
T 3ljn_A 87 PIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG-AS 165 (364)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT-CC
T ss_pred HHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC-CC
Confidence 99999999999999999998 5 2 3457999999999999 999999999997 99
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHHhCCCC-----ccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 329 LNLKNARGHTVLHVAARRKEPAVLVTLLSKGAC-----ASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 329 vn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad-----~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
+|.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++.|.+++.
T Consensus 166 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~ 239 (364)
T 3ljn_A 166 PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM 239 (364)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTC
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999 999999999999999999999999999999987654
No 41
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=1.6e-26 Score=235.24 Aligned_cols=189 Identities=17% Similarity=0.127 Sum_probs=168.8
Q ss_pred CCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcH
Q 007619 201 EDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRR 276 (595)
Q Consensus 201 ~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tp 276 (595)
.++.++|+.|+..|. +.|++.+++++..+..+.|++|.++..+. .+++++|+ ++|++++.. |..|+||
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll----~~ga~~~~~---~~~g~tp 109 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDN-VDMVKFLV----ENGANINQP---DNEGWIP 109 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTC-HHHHHHHH----HTTCCTTCC---CTTSCCH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC-HHHHHHHH----HCCCCCCCC---CCCCCcH
Confidence 456899999999997 57888899999999999999999988887 66777773 468898877 8899999
Q ss_pred HHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccc---------------------
Q 007619 277 IHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNL--------------------- 331 (595)
Q Consensus 277 Lh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~--------------------- 331 (595)
||+|+..|+.++|++|+++| ++ |..|.||||+|+..++.+++..++...+++++.
T Consensus 110 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (299)
T 1s70_B 110 LHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH 189 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccC
Confidence 99999999999999999999 44 578999999999999999999888765566553
Q ss_pred -----cCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 332 -----KNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 332 -----~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
.+..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++++.|++.|.++..
T Consensus 190 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA 260 (299)
T ss_dssp CCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 567899999999999999999999999999999999999999999999999999999999987654
No 42
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=7.4e-27 Score=235.30 Aligned_cols=191 Identities=17% Similarity=0.170 Sum_probs=149.5
Q ss_pred cCCcHHHHHHHHHcCh----HHHHhch----hhcc----ccCCCCcccccccCCc---chHHHHHHHHhhhccccccccc
Q 007619 200 VEDVIPILVAAFHCQL----NQLRSHC----VQRV----VRSNLDDVCLEKELPD---EVSGEIKSLRVKSDEECEANIA 264 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~~----~~Ll~~~----~~~i----~~~~~~~t~L~~al~~---~~l~~ii~lL~~~~~~~Ga~~~ 264 (595)
+..+.++||.|+..|. +.|++.+ .++. ..+..+.|++|.++.. +. .+++++|+ ++|++++
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~-~~~v~~Ll----~~ga~~~ 84 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQ-NDTIALLL----DVARKTD 84 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTB-CHHHHHHH----HHHHHTT
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCC-hHHHHHHH----Hhhcccc
Confidence 4667788888888776 2344432 2222 2355677777776643 34 45555553 2344322
Q ss_pred -------c-cCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CCC---C--------------CCchHHHHHHHcCCHHHH
Q 007619 265 -------E-VDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT---L--------------DDAYALHYAAAYCNPKVF 318 (595)
Q Consensus 265 -------~-~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~in---~--------------~G~tpLh~Aa~~g~~~~v 318 (595)
. ....|..|.||||+|+..|+.++|++|++.| +++ . .|.||||+|+..|+.+++
T Consensus 85 ~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 164 (273)
T 2pnn_A 85 SLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV 164 (273)
T ss_dssp CHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHH
T ss_pred chhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 1 1113678999999999999999999999999 654 3 699999999999999999
Q ss_pred HHHHH---cCCCCccccCCCCChHHHHHHHcCC---------HHHHHHHHhCCCCcc-------ccCCCCCcHHHHHHHc
Q 007619 319 KEVLN---MGLADLNLKNARGHTVLHVAARRKE---------PAVLVTLLSKGACAS-------ETTSDGQTAVAICRRM 379 (595)
Q Consensus 319 ~~LL~---~~~advn~~d~~G~TpLh~Aa~~~~---------~~iv~~LL~~Gad~n-------~~d~~G~TpL~~A~~~ 379 (595)
++||+ .| +++|.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+..
T Consensus 165 ~~Ll~~~~~g-ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 165 KFLLQNSWQP-ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp HHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHHHhcccCC-CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 99999 66 9999999999999999999988 899999999999997 4899999999999999
Q ss_pred CChhhHHHHHHcCC-Cch
Q 007619 380 TRRKDYIEATKQGQ-ETN 396 (595)
Q Consensus 380 ~~~~~v~~l~~~g~-~~~ 396 (595)
|+.+++++|++.|+ +|.
T Consensus 244 g~~~iv~~Ll~~ga~dp~ 261 (273)
T 2pnn_A 244 GKIGVLAYILQREIHEPE 261 (273)
T ss_dssp TCHHHHHHHHHHHTC---
T ss_pred ChHHHHHHHHHCCCCCch
Confidence 99999999999998 443
No 43
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=9.7e-26 Score=219.43 Aligned_cols=173 Identities=16% Similarity=0.162 Sum_probs=155.5
Q ss_pred HHHHhchhhcccc-CCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHH
Q 007619 216 NQLRSHCVQRVVR-SNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLD 294 (595)
Q Consensus 216 ~~Ll~~~~~~i~~-~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~ 294 (595)
+.|++.+.++... +..+.|+++.++..+. .+++++|+ ++|++++.. +..|.||||+|+..|+.+++++|++
T Consensus 8 ~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 8 SDFIYQGASLHNQTDRTGETALHLAARYSR-SDAAKRLL----EASADANIQ---DNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ETTEETTCCTTCCCTTTCCCHHHHHHHTTC-HHHHHHHH----HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHcCCCcccccCCCCCchHHHHHHcCC-HHHHHHHH----HcCCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3567777777665 6789999999988888 56666663 458888876 8899999999999999999999999
Q ss_pred CC--CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCC
Q 007619 295 ES--NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDG 369 (595)
Q Consensus 295 ~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G 369 (595)
.| ++ +..|.||||+|+..|+.++++.|+..+ ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 80 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 158 (223)
T 2f8y_A 80 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 158 (223)
T ss_dssp BTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred cCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 98 33 478999999999999999999999988 9999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 370 QTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 370 ~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
+||||+|+..|+.++++.|++.|.++..
T Consensus 159 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 159 ETPLFLAAREGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 9999999999999999999999987654
No 44
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=3.4e-26 Score=228.40 Aligned_cols=196 Identities=14% Similarity=0.169 Sum_probs=151.0
Q ss_pred HHHHHHHHHcChHH----HHHHHHHcCCCchhhcc--cCCcHHHHHHHH---HcCh----HHHHhchhhccccCCCCccc
Q 007619 169 IELMYASAAFQMKE----LVLLFQRRLLNFVEKAL--VEDVIPILVAAF---HCQL----NQLRSHCVQRVVRSNLDDVC 235 (595)
Q Consensus 169 ~elL~~A~~~~l~~----L~~l~~~~l~~~~~k~~--~~n~~t~L~~A~---~~~~----~~Ll~~~~~~i~~~~~~~t~ 235 (595)
...|+.|+..|..+ +++++.+.+.+++.++. +.++.||||+|+ ..+. +.|++.+++....
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~------- 78 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM------- 78 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH-------
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch-------
Confidence 45666666666555 45555557766665421 155777777777 3344 3444444332111
Q ss_pred ccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CCC---------------
Q 007619 236 LEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT--------------- 299 (595)
Q Consensus 236 L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~in--------------- 299 (595)
. .+. ..+++. .|..|+||||+|+..|+.++|++|++.| +++
T Consensus 79 ----------~---~~~-------~~~~~~---~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~ 135 (260)
T 3jxi_A 79 ----------R---EFI-------NSPFRD---VYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGG 135 (260)
T ss_dssp ----------H---HHH-------TCCBCC---SSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCC
T ss_pred ----------H---hhh-------cccccc---cccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccc
Confidence 0 011 012222 2679999999999999999999999999 654
Q ss_pred --CCCchHHHHHHHcCCHHHHHHHHH---cCCCCccccCCCCChHHHHHHHcCC---------HHHHHHHHhCCCCc---
Q 007619 300 --LDDAYALHYAAAYCNPKVFKEVLN---MGLADLNLKNARGHTVLHVAARRKE---------PAVLVTLLSKGACA--- 362 (595)
Q Consensus 300 --~~G~tpLh~Aa~~g~~~~v~~LL~---~~~advn~~d~~G~TpLh~Aa~~~~---------~~iv~~LL~~Gad~--- 362 (595)
..|+||||+|+..|+.+++++||. .| +++|.+|..|+||||+|+..++ .+++++|+++|+++
T Consensus 136 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~ 214 (260)
T 3jxi_A 136 YFYFGELPLSLAACTNQPHIVHYLTENGHKQ-ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPD 214 (260)
T ss_dssp SCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhccccC-CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccc
Confidence 359999999999999999999999 66 9999999999999999999887 79999999999999
Q ss_pred ----cccCCCCCcHHHHHHHcCChhhHHHHHHcCCCc
Q 007619 363 ----SETTSDGQTAVAICRRMTRRKDYIEATKQGQET 395 (595)
Q Consensus 363 ----n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~ 395 (595)
+.+|..|+||||+|+..|+.++++.|+++|..+
T Consensus 215 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 215 TNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 779999999999999999999999999998644
No 45
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.93 E-value=1.1e-25 Score=211.28 Aligned_cols=155 Identities=21% Similarity=0.210 Sum_probs=130.4
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcChHHHHhchhhccccCCCCcccccccCCcchHHHHH
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIK 249 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii 249 (595)
+-|..|+..|..++++++++.|++++.+ +.++.|||++|+..+...+ +
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~--d~~g~t~l~~a~~~~~~~~------------------------------~ 53 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNAS--DSDGRTPLHHAAENGHKEV------------------------------V 53 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHH------------------------------H
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHH------------------------------H
Confidence 4566788888889999999999998876 6778899999988765332 3
Q ss_pred HHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcC
Q 007619 250 SLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMG 325 (595)
Q Consensus 250 ~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~ 325 (595)
+++ +.+|++++.. |..|+||||+|+..|+.++|++||+.| ++ |.+|+||||+|+..|+.++++.||..|
T Consensus 54 ~~l----l~~gad~~~~---d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g 126 (169)
T 4gpm_A 54 KLL----ISKGADVNAK---DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG 126 (169)
T ss_dssp HHH----HHTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHH----Hhcccchhhh---ccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 333 2357788776 889999999999999999999999999 65 478999999999999999999999998
Q ss_pred CCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccc
Q 007619 326 LADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASE 364 (595)
Q Consensus 326 ~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~ 364 (595)
++++.+|.+|+||||+|+.+|+.+++++|+++||++.-
T Consensus 127 -ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 127 -ADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp -CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred -CCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999999999999999999864
No 46
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=4.7e-25 Score=216.08 Aligned_cols=133 Identities=19% Similarity=0.179 Sum_probs=123.2
Q ss_pred cccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC--------CCCCchHHHHHHHcCCHHHHHHHHHcCCCCcc
Q 007619 260 EANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV--------TLDDAYALHYAAAYCNPKVFKEVLNMGLADLN 330 (595)
Q Consensus 260 Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i--------n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn 330 (595)
|++++.. |..|+||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|++.| ++++
T Consensus 27 g~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~ 102 (232)
T 2rfa_A 27 GCEVHQR---GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARG-ASVS 102 (232)
T ss_dssp CSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTT
T ss_pred CCCcccC---CCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCC-CCCC
Confidence 6677776 889999999999999999999999998 43 358999999999999999999999997 9999
Q ss_pred ccCC-------------CCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhH----HHHHHcCC
Q 007619 331 LKNA-------------RGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDY----IEATKQGQ 393 (595)
Q Consensus 331 ~~d~-------------~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v----~~l~~~g~ 393 (595)
.++. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++ +.|++.|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~ 182 (232)
T 2rfa_A 103 ARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDG 182 (232)
T ss_dssp CCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTC
T ss_pred cccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 9876 799999999999999999999999999999999999999999999999888 99999998
Q ss_pred Cch
Q 007619 394 ETN 396 (595)
Q Consensus 394 ~~~ 396 (595)
.+.
T Consensus 183 ~~~ 185 (232)
T 2rfa_A 183 GDH 185 (232)
T ss_dssp SCS
T ss_pred chh
Confidence 654
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=1.7e-25 Score=213.24 Aligned_cols=131 Identities=21% Similarity=0.230 Sum_probs=122.6
Q ss_pred ccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Q 007619 259 CEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNA 334 (595)
Q Consensus 259 ~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~ 334 (595)
+|++++.. +..|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..| +++|.+|.
T Consensus 57 ~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~ 132 (192)
T 2rfm_A 57 NFDKLEDK---DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG-ANVNDRNL 132 (192)
T ss_dssp HHCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCT
T ss_pred hccccccc---cccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCC
Confidence 35666665 788999999999999999999999999 54 578999999999999999999999998 99999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCC
Q 007619 335 RGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 393 (595)
Q Consensus 335 ~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~ 393 (595)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|.+.|+
T Consensus 133 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 191 (192)
T 2rfm_A 133 EGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191 (192)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999998763
No 48
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=5.8e-25 Score=215.33 Aligned_cols=217 Identities=13% Similarity=0.082 Sum_probs=180.3
Q ss_pred cCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCc
Q 007619 200 VEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVR 275 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~t 275 (595)
++.+.++|+.|+.++. +.|++.+.++...+..+.++++.++..+. .+++++|+ ++|++++.. .+..|.|
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll----~~~~~~~~~--~~~~~~t 78 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNR-IDLVKYYI----SKGAIVDQL--GGDLNST 78 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC-HHHHHHHH----HTTCCTTCC--BTTTTBC
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCC-HHHHHHHH----HcCCcchhh--cCCcCCC
Confidence 4566889999999997 67888888988888999999999888887 56666663 446676655 2566999
Q ss_pred HHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC-HH
Q 007619 276 RIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKE-PA 350 (595)
Q Consensus 276 pLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~-~~ 350 (595)
|||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.++++.|+..+ ++++.++..|.||||+|+..++ .+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHH
Confidence 999999999999999999999 44 578999999999999999999999998 9999999999999999997766 89
Q ss_pred HHHHHHhCCCCccccCC-CCCcHHHHHHHcCChhhHHHHHHcCCCchhhcccHHHHHHHHhccccCCCcccchhhhcchh
Q 007619 351 VLVTLLSKGACASETTS-DGQTAVAICRRMTRRKDYIEATKQGQETNKDRLCIDVLEREMRRNSMSGNLALSSEVMADDF 429 (595)
Q Consensus 351 iv~~LL~~Gad~n~~d~-~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~~~~~~~~le~~~~~~p~~~~~~~~~~~~~~~~ 429 (595)
++++|++.|++++..+. .|.||||+|+..|+.++++.|++.|.++.... ..|.+++.++...+..
T Consensus 158 ~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--------------~~g~t~l~~A~~~~~~ 223 (240)
T 3eu9_A 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQN--------------IKGESALDLAKQRKNV 223 (240)
T ss_dssp THHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBC--------------TTSCBHHHHHHHTTCH
T ss_pred HHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC--------------CCCCCHHHHHHHcCcH
Confidence 99999999999999997 99999999999999999999999998765433 2344455555555444
Q ss_pred HHHHHhhhh
Q 007619 430 QMKLNYLEN 438 (595)
Q Consensus 430 ~~~l~~le~ 438 (595)
.+..+++++
T Consensus 224 ~~v~~L~~~ 232 (240)
T 3eu9_A 224 WMINHLQEA 232 (240)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 444444443
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=6.3e-26 Score=226.09 Aligned_cols=137 Identities=20% Similarity=0.146 Sum_probs=122.4
Q ss_pred cccccccccC-CCCCCCCcHHHHHHhc---CCHHHHHHHHHCC-CCC--------------CCCchHHHHHHHcCCHHHH
Q 007619 258 ECEANIAEVD-PMHAKRVRRIHKALDS---DDVELLKLLLDES-NVT--------------LDDAYALHYAAAYCNPKVF 318 (595)
Q Consensus 258 ~~Ga~~~~~~-~~d~~g~tpLh~A~~~---g~~e~v~~LL~~g-~in--------------~~G~tpLh~Aa~~g~~~~v 318 (595)
.+|++++... ..|..|+||||+|+.. |+.++|++|++.| +++ ..|.||||+|+..|+.+++
T Consensus 27 ~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v 106 (256)
T 2etb_A 27 WNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCV 106 (256)
T ss_dssp HHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHH
T ss_pred HcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHH
Confidence 3467777611 0288999999999999 9999999999998 332 5799999999999999999
Q ss_pred HHHHHcCCCCccccCCC-------------CChHHHHHHHcCCHHHHHHHHh---CCCCccccCCCCCcHHHHHHH--cC
Q 007619 319 KEVLNMGLADLNLKNAR-------------GHTVLHVAARRKEPAVLVTLLS---KGACASETTSDGQTAVAICRR--MT 380 (595)
Q Consensus 319 ~~LL~~~~advn~~d~~-------------G~TpLh~Aa~~~~~~iv~~LL~---~Gad~n~~d~~G~TpL~~A~~--~~ 380 (595)
+.||+.| +++|.++.. |+||||+|+..|+.+++++|++ +|+++|.+|..|+||||+|+. .+
T Consensus 107 ~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~ 185 (256)
T 2etb_A 107 KLLVENG-ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADN 185 (256)
T ss_dssp HHHHHTT-CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCS
T ss_pred HHHHHcC-CCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccC
Confidence 9999997 999999987 9999999999999999999999 999999999999999999999 77
Q ss_pred Chh-------hHHHHHHcCCCc
Q 007619 381 RRK-------DYIEATKQGQET 395 (595)
Q Consensus 381 ~~~-------~v~~l~~~g~~~ 395 (595)
+.+ +++.|++.|+++
T Consensus 186 ~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 186 SPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHcCCCc
Confidence 777 899999988755
No 50
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=7.2e-25 Score=204.70 Aligned_cols=131 Identities=24% Similarity=0.273 Sum_probs=122.7
Q ss_pred cccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccC
Q 007619 258 ECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN 333 (595)
Q Consensus 258 ~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d 333 (595)
++|++++.. |..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..| ++++.+|
T Consensus 35 ~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~ 110 (169)
T 2y1l_E 35 ANGADVNAE---DASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNG-ADVNAND 110 (169)
T ss_dssp HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred HCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCC
Confidence 346777766 889999999999999999999999999 54 578999999999999999999999998 9999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcC
Q 007619 334 ARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQG 392 (595)
Q Consensus 334 ~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g 392 (595)
..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++++.|.+.|
T Consensus 111 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 111 MEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999876
No 51
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=8.3e-25 Score=203.45 Aligned_cols=154 Identities=17% Similarity=0.163 Sum_probs=132.8
Q ss_pred CcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHH
Q 007619 232 DDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALH 307 (595)
Q Consensus 232 ~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh 307 (595)
+.|++|.++..+. .++++.++ +.|++++.. |..|.||||+|+..|+.+++++|++.| ++ |..|.||||
T Consensus 3 ~~t~L~~A~~~g~-~~~v~~ll----~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 74 (167)
T 3v31_A 3 NSLSVHQLAAQGE-MLYLATRI----EQENVINHT---DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALS 74 (167)
T ss_dssp TCCCHHHHHHTTC-HHHHHHHH----HHSSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CcchHHHHHHCCC-HHHHHHHH----HcCCCcCCC---CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 3445555544444 33333332 235566655 889999999999999999999999999 54 578999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHH
Q 007619 308 YAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIE 387 (595)
Q Consensus 308 ~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~ 387 (595)
+|+..|+.+++++|+..| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.
T Consensus 75 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (167)
T 3v31_A 75 LACSKGYTDIVKMLLDCG-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQV 153 (167)
T ss_dssp HHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 999999999999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCC
Q 007619 388 ATKQGQE 394 (595)
Q Consensus 388 l~~~g~~ 394 (595)
+.+.+..
T Consensus 154 L~~~~~~ 160 (167)
T 3v31_A 154 IESHLLK 160 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988653
No 52
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=6.3e-25 Score=202.85 Aligned_cols=131 Identities=20% Similarity=0.212 Sum_probs=121.5
Q ss_pred ccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Q 007619 259 CEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNA 334 (595)
Q Consensus 259 ~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~ 334 (595)
+|++++.. +..|.||||+|+. |+.+++++|++.| ++ |..|+||||+|+..|+.++++.|+..| +++|.+|.
T Consensus 27 ~~~~~~~~---~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~ 101 (162)
T 1ihb_A 27 NNVNVNAQ---NGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ-ADVNIEDN 101 (162)
T ss_dssp SCCCTTCC---CTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCT
T ss_pred CCCCcccc---CccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCC
Confidence 46677666 8899999999999 9999999999999 54 478999999999999999999999998 99999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCCCcHHHHHHHcCChhhHHHHHHcCCC
Q 007619 335 RGHTVLHVAARRKEPAVLVTLLSKGAC-ASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 394 (595)
Q Consensus 335 ~G~TpLh~Aa~~~~~~iv~~LL~~Gad-~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~ 394 (595)
.|+||||+|+..|+.+++++|+++|++ ++.++..|+||||+|+..|+.++++.|++.|++
T Consensus 102 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 102 EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999999999999998 699999999999999999999999999999873
No 53
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=2.2e-25 Score=225.79 Aligned_cols=167 Identities=16% Similarity=0.142 Sum_probs=144.4
Q ss_pred HHHhchhh--ccccCCCCcccccccCCcchHHHHHHHHhhhcccccc-cccccCCCCCCCCcHHHHHH-----hcCCHHH
Q 007619 217 QLRSHCVQ--RVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEA-NIAEVDPMHAKRVRRIHKAL-----DSDDVEL 288 (595)
Q Consensus 217 ~Ll~~~~~--~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga-~~~~~~~~d~~g~tpLh~A~-----~~g~~e~ 288 (595)
.++..+.+ ++.++..+.|+++.++..+. .+++++|+ ++|+ +++.. +..|.||||+|+ ..++.++
T Consensus 94 ~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~-~~~v~~Ll----~~g~~~~~~~---~~~g~tpL~~a~~~~~~~~~~~~~ 165 (276)
T 4hbd_A 94 AMSARLLDYVVNIADSNGNTALHYSVSHAN-FPVVQQLL----DSGVCKVDKQ---NRAGYSPIMLTALATLKTQDDIET 165 (276)
T ss_dssp HHCHHHHHHHHTCCCTTSCCHHHHHHHTTC-HHHHHHHH----HTSCCCTTCC---CTTSCCHHHHGGGCCCCSHHHHHH
T ss_pred HHHHHHHhhcCcCCCCCCCCHHHHHHHCCC-HHHHHHHH----HCCCCcCCCC---CCCCCCHHHHHHHHHhhhhhhHHH
Confidence 34444444 55667778888887777777 55666663 4466 66665 899999999999 6789999
Q ss_pred HHHHHHCC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHh-CCCCcc
Q 007619 289 LKLLLDES-N---VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLS-KGACAS 363 (595)
Q Consensus 289 v~~LL~~g-~---in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~-~Gad~n 363 (595)
+++|++.| . .+..|+||||+|+..|+.++++.||..| +++|.+|..|+||||+|+..|+.+++++|++ .|++++
T Consensus 166 v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~ 244 (276)
T 4hbd_A 166 VLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACE-ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDIS 244 (276)
T ss_dssp HHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTT
T ss_pred HHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCc
Confidence 99999999 3 3467999999999999999999999998 9999999999999999999999999999999 899999
Q ss_pred ccCCCCCcHHHHHHHcCChhhHHHHHHcC
Q 007619 364 ETTSDGQTAVAICRRMTRRKDYIEATKQG 392 (595)
Q Consensus 364 ~~d~~G~TpL~~A~~~~~~~~v~~l~~~g 392 (595)
.+|..|+||||+|+..|+.++++.|++.+
T Consensus 245 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 245 LTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999999999999999999999999875
No 54
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.92 E-value=1.3e-25 Score=221.07 Aligned_cols=165 Identities=18% Similarity=0.167 Sum_probs=138.4
Q ss_pred cCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCc
Q 007619 228 RSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDA 303 (595)
Q Consensus 228 ~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~ 303 (595)
.+..+.|++|.++..+. .++++.|+......|++++.. +..|.||||+|+..|+.+++++|++.| ++ |..|+
T Consensus 4 ~d~~g~t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 79 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEE-KALTMEVIRQVKGDLAFLNFQ---NNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGN 79 (236)
T ss_dssp ---CCCCTTHHHHHTTC-SSSSSCCCC-----CCCCCCC---CTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCC
T ss_pred CCCCCCchhHHHHHcCC-hhHHHHHHHHhhccHHHhhcc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 45678899998877666 333444433323334466655 889999999999999999999999999 54 47899
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCC------ccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCC-CCCcHHHHH
Q 007619 304 YALHYAAAYCNPKVFKEVLNMGLAD------LNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTS-DGQTAVAIC 376 (595)
Q Consensus 304 tpLh~Aa~~g~~~~v~~LL~~~~ad------vn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~-~G~TpL~~A 376 (595)
||||+|+..|+.++++.|+..+ ++ ++..+..|+||||+|+..|+.+++++|+++|++++.++. .|+||||+|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A 158 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSC-TTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLA 158 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHST-TTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcc-cchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999997 54 688899999999999999999999999999999999998 999999999
Q ss_pred HHcCChhhHHHHHHcCCCchh
Q 007619 377 RRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 377 ~~~~~~~~v~~l~~~g~~~~~ 397 (595)
+..|+.+++++|++.|.++..
T Consensus 159 ~~~~~~~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 159 VDLQNPDLVSLLLKCGADVNR 179 (236)
T ss_dssp HHTTCHHHHHHHHTTTCCSCC
T ss_pred HHcCCHHHHHHHHHcCCCCCc
Confidence 999999999999999987654
No 55
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=4.4e-25 Score=198.65 Aligned_cols=130 Identities=18% Similarity=0.116 Sum_probs=122.3
Q ss_pred cccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Q 007619 260 EANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNAR 335 (595)
Q Consensus 260 Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~ 335 (595)
|++++.. +..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+. |+.+++++|+..| +++|.+|..
T Consensus 2 ~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHML---GGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPA 76 (136)
T ss_dssp CCCCSCC---CCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTT
T ss_pred CCCccCC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCC
Confidence 3466665 889999999999999999999999999 54 5789999999999 9999999999998 999999999
Q ss_pred -CChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCC
Q 007619 336 -GHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 394 (595)
Q Consensus 336 -G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~ 394 (595)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.++++.|++.|++
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999998863
No 56
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=3e-24 Score=205.38 Aligned_cols=161 Identities=18% Similarity=0.199 Sum_probs=143.1
Q ss_pred CCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchH
Q 007619 230 NLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYA 305 (595)
Q Consensus 230 ~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tp 305 (595)
..+.++++.++..+....+..++. ..+.+++.. |..|.||||+|+..|+.+++++|++.| ++ |..|.||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~----~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 75 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQ----DTTYQVDEV---DTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSP 75 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHT----CTTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cccccHHHHHHHhccHHHHHHHHH----cCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 356788888888888676766663 223466666 889999999999999999999999999 55 4789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCC-CCccccCCCCCcHHHHHHHcCC---
Q 007619 306 LHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKG-ACASETTSDGQTAVAICRRMTR--- 381 (595)
Q Consensus 306 Lh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~G-ad~n~~d~~G~TpL~~A~~~~~--- 381 (595)
||+|+..|+.++++.|+..++++++.+|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++
T Consensus 76 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (201)
T 3hra_A 76 YLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQ 155 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSH
T ss_pred HHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchh
Confidence 999999999999999997777999999999999999999999999999999999 9999999999999999999988
Q ss_pred --hhhHHHHHHcCCCchh
Q 007619 382 --RKDYIEATKQGQETNK 397 (595)
Q Consensus 382 --~~~v~~l~~~g~~~~~ 397 (595)
.++++.|++.|.++..
T Consensus 156 ~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 156 LYQDIVKLLMENGADQSI 173 (201)
T ss_dssp HHHHHHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHHCCCCCCc
Confidence 8999999999987654
No 57
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=1.8e-25 Score=232.11 Aligned_cols=190 Identities=17% Similarity=0.123 Sum_probs=155.0
Q ss_pred HHHHHHHHcChHHHHHHHHHcCCCchh-hcccCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCc--
Q 007619 170 ELMYASAAFQMKELVLLFQRRLLNFVE-KALVEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPD-- 242 (595)
Q Consensus 170 elL~~A~~~~l~~L~~l~~~~l~~~~~-k~~~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~-- 242 (595)
..+++|....+.++++++++.+++++. + +.++.||||+|+.++. +.|++++++++.++..+.|++|.++..
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~--d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPV--DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCC--STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCccccc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence 345677777788999999999999887 5 6788999999999997 688999999999999999999988875
Q ss_pred ----chHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHh----cCCHHHHHHHHHC-------------------
Q 007619 243 ----EVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALD----SDDVELLKLLLDE------------------- 295 (595)
Q Consensus 243 ----~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~----~g~~e~v~~LL~~------------------- 295 (595)
+.+..+++.+ +++++.. |..|+||||+|+. .|+.+++++|++.
T Consensus 177 ~~~~~~~~~ll~~~-------~~~~~~~---d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~ 246 (327)
T 1sw6_A 177 NYDSGTFEALLDYL-------YPCLILE---DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNE 246 (327)
T ss_dssp HHHTTCHHHHHHHH-------GGGGGEE---CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---
T ss_pred cccHHHHHHHHHhh-------hccccCC---CCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhc
Confidence 3345555544 2466666 8999999999999 8999999999987
Q ss_pred -C-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCC
Q 007619 296 -S-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQ 370 (595)
Q Consensus 296 -g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~ 370 (595)
| ++ +..|.||||+|+. +++|+.. ++|.+|..|+||||+|+.+|+.++|++||++||+++.+|..|+
T Consensus 247 ~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~ 317 (327)
T 1sw6_A 247 KESKPNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL 317 (327)
T ss_dssp -------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccCCcccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 5 33 4789999999985 8888887 5999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHcC
Q 007619 371 TAVAICRRMT 380 (595)
Q Consensus 371 TpL~~A~~~~ 380 (595)
||||+|+++|
T Consensus 318 TpL~~A~~~g 327 (327)
T 1sw6_A 318 RPVDFGAGLE 327 (327)
T ss_dssp CGGGGTCC--
T ss_pred CHHHHHHhcC
Confidence 9999998764
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.91 E-value=1.3e-24 Score=203.11 Aligned_cols=128 Identities=18% Similarity=0.177 Sum_probs=121.2
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 007619 269 MHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAA 344 (595)
Q Consensus 269 ~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa 344 (595)
.+..|+||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|+..| +++|.+|..|+||||+|+
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~ 110 (172)
T 3v30_A 32 PDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD-VDINIYDWNGGTPLLYAV 110 (172)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH
Confidence 4889999999999999999999999999 54 578999999999999999999999997 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 345 RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 345 ~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|.+.|.....
T Consensus 111 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 111 RGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQ 163 (172)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999865443
No 59
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=1.7e-25 Score=232.12 Aligned_cols=208 Identities=15% Similarity=0.098 Sum_probs=155.8
Q ss_pred HHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcChHHHHhchhhccccCCC-------------Ccccc---cccCCcch
Q 007619 181 KELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQLRSHCVQRVVRSNL-------------DDVCL---EKELPDEV 244 (595)
Q Consensus 181 ~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~Ll~~~~~~i~~~~~-------------~~t~L---~~al~~~~ 244 (595)
.++++++++.+++++.+ +.++.++++ -...-.+.|++++++....... ..... +.......
T Consensus 32 ~dlv~~ll~~ga~i~~~--~~~g~~~~~-g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~ 108 (327)
T 1sw6_A 32 HDLTSDFLSSPLKIMKA--LPSPVVNDN-EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSL 108 (327)
T ss_dssp TTCCCSTTTSSCCCEEC--BCCCCCCCH-HHHHHHHHHHHHHHC-------------------------------CHHHH
T ss_pred CchHHHHhhCCcccccC--CCCCCcccC-chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhh
Confidence 45677888888888776 456666665 1111125677777664331100 00000 01111222
Q ss_pred HHHHHHHHhhhcccccccccc-cCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCC---HH
Q 007619 245 SGEIKSLRVKSDEECEANIAE-VDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCN---PK 316 (595)
Q Consensus 245 l~~ii~lL~~~~~~~Ga~~~~-~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~---~~ 316 (595)
+.++++++ ++.|+++|. . |..|+||||+|+..|+.++|++||++| ++ |..|+||||+|+.+|+ .+
T Consensus 109 ~~~~~~~l----~~~g~dvn~~~---d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 109 LQEVNDAF----PNTQLNLNIPV---DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp HHHHHHHC----TTSCCCSCSCC---STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTT
T ss_pred HHHHHHHH----HhcCCCccccc---CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHH
Confidence 24444444 667889888 5 899999999999999999999999999 65 4789999999999998 68
Q ss_pred HHHHHHHcCCCCccccCCCCChHHHHHHH----cCCHHHHHHHHhCCC--------------------------------
Q 007619 317 VFKEVLNMGLADLNLKNARGHTVLHVAAR----RKEPAVLVTLLSKGA-------------------------------- 360 (595)
Q Consensus 317 ~v~~LL~~~~advn~~d~~G~TpLh~Aa~----~~~~~iv~~LL~~Ga-------------------------------- 360 (595)
++..||..+.++++.+|..|+||||+|+. .|+.+++++|++.++
T Consensus 182 ~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~ 261 (327)
T 1sw6_A 182 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDS 261 (327)
T ss_dssp CHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CH
T ss_pred HHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCCh
Confidence 88888888778899999999999999999 899999999998743
Q ss_pred -------------CccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchhh
Q 007619 361 -------------CASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKD 398 (595)
Q Consensus 361 -------------d~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~~ 398 (595)
++|.+|..|+||||+|+..|+.+++++|++.|+++...
T Consensus 262 L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~ 312 (327)
T 1sw6_A 262 ILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIA 312 (327)
T ss_dssp HHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCC
T ss_pred hHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 57888999999999999999999999999999987643
No 60
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=3.8e-24 Score=196.28 Aligned_cols=118 Identities=23% Similarity=0.178 Sum_probs=113.0
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~ 345 (595)
+..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..| +++|.+|..|+||||+|+.
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHG-ADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHH
Confidence 788999999999999999999999999 54 578999999999999999999999997 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHH
Q 007619 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEA 388 (595)
Q Consensus 346 ~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l 388 (595)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 110 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 110 HNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999999999999999998875
No 61
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.91 E-value=5.4e-24 Score=202.75 Aligned_cols=129 Identities=16% Similarity=0.173 Sum_probs=122.5
Q ss_pred CCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHH
Q 007619 268 PMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVA 343 (595)
Q Consensus 268 ~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~A 343 (595)
.+|..|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..| ++++.+|..|+||||+|
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG-SNVNTKDFSGKTPLMWS 108 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHH
Confidence 34899999999999999999999999998 44 478999999999999999999999998 99999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 344 ARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 344 a~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|.++..
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 162 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA 162 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 999999999999999999999999999999999999999999999999987654
No 62
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=9.1e-25 Score=219.97 Aligned_cols=170 Identities=18% Similarity=0.135 Sum_probs=137.8
Q ss_pred ccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccC-CCCCCCCcHHHHHHhc---CCHHHHHHHHHCC-C--
Q 007619 225 RVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVD-PMHAKRVRRIHKALDS---DDVELLKLLLDES-N-- 297 (595)
Q Consensus 225 ~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~-~~d~~g~tpLh~A~~~---g~~e~v~~LL~~g-~-- 297 (595)
....+..+.++++.++..+.. ++++.|++...+.|++++..+ ..+..|+||||+|+.. |+.++|++|++.| +
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNC-QELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp -----CCCHHHHHHHHHTTCS-STTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred CCCCCcccchHHHHHHHcCCH-HHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 344667788999987776663 333333333344566665322 2378999999999987 9999999999987 3
Q ss_pred ------------CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCC--------------CCChHHHHHHHcCCHHH
Q 007619 298 ------------VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNA--------------RGHTVLHVAARRKEPAV 351 (595)
Q Consensus 298 ------------in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~--------------~G~TpLh~Aa~~~~~~i 351 (595)
.|..|+||||+|+..|+.+++++||+.| +++|.++. .|+||||+|+..|+.++
T Consensus 85 ~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 163 (273)
T 2pnn_A 85 SLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENG-ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAI 163 (273)
T ss_dssp CHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHH
T ss_pred chhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcCccccccccccccccccccCCCCHHHHHHHcCCHHH
Confidence 3458999999999999999999999997 99999997 79999999999999999
Q ss_pred HHHHHh---CCCCccccCCCCCcHHHHHHHcCC---------hhhHHHHHHcCCCch
Q 007619 352 LVTLLS---KGACASETTSDGQTAVAICRRMTR---------RKDYIEATKQGQETN 396 (595)
Q Consensus 352 v~~LL~---~Gad~n~~d~~G~TpL~~A~~~~~---------~~~v~~l~~~g~~~~ 396 (595)
+++|++ +|++++.+|..|+||||+|+..|+ .++++.|++.|.+++
T Consensus 164 v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 164 VKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 999999 999999999999999999999988 678888888876543
No 63
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=2.3e-24 Score=199.97 Aligned_cols=122 Identities=21% Similarity=0.268 Sum_probs=114.5
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~ 345 (595)
+..|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..| +++|.+|..|+||||+|+.
T Consensus 39 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 117 (165)
T 3twr_A 39 EGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHG-AVVNVADLWKFTPLHEAAA 117 (165)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHH
Confidence 778999999999999999999999999 54 578999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCC
Q 007619 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 393 (595)
Q Consensus 346 ~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~ 393 (595)
.|+.+++++|+++|++++.+|..|+||||+|+. ++.+++++|.+.|+
T Consensus 118 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 118 KGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999999999999999999999877 89999999998875
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=3.2e-24 Score=202.07 Aligned_cols=133 Identities=23% Similarity=0.277 Sum_probs=124.5
Q ss_pred ccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCC
Q 007619 261 ANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARG 336 (595)
Q Consensus 261 a~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G 336 (595)
.+++.. +..|+||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++||..| +++|.+|..|
T Consensus 30 ~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g 105 (179)
T 3f6q_A 30 NDLNQG---DDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYK-ADINAVNEHG 105 (179)
T ss_dssp SCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTS
T ss_pred cccccc---CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCC
Confidence 345544 889999999999999999999999999 55 478999999999999999999999998 9999999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 337 HTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 337 ~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++..+++.+.+.|+++..
T Consensus 106 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 106 NVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 9999999999999999999999999999999999999999999999999999999987763
No 65
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=1.3e-24 Score=217.04 Aligned_cols=137 Identities=19% Similarity=0.176 Sum_probs=120.7
Q ss_pred ccccccccC-CCCCCCCcHHHHHH---hcCCHHHHHHHHHCC-CC--------------CCCCchHHHHHHHcCCHHHHH
Q 007619 259 CEANIAEVD-PMHAKRVRRIHKAL---DSDDVELLKLLLDES-NV--------------TLDDAYALHYAAAYCNPKVFK 319 (595)
Q Consensus 259 ~Ga~~~~~~-~~d~~g~tpLh~A~---~~g~~e~v~~LL~~g-~i--------------n~~G~tpLh~Aa~~g~~~~v~ 319 (595)
+|++++..+ ..+..|.||||+|+ ..|+.++|++|++.| +. |..|+||||+|+..|+.++++
T Consensus 31 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~ 110 (260)
T 3jxi_A 31 HKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVE 110 (260)
T ss_dssp HTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHH
T ss_pred cCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHH
Confidence 456666553 23578999999999 779999999999987 31 238999999999999999999
Q ss_pred HHHHcCCCCccccC--------------CCCChHHHHHHHcCCHHHHHHHHh---CCCCccccCCCCCcHHHHHHHcCC-
Q 007619 320 EVLNMGLADLNLKN--------------ARGHTVLHVAARRKEPAVLVTLLS---KGACASETTSDGQTAVAICRRMTR- 381 (595)
Q Consensus 320 ~LL~~~~advn~~d--------------~~G~TpLh~Aa~~~~~~iv~~LL~---~Gad~n~~d~~G~TpL~~A~~~~~- 381 (595)
.||+.| +++|.++ ..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++
T Consensus 111 ~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~ 189 (260)
T 3jxi_A 111 LLVEKG-ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADN 189 (260)
T ss_dssp HHHHTT-CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCS
T ss_pred HHHhCC-CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccC
Confidence 999998 9999999 689999999999999999999999 999999999999999999999887
Q ss_pred --------hhhHHHHHHcCCCch
Q 007619 382 --------RKDYIEATKQGQETN 396 (595)
Q Consensus 382 --------~~~v~~l~~~g~~~~ 396 (595)
.++++.|++.|++++
T Consensus 190 ~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 190 TRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHHHhCcccc
Confidence 588888888887553
No 66
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.7e-23 Score=188.28 Aligned_cols=122 Identities=22% Similarity=0.193 Sum_probs=115.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~ 345 (595)
...|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.++++.|+..| +++|.+|..|+||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHH
Confidence 667899999999999999999999999 55 478999999999999999999999997 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcC
Q 007619 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQG 392 (595)
Q Consensus 346 ~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g 392 (595)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|.+.|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999876
No 67
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=4.2e-23 Score=191.86 Aligned_cols=125 Identities=18% Similarity=0.167 Sum_probs=119.0
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 007619 272 KRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (595)
Q Consensus 272 ~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~ 347 (595)
.|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcC
Confidence 5789999999999999999999999 44 578999999999999999999999997 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 348 EPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 348 ~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|.++..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 130 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI 130 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999987654
No 68
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=3.3e-23 Score=190.18 Aligned_cols=124 Identities=15% Similarity=0.138 Sum_probs=116.4
Q ss_pred cccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCC
Q 007619 262 NIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGH 337 (595)
Q Consensus 262 ~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~ 337 (595)
+++.. +..|.||||+ +..|+.+++++|++.| ++ |..|.||||+|+..|+.++++.|+..| +++|.+|..|+
T Consensus 28 ~~~~~---~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~ 102 (156)
T 1bd8_A 28 HPDAL---NRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHG-ADVNVPDGTGA 102 (156)
T ss_dssp CTTCC---CTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSC
T ss_pred Ccccc---CCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCC
Confidence 55555 8889999999 9999999999999999 54 478999999999999999999999998 99999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHc
Q 007619 338 TVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQ 391 (595)
Q Consensus 338 TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~ 391 (595)
||||+|+..|+.+++++|+++ ++++.+|..|+||||+|+..|+.++++.|+++
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 103 LPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999999999 99999999999999999999999999998764
No 69
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=197.39 Aligned_cols=152 Identities=24% Similarity=0.391 Sum_probs=135.2
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcC
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v 124 (595)
.|.+.+..+|.+++.++ .+|||+|+|+|+.|+|||+||+++|+||++||.+++.++ ....|.++++
T Consensus 16 ~p~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~------~~~~i~l~~~------ 81 (172)
T 3htm_A 16 VPECRLADELGGLWENS--RFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES------KKNRVEINDV------ 81 (172)
T ss_dssp CCCCCHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGG------GTTEEEECSS------
T ss_pred CCHHHHHHHHHHHHhCC--CCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCcccc------CCCeEEecCC------
Confidence 35568999999999999 999999999999999999999999999999999999887 6678999874
Q ss_pred CHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcH
Q 007619 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVI 204 (595)
Q Consensus 125 ~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~ 204 (595)
++++|..+|+|+|||++...+. .+.+++.+|.+|+++.+++.|.+++..... .+|+.
T Consensus 82 ~~~~f~~~l~~~Yt~~~~~~~~--------------------~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~n~~ 138 (172)
T 3htm_A 82 EPEVFKEMMCFIYTGKAPNLDK--------------------MADDLLAAADKYALERLKVMCEDALCSNLS---VENAA 138 (172)
T ss_dssp CHHHHHHHHHHHHHSCCTTGGG--------------------THHHHHHHHHHTTCHHHHHHHHHHHHHTCC---TTTHH
T ss_pred CHHHHHHHHHHHhCCCCCCcHH--------------------HHHHHHHHHHHhCcHHHHHHHHHHHHHhCC---HHHHH
Confidence 5559999999999999876543 378999999999999999999999887666 68999
Q ss_pred HHHHHHHHcChHHHHhchhhccccCCCCc
Q 007619 205 PILVAAFHCQLNQLRSHCVQRVVRSNLDD 233 (595)
Q Consensus 205 t~L~~A~~~~~~~Ll~~~~~~i~~~~~~~ 233 (595)
..+.+|..++...|.+.|.+++.++....
T Consensus 139 ~~~~~A~~~~~~~L~~~~~~~i~~~~~~v 167 (172)
T 3htm_A 139 EILILADLHSADQLKTQAVDFINYHATDV 167 (172)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998876543
No 70
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=6.8e-23 Score=180.15 Aligned_cols=122 Identities=30% Similarity=0.371 Sum_probs=116.9
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 007619 272 KRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (595)
Q Consensus 272 ~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~ 347 (595)
+|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcC
Confidence 4899999999999999999999999 44 578999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCC
Q 007619 348 EPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQE 394 (595)
Q Consensus 348 ~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~ 394 (595)
+.+++++|+++|++++.+|..|+||||+|+..++.++++.|++.|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999874
No 71
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=5.5e-24 Score=191.45 Aligned_cols=129 Identities=19% Similarity=0.146 Sum_probs=113.3
Q ss_pred cccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Q 007619 260 EANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNAR 335 (595)
Q Consensus 260 Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~ 335 (595)
|+|+ .. |..|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..| ++++.+|..
T Consensus 1 G~d~-~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~ 75 (137)
T 3c5r_A 1 GIDP-FT---NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQ 75 (137)
T ss_dssp ---C-CC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGG
T ss_pred CCCC-Cc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCC
Confidence 5566 33 899999999999999999999999999 54 578999999999999999999999998 999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCC
Q 007619 336 GHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 393 (595)
Q Consensus 336 G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~ 393 (595)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+..+++.++.+.+.
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999998887777766655543
No 72
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.89 E-value=8.5e-23 Score=189.39 Aligned_cols=127 Identities=23% Similarity=0.245 Sum_probs=119.5
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC-----CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES-----NVTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAA 344 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g-----~in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa 344 (595)
+..|.||||.|+..|+.++++.|++.+ ..+..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcC-CCCCccCCCCCCHHHHHH
Confidence 678899999999999999999999976 33577899999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 345 RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 345 ~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|.++..
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 99999999999999999999999999999999999999999999999987654
No 73
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.89 E-value=9.7e-23 Score=186.84 Aligned_cols=124 Identities=18% Similarity=0.201 Sum_probs=117.7
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHCC-C--CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCH
Q 007619 273 RVRRIHKALDSDDVELLKLLLDES-N--VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEP 349 (595)
Q Consensus 273 g~tpLh~A~~~g~~e~v~~LL~~g-~--in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~ 349 (595)
..||||.|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAG-VSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcChH
Confidence 358999999999999999999999 3 4578999999999999999999999988 99999999999999999999999
Q ss_pred HHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 350 AVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 350 ~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|.++..
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 128 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT 128 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 999999999999999999999999999999999999999999987653
No 74
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.89 E-value=1.9e-22 Score=188.38 Aligned_cols=124 Identities=18% Similarity=0.173 Sum_probs=116.7
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHCC-C----CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 007619 273 RVRRIHKALDSDDVELLKLLLDES-N----VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (595)
Q Consensus 273 g~tpLh~A~~~g~~e~v~~LL~~g-~----in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~ 347 (595)
+.||||+|+..|+.++++.|++.| . .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG-ADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCchhhcccCCCHHHHHHHCC
Confidence 468999999999999999999998 2 3688999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 348 EPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 348 ~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|.++..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999987654
No 75
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=2e-23 Score=192.41 Aligned_cols=128 Identities=20% Similarity=0.140 Sum_probs=115.7
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCh-HHHHH
Q 007619 269 MHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHT-VLHVA 343 (595)
Q Consensus 269 ~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~T-pLh~A 343 (595)
.+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+ .|+.+++++||..| +++|.+|..|+| |||+|
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPVHDA 85 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHHHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHH
Confidence 3788999999999999999999999999 54 478999999985 99999999999997 999999999999 99999
Q ss_pred HHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchhh
Q 007619 344 ARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKD 398 (595)
Q Consensus 344 a~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~~ 398 (595)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|.++...
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999877643
No 76
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.89 E-value=1.8e-22 Score=188.31 Aligned_cols=127 Identities=20% Similarity=0.253 Sum_probs=119.2
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~ 345 (595)
...+.++||+|+..|+.++|++|++.| ++ |..|.||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG-ADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHH
Confidence 567789999999999999999999999 55 478999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 346 ~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|.++..
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 141 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA 141 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999999999999999999999999999987643
No 77
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=1.6e-22 Score=186.68 Aligned_cols=151 Identities=20% Similarity=0.127 Sum_probs=128.3
Q ss_pred CCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcH
Q 007619 201 EDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRR 276 (595)
Q Consensus 201 ~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tp 276 (595)
+...++|+.|+..+. +.|++.+.++..++..+.|+++.+.. .. .+++++|+ ++|++++.. +..|+||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~-~~~v~~Ll----~~g~~~~~~---~~~g~t~ 73 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GN-PEIARRLL----LRGANPDLK---DRTGFAV 73 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SC-HHHHHHHH----HTTCCTTCC---CTTSCCH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-Cc-HHHHHHHH----HcCCCCCCC---CCCCCCH
Confidence 345678888888886 56677777777778888888888777 55 66777774 458888877 8899999
Q ss_pred HHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCChHHHHHHHcCCHHH
Q 007619 277 IHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLAD-LNLKNARGHTVLHVAARRKEPAV 351 (595)
Q Consensus 277 Lh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~ad-vn~~d~~G~TpLh~Aa~~~~~~i 351 (595)
||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..| ++ ++.+|..|+||||+|+..|+.++
T Consensus 74 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~t~l~~A~~~~~~~~ 152 (162)
T 1ihb_A 74 IHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT-ASNVGHRNHKGDTACDLARLYGRNEV 152 (162)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS-CCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc-CCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 99999999999999999999 54 578999999999999999999999998 66 79999999999999999999999
Q ss_pred HHHHHhCCCC
Q 007619 352 LVTLLSKGAC 361 (595)
Q Consensus 352 v~~LL~~Gad 361 (595)
+++|+++|||
T Consensus 153 ~~~Ll~~GAd 162 (162)
T 1ihb_A 153 VSLMQANGAG 162 (162)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHHhCCC
Confidence 9999999986
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.89 E-value=1.8e-23 Score=206.90 Aligned_cols=156 Identities=17% Similarity=0.148 Sum_probs=116.0
Q ss_pred CCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHH
Q 007619 231 LDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYAL 306 (595)
Q Consensus 231 ~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpL 306 (595)
.+.|+++.+..... .++++.| +++|++++. +..|.||||+|+..|+.++|++|++.| ++ |..|.|||
T Consensus 4 ~g~t~L~~a~~~~~-~~~~~~l----l~~g~~~~~----~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L 74 (239)
T 1ycs_B 4 TGQVSLPPGKRTNL-RKTGSER----IAHGMRVKF----NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITAL 74 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHH
T ss_pred cccccCchhhhhhh-HHHHHHH----hccCCCccc----CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 35666666666555 4444444 456778764 467899999999999999999999999 55 57899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCC-cHHHHH--HHcCChh
Q 007619 307 HYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQ-TAVAIC--RRMTRRK 383 (595)
Q Consensus 307 h~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~-TpL~~A--~~~~~~~ 383 (595)
|+|+..|+.+++++||..| +++|.+|..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..|+.+
T Consensus 75 ~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~ 153 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFG-VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQ 153 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCC
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHH
Confidence 9999999999999999997 99999999999999999999999999999999999999998887 999999 7889999
Q ss_pred hHHHHHHcCCCch
Q 007619 384 DYIEATKQGQETN 396 (595)
Q Consensus 384 ~v~~l~~~g~~~~ 396 (595)
++++|++.|..+.
T Consensus 154 ~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 154 CSQFLYGVQEKMG 166 (239)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHhhhccc
Confidence 9999999886544
No 79
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.88 E-value=3.7e-22 Score=187.88 Aligned_cols=127 Identities=17% Similarity=0.198 Sum_probs=116.4
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES--NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAA 344 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa 344 (595)
+..+.++||.|+..|+.++|++|++.+ ++ +..|+||||+|+..|+.+++++|+..| +++|.+|..|+||||+|+
T Consensus 2 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 2 SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG-ARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp -----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH
Confidence 356789999999999999999999996 33 578999999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 345 RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 345 ~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++.|.++..
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 99999999999999999999999999999999999999999999999987654
No 80
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=2.8e-23 Score=204.48 Aligned_cols=140 Identities=21% Similarity=0.226 Sum_probs=126.9
Q ss_pred ccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 007619 257 EECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLK 332 (595)
Q Consensus 257 ~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~ 332 (595)
+..|++++..+..+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++||+.| +++|.+
T Consensus 5 l~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~n~~ 83 (229)
T 2vge_A 5 LRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAG-ANVNSP 83 (229)
T ss_dssp -----CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred hccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCC
Confidence 4568888888877889999999999999999999999999 55 478999999999999999999999997 999999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCccccC-CCCCcHHHHH--HHcCChhhHHHHHHcCCCchh
Q 007619 333 NARGHTVLHVAARRKEPAVLVTLLSKGACASETT-SDGQTAVAIC--RRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 333 d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d-~~G~TpL~~A--~~~~~~~~v~~l~~~g~~~~~ 397 (595)
|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+| +..|+.+++++|++.|.++..
T Consensus 84 d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~ 151 (229)
T 2vge_A 84 DSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL 151 (229)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc
Confidence 9999999999999999999999999999999987 6999999999 999999999999999876543
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=1.8e-23 Score=199.27 Aligned_cols=148 Identities=10% Similarity=0.039 Sum_probs=121.9
Q ss_pred cccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCH----HHHHHHHHCC-CCC---CCCchHH
Q 007619 235 CLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDV----ELLKLLLDES-NVT---LDDAYAL 306 (595)
Q Consensus 235 ~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~----e~v~~LL~~g-~in---~~G~tpL 306 (595)
+++.++..+.+..+..++. .+++..+ +..|+||||+|+..|+. +++++||+.| ++| ..|+|||
T Consensus 9 ~l~~Aa~~g~~~~~~~l~~-------~~~~~~~--~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL 79 (186)
T 3t8k_A 9 TVSAAAMLGTYEDFLELFE-------KGYEDKE--SVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLF 79 (186)
T ss_dssp SHHHHHHHSCHHHHHHHHH-------HSSSCHH--HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTH
T ss_pred HHHHHHHcCCHHHHHHHHh-------cCccccc--ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 3444444444455544441 2344441 37799999999999975 5999999999 654 7899999
Q ss_pred HHHHHcCC------HHHHHHHHHcCCCCccccCCCCC-hHHHHHHHcC-----CHHHHHHHHh-CCCCccccCCCCCcHH
Q 007619 307 HYAAAYCN------PKVFKEVLNMGLADLNLKNARGH-TVLHVAARRK-----EPAVLVTLLS-KGACASETTSDGQTAV 373 (595)
Q Consensus 307 h~Aa~~g~------~~~v~~LL~~~~advn~~d~~G~-TpLh~Aa~~~-----~~~iv~~LL~-~Gad~n~~d~~G~TpL 373 (595)
|+|+..|+ .++++.||..| |++|.+|..|+ ||||+|+..+ +.+++++|++ +|++++.+|..|+|||
T Consensus 80 h~a~~~~~~~~~~~~~iv~~Ll~~G-adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL 158 (186)
T 3t8k_A 80 FPLFQGGGNDITGTTELCKIFLEKG-ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTAL 158 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTT-CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhhHHHHHHHHHHCC-CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHH
Confidence 99999987 57899999998 99999999999 9999999954 3569999999 9999999999999999
Q ss_pred HHHHHcCChhhHHHHHHcC
Q 007619 374 AICRRMTRRKDYIEATKQG 392 (595)
Q Consensus 374 ~~A~~~~~~~~v~~l~~~g 392 (595)
|+|++.|+.+++++|.+..
T Consensus 159 ~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 159 EFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHH
Confidence 9999999999999998764
No 82
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=1.9e-22 Score=204.13 Aligned_cols=128 Identities=15% Similarity=0.137 Sum_probs=120.1
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHCC--CC---CCCCchHHHHHH-----HcCCHHHHHHHHHcCCCCccccCCCCCh
Q 007619 269 MHAKRVRRIHKALDSDDVELLKLLLDES--NV---TLDDAYALHYAA-----AYCNPKVFKEVLNMGLADLNLKNARGHT 338 (595)
Q Consensus 269 ~d~~g~tpLh~A~~~g~~e~v~~LL~~g--~i---n~~G~tpLh~Aa-----~~g~~~~v~~LL~~~~advn~~d~~G~T 338 (595)
.|.+|+||||+|+..|+.++|++|++.| ++ |..|+||||+|+ ..++.++++.|+..| ++++..+..|+|
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t 185 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG-NINAKASQAGQT 185 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS-CTTCCCTTTCCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC-CCccccCCCCCC
Confidence 3899999999999999999999999999 33 578999999999 668899999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHH-cCCCchh
Q 007619 339 VLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATK-QGQETNK 397 (595)
Q Consensus 339 pLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~-~g~~~~~ 397 (595)
|||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++++.|++ .|.++..
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~ 245 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL 245 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999 7886654
No 83
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.87 E-value=7.7e-23 Score=186.54 Aligned_cols=138 Identities=25% Similarity=0.422 Sum_probs=100.6
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcC
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v 124 (595)
.|++.+.++|.+++.++ .+|||+|.++|+.|+|||+||+++|+||++||.+++.++ ....|.++++
T Consensus 7 ~p~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~------~~~~i~l~~~------ 72 (145)
T 4eoz_A 7 VPECRLADELGGLWENS--RFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES------KKNRVEINDV------ 72 (145)
T ss_dssp CCCCCHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHH------HHTEEEECSS------
T ss_pred CChHHHHHHHHHHHhCC--CCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCC------CCceEEecCC------
Confidence 35568999999999999 999999999999999999999999999999999988776 5578888874
Q ss_pred CHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcH
Q 007619 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVI 204 (595)
Q Consensus 125 ~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~ 204 (595)
++++|+.+|+|+|||++..... .+.+++.+|.+|+++.++..|.+++..... .+|+.
T Consensus 73 ~~~~~~~~l~~~Y~~~~~~~~~--------------------~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~n~~ 129 (145)
T 4eoz_A 73 EPEVFKEMMCFIYTGKAPNLDK--------------------MADDLLAAADKYALERLKVMCEDALCSNLS---VENAA 129 (145)
T ss_dssp CHHHHHHHHHHHHHSCCTTGGG--------------------THHHHHHHHHHTTCHHHHHHHHCC--------------
T ss_pred CHHHHHHHHHhhccCccCCcHH--------------------HHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---HHHHH
Confidence 5559999999999999876543 378999999999999999999999998877 78999
Q ss_pred HHHHHHHHcChHHHH
Q 007619 205 PILVAAFHCQLNQLR 219 (595)
Q Consensus 205 t~L~~A~~~~~~~Ll 219 (595)
.++.+|..++...|.
T Consensus 130 ~~l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 130 EILILADLHSADQLK 144 (145)
T ss_dssp ---------------
T ss_pred HHHHHHHHhCHHHhc
Confidence 999999999987764
No 84
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.87 E-value=1.4e-22 Score=203.09 Aligned_cols=154 Identities=18% Similarity=0.267 Sum_probs=129.3
Q ss_pred cCChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCC--CCCCCcCCCCCeeeecccccC
Q 007619 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGND--NDGSAVSEGKPKYLMTELVPY 121 (595)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~--e~~~~~~~~~~~i~l~~l~~~ 121 (595)
..+.+.+.++|.+++.++ .+|||+|+|+|+.|+|||+||+++|+||++||.+++. ++ ...+|.+++
T Consensus 12 ~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~------~~~~i~l~~---- 79 (256)
T 3hve_A 12 PQHAARLLRALSSFREES--RFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDG------STYKIELEG---- 79 (256)
T ss_dssp TTTHHHHHHHHHTCCC----CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------------CEEECSS----
T ss_pred hHHHHHHHHHHHHHHhcC--CCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccC------CCCeEEeCC----
Confidence 457889999999999999 9999999999999999999999999999999998876 44 557888887
Q ss_pred CcCCHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchhhcccC
Q 007619 122 GKVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVEKALVE 201 (595)
Q Consensus 122 ~~v~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~ 201 (595)
+++++|..+|+|+|||++.+...+ +.+++.+|..|+++.+++.|.+++..... .+
T Consensus 80 --v~~~~f~~ll~~~Yt~~~~i~~~~--------------------v~~ll~~A~~l~i~~l~~~c~~~L~~~l~---~~ 134 (256)
T 3hve_A 80 --ISVMVMREILDYIFSGQIRLNEDT--------------------IQDVVQAADLLLLTDLKTLCCEFLEGCIA---AE 134 (256)
T ss_dssp --CCHHHHHHHHHHHHHSCCCCC-CC--------------------HHHHHHHHHHHTCHHHHHHHHHHHHHTCC---SS
T ss_pred --CCHHHHHHHHhhccCCCCcccHhH--------------------HHHHHHHHHHHChHHHHHHHHHHHHhhCC---Hh
Confidence 455599999999999999877544 78999999999999999999999987777 78
Q ss_pred CcHHHHHHHHHcChHHHHhchhhccccCCCCcc
Q 007619 202 DVIPILVAAFHCQLNQLRSHCVQRVVRSNLDDV 234 (595)
Q Consensus 202 n~~t~L~~A~~~~~~~Ll~~~~~~i~~~~~~~t 234 (595)
|+..++.+|..++...|.+.|.+++..+.....
T Consensus 135 n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~ 167 (256)
T 3hve_A 135 NCIGIRDFALHYCLHHVHYLATEYLETHFRDVS 167 (256)
T ss_dssp TTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999988765443
No 85
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=2e-22 Score=177.79 Aligned_cols=108 Identities=26% Similarity=0.255 Sum_probs=100.5
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~ 345 (595)
+..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..| +++|.+|..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHH
Confidence 667899999999999999999999999 54 478999999999999999999999997 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHH
Q 007619 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRR 378 (595)
Q Consensus 346 ~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~ 378 (595)
.|+.+++++|+++|++++.+|.+|+||||+|..
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 999999999999999999999999999999943
No 86
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.87 E-value=9.7e-22 Score=180.31 Aligned_cols=121 Identities=19% Similarity=0.205 Sum_probs=113.4
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHCC--CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 007619 273 RVRRIHKALDSDDVELLKLLLDES--NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (595)
Q Consensus 273 g~tpLh~A~~~g~~e~v~~LL~~g--~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~ 347 (595)
+.||||+|+..|+.++++.|++.+ ++ |..|+||||+ +..|+.++++.|++.| +++|.+|..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQG-ASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcC
Confidence 569999999999999999999985 43 5789999999 9999999999999997 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCch
Q 007619 348 EPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (595)
Q Consensus 348 ~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (595)
+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|++. .++.
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~ 127 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH 127 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC
Confidence 99999999999999999999999999999999999999999987 5443
No 87
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.87 E-value=1.5e-22 Score=200.19 Aligned_cols=127 Identities=13% Similarity=0.043 Sum_probs=92.2
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC-CC--CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHc
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV--TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARR 346 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i--n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~ 346 (595)
+..|.||||.|+..++.++++.|+++| ++ +..|.||||+|+..|+.++++.||..| +++|.+|..|+||||+|+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEV-DDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTT-SSCCCCCTTSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHc
Confidence 456899999999999999999999999 55 467899999999999999999999998 99999999999999999999
Q ss_pred CCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchh
Q 007619 347 KEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 347 ~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~ 397 (595)
|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|++.|.+++.
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 131 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA 131 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce
Confidence 999999999999999999999999999999999999999999999987764
No 88
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.85 E-value=3.1e-22 Score=203.15 Aligned_cols=160 Identities=17% Similarity=0.237 Sum_probs=136.3
Q ss_pred cCChhHHHHHHHHHHccCCCCccCeEEEEc---CeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeeccccc
Q 007619 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVE---GKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVP 120 (595)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~i~v~---g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~ 120 (595)
..+.+.+.+.|.+++.++ .+|||+|+|+ |+.|+|||+||+++|+||++||.+++.|+ ...+|.|+++..
T Consensus 13 ~~h~~~ll~~l~~l~~~~--~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~------~~~~i~l~~~~~ 84 (279)
T 3i3n_A 13 SSHCSELSWRQNEQRRQG--LFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSES------RSGRVEMRKWSS 84 (279)
T ss_dssp TTHHHHHHHHHHHHHHHT--TTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------------EEECCCCSS
T ss_pred HhHHHHHHHHHHHHHhcC--CCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccc------cCCeEEeccccc
Confidence 357889999999999999 9999999998 99999999999999999999999999988 778999997665
Q ss_pred CCcCCHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchhhccc
Q 007619 121 YGKVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVEKALV 200 (595)
Q Consensus 121 ~~~v~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~ 200 (595)
..++++++|..+|+|+|||++.+...+ +.+++.+|.+|+++.+++.|.+++..... .
T Consensus 85 ~~~v~~~~f~~ll~~~Ytg~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~c~~~L~~~l~---~ 141 (279)
T 3i3n_A 85 EPGPEPDTVEAVIEYMYTGRIRVSTGS--------------------VHEVLELADRFLLIRLKEFCGEFLKKKLH---L 141 (279)
T ss_dssp TTCSCHHHHHHHHHHHHHSEEEEETTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHHHHCC---T
T ss_pred cCCCCHHHHHHHHHhhCcCCcccCHHH--------------------HHHHHHHHHHHCcHHHHHHHHHHHHHcCC---c
Confidence 456888899999999999999776544 78999999999999999999999988777 7
Q ss_pred CCcHHHHHHHHHcChHHHHhchhhccccCCCCcc
Q 007619 201 EDVIPILVAAFHCQLNQLRSHCVQRVVRSNLDDV 234 (595)
Q Consensus 201 ~n~~t~L~~A~~~~~~~Ll~~~~~~i~~~~~~~t 234 (595)
+|+..++.+|..+++..|.+.|.+++..+.....
T Consensus 142 ~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~ 175 (279)
T 3i3n_A 142 SNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVI 175 (279)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHT
T ss_pred chHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999988765443
No 89
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=7.9e-22 Score=181.57 Aligned_cols=115 Identities=17% Similarity=0.103 Sum_probs=89.9
Q ss_pred cccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCch-HHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 007619 258 ECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAY-ALHYAAAYCNPKVFKEVLNMGLADLNLK 332 (595)
Q Consensus 258 ~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~t-pLh~Aa~~g~~~~v~~LL~~~~advn~~ 332 (595)
++|++++.. +..|+||||+|+ .|+.+++++|++.| ++ |..|+| |||+|+..|+.+++++||..| +++|.+
T Consensus 33 ~~g~~~~~~---~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~g-a~~~~~ 107 (156)
T 1bi7_B 33 EAGANPNAP---NSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVR 107 (156)
T ss_dssp TTTCCTTCC---CSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT-CCSSCC
T ss_pred HcCCCCCCC---CCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcC-CCCccc
Confidence 346777776 889999999996 99999999999999 55 477998 999999999999999999998 999999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHH
Q 007619 333 NARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICR 377 (595)
Q Consensus 333 d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~ 377 (595)
|..|+||||+|+..|+.+++++|+++|++++.++..|.||.+-+.
T Consensus 108 d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 108 DAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred CCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccCC
Confidence 999999999999999999999999999999999999999987543
No 90
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.85 E-value=2.4e-21 Score=170.91 Aligned_cols=113 Identities=25% Similarity=0.358 Sum_probs=98.2
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcC
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v 124 (595)
.+.+.+.++|.+++.++ .+|||+|.++|+.|+|||+||++||+||++||.+++.++ ....|.++++
T Consensus 7 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~------~~~~i~l~~~------ 72 (120)
T 2if5_A 7 DHSSDILSGLNEQRTQG--LLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVD------QQNVYEIDFV------ 72 (120)
T ss_dssp THHHHHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----------CCSEEECCSS------
T ss_pred chHHHHHHHHHHHHhcC--CCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCcccc------CCceEEeCCC------
Confidence 47789999999999999 999999999999999999999999999999999999887 6778999874
Q ss_pred CHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcC
Q 007619 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRL 191 (595)
Q Consensus 125 ~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l 191 (595)
++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.|++.|.+++
T Consensus 73 ~~~~f~~ll~~~Yt~~~~~~~~~--------------------~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 73 SAEALTALMDFAYTATLTVSTAN--------------------VGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CHHHHHHHHHHHHHSCCCCCGGG--------------------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCCccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHh
Confidence 55599999999999999876433 789999999999999999998764
No 91
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.85 E-value=5.6e-22 Score=193.37 Aligned_cols=127 Identities=19% Similarity=0.197 Sum_probs=112.1
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~ 345 (595)
+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+.++++.||..+|+++|.+|..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 678999999999999999999999999 54 57899999999999999999999999559999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCch
Q 007619 346 RKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (595)
Q Consensus 346 ~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (595)
.|+.+++++|+++|++++.+|..|+||||+|+..++.++++.+...|....
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 999999999999999999999999999999999999999999999887654
No 92
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.85 E-value=3.5e-24 Score=210.96 Aligned_cols=176 Identities=11% Similarity=0.002 Sum_probs=90.4
Q ss_pred cCCcHHHHHHHHHcCh----HHHHhchhhccccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCc
Q 007619 200 VEDVIPILVAAFHCQL----NQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVR 275 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~~----~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~t 275 (595)
..++.++|++|+..+. +.|++.+++++.++..+.|+++.++..+. .+++++|+ ++|++++.. |..|+|
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~-~~~v~~Ll----~~ga~~n~~---d~~g~t 89 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGAN-YSIVDFLI----TAGANVNSP---DSHGWT 89 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTC-HHHHHHHH----HTTCCTTCC---CTTCCC
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHH----HCCCCCCCC---CCCCCC
Confidence 4567788888887775 33444444444444444444444444333 33333332 234444444 445555
Q ss_pred HHHHHHhcCCHHHHHHHHHCC-CCC----CCCchHHHHH--HHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC
Q 007619 276 RIHKALDSDDVELLKLLLDES-NVT----LDDAYALHYA--AAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKE 348 (595)
Q Consensus 276 pLh~A~~~g~~e~v~~LL~~g-~in----~~G~tpLh~A--a~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~ 348 (595)
|||+|+..|+.+++++|++.| +++ ..|+||||+| +..|+.+++++|+..| +++|.+|..|.||||.++..+.
T Consensus 90 pLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~l~~~~~~~~ 168 (229)
T 2vge_A 90 PLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVE-QSMGLMNSGAVYALWDYSAEFG 168 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH-HHTTTSGGGEEEESSCBCCSST
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC-CCcccccCCchHHHHHHhhccc
Confidence 555555555555555555555 221 2455555555 5555555555555554 5555555555555553333221
Q ss_pred HHHHHHHHhCCCC--ccccCCCCCcHHHHHHHcCChhhHHH
Q 007619 349 PAVLVTLLSKGAC--ASETTSDGQTAVAICRRMTRRKDYIE 387 (595)
Q Consensus 349 ~~iv~~LL~~Gad--~n~~d~~G~TpL~~A~~~~~~~~v~~ 387 (595)
.++|++.|++ ++.+|.+|+||||+|+..|+.++++.
T Consensus 169 ---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 169 ---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp ---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred ---cccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 1344455555 45566667777777777666665544
No 93
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.85 E-value=4.4e-21 Score=174.86 Aligned_cols=120 Identities=18% Similarity=0.322 Sum_probs=100.4
Q ss_pred CCcccCChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccc
Q 007619 40 SSLDNLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELV 119 (595)
Q Consensus 40 ~~~~~~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~ 119 (595)
...+..+.+.+.++|.+++.++ .+|||+|+++|+.|+|||+||++||+||++||.+++.+. .....+|.|++
T Consensus 24 ~~~~~~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~----e~~~~~I~l~~-- 95 (144)
T 2ppi_A 24 AVSDPQHAARLLRALSSFREES--RFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD----DGSTYKIELEG-- 95 (144)
T ss_dssp CCCCTTHHHHHHHHHHHTTC----CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC---------CCCEEECCS--
T ss_pred eecCcchHHHHHHHHHHHHhcC--CCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccc----cCCCcEEEeCC--
Confidence 3344467889999999999999 999999999999999999999999999999999988752 11457888887
Q ss_pred cCCcCCHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcC
Q 007619 120 PYGKVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRL 191 (595)
Q Consensus 120 ~~~~v~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l 191 (595)
+++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.|++.|.+++
T Consensus 96 ----v~~~~f~~lL~fiYtg~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 96 ----ISVMVMREILDYIFSGQIRLNEDT--------------------IQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp ----SCHHHHHHHHHHHTTSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred ----CCHHHHHHHHHHHhCCCCCCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHh
Confidence 455599999999999999876544 789999999999999999999875
No 94
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.85 E-value=2e-21 Score=200.27 Aligned_cols=151 Identities=24% Similarity=0.409 Sum_probs=131.4
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcC
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v 124 (595)
.|.+.|.++|.+++.++ .+|||+|.|+|+.|+|||+|||+||+||++||.+++.|+ ...+|.|+++.|.
T Consensus 156 ~p~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~------~~~~i~l~~~~~~--- 224 (312)
T 3hqi_A 156 VPECRLADELGGLWENS--RFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES------KKNRVEINDVEPE--- 224 (312)
T ss_dssp CCCCCHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----------CCSEEEECSSCHH---
T ss_pred CCCchHHHHHHHHHhCC--CCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCcccc------CCceEEecCCCHH---
Confidence 45678999999999999 999999999999999999999999999999999999888 7789999985555
Q ss_pred CHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchhhcccCCcH
Q 007619 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVEKALVEDVI 204 (595)
Q Consensus 125 ~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~k~~~~n~~ 204 (595)
+|+.+|+|+|||.+.... +.+.++|.+|.+|+++.|+..|++++...+. .+|+.
T Consensus 225 ---~f~~~L~~iYt~~~~~~~--------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~---~~n~~ 278 (312)
T 3hqi_A 225 ---VFKEMMCFIYTGKAPNLD--------------------KMADDLLAAADKYALERLKVMCEDALCSNLS---VENAA 278 (312)
T ss_dssp ---HHHHHHHHHHHSCCTTHH--------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC---TTTHH
T ss_pred ---HHHHHHHhhcCCCCCChH--------------------HHHHHHHHHHHHhCHHHHHHHHHHHHHccCC---HHHHH
Confidence 999999999999986542 5688999999999999999999999987766 68999
Q ss_pred HHHHHHHHcChHHHHhchhhccccCCCC
Q 007619 205 PILVAAFHCQLNQLRSHCVQRVVRSNLD 232 (595)
Q Consensus 205 t~L~~A~~~~~~~Ll~~~~~~i~~~~~~ 232 (595)
..|.+|..+++..|.+.|.+++..+...
T Consensus 279 ~~l~~A~~~~~~~L~~~~~~~i~~~~~~ 306 (312)
T 3hqi_A 279 EILILADLHSADQLKTQAVDFINYHATD 306 (312)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887543
No 95
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.85 E-value=6.3e-21 Score=172.59 Aligned_cols=118 Identities=19% Similarity=0.241 Sum_probs=105.0
Q ss_pred cCChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCc
Q 007619 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGK 123 (595)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~ 123 (595)
..+.+.+.++|.+++.++ .+|||+|+|+|+.|+|||+||++||+||++||.+++.+. ..|.+++ +
T Consensus 17 ~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--------~~i~l~~-----~ 81 (138)
T 2z8h_A 17 SVHSTNVLLSLNDQRKKD--VLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--------LTVTLPE-----E 81 (138)
T ss_dssp SSHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--------EEEECCT-----T
T ss_pred CchHHHHHHHHHHHHhhC--CCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--------ceEEeCC-----C
Confidence 467889999999999999 999999999999999999999999999999999988754 4677741 3
Q ss_pred CCHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchh
Q 007619 124 VGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (595)
Q Consensus 124 v~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~ 196 (595)
+++++|..+|+|+|||++.+...+ +.+++.+|.+|+++.|++.|.+++.....
T Consensus 82 v~~~~~~~lL~~~Ytg~~~i~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 82 VTVKGFEPLIQFAYTAKLILSKDN--------------------VDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp SCHHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred CCHHHHHHHHHHhcCCCcccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 677799999999999999877544 78999999999999999999999987665
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=3.5e-21 Score=182.20 Aligned_cols=112 Identities=26% Similarity=0.333 Sum_probs=104.9
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCChHHHHHH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN-ARGHTVLHVAA 344 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d-~~G~TpLh~Aa 344 (595)
+..|.||||+|+..|+.++++.|++ | ++ |..|+||||+|+..|+.+++++|+..| +++|.++ ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHH
Confidence 5678999999999999999999999 7 44 578999999999999999999999998 9999998 89999999999
Q ss_pred HcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChh
Q 007619 345 RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRK 383 (595)
Q Consensus 345 ~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~ 383 (595)
..|+.+++++|+++|++++.+|..|+||||+|++.++..
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 157 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKTT 157 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTC
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCc
Confidence 999999999999999999999999999999999876543
No 97
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.83 E-value=3.3e-21 Score=173.14 Aligned_cols=125 Identities=16% Similarity=0.088 Sum_probs=103.3
Q ss_pred ccCCCCcccccccCCcchHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CCC---CC-
Q 007619 227 VRSNLDDVCLEKELPDEVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NVT---LD- 301 (595)
Q Consensus 227 ~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~in---~~- 301 (595)
..+..+.|+++.++.... .+++++|+ ++|++++.. |..|+||||+|+. |+.+++++|++.| +++ ..
T Consensus 7 ~~~~~g~t~L~~A~~~~~-~~~v~~Ll----~~g~~~~~~---~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~ 77 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQ-VETVRQLL----EAGADPNAL---NRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPAT 77 (136)
T ss_dssp CCCCCCSCHHHHHHHTTC-HHHHHHHH----HTTCCTTCC---CTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTT
T ss_pred CCCCCCccHHHHHHHcCC-HHHHHHHH----HcCCCcCCc---CCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCC
Confidence 333444444444444444 34444442 347787776 8899999999999 9999999999999 554 66
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCC
Q 007619 302 DAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGAC 361 (595)
Q Consensus 302 G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad 361 (595)
|+||||+|+..|+.++++.|+..| ++++.+|..|+||||+|+..++.+++++|+++|||
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999998 99999999999999999999999999999999986
No 98
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.83 E-value=1.6e-20 Score=165.45 Aligned_cols=111 Identities=24% Similarity=0.373 Sum_probs=98.3
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcC
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v 124 (595)
.+.+.+.++|.+++.++ .+|||+|.++|++|+|||+||++||+||++||.+++ ...|.++++.
T Consensus 6 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----------~~~i~l~~~~----- 68 (119)
T 3b84_A 6 QHSVRVLQELNKQREKG--QYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----------GGSVVLPAGF----- 68 (119)
T ss_dssp HHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----------CCCEEECGGG-----
T ss_pred hHHHHHHHHHHHHHhcC--CCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----------CCeEEeCCCC-----
Confidence 46788999999999999 999999999999999999999999999999998865 2478888754
Q ss_pred CHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCC
Q 007619 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLN 193 (595)
Q Consensus 125 ~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~ 193 (595)
+++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.|++.|.+++..
T Consensus 69 -~~~f~~ll~~iYtg~~~~~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 69 -AEIFGLLLDFFYTGHLALTSGN--------------------RDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp -HHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred -HHHHHHHHHHHcCCCCccCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 4599999999999999877544 78999999999999999999998865
No 99
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.83 E-value=2.3e-20 Score=166.37 Aligned_cols=114 Identities=24% Similarity=0.328 Sum_probs=101.8
Q ss_pred cCChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeee-cccccCC
Q 007619 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLM-TELVPYG 122 (595)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l-~~l~~~~ 122 (595)
..+.+.+.++|.+++.++ .+|||+|+++|+.|+|||+||++||+||++||.+++.|. ...|.| .+
T Consensus 10 ~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~-------~~~i~l~~~----- 75 (127)
T 1r29_A 10 TRHASDVLLNLNRLRSRD--ILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRN-------LSVINLDPE----- 75 (127)
T ss_dssp TTHHHHHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTT-------CSEEECCTT-----
T ss_pred hhHHHHHHHHHHHHHhcC--CCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccCC-------CCEEEeCCC-----
Confidence 357889999999999999 999999999999999999999999999999999988753 468888 66
Q ss_pred cCCHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCC
Q 007619 123 KVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLL 192 (595)
Q Consensus 123 ~v~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~ 192 (595)
+++++|+.+|+|+|||++.+.+.+ +.+++.+|.+|+++.|++.|.+++.
T Consensus 76 -~~~~~f~~ll~~~Ytg~~~~~~~~--------------------~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 76 -INPEGFNILLDFMYTSRLNLREGN--------------------IMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp -SCHHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHcCCCcCcCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 566699999999999999876544 7899999999999999999998764
No 100
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=5.8e-21 Score=189.57 Aligned_cols=109 Identities=27% Similarity=0.334 Sum_probs=102.6
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCChHHHHHH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN-ARGHTVLHVAA 344 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d-~~G~TpLh~Aa 344 (595)
+..|.||||+|+..|+.++|++|++ | ++ |..|+||||+|+..|+.+++++||..| +++|.++ ..|+||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHH
Confidence 4578999999999999999999999 7 54 478999999999999999999999998 9999998 88999999999
Q ss_pred HcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcC
Q 007619 345 RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMT 380 (595)
Q Consensus 345 ~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~ 380 (595)
..|+.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREIL 155 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH
Confidence 999999999999999999999999999999999754
No 101
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.83 E-value=1.7e-20 Score=169.03 Aligned_cols=115 Identities=23% Similarity=0.338 Sum_probs=97.5
Q ss_pred cCChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCc
Q 007619 44 NLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGK 123 (595)
Q Consensus 44 ~~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~ 123 (595)
..+.+.+.++|.+++.++ .+|||+|+|+|+.|+|||+||+++|+||++||.+++ ..+|.|+++.
T Consensus 6 ~~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----------~~~i~l~~~~---- 69 (135)
T 2yy9_A 6 SGHSVRVLQELNKQREKG--QYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----------GGSVVLPAGF---- 69 (135)
T ss_dssp -CHHHHHHHHHHHHHHTT--TTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------------CCEEECGGG----
T ss_pred ccHHHHHHHHHHHHHhcC--CCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----------CCeEEeCCCC----
Confidence 457889999999999999 999999999999999999999999999999998865 2468888754
Q ss_pred CCHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchh
Q 007619 124 VGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (595)
Q Consensus 124 v~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~ 196 (595)
+++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.|++.|.+++.....
T Consensus 70 --~~~f~~lL~fiYtg~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 70 --AEIFGLLLDFFYTGHLALTSGN--------------------RDQVLLAAKELRVPEAVELCQSFQPQTSV 120 (135)
T ss_dssp --HHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHCCC----
T ss_pred --HHHHHHHHHHHhCCCCCCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHHhcc
Confidence 4599999999999999877544 78999999999999999999999877654
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=3.6e-20 Score=154.98 Aligned_cols=92 Identities=30% Similarity=0.369 Sum_probs=78.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcC
Q 007619 301 DDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMT 380 (595)
Q Consensus 301 ~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~ 380 (595)
+|+||||+|+..|+.+++++|+..| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4788888888888888888888887 888888888888888888888888888888888888888888888888888888
Q ss_pred ChhhHHHHHHcCC
Q 007619 381 RRKDYIEATKQGQ 393 (595)
Q Consensus 381 ~~~~v~~l~~~g~ 393 (595)
+.++++.|++.|+
T Consensus 80 ~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 80 HLEVVKLLLEAGA 92 (93)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 8888888888875
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=6.9e-20 Score=185.69 Aligned_cols=124 Identities=18% Similarity=0.218 Sum_probs=116.2
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHCC-CC---------CCCCchHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCCh
Q 007619 272 KRVRRIHKALDSDDVELLKLLLDES-NV---------TLDDAYALHYAAAY---CNPKVFKEVLNMGLADLNLKNARGHT 338 (595)
Q Consensus 272 ~g~tpLh~A~~~g~~e~v~~LL~~g-~i---------n~~G~tpLh~Aa~~---g~~~~v~~LL~~~~advn~~d~~G~T 338 (595)
...++|+.|+..|+.+.+..++..| ++ +..|.||||+|+.. |+.+++++||..| +++|.+|..|+|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~T 207 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCC
Confidence 3468999999999999999999999 53 46799999999999 8999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCch
Q 007619 339 VLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (595)
Q Consensus 339 pLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (595)
|||+|+..|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|++.|+...
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999987543
No 104
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.81 E-value=5.4e-20 Score=161.25 Aligned_cols=110 Identities=20% Similarity=0.322 Sum_probs=96.7
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeec--ccccCC
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMT--ELVPYG 122 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~--~l~~~~ 122 (595)
.+.+.+.++|.+++.++ .+|||+|+++|+.|+|||+||++||+||++||.++ . ...|.|. +
T Consensus 4 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-~---------~~~i~l~~~~----- 66 (116)
T 2vpk_A 4 HHCEHLLERLNKQREAG--FLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST-S---------ENNVFLDQSQ----- 66 (116)
T ss_dssp HHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC-C---------CSCEECCTTT-----
T ss_pred hHHHHHHHHHHHHHhcC--CCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC-C---------CCeEEeecCC-----
Confidence 36788999999999999 99999999999999999999999999999999876 1 2356666 5
Q ss_pred cCCHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCC
Q 007619 123 KVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLL 192 (595)
Q Consensus 123 ~v~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~ 192 (595)
+++++|+.+|+|+|||++.+.+.+ +.+++.+|.+|+++.|++.|.+++.
T Consensus 67 -~~~~~f~~ll~~~Yt~~~~~~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 67 -VKADGFQKLLEFIYTGTLNLDSWN--------------------VKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp -CCHHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred -CCHHHHHHHHHHHcCCCcccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 566699999999999999876544 7899999999999999999998754
No 105
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.81 E-value=2.9e-20 Score=163.74 Aligned_cols=109 Identities=20% Similarity=0.298 Sum_probs=96.9
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcC
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v 124 (595)
.+.+.+.++|.+++.++ .+|||+|+++|+.|+|||+||++||+||++||.+. ...|.+++ +
T Consensus 9 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----------~~~i~l~~------~ 69 (119)
T 2q81_A 9 QHSQHVLEQLNQQRQLG--LLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----------KDVVHLDI------S 69 (119)
T ss_dssp HHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----------CSGGGGGG------C
T ss_pred hHHHHHHHHHHHHHhcC--CCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----------CCEEEeCC------C
Confidence 56788999999999999 99999999999999999999999999999999872 24677766 5
Q ss_pred CHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCC
Q 007619 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLL 192 (595)
Q Consensus 125 ~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~ 192 (595)
++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.+++.|.+++.
T Consensus 70 ~~~~f~~ll~~~Ytg~~~i~~~~--------------------~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 70 NAAGLGQVLEFMYTAKLSLSPEN--------------------VDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CHHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCCCccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 56699999999999999877544 7899999999999999999988753
No 106
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.81 E-value=8.2e-21 Score=180.82 Aligned_cols=126 Identities=15% Similarity=0.062 Sum_probs=111.4
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHCC--CCC-CCCchHHHHHHHcCCH----HHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 007619 273 RVRRIHKALDSDDVELLKLLLDES--NVT-LDDAYALHYAAAYCNP----KVFKEVLNMGLADLNLKNARGHTVLHVAAR 345 (595)
Q Consensus 273 g~tpLh~A~~~g~~e~v~~LL~~g--~in-~~G~tpLh~Aa~~g~~----~~v~~LL~~~~advn~~d~~G~TpLh~Aa~ 345 (595)
++++|+.|+..|+.+.++.++..+ ..+ ..|+||||+|+..|+. +++++||..| |+||.+|..|+||||+|+.
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G-advn~~d~~g~TpLh~a~~ 84 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG-ADIKSRTKEGTTLFFPLFQ 84 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT-CCSSCCCTTCCCTHHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHH
Confidence 568999999999999999999988 334 6699999999999975 4899999987 9999999999999999999
Q ss_pred cCC------HHHHHHHHhCCCCccccCCCCC-cHHHHHHHcCC-----hhhHHHHHH-cCCCchhhc
Q 007619 346 RKE------PAVLVTLLSKGACASETTSDGQ-TAVAICRRMTR-----RKDYIEATK-QGQETNKDR 399 (595)
Q Consensus 346 ~~~------~~iv~~LL~~Gad~n~~d~~G~-TpL~~A~~~~~-----~~~v~~l~~-~g~~~~~~~ 399 (595)
.++ .+++++||++||++|.+|..|+ ||||+|+..+. .+++++|++ .|.++....
T Consensus 85 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d 151 (186)
T 3t8k_A 85 GGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD 151 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCC
T ss_pred cCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccC
Confidence 987 5789999999999999999999 99999999654 358888888 888766433
No 107
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.81 E-value=3.2e-20 Score=164.03 Aligned_cols=109 Identities=23% Similarity=0.379 Sum_probs=97.2
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcC
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v 124 (595)
.+.+.+.++|.+++.++ .+|||+|+++|+.|+|||+||++||+||++||.++ ..+|.+++ +
T Consensus 10 ~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----------~~~i~l~~------~ 70 (121)
T 1buo_A 10 SHPTGLLCKANQMRLAG--TLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----------SQHYTLDF------L 70 (121)
T ss_dssp THHHHHHHHHHHHHHHT--TTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----------CSEEEECS------S
T ss_pred chHHHHHHHHHHHHhcC--CCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----------CcEEEeCC------C
Confidence 46789999999999999 99999999999999999999999999999999762 34788887 5
Q ss_pred CHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCC
Q 007619 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLL 192 (595)
Q Consensus 125 ~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~ 192 (595)
++++|+.+|+|+|||++.+.+.+ +.+++.+|.+|+++.+++.|.+++.
T Consensus 71 ~~~~f~~ll~~~Ytg~~~~~~~~--------------------~~~ll~~A~~~~i~~L~~~c~~~l~ 118 (121)
T 1buo_A 71 SPKTFQQILEYAYTATLQAKAED--------------------LDDLLYAAEILEIEYLEEQCLKMLE 118 (121)
T ss_dssp CHHHHHHHHHHHHHSCCCCCGGG--------------------HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhcCCCcCCCHHH--------------------HHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 55699999999999999876533 7899999999999999999988764
No 108
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.81 E-value=8.4e-21 Score=168.73 Aligned_cols=113 Identities=22% Similarity=0.274 Sum_probs=98.9
Q ss_pred ccCChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCC
Q 007619 43 DNLSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYG 122 (595)
Q Consensus 43 ~~~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~ 122 (595)
+..+.+.+.+.|.+++.++ .+|||+|+|+|+.|+|||+||+++|+||++||.+.+.+. ..|.+.+
T Consensus 12 ~~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--------~~i~l~~----- 76 (125)
T 3ohu_A 12 STVHCTNILLGLNDQRKKD--ILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKND--------LVVSLPE----- 76 (125)
T ss_dssp CSSHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCSS--------CEEECCT-----
T ss_pred cHHHHHHHHHHHHHHHhcC--CccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCCC--------cEEEeCC-----
Confidence 3467889999999999999 999999999999999999999999999999999887643 5788876
Q ss_pred cCCHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHc
Q 007619 123 KVGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRR 190 (595)
Q Consensus 123 ~v~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~ 190 (595)
++++++|+.+|+|+|||++.+...+ +.+++.+|..|+++.|++.|.++
T Consensus 77 ~~~~~~f~~~l~~iYtg~~~~~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 77 EVTARGFGPLLQFAYTAKLLLSREN--------------------IREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp TCCHHHHHHHHHHHTTSEEEECTTT--------------------HHHHHHHHHHHTBSSCTTSSCCC
T ss_pred CCCHHHHHHHHHhHcCCceEECHHH--------------------HHHHHHHHHHhCCHHHHHHHHHh
Confidence 2555699999999999999776544 78999999999999998888665
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.81 E-value=1.2e-19 Score=199.15 Aligned_cols=125 Identities=22% Similarity=0.242 Sum_probs=113.9
Q ss_pred CcHHHHHHhcCCHHHHHHHHHCC-CC---------CCCCchHHHHHHH---cCCHHHHHHHHHcCCCCccccCCCCChHH
Q 007619 274 VRRIHKALDSDDVELLKLLLDES-NV---------TLDDAYALHYAAA---YCNPKVFKEVLNMGLADLNLKNARGHTVL 340 (595)
Q Consensus 274 ~tpLh~A~~~g~~e~v~~LL~~g-~i---------n~~G~tpLh~Aa~---~g~~~~v~~LL~~~~advn~~d~~G~TpL 340 (595)
.+.||.|+..|+.++|+.||+.| ++ +..|+||||+|+. .|+.+++++||..| +++|.+|..|+|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCcHH
Confidence 47899999999999999999999 65 4579999999976 89999999999998 99999999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCchhhc
Q 007619 341 HVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETNKDR 399 (595)
Q Consensus 341 h~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~~~~ 399 (595)
|+|+..|+.+++++||++||+++.+|.+|+||||+|+..|+.+++++|++.|++++...
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFP 270 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999998877543
No 110
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.80 E-value=1.4e-20 Score=167.14 Aligned_cols=112 Identities=21% Similarity=0.283 Sum_probs=96.8
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcC
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v 124 (595)
.+.+.+.++|.+++.++ .+|||+|+++|+.|+|||+||++||+||++||.+++.++ ..|.+++ ++
T Consensus 11 ~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--------~~i~l~~-----~v 75 (124)
T 2ihc_A 11 VHSTNVLLSLNDQRKKD--VLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--------LNITLPE-----EV 75 (124)
T ss_dssp SHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--------EEEECCT-----TS
T ss_pred chHHHHHHHHHHHHhcC--CCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--------ceEeecC-----Cc
Confidence 56788999999999999 999999999999999999999999999999999988754 4677741 36
Q ss_pred CHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcC
Q 007619 125 GYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRL 191 (595)
Q Consensus 125 ~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l 191 (595)
++++|+.+|+|+|||++.+...+ +.+++.+|.+|+++.|++.|.+++
T Consensus 76 ~~~~f~~lL~~iYtg~~~i~~~~--------------------v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 76 TVKGFEPLIQFAYTAKLILSKEN--------------------VDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp CHHHHHHHHHHHHHSEEEEETTT--------------------HHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred CHHHHHHHHHHhcCCCcccCHHH--------------------HHHHHHHHHHHCCHHHHHHHHHHH
Confidence 77799999999999998776544 789999999999999999998875
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.80 E-value=1.8e-19 Score=189.58 Aligned_cols=123 Identities=18% Similarity=0.155 Sum_probs=115.8
Q ss_pred CCCCCcHHHHHHhc-CCHHHHHHHHHCC-CCC-----CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHH
Q 007619 270 HAKRVRRIHKALDS-DDVELLKLLLDES-NVT-----LDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHV 342 (595)
Q Consensus 270 d~~g~tpLh~A~~~-g~~e~v~~LL~~g-~in-----~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~ 342 (595)
+..+.|+||+|+.. |+.++++.||+.| ++| ..|.||||+|+..|+.+++++||..| +++|.+|..|+||||+
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpLh~ 274 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPLHH 274 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHH
Confidence 44567999999999 9999999999999 654 67999999999999999999999997 9999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCC
Q 007619 343 AARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 393 (595)
Q Consensus 343 Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~ 393 (595)
|+..|+.+++++||++||+++.+|.+|+||||+|+..++.+++.+|...|.
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999998874
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=6.3e-20 Score=159.53 Aligned_cols=104 Identities=25% Similarity=0.304 Sum_probs=96.2
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 007619 269 MHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAA 344 (595)
Q Consensus 269 ~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa 344 (595)
+|.+|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHH
Confidence 4889999999999999999999999999 54 578999999999999999999999997 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCccccCCCCCcHH
Q 007619 345 RRKEPAVLVTLLSKGACASETTSDGQTAV 373 (595)
Q Consensus 345 ~~~~~~iv~~LL~~Gad~n~~d~~G~TpL 373 (595)
..|+.+++++|+++||++|.++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999984
No 113
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=2.4e-19 Score=149.90 Aligned_cols=89 Identities=36% Similarity=0.472 Sum_probs=83.6
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 007619 272 KRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRK 347 (595)
Q Consensus 272 ~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~ 347 (595)
+|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999999 55 578999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCC
Q 007619 348 EPAVLVTLLSKGAC 361 (595)
Q Consensus 348 ~~~iv~~LL~~Gad 361 (595)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999986
No 114
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.80 E-value=8.3e-20 Score=158.09 Aligned_cols=101 Identities=18% Similarity=0.319 Sum_probs=85.1
Q ss_pred HHccCCCCccCeEEEEcC----eEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHH
Q 007619 57 LLLDAEHDYTDADIVVEG----KSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVI 132 (595)
Q Consensus 57 l~~~~~~~~sDv~i~v~g----~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~l 132 (595)
+++++ .+|||+|+++| +.|+|||+||++||+||++||.++|.|+ . ..|.++++ ++++|+.+
T Consensus 2 l~~~~--~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~------~-~~i~l~~~------~~~~f~~~ 66 (109)
T 2vkp_A 2 MFNNE--LMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV------K-SEIHIPDV------EPAAFLIL 66 (109)
T ss_dssp CTTCC--TTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------------C-CEEEETTS------CHHHHHHH
T ss_pred cccCC--CcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC------C-CeEEeCCC------CHHHHHHH
Confidence 56778 99999999998 8999999999999999999999999887 5 78999874 55599999
Q ss_pred hhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCC
Q 007619 133 LYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLL 192 (595)
Q Consensus 133 L~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~ 192 (595)
|+|+|||++.+.+.+ +.+++.+|.+|+++.|++.|.+++.
T Consensus 67 l~~iYt~~~~~~~~~--------------------~~~ll~~A~~~~~~~L~~~c~~~l~ 106 (109)
T 2vkp_A 67 LKYMYSDEIDLEADT--------------------VLATLYAAKKYIVPALAKACVNFLE 106 (109)
T ss_dssp HHHHHHCCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCCccCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 999999999877544 7899999999999999999998764
No 115
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.80 E-value=2.6e-19 Score=183.52 Aligned_cols=121 Identities=21% Similarity=0.271 Sum_probs=113.2
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHCC-CC---------CCCCchHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCCh
Q 007619 272 KRVRRIHKALDSDDVELLKLLLDES-NV---------TLDDAYALHYAAAY---CNPKVFKEVLNMGLADLNLKNARGHT 338 (595)
Q Consensus 272 ~g~tpLh~A~~~g~~e~v~~LL~~g-~i---------n~~G~tpLh~Aa~~---g~~~~v~~LL~~~~advn~~d~~G~T 338 (595)
.+.++||.|+..|+.+.++.|++.| ++ +..|.||||+|+.. |+.+++++||..| +++|.+|..|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCCCCCCC
Confidence 3457899999999999999999999 54 55899999999997 8999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCC
Q 007619 339 VLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQ 393 (595)
Q Consensus 339 pLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~ 393 (595)
|||+|+..|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|++.|.
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 283 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999998764
No 116
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.79 E-value=2.5e-19 Score=157.15 Aligned_cols=99 Identities=33% Similarity=0.443 Sum_probs=92.1
Q ss_pred ccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Q 007619 259 CEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNA 334 (595)
Q Consensus 259 ~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~ 334 (595)
+|++++.. +..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..| ++++.+|.
T Consensus 24 ~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~ 99 (126)
T 1n0r_A 24 AGADVNAK---DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDK 99 (126)
T ss_dssp HTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCT
T ss_pred cCCCCCCc---CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCcccCC
Confidence 46676666 889999999999999999999999999 54 578999999999999999999999998 99999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCC
Q 007619 335 RGHTVLHVAARRKEPAVLVTLLSKGAC 361 (595)
Q Consensus 335 ~G~TpLh~Aa~~~~~~iv~~LL~~Gad 361 (595)
.|+||||+|+..|+.+++++|+++|||
T Consensus 100 ~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 100 NGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999986
No 117
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.79 E-value=4.6e-20 Score=189.18 Aligned_cols=106 Identities=22% Similarity=0.257 Sum_probs=93.0
Q ss_pred CCCCCcHHHHHHhc---CCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHH
Q 007619 270 HAKRVRRIHKALDS---DDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHV 342 (595)
Q Consensus 270 d~~g~tpLh~A~~~---g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~ 342 (595)
+..|.||||+|+.. |+.+++++||+.| ++ |..|+||||+|+..|+.+++++||..| ++++.+|..|+||||+
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDI 265 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHH
T ss_pred CCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHH
Confidence 78899999999997 8999999999999 55 478999999999999999999999997 9999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCCh
Q 007619 343 AARRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRR 382 (595)
Q Consensus 343 Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~ 382 (595)
|+..|+.+++++|+++|++ .|.||||+|+..|+.
T Consensus 266 A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 266 ARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 9999999999999999987 589999999998864
No 118
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.79 E-value=1.2e-20 Score=199.28 Aligned_cols=168 Identities=13% Similarity=0.008 Sum_probs=133.5
Q ss_pred cChHHHHHHHHHcCCCchhhcccCCcHHHHHHHHHcChHHHHhchhhccccCCCCcccccccCCcchHHHHHHHHhhhcc
Q 007619 178 FQMKELVLLFQRRLLNFVEKALVEDVIPILVAAFHCQLNQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLRVKSDE 257 (595)
Q Consensus 178 ~~l~~L~~l~~~~l~~~~~k~~~~n~~t~L~~A~~~~~~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL~~~~~ 257 (595)
++.+++.+++...+.+ +.||||+|+..|...+++..++
T Consensus 76 ~~~~~~~~~l~~~g~~---------~~T~Lh~Aa~~G~~e~v~~Ll~--------------------------------- 113 (376)
T 2aja_A 76 RNAKQLWSDAHKKGIK---------SEVICFVAAITGCSSALDTLCL--------------------------------- 113 (376)
T ss_dssp TTCTTHHHHHHHHTCC---------HHHHHHHHHHHCCHHHHHHHTT---------------------------------
T ss_pred CCCHHHHHHHHHcCCC---------cCCHHHHHHHcCCHHHHHHHHH---------------------------------
Confidence 5677777777766544 3588888888887544433322
Q ss_pred cccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-C-----CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccc
Q 007619 258 ECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-N-----VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNL 331 (595)
Q Consensus 258 ~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~-----in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~ 331 (595)
+|+.....+..+..|.||||+|+..|+.++|++|+++| + ++..++||||+||..|+.+++++|+..| ++++.
T Consensus 114 -~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~g-a~~~~ 191 (376)
T 2aja_A 114 -LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELA-PTEAT 191 (376)
T ss_dssp -C--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSC-GGGHH
T ss_pred -cCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcC-Cccch
Confidence 12211111112567889999999999999999999999 4 3333499999999999999999999998 99988
Q ss_pred --cCCCCChHHHHHH-HcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHHcCChhhHHHHHHcCCCch
Q 007619 332 --KNARGHTVLHVAA-RRKEPAVLVTLLSKGACASETTSDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (595)
Q Consensus 332 --~d~~G~TpLh~Aa-~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (595)
+|..|+||||+|+ .+|+.++|++|+++|++ |.||||+|+..|+.+++++|.+.|....
T Consensus 192 ~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~~ 252 (376)
T 2aja_A 192 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNRLK 252 (376)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHHH
T ss_pred hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 8999999999999 99999999999998853 8999999999999999999999886543
No 119
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.79 E-value=2.1e-19 Score=161.31 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=89.9
Q ss_pred ccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Q 007619 259 CEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNA 334 (595)
Q Consensus 259 ~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~ 334 (595)
+|++++.. |..|+||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.++++.|+..| ++++.+|.
T Consensus 36 ~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~ 111 (136)
T 2jab_A 36 NGADVNAK---DEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG-ADVNAQDK 111 (136)
T ss_dssp TTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCT
T ss_pred cCCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcCcCC
Confidence 46777766 889999999999999999999999999 54 578999999999999999999999997 99999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCC
Q 007619 335 RGHTVLHVAARRKEPAVLVTLLSKG 359 (595)
Q Consensus 335 ~G~TpLh~Aa~~~~~~iv~~LL~~G 359 (595)
.|+||||+|+..|+.+++++|+++|
T Consensus 112 ~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 112 FGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999986
No 120
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.77 E-value=1.3e-19 Score=161.86 Aligned_cols=112 Identities=26% Similarity=0.408 Sum_probs=93.4
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeec-ccccCCc
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMT-ELVPYGK 123 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~-~l~~~~~ 123 (595)
.+.+.+.+.|.+++.++ .+|||+|.|+|+.|+|||+||+++|+||++||.++ ....|.|+ +
T Consensus 15 ~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----------~~~~i~l~~~------ 76 (129)
T 3ga1_A 15 NFGNSILECLNEQRLQG--LYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----------RSAVVELPAA------ 76 (129)
T ss_dssp THHHHHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----------CCSEEECCTT------
T ss_pred cHHHHHHHHHHHHHhcC--CCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----------CCCEEEECCC------
Confidence 56788999999999999 99999999999999999999999999999999886 23578885 5
Q ss_pred CCHHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCc
Q 007619 124 VGYEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNF 194 (595)
Q Consensus 124 v~~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~ 194 (595)
+++++|+.+|+|+|||++.+...+ +.+++.+|..|+++.+++.|.+++...
T Consensus 77 ~~~~~f~~ll~~iYtg~~~i~~~~--------------------~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 77 VQPQSFQQILSFCYTGRLSMNVGD--------------------QDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp CCHHHHHHHHHHHHHSEEECCTTT--------------------HHHHHHHHHHTTBTTSSCC--------
T ss_pred CCHHHHHHHHHHHhCCccccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 566699999999999999877544 789999999999999999999887653
No 121
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.77 E-value=1.5e-18 Score=155.67 Aligned_cols=99 Identities=20% Similarity=0.155 Sum_probs=94.9
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHH
Q 007619 298 VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICR 377 (595)
Q Consensus 298 in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~ 377 (595)
.|..|+||||+|+..|+.+++++||..| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 4688999999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred HcCChhhHHHHHHcCCCchh
Q 007619 378 RMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 378 ~~~~~~~v~~l~~~g~~~~~ 397 (595)
..|+.++++.|++.|.++..
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~ 104 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNA 104 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTC
T ss_pred HcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999987654
No 122
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.76 E-value=1e-18 Score=153.10 Aligned_cols=102 Identities=25% Similarity=0.367 Sum_probs=89.8
Q ss_pred CChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcC
Q 007619 45 LSLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKV 124 (595)
Q Consensus 45 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v 124 (595)
.+.+.+.+.|.+++.++ .+|||+|.++|+.|+|||+||+++|+||++||.++ ...|.+++ +
T Consensus 13 ~~~~~l~~~l~~~~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----------~~~i~l~~------~ 73 (116)
T 3fkc_A 13 QYSGSLLNSLNEQRGHG--LFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----------GQVVELSF------I 73 (116)
T ss_dssp THHHHHHHHHHHHHHHT--TTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----------CSEEEECS------S
T ss_pred cHHHHHHHHHHHHHhcC--CceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----------CCEEEeCC------C
Confidence 46788999999999999 99999999999999999999999999999999874 34788877 4
Q ss_pred CHHHHHHHhhHhccCCC-CCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHH
Q 007619 125 GYEAFNVILYYFYTGKL-KPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVL 185 (595)
Q Consensus 125 ~~~~f~~lL~ylYtg~l-~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~ 185 (595)
++++|+.+|+|+|||++ .+.. +.+.+++.+|..|+++.|.+
T Consensus 74 ~~~~f~~~l~~~Ytg~~~~~~~--------------------~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 74 RAEIFAEILNYIYSSKIVRVRS--------------------DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CHHHHHHHHHHHTTSCCCSCCH--------------------HHHHHHHHHHHHHTCHHHHT
T ss_pred CHHHHHHHHHhhcCCCcCCCCH--------------------HHHHHHHHHHHHhCccccCc
Confidence 55599999999999998 4442 55889999999999998864
No 123
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.75 E-value=8.2e-18 Score=147.98 Aligned_cols=99 Identities=18% Similarity=0.098 Sum_probs=91.8
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHH
Q 007619 298 VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICR 377 (595)
Q Consensus 298 in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~ 377 (595)
.+..|.||||+|+..|+.++++.|+..+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3467899999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred HcCChhhHHHHHHcCCCchh
Q 007619 378 RMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 378 ~~~~~~~v~~l~~~g~~~~~ 397 (595)
..++.++++.|++.|.++..
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~ 101 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTV 101 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTC
T ss_pred HcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999987653
No 124
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.75 E-value=1.3e-19 Score=191.39 Aligned_cols=121 Identities=12% Similarity=-0.008 Sum_probs=106.5
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHCCC-------CCCCCchHHHHHHHcCCHHHHHHHHHcCCCC---ccccCCCCChH
Q 007619 270 HAKRVRRIHKALDSDDVELLKLLLDESN-------VTLDDAYALHYAAAYCNPKVFKEVLNMGLAD---LNLKNARGHTV 339 (595)
Q Consensus 270 d~~g~tpLh~A~~~g~~e~v~~LL~~g~-------in~~G~tpLh~Aa~~g~~~~v~~LL~~~~ad---vn~~d~~G~Tp 339 (595)
+.++.||||+|+..|+.++|++|++.|. +|..|.||||+||.+|+.+++++|+..| ++ ++..+.+ +||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~g-ad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELA-PTEIMAMIQAEN-YHA 166 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSC-TTTHHHHHSHHH-HHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCC-CCccccccCCCC-CCH
Confidence 4456699999999999999999999982 3467899999999999999999999998 76 2333333 999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCccc--cCCCCCcHHHHHH-HcCChhhHHHHHHcC
Q 007619 340 LHVAARRKEPAVLVTLLSKGACASE--TTSDGQTAVAICR-RMTRRKDYIEATKQG 392 (595)
Q Consensus 340 Lh~Aa~~~~~~iv~~LL~~Gad~n~--~d~~G~TpL~~A~-~~~~~~~v~~l~~~g 392 (595)
||+|+..|+.++|++|+++|++++. .|..|+||||+|+ ..|+.++++.|++.|
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred HHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 9999999999999999999999988 8999999999999 999999999999876
No 125
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.74 E-value=3.1e-18 Score=148.75 Aligned_cols=100 Identities=27% Similarity=0.376 Sum_probs=95.9
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHH
Q 007619 298 VTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAICR 377 (595)
Q Consensus 298 in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~ 377 (595)
.|.+|+||||+|+..|+.++++.|+..+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 4789999999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred HcCChhhHHHHHHcCCCchhh
Q 007619 378 RMTRRKDYIEATKQGQETNKD 398 (595)
Q Consensus 378 ~~~~~~~v~~l~~~g~~~~~~ 398 (595)
..++.++++.|++.|++++..
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~ 104 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNAR 104 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCcC
Confidence 999999999999999987653
No 126
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.73 E-value=5.4e-18 Score=185.84 Aligned_cols=102 Identities=23% Similarity=0.291 Sum_probs=85.9
Q ss_pred CCCCCcHHHHHHh---cCCHHHHHHHHHCC-CCC---CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHH
Q 007619 270 HAKRVRRIHKALD---SDDVELLKLLLDES-NVT---LDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHV 342 (595)
Q Consensus 270 d~~g~tpLh~A~~---~g~~e~v~~LL~~g-~in---~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~ 342 (595)
+..|.||||+|+. .|+.++|++||++| ++| ..|+||||+|+..|+.+++++||..| |++|.+|..|+||||+
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~ 246 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDI 246 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHH
Confidence 7789999999965 89999999999999 654 78999999999999999999999998 9999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHHHH
Q 007619 343 AARRKEPAVLVTLLSKGACASETTSDGQTAVAICRR 378 (595)
Q Consensus 343 Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A~~ 378 (595)
|+..|+.+++++|+++||+++. ||+|.+..
T Consensus 247 A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 247 ARKKHHKECEELLEQAQAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHTTCHHHHHHHHHTCC------------------
T ss_pred HHHcCCHHHHHHHHHhCCCCCC------Ccceeecc
Confidence 9999999999999999999987 46665544
No 127
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.73 E-value=9.2e-19 Score=170.46 Aligned_cols=108 Identities=14% Similarity=0.167 Sum_probs=85.1
Q ss_pred ccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHC-C-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccC
Q 007619 259 CEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDE-S-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKN 333 (595)
Q Consensus 259 ~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~-g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d 333 (595)
+|++++.. |..|+||||+|+..|+.++|++|++. | ++ |..|+||||+|+..|+.+++++||..| ++++.+|
T Consensus 95 ~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~ 170 (222)
T 3ehr_A 95 NRVGVNGL---DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKG-ARTDLRN 170 (222)
T ss_dssp TTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-CCSCCCC
T ss_pred CCCCcccc---CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccc
Confidence 46777766 88999999999999999999999999 7 54 588999999999999999999999997 9999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCC
Q 007619 334 ARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQ 370 (595)
Q Consensus 334 ~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~ 370 (595)
..|+||||+|+..++.++++.|+..|++.+..+.+|+
T Consensus 171 ~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 171 IEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp TTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 9999999999999999999999999999988776553
No 128
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.73 E-value=7.5e-19 Score=174.32 Aligned_cols=124 Identities=14% Similarity=0.097 Sum_probs=114.3
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHHCC-CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCH
Q 007619 271 AKRVRRIHKALDSDDVELLKLLLDES-NVTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEP 349 (595)
Q Consensus 271 ~~g~tpLh~A~~~g~~e~v~~LL~~g-~in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~ 349 (595)
..+.++++.++..|+.+.+..+...+ +++..|.||||+|+..|+.++++.||. + +++|.+|..|+||||+|+..|+.
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~d~~g~t~L~~A~~~g~~ 90 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-D-RDVDAVDENGRTALLFVAGLGSD 90 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHTTT-T-CCTTCBCTTSCBHHHHHHHHTCH
T ss_pred CCCccHHHHHHHcCCCcccccccccccccccCCCCHHHHHHHcCCHHHHHHHHc-C-CCCCCcCCCCCCHHHHHHHCCCH
Confidence 45668888888888888777777666 677899999999999999999999999 5 99999999999999999999999
Q ss_pred HHHHHHHhCCCCccccC-CCCCcHHHHHHHcCChhhHHHHHHcCCCch
Q 007619 350 AVLVTLLSKGACASETT-SDGQTAVAICRRMTRRKDYIEATKQGQETN 396 (595)
Q Consensus 350 ~iv~~LL~~Gad~n~~d-~~G~TpL~~A~~~~~~~~v~~l~~~g~~~~ 396 (595)
+++++|+++|+++|.++ ..|+||||+|+..|+.+++++|++.|.++.
T Consensus 91 ~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 138 (244)
T 3ui2_A 91 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE 138 (244)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 99999999999999998 889999999999999999999999998876
No 129
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.73 E-value=3.7e-18 Score=150.10 Aligned_cols=103 Identities=19% Similarity=0.175 Sum_probs=85.3
Q ss_pred ChhHHHHHHHHHHccCCCCccCeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCC
Q 007619 46 SLSKLSSNLEKLLLDAEHDYTDADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVG 125 (595)
Q Consensus 46 ~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~ 125 (595)
+...+.+.|. +.++ .+|||+|+|+|+.|+|||+|||++|+||++ ....|.+.+ |+
T Consensus 15 ~~~~~l~~l~--r~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------------~~~~i~l~~------v~ 69 (119)
T 3m5b_A 15 GSDRLVQLAA--RLRP--ALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------------RGQWALGEG------IS 69 (119)
T ss_dssp TTCHHHHHHH--HHTT--TTCCEEEEETTEEEEECHHHHHTTCGGGCC---------------CEEEECCSS------CC
T ss_pred chHHHHHHHH--HhcC--CCcceEEEECCEEEeeEHHHHHHcCHHHhc---------------CCCEEEeCC------CC
Confidence 4466777775 4567 899999999999999999999999999973 124677776 55
Q ss_pred HHHHHHHhhHhccCCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCC
Q 007619 126 YEAFNVILYYFYTGKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLN 193 (595)
Q Consensus 126 ~~~f~~lL~ylYtg~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~ 193 (595)
+++|+.+|+|+|||++.+...+ +.++|.+|..|++..+++.|.+...+
T Consensus 70 ~~~f~~ll~fiYtg~~~i~~~~--------------------v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 70 PSTFAQLLNFVYGESVELQPGE--------------------LRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHHHHTTCCEEECGGG--------------------HHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHcCCCcCcCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 6699999999999999776543 78999999999999999999987654
No 130
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1.3e-17 Score=144.11 Aligned_cols=91 Identities=26% Similarity=0.203 Sum_probs=81.2
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCcHHHHH
Q 007619 297 NVTLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETTSDGQTAVAIC 376 (595)
Q Consensus 297 ~in~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d~~G~TpL~~A 376 (595)
+++.+|.||||+|+..|+.++++.|+..| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 45688999999999999999999999887 99999999999999999999999999999999999999999999999999
Q ss_pred HHcCChhhHHHH
Q 007619 377 RRMTRRKDYIEA 388 (595)
Q Consensus 377 ~~~~~~~~v~~l 388 (595)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999888765
No 131
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.71 E-value=2.7e-17 Score=166.57 Aligned_cols=122 Identities=21% Similarity=0.223 Sum_probs=101.6
Q ss_pred cccccCCcchHHHHHHHHhhhcccccccccc---cCCCCCCCCcHHHHHHhc---CCHHHHHHHHHCC-CC---CCCCch
Q 007619 235 CLEKELPDEVSGEIKSLRVKSDEECEANIAE---VDPMHAKRVRRIHKALDS---DDVELLKLLLDES-NV---TLDDAY 304 (595)
Q Consensus 235 ~L~~al~~~~l~~ii~lL~~~~~~~Ga~~~~---~~~~d~~g~tpLh~A~~~---g~~e~v~~LL~~g-~i---n~~G~t 304 (595)
+++.++.......+..++ ..|++++. .+..+..|.||||+|+.. |+.+++++|+++| ++ |..|+|
T Consensus 133 ~l~~a~~~~d~~~~~~ll-----~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~T 207 (278)
T 1dcq_A 133 SLCEAVKTRDIFGLLQAY-----ADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHTTCHHHHHHHH-----HTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCC
T ss_pred hhhhHhhhcccHHHHHHH-----HhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCC
Confidence 344445444444444443 34666543 344588899999999999 8999999999999 55 478999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCc
Q 007619 305 ALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACA 362 (595)
Q Consensus 305 pLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~ 362 (595)
|||+|+..|+.++++.||..| |++|.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGK-ASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999987 999999999999999999999999999999999864
No 132
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.70 E-value=2.6e-17 Score=173.11 Aligned_cols=142 Identities=18% Similarity=0.159 Sum_probs=104.0
Q ss_pred CcccccccCCc-chHHHHHHHHhhhcccccccccccCCCCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHH
Q 007619 232 DDVCLEKELPD-EVSGEIKSLRVKSDEECEANIAEVDPMHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYAL 306 (595)
Q Consensus 232 ~~t~L~~al~~-~~l~~ii~lL~~~~~~~Ga~~~~~~~~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpL 306 (595)
..++++.++.. .. .++++.| +.+|++++..+. +..|.||||+|+..|+.++|++||++| ++ |..|+|||
T Consensus 199 ~~t~L~~Aa~~~g~-~~~v~~L----L~~Gadvn~~~~-~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL 272 (368)
T 3jue_A 199 PGALLFRASGHPPS-LPTMADA----LAHGADVNWVNG-GQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPL 272 (368)
T ss_dssp HHHHHHHHTSSSCC-HHHHHHH----HHTTCCTTCCCT-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCcHHHHHHHccCC-HHHHHHH----HHcCCCCCcccc-ccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 44567777766 66 4444444 346889988732 388999999999999999999999999 55 47899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCC---CCccccCCCCCcHHHHHHHcC
Q 007619 307 HYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKG---ACASETTSDGQTAVAICRRMT 380 (595)
Q Consensus 307 h~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~G---ad~n~~d~~G~TpL~~A~~~~ 380 (595)
|+|+..|+.+++++||..| ++++.+|..|+||||+|+..|+.+++++|+..| ++....+..+.|+++++....
T Consensus 273 h~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 9999999999999999998 999999999999999999999999999999765 455566778899999888654
No 133
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.70 E-value=3.9e-18 Score=161.20 Aligned_cols=97 Identities=16% Similarity=0.171 Sum_probs=92.2
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccC-CCCCcHHHHHH
Q 007619 299 TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAARRKEPAVLVTLLSKGACASETT-SDGQTAVAICR 377 (595)
Q Consensus 299 n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa~~~~~~iv~~LL~~Gad~n~~d-~~G~TpL~~A~ 377 (595)
+..|.||||+|+..|+.++++.||. + +++|.+|..|+||||+|+..|+.+++++|+++|+++|.++ ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-D-RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-T-SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-c-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4578999999999999999999999 5 9999999999999999999999999999999999999998 89999999999
Q ss_pred HcCChhhHHHHHHcCCCchh
Q 007619 378 RMTRRKDYIEATKQGQETNK 397 (595)
Q Consensus 378 ~~~~~~~v~~l~~~g~~~~~ 397 (595)
..|+.++++.|++.|.++..
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~ 138 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEV 138 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTC
T ss_pred hcCcHHHHHHHHHcCCCCcC
Confidence 99999999999999987653
No 134
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.63 E-value=7.1e-16 Score=133.14 Aligned_cols=86 Identities=20% Similarity=0.306 Sum_probs=80.3
Q ss_pred CCCCCCcHHHHHHhcCCHHHHHHHHHCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 007619 269 MHAKRVRRIHKALDSDDVELLKLLLDES-NV---TLDDAYALHYAAAYCNPKVFKEVLNMGLADLNLKNARGHTVLHVAA 344 (595)
Q Consensus 269 ~d~~g~tpLh~A~~~g~~e~v~~LL~~g-~i---n~~G~tpLh~Aa~~g~~~~v~~LL~~~~advn~~d~~G~TpLh~Aa 344 (595)
.+.+|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++||..| ++++.+|..|+||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCcHHHHHH
Confidence 3889999999999999999999999999 54 578999999999999999999999997 999999999999999999
Q ss_pred HcCCHHHHHHH
Q 007619 345 RRKEPAVLVTL 355 (595)
Q Consensus 345 ~~~~~~iv~~L 355 (595)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 135
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.88 E-value=3.4e-09 Score=97.51 Aligned_cols=116 Identities=17% Similarity=0.239 Sum_probs=78.2
Q ss_pred eEEEE-cCeEEeeehhhhhhcCHHHHHHHhc-CCC-CCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCC
Q 007619 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKK-GND-NDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPS 144 (595)
Q Consensus 68 v~i~v-~g~~~~aHr~ILaarS~~F~~mf~~-~~~-e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~ 144 (595)
|+|+. +|+.|.+||.+ |+.|+||++||.. ++. ++ ....|.|++ |+..++..|++|+|++.-...
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~------~~~~Ipl~~------V~~~iL~kViey~~~h~~~~~ 69 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEG------DDDPVPLPN------VNAAILKKVIQWCTHHKDDPP 69 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------------CEECTT------SCHHHHHHHHHHHHHTTTCCC
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccc------cCCCcCCCC------ccHHHHHHHHHHHHHcCcCCC
Confidence 66764 69999999999 8999999999987 555 44 446788887 555599999999999874432
Q ss_pred CCcccc----cccCCCCCcC--CCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchh
Q 007619 145 PSEVST----CVDDACAHDA--CPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (595)
Q Consensus 145 ~~~~~~----c~d~~c~h~~--c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~ 196 (595)
+..... ..+..+.-+. ..-..+.+++|+.+|+++++..|+.+|.+++++.+.
T Consensus 70 ~~~~~~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 70 PPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp -----------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred CcccccccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 211000 0000000000 001247899999999999999999999999887665
No 136
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.62 E-value=6.3e-08 Score=81.21 Aligned_cols=82 Identities=16% Similarity=0.250 Sum_probs=57.8
Q ss_pred eEEEE-cCeEEeeehhhhhhcCHHHHHHHhc--CCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhc-----c-
Q 007619 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKK--GNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFY-----T- 138 (595)
Q Consensus 68 v~i~v-~g~~~~aHr~ILaarS~~F~~mf~~--~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylY-----t- 138 (595)
|+++. +|++|.+||.+ |+.|+||++||.. ++.|+ ....|.|+++ +..+++.+++|+| +
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~------~~~~I~l~~V------~~~iL~kViey~~~h~~~~~ 70 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN------ETNEVNFREI------PSHVLSKVCMYFTYKVRYTN 70 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------------CEEECTTS------CHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCcccc------CCCceECCCC------CHHHHHHHHHHHHHhcccCC
Confidence 45554 69999999999 9999999999986 45554 4568888874 5559999999999 5
Q ss_pred --CCCCCCCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcC
Q 007619 139 --GKLKPSPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQ 179 (595)
Q Consensus 139 --g~l~~~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~ 179 (595)
+.++....+ .+.+.+||.+|+.++
T Consensus 71 ~~~~i~~~~i~-----------------~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 71 SSTEIPEFPIA-----------------PEIALELLMAANFLD 96 (97)
T ss_dssp CCSCCCCCCCC-----------------GGGHHHHHHHHHHHT
T ss_pred CcCCCCcCcCC-----------------HHHHHHHHHHHhhhC
Confidence 444421111 145899999999876
No 137
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.23 E-value=2.7e-06 Score=76.37 Aligned_cols=112 Identities=15% Similarity=0.184 Sum_probs=75.8
Q ss_pred eEEEE-cCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCCCC
Q 007619 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (595)
Q Consensus 68 v~i~v-~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~~~ 146 (595)
|+++. +|+.|.+||.+ |..|++|+.||.... . ..|.|++ |+..++..+++|+|...-...+.
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~--------~~Ipl~~------V~~~iL~kVieyc~~h~~~~~~~ 66 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG--M--------DPVPLPN------VNAAILKKVIQWCTHHKDDPPPP 66 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC--C--------SSEECTT------CCHHHHHHHHHHHHHHTTCC---
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC--C--------CceecCC------cCHHHHHHHHHHHHHhccCCCcc
Confidence 56665 68999999998 889999999998631 1 3677776 56669999999999866432211
Q ss_pred ccccc----ccCCCCC--cCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchh
Q 007619 147 EVSTC----VDDACAH--DACPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (595)
Q Consensus 147 ~~~~c----~d~~c~h--~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~ 196 (595)
....+ .++...- .=..-..+.+.+++.+|+++++..|+.+|.++.++.+.
T Consensus 67 ~~~~~~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 67 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp --------------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred ccccccccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc
Confidence 10000 0000000 00001247899999999999999999999999888765
No 138
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.03 E-value=6.7e-07 Score=82.11 Aligned_cols=113 Identities=16% Similarity=0.170 Sum_probs=49.0
Q ss_pred eEEEE-cCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCCCC
Q 007619 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (595)
Q Consensus 68 v~i~v-~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~~~ 146 (595)
|+|+. +|+.|.+||.+ |..|++|+.||..... ...|.|++ |+..++..|++|+|+..-...+.
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~---------~~~Ipl~~------V~~~iL~kVieyc~~h~~~~~~~ 69 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV---------DNGVPLPN------VTSKILAKVIEYCKRHVEAAASK 69 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------------CCTT------SCHHHHHHHHHC-----------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC---------CCceeCCc------CcHHHHHHHHHHHHHcccCCCcc
Confidence 56664 69999999998 8899999999976422 23566666 66669999999999876432111
Q ss_pred ccc-c----cccCCCCCcC--CCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchh
Q 007619 147 EVS-T----CVDDACAHDA--CPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (595)
Q Consensus 147 ~~~-~----c~d~~c~h~~--c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~ 196 (595)
... . ..+....-+. -.-..+.+.+|+.+|+++++..|+.+|.++.++.+.
T Consensus 70 ~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 70 AEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIK 126 (160)
T ss_dssp -------------------------------CHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred cccccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 000 0 0000000000 001135688999999999999999999998887665
No 139
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.63 E-value=0.00021 Score=60.63 Aligned_cols=96 Identities=20% Similarity=0.342 Sum_probs=69.2
Q ss_pred eEEEEcCeEEeeehhhhhhcC-HHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCCCC
Q 007619 68 ADIVVEGKSVAVHRCILSARS-QFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (595)
Q Consensus 68 v~i~v~g~~~~aHr~ILaarS-~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~~~ 146 (595)
|+|.|+|+.|...+..|+... .+|..||.+.+.-. ........+-+ |-.|. .|..||.|+.+|++..++
T Consensus 8 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~--~~~d~~~~~fi-DRdp~------~F~~IL~~lr~g~l~~p~- 77 (107)
T 3drz_A 8 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLD--SDKDETGAYLI-DRDPT------YFGPVLNYLRHGKLVINK- 77 (107)
T ss_dssp EEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGG--GGBCTTSCEEE-CSCHH------HHHHHHHHHHHSCCCCCT-
T ss_pred EEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCC--cCCCCCceEEe-cCChH------HHHHHHHHhCCCeeCCCC-
Confidence 678999999999999998765 47899987642110 00012234544 44444 999999999999987653
Q ss_pred cccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcC
Q 007619 147 EVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRL 191 (595)
Q Consensus 147 ~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l 191 (595)
+. | ...++.-|..|++.+|++.|.+..
T Consensus 78 ~~-------~-----------~~~l~~Ea~fy~l~~L~~~l~~~i 104 (107)
T 3drz_A 78 DL-------A-----------EEGVLEEAEFYNITSLIKLVKDKI 104 (107)
T ss_dssp TS-------C-----------HHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CC-------C-----------HHHHHHHHHHCCCHHHHHHHHHHH
Confidence 22 1 357889999999999999997643
No 140
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.52 E-value=0.00032 Score=58.63 Aligned_cols=93 Identities=12% Similarity=0.153 Sum_probs=62.3
Q ss_pred eEEEE-cCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCCCC
Q 007619 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (595)
Q Consensus 68 v~i~v-~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~~~ 146 (595)
|+++. +|..|.++|.+ |..|.+++.||..++ +. ....|.|++ |+..++..+++|+|..+-...+.
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~------~~~~Iplp~------V~~~iL~kVieyc~~h~~~~~~~ 71 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RE------SKGRIELKQ------FDSHILEKAVEYLNYNLKYSGVS 71 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TT------CTTEEEETT------SCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-cc------CCCceecCC------cCHHHHHHHHHHHHHhcccCCCc
Confidence 66665 79999999997 889999999998755 33 345788887 55559999999997643111000
Q ss_pred cccccccCCCCCcCCCchHHHHHHHHHHHHHcCh
Q 007619 147 EVSTCVDDACAHDACPPAINYAIELMYASAAFQM 180 (595)
Q Consensus 147 ~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l 180 (595)
...... ..+ .-..+.+.+|+.+|+++++
T Consensus 72 ~~~~~i-~~w-----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 72 EDDDEI-PEF-----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp SSCSSC-CCC-----CCCHHHHHHHHHHHHHHCC
T ss_pred cccccC-CCc-----cCCHHHHHHHHHHHHHhCc
Confidence 000000 001 1124789999999998764
No 141
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.39 E-value=0.00025 Score=58.92 Aligned_cols=90 Identities=16% Similarity=0.211 Sum_probs=57.6
Q ss_pred eEEEE-cCeEEeeehhhhhhcCHHHHHHHhcC-C-CCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCC-
Q 007619 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKKG-N-DNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKP- 143 (595)
Q Consensus 68 v~i~v-~g~~~~aHr~ILaarS~~F~~mf~~~-~-~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~- 143 (595)
|+++. +|..|.++|.+ |..|.+++.||... . .|+ ....|.|++ |+..+++.+++|+|...-..
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~------~~~~Ipl~~------V~~~iL~kVieyc~~h~~~~~ 69 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN------ETNEVNFRE------IPSHVLSKVCMYFTYKVRYTN 69 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------------CEEECSS------CCHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccc------cCCceeCCC------CCHHHHHHHHHHHHHccccCC
Confidence 45664 69999999997 88999999999853 2 333 335787777 55569999999997643110
Q ss_pred CCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcCh
Q 007619 144 SPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQM 180 (595)
Q Consensus 144 ~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l 180 (595)
...+.. .+ . -..+.+.+|+.+|+++++
T Consensus 70 ~~~~i~-----~w-~----vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 70 SSTEIP-----EF-P----IAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCSCCC-----CC-C----CCTTTHHHHHHHHHHHTC
T ss_pred CcccCC-----Cc-c----cCHHHHHHHHHHHHHhCc
Confidence 000000 01 0 012468999999998764
No 142
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=96.88 E-value=0.0027 Score=58.44 Aligned_cols=120 Identities=15% Similarity=0.167 Sum_probs=73.7
Q ss_pred eEEEE-cCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCCCC
Q 007619 68 ADIVV-EGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (595)
Q Consensus 68 v~i~v-~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~~~ 146 (595)
|+|+. +|..|.+++.+ |..|.+++.|+.....+. ........|.|++ |+..++..|++|+|..+-...+.
T Consensus 9 i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~--~~~~~~~~Iplpn------V~s~iL~kVieyc~~h~~~~~~~ 79 (169)
T 3v7d_A 9 VVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDD--DEDDDEIVMPVPN------VRSSVLQKVIEWAEHHRDSNFPD 79 (169)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-------------CEEECTT------CCHHHHHHHHHHHHHTTTCCCCC
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCccc--ccccCCCceeeCC------CCHHHHHHHHHHHHHcccCCCcc
Confidence 55554 59999999998 778999999998543210 0000225677776 55669999999997755433221
Q ss_pred c---ccccccCCCCCcC--CCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCchh
Q 007619 147 E---VSTCVDDACAHDA--CPPAINYAIELMYASAAFQMKELVLLFQRRLLNFVE 196 (595)
Q Consensus 147 ~---~~~c~d~~c~h~~--c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~~~ 196 (595)
. ...-.++...-+. -.-..+.+.+|+.+|.++++..|+.++....++.+.
T Consensus 80 ~~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ik 134 (169)
T 3v7d_A 80 EDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIR 134 (169)
T ss_dssp --------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHc
Confidence 0 0000000000000 001136789999999999999999999988877654
No 143
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.28 E-value=0.012 Score=55.11 Aligned_cols=99 Identities=19% Similarity=0.319 Sum_probs=71.0
Q ss_pred eEEEEcCeEEeeehhhhhhcC-HHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCCCC
Q 007619 68 ADIVVEGKSVAVHRCILSARS-QFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (595)
Q Consensus 68 v~i~v~g~~~~aHr~ILaarS-~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~~~ 146 (595)
|+|.|+|..|..-+..|.... .+|..||.+.+.-. ........+-| |=.|. .|..||.|+-+|++..++
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~--~~~De~geyFI-DRDP~------~F~~ILnyLRtG~L~lP~- 83 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLD--SDKDETGAYLI-DRDPT------YFGPVLNYLRHGKLVINK- 83 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC------BCTTCCEEE-CSCST------THHHHHHHHHHSCCCCCT-
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccC--cccCCCccEEe-cCChH------HHHHHHHHhcCCccCCCC-
Confidence 568899999999999998654 37888987643211 00112244544 55777 999999999999987653
Q ss_pred cccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHHHHHHHcCCCc
Q 007619 147 EVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELVLLFQRRLLNF 194 (595)
Q Consensus 147 ~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~~l~~~~l~~~ 194 (595)
+.+ ...++.-|..|++.+|++.|.+.+...
T Consensus 84 ~~~------------------~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 84 DLA------------------EEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp TSC------------------HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCC------------------HHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 221 346889999999999999998776443
No 144
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=95.81 E-value=0.012 Score=49.99 Aligned_cols=90 Identities=17% Similarity=0.235 Sum_probs=57.6
Q ss_pred eEEE-EcCeEEeeehhhhhhcCHHHHHHHhcCC--CCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCC-C
Q 007619 68 ADIV-VEGKSVAVHRCILSARSQFFHELFKKGN--DNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLK-P 143 (595)
Q Consensus 68 v~i~-v~g~~~~aHr~ILaarS~~F~~mf~~~~--~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~-~ 143 (595)
|+++ .+|..|.++|.+ |..|..++.|+.... .+. ....|.|++ |+..++..|++|+|...-. .
T Consensus 19 v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~------~~~~Iplpn------V~s~iL~kVieyc~~h~~~~~ 85 (112)
T 1vcb_B 19 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN------ETNEVNFRE------IPSHVLSKVCMYFTYKVRYTN 85 (112)
T ss_dssp EEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------------CEEECSS------CCHHHHHHHHHHHHHHHHHSS
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccc------cCCceeCCC------CCHHHHHHHHHHHHHhhhccC
Confidence 5666 469999999994 679999999997532 232 235677776 5556999999999653311 0
Q ss_pred CCCcccccccCCCCCcCCCchHHHHHHHHHHHHHcCh
Q 007619 144 SPSEVSTCVDDACAHDACPPAINYAIELMYASAAFQM 180 (595)
Q Consensus 144 ~~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l 180 (595)
...+. ..+ .-..+.+++|+.+|+++++
T Consensus 86 ~~~~i-----~~w-----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 86 SSTEI-----PEF-----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp CSSCC-----CCC-----CCCHHHHHHHHHHHHHHTC
T ss_pred CcCCC-----CCc-----ccCHHHHHHHHHHHHHhCc
Confidence 11110 001 1124789999999998764
No 145
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=92.15 E-value=0.17 Score=43.16 Aligned_cols=85 Identities=16% Similarity=0.154 Sum_probs=58.3
Q ss_pred eEEEEcCeEEeeehhhhhhcCH-HHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCCCC
Q 007619 68 ADIVVEGKSVAVHRCILSARSQ-FFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (595)
Q Consensus 68 v~i~v~g~~~~aHr~ILaarS~-~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~~~ 146 (595)
|+|.|||..|...+..|..... ++..||.....- ......+-| |=.|. .|..||.|+-+|++..++.
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~-----~~~~g~~Fi-DRdp~------~F~~ILnylR~G~l~~p~~ 74 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNY-----DPVLNEYFF-DRHPG------VFAQIINYYRSGKLHYPTD 74 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTE-----ETTTTEEEE-CSCTT------THHHHHHHHHHSCBCCCSS
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCC-----CCCCCcEEE-ecChH------HHHHHHHHhcCCCCCCCCc
Confidence 7789999999999999985532 345555432110 113345544 44666 9999999999999876542
Q ss_pred cccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHH
Q 007619 147 EVSTCVDDACAHDACPPAINYAIELMYASAAFQMKEL 183 (595)
Q Consensus 147 ~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L 183 (595)
++ ...++.-|..|++.+.
T Consensus 75 -~~------------------~~~~~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 75 -VC------------------GPLFEEELEFWGLDSN 92 (115)
T ss_dssp -SC------------------HHHHHHHHHHHTCCGG
T ss_pred -cc------------------HHHHHHHHHHhCCChH
Confidence 21 4578888999988653
No 146
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=91.08 E-value=0.26 Score=40.81 Aligned_cols=86 Identities=16% Similarity=0.235 Sum_probs=57.6
Q ss_pred eEEEEcCeEEeeehhhhhhcC-HHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhcc-CCCCCCC
Q 007619 68 ADIVVEGKSVAVHRCILSARS-QFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYT-GKLKPSP 145 (595)
Q Consensus 68 v~i~v~g~~~~aHr~ILaarS-~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYt-g~l~~~~ 145 (595)
|+|.|+|..|...+..|..-- ..+..|+.....- ......+-+ |=.|. .|..||.|+-+ |++..++
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~-----~~~~~eyFi-DRdp~------~F~~ILnflR~~G~l~~p~ 70 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYY-----DPLRNEYFF-DRNRP------SFDAILYFYQSGGRLRRPV 70 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGE-----ETTTTEEEE-CSCST------THHHHHHHHHTTSCCCCCT
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhcccccc-----CCCceeEEE-cCChH------HHHHHHHHHhcCCcccCCC
Confidence 678999999999999996432 1333444321100 012345555 44677 99999999998 8986553
Q ss_pred CcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHH
Q 007619 146 SEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELV 184 (595)
Q Consensus 146 ~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~ 184 (595)
+++ +..++.-|..|++.+++
T Consensus 71 -~~~------------------~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 71 -NVP------------------LDVFSEEIKFYELGENA 90 (100)
T ss_dssp -TSC------------------HHHHHHHHHHTTCCHHH
T ss_pred -CCC------------------HHHHHHHHHHcCCCHHH
Confidence 221 45788999999997644
No 147
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=86.24 E-value=0.4 Score=41.31 Aligned_cols=87 Identities=17% Similarity=0.194 Sum_probs=55.9
Q ss_pred CeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCCCC
Q 007619 67 DADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (595)
Q Consensus 67 Dv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~~~ 146 (595)
=|+|.|+|..|..-+..|..... .||....... .-......+-|+ = +...|..||.|+-+|++..++
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~--~~~~~~g~~FiD-R------dp~~F~~ILnflR~G~l~~p~- 80 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEF--FFNEDTKEYFFD-R------DPEVFRCVLNFYRTGKLHYPR- 80 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGG--TBCSSSCSEEEC-S------CHHHHHHHHHHHHHSCBCCCT-
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcc--cccCCCCcEEEc-C------ChHHHHHHHHHHhcCCCCCCC-
Confidence 37788999999999999975322 2343310000 001122344443 2 445999999999999987553
Q ss_pred cccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHH
Q 007619 147 EVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELV 184 (595)
Q Consensus 147 ~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~ 184 (595)
+++ +..++.-|..|++..++
T Consensus 81 ~~~------------------~~~l~~Ea~fy~i~~l~ 100 (124)
T 1s1g_A 81 YEC------------------ISAYDDELAFYGILPEI 100 (124)
T ss_dssp TSC------------------HHHHHHHHHHTTCCGGG
T ss_pred CcC------------------HHHHHHHHHHcCCChHH
Confidence 221 56788999999998763
No 148
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=82.87 E-value=0.73 Score=40.54 Aligned_cols=86 Identities=17% Similarity=0.192 Sum_probs=55.7
Q ss_pred CeEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCCCC
Q 007619 67 DADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPS 146 (595)
Q Consensus 67 Dv~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~~~ 146 (595)
=|+|.|+|..|...+..|.... ..||....... ........+-|+- +...|..||.|+-+|++..++
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~--~~~~~~g~yFiDR-------dp~~F~~ILnflR~G~l~~p~- 102 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEF--FFNEDTKEYFFDR-------DPEVFRCVLNFYRTGKLHYPR- 102 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGG--SEETTTTEEEECS-------CHHHHHHHHHHHHHSSBCCCT-
T ss_pred EEEEEECCEEEEeeHHHHhcCC---CeeecccCCcc--cccCCCCeEEEeC-------CcHHHHHHHHHHhcCCcCCCC-
Confidence 4778999999999999997532 22443310000 0011234554432 445999999999999987553
Q ss_pred cccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHH
Q 007619 147 EVSTCVDDACAHDACPPAINYAIELMYASAAFQMKEL 183 (595)
Q Consensus 147 ~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L 183 (595)
+++ +..++.-|..|++..+
T Consensus 103 ~~~------------------~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 103 YEC------------------ISAYDDELAFYGILPE 121 (140)
T ss_dssp TSC------------------HHHHHHHHHHHTCCGG
T ss_pred CcC------------------HHHHHHHHHHcCCChH
Confidence 221 5678889999998765
No 149
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=79.04 E-value=1.4 Score=36.72 Aligned_cols=85 Identities=19% Similarity=0.199 Sum_probs=54.9
Q ss_pred eEEEEcCeEEeeehhhhhhcCHHHHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhccCCCCCCCCc
Q 007619 68 ADIVVEGKSVAVHRCILSARSQFFHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYTGKLKPSPSE 147 (595)
Q Consensus 68 v~i~v~g~~~~aHr~ILaarS~~F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYtg~l~~~~~~ 147 (595)
|+|.|+|+.|...+..|..... .||....... .-......+-+ |=+|. .|..||.|+-+|++..++..
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~--~~~~~~~~~Fi-DRdp~------~F~~ILnflR~g~l~~p~~~ 69 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDF--FYHPETQQYFF-DRDPD------IFRHILNFYRTGKLHYPRHE 69 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGG--GEEGGGTEEEE-CSCTT------THHHHHHHHHHSCBCCCTTS
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcc--cccCCCCcEEE-eCCcH------HHHHHHHHHhcCCCCCCCCc
Confidence 6899999999999999975432 2333310000 00012234444 33666 99999999999998655321
Q ss_pred ccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHH
Q 007619 148 VSTCVDDACAHDACPPAINYAIELMYASAAFQMKEL 183 (595)
Q Consensus 148 ~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L 183 (595)
+ +..++.-|..|++..+
T Consensus 70 -~------------------~~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 70 -C------------------ISAYDEELAFFGLIPE 86 (105)
T ss_dssp -C------------------HHHHHHHHHHHTCCSC
T ss_pred -C------------------HHHHHHHHHHcCCCHH
Confidence 1 4578888999998765
No 150
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.59 E-value=3.4 Score=34.12 Aligned_cols=52 Identities=10% Similarity=-0.075 Sum_probs=38.1
Q ss_pred cCCcHHHHHHHHHcChHHHHhchhhccccCCCCcccccccCCcchHHHHHHHH
Q 007619 200 VEDVIPILVAAFHCQLNQLRSHCVQRVVRSNLDDVCLEKELPDEVSGEIKSLR 252 (595)
Q Consensus 200 ~~n~~t~L~~A~~~~~~~Ll~~~~~~i~~~~~~~t~L~~al~~~~l~~ii~lL 252 (595)
.+||..++.+|..+++..|.+.|.+++.+++.........+.... ..+..+|
T Consensus 10 ~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~-~~L~~lL 61 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPH-RLLTDII 61 (105)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCH-HHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCH-HHHHHHH
Confidence 789999999999999999999999999988766544332222222 4455555
No 151
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=39.29 E-value=19 Score=38.65 Aligned_cols=87 Identities=16% Similarity=0.229 Sum_probs=54.2
Q ss_pred CeEEEEcCeEEeeehhhhhhcCHH-HHHHHhcCCCCCCCCcCCCCCeeeecccccCCcCCHHHHHHHhhHhcc-CCCCCC
Q 007619 67 DADIVVEGKSVAVHRCILSARSQF-FHELFKKGNDNDGSAVSEGKPKYLMTELVPYGKVGYEAFNVILYYFYT-GKLKPS 144 (595)
Q Consensus 67 Dv~i~v~g~~~~aHr~ILaarS~~-F~~mf~~~~~e~~~~~~~~~~~i~l~~l~~~~~v~~~~f~~lL~ylYt-g~l~~~ 144 (595)
=|+|.|+|+.|...+..|..--+- +..++..... -.....++-++ = ....|..+|.|+.+ |++..+
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~-----~~~~~~~~f~D-R------~~~~F~~IL~~~r~~g~l~~p 120 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRY-----FDPLRNEYFFD-R------NRPSFDAILYYYQSGGRLRRP 120 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGG-----EETTTTEEEEC-S------CHHHHHHHHHHHHHTSCCCCC
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcc-----cCCCCCCEEEc-C------ChHHHHHHHHHHhcCCccccC
Confidence 366889999999999999643211 1112221100 00123455553 2 44599999999999 998755
Q ss_pred CCcccccccCCCCCcCCCchHHHHHHHHHHHHHcChHHHH
Q 007619 145 PSEVSTCVDDACAHDACPPAINYAIELMYASAAFQMKELV 184 (595)
Q Consensus 145 ~~~~~~c~d~~c~h~~c~p~i~~v~elL~~A~~~~l~~L~ 184 (595)
+ +++ ...++.-|..|++.+..
T Consensus 121 ~-~~~------------------~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 121 V-NVP------------------LDIFSEEIRFYELGEEA 141 (514)
T ss_dssp T-TSC------------------HHHHHHHHHHTTCCHHH
T ss_pred C-ccc------------------HHHHHHHHHhcCCCHHH
Confidence 3 321 34678889999997654
No 152
>4a1q_A ORF E73; viral protein, extremophIle, archaea, ribbon-helix-helix Pro DNA-binding proteins; NMR {Sulfolobus virus ragged hills} PDB: 4aai_A
Probab=29.91 E-value=9 Score=27.56 Aligned_cols=10 Identities=40% Similarity=0.893 Sum_probs=7.8
Q ss_pred HhhCCccCCC
Q 007619 508 VETGRRYFPH 517 (595)
Q Consensus 508 ~~~~~~~f~~ 517 (595)
-|.|+||||-
T Consensus 63 ~ei~krffpa 72 (73)
T 4a1q_A 63 DEISKRFFPA 72 (73)
T ss_dssp HHHHHHHSCC
T ss_pred HHHHHhccCC
Confidence 3788899984
No 153
>3gna_A RAG-1, V(D)J recombination-activating protein 1; DNA recombination, DNA-binding, endonucle hydrolase; 2.40A {Mus musculus} PDB: 3gnb_A
Probab=23.70 E-value=64 Score=24.74 Aligned_cols=25 Identities=36% Similarity=0.478 Sum_probs=19.0
Q ss_pred HHHHHHhhHHHHHHHHHHhhhhHhhhh
Q 007619 544 QRLKRARFMELKEDVQKAFYKDMAEKN 570 (595)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (595)
++..|-|..|||-.| |+|.+ |||..
T Consensus 33 rraqkhrlrelk~qv-k~Fad-kEegG 57 (96)
T 3gna_A 33 RRAQKHRLRELKIQV-KEFAD-KEEGG 57 (96)
T ss_dssp HHHHHHHHHHHHHHH-HHHHH-HHSTT
T ss_pred HHHHHHHHHHHHHHH-HHHHh-HhhCC
Confidence 556688999999877 78986 66653
Done!