Query 007620
Match_columns 595
No_of_seqs 222 out of 2267
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 06:20:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007620.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007620hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 5.9E-30 2E-34 287.3 41.7 428 6-566 37-544 (740)
2 2ecf_A Dipeptidyl peptidase IV 100.0 1E-28 3.5E-33 277.6 42.1 419 5-568 64-564 (741)
3 2z3z_A Dipeptidyl aminopeptida 100.0 3.2E-27 1.1E-31 263.9 42.4 418 6-568 45-531 (706)
4 3azo_A Aminopeptidase; POP fam 100.0 1.3E-26 4.4E-31 257.1 45.2 396 32-560 25-458 (662)
5 1z68_A Fibroblast activation p 100.0 1.2E-27 4.2E-32 267.9 37.1 429 5-567 36-539 (719)
6 1xfd_A DIP, dipeptidyl aminope 100.0 8.4E-28 2.9E-32 269.3 35.0 431 6-566 38-538 (723)
7 3o4h_A Acylamino-acid-releasin 100.0 7E-27 2.4E-31 255.2 34.4 359 33-566 24-399 (582)
8 2bkl_A Prolyl endopeptidase; m 99.9 8.7E-25 3E-29 243.5 41.1 397 36-564 73-483 (695)
9 2xdw_A Prolyl endopeptidase; a 99.9 8.7E-25 3E-29 244.2 40.2 400 32-560 75-501 (710)
10 3iuj_A Prolyl endopeptidase; h 99.9 1.3E-23 4.4E-28 233.7 39.0 349 32-560 130-488 (693)
11 1yr2_A Prolyl oligopeptidase; 99.9 3.7E-23 1.3E-27 232.0 38.1 396 37-560 113-522 (741)
12 2xe4_A Oligopeptidase B; hydro 99.9 1.6E-22 5.3E-27 226.4 39.8 342 32-560 175-543 (751)
13 3pe7_A Oligogalacturonate lyas 99.9 1.6E-20 5.6E-25 193.5 30.0 351 6-462 12-385 (388)
14 1k32_A Tricorn protease; prote 99.8 7E-18 2.4E-22 196.4 34.2 368 5-470 33-470 (1045)
15 2ecf_A Dipeptidyl peptidase IV 99.8 3.2E-17 1.1E-21 183.8 38.3 324 32-469 38-423 (741)
16 2hqs_A Protein TOLB; TOLB, PAL 99.8 5.8E-18 2E-22 176.3 29.6 246 5-363 159-408 (415)
17 3c5m_A Oligogalacturonate lyas 99.8 7.4E-18 2.5E-22 173.7 27.1 339 18-466 20-389 (396)
18 4a5s_A Dipeptidyl peptidase 4 99.8 2.4E-17 8.2E-22 184.8 32.2 332 33-469 19-409 (740)
19 2ojh_A Uncharacterized protein 99.8 4.2E-16 1.4E-20 153.0 31.4 262 4-373 21-292 (297)
20 3pe7_A Oligogalacturonate lyas 99.8 2.7E-16 9.1E-21 161.8 30.6 309 61-472 10-340 (388)
21 2gop_A Trilobed protease; beta 99.8 4.6E-16 1.6E-20 157.4 28.5 310 27-475 11-344 (347)
22 2hqs_A Protein TOLB; TOLB, PAL 99.7 5.5E-16 1.9E-20 161.3 29.2 230 41-373 142-374 (415)
23 2z3z_A Dipeptidyl aminopeptida 99.7 1.4E-15 4.7E-20 169.6 33.1 295 5-373 101-421 (706)
24 1xfd_A DIP, dipeptidyl aminope 99.7 5.2E-16 1.8E-20 173.5 28.5 308 3-373 89-430 (723)
25 1z68_A Fibroblast activation p 99.7 7.3E-16 2.5E-20 172.2 26.3 329 33-469 18-403 (719)
26 3c5m_A Oligogalacturonate lyas 99.7 3.4E-15 1.2E-19 153.7 26.1 291 5-372 60-370 (396)
27 1k32_A Tricorn protease; prote 99.7 2.7E-14 9.1E-19 166.2 34.5 248 5-372 226-491 (1045)
28 3azo_A Aminopeptidase; POP fam 99.7 6.5E-15 2.2E-19 162.9 27.9 293 5-413 49-378 (662)
29 4hvt_A Ritya.17583.B, post-pro 99.7 1.7E-13 6E-18 150.1 35.0 122 434-578 403-526 (711)
30 2gop_A Trilobed protease; beta 99.6 1E-13 3.5E-18 140.1 28.9 253 3-342 41-298 (347)
31 2xdw_A Prolyl endopeptidase; a 99.6 2.2E-13 7.6E-18 151.8 31.8 276 5-373 98-400 (710)
32 2bkl_A Prolyl endopeptidase; m 99.6 4.6E-13 1.6E-17 148.9 30.5 294 5-411 94-404 (695)
33 1l0q_A Surface layer protein; 99.6 2E-11 7E-16 125.2 38.1 247 5-371 12-262 (391)
34 2ojh_A Uncharacterized protein 99.6 8.7E-13 3E-17 129.1 26.5 223 5-317 62-290 (297)
35 3vgz_A Uncharacterized protein 99.5 2.1E-11 7.3E-16 122.9 34.6 276 32-447 42-334 (353)
36 3o4h_A Acylamino-acid-releasin 99.5 2.4E-13 8.2E-18 147.9 20.9 243 6-371 47-300 (582)
37 1yr2_A Prolyl oligopeptidase; 99.5 5.9E-12 2E-16 140.9 28.0 274 5-373 133-427 (741)
38 3hfq_A Uncharacterized protein 99.5 5.7E-12 1.9E-16 127.3 24.7 88 6-105 17-104 (347)
39 3s25_A Hypothetical 7-bladed b 99.4 4.1E-11 1.4E-15 117.9 26.7 284 33-468 16-300 (302)
40 3u4y_A Uncharacterized protein 99.4 2.6E-10 8.8E-15 114.0 31.6 257 5-372 20-292 (331)
41 3s25_A Hypothetical 7-bladed b 99.4 1E-10 3.5E-15 115.1 27.0 239 6-372 38-281 (302)
42 3scy_A Hypothetical bacterial 99.4 1.9E-10 6.6E-15 116.7 30.0 89 5-104 27-115 (361)
43 1l0q_A Surface layer protein; 99.4 8.4E-10 2.9E-14 113.0 33.2 266 61-466 11-280 (391)
44 1ri6_A Putative isomerase YBHE 99.4 4.1E-10 1.4E-14 112.8 29.7 263 6-371 16-295 (343)
45 3vgz_A Uncharacterized protein 99.4 6.1E-10 2.1E-14 112.1 31.0 254 6-372 70-333 (353)
46 3u4y_A Uncharacterized protein 99.4 4.6E-10 1.6E-14 112.2 29.6 292 35-463 2-306 (331)
47 1pby_B Quinohemoprotein amine 99.3 1.1E-09 3.8E-14 109.2 30.5 267 5-370 11-297 (337)
48 3bws_A Protein LP49; two-domai 99.3 3.5E-09 1.2E-13 110.0 33.7 322 6-459 102-430 (433)
49 3hfq_A Uncharacterized protein 99.3 2.6E-09 8.8E-14 107.6 28.4 300 60-470 16-328 (347)
50 1gxr_A ESG1, transducin-like e 99.3 9E-09 3.1E-13 102.5 31.0 248 6-371 73-325 (337)
51 1gxr_A ESG1, transducin-like e 99.2 3E-08 1E-12 98.7 33.4 227 28-371 49-284 (337)
52 2ymu_A WD-40 repeat protein; u 99.2 1.1E-08 3.9E-13 110.4 31.9 219 32-371 305-527 (577)
53 3zwl_B Eukaryotic translation 99.2 2.2E-08 7.4E-13 101.0 32.1 303 31-461 33-346 (369)
54 2ymu_A WD-40 repeat protein; u 99.2 3.1E-08 1.1E-12 106.9 35.0 219 32-371 264-486 (577)
55 3bws_A Protein LP49; two-domai 99.2 1.1E-08 3.8E-13 106.2 29.3 256 6-371 145-419 (433)
56 1pby_B Quinohemoprotein amine 99.2 1.6E-08 5.6E-13 100.6 29.4 276 61-466 10-315 (337)
57 4g56_B MGC81050 protein; prote 99.1 1.9E-08 6.4E-13 102.0 26.7 231 32-371 44-288 (357)
58 3iuj_A Prolyl endopeptidase; h 99.1 5.7E-09 1.9E-13 115.7 24.0 245 5-342 155-412 (693)
59 2xe4_A Oligopeptidase B; hydro 99.1 6.7E-09 2.3E-13 116.0 24.7 270 32-468 118-415 (751)
60 3ow8_A WD repeat-containing pr 99.1 5.6E-08 1.9E-12 96.9 28.4 221 32-371 82-309 (321)
61 1nir_A Nitrite reductase; hemo 99.1 2.4E-07 8.2E-12 99.3 35.0 324 6-466 160-519 (543)
62 1jmx_B Amine dehydrogenase; ox 99.1 2.2E-08 7.4E-13 100.4 24.8 152 5-222 21-179 (349)
63 3scy_A Hypothetical bacterial 99.1 1.6E-07 5.6E-12 94.9 31.5 312 43-468 13-346 (361)
64 4aez_A CDC20, WD repeat-contai 99.1 1E-07 3.6E-12 98.0 30.0 248 6-371 114-368 (401)
65 3zwl_B Eukaryotic translation 99.0 9.2E-08 3.1E-12 96.3 27.5 248 6-371 55-334 (369)
66 1r5m_A SIR4-interacting protei 99.0 3.5E-07 1.2E-11 94.0 32.1 292 31-462 46-362 (425)
67 1ri6_A Putative isomerase YBHE 99.0 5.5E-08 1.9E-12 97.0 24.7 231 6-333 61-310 (343)
68 2vdu_B TRNA (guanine-N(7)-)-me 99.0 3E-07 1E-11 96.1 31.3 116 175-334 150-272 (450)
69 3ei3_B DNA damage-binding prot 99.0 5.8E-07 2E-11 91.5 32.6 296 32-460 75-381 (383)
70 4h5i_A Guanine nucleotide-exch 99.0 1.5E-08 5.2E-13 103.0 20.2 199 33-329 136-341 (365)
71 1nr0_A Actin interacting prote 99.0 9.3E-07 3.2E-11 96.3 35.0 218 6-333 40-270 (611)
72 1r5m_A SIR4-interacting protei 99.0 3.5E-07 1.2E-11 94.0 29.6 228 32-371 110-349 (425)
73 1jof_A Carboxy-CIS,CIS-muconat 99.0 1.3E-07 4.3E-12 96.1 25.1 185 6-260 15-210 (365)
74 1nir_A Nitrite reductase; hemo 99.0 4.5E-07 1.5E-11 97.1 30.5 262 6-372 201-498 (543)
75 3mkq_A Coatomer beta'-subunit; 99.0 3.6E-07 1.2E-11 103.0 31.1 228 21-371 6-247 (814)
76 1jmx_B Amine dehydrogenase; ox 99.0 2.8E-07 9.4E-12 92.2 26.8 124 35-220 4-136 (349)
77 3ow8_A WD repeat-containing pr 99.0 1.5E-07 5E-12 93.8 24.1 209 6-327 103-317 (321)
78 3vl1_A 26S proteasome regulato 98.9 6.5E-07 2.2E-11 92.2 29.2 218 34-371 60-310 (420)
79 4ery_A WD repeat-containing pr 98.9 4.9E-06 1.7E-10 81.9 34.3 193 32-333 25-223 (312)
80 3vl1_A 26S proteasome regulato 98.9 1.1E-06 3.8E-11 90.5 30.5 226 6-334 79-323 (420)
81 3dw8_B Serine/threonine-protei 98.9 9.4E-07 3.2E-11 91.8 29.9 119 176-333 179-315 (447)
82 3sfz_A APAF-1, apoptotic pepti 98.9 3.3E-07 1.1E-11 108.5 29.4 355 6-464 820-1210(1249)
83 4h5i_A Guanine nucleotide-exch 98.9 2.7E-06 9.4E-11 86.2 32.3 199 176-460 135-342 (365)
84 2pm9_A Protein WEB1, protein t 98.9 1.1E-07 3.7E-12 97.9 21.9 239 32-371 14-282 (416)
85 1nr0_A Actin interacting prote 98.9 2E-07 6.7E-12 101.7 24.9 231 32-371 20-258 (611)
86 4gqb_B Methylosome protein 50; 98.9 2E-07 6.8E-12 93.8 22.5 228 32-371 84-318 (344)
87 1pgu_A Actin interacting prote 98.9 9.1E-07 3.1E-11 95.9 29.5 224 32-371 20-271 (615)
88 2pm9_A Protein WEB1, protein t 98.9 4.9E-07 1.7E-11 92.9 24.8 256 6-370 46-324 (416)
89 3fm0_A Protein CIAO1; WDR39,SG 98.8 2.4E-06 8.1E-11 85.8 28.9 198 32-331 18-225 (345)
90 2xzm_R RACK1; ribosome, transl 98.8 7.7E-06 2.6E-10 81.9 32.5 224 32-370 23-273 (343)
91 4gqb_B Methylosome protein 50; 98.8 3.7E-07 1.3E-11 91.8 22.5 217 6-329 104-329 (344)
92 1got_B GT-beta; complex (GTP-b 98.8 6.8E-06 2.3E-10 82.2 31.6 223 32-371 57-289 (340)
93 4g56_B MGC81050 protein; prote 98.8 1.9E-07 6.5E-12 94.5 20.0 228 32-371 96-331 (357)
94 1yfq_A Cell cycle arrest prote 98.8 2E-06 7E-11 85.6 27.4 190 32-332 13-226 (342)
95 2j04_A TAU60, YPL007P, hypothe 98.8 3.6E-07 1.2E-11 96.0 21.8 140 177-371 132-286 (588)
96 1got_B GT-beta; complex (GTP-b 98.8 4.3E-06 1.5E-10 83.7 29.1 239 6-371 78-331 (340)
97 3frx_A Guanine nucleotide-bind 98.8 4.1E-06 1.4E-10 83.0 28.2 225 32-371 19-256 (319)
98 2ynn_A Coatomer subunit beta'; 98.8 7.3E-06 2.5E-10 80.6 29.7 230 22-371 7-247 (304)
99 2pbi_B Guanine nucleotide-bind 98.8 1.5E-05 5E-10 80.3 32.3 227 32-371 66-303 (354)
100 1vyh_C Platelet-activating fac 98.8 4.5E-06 1.5E-10 86.0 28.6 243 6-371 131-399 (410)
101 3iz6_a 40S ribosomal protein R 98.8 7.7E-06 2.6E-10 83.3 30.0 240 32-371 68-317 (380)
102 4e54_B DNA damage-binding prot 98.8 2E-06 6.7E-11 89.5 25.9 304 32-465 121-434 (435)
103 3mkq_A Coatomer beta'-subunit; 98.8 3.3E-06 1.1E-10 95.1 29.7 236 6-367 36-285 (814)
104 1k8k_C P40, ARP2/3 complex 41 98.8 9.6E-07 3.3E-11 89.1 22.9 222 32-370 10-262 (372)
105 1sq9_A Antiviral protein SKI8; 98.8 9.2E-07 3.1E-11 90.3 22.8 121 176-334 188-323 (397)
106 2xzm_R RACK1; ribosome, transl 98.8 1E-05 3.5E-10 81.0 29.9 230 32-371 78-328 (343)
107 3ei3_B DNA damage-binding prot 98.7 1.6E-06 5.4E-11 88.2 24.0 254 6-370 97-370 (383)
108 3dwl_C Actin-related protein 2 98.7 1.4E-07 4.6E-12 95.9 15.9 224 32-370 13-269 (377)
109 1vyh_C Platelet-activating fac 98.7 9.2E-06 3.2E-10 83.6 29.9 220 32-371 110-357 (410)
110 1sq9_A Antiviral protein SKI8; 98.7 1.2E-05 4.2E-10 81.8 30.4 229 32-371 18-310 (397)
111 3i2n_A WD repeat-containing pr 98.7 4.6E-06 1.6E-10 83.4 26.4 202 32-333 20-243 (357)
112 3fm0_A Protein CIAO1; WDR39,SG 98.7 6.8E-06 2.3E-10 82.5 27.0 61 32-104 63-123 (345)
113 4aez_A CDC20, WD repeat-contai 98.7 3.6E-05 1.2E-09 78.8 32.8 201 62-371 113-322 (401)
114 3sfz_A APAF-1, apoptotic pepti 98.7 9.6E-06 3.3E-10 96.0 32.2 214 6-317 680-901 (1249)
115 2mad_H Methylamine dehydrogena 98.7 3.2E-05 1.1E-09 78.4 31.7 92 6-104 48-142 (373)
116 3e5z_A Putative gluconolactona 98.7 1.5E-05 5E-10 77.9 28.3 241 18-371 17-275 (296)
117 1erj_A Transcriptional repress 98.7 6.7E-06 2.3E-10 84.1 26.8 200 33-334 126-342 (393)
118 3dm0_A Maltose-binding peripla 98.7 1.6E-05 5.6E-10 87.8 31.9 228 32-371 384-621 (694)
119 3sjl_D Methylamine dehydrogena 98.7 2E-05 6.8E-10 79.4 29.3 305 36-465 38-367 (386)
120 2aq5_A Coronin-1A; WD40 repeat 98.7 2.8E-06 9.7E-11 87.1 23.8 249 6-368 58-329 (402)
121 3dw8_B Serine/threonine-protei 98.7 6.8E-06 2.3E-10 85.2 26.5 125 176-334 228-374 (447)
122 3g4e_A Regucalcin; six bladed 98.7 6.3E-06 2.2E-10 80.8 24.5 230 33-372 15-261 (297)
123 1qks_A Cytochrome CD1 nitrite 98.7 6.1E-05 2.1E-09 80.6 33.9 322 6-465 178-542 (567)
124 2ghs_A AGR_C_1268P; regucalcin 98.6 8.5E-06 2.9E-10 81.1 25.3 224 33-372 51-291 (326)
125 4a11_B DNA excision repair pro 98.6 3.4E-05 1.2E-09 78.5 30.4 212 19-334 33-277 (408)
126 4ery_A WD repeat-containing pr 98.6 1.6E-05 5.6E-10 78.1 27.0 216 6-330 88-311 (312)
127 4gga_A P55CDC, cell division c 98.6 1.5E-05 5.2E-10 82.2 27.9 249 6-371 126-383 (420)
128 3i2n_A WD repeat-containing pr 98.6 3.3E-06 1.1E-10 84.5 21.9 214 5-330 44-290 (357)
129 3frx_A Guanine nucleotide-bind 98.6 2E-05 6.8E-10 78.0 27.2 227 32-371 67-305 (319)
130 1qks_A Cytochrome CD1 nitrite 98.6 4.4E-05 1.5E-09 81.7 31.6 272 6-372 219-522 (567)
131 3dm0_A Maltose-binding peripla 98.6 1.4E-05 4.9E-10 88.3 28.9 217 6-334 406-633 (694)
132 4e54_B DNA damage-binding prot 98.6 1.1E-05 3.6E-10 83.8 26.0 256 6-369 143-417 (435)
133 2vdu_B TRNA (guanine-N(7)-)-me 98.6 1.6E-05 5.5E-10 82.8 27.4 62 32-104 104-167 (450)
134 2aq5_A Coronin-1A; WD40 repeat 98.6 1.1E-05 3.8E-10 82.6 25.7 149 175-371 132-286 (402)
135 2pbi_B Guanine nucleotide-bind 98.6 2.7E-05 9.1E-10 78.4 27.9 239 7-371 88-345 (354)
136 1jof_A Carboxy-CIS,CIS-muconat 98.6 4.9E-06 1.7E-10 84.2 22.3 95 6-104 61-162 (365)
137 4aow_A Guanine nucleotide-bind 98.6 0.0001 3.6E-09 72.9 31.3 115 177-333 131-246 (340)
138 3dr2_A Exported gluconolactona 98.6 1E-05 3.6E-10 79.5 22.6 246 18-371 34-295 (305)
139 3dwl_C Actin-related protein 2 98.5 1.1E-06 3.8E-11 89.1 15.9 203 6-316 34-269 (377)
140 2oiz_A Aromatic amine dehydrog 98.5 9.6E-05 3.3E-09 74.6 29.9 92 6-104 32-125 (361)
141 2oiz_A Aromatic amine dehydrog 98.5 0.00016 5.6E-09 72.8 31.4 121 40-221 13-143 (361)
142 2dg1_A DRP35, lactonase; beta 98.5 3.9E-05 1.3E-09 76.1 26.2 241 32-373 46-300 (333)
143 1k8k_C P40, ARP2/3 complex 41 98.5 1.2E-05 4E-10 81.0 22.6 214 5-330 30-273 (372)
144 3jrp_A Fusion protein of prote 98.5 3.3E-05 1.1E-09 77.7 25.0 228 32-372 13-276 (379)
145 3c75_H MADH, methylamine dehyd 98.5 0.00017 5.9E-09 73.8 29.8 301 39-465 81-406 (426)
146 1erj_A Transcriptional repress 98.5 2.1E-05 7.3E-10 80.3 23.3 78 6-104 146-225 (393)
147 3c75_H MADH, methylamine dehyd 98.5 6.2E-05 2.1E-09 77.2 26.3 90 5-104 99-194 (426)
148 1yfq_A Cell cycle arrest prote 98.5 3.2E-05 1.1E-09 76.8 23.9 77 6-104 34-118 (342)
149 3g4e_A Regucalcin; six bladed 98.5 0.00013 4.5E-09 71.2 27.8 144 157-332 35-179 (297)
150 2j04_A TAU60, YPL007P, hypothe 98.5 9.2E-06 3.2E-10 85.4 20.1 190 30-330 85-296 (588)
151 2ynn_A Coatomer subunit beta'; 98.4 4.9E-05 1.7E-09 74.6 24.3 214 6-334 36-260 (304)
152 2mad_H Methylamine dehydrogena 98.4 0.00012 4.1E-09 74.1 27.7 134 179-334 217-351 (373)
153 3k26_A Polycomb protein EED; W 98.4 2.8E-05 9.5E-10 77.8 23.0 135 6-220 45-194 (366)
154 3e5z_A Putative gluconolactona 98.4 0.0001 3.4E-09 71.9 25.9 231 6-334 51-287 (296)
155 2xyi_A Probable histone-bindin 98.4 4.8E-05 1.6E-09 78.7 24.4 115 176-333 233-353 (430)
156 2oaj_A Protein SNI1; WD40 repe 98.4 3.1E-05 1.1E-09 88.1 23.4 203 32-333 19-242 (902)
157 3k26_A Polycomb protein EED; W 98.4 0.00016 5.6E-09 72.1 26.4 143 32-255 20-175 (366)
158 3iz6_a 40S ribosomal protein R 98.4 0.00015 5E-09 73.7 25.9 144 176-371 207-363 (380)
159 4gga_A P55CDC, cell division c 98.3 0.00084 2.9E-08 69.0 31.5 58 33-104 108-165 (420)
160 3sjl_D Methylamine dehydrogena 98.3 0.00075 2.6E-08 67.9 29.9 90 5-104 59-154 (386)
161 1pgu_A Actin interacting prote 98.3 0.00019 6.6E-09 77.4 27.5 222 6-333 40-283 (615)
162 4aow_A Guanine nucleotide-bind 98.3 0.00045 1.5E-08 68.2 28.1 230 32-371 88-325 (340)
163 4ggc_A P55CDC, cell division c 98.3 0.00034 1.2E-08 68.3 26.3 249 6-371 46-303 (318)
164 2pm7_B Protein transport prote 98.3 0.00015 5.2E-09 70.7 23.4 58 32-104 11-73 (297)
165 3f3f_A Nucleoporin SEH1; struc 98.3 0.00023 7.8E-09 70.2 25.0 58 32-104 13-77 (351)
166 3odt_A Protein DOA1; ubiquitin 98.3 0.001 3.6E-08 64.5 29.4 58 32-104 20-77 (313)
167 2dg1_A DRP35, lactonase; beta 98.3 0.00028 9.6E-09 69.8 25.4 233 6-333 67-316 (333)
168 2ghs_A AGR_C_1268P; regucalcin 98.2 0.0001 3.4E-09 73.2 21.0 137 6-217 72-209 (326)
169 3odt_A Protein DOA1; ubiquitin 98.2 0.00059 2E-08 66.3 25.9 231 6-367 40-281 (313)
170 3bg1_A Protein SEC13 homolog; 98.2 0.00013 4.4E-09 72.0 21.0 58 32-104 15-77 (316)
171 3dr2_A Exported gluconolactona 98.2 0.00072 2.4E-08 66.2 26.2 183 70-333 33-224 (305)
172 4a11_B DNA excision repair pro 98.2 0.0004 1.4E-08 70.4 24.2 78 6-104 123-204 (408)
173 3jrp_A Fusion protein of prote 98.2 0.00024 8.2E-09 71.3 22.3 221 6-331 34-287 (379)
174 3mmy_A MRNA export factor; mRN 98.1 0.00076 2.6E-08 67.2 25.6 79 6-104 65-147 (368)
175 4ao6_A Esterase; hydrolase, th 98.1 1.2E-06 4E-11 84.3 3.9 92 453-569 4-98 (259)
176 2xyi_A Probable histone-bindin 98.1 0.00042 1.4E-08 71.6 23.6 114 175-329 278-408 (430)
177 3dsm_A Uncharacterized protein 98.1 0.0038 1.3E-07 61.7 29.7 230 157-463 64-303 (328)
178 2hes_X YDR267CP; beta-propelle 98.1 0.00058 2E-08 67.7 22.8 80 6-104 35-125 (330)
179 2pm7_B Protein transport prote 98.1 0.0012 4.1E-08 64.2 24.4 84 6-104 32-119 (297)
180 3mmy_A MRNA export factor; mRN 98.0 0.0016 5.4E-08 64.8 25.4 113 31-220 40-162 (368)
181 4ggc_A P55CDC, cell division c 98.0 0.011 3.9E-07 57.2 30.9 58 33-104 28-85 (318)
182 3v7d_B Cell division control p 98.0 0.0052 1.8E-07 63.7 29.9 79 6-105 143-224 (464)
183 3jro_A Fusion protein of prote 98.0 0.00036 1.2E-08 77.8 21.8 61 32-104 11-73 (753)
184 3f3f_A Nucleoporin SEH1; struc 98.0 0.00098 3.3E-08 65.5 22.6 81 6-104 34-130 (351)
185 3hrp_A Uncharacterized protein 97.9 0.0035 1.2E-07 64.2 26.4 200 32-333 132-354 (409)
186 3lrv_A PRE-mRNA-splicing facto 97.9 0.0021 7.2E-08 63.9 24.1 133 7-220 106-246 (343)
187 3dsm_A Uncharacterized protein 97.9 0.0026 8.8E-08 62.9 24.3 192 40-334 51-254 (328)
188 3vu4_A KMHSV2; beta-propeller 97.9 0.0026 8.9E-08 63.6 24.5 71 244-333 198-271 (355)
189 3lrv_A PRE-mRNA-splicing facto 97.9 0.0008 2.7E-08 67.0 20.5 166 158-371 105-279 (343)
190 1mda_H Methylamine dehydrogena 97.9 0.00061 2.1E-08 68.5 19.2 92 6-104 47-141 (368)
191 1npe_A Nidogen, entactin; glyc 97.9 0.0042 1.4E-07 59.3 24.2 184 62-333 10-198 (267)
192 1rwi_B Serine/threonine-protei 97.8 0.015 5.2E-07 55.0 26.9 194 32-333 25-222 (270)
193 4gq1_A NUP37; propeller, trans 97.8 0.0016 5.5E-08 66.2 21.0 34 175-220 187-220 (393)
194 1npe_A Nidogen, entactin; glyc 97.8 0.0042 1.4E-07 59.2 22.7 145 32-260 37-184 (267)
195 3gre_A Serine/threonine-protei 97.8 0.0017 5.9E-08 66.8 21.3 60 31-105 64-130 (437)
196 3vu4_A KMHSV2; beta-propeller 97.8 0.002 6.7E-08 64.6 20.9 68 293-371 190-259 (355)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.0056 1.9E-07 59.5 23.5 66 32-100 19-85 (314)
198 3hrp_A Uncharacterized protein 97.7 0.0051 1.8E-07 62.9 23.4 82 7-104 154-236 (409)
199 3v65_B Low-density lipoprotein 97.7 0.013 4.5E-07 59.3 26.3 184 6-294 97-283 (386)
200 3jro_A Fusion protein of prote 97.7 0.0012 4.1E-08 73.5 20.1 83 6-104 32-119 (753)
201 1mda_H Methylamine dehydrogena 97.7 0.0036 1.2E-07 62.8 21.4 36 63-104 47-82 (368)
202 3bg1_A Protein SEC13 homolog; 97.7 0.0018 6E-08 63.7 18.3 81 6-104 36-123 (316)
203 3v7d_B Cell division control p 97.7 0.044 1.5E-06 56.5 29.7 51 276-333 290-341 (464)
204 2ece_A 462AA long hypothetical 97.7 0.017 5.8E-07 58.7 25.1 68 300-371 322-399 (462)
205 1fwx_A Nitrous oxide reductase 97.7 0.0016 5.6E-08 68.5 18.2 180 6-219 113-309 (595)
206 2hes_X YDR267CP; beta-propelle 97.7 0.0048 1.6E-07 60.9 21.2 111 176-330 109-229 (330)
207 3v64_C Agrin; beta propeller, 97.6 0.031 1.1E-06 55.6 26.8 144 32-260 74-220 (349)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 97.6 0.01 3.6E-07 57.6 22.9 238 6-333 47-299 (314)
209 1ijq_A LDL receptor, low-densi 97.6 0.05 1.7E-06 53.2 27.6 185 6-295 11-202 (316)
210 3v65_B Low-density lipoprotein 97.6 0.076 2.6E-06 53.6 29.4 168 155-371 94-264 (386)
211 3v64_C Agrin; beta propeller, 97.5 0.048 1.6E-06 54.3 26.7 185 62-342 53-241 (349)
212 1fwx_A Nitrous oxide reductase 97.5 0.0056 1.9E-07 64.5 19.8 121 33-196 87-216 (595)
213 3gre_A Serine/threonine-protei 97.5 0.0087 3E-07 61.4 21.4 52 157-221 192-248 (437)
214 1rwi_B Serine/threonine-protei 97.5 0.043 1.5E-06 51.7 24.8 193 32-333 68-264 (270)
215 2j04_B YDR362CP, TAU91; beta p 97.5 0.0034 1.2E-07 66.4 18.1 140 176-371 268-416 (524)
216 2j04_B YDR362CP, TAU91; beta p 97.5 0.0093 3.2E-07 63.1 21.1 115 176-333 310-428 (524)
217 3p5b_L Low density lipoprotein 97.4 0.099 3.4E-06 53.0 27.9 185 62-342 92-284 (400)
218 3fvz_A Peptidyl-glycine alpha- 97.4 0.03 1E-06 55.1 23.1 120 177-333 198-322 (329)
219 2oaj_A Protein SNI1; WD40 repe 97.4 0.0097 3.3E-07 67.6 21.8 110 175-333 59-182 (902)
220 2iwa_A Glutamine cyclotransfer 97.4 0.018 6E-07 54.7 20.2 198 33-333 23-237 (266)
221 1q7f_A NHL, brain tumor CG1071 97.4 0.062 2.1E-06 51.3 24.5 132 158-333 101-238 (286)
222 2ece_A 462AA long hypothetical 97.3 0.17 5.9E-06 51.4 34.1 59 178-254 141-200 (462)
223 3p5b_L Low density lipoprotein 97.3 0.1 3.5E-06 52.9 26.4 185 6-295 93-284 (400)
224 4gq1_A NUP37; propeller, trans 97.3 0.011 3.7E-07 60.0 19.1 58 32-104 138-204 (393)
225 1vlq_A Acetyl xylan esterase; 97.3 2.5E-05 8.4E-10 77.9 -1.1 67 481-568 67-133 (337)
226 3no2_A Uncharacterized protein 97.3 0.071 2.4E-06 51.0 23.5 81 4-104 14-94 (276)
227 4a0p_A LRP6, LRP-6, low-densit 97.2 0.21 7E-06 53.9 27.9 181 62-334 15-198 (628)
228 3fvz_A Peptidyl-glycine alpha- 97.2 0.12 3.9E-06 50.8 24.2 159 177-371 145-309 (329)
229 1n7d_A LDL receptor, low-densi 97.2 0.013 4.3E-07 64.4 18.5 185 62-342 386-578 (699)
230 3nuz_A Putative acetyl xylan e 97.1 0.0004 1.4E-08 71.0 6.0 82 480-570 90-178 (398)
231 3m0c_C LDL receptor, low-densi 97.1 0.19 6.5E-06 55.7 27.7 201 32-334 425-633 (791)
232 3m0c_C LDL receptor, low-densi 97.1 0.12 4E-06 57.3 26.0 185 62-342 404-596 (791)
233 2p4o_A Hypothetical protein; p 97.1 0.24 8.1E-06 48.0 25.8 68 20-104 21-88 (306)
234 3g8y_A SUSD/RAGB-associated es 97.0 0.00073 2.5E-08 68.8 6.7 81 480-569 85-172 (391)
235 1n7d_A LDL receptor, low-densi 97.0 0.011 3.6E-07 65.0 16.2 101 157-295 475-578 (699)
236 3sov_A LRP-6, low-density lipo 97.0 0.19 6.7E-06 49.0 23.5 198 32-334 36-239 (318)
237 2qe8_A Uncharacterized protein 96.9 0.35 1.2E-05 47.6 25.3 143 19-224 7-160 (343)
238 2w18_A PALB2, fancn, partner a 96.9 0.13 4.3E-06 50.6 21.1 65 156-221 202-272 (356)
239 2oit_A Nucleoporin 214KDA; NH2 96.9 0.0042 1.5E-07 64.1 11.1 123 32-224 94-229 (434)
240 1ijq_A LDL receptor, low-densi 96.9 0.36 1.2E-05 47.0 28.6 168 156-372 9-183 (316)
241 2oit_A Nucleoporin 214KDA; NH2 96.9 0.027 9.2E-07 58.0 17.0 116 176-333 151-278 (434)
242 2ovr_B FBW7, F-BOX/WD repeat p 96.8 0.19 6.4E-06 51.5 23.0 55 276-333 382-442 (445)
243 3sov_A LRP-6, low-density lipo 96.7 0.47 1.6E-05 46.2 26.5 168 155-372 11-185 (318)
244 1gkl_A Endo-1,4-beta-xylanase 96.7 0.0038 1.3E-07 60.8 8.9 38 481-521 40-77 (297)
245 2hdw_A Hypothetical protein PA 96.7 0.0014 4.7E-08 65.7 5.8 71 481-569 67-137 (367)
246 2jbw_A Dhpon-hydrolase, 2,6-di 96.7 0.0014 4.6E-08 66.6 5.7 106 441-569 85-192 (386)
247 4a0p_A LRP6, LRP-6, low-densit 96.7 0.76 2.6E-05 49.5 27.4 220 6-334 16-238 (628)
248 3fcy_A Xylan esterase 1; alpha 96.6 0.0029 1E-07 62.9 7.2 68 480-569 80-147 (346)
249 3qqz_A Putative uncharacterize 96.6 0.49 1.7E-05 44.4 21.7 65 21-100 19-83 (255)
250 3ls2_A S-formylglutathione hyd 96.5 0.002 6.7E-08 61.9 5.1 71 481-566 14-85 (280)
251 1q7f_A NHL, brain tumor CG1071 96.5 0.59 2E-05 44.3 24.6 118 158-315 143-267 (286)
252 3iii_A COCE/NOND family hydrol 96.5 0.0044 1.5E-07 65.8 7.9 36 481-521 40-75 (560)
253 1mpx_A Alpha-amino acid ester 96.5 0.0035 1.2E-07 67.8 7.1 68 481-560 24-94 (615)
254 3no2_A Uncharacterized protein 96.4 0.66 2.3E-05 44.1 26.9 181 60-334 13-196 (276)
255 2b9v_A Alpha-amino acid ester 96.4 0.0024 8.4E-08 69.4 5.3 67 481-560 36-107 (652)
256 2iwa_A Glutamine cyclotransfer 96.4 0.59 2E-05 44.1 21.1 203 177-460 23-236 (266)
257 3doh_A Esterase; alpha-beta hy 96.4 0.0061 2.1E-07 61.6 7.9 40 481-522 143-183 (380)
258 1l7a_A Cephalosporin C deacety 96.3 0.0028 9.6E-08 61.7 4.7 68 481-569 55-122 (318)
259 3i6y_A Esterase APC40077; lipa 96.3 0.0026 9E-08 61.0 4.1 71 481-566 16-87 (280)
260 2z2n_A Virginiamycin B lyase; 96.2 0.88 3E-05 43.0 32.2 191 32-331 16-211 (299)
261 2ovr_B FBW7, F-BOX/WD repeat p 96.1 1.4 4.8E-05 44.8 31.3 29 432-460 413-441 (445)
262 3trd_A Alpha/beta hydrolase; c 96.1 0.012 4.2E-07 53.3 7.4 72 481-570 5-77 (208)
263 2qe8_A Uncharacterized protein 96.0 0.28 9.5E-06 48.4 17.8 63 5-78 93-161 (343)
264 3h2g_A Esterase; xanthomonas o 95.9 0.0097 3.3E-07 60.5 6.7 80 481-569 45-130 (397)
265 3s94_A LRP-6, low-density lipo 95.9 1.2 4.2E-05 47.8 23.4 199 32-334 41-244 (619)
266 3qh4_A Esterase LIPW; structur 95.9 0.016 5.5E-07 56.9 7.9 63 480-560 58-121 (317)
267 3f67_A Putative dienelactone h 95.9 0.0048 1.6E-07 57.4 3.8 67 480-567 4-70 (241)
268 1jjf_A Xylanase Z, endo-1,4-be 95.8 0.018 6.1E-07 54.7 7.8 40 481-522 31-71 (268)
269 3nol_A Glutamine cyclotransfer 95.8 1.3 4.4E-05 41.5 20.7 113 176-334 44-156 (262)
270 3fcx_A FGH, esterase D, S-form 95.7 0.0055 1.9E-07 58.7 3.7 69 481-565 15-84 (282)
271 3ga7_A Acetyl esterase; phosph 95.7 0.022 7.5E-07 56.0 8.0 62 480-560 61-123 (326)
272 3i2k_A Cocaine esterase; alpha 95.7 0.0081 2.8E-07 64.5 5.0 67 481-565 8-75 (587)
273 4b6g_A Putative esterase; hydr 95.6 0.011 3.8E-07 56.7 5.1 68 482-565 22-90 (283)
274 2fuk_A XC6422 protein; A/B hyd 95.5 0.016 5.5E-07 52.9 5.8 74 481-569 9-82 (220)
275 3e4d_A Esterase D; S-formylglu 95.5 0.011 3.7E-07 56.4 4.7 72 481-568 14-86 (278)
276 1zi8_A Carboxymethylenebutenol 95.4 0.0052 1.8E-07 56.9 2.2 65 483-569 4-68 (236)
277 3hxk_A Sugar hydrolase; alpha- 95.4 0.01 3.5E-07 56.6 4.2 70 485-569 17-86 (276)
278 3tc9_A Hypothetical hydrolase; 95.4 0.4 1.4E-05 49.0 16.5 145 33-260 139-287 (430)
279 2z2n_A Virginiamycin B lyase; 95.3 1.9 6.6E-05 40.5 28.5 130 158-333 121-255 (299)
280 2fp8_A Strictosidine synthase; 95.3 2.3 7.7E-05 41.1 21.0 127 177-333 128-269 (322)
281 2i3d_A AGR_C_3351P, hypothetic 95.2 0.033 1.1E-06 52.1 7.1 71 481-570 20-93 (249)
282 2qm0_A BES; alpha-beta structu 95.2 0.0058 2E-07 58.7 1.7 39 481-521 17-56 (275)
283 2hm7_A Carboxylesterase; alpha 95.1 0.032 1.1E-06 54.3 6.9 68 480-565 46-114 (310)
284 2o2g_A Dienelactone hydrolase; 95.1 0.019 6.6E-07 52.3 4.9 67 480-568 10-76 (223)
285 3d0k_A Putative poly(3-hydroxy 95.0 0.013 4.5E-07 56.9 3.7 66 481-565 23-91 (304)
286 3ebl_A Gibberellin receptor GI 95.0 0.073 2.5E-06 53.3 9.2 69 480-560 62-150 (365)
287 3mve_A FRSA, UPF0255 protein V 95.0 0.018 6.2E-07 58.9 4.8 68 481-569 167-234 (415)
288 3ksr_A Putative serine hydrola 94.9 0.021 7.3E-07 54.7 4.9 65 481-570 5-69 (290)
289 3bxp_A Putative lipase/esteras 94.9 0.036 1.2E-06 52.7 6.4 69 482-566 4-75 (277)
290 2w18_A PALB2, fancn, partner a 94.7 1.4 4.6E-05 43.3 17.1 39 156-194 304-346 (356)
291 2uz0_A Esterase, tributyrin es 94.7 0.042 1.4E-06 51.6 6.2 71 481-566 6-81 (263)
292 2qc5_A Streptogramin B lactona 94.7 2.9 0.0001 39.2 27.8 130 158-333 126-260 (300)
293 4ezi_A Uncharacterized protein 94.6 0.041 1.4E-06 55.3 6.0 76 481-569 42-123 (377)
294 3ain_A 303AA long hypothetical 94.5 0.1 3.4E-06 51.2 8.7 67 480-565 63-130 (323)
295 2wir_A Pesta, alpha/beta hydro 94.5 0.082 2.8E-06 51.4 7.9 65 481-564 50-115 (313)
296 4hw6_A Hypothetical protein, I 94.4 2.1 7.3E-05 43.6 18.7 56 33-104 141-198 (433)
297 1jkm_A Brefeldin A esterase; s 94.3 0.07 2.4E-06 53.3 7.1 66 481-560 81-146 (361)
298 1k8q_A Triacylglycerol lipase, 94.2 0.15 5.2E-06 50.4 9.5 77 481-569 26-104 (377)
299 3kya_A Putative phosphatase; s 94.2 2.1 7.2E-05 44.2 18.0 62 33-104 141-210 (496)
300 1lns_A X-prolyl dipeptidyl ami 94.1 0.079 2.7E-06 58.6 7.6 28 488-520 179-208 (763)
301 2wtm_A EST1E; hydrolase; 1.60A 93.8 0.048 1.7E-06 51.0 4.6 66 484-569 3-69 (251)
302 3nol_A Glutamine cyclotransfer 93.8 2.4 8.2E-05 39.6 15.9 77 5-104 65-142 (262)
303 3s94_A LRP-6, low-density lipo 93.8 8.5 0.00029 41.1 36.0 61 32-104 128-188 (619)
304 3h04_A Uncharacterized protein 93.7 0.14 4.9E-06 47.8 7.7 66 482-565 3-68 (275)
305 1lzl_A Heroin esterase; alpha/ 93.7 0.087 3E-06 51.5 6.3 70 480-566 49-120 (323)
306 1tht_A Thioesterase; 2.10A {Vi 93.7 0.1 3.5E-06 50.7 6.8 69 482-569 7-76 (305)
307 3bjr_A Putative carboxylestera 93.6 0.021 7.3E-07 54.6 1.7 70 481-566 18-90 (283)
308 1p22_A F-BOX/WD-repeat protein 93.6 6.8 0.00023 39.4 22.7 54 35-104 136-189 (435)
309 2c7b_A Carboxylesterase, ESTE1 93.6 0.14 4.8E-06 49.6 7.6 67 481-566 47-114 (311)
310 2o7r_A CXE carboxylesterase; a 93.5 0.12 4E-06 50.9 7.0 67 480-560 53-121 (338)
311 2p4o_A Hypothetical protein; p 93.4 5.7 0.0002 37.9 22.9 41 32-80 73-113 (306)
312 3nok_A Glutaminyl cyclase; bet 93.3 1.9 6.6E-05 40.3 14.3 74 7-104 77-151 (268)
313 3mbr_X Glutamine cyclotransfer 93.1 3.9 0.00013 37.8 16.0 57 156-224 42-101 (243)
314 3tc9_A Hypothetical hydrolase; 93.1 2.4 8.1E-05 43.2 16.2 128 18-218 168-301 (430)
315 3pfb_A Cinnamoyl esterase; alp 93.0 0.078 2.7E-06 49.8 4.6 67 481-569 21-88 (270)
316 3bdi_A Uncharacterized protein 93.0 0.2 7E-06 44.6 7.3 60 489-569 10-69 (207)
317 3hlk_A Acyl-coenzyme A thioest 92.8 0.092 3.2E-06 54.1 5.2 52 494-568 160-211 (446)
318 3mbr_X Glutamine cyclotransfer 92.8 5 0.00017 37.0 16.3 77 5-104 43-120 (243)
319 3k2i_A Acyl-coenzyme A thioest 92.6 0.08 2.7E-06 54.1 4.3 52 494-568 144-195 (422)
320 3nok_A Glutaminyl cyclase; bet 92.4 3.5 0.00012 38.6 14.7 129 157-334 75-211 (268)
321 2gzs_A IROE protein; enterobac 92.3 0.079 2.7E-06 50.7 3.6 37 481-519 12-49 (278)
322 3hju_A Monoglyceride lipase; a 92.3 0.15 5.2E-06 49.9 5.8 67 481-569 33-100 (342)
323 2qc5_A Streptogramin B lactona 91.9 8.1 0.00028 36.0 25.8 49 158-219 168-219 (300)
324 3qqz_A Putative uncharacterize 91.8 8.2 0.00028 35.9 20.4 37 176-224 28-64 (255)
325 3pe6_A Monoglyceride lipase; a 91.6 0.27 9.2E-06 46.6 6.6 62 486-569 21-82 (303)
326 3sre_A PON1, serum paraoxonase 91.5 4.7 0.00016 39.7 15.5 159 7-217 85-251 (355)
327 4e15_A Kynurenine formamidase; 91.1 0.28 9.6E-06 47.2 6.2 60 482-560 58-117 (303)
328 2fp8_A Strictosidine synthase; 90.8 5.3 0.00018 38.4 15.2 66 33-104 128-202 (322)
329 2pbl_A Putative esterase/lipas 90.8 0.46 1.6E-05 44.3 7.2 63 484-565 40-102 (262)
330 3llc_A Putative hydrolase; str 90.5 0.22 7.5E-06 46.4 4.6 70 481-570 10-80 (270)
331 3c8d_A Enterochelin esterase; 90.2 0.16 5.5E-06 51.5 3.5 63 481-560 167-234 (403)
332 3fak_A Esterase/lipase, ESTE5; 90.0 0.14 4.8E-06 50.1 2.8 25 493-522 65-89 (322)
333 1jji_A Carboxylesterase; alpha 89.8 0.59 2E-05 45.2 7.2 60 481-560 55-115 (311)
334 1imj_A CIB, CCG1-interacting f 89.0 0.16 5.4E-06 45.6 2.2 61 490-569 14-74 (210)
335 2h7c_A Liver carboxylesterase 88.6 0.43 1.5E-05 50.4 5.4 54 489-560 95-149 (542)
336 2zsh_A Probable gibberellin re 88.1 0.7 2.4E-05 45.5 6.4 68 481-560 71-151 (351)
337 1p22_A F-BOX/WD-repeat protein 87.4 25 0.00085 35.1 23.4 70 6-96 154-223 (435)
338 4hw6_A Hypothetical protein, I 87.2 14 0.00047 37.5 15.7 49 157-217 250-303 (433)
339 4f0j_A Probable hydrolytic enz 86.2 1.1 3.8E-05 42.5 6.5 69 481-570 19-87 (315)
340 3fnb_A Acylaminoacyl peptidase 86.0 0.54 1.9E-05 47.5 4.3 67 481-569 134-200 (405)
341 1r88_A MPT51/MPB51 antigen; AL 85.7 1.1 3.6E-05 42.7 6.0 64 481-564 10-74 (280)
342 1jfr_A Lipase; serine hydrolas 84.4 1.2 4E-05 41.6 5.5 65 481-565 24-90 (262)
343 3kya_A Putative phosphatase; s 84.3 22 0.00075 36.6 15.4 17 178-194 313-329 (496)
344 4fol_A FGH, S-formylglutathion 84.2 0.61 2.1E-05 45.0 3.5 66 481-560 13-84 (299)
345 4hvt_A Ritya.17583.B, post-pro 84.0 18 0.00062 39.3 15.4 157 3-227 267-438 (711)
346 1kb0_A Quinohemoprotein alcoho 83.7 37 0.0013 36.6 17.8 59 4-75 282-350 (677)
347 3d59_A Platelet-activating fac 82.9 0.32 1.1E-05 48.8 0.9 55 493-567 82-136 (383)
348 3das_A Putative oxidoreductase 82.4 38 0.0013 33.0 17.8 63 32-104 33-100 (347)
349 2qru_A Uncharacterized protein 82.4 2.3 8E-05 39.9 6.8 56 486-560 8-63 (274)
350 1sfr_A Antigen 85-A; alpha/bet 81.6 2 6.9E-05 41.2 6.2 66 481-564 8-74 (304)
351 4fbl_A LIPS lipolytic enzyme; 81.3 0.82 2.8E-05 43.4 3.1 22 547-569 70-91 (281)
352 1xip_A Nucleoporin NUP159; bet 81.2 16 0.00054 36.4 12.5 69 5-98 106-174 (388)
353 1llf_A Lipase 3; candida cylin 81.0 0.99 3.4E-05 47.5 3.9 31 489-523 94-124 (534)
354 1cru_A Protein (soluble quinop 79.7 56 0.0019 33.1 16.5 17 178-194 80-99 (454)
355 4a9v_A PHOX; hydrolase, beta-p 79.5 4.4 0.00015 42.3 8.0 70 32-105 477-549 (592)
356 3a9g_A Putative uncharacterize 79.4 33 0.0011 33.5 14.3 60 32-104 30-93 (354)
357 3zwu_A Alkaline phosphatase PH 79.1 3.6 0.00012 43.5 7.3 68 33-105 478-549 (592)
358 2fx5_A Lipase; alpha-beta hydr 77.3 1.1 3.8E-05 41.7 2.7 51 497-565 34-85 (258)
359 2ha2_A ACHE, acetylcholinester 77.1 2.3 7.7E-05 44.8 5.2 55 489-560 93-148 (543)
360 3i28_A Epoxide hydrolase 2; ar 76.7 4.8 0.00016 41.8 7.6 64 481-570 236-299 (555)
361 1xip_A Nucleoporin NUP159; bet 76.7 4.4 0.00015 40.5 6.9 78 6-104 147-231 (388)
362 3a9g_A Putative uncharacterize 76.4 59 0.002 31.6 20.3 67 177-260 75-151 (354)
363 1thg_A Lipase; hydrolase(carbo 75.9 1.9 6.6E-05 45.4 4.2 32 489-524 102-133 (544)
364 3sre_A PON1, serum paraoxonase 75.7 35 0.0012 33.4 13.0 151 156-333 82-252 (355)
365 1ukc_A ESTA, esterase; fungi, 74.8 2.5 8.5E-05 44.3 4.7 31 489-523 82-112 (522)
366 1qe3_A PNB esterase, para-nitr 74.7 1.8 6.1E-05 45.0 3.5 54 489-560 79-133 (489)
367 1ufo_A Hypothetical protein TT 74.2 2 6.7E-05 38.8 3.4 60 485-569 5-64 (238)
368 3vis_A Esterase; alpha/beta-hy 73.8 1.9 6.6E-05 41.3 3.3 55 490-566 79-133 (306)
369 3ia2_A Arylesterase; alpha-bet 73.7 5.2 0.00018 37.0 6.3 59 486-570 2-60 (271)
370 2ogt_A Thermostable carboxyles 73.5 2.8 9.5E-05 43.6 4.6 54 489-560 81-135 (498)
371 1a88_A Chloroperoxidase L; hal 72.7 6.7 0.00023 36.3 6.9 60 487-570 3-62 (275)
372 3das_A Putative oxidoreductase 72.6 73 0.0025 30.9 18.5 78 245-329 143-231 (347)
373 3gff_A IROE-like serine hydrol 72.3 2.6 8.9E-05 41.1 3.9 38 481-520 11-50 (331)
374 1zoi_A Esterase; alpha/beta hy 71.5 7.4 0.00025 36.1 6.9 60 487-570 4-63 (276)
375 2jnz_A PHL P 3 allergen; timot 71.4 6.9 0.00023 30.8 5.3 70 441-511 28-104 (108)
376 3qit_A CURM TE, polyketide syn 70.5 5.3 0.00018 36.7 5.6 58 489-570 10-67 (286)
377 2e3j_A Epoxide hydrolase EPHB; 70.4 7.7 0.00026 37.8 7.0 61 488-570 8-68 (356)
378 2p9w_A MAL S 1 allergenic prot 70.0 81 0.0028 30.4 19.2 63 32-104 14-83 (334)
379 2d81_A PHB depolymerase; alpha 69.3 1.5 5.3E-05 42.5 1.4 32 490-522 199-230 (318)
380 3d7r_A Esterase; alpha/beta fo 69.1 2.2 7.4E-05 41.4 2.5 22 495-522 84-105 (326)
381 3vdx_A Designed 16NM tetrahedr 68.6 6.8 0.00023 40.0 6.3 63 483-571 4-66 (456)
382 1q0r_A RDMC, aclacinomycin met 68.3 5.7 0.0002 37.5 5.4 58 489-569 7-64 (298)
383 1ea5_A ACHE, acetylcholinester 67.4 8.3 0.00028 40.4 6.7 54 489-560 91-145 (537)
384 1p0i_A Cholinesterase; serine 67.4 4.7 0.00016 42.2 4.8 54 489-560 89-143 (529)
385 2ad6_A Methanol dehydrogenase 67.2 1E+02 0.0035 32.2 15.3 57 6-75 273-339 (571)
386 3ft1_A PHL P 3 allergen; beta- 65.5 12 0.00041 29.0 5.5 72 440-511 16-93 (100)
387 3k6k_A Esterase/lipase; alpha/ 65.0 4.4 0.00015 39.1 3.8 12 549-560 104-116 (322)
388 1a8s_A Chloroperoxidase F; hal 64.8 11 0.00039 34.6 6.6 57 487-569 3-59 (273)
389 2y6u_A Peroxisomal membrane pr 64.6 2.9 9.9E-05 41.5 2.5 66 485-569 23-99 (398)
390 3dkr_A Esterase D; alpha beta 63.4 3.4 0.00012 37.4 2.5 22 547-569 41-62 (251)
391 2fj0_A JuvenIle hormone estera 62.2 4 0.00014 43.0 3.0 36 513-560 115-150 (551)
392 4i19_A Epoxide hydrolase; stru 62.1 8.1 0.00028 38.5 5.2 61 489-571 74-143 (388)
393 2ism_A Putative oxidoreductase 61.6 1E+02 0.0034 29.8 13.1 67 32-104 76-151 (352)
394 3bwx_A Alpha/beta hydrolase; Y 61.0 11 0.00039 35.0 5.8 65 482-570 5-69 (285)
395 2bce_A Cholesterol esterase; h 60.1 4.6 0.00016 42.8 3.0 34 487-524 75-109 (579)
396 1tca_A Lipase; hydrolase(carbo 59.1 1.5 5E-05 42.6 -0.9 60 491-568 12-72 (317)
397 1qlw_A Esterase; anisotropic r 58.8 5.9 0.0002 38.3 3.4 22 547-569 88-109 (328)
398 2yys_A Proline iminopeptidase- 57.7 12 0.0004 35.1 5.3 64 483-570 3-66 (286)
399 3r0v_A Alpha/beta hydrolase fo 56.6 20 0.00068 32.3 6.6 59 485-570 5-63 (262)
400 3fob_A Bromoperoxidase; struct 56.0 14 0.00047 34.3 5.5 22 548-570 47-68 (281)
401 3guu_A Lipase A; protein struc 55.6 16 0.00053 37.4 6.0 38 481-522 74-115 (462)
402 1a8q_A Bromoperoxidase A1; hal 55.4 14 0.00049 33.9 5.4 57 487-569 3-59 (274)
403 1vkh_A Putative serine hydrola 55.1 4.7 0.00016 37.5 2.0 16 548-564 66-85 (273)
404 3q6k_A 43.2 kDa salivary prote 55.1 67 0.0023 31.7 10.3 89 4-104 122-241 (381)
405 3i1i_A Homoserine O-acetyltran 54.6 11 0.00038 36.5 4.8 20 549-569 79-98 (377)
406 3sty_A Methylketone synthase 1 54.0 6.5 0.00022 35.9 2.7 24 548-572 32-55 (267)
407 3u1t_A DMMA haloalkane dehalog 53.7 23 0.00077 32.9 6.6 22 548-570 49-70 (309)
408 2qjw_A Uncharacterized protein 53.5 5 0.00017 34.2 1.7 21 548-569 26-46 (176)
409 2wfl_A Polyneuridine-aldehyde 53.3 7.8 0.00027 35.8 3.2 21 548-569 30-50 (264)
410 1auo_A Carboxylesterase; hydro 52.9 16 0.00054 32.1 5.1 17 548-565 34-52 (218)
411 3g02_A Epoxide hydrolase; alph 52.1 17 0.00058 36.5 5.6 60 490-571 92-157 (408)
412 3bix_A Neuroligin-1, neuroligi 51.6 6.4 0.00022 41.7 2.4 54 489-560 108-165 (574)
413 2rau_A Putative esterase; NP_3 50.2 7.6 0.00026 37.6 2.6 22 547-569 85-106 (354)
414 3qmv_A Thioesterase, REDJ; alp 49.5 5.8 0.0002 37.0 1.6 71 481-569 14-90 (280)
415 2vat_A Acetyl-COA--deacetylcep 47.9 18 0.00063 36.4 5.2 16 550-566 137-152 (444)
416 3r40_A Fluoroacetate dehalogen 47.9 40 0.0014 31.0 7.4 60 486-572 16-75 (306)
417 2p9w_A MAL S 1 allergenic prot 47.7 2E+02 0.0068 27.7 17.4 163 178-371 16-203 (334)
418 1dx4_A ACHE, acetylcholinester 47.6 8.5 0.00029 40.8 2.6 37 512-560 140-177 (585)
419 1mtz_A Proline iminopeptidase; 47.1 26 0.00089 32.4 5.9 20 549-569 49-68 (293)
420 1xkl_A SABP2, salicylic acid-b 46.4 14 0.00048 34.3 3.7 22 548-570 24-45 (273)
421 4g9e_A AHL-lactonase, alpha/be 46.3 13 0.00043 34.0 3.4 22 548-570 44-65 (279)
422 3om8_A Probable hydrolase; str 45.9 49 0.0017 30.2 7.6 60 486-570 8-67 (266)
423 3dqz_A Alpha-hydroxynitrIle ly 45.3 12 0.0004 34.0 2.9 24 547-571 23-46 (258)
424 3c6x_A Hydroxynitrilase; atomi 43.7 14 0.00048 33.9 3.3 22 548-570 23-44 (257)
425 4fle_A Esterase; structural ge 42.9 8.4 0.00029 33.8 1.5 21 548-569 24-46 (202)
426 1azw_A Proline iminopeptidase; 42.8 39 0.0013 31.6 6.4 62 483-569 12-73 (313)
427 2ism_A Putative oxidoreductase 42.8 2.3E+02 0.008 27.1 19.8 68 177-260 77-151 (352)
428 1b6g_A Haloalkane dehalogenase 42.7 36 0.0012 32.2 6.1 22 548-570 67-88 (310)
429 2cjp_A Epoxide hydrolase; HET: 42.6 26 0.0009 33.2 5.2 56 488-569 16-71 (328)
430 2xt0_A Haloalkane dehalogenase 42.5 35 0.0012 31.9 6.0 22 548-570 66-87 (297)
431 1wm1_A Proline iminopeptidase; 42.2 40 0.0014 31.5 6.4 62 483-569 15-76 (317)
432 1fj2_A Protein (acyl protein t 41.5 17 0.00058 32.3 3.4 18 548-566 43-60 (232)
433 3g9x_A Haloalkane dehalogenase 40.4 34 0.0012 31.4 5.5 56 490-570 17-72 (299)
434 2ocg_A Valacyclovir hydrolase; 40.2 19 0.00065 32.6 3.6 21 548-569 44-64 (254)
435 2b61_A Homoserine O-acetyltran 39.5 10 0.00035 36.9 1.7 16 550-566 93-108 (377)
436 3hss_A Putative bromoperoxidas 39.5 23 0.0008 32.6 4.2 21 548-569 64-84 (293)
437 3e0x_A Lipase-esterase related 38.8 32 0.0011 30.4 4.9 20 549-570 36-55 (245)
438 3cn9_A Carboxylesterase; alpha 38.6 18 0.00061 32.1 3.0 18 548-566 44-63 (226)
439 1uxo_A YDEN protein; hydrolase 38.5 17 0.00058 31.2 2.8 16 549-565 27-42 (192)
440 1yiq_A Quinohemoprotein alcoho 37.5 4E+02 0.014 28.3 19.1 52 157-221 455-508 (689)
441 3nwo_A PIP, proline iminopepti 37.3 31 0.0011 32.9 4.8 61 490-570 35-96 (330)
442 1brt_A Bromoperoxidase A2; hal 36.8 28 0.00096 32.0 4.2 22 548-570 43-64 (277)
443 3rm3_A MGLP, thermostable mono 36.7 20 0.00067 32.8 3.1 22 547-569 59-80 (270)
444 2hz6_A Endoplasmic reticulum t 36.6 23 0.0008 34.7 3.7 11 210-220 184-194 (369)
445 2qs9_A Retinoblastoma-binding 36.5 20 0.00069 30.9 2.9 18 548-566 28-46 (194)
446 1cru_A Protein (soluble quinop 36.2 1.2E+02 0.0042 30.6 9.2 63 32-104 28-97 (454)
447 2pl5_A Homoserine O-acetyltran 34.1 37 0.0013 32.6 4.7 19 550-569 84-104 (366)
448 1ys1_X Lipase; CIS peptide Leu 33.4 30 0.001 33.2 3.8 22 547-569 33-54 (320)
449 1tqh_A Carboxylesterase precur 32.3 21 0.00071 32.4 2.4 21 548-569 36-56 (247)
450 4dnp_A DAD2; alpha/beta hydrol 32.2 28 0.00097 31.3 3.4 20 548-569 40-59 (269)
451 3icv_A Lipase B, CALB; circula 32.2 16 0.00054 35.2 1.6 20 548-568 87-106 (316)
452 2vpj_A Kelch-like protein 12; 31.2 3.1E+02 0.011 25.1 16.2 69 3-81 76-147 (301)
453 3kxp_A Alpha-(N-acetylaminomet 31.2 69 0.0024 29.8 6.1 55 489-570 54-108 (314)
454 3kda_A CFTR inhibitory factor 30.4 90 0.0031 28.5 6.7 57 487-570 14-70 (301)
455 3qvm_A OLEI00960; structural g 30.0 37 0.0013 30.7 3.8 21 548-570 48-68 (282)
456 1dqz_A 85C, protein (antigen 8 30.0 70 0.0024 29.5 5.8 64 481-564 5-69 (280)
457 1n10_A PHL P I, pollen allerge 29.8 83 0.0028 28.7 5.9 72 440-511 160-238 (241)
458 3zwu_A Alkaline phosphatase PH 29.0 60 0.002 34.2 5.4 34 18-51 518-551 (592)
459 3b5e_A MLL8374 protein; NP_108 28.8 63 0.0022 28.2 5.1 53 491-566 14-66 (223)
460 3hxj_A Pyrrolo-quinoline quino 28.7 3.4E+02 0.012 24.8 21.5 239 7-369 80-320 (330)
461 1kb0_A Quinohemoprotein alcoho 27.1 2.2E+02 0.0074 30.4 9.7 80 5-104 457-537 (677)
462 1flg_A Protein (quinoprotein e 26.4 5.6E+02 0.019 26.5 18.5 58 5-75 291-359 (582)
463 1yiq_A Quinohemoprotein alcoho 25.9 2E+02 0.0069 30.8 9.2 81 5-104 455-535 (689)
464 2g8s_A Glucose/sorbosone dehyd 25.6 1E+02 0.0034 29.9 6.2 63 32-104 19-86 (353)
465 4a9v_A PHOX; hydrolase, beta-p 25.4 82 0.0028 32.9 5.5 34 18-51 518-551 (592)
466 2r11_A Carboxylesterase NP; 26 25.1 1.2E+02 0.004 28.1 6.5 18 548-567 87-104 (306)
467 4h0c_A Phospholipase/carboxyle 24.7 12 0.00042 33.4 -0.7 18 548-566 42-59 (210)
468 3oos_A Alpha/beta hydrolase fa 24.4 1.1E+02 0.0037 27.3 5.9 21 548-570 43-63 (278)
469 2vpj_A Kelch-like protein 12; 24.3 4.1E+02 0.014 24.2 22.2 68 4-81 30-100 (301)
470 4g4g_A 4-O-methyl-glucuronoyl 24.1 72 0.0025 31.8 4.6 30 485-520 114-145 (433)
471 2xua_A PCAD, 3-oxoadipate ENOL 24.1 1.4E+02 0.0047 27.0 6.6 60 489-571 8-67 (266)
472 3og9_A Protein YAHD A copper i 22.7 80 0.0027 27.3 4.5 16 548-565 36-51 (209)
473 2f40_A Hypothetical protein PF 21.8 29 0.00098 25.6 0.9 30 550-588 43-72 (96)
474 3ibt_A 1H-3-hydroxy-4-oxoquino 21.7 1.1E+02 0.0037 27.3 5.3 56 490-570 6-61 (264)
475 3pic_A CIP2; alpha/beta hydrol 21.4 84 0.0029 30.8 4.4 24 493-520 90-113 (375)
476 4fhz_A Phospholipase/carboxyle 21.2 49 0.0017 31.1 2.7 57 489-566 46-105 (285)
477 1ex9_A Lactonizing lipase; alp 21.1 56 0.0019 30.5 3.2 21 547-568 31-51 (285)
478 3l80_A Putative uncharacterize 20.9 41 0.0014 30.9 2.2 20 549-570 64-83 (292)
479 2h1i_A Carboxylesterase; struc 20.7 68 0.0023 28.0 3.6 13 548-562 58-70 (226)
480 1ycd_A Hypothetical 27.3 kDa p 20.6 27 0.00094 31.4 0.8 19 548-567 29-47 (243)
481 1mj5_A 1,3,4,6-tetrachloro-1,4 20.1 1.5E+02 0.0051 26.9 6.0 58 486-570 12-69 (302)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=5.9e-30 Score=287.35 Aligned_cols=428 Identities=10% Similarity=-0.017 Sum_probs=260.8
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCC--cc--cceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGA--KI--NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~--~~--~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~ 81 (595)
.|+++|+. +|+.+++....... .. ..+.|||||++|||......-- ......++|++|+++|+.++|+...
T Consensus 37 ~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~-r~~~~~~~~~~d~~~~~~~~l~~~~ 111 (740)
T 4a5s_A 37 NILVFNAE----YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW-RHSYTASYDIYDLNKRQLITEERIP 111 (740)
T ss_dssp EEEEEETT----TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECS-SSCEEEEEEEEETTTTEECCSSCCC
T ss_pred cEEEEECC----CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeE-EEccceEEEEEECCCCcEEEcccCC
Confidence 58999998 77777664322211 12 2379999999999987631100 0012368999999999998887654
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEE
Q 007620 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (595)
Q Consensus 82 ~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (595)
. .+..+.|||||+.|+|.. ...||+
T Consensus 112 ~-----~~~~~~~SPdG~~la~~~--------------------------------------------------~~~i~~ 136 (740)
T 4a5s_A 112 N-----NTQWVTWSPVGHKLAYVW--------------------------------------------------NNDIYV 136 (740)
T ss_dssp T-----TEEEEEECSSTTCEEEEE--------------------------------------------------TTEEEE
T ss_pred C-----cceeeEECCCCCEEEEEE--------------------------------------------------CCeEEE
Confidence 3 466899999999999972 124777
Q ss_pred EcC-CCCeeecCCCC----ee----------------eeeEECCCCCeEEEEEcccCcccc--c----------c-----
Q 007620 162 GSL-DGTAKDFGTPA----VY----------------TAVEPSPDQKYVLITSMHRPYSYK--V----------P----- 203 (595)
Q Consensus 162 ~d~-~g~~~~lt~~~----~~----------------~~~~~SpDg~~l~~~~~~~~~~~~--~----------~----- 203 (595)
+++ +|+.++|+..+ .+ ..+.|||||++|+|.+.+...... + +
T Consensus 137 ~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~ 216 (740)
T 4a5s_A 137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV 216 (740)
T ss_dssp ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred EECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceee
Confidence 777 45677776432 11 248899999999998754321000 0 0
Q ss_pred -C---c--ccceeEEEEcCCC---c---eEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccc
Q 007620 204 -C---A--RFSQKVQVWTTDG---K---LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVE 271 (595)
Q Consensus 204 -~---~--~~~~~l~~~d~~g---~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~ 271 (595)
+ + .....|+++|+++ + +.+.+.... .+.+.......+.|+|||+. +++.....
T Consensus 217 ~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~wspdg~~-~~~~~~r~------- 281 (740)
T 4a5s_A 217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA-------SMLIGDHYLCDVTWATQERI-SLQWLRRI------- 281 (740)
T ss_dssp ECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH-------HHHTSCEEEEEEEEEETTEE-EEEEEESS-------
T ss_pred cCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc-------cCCCCCeEEEEEEEeCCCeE-EEEEeCCC-------
Confidence 0 0 0123799999988 7 555553210 00000011235789999984 33321111
Q ss_pred cCCcceEEeccCCCCCCCC-------ceecc-c-cCcc-----ccceeecCCCcEEE-EEEeecccceEEEEEeCCCCCC
Q 007620 272 VSPRDIIYTQPAEPAEGEK-------PEILH-K-LDLR-----FRSVSWCDDSLALV-NETWYKTSQTRTWLVCPGSKDV 336 (595)
Q Consensus 272 ~~~~~~~~~~d~~~~~g~~-------~~~l~-~-~~~~-----~~~~~wspDg~~l~-~~~~~~~~~~~L~~~d~~~~~~ 336 (595)
.....|+++|+ ++|+ .+.+. . .... ...+.|||||+.++ +.+ .+.+..+||++|+++ +
T Consensus 282 -~~~~~i~~~d~---~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s-~~~G~~~l~~~~~~~--~ 354 (740)
T 4a5s_A 282 -QNYSVMDICDY---DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS-NEEGYRHICYFQIDK--K 354 (740)
T ss_dssp -TTEEEEEEEEE---ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE-CTTSCEEEEEEETTC--S
T ss_pred -CCEEEEEEEEC---CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE-cCCCceEEEEEECCC--C
Confidence 11235777786 4445 23332 1 1222 24789999999876 443 345678999999998 4
Q ss_pred CcEEEeecccccccCCCCCCCeeeCCCCCEEEEEeee--cCCcccEEEEecCCCCCCCCcceeEeeecCCCcee-eeeec
Q 007620 337 APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK--ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE-RIWES 413 (595)
Q Consensus 337 ~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~--~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~-~l~~~ 413 (595)
+.+.|+....... ..+..||+.|+|.+.. .......| +++++.+++.+ +|+..
T Consensus 355 ~~~~lT~g~~~v~--------~~~~~d~~~i~f~~~~~~~~~~~~~l----------------y~v~~~g~~~~~~lt~~ 410 (740)
T 4a5s_A 355 DCTFITKGTWEVI--------GIEALTSDYLYYISNEYKGMPGGRNL----------------YKIQLIDYTKVTCLSCE 410 (740)
T ss_dssp SCEESCCSSSCEE--------EEEEECSSEEEEEESCGGGCTTCBEE----------------EEEETTEEEEEEESSTT
T ss_pred ceEecccCCEEEE--------EEEEEeCCEEEEEEecCCCCCceeEE----------------EEEECCCCCcceeeccc
Confidence 5677764432110 1122458888888754 11112234 45676555443 45432
Q ss_pred CccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCCC---CCcCCC-ceEEEEEEC
Q 007620 414 NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY---PTLASL-QKEMIKYQR 489 (595)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~~---~~~~~~-~~e~v~~~~ 489 (595)
... ...... ...||+++++++++.++.. |+.+++++..+++..+++..|... .....+ .++.+++ +
T Consensus 411 ~~~-~~~~~~-------~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~ 480 (740)
T 4a5s_A 411 LNP-ERCQYY-------SVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-I 480 (740)
T ss_dssp TST-TTBCBE-------EEEECTTSSEEEEEECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-E
T ss_pred cCC-CCCceE-------EEEECCCCCEEEEEeCCCC-CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-c
Confidence 100 001111 2468999999999998877 889999998878777776654221 112224 6788888 7
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcc---cCCCCchhHHHh-ccCeEEEeCCCCc
Q 007620 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF---SGMTPTSSLIFL-ARRFAVLAGPSIP 565 (595)
Q Consensus 490 ~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~---~~~~~~~~q~la-~~GY~Vl~~~~~~ 565 (595)
.||.+|+++|++|+++++++++ |+||++|++ |... ..+.....++++ ++||+|+. ++.+
T Consensus 481 ~dg~~l~~~~~~P~~~~~~~~~--P~vv~~HGg--------------~~~~~~~~~~~~~~~~~l~~~~G~~Vv~-~D~r 543 (740)
T 4a5s_A 481 LNETKFWYQMILPPHFDKSKKY--PLLLDVYAG--------------PCSQKADTVFRLNWATYLASTENIIVAS-FDGR 543 (740)
T ss_dssp ETTEEEEEEEEECTTCCTTSCE--EEEEECCCC--------------TTCCCCCCCCCCSHHHHHHHTTCCEEEE-ECCT
T ss_pred cCCeEEEEEEEeCCCCCCCCCc--cEEEEECCC--------------CcccccccccCcCHHHHHHhcCCeEEEE-EcCC
Confidence 8999999999999999887756 999997753 2211 111222345666 59999999 5544
Q ss_pred e
Q 007620 566 I 566 (595)
Q Consensus 566 ~ 566 (595)
.
T Consensus 544 G 544 (740)
T 4a5s_A 544 G 544 (740)
T ss_dssp T
T ss_pred C
Confidence 3
No 2
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=1e-28 Score=277.60 Aligned_cols=419 Identities=12% Similarity=0.108 Sum_probs=269.2
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCC-----------------------CcccceEEccCCCEEEEEEecccccccCCCc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDG-----------------------AKINFVSWSPDGKRIAFSVRVDEEDNVSSCK 61 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~-----------------------~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~ 61 (595)
..||+.|+. +|+.++++..... ..+..+.|||||++|+|.+.
T Consensus 64 ~~i~~~d~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----------- 128 (741)
T 2ecf_A 64 LDLWSYDIG----SGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG----------- 128 (741)
T ss_dssp EEEEEEETT----TCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-----------
T ss_pred cEEEEEECC----CCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-----------
Confidence 479999998 7888888743222 12678999999999999862
Q ss_pred eEEEEEECCCC---ceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccc
Q 007620 62 LRVWIADAETG---EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (595)
Q Consensus 62 ~~L~v~d~~~g---~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 138 (595)
.+||+++++++ +.++++.... .+..+.|||||+.|+|...
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~SPDG~~la~~~~-------------------------------- 171 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEG-----FATDAKLSPKGGFVSFIRG-------------------------------- 171 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSS-----CEEEEEECTTSSEEEEEET--------------------------------
T ss_pred CcEEEEECCCCCcceEEEcccCCc-----ccccccCCCCCCEEEEEeC--------------------------------
Confidence 68999999998 7888865543 4678999999999999621
Q ss_pred cccccCcCCccceEEeecceEEEEcC-CCCeeecCCCCe------------------eeeeEECCCCCeEEEEEcccCcc
Q 007620 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAV------------------YTAVEPSPDQKYVLITSMHRPYS 199 (595)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~~~~------------------~~~~~~SpDg~~l~~~~~~~~~~ 199 (595)
.+|+++++ +|+.++++.... ...++|||||++|++........
T Consensus 172 ------------------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~ 233 (741)
T 2ecf_A 172 ------------------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPV 233 (741)
T ss_dssp ------------------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTS
T ss_pred ------------------CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCC
Confidence 25777777 456666654321 25689999999999987543100
Q ss_pred cc---------------ccC-----cccceeEEEEcCCC-ceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEE
Q 007620 200 YK---------------VPC-----ARFSQKVQVWTTDG-KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (595)
Q Consensus 200 ~~---------------~~~-----~~~~~~l~~~d~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~ 258 (595)
.. +.+ ......|+++|+++ ++.+.+...... ......+.| |||+. |+
T Consensus 234 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~----------~~~~~~~~~-pDg~~-l~ 301 (741)
T 2ecf_A 234 PVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQ----------DIYLARVNW-RDPQH-LS 301 (741)
T ss_dssp CEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCS----------SEEEEEEEE-EETTE-EE
T ss_pred ceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCc----------ceEEEEEEe-CCCCE-EE
Confidence 00 000 00123799999988 876665422100 011245899 99985 55
Q ss_pred EEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCc-----cccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-----RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 259 ~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~-----~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
+... +.. .....++++|+ .+++.+.+..... ....+.|||||+. ++... ..+..+||.+++++
T Consensus 302 ~~~~-~~~------~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~-~~~~~-~~g~~~l~~~~~~~ 369 (741)
T 2ecf_A 302 FQRQ-SRD------QKKLDLVEVTL---ASNQQRVLAHETSPTWVPLHNSLRFLDDGSI-LWSSE-RTGFQHLYRIDSKG 369 (741)
T ss_dssp EEEE-ETT------SSEEEEEEEET---TTCCEEEEEEEECSSCCCCCSCCEECTTSCE-EEEEC-TTSSCEEEEECSSS
T ss_pred EEEe-ccc------CCeEEEEEEEC---CCCceEEEEEcCCCCcCCcCCceEECCCCeE-EEEec-CCCccEEEEEcCCC
Confidence 4422 111 12346788886 4456665543221 2357899999994 44332 34557999999876
Q ss_pred CCCCcEEEeecc--cccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeee
Q 007620 334 KDVAPRVLFDRV--FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 411 (595)
Q Consensus 334 ~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (595)
+ .+.|.... +.. ...|++||+.|++.....+.....+| .+++..+..+.|.
T Consensus 370 --~-~~~l~~~~~~v~~--------~~~~s~dg~~l~~~~~~~~~~~~~l~----------------~~~~~g~~~~~l~ 422 (741)
T 2ecf_A 370 --K-AAALTHGNWSVDE--------LLAVDEKAGLAYFRAGIESARESQIY----------------AVPLQGGQPQRLS 422 (741)
T ss_dssp --C-EEESCCSSSCEEE--------EEEEETTTTEEEEEECSSCTTCBEEE----------------EEETTCCCCEECC
T ss_pred --C-eeeeeecceEEEe--------EeEEeCCCCEEEEEEeCCCCceEEEE----------------EEEcCCCCeeecc
Confidence 3 45554322 222 12599999999887753221123444 4454333345554
Q ss_pred ecCccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCC-C---CCCcC--CC-ceEE
Q 007620 412 ESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPH-P---YPTLA--SL-QKEM 484 (595)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~-~---~~~~~--~~-~~e~ 484 (595)
.. ..+.. ..||+|++++++..++...|+++|+++..++..+.|+.... . ..+.. .+ .+|.
T Consensus 423 ~~------~~~~~-------~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 489 (741)
T 2ecf_A 423 KA------PGMHS-------ASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEF 489 (741)
T ss_dssp CS------CSEEE-------EEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEE
T ss_pred cC------CCceE-------EEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEE
Confidence 31 11111 46899999999999999999999999987666666765432 0 12222 45 8999
Q ss_pred EEEECCCC-cEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCC-chhHHHhccCeEEEeCC
Q 007620 485 IKYQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVLAGP 562 (595)
Q Consensus 485 v~~~~~DG-~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~-~~~q~la~~GY~Vl~~~ 562 (595)
++|++.|| .+|++++++|.++++++++ |+||++|+++.+ ......|..... ...+.||++||+|+. +
T Consensus 490 ~~~~~~~g~~~l~~~~~~P~~~~~~~~~--p~vv~~hG~~~~--------~~~~~~~~~~~~~~~~~~l~~~G~~v~~-~ 558 (741)
T 2ecf_A 490 GTLTAADGKTPLNYSVIKPAGFDPAKRY--PVAVYVYGGPAS--------QTVTDSWPGRGDHLFNQYLAQQGYVVFS-L 558 (741)
T ss_dssp EEEECTTSSCEEEEEEECCSSCCTTSCE--EEEEECCCSTTC--------CSCSSCCCCSHHHHHHHHHHHTTCEEEE-E
T ss_pred EEEEcCCCCEEEEEEEEeCCCCCCCCCc--CEEEEEcCCCCc--------ccccccccccchhHHHHHHHhCCCEEEE-E
Confidence 99999999 9999999999998776645 999997753110 000111110000 246899999999999 6
Q ss_pred CCceee
Q 007620 563 SIPIIG 568 (595)
Q Consensus 563 ~~~~~~ 568 (595)
+.+..|
T Consensus 559 d~rG~g 564 (741)
T 2ecf_A 559 DNRGTP 564 (741)
T ss_dssp CCTTCS
T ss_pred ecCCCC
Confidence 655444
No 3
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.97 E-value=3.2e-27 Score=263.89 Aligned_cols=418 Identities=12% Similarity=0.077 Sum_probs=259.9
Q ss_pred eeEEEecCCCCCCCCc--eeeecCCCC---------------CcccceEEccCCCEEEEEEecccccccCCCceEEEEEE
Q 007620 6 GIGIHRLLPDDSLGPE--KEVHGYPDG---------------AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIAD 68 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~--~~lt~~~~~---------------~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d 68 (595)
+| +.|+. +|+. +.+...... ..+..++|||| ++|+|... ..|+++|
T Consensus 45 ~i-~~d~~----tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~-----------~~i~~~d 107 (706)
T 2z3z_A 45 DL-VFNKA----NGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQ-----------GGLVGFD 107 (706)
T ss_dssp EE-EEEC-----------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEET-----------TEEEEEE
T ss_pred cE-EEECC----CCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEEC-----------CEEEEEE
Confidence 47 78887 7766 666532110 24778999999 88888752 6899999
Q ss_pred CCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCc
Q 007620 69 AETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDE 148 (595)
Q Consensus 69 ~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~ 148 (595)
+++++.++++.... .+..+.|||||+.|+|..
T Consensus 108 ~~~~~~~~l~~~~~-----~~~~~~~SpdG~~la~~~------------------------------------------- 139 (706)
T 2z3z_A 108 MLARKVTYLFDTNE-----ETASLDFSPVGDRVAYVR------------------------------------------- 139 (706)
T ss_dssp TTTTEEEEEECCTT-----CCTTCEECTTSSEEEEEE-------------------------------------------
T ss_pred CCCCceEEccCCcc-----cccCCcCCCCCCEEEEEE-------------------------------------------
Confidence 99999888875543 467899999999999852
Q ss_pred cceEEeecceEEEEcC-C-----CCeeecCCCC-e---------------eeeeEECCCCCeEEEEEcccCccccc----
Q 007620 149 SLFDYYTTAQLVLGSL-D-----GTAKDFGTPA-V---------------YTAVEPSPDQKYVLITSMHRPYSYKV---- 202 (595)
Q Consensus 149 ~~~~~~~~~~l~~~d~-~-----g~~~~lt~~~-~---------------~~~~~~SpDg~~l~~~~~~~~~~~~~---- 202 (595)
...|+++++ + |+.++++... . ...+.|||||++|++...+.......
T Consensus 140 -------~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~ 212 (706)
T 2z3z_A 140 -------NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVD 212 (706)
T ss_dssp -------TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEE
T ss_pred -------CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeec
Confidence 124666676 5 6566655332 1 35789999999999987432100000
Q ss_pred -----------cC-----cccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCC
Q 007620 203 -----------PC-----ARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (595)
Q Consensus 203 -----------~~-----~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (595)
.+ ......|++||+++++.+.+....... .....+.|+|||+. |++.. .+..
T Consensus 213 ~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~----------~~~~~~~~spdg~~-l~~~~-~~~~ 280 (706)
T 2z3z_A 213 YHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE----------KFLTNLSWSPDENI-LYVAE-VNRA 280 (706)
T ss_dssp CCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT----------CEEEEEEECTTSSE-EEEEE-ECTT
T ss_pred cCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc----------eeEeeEEEECCCCE-EEEEE-eCCC
Confidence 00 011357999999988877664321000 11246899999984 55432 2211
Q ss_pred CcccccCCcceEEeccCCCCCCC-Cceecccc-Cc----cccceeecC--CCcEEEEEEeecccceEEEEEeCCCCCCCc
Q 007620 267 DANVEVSPRDIIYTQPAEPAEGE-KPEILHKL-DL----RFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (595)
Q Consensus 267 ~~~~~~~~~~~~~~~d~~~~~g~-~~~~l~~~-~~----~~~~~~wsp--Dg~~l~~~~~~~~~~~~L~~~d~~~~~~~~ 338 (595)
.....++++|+ .++ ..+.+... .. ....+.||| ||+.++... ..+..+||.+++++ +..
T Consensus 281 ------~~~~~v~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~--~~g~~~l~~~~~~~--~~~ 347 (706)
T 2z3z_A 281 ------QNECKVNAYDA---ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR--RDGWNHLYLYDTTG--RLI 347 (706)
T ss_dssp ------SCEEEEEEEET---TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC--TTSSCEEEEEETTS--CEE
T ss_pred ------CCeeEEEEEEC---CCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc--cCCccEEEEEECCC--CEE
Confidence 11236777886 444 44444321 11 125689999 998554432 23567999999766 344
Q ss_pred EEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCcccc
Q 007620 339 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKY 418 (595)
Q Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 418 (595)
+.|......- . ..+.|++||+.|++.....+.....+| .+|+.+++.+.|....
T Consensus 348 ~~l~~~~~~v-~-----~~~~~spdg~~l~~~~~~~~~~~~~l~----------------~~d~~~~~~~~l~~~~---- 401 (706)
T 2z3z_A 348 RQVTKGEWEV-T-----NFAGFDPKGTRLYFESTEASPLERHFY----------------CIDIKGGKTKDLTPES---- 401 (706)
T ss_dssp EECCCSSSCE-E-----EEEEECTTSSEEEEEESSSCTTCBEEE----------------EEETTCCCCEESCCSS----
T ss_pred EecCCCCeEE-E-----eeeEEcCCCCEEEEEecCCCCceEEEE----------------EEEcCCCCceeccCCC----
Confidence 5554322110 0 015899999999888753211112344 5677777766664221
Q ss_pred ceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCCCCCcCCC-ceEEEEEECCCC-cEEE
Q 007620 419 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASL-QKEMIKYQRKDG-VPLT 496 (595)
Q Consensus 419 ~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~~~~~~~~-~~e~v~~~~~DG-~~i~ 496 (595)
.+.. ..||+|++++++..++...|++++++++.+++.+.++..+ +. ....+ .++.+++++.|| .+|+
T Consensus 402 --~~~~-------~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~~~~~ 470 (706)
T 2z3z_A 402 --GMHR-------TQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKN-PD-TGYAMPEIRTGTIMAADGQTPLY 470 (706)
T ss_dssp --SEEE-------EEECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEECC--------CCCCEEEEEEECTTSSSEEE
T ss_pred --ceEE-------EEECCCCCEEEEEecCCCCCcEEEEEECCCCeEeeccccc-hh-hhcCCCCcEEEEEEcCCCCEEEE
Confidence 1221 4689999999999999999999999999887755555543 32 22335 889999999999 9999
Q ss_pred EEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceee
Q 007620 497 ATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 497 g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~ 568 (595)
+++++|+++++++++ |+||++|+++.. ...+..|........++||++||+|+. ++.+..|
T Consensus 471 ~~~~~P~~~~~~~~~--p~iv~~HGg~~~--------~~~~~~~~~~~~~~~~~la~~G~~v~~-~d~rG~g 531 (706)
T 2z3z_A 471 YKLTMPLHFDPAKKY--PVIVYVYGGPHA--------QLVTKTWRSSVGGWDIYMAQKGYAVFT-VDSRGSA 531 (706)
T ss_dssp EEEECCTTCCTTSCE--EEEEECCCCTTC--------CCCCSCC----CCHHHHHHHTTCEEEE-ECCTTCS
T ss_pred EEEEeCCCCCCCCCc--cEEEEecCCCCc--------eeeccccccCchHHHHHHHhCCcEEEE-EecCCCc
Confidence 999999999877766 999997643210 000011211111246899999999999 6665544
No 4
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.97 E-value=1.3e-26 Score=257.07 Aligned_cols=396 Identities=15% Similarity=0.096 Sum_probs=255.4
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc----cccccceEEe--cCCcE-EEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL----NAVFGSFVWV--NNSTL-LIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~----~~~~~~~~Ws--pdg~~-l~~~ 104 (595)
.+..|+|||| .++|+..+..+ ++...||++ ..+|+.++||....... ...-..+.|+ |||+. |+|.
T Consensus 25 ~~~~~~~s~~--~~~~~~~~~~~----~~~~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 25 RPACVGAVGD--EVWWVAPRPAE----AGRATLVRR-RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp CCEEEEEETT--EEEEEEEETTT----TTEEEEEEE-CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred ccceeEEcCC--eEEEEecCccc----CCcEEEEEE-CCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 5788999955 78998875322 356789998 56788899986543100 0001156687 99999 8886
Q ss_pred ecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC----CCeeecCC-----CC
Q 007620 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD----GTAKDFGT-----PA 175 (595)
Q Consensus 105 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~----g~~~~lt~-----~~ 175 (595)
.. ...+||+++++ ++.++|+. ..
T Consensus 98 ~~------------------------------------------------~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~ 129 (662)
T 3azo_A 98 HF------------------------------------------------GDQRLYAFEPDAPGGAVPRPLTPVSAVGGG 129 (662)
T ss_dssp BT------------------------------------------------TTCCEEEECTTSTTCCCCEECSCCCCSTTC
T ss_pred EC------------------------------------------------CCCeEEEEcCCCCCCCCCEeccCCccCCCC
Confidence 21 02468889987 67888876 22
Q ss_pred -eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC------ceEEEec-cCCCCccCCccccccccCCCCc
Q 007620 176 -VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------KLVRELC-DLPPAEDIPVCYNSVREGMRSI 247 (595)
Q Consensus 176 -~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g------~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 247 (595)
....++|||||++|++++...... .+ .....+|+++|+++ ++.+.+. ... .....+
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~--~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~-------------~~~~~~ 193 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGE--GP-SDVRRFLAAVPLDGSAAADRSAVRELSDDAH-------------RFVTGP 193 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSS--ST-TCEEEEEEEEETTSTTTTCGGGSEESSCSCS-------------SEECCC
T ss_pred ccccCcEECCCCCEEEEEEecccCC--CC-CCceeEEEEEECCCCccccCCceeEEEecCC-------------CcccCc
Confidence 456899999999999997542100 00 01135899999998 7777776 332 112468
Q ss_pred eeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCC-CC---Cceecccc-CccccceeecCCCcEEEEEEeeccc
Q 007620 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GE---KPEILHKL-DLRFRSVSWCDDSLALVNETWYKTS 322 (595)
Q Consensus 248 ~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~-g~---~~~~l~~~-~~~~~~~~wspDg~~l~~~~~~~~~ 322 (595)
.|||||+. |++.........+ ....++++++ + .| +.+.+... ......+.|||||+ +++.... .+
T Consensus 194 ~~SpDG~~-la~~~~~~~~~~~----~~~~i~~~d~---~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~-~~ 263 (662)
T 3azo_A 194 RLSPDGRQ-AVWLAWDHPRMPW----EGTELKTARV---TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDR-TG 263 (662)
T ss_dssp EECTTSSE-EEEEEECTTCCTT----TCEEEEEEEE---CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECT-TS
T ss_pred eECCCCCE-EEEEECCCCCCCC----CCcEEEEEEE---CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECC-CC
Confidence 89999985 6665322111000 1246888886 4 34 45556544 45677899999999 5555432 34
Q ss_pred ceEEEEEeCCCCCCCcEEEeecc--cccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEee
Q 007620 323 QTRTWLVCPGSKDVAPRVLFDRV--FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLF 400 (595)
Q Consensus 323 ~~~L~~~d~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~ 400 (595)
...||++|+++ ++.+.++... +......++...+.++++|+.++... . + ...| +.+
T Consensus 264 ~~~l~~~~~~~--~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~-~-~--~~~l----------------~~~ 321 (662)
T 3azo_A 264 WWNLHRVDPAT--GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG-K-G--AAVL----------------GIL 321 (662)
T ss_dssp SCEEEEECTTT--CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB-S-S--SCEE----------------EEE
T ss_pred CeEEEEEECCC--CceeecccccccccCccccccCceEeEeCCCEEEEEEE-c-C--ccEE----------------EEE
Confidence 55899999977 3455554322 11101111222255566666443332 1 1 2233 356
Q ss_pred ecCCCceeeeeecCccccceeeEEeeeCCCcccc-cccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCCCCCcCC
Q 007620 401 DINTGSKERIWESNREKYFETAVALVFGQGEEDI-NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLAS 479 (595)
Q Consensus 401 d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~~~~~~~ 479 (595)
|+.+++.++|.... ..+. .+ +++++.+++...+...|+++|++++.+++.++|+..+........
T Consensus 322 d~~~~~~~~l~~~~-----~~~~---------~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~ 387 (662)
T 3azo_A 322 DPESGELVDAAGPW-----TEWA---------ATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAY 387 (662)
T ss_dssp ETTTTEEEECCSSC-----CEEE---------EEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGG
T ss_pred ECCCCcEEEecCCC-----CeEE---------EEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccc
Confidence 77667665553221 1111 23 667889999999999999999999989999999987655444444
Q ss_pred C-ceEEEEEECCCCcEEEEEEEcCCCCC----CCCCCCCcEEEEeccCCccCcccCCcccCCCCccc-CCCCchhHHHhc
Q 007620 480 L-QKEMIKYQRKDGVPLTATLYLPPGYD----QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFS-GMTPTSSLIFLA 553 (595)
Q Consensus 480 ~-~~e~v~~~~~DG~~i~g~l~~P~~~~----~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~-~~~~~~~q~la~ 553 (595)
+ .++.+.+++.||.+|+++|++|.+++ +++++ |+||++|+ ++.... ..+....++|++
T Consensus 388 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~--p~vv~~HG--------------~~~~~~~~~~~~~~~~l~~ 451 (662)
T 3azo_A 388 YPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELP--PYVVMAHG--------------GPTSRVPAVLDLDVAYFTS 451 (662)
T ss_dssp SCCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCC--CEEEEECS--------------SSSSCCCCSCCHHHHHHHT
T ss_pred cCcceEEEEEcCCCCEEEEEEECCCCccccCCCCCCc--cEEEEECC--------------CCCccCcccchHHHHHHHh
Confidence 5 79999999999999999999999875 45545 99999764 332111 112245689999
Q ss_pred cCeEEEe
Q 007620 554 RRFAVLA 560 (595)
Q Consensus 554 ~GY~Vl~ 560 (595)
+||+|+.
T Consensus 452 ~G~~v~~ 458 (662)
T 3azo_A 452 RGIGVAD 458 (662)
T ss_dssp TTCEEEE
T ss_pred CCCEEEE
Confidence 9999998
No 5
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.97 E-value=1.2e-27 Score=267.89 Aligned_cols=429 Identities=12% Similarity=0.026 Sum_probs=258.4
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCC--CcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCce---Eeccc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA---KPLFE 79 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~--~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~---~~lt~ 79 (595)
..|++.|+. +|+.++++..... ..+..++|||||++|||.+..... -.......||++|+++|+. ++++
T Consensus 36 ~~i~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~-~~~s~~~~i~~~d~~~g~~~~~~~l~- 109 (719)
T 1z68_A 36 NNIVLYNIE----TGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKL-WRYSYTATYYIYDLSNGEFVRGNELP- 109 (719)
T ss_dssp SCEEEEESS----SCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEEC-SSSCEEEEEEEEETTTTEECCSSCCC-
T ss_pred CCEEEEEcC----CCcEEEEEccccccccceeeEEECCCCCeEEEEecCcee-EEeecceEEEEEECCCCccccceecC-
Confidence 368999998 8888888732111 026789999999999998763100 0001137899999999987 5553
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceE
Q 007620 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (595)
Q Consensus 80 ~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (595)
. .+..+.|||||+.|+|... ..|
T Consensus 110 --~-----~~~~~~~SPDG~~la~~~~--------------------------------------------------~~i 132 (719)
T 1z68_A 110 --R-----PIQYLCWSPVGSKLAYVYQ--------------------------------------------------NNI 132 (719)
T ss_dssp --S-----SBCCEEECSSTTCEEEEET--------------------------------------------------TEE
T ss_pred --c-----ccccceECCCCCEEEEEEC--------------------------------------------------CeE
Confidence 2 4678999999999999621 246
Q ss_pred EEEcC-CCCeeecCCCC--------------------eeeeeEECCCCCeEEEEEcccCccccc----------------
Q 007620 160 VLGSL-DGTAKDFGTPA--------------------VYTAVEPSPDQKYVLITSMHRPYSYKV---------------- 202 (595)
Q Consensus 160 ~~~d~-~g~~~~lt~~~--------------------~~~~~~~SpDg~~l~~~~~~~~~~~~~---------------- 202 (595)
+++++ +|+.++|+... ....++|||||++|++.+.+.......
T Consensus 133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 212 (719)
T 1z68_A 133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINI 212 (719)
T ss_dssp EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEE
T ss_pred EEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceee
Confidence 66666 45555655321 013789999999999987542110000
Q ss_pred cC-----cccceeEEEEcCCCceEE---EeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCC
Q 007620 203 PC-----ARFSQKVQVWTTDGKLVR---ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSP 274 (595)
Q Consensus 203 ~~-----~~~~~~l~~~d~~g~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~ 274 (595)
.+ ......|++||+++++.. .+.. + ..+.+.......+.|+||++ +++. ..+.. ..
T Consensus 213 ~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~SpD~~--~~~~-~~~~~------~~ 276 (719)
T 1z68_A 213 PYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV-P------AMIASSDYYFSWLTWVTDER--VCLQ-WLKRV------QN 276 (719)
T ss_dssp ECCBTTSCCCEEEEEEEESSCHHHHCCEECCC-C------HHHHTSCEEEEEEEESSSSE--EEEE-EEESS------TT
T ss_pred cCCCCCCCCCeeEEEEEECCCCCccceeEccC-C------ccCCCCcceEEEeEEeCCCe--EEEE-Eeccc------cC
Confidence 00 001237899999887642 3211 0 00000001123588999964 4333 11111 11
Q ss_pred cceEEecc----CCCCCCCCceeccc-----cCcccc-----ceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEE
Q 007620 275 RDIIYTQP----AEPAEGEKPEILHK-----LDLRFR-----SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (595)
Q Consensus 275 ~~~~~~~d----~~~~~g~~~~~l~~-----~~~~~~-----~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~ 340 (595)
...++++| + .+++.+.+.. ....+. .+.|||||+.+++......+..+||++|++++ +.+.
T Consensus 277 ~~~l~~~d~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~~ 351 (719)
T 1z68_A 277 VSVLSICDFREDW---QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAIQ 351 (719)
T ss_dssp EEEEEEEEECSSS---SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCEE
T ss_pred eEEEEEEcccCCC---CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC--ceEe
Confidence 23577777 6 4455555552 233333 78999999976664333446679999999884 4566
Q ss_pred Eeecc--cccccCCCCCCCeeeCCCCCEEEEEeee--cCCcccEEEEecCCCCCCCCcceeEeeecCCC--ceeeeeecC
Q 007620 341 LFDRV--FENVYSDPGSPMMTRTSTGTNVIAKIKK--ENDEQIYILLNGRGFTPEGNIPFLDLFDINTG--SKERIWESN 414 (595)
Q Consensus 341 l~~~~--~~~~~~~~~~~~~~~~~dg~~l~~~~~~--~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g--~~~~l~~~~ 414 (595)
|+... +.. +.++ +|+.|++.... .......+| .+++.++ +.++|+...
T Consensus 352 lt~~~~~v~~---------~~~~-d~~~i~~~~~~~~~~~~~~~l~----------------~~~~~~g~~~~~~l~~~~ 405 (719)
T 1z68_A 352 ITSGKWEAIN---------IFRV-TQDSLFYSSNEFEEYPGRRNIY----------------RISIGSYPPSKKCVTCHL 405 (719)
T ss_dssp CSCSSSCEEE---------EEEE-CSSEEEEEESCGGGCTTCBEEE----------------EEECSSSSCCEEESSTTT
T ss_pred cccCceEEEE---------EEEE-eCCEEEEEEecCCCCCceEEEE----------------EEeCCCCCCCceeccCcc
Confidence 65322 222 3344 88888888753 111233444 4555444 234443211
Q ss_pred ccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCC---CCCcCCC-ceEEEEEECC
Q 007620 415 REKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP---YPTLASL-QKEMIKYQRK 490 (595)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~---~~~~~~~-~~e~v~~~~~ 490 (595)
.. ....+. ...|++|++++++..++.+.| .++++++.+++..+++..|.. ..+...+ .+|.+++++.
T Consensus 406 ~~-~~~~~~-------~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (719)
T 1z68_A 406 RK-ERCQYY-------TASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVD 476 (719)
T ss_dssp TT-TTBCBE-------EEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEET
T ss_pred CC-CCCceE-------EEEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecC
Confidence 00 000111 135889999999988888877 588999888887777776532 1233345 8899999998
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhH-HHhccCeEEEeCCCCcee
Q 007620 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSL-IFLARRFAVLAGPSIPII 567 (595)
Q Consensus 491 DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q-~la~~GY~Vl~~~~~~~~ 567 (595)
| .+|++++++|+++++++++ |+||++|++..+ .... ..+.....+ +++++||+|+. ++.+..
T Consensus 477 ~-~~l~~~~~~P~~~~~~~~~--p~vl~~hG~~~~--------~~~~---~~~~~~~~~~l~~~~G~~v~~-~d~rG~ 539 (719)
T 1z68_A 477 E-ITLWYKMILPPQFDRSKKY--PLLIQVYGGPCS--------QSVR---SVFAVNWISYLASKEGMVIAL-VDGRGT 539 (719)
T ss_dssp T-EEEEEEEEECTTCCSSSCE--EEEEEECCCTTB--------CCCC---CCCCCCHHHHHHHTTCCEEEE-EECTTB
T ss_pred C-eEEEEEEEeCCCCCCCCCc--cEEEEECCCCCc--------Cccc---ccchhhHHHHHHhcCCeEEEE-EcCCCC
Confidence 8 9999999999998876655 999998753210 0000 111112334 44579999999 554433
No 6
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=8.4e-28 Score=269.28 Aligned_cols=431 Identities=10% Similarity=-0.009 Sum_probs=256.4
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCC--cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~--~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~ 83 (595)
.|++.|+. +|+.+++....... .+..++|||||++|||........ .......||++|+++|+.++++.....
T Consensus 38 ~i~~~d~~----~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~-~~~~~~~i~~~d~~~~~~~~l~~~~~~ 112 (723)
T 1xfd_A 38 TVRLWNVE----TNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIY-QHSYTGYYVLSKIPHGDPQSLDPPEVS 112 (723)
T ss_dssp CEEEBCGG----GCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCS-SSCCCSEEEEEESSSCCCEECCCTTCC
T ss_pred CEEEEECC----CCcEEEEeccccccccccceEEECCCCCEEEEEecCccce-eecceeeEEEEECCCCceEeccCCccc
Confidence 58899998 77777666322210 277899999999999987532100 001237899999999988888654321
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEc
Q 007620 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 163 (595)
...+..+.|||||+.|+|... ..|++++
T Consensus 113 --~~~~~~~~~SPdG~~la~~~~--------------------------------------------------~~i~~~~ 140 (723)
T 1xfd_A 113 --NAKLQYAGWGPKGQQLIFIFE--------------------------------------------------NNIYYCA 140 (723)
T ss_dssp --SCCCSBCCBCSSTTCEEEEET--------------------------------------------------TEEEEES
T ss_pred --cccccccEECCCCCEEEEEEC--------------------------------------------------CeEEEEE
Confidence 112567999999999999621 2467777
Q ss_pred C-CCCeeecCCCC--------------------eeeeeEECCCCCeEEEEEcccCcccccc----------------C--
Q 007620 164 L-DGTAKDFGTPA--------------------VYTAVEPSPDQKYVLITSMHRPYSYKVP----------------C-- 204 (595)
Q Consensus 164 ~-~g~~~~lt~~~--------------------~~~~~~~SpDg~~l~~~~~~~~~~~~~~----------------~-- 204 (595)
+ +|+.++++... ....++|||||++|++.+.......... .
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 7 44555554321 1146899999999999975431100000 0
Q ss_pred -c--ccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEe
Q 007620 205 -A--RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYT 280 (595)
Q Consensus 205 -~--~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~ 280 (595)
+ .....|++||+.+++. +.+...... .........+.|+|||+. |+... ..+ .....+++
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~-------~~~~~~~~~~~~SpDg~~-l~~~~--~~~------~~~~~i~~ 284 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDP-------RMREYYITMVKWATSTKV-AVTWL--NRA------QNVSILTL 284 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCG-------GGSSEEEEEEEESSSSEE-EEEEE--ETT------SCEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccC-------CCccceeEEEEEeCCCeE-EEEEE--cCC------CCeEEEEE
Confidence 0 0123799999987763 555422100 000011235899999973 43321 111 12246778
Q ss_pred ccCCCCCCCCceecccc--Cccc----cceeecCCCcEEEEEEeeccc----ceEEEEEe-CCCCCCC---cEEEeecc-
Q 007620 281 QPAEPAEGEKPEILHKL--DLRF----RSVSWCDDSLALVNETWYKTS----QTRTWLVC-PGSKDVA---PRVLFDRV- 345 (595)
Q Consensus 281 ~d~~~~~g~~~~~l~~~--~~~~----~~~~wspDg~~l~~~~~~~~~----~~~L~~~d-~~~~~~~---~~~l~~~~- 345 (595)
+|+ .+++...+... .... ..+.|||||+.|++......+ ..+||++| ..+ +. .+.|+...
T Consensus 285 ~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~l~~~~~ 359 (723)
T 1xfd_A 285 CDA---TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPN--SSNDNIQSITSGDW 359 (723)
T ss_dssp EET---TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCC--SSSCCCCBSCCSSS
T ss_pred EeC---CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCC--CCccceeEeecCCe
Confidence 886 54565554322 2222 378999999977664222223 56899999 555 33 45454321
Q ss_pred -cccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCC-ceeeeeecCccccceeeE
Q 007620 346 -FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG-SKERIWESNREKYFETAV 423 (595)
Q Consensus 346 -~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g-~~~~l~~~~~~~~~~~~~ 423 (595)
+.. .+.|++||+.|++...........+| .+++.++ +...|+..... ...+.
T Consensus 360 ~~~~--------~~~~spdg~~l~~~~~~~~~~~~~l~----------------~~~~~~~~~~~~l~~~~~~--~~~~~ 413 (723)
T 1xfd_A 360 DVTK--------ILAYDEKGNKIYFLSTEDLPRRRQLY----------------SANTVGNFNRQCLSCDLVE--NCTYF 413 (723)
T ss_dssp CEEE--------EEEEETTTTEEEEEESSSCTTCCEEE----------------EECSSTTCCCBCSSTTSSS--SCCCC
T ss_pred EEEe--------eeEEcCCCCEEEEEEcCCCCcceEEE----------------EEeCCCCCCcceecccccC--CCCeE
Confidence 211 15899999999887643211123444 4555433 23334321000 00111
Q ss_pred EeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCC---CCCcCCC-ceEEEEEECCCCcEEEEEE
Q 007620 424 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP---YPTLASL-QKEMIKYQRKDGVPLTATL 499 (595)
Q Consensus 424 ~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~---~~~~~~~-~~e~v~~~~~DG~~i~g~l 499 (595)
...||+|++++++..++.+.|..++. +...++...+...+.. ......+ .+|.++|++.|| +|+++|
T Consensus 414 -------~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~ 484 (723)
T 1xfd_A 414 -------SASFSHSMDFFLLKCEGPGVPMVTVH-NTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQI 484 (723)
T ss_dssp -------EEEECTTSSEEEEECCSSSSCCEEEE-ETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBE
T ss_pred -------EEEECCCCCEEEEEccCCCCCeEEEE-ECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEE
Confidence 14689999999999999999986554 6544443333222211 1122334 789999999999 999999
Q ss_pred EcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcc--c-CCCC-chhHHHhccCeEEEeCCCCce
Q 007620 500 YLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF--S-GMTP-TSSLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 500 ~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~--~-~~~~-~~~q~la~~GY~Vl~~~~~~~ 566 (595)
++|+++++++++ |+||++|++ |... . .+.+ +..++|+++||+|+. ++.+.
T Consensus 485 ~~P~~~~~~~~~--p~vv~~HG~--------------~~~~~~~~~~~~~~~~~~l~~~G~~vv~-~d~rG 538 (723)
T 1xfd_A 485 LKPATFTDTTHY--PLLLVVDGT--------------PGSQSVAEKFEVSWETVMVSSHGAVVVK-CDGRG 538 (723)
T ss_dssp EBCSSCCSSSCE--EEEEECCCC--------------TTCCCCCCCCCCSHHHHHHHTTCCEEEC-CCCTT
T ss_pred EeCCCCCCCCcc--CEEEEEcCC--------------CCccccCccccccHHHHHhhcCCEEEEE-ECCCC
Confidence 999998876655 999997643 3210 1 1111 234678889999999 66553
No 7
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.96 E-value=7e-27 Score=255.15 Aligned_cols=359 Identities=14% Similarity=0.055 Sum_probs=240.2
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~ 112 (595)
+....|||||++|||++.+ ++..+||.+ ++|+.+++|..... .+..+.|||| + |+|.....
T Consensus 24 ~~~~~~~~DG~~la~~s~~-------~g~~~lw~~--~~g~~~~lt~~~~~----~~~~~~~spd-~-~l~~~~~~---- 84 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFS-------EGSVNAYLY--DGGETVKLNREPIN----SVLDPHYGVG-R-VILVRDVS---- 84 (582)
T ss_dssp EEEEEEEETTTEEEEEEEE-------TTEEEEEEE--ETTEEEECCSSCCS----EECEECTTCS-E-EEEEEECS----
T ss_pred hheeecCCCCCeEEEEEcc-------CCceeEEEE--cCCCcEeeeccccc----ccccccCCCC-e-EEEEeccC----
Confidence 6678999999999999875 456889986 68899999866521 4568999999 4 56643210
Q ss_pred CCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC--CCCeeecCCCCeeeeeEECCCCCeEE
Q 007620 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL--DGTAKDFGTPAVYTAVEPSPDQKYVL 190 (595)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~--~g~~~~lt~~~~~~~~~~SpDg~~l~ 190 (595)
.| + ...+||.+++ +|...+++........+|||||+.++
T Consensus 85 ----------------~g----------------~-------~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~ 125 (582)
T 3o4h_A 85 ----------------KG----------------A-------EQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVV 125 (582)
T ss_dssp ----------------TT----------------S-------CCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEE
T ss_pred ----------------CC----------------C-------cceEEEEEeccCCCccccccCCCCceeeeeCCCCCeEE
Confidence 01 0 1246888998 77666776554344679999999988
Q ss_pred EEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCccc
Q 007620 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV 270 (595)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~ 270 (595)
+++.... .+.+||+++++.+.+...+. ..+.|+|||+. |++... +.+
T Consensus 126 ~~s~~~~------------~~~l~d~~~g~~~~l~~~~~---------------~~~~~spDG~~-la~~~~-~~~---- 172 (582)
T 3o4h_A 126 FTGATED------------RVALYALDGGGLRELARLPG---------------FGFVSDIRGDL-IAGLGF-FGG---- 172 (582)
T ss_dssp EEEECSS------------CEEEEEEETTEEEEEEEESS---------------CEEEEEEETTE-EEEEEE-EET----
T ss_pred EEecCCC------------CceEEEccCCcEEEeecCCC---------------ceEEECCCCCE-EEEEEE-cCC----
Confidence 8865432 34588999888888765431 35889999985 554422 211
Q ss_pred ccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeec--cccc
Q 007620 271 EVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR--VFEN 348 (595)
Q Consensus 271 ~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~--~~~~ 348 (595)
....++++|+ ++++.+.|+........+.|||||+.|+.. ...+...||++|++++ +.+.+... .+..
T Consensus 173 ---~~~~i~~~d~---~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~--~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~ 242 (582)
T 3o4h_A 173 ---GRVSLFTSNL---SSGGLRVFDSGEGSFSSASISPGMKVTAGL--ETAREARLVTVDPRDG--SVEDLELPSKDFSS 242 (582)
T ss_dssp ---TEEEEEEEET---TTCCCEEECCSSCEEEEEEECTTSCEEEEE--ECSSCEEEEEECTTTC--CEEECCCSCSHHHH
T ss_pred ---CCeEEEEEcC---CCCCceEeecCCCccccceECCCCCEEEEc--cCCCeeEEEEEcCCCC--cEEEccCCCcChhh
Confidence 1235888886 567888887766777899999999987733 2334568999999984 44533222 2222
Q ss_pred ccCCCCCCCee--------eCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccce
Q 007620 349 VYSDPGSPMMT--------RTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 420 (595)
Q Consensus 349 ~~~~~~~~~~~--------~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 420 (595)
+. |+||| .+++.....+ ...+| ++ |+..... ..
T Consensus 243 ---------~~~~~~~~~~~spdg-~~~~~~~~~g--~~~l~------------------~~--g~~~~~~-------~~ 283 (582)
T 3o4h_A 243 ---------YRPTAITWLGYLPDG-RLAVVARREG--RSAVF------------------ID--GERVEAP-------QG 283 (582)
T ss_dssp ---------HCCSEEEEEEECTTS-CEEEEEEETT--EEEEE------------------ET--TEEECCC-------SS
T ss_pred ---------hhhccccceeEcCCC-cEEEEEEcCC--cEEEE------------------EE--CCeeccC-------CC
Confidence 45 99999 5666654422 33444 22 3322210 01
Q ss_pred eeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCCCCCc---CCC-ceEEEEEECCCCcEEE
Q 007620 421 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTL---ASL-QKEMIKYQRKDGVPLT 496 (595)
Q Consensus 421 ~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~~~~~---~~~-~~e~v~~~~~DG~~i~ 496 (595)
.+.. .+|+ |+ .++++.++...|+++|++++.+ +.++| .... ..+ ..|.++|++.||.+|+
T Consensus 284 ~v~~-------~~~s-dg-~~l~~~s~~~~p~~l~~~d~~~-~~~~l------~~~~~~~~~~~~~~~~~~~~~~g~~i~ 347 (582)
T 3o4h_A 284 NHGR-------VVLW-RG-KLVTSHTSLSTPPRIVSLPSGE-PLLEG------GLPEDLRRSIAGSRLVWVESFDGSRVP 347 (582)
T ss_dssp EEEE-------EEEE-TT-EEEEEEEETTEEEEEEEETTCC-EEECC------CCCHHHHHTEEEEEEEEEECTTSCEEE
T ss_pred ceEE-------EEec-CC-EEEEEEcCCCCCCeEEEEcCCC-ceEEE------ecCCccccccCcceEEEEECCCCCEEE
Confidence 1111 3466 54 5668888899999999999765 55555 2222 345 8899999999999999
Q ss_pred EEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcc-cCCCCchhHHHhccCeEEEeCCCCce
Q 007620 497 ATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF-SGMTPTSSLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 497 g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~-~~~~~~~~q~la~~GY~Vl~~~~~~~ 566 (595)
+++++|+++++ +.|+||++|++ +... ...+....+.|+++||+|+. ++.+.
T Consensus 348 ~~~~~p~~~~~----~~p~vv~~HG~--------------~~~~~~~~~~~~~~~l~~~G~~v~~-~d~rG 399 (582)
T 3o4h_A 348 TYVLESGRAPT----PGPTVVLVHGG--------------PFAEDSDSWDTFAASLAAAGFHVVM-PNYRG 399 (582)
T ss_dssp EEEEEETTSCS----SEEEEEEECSS--------------SSCCCCSSCCHHHHHHHHTTCEEEE-ECCTT
T ss_pred EEEEcCCCCCC----CCcEEEEECCC--------------cccccccccCHHHHHHHhCCCEEEE-eccCC
Confidence 99999998764 34999997743 3211 11123456899999999999 55543
No 8
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.95 E-value=8.7e-25 Score=243.54 Aligned_cols=397 Identities=13% Similarity=0.027 Sum_probs=243.8
Q ss_pred eEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc--ccccccceEEecCCcEEEEEecCCCCCCC
Q 007620 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC--LNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (595)
Q Consensus 36 ~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~--~~~~~~~~~Wspdg~~l~~~~~~~~~~~~ 113 (595)
+..+|||++++|++.... .....||+++..+++.++|++..... ....+..+.|||||++|+|....
T Consensus 73 ~~p~~dG~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~------ 141 (695)
T 2bkl_A 73 STPSRRNGRFFYVRTHKD-----KEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP------ 141 (695)
T ss_dssp CCCEEETTEEEEEEECTT-----CSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE------
T ss_pred CCCEEECCEEEEEEEcCC-----CeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC------
Confidence 344599999999987531 23578999999888888887532110 01135689999999999997421
Q ss_pred CccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCee---ecCCCCeeeeeEECCCCCeE
Q 007620 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK---DFGTPAVYTAVEPSPDQKYV 189 (595)
Q Consensus 114 ~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~---~lt~~~~~~~~~~SpDg~~l 189 (595)
.|. ....|+++|+ +|+.. .+... ....++|||||+.|
T Consensus 142 ---------------~G~-----------------------~~~~i~v~dl~tg~~~~~~~~~~~-~~~~~~wspDg~~l 182 (695)
T 2bkl_A 142 ---------------NAA-----------------------DEAVLHVIDVDSGEWSKVDVIEGG-KYATPKWTPDSKGF 182 (695)
T ss_dssp ---------------TTC-----------------------SCCEEEEEETTTCCBCSSCCBSCC-TTCCCEECTTSSEE
T ss_pred ---------------CCC-----------------------ceEEEEEEECCCCCCcCCcccCcc-cccceEEecCCCEE
Confidence 110 1357899999 55544 22221 12578999999999
Q ss_pred EEEEcccCccccccCcccceeEEEEcCCCce--EEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCC
Q 007620 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (595)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (595)
+|++...+............+|+++++.++. .+.+...+... .....+.|+|||+. |++.... .
T Consensus 183 ~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~----------~~~~~~~~SpDG~~-l~~~~~~-~-- 248 (695)
T 2bkl_A 183 YYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP----------TTFLQSDLSRDGKY-LFVYILR-G-- 248 (695)
T ss_dssp EEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT----------TCEEEEEECTTSCC-EEEEEEE-T--
T ss_pred EEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC----------EEEEEEEECCCCCE-EEEEEeC-C--
Confidence 9998643210000001124689999998665 23444332100 01235789999985 5454221 1
Q ss_pred cccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCC-CcEEEeecc-
Q 007620 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFDRV- 345 (595)
Q Consensus 268 ~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~-~~~~l~~~~- 345 (595)
.....+++++. .+++.+.|.........+.| +||. +++..........|+++|+++++. ..+.|+...
T Consensus 249 -----~~~~~l~~~~~---~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 318 (695)
T 2bkl_A 249 -----WSENDVYWKRP---GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS 318 (695)
T ss_dssp -----TTEEEEEEECT---TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS
T ss_pred -----CCceEEEEEcC---CCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC
Confidence 02346777775 44577777654444445556 6777 666543333456899999987420 125554321
Q ss_pred ---cccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceee
Q 007620 346 ---FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 422 (595)
Q Consensus 346 ---~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 422 (595)
+.. +.|+ + ..+++.....+ ...|+ .+++..+..+.+.... ...+
T Consensus 319 ~~~l~~---------~~~~-~-~~lv~~~~~dg--~~~l~----------------~~~~~g~~~~~l~~~~----~~~v 365 (695)
T 2bkl_A 319 SASLLS---------VSIV-G-GHLSLEYLKDA--TSEVR----------------VATLKGKPVRTVQLPG----VGAA 365 (695)
T ss_dssp SCEEEE---------EEEE-T-TEEEEEEEETT--EEEEE----------------EEETTCCEEEECCCSS----SSEE
T ss_pred CCeEEE---------EEEE-C-CEEEEEEEECC--EEEEE----------------EEeCCCCeeEEecCCC----CeEE
Confidence 222 5566 3 44555544321 23343 3455322233331110 0011
Q ss_pred EEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCCCCCcCCCceEEEEEECCCCcEEEEEEEcC
Q 007620 423 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLP 502 (595)
Q Consensus 423 ~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~~~~~~~~~~e~v~~~~~DG~~i~g~l~~P 502 (595)
. ..+++++++.++++.++...|+.+|++|+.+++.+.|+..+.. .+...+.+|.+.+++.||.+|+++|++|
T Consensus 366 ~-------~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~~~~p 437 (695)
T 2bkl_A 366 S-------NLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVP-MNPEQYQVEQVFYASKDGTKVPMFVVHR 437 (695)
T ss_dssp C-------CCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCS-SCGGGEEEEEEEEECTTSCEEEEEEEEE
T ss_pred E-------EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCC-CCHHHCeEEEEEEECCCCCEEEEEEEEC
Confidence 1 2456788899999999999999999999988888888876433 3333348999999999999999999999
Q ss_pred CCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccC-CCCchhHHHhccCeEEEeCCCC
Q 007620 503 PGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG-MTPTSSLIFLARRFAVLAGPSI 564 (595)
Q Consensus 503 ~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~-~~~~~~q~la~~GY~Vl~~~~~ 564 (595)
.++++++++ |+||++|++ +..... .+....+.|+++||+|+. +++
T Consensus 438 ~~~~~~~~~--p~vl~~hGg--------------~~~~~~~~~~~~~~~l~~~G~~v~~-~d~ 483 (695)
T 2bkl_A 438 KDLKRDGNA--PTLLYGYGG--------------FNVNMEANFRSSILPWLDAGGVYAV-ANL 483 (695)
T ss_dssp TTCCCSSCC--CEEEECCCC--------------TTCCCCCCCCGGGHHHHHTTCEEEE-ECC
T ss_pred CCCCCCCCc--cEEEEECCC--------------CccccCCCcCHHHHHHHhCCCEEEE-Eec
Confidence 998765544 999997743 321111 112235789999999999 444
No 9
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.95 E-value=8.7e-25 Score=244.20 Aligned_cols=400 Identities=11% Similarity=0.045 Sum_probs=244.1
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc--cccccceEEecCCcEEEEEecCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL--NAVFGSFVWVNNSTLLIFTIPSSR 109 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~--~~~~~~~~Wspdg~~l~~~~~~~~ 109 (595)
..+.|. |||++++|+..... .....||+++..+++.+.|++...... ...+..+.|||||++|+|....
T Consensus 75 ~~~~p~--~dG~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~-- 145 (710)
T 2xdw_A 75 KYSCHF--KKGKRYFYFYNTGL-----QNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA-- 145 (710)
T ss_dssp EECCCE--EETTEEEEEEECSS-----CSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE--
T ss_pred cCCCCE--EECCEEEEEEEcCC-----ceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC--
Confidence 345554 99999999987521 234589999988888776643321100 0135689999999999997421
Q ss_pred CCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeecCCCC-eeeeeEECCCCC
Q 007620 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPA-VYTAVEPSPDQK 187 (595)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~~~-~~~~~~~SpDg~ 187 (595)
.|. ...+|+++|+ +|+..+++... .+..++|||||+
T Consensus 146 -------------------~G~-----------------------~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~ 183 (710)
T 2xdw_A 146 -------------------SGS-----------------------DWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGK 183 (710)
T ss_dssp -------------------TTC-----------------------SCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSS
T ss_pred -------------------CCC-----------------------ceEEEEEEECCCCCCCcccccCcccceEEEEeCCC
Confidence 110 1247899999 56665543222 235789999999
Q ss_pred eEEEEEcccCcc---ccccCcccceeEEEEcCCCceE--EEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEe
Q 007620 188 YVLITSMHRPYS---YKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (595)
Q Consensus 188 ~l~~~~~~~~~~---~~~~~~~~~~~l~~~d~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~ 262 (595)
.|+|++...+.. ..........+|+++++.++.. +.+...+... .....+.|+|||+. |++...
T Consensus 184 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~----------~~~~~~~~SpDg~~-l~~~~~ 252 (710)
T 2xdw_A 184 GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP----------KWMGGAELSDDGRY-VLLSIR 252 (710)
T ss_dssp EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT----------TCEEEEEECTTSCE-EEEEEE
T ss_pred EEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCC----------eEEEEEEEcCCCCE-EEEEEE
Confidence 999998654310 0000112245799999986542 3333321100 00125789999985 555422
Q ss_pred ecCCCcccccCCcceEEeccCCCCCC------C--CceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 263 QDRGDANVEVSPRDIIYTQPAEPAEG------E--KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 263 ~d~~~~~~~~~~~~~~~~~d~~~~~g------~--~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
. .. .....++++++ .+ + +.+.|....... ...|++||..|++.........+|+++|++++
T Consensus 253 ~-~~------~~~~~l~~~d~---~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 253 E-GC------DPVNRLWYCDL---QQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp C-SS------SSCCEEEEEEG---GGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred c-cC------CCccEEEEEEC---cccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 1 11 11346788786 43 2 345555433222 34599999987776543334568999999874
Q ss_pred CC-CcEEEeecc----cccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCce-e
Q 007620 335 DV-APRVLFDRV----FENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK-E 408 (595)
Q Consensus 335 ~~-~~~~l~~~~----~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~-~ 408 (595)
+. ..+.|+... +.. +.|+++ ..+++.....+ ...|+ .+++.+|+. +
T Consensus 322 ~~~~~~~l~~~~~~~~~~~---------~~~~~~-~~lv~~~~~~g--~~~l~----------------~~~~~~g~~~~ 373 (710)
T 2xdw_A 322 EESKWKVLVPEHEKDVLEW---------VACVRS-NFLVLCYLHDV--KNTLQ----------------LHDLATGALLK 373 (710)
T ss_dssp CGGGCEEEECCCSSCEEEE---------EEEETT-TEEEEEEEETT--EEEEE----------------EEETTTCCEEE
T ss_pred CcccceeccCCCCCCeEEE---------EEEEcC-CEEEEEEEECC--EEEEE----------------EEECCCCCEEE
Confidence 21 225554321 222 677744 45555554321 22343 456655653 3
Q ss_pred eeeecCccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCc--eeeEecCCCCCCCcCCCceEEEE
Q 007620 409 RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK--SSQITNFPHPYPTLASLQKEMIK 486 (595)
Q Consensus 409 ~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~--~~~Lt~~~~~~~~~~~~~~e~v~ 486 (595)
.|... ...+.. .+++++++.++++.++...|+.+|++|+.+++ .+.|........+...+.+|.++
T Consensus 374 ~l~~~-----~~~v~~-------~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~ 441 (710)
T 2xdw_A 374 IFPLE-----VGSVVG-------YSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIF 441 (710)
T ss_dssp EECCC-----SSEEEE-------EECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEE
T ss_pred ecCCC-----CceEEE-------EecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEE
Confidence 33211 011111 34677888999999999999999999998887 66676653222333334889999
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCC-chhHHHhc-cCeEEEe
Q 007620 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLA-RRFAVLA 560 (595)
Q Consensus 487 ~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~-~~~q~la~-~GY~Vl~ 560 (595)
|++.||.+|+++|++|.++++++++ |+||++|+ ++.......+ ...+.|++ +||+|+.
T Consensus 442 ~~~~dg~~i~~~~~~p~~~~~~~~~--P~vl~~hG--------------g~~~~~~~~~~~~~~~l~~~~G~~v~~ 501 (710)
T 2xdw_A 442 YPSKDGTKIPMFIVHKKGIKLDGSH--PAFLYGYG--------------GFNISITPNYSVSRLIFVRHMGGVLAV 501 (710)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCS--CEEEECCC--------------CTTCCCCCCCCHHHHHHHHHHCCEEEE
T ss_pred EEcCCCCEEEEEEEecCCCCCCCCc--cEEEEEcC--------------CCCCcCCCcccHHHHHHHHhCCcEEEE
Confidence 9999999999999999998665544 99999774 3321111112 23467888 9999999
No 10
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.94 E-value=1.3e-23 Score=233.66 Aligned_cols=349 Identities=13% Similarity=0.071 Sum_probs=217.2
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
....++|||||++|||...... .....|+++|+++|+..+.+. .. .....+.|+ ||+.|+|........
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G-----~~~~~i~v~dl~tg~~~~~~~-~~----~k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAG-----SDWREIHLMDVESKQPLETPL-KD----VKFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSS-----CCEEEEEEEETTTCSEEEEEE-EE----EESCCCEEE-TTTEEEEEESSCCC-
T ss_pred EEEEEEECCCCCEEEEEEecCC-----CceEEEEEEECCCCCCCcccc-CC----ceeccEEEe-CCCEEEEEEecCccc
Confidence 3567899999999999887531 234789999999999766532 11 024689999 999999975431100
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CC--CeeecCCC-C----eeeeeEEC
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--TAKDFGTP-A----VYTAVEPS 183 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g--~~~~lt~~-~----~~~~~~~S 183 (595)
+. ..+ .....+||+.++ ++ +.+.|... . ....+.||
T Consensus 199 ------------------~~------~~~------------~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~S 242 (693)
T 3iuj_A 199 ------------------SE------LSA------------RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVT 242 (693)
T ss_dssp ------------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEEC
T ss_pred ------------------cc------ccc------------cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEc
Confidence 00 000 002457888888 43 23444322 2 34578999
Q ss_pred CCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEee
Q 007620 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (595)
Q Consensus 184 pDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~ 263 (595)
|||++|+++...... ..+++++|++++.
T Consensus 243 pDg~~l~~~~~~~~~---------~~~i~~~d~~~~~------------------------------------------- 270 (693)
T 3iuj_A 243 EDDRFLLISAANSTS---------GNRLYVKDLSQEN------------------------------------------- 270 (693)
T ss_dssp TTSCEEEEEEESSSS---------CCEEEEEETTSTT-------------------------------------------
T ss_pred CCCCEEEEEEccCCC---------CcEEEEEECCCCC-------------------------------------------
Confidence 999999998653211 1245555543221
Q ss_pred cCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCC-CcEEEe
Q 007620 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLF 342 (595)
Q Consensus 264 d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~-~~~~l~ 342 (595)
++.+.|.........+ |+++|..|++..+.+..+.+|+.+|+++++. ..+.++
T Consensus 271 -------------------------~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~ 324 (693)
T 3iuj_A 271 -------------------------APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI 324 (693)
T ss_dssp -------------------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred -------------------------CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe
Confidence 0122222111111112 6777777666554333456999999988421 124454
Q ss_pred ecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceee
Q 007620 343 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 422 (595)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 422 (595)
..... . +.|+++|+.|++...+.+ ...|+ .++++++..+.|.... ...+
T Consensus 325 ~~~~~--------~-~~~s~~g~~lv~~~~~~g--~~~l~----------------~~d~~g~~~~~l~~p~----~~~~ 373 (693)
T 3iuj_A 325 PERQQ--------V-LTVHSGSGYLFAEYMVDA--TARVE----------------QFDYEGKRVREVALPG----LGSV 373 (693)
T ss_dssp CCCSS--------C-EEEEEETTEEEEEEEETT--EEEEE----------------EECTTSCEEEEECCSS----SSEE
T ss_pred cCCCC--------E-EEEEEECCEEEEEEEECC--eeEEE----------------EEECCCCeeEEeecCC----CceE
Confidence 32211 1 378889998888765432 22333 4566544444442111 0111
Q ss_pred EEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCCCCCcCCCceEEEEEECCCCcEEEEEEEcC
Q 007620 423 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLP 502 (595)
Q Consensus 423 ~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~~~~~~~~~~e~v~~~~~DG~~i~g~l~~P 502 (595)
.. .+++++++.+++..++...|+.+|.+|+.+++.+.|+..+.. .....+.+|.+++++.||.+|+++|++|
T Consensus 374 ~~-------~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~dg~~i~~~l~~p 445 (693)
T 3iuj_A 374 SG-------FNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAAP-FKPEDYVSEQRFYQSKDGTRVPLIISYR 445 (693)
T ss_dssp EE-------CCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCSS-CCGGGEEEEEEEEECTTSCEEEEEEEEE
T ss_pred Ee-------eecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCC-cChhhCeeEEEEEecCCCcEEEEEEEec
Confidence 11 345678889999999999999999999988888888877533 3333348999999999999999999999
Q ss_pred CCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCC-CchhHHHhccCeEEEe
Q 007620 503 PGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT-PTSSLIFLARRFAVLA 560 (595)
Q Consensus 503 ~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~-~~~~q~la~~GY~Vl~ 560 (595)
.++++++ +.|+||++|++ +....... ....+.|+++||+|+.
T Consensus 446 ~~~~~~~--~~P~ll~~hGg--------------~~~~~~~~~~~~~~~l~~~G~~v~~ 488 (693)
T 3iuj_A 446 KGLKLDG--SNPTILYGYGG--------------FDVSLTPSFSVSVANWLDLGGVYAV 488 (693)
T ss_dssp SSCCCSS--CCCEEEECCCC--------------TTCCCCCCCCHHHHHHHHTTCEEEE
T ss_pred CCCCCCC--CccEEEEECCC--------------CCcCCCCccCHHHHHHHHCCCEEEE
Confidence 9887654 44999997743 22111111 2235799999999999
No 11
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.93 E-value=3.7e-23 Score=232.00 Aligned_cols=396 Identities=11% Similarity=0.039 Sum_probs=235.7
Q ss_pred EEccCCCEEEEEEecccccccCCCceEEEEEECC---CCceEecccCCCccc--cccccceEEecCCcEEEEEecCCCCC
Q 007620 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE---TGEAKPLFESPDICL--NAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 37 ~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~---~g~~~~lt~~~~~~~--~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
..+|||++++|++.... .....||+++.. +++.++|++...... ...+..+.|||||++|+|....
T Consensus 113 ~p~pdG~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~---- 183 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSGL-----MNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQD---- 183 (741)
T ss_dssp CCEEETTEEEEEEECSS-----CSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEE----
T ss_pred CCEEECCEEEEEEEcCC-----CeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcC----
Confidence 34599999999987531 225789999987 777777643321100 0135689999999999997421
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeecCCCC-eeeeeEECCCCCeE
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPA-VYTAVEPSPDQKYV 189 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~~~-~~~~~~~SpDg~~l 189 (595)
.|. ...+|+++|+ +|+........ .+..++|||| +.|
T Consensus 184 -----------------~G~-----------------------e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l 222 (741)
T 1yr2_A 184 -----------------GGS-----------------------DWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DAL 222 (741)
T ss_dssp -----------------TTC-----------------------SEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEE
T ss_pred -----------------CCC-----------------------ceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEE
Confidence 110 1247999999 56655442222 2247899999 999
Q ss_pred EEEEcccCcc-ccccCcccceeEEEEcCCCce--EEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCC
Q 007620 190 LITSMHRPYS-YKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (595)
Q Consensus 190 ~~~~~~~~~~-~~~~~~~~~~~l~~~d~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (595)
+|++...+.. ..........+|+++++.++. .+.+...+... .....+.|||||+. |++... +..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~----------~~~~~~~~SpDG~~-l~~~~~-~~~ 290 (741)
T 1yr2_A 223 LYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELP----------KRGHGASVSSDGRW-VVITSS-EGT 290 (741)
T ss_dssp EEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCT----------TCEEEEEECTTSCE-EEEEEE-CTT
T ss_pred EEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCC----------eEEEEEEECCCCCE-EEEEEE-ccC
Confidence 9998654310 000001124579999987654 23343322100 01235789999985 544422 110
Q ss_pred CcccccCCcceEEeccCCCCCCC--C-ceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEee
Q 007620 267 DANVEVSPRDIIYTQPAEPAEGE--K-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 343 (595)
Q Consensus 267 ~~~~~~~~~~~~~~~d~~~~~g~--~-~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~ 343 (595)
.....++++++ +++ + .+.|.........+ |+|||..|++.......+.+|+++|+++++.+.+.++.
T Consensus 291 ------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 291 ------DPVNTVHVARV---TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp ------CSCCEEEEEEE---ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC
T ss_pred ------CCcceEEEEEC---CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec
Confidence 12347888886 544 4 56665433222233 56899887776543334678999999873102344442
Q ss_pred cccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceeeE
Q 007620 344 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 423 (595)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 423 (595)
.... .+. .+.|+ +..+++.....+ ...|+ .++++++..+.|.... ...+.
T Consensus 361 ~~~~-~l~-----~~~~~--~~~lv~~~~~dg--~~~l~----------------~~~~~g~~~~~l~~~~----~~~v~ 410 (741)
T 1yr2_A 361 ESKD-NLE-----SVGIA--GNRLFASYIHDA--KSQVL----------------AFDLDGKPAGAVSLPG----IGSAS 410 (741)
T ss_dssp CCSS-EEE-----EEEEE--BTEEEEEEEETT--EEEEE----------------EEETTSCEEEECBCSS----SCEEE
T ss_pred CCCC-eEE-----EEEEE--CCEEEEEEEECC--EEEEE----------------EEeCCCCceeeccCCC----CeEEE
Confidence 2111 000 04454 445666654322 22343 3555333333332110 01111
Q ss_pred EeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCCCCCcCCCceEEEEEECCCCcEEEEEEEcCC
Q 007620 424 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPP 503 (595)
Q Consensus 424 ~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~~~~~~~~~~e~v~~~~~DG~~i~g~l~~P~ 503 (595)
. .+++++++.++++.++...|+.+|++|+.+++.+.|+.. ....+...+.+|.+.|++.||.+|+++|++|.
T Consensus 411 ~-------~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~-~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~p~ 482 (741)
T 1yr2_A 411 G-------LSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPV-HLTFDPADFRVEQVFYPSKDGTKVPMFIVRRK 482 (741)
T ss_dssp E-------EECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCC-CCSSCGGGEEEEEEEEECTTSCEEEEEEEEET
T ss_pred E-------eecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecC-CCCCChhHCEEEEEEEEcCCCCEEEEEEEecC
Confidence 1 346788889999999999999999999988886666653 22223333489999999999999999999999
Q ss_pred CCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccC-CCCchhHHHhccCeEEEe
Q 007620 504 GYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG-MTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 504 ~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~-~~~~~~q~la~~GY~Vl~ 560 (595)
++ . +++ |+||++|++ +..... .+....+.|+++||+|+.
T Consensus 483 ~~-~-~~~--p~vl~~hGg--------------~~~~~~~~~~~~~~~l~~~G~~v~~ 522 (741)
T 1yr2_A 483 DA-K-GPL--PTLLYGYGG--------------FNVALTPWFSAGFMTWIDSGGAFAL 522 (741)
T ss_dssp TC-C-SCC--CEEEECCCC--------------TTCCCCCCCCHHHHHHHTTTCEEEE
T ss_pred CC-C-CCC--cEEEEECCC--------------CCccCCCCcCHHHHHHHHCCcEEEE
Confidence 86 2 334 999997743 321111 112345789999999999
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.93 E-value=1.6e-22 Score=226.39 Aligned_cols=342 Identities=13% Similarity=0.087 Sum_probs=205.2
Q ss_pred cccceEEc-cCCCEEEEEEecccccccCCCceEEEEEECCCC-ceEecccCCCccccccccceEEecCCcEEEEEecCCC
Q 007620 32 KINFVSWS-PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (595)
Q Consensus 32 ~~~~~~~S-PDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g-~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~ 109 (595)
....++|| |||++|||+..... ....+||++|+++| +. ++..-. ...+.+.|||||+.|+|+..+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G-----~~~~~l~v~dl~~g~~~--l~~~~~----~~~~~~~WspDg~~l~y~~~d~- 242 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSG-----NEVYTIEFKRISDPSQT--IADKVS----GTNGEIVWGPDHTSLFYVTKDE- 242 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSS-----SSCEEEEEEETTCTTCC--CCCCEE----EECSCCEECSSTTEEEEEEECT-
T ss_pred EEeeeEecCCCCCEEEEEEeCCC-----CceEEEEEEECCCCCEe--CCcccc----CceeeEEEecCCCEEEEEEECC-
Confidence 35679999 99999999987531 23467999999998 62 221101 1246899999999999974210
Q ss_pred CCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC-CC--eeec---CCCCeeeeeEEC
Q 007620 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GT--AKDF---GTPAVYTAVEPS 183 (595)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~--~~~l---t~~~~~~~~~~S 183 (595)
.+ ...+||++++. ++ .+.+ ....+...+.||
T Consensus 243 -------------------~~------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~S 279 (751)
T 2xe4_A 243 -------------------TL------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKA 279 (751)
T ss_dssp -------------------TC------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEEC
T ss_pred -------------------CC------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEEC
Confidence 00 12478888883 33 2333 223455678999
Q ss_pred CCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEee
Q 007620 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (595)
Q Consensus 184 pDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~ 263 (595)
|||++|+++..... ..+|+++|++++.
T Consensus 280 pDg~~l~~~~~~~~----------~~~l~~~d~~~~~------------------------------------------- 306 (751)
T 2xe4_A 280 ADTNTLCIGSQSPE----------TAEVHLLDLRKGN------------------------------------------- 306 (751)
T ss_dssp TTSSEEEEEEECSS----------CEEEEEEESSSCT-------------------------------------------
T ss_pred CCCCEEEEEecCCC----------CceEEEEECCCCC-------------------------------------------
Confidence 99999999874321 2355555554321
Q ss_pred cCCCcccccCCcceEEeccCCCCCCCCc--eeccccCccccceeecCC---CcEEEEEEeec-ccceEEEEEeCCCCCCC
Q 007620 264 DRGDANVEVSPRDIIYTQPAEPAEGEKP--EILHKLDLRFRSVSWCDD---SLALVNETWYK-TSQTRTWLVCPGSKDVA 337 (595)
Q Consensus 264 d~~~~~~~~~~~~~~~~~d~~~~~g~~~--~~l~~~~~~~~~~~wspD---g~~l~~~~~~~-~~~~~L~~~d~~~~~~~ 337 (595)
++. +.+.... ..+.|+++ |..|++....+ ..+.+|+.+|+++. ++
T Consensus 307 -------------------------~~~~~~~l~~~~---~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~-~~ 357 (751)
T 2xe4_A 307 -------------------------AHNTLEIVRPRE---KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP-SD 357 (751)
T ss_dssp -------------------------TCCCEEESSCCC---TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTST-TC
T ss_pred -------------------------CCceeEEeecCC---CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc-cc
Confidence 011 1111110 11223333 55555544332 35568999998752 12
Q ss_pred cEE-EeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeec-------CCCc-ee
Q 007620 338 PRV-LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI-------NTGS-KE 408 (595)
Q Consensus 338 ~~~-l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~-------~~g~-~~ 408 (595)
.+. ++.......+ ..++.+++.|++.....+ ...++ .+++ .+++ .+
T Consensus 358 ~~~~li~~~~~~~l-------~~~~~~~~~lv~~~~~~g--~~~l~----------------~~dl~~~~~~~~~g~~~~ 412 (751)
T 2xe4_A 358 WSHVLVDHSEDVFM-------ESIAVRSNYLVVAGRRAG--LTRIW----------------TMMADSQDGVFKAGTGLR 412 (751)
T ss_dssp CCCEEECCCSSEEE-------EEEEECSSEEEEEEEETT--EEEEE----------------EEECCTTTSCCCTTTCCE
T ss_pred ceeeEECCCCCcEE-------EEEEEECCEEEEEEEeCC--EEEEE----------------EEecccccccccCCccce
Confidence 233 3321110000 223344667777765432 23343 3453 3444 44
Q ss_pred eeeecCccccceeeEEeeeCCCcccc--cccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCC-CCCcCCCceEEE
Q 007620 409 RIWESNREKYFETAVALVFGQGEEDI--NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP-YPTLASLQKEMI 485 (595)
Q Consensus 409 ~l~~~~~~~~~~~~~~~~~~~~~~~~--s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~-~~~~~~~~~e~v 485 (595)
.|.-... .....+. ... +.+++.++++.++...|+++|.+++.+++.+.|+..+.+ ..+...+.+|.+
T Consensus 413 ~l~l~~~----~~~~~~~-----~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 483 (751)
T 2xe4_A 413 EVVMEEP----IFTVHLV-----ESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGFDAANYKVERR 483 (751)
T ss_dssp ECCCCCS----SCEEEEC-----GGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCTTCCGGGEEEEEE
T ss_pred EECCCCc----eeEEEec-----cCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccccCCCccceEEEEE
Confidence 4421110 0011110 011 457788999999999999999999988888889876432 233333478999
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCccc-CCCCchhHHHhccCeEEEe
Q 007620 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFS-GMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 486 ~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~-~~~~~~~q~la~~GY~Vl~ 560 (595)
+|++.||.+|+++|++|+++++++++ |+||++|++ +.... ..+....+.||++||+|+.
T Consensus 484 ~~~s~dG~~i~~~l~~p~~~~~~~~~--P~vl~~HGg--------------~~~~~~~~~~~~~~~l~~~G~~v~~ 543 (751)
T 2xe4_A 484 FATAPDQTKIPLSVVYHKDLDMSQPQ--PCMLYGYGS--------------YGLSMDPQFSIQHLPYCDRGMIFAI 543 (751)
T ss_dssp EEECTTCCEEEEEEEEETTSCTTSCC--CEEEECCCC--------------TTCCCCCCCCGGGHHHHTTTCEEEE
T ss_pred EEECCCCcEEEEEEEcCCCCCCCCCc--cEEEEECCC--------------CCcCCCCcchHHHHHHHhCCcEEEE
Confidence 99999999999999999998765545 999997743 32111 1112345899999999999
No 13
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=1.6e-20 Score=193.45 Aligned_cols=351 Identities=11% Similarity=0.069 Sum_probs=205.2
Q ss_pred eeEEEecCCCCCCCCceeeecCCCC---CcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDG---AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~---~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~ 82 (595)
.+|+.... ++..+++|..... ..+.+|+|||||++|||.+.+ ++..+||++++++|+.+++|....
T Consensus 12 ~~~~~~~~----g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~-------~g~~~l~~~d~~~g~~~~lt~~~~ 80 (388)
T 3pe7_A 12 DTYQDAST----GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF-------DGPWNYYLLDLNTQVATQLTEGRG 80 (388)
T ss_dssp EEEECTTT----CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT-------TSSCEEEEEETTTCEEEECCCSSC
T ss_pred eEEecCCC----CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcC-------CCCceEEEEeCCCCceEEeeeCCC
Confidence 45654332 6678888854322 122349999999999999864 346799999999999999986553
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEE
Q 007620 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (595)
Q Consensus 83 ~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (595)
. ....+.|||||+.|+|... ...|+++
T Consensus 81 ~----~~~~~~~spdg~~l~~~~~-------------------------------------------------~~~l~~~ 107 (388)
T 3pe7_A 81 D----NTFGGFLSPDDDALFYVKD-------------------------------------------------GRNLMRV 107 (388)
T ss_dssp B----CSSSCEECTTSSEEEEEET-------------------------------------------------TTEEEEE
T ss_pred C----CccceEEcCCCCEEEEEeC-------------------------------------------------CCeEEEE
Confidence 1 1226799999999999631 1357788
Q ss_pred cC-CCCeeecCC-C-Ceee--eeEECCCCCeEEEEEcccCccccc-c--------CcccceeEEEEcCCCceEEEeccCC
Q 007620 163 SL-DGTAKDFGT-P-AVYT--AVEPSPDQKYVLITSMHRPYSYKV-P--------CARFSQKVQVWTTDGKLVRELCDLP 228 (595)
Q Consensus 163 d~-~g~~~~lt~-~-~~~~--~~~~SpDg~~l~~~~~~~~~~~~~-~--------~~~~~~~l~~~d~~g~~~~~l~~~~ 228 (595)
|+ +|+.+.+.. + .... ...++|||+.|+............ . .......|+++|+.+++.+.+...+
T Consensus 108 d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 187 (388)
T 3pe7_A 108 DLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN 187 (388)
T ss_dssp ETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES
T ss_pred ECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC
Confidence 88 556655532 2 2222 334599999988664322100000 0 0012368999999988887775432
Q ss_pred CCccCCccccccccCCCCceeec-CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccC--cccccee
Q 007620 229 PAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFRSVS 305 (595)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wsp-dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~--~~~~~~~ 305 (595)
. ....+.|+| ||+. |++... +..+ .....+++++. ++++.+.+.... .....+.
T Consensus 188 ~-------------~~~~~~~sp~dg~~-l~~~~~-~~~~-----~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~ 244 (388)
T 3pe7_A 188 Q-------------WLGHPIYRPYDDST-VAFCHE-GPHD-----LVDARMWLINE---DGTNMRKVKTHAEGESCTHEF 244 (388)
T ss_dssp S-------------CEEEEEEETTEEEE-EEEEEC-SCTT-----TSSCSEEEEET---TSCCCEESCCCCTTEEEEEEE
T ss_pred c-------------cccccEECCCCCCE-EEEEEe-cCCC-----CCcceEEEEeC---CCCceEEeeeCCCCcccccce
Confidence 1 123578999 9874 656532 1110 11346787786 566777776544 2356789
Q ss_pred ecCCCcEEEEEEeecc-cceEEEEEeCCCCCCCcEEEeeccc-ccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEE
Q 007620 306 WCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVF-ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 383 (595)
Q Consensus 306 wspDg~~l~~~~~~~~-~~~~L~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~ 383 (595)
|||||+.|++...... ....||++|++++ +.+.+..... ......+. ...|+|||+.|++...+.+ .+
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~--~~~~spdg~~l~~~~~~~~-----~~- 314 (388)
T 3pe7_A 245 WVPDGSALVYVSYLKGSPDRFIYSADPETL--ENRQLTSMPACSHLMSNYD--GSLMVGDGSDAPVDVQDDS-----GY- 314 (388)
T ss_dssp ECTTSSCEEEEEEETTCCCEEEEEECTTTC--CEEEEEEECCEEEEEECTT--SSEEEEEECCC----------------
T ss_pred ECCCCCEEEEEecCCCCCcceEEEEecCCC--ceEEEEcCCCceeeeecCC--CCeEccCCCcceeEeeecc-----cc-
Confidence 9999998777653322 2235999999984 4555543211 00000111 1479999998887653210 00
Q ss_pred ecCCCCCCCCcceeEeeecCCCceeeeeecCccccceeeEEeee-CCCcccccccCCEEEEEEecCCCcceEEEEeCCCC
Q 007620 384 NGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF-GQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (595)
Q Consensus 384 ~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~ 462 (595)
.......|+.+|+.+++.++|+..... +.....-.. ......||+||++|++..... ..+.||++++..+
T Consensus 315 ------~~~~~~~i~~~d~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~-g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 315 ------KIENDPFLYVFNMKNGTQHRVARHDTS--WKVFEGDRQVTHPHPSFTPDDKQILFTSDVH-GKPALYLATLPES 385 (388)
T ss_dssp --------CCCCEEEEEETTTTEEEEEEECCCC--CCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCGG
T ss_pred ------ccCCCCEEEEEeccCCceEEeccccCc--ccccccccccCCCCccCCCCCCEEEEEecCC-CceeEEEEECChh
Confidence 001112344678888887777644320 000000000 001247899999999887554 4566999998654
No 14
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=7e-18 Score=196.36 Aligned_cols=368 Identities=14% Similarity=0.087 Sum_probs=220.8
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.+||+.++. +|++++|+... ..+..++|||||++|||++....+ .+..+||++++++|+.++|+....
T Consensus 33 ~~l~~~~~~----gg~~~~lt~~~--~~v~~~~~SPDG~~la~~s~~~~~----~~~~~i~~~d~~~g~~~~lt~~~~-- 100 (1045)
T 1k32_A 33 DDLWEHDLK----SGSTRKIVSNL--GVINNARFFPDGRKIAIRVMRGSS----LNTADLYFYNGENGEIKRITYFSG-- 100 (1045)
T ss_dssp TEEEEEETT----TCCEEEEECSS--SEEEEEEECTTSSEEEEEEEESTT----CCEEEEEEEETTTTEEEECCCCCE--
T ss_pred CcEEEEECC----CCcEEEeeeCC--CcccCeEECCCCCEEEEEEeeccC----CCCCeEEEEECCCCCeEEcccCCC--
Confidence 379999998 89999999543 358999999999999999865211 245799999999999999986553
Q ss_pred ccccc-------cceEEecCCcEEEEEecCCC---C--CCC-------CccccCCCCe---------eeecC--------
Q 007620 85 LNAVF-------GSFVWVNNSTLLIFTIPSSR---R--DPP-------KKTMVPLGPK---------IQSNE-------- 128 (595)
Q Consensus 85 ~~~~~-------~~~~Wspdg~~l~~~~~~~~---~--~~~-------~~~~~~~g~~---------~~~~~-------- 128 (595)
.+ ..+.|||||+ |+|...... . .+. ....+..++. +....
T Consensus 101 ---~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~ 176 (1045)
T 1k32_A 101 ---KSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHW 176 (1045)
T ss_dssp ---EEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTS
T ss_pred ---cccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCcccc
Confidence 34 6899999999 666543210 0 000 0000111100 00000
Q ss_pred ---ccccccccccccc-------c-cCc-------CCccceEEe----ecceEEEEcCCC-CeeecCCCCeeeeeEECCC
Q 007620 129 ---QKNIIISRMTDNL-------L-KDE-------YDESLFDYY----TTAQLVLGSLDG-TAKDFGTPAVYTAVEPSPD 185 (595)
Q Consensus 129 ---~g~~~~~~~~~~~-------~-~~~-------~~~~~~~~~----~~~~l~~~d~~g-~~~~lt~~~~~~~~~~SpD 185 (595)
.+.. ....+... + ... +....+.+. ...+||.+++++ ..++|+.......++||||
T Consensus 177 ~~~~g~~-~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpD 255 (1045)
T 1k32_A 177 KGYRGGT-RGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTD 255 (1045)
T ss_dssp TTCCSTT-CCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEES
T ss_pred ccccCCC-cCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCC
Confidence 0000 00000000 0 000 000111111 235788888855 6777765543446799999
Q ss_pred CCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceee-cCCCeeEEEEEeec
Q 007620 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWR-ADKPSTLYWVEAQD 264 (595)
Q Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ws-pdg~~~l~~~~~~d 264 (595)
|++|++... ..|++||++++....+...... ..+. ..........+.|+ |||+. |++..
T Consensus 256 G~~la~~~~--------------~~i~~~d~~~~~l~~l~~~~~~-~~~~-~~~~~~~v~~~~~S~pdG~~-la~~~--- 315 (1045)
T 1k32_A 256 GRRILFSKG--------------GSIYIFNPDTEKIEKIEIGDLE-SPED-RIISIPSKFAEDFSPLDGDL-IAFVS--- 315 (1045)
T ss_dssp SSCEEEEET--------------TEEEEECTTTCCEEECCCCCCC-BCCS-EEEECGGGGEEEEEECGGGC-EEEEE---
T ss_pred CCEEEEEeC--------------CEEEEecCCceEeeeeccCccc-cccc-ccccccccceeeecCCCCCE-EEEEE---
Confidence 999999842 3789999876655544321100 0000 00000123468999 99985 55541
Q ss_pred CCCcccccCCcceEEeccCCCCCCCCceeccccCc-cccceeecCCCcEEEEEEeecccceEEE-EEeCCCCCCCcEEEe
Q 007620 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTW-LVCPGSKDVAPRVLF 342 (595)
Q Consensus 265 ~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~L~-~~d~~~~~~~~~~l~ 342 (595)
+..+++++. .+++...+..... ....+.|+ ||..+++... ..+|| ++++++ ++.+.+.
T Consensus 316 ----------~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~----~~~l~~~~d~~~--~~~~~l~ 375 (1045)
T 1k32_A 316 ----------RGQAFIQDV---SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR----EGDFLGIYDYRT--GKAEKFE 375 (1045)
T ss_dssp ----------TTEEEEECT---TSSBEEECSCCSCEEEEEECSS-SEEEEEEEET----TEEEEEEEETTT--CCEEECC
T ss_pred ----------cCEEEEEcC---CCCceEEccCCCcceEEeeeEc-CCCeEEEEEC----CCceEEEEECCC--CCceEec
Confidence 245777775 4456666655554 67789999 9988877652 34899 999987 3445554
Q ss_pred ec--ccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccce
Q 007620 343 DR--VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 420 (595)
Q Consensus 343 ~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 420 (595)
.. .+.. +.|+|||+.|++... ...++ .+|+++++...+......
T Consensus 376 ~~~~~~~~---------~~~SpDG~~la~~~~-----~~~v~----------------~~d~~tg~~~~~~~~~~~---- 421 (1045)
T 1k32_A 376 ENLGNVFA---------MGVDRNGKFAVVAND-----RFEIM----------------TVDLETGKPTVIERSREA---- 421 (1045)
T ss_dssp CCCCSEEE---------EEECTTSSEEEEEET-----TSEEE----------------EEETTTCCEEEEEECSSS----
T ss_pred CCccceee---------eEECCCCCEEEEECC-----CCeEE----------------EEECCCCceEEeccCCCC----
Confidence 22 1222 899999999987653 12333 468888887766533211
Q ss_pred eeEEeeeCCCcccccccCCEEEEEEecC------CCcceEEEEeCCCCceeeEecC
Q 007620 421 TAVALVFGQGEEDINLNQLKILTSKESK------TEITQYHILSWPLKKSSQITNF 470 (595)
Q Consensus 421 ~~~~~~~~~~~~~~s~d~~~l~~~~~s~------~~p~~l~~~d~~~~~~~~Lt~~ 470 (595)
.+. ...|||||+++++..... ..+..+++.|+.+++.++|+..
T Consensus 422 ~v~-------~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~ 470 (1045)
T 1k32_A 422 MIT-------DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 470 (1045)
T ss_dssp CCC-------CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS
T ss_pred Ccc-------ceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCC
Confidence 111 246899999998877543 4567899999988877677654
No 15
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.82 E-value=3.2e-17 Score=183.85 Aligned_cols=324 Identities=14% Similarity=0.167 Sum_probs=194.8
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc------------------c--ccccc
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL------------------N--AVFGS 91 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~------------------~--~~~~~ 91 (595)
.+..++|||||++|||.+..+.. .....||++++++|+.++++....... . ..+..
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~----~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSD----RNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSC----TTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCceEecCCCEEEEEeccCCC----CcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 47789999999999998863110 124689999999999888865432100 0 12568
Q ss_pred eEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CC---C
Q 007620 92 FVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG---T 167 (595)
Q Consensus 92 ~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g---~ 167 (595)
+.|||||+.|++.. ...|+++++ ++ +
T Consensus 114 ~~~SpDg~~l~~~~--------------------------------------------------~~~i~~~d~~~~~~~~ 143 (741)
T 2ecf_A 114 YQWSPDAQRLLFPL--------------------------------------------------GGELYLYDLKQEGKAA 143 (741)
T ss_dssp CEECTTSSEEEEEE--------------------------------------------------TTEEEEEESSSCSTTS
T ss_pred eEECCCCCEEEEEe--------------------------------------------------CCcEEEEECCCCCcce
Confidence 99999999999862 135778888 55 5
Q ss_pred eeecCCC-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccccc------
Q 007620 168 AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV------ 240 (595)
Q Consensus 168 ~~~lt~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~------ 240 (595)
.++|+.. .....++|||||++|+|... ..|++||+.+++.+.+....... . .++.
T Consensus 144 ~~~l~~~~~~~~~~~~SPDG~~la~~~~--------------~~i~~~d~~~g~~~~~~~~~~~~---~-~~g~~~~v~~ 205 (741)
T 2ecf_A 144 VRQLTHGEGFATDAKLSPKGGFVSFIRG--------------RNLWVIDLASGRQMQLTADGSTT---I-GNGIAEFVAD 205 (741)
T ss_dssp CCBCCCSSSCEEEEEECTTSSEEEEEET--------------TEEEEEETTTTEEEECCCCCCSS---E-EESCCCHHHH
T ss_pred EEEcccCCcccccccCCCCCCEEEEEeC--------------CcEEEEecCCCCEEEeccCCccc---e-eccccceeee
Confidence 6667654 34568999999999999863 26999999988887775432110 0 0000
Q ss_pred --ccCCCCceeecCCCeeEEEEEeecCCCccc----------------------ccCCcceEEeccCCCCCC-CCceecc
Q 007620 241 --REGMRSISWRADKPSTLYWVEAQDRGDANV----------------------EVSPRDIIYTQPAEPAEG-EKPEILH 295 (595)
Q Consensus 241 --~~~~~~~~wspdg~~~l~~~~~~d~~~~~~----------------------~~~~~~~~~~~d~~~~~g-~~~~~l~ 295 (595)
......+.|||||+. |++... +.+.... .......++++|+ .+ ++...+.
T Consensus 206 ~~~~~~~~~~~SpDg~~-l~~~~~-d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~---~~~~~~~~~~ 280 (741)
T 2ecf_A 206 EEMDRHTGYWWAPDDSA-IAYARI-DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP---AEQAQTQWID 280 (741)
T ss_dssp HHSCCCCSEEECTTSSC-EEEEEE-ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS---STTCCCEEEC
T ss_pred eccccccceEECCCCCE-EEEEEE-cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC---CCCCceEEec
Confidence 000246899999985 655532 2211000 0011226778886 55 5665544
Q ss_pred c---cCccccceeecCCCcEEEEEEee-cccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 296 K---LDLRFRSVSWCDDSLALVNETWY-KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 296 ~---~~~~~~~~~wspDg~~l~~~~~~-~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
. ....+..+.| |||+.|++.... ......|+++|+.++ +.+.++.......+. ....+.|++||+ +++..
T Consensus 281 ~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~--~~~~~~~spdg~-~~~~~ 354 (741)
T 2ecf_A 281 LGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN--QQRVLAHETSPTWVP--LHNSLRFLDDGS-ILWSS 354 (741)
T ss_dssp CCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC--CEEEEEEEECSSCCC--CCSCCEECTTSC-EEEEE
T ss_pred CCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC--ceEEEEEcCCCCcCC--cCCceEECCCCe-EEEEe
Confidence 2 2334678999 999987765432 224568999999884 445554321110000 001278999999 44444
Q ss_pred eecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEEecCCC-
Q 007620 372 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTE- 450 (595)
Q Consensus 372 ~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~- 450 (595)
... ....|| .+++.++ .+.|+.... .+..+ ..|++|++.+++.... ..
T Consensus 355 ~~~--g~~~l~----------------~~~~~~~-~~~l~~~~~-----~v~~~------~~~s~dg~~l~~~~~~-~~~ 403 (741)
T 2ecf_A 355 ERT--GFQHLY----------------RIDSKGK-AAALTHGNW-----SVDEL------LAVDEKAGLAYFRAGI-ESA 403 (741)
T ss_dssp CTT--SSCEEE----------------EECSSSC-EEESCCSSS-----CEEEE------EEEETTTTEEEEEECS-SCT
T ss_pred cCC--CccEEE----------------EEcCCCC-eeeeeecce-----EEEeE------eEEeCCCCEEEEEEeC-CCC
Confidence 322 123454 4555433 444433211 11111 2478999988887653 33
Q ss_pred -cceEEEEeCCCCceeeEec
Q 007620 451 -ITQYHILSWPLKKSSQITN 469 (595)
Q Consensus 451 -p~~l~~~d~~~~~~~~Lt~ 469 (595)
-..||.++..++..++|+.
T Consensus 404 ~~~~l~~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 404 RESQIYAVPLQGGQPQRLSK 423 (741)
T ss_dssp TCBEEEEEETTCCCCEECCC
T ss_pred ceEEEEEEEcCCCCeeeccc
Confidence 3457777765555677765
No 16
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.82 E-value=5.8e-18 Score=176.29 Aligned_cols=246 Identities=14% Similarity=0.093 Sum_probs=174.7
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
..|+++|+. ++..+.++... ..+..++|||||++|||.+.. .+...|+++|+++|+.++++....
T Consensus 159 ~~i~i~d~~----g~~~~~l~~~~--~~v~~~~~Spdg~~la~~s~~-------~~~~~i~~~d~~tg~~~~l~~~~~-- 223 (415)
T 2hqs_A 159 YELRVSDYD----GYNQFVVHRSP--QPLMSPAWSPDGSKLAYVTFE-------SGRSALVIQTLANGAVRQVASFPR-- 223 (415)
T ss_dssp EEEEEEETT----SCSCEEEEEES--SCEEEEEECTTSSEEEEEECT-------TSSCEEEEEETTTCCEEEEECCSS--
T ss_pred ceEEEEcCC----CCCCEEEeCCC--CcceeeEEcCCCCEEEEEEec-------CCCcEEEEEECCCCcEEEeecCCC--
Confidence 579999996 77788887533 358899999999999998853 245789999999999888875543
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
.+..+.|||||+.|+|.... + ...+||++|+
T Consensus 224 ---~~~~~~~spdg~~la~~~~~---------------------~-------------------------g~~~i~~~d~ 254 (415)
T 2hqs_A 224 ---HNGAPAFSPDGSKLAFALSK---------------------T-------------------------GSLNLYVMDL 254 (415)
T ss_dssp ---CEEEEEECTTSSEEEEEECT---------------------T-------------------------SSCEEEEEET
T ss_pred ---cccCEEEcCCCCEEEEEEec---------------------C-------------------------CCceEEEEEC
Confidence 46789999999999986321 0 1246889999
Q ss_pred -CCCeeecCCCC-eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccccccc
Q 007620 165 -DGTAKDFGTPA-VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (595)
Q Consensus 165 -~g~~~~lt~~~-~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~ 242 (595)
+++.+.|+... ....++|||||++|++.+.... ...|+++|+.+++.+.+.... .
T Consensus 255 ~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g----------~~~i~~~d~~~~~~~~l~~~~-------------~ 311 (415)
T 2hqs_A 255 ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAG----------RPQVYKVNINGGAPQRITWEG-------------S 311 (415)
T ss_dssp TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSCCEECCCSS-------------S
T ss_pred CCCCEEeCcCCCCcccceEECCCCCEEEEEECCCC----------CcEEEEEECCCCCEEEEecCC-------------C
Confidence 56777776543 5568999999999999975321 247999999988766654321 1
Q ss_pred CCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeeccc
Q 007620 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS 322 (595)
Q Consensus 243 ~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~ 322 (595)
....+.|+|||+. |++... +. ....++++++ .+++.+.+.... ....+.|+|||..|++.... .+
T Consensus 312 ~~~~~~~spdG~~-l~~~~~-~~--------g~~~i~~~d~---~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~-~~ 376 (415)
T 2hqs_A 312 QNQDADVSSDGKF-MVMVSS-NG--------GQQHIAKQDL---ATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQ-GM 376 (415)
T ss_dssp EEEEEEECTTSSE-EEEEEE-CS--------SCEEEEEEET---TTCCEEECCCSS-SCEEEEECTTSSEEEEEEEE-TT
T ss_pred cccCeEECCCCCE-EEEEEC-cC--------CceEEEEEEC---CCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcC-CC
Confidence 1235889999984 555421 11 1246788886 555666666543 67789999999988776532 34
Q ss_pred ceEEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCC
Q 007620 323 QTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTST 363 (595)
Q Consensus 323 ~~~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~d 363 (595)
...||++|+++ +..+.|.. ..+.+ ++|+|.
T Consensus 377 ~~~l~~~d~~g--~~~~~l~~~~~~v~~---------~~~~~~ 408 (415)
T 2hqs_A 377 GSVLNLVSTDG--RFKARLPATDGQVKF---------PAWSPY 408 (415)
T ss_dssp EEEEEEEETTS--CCEEECCCSSSEEEE---------EEECCC
T ss_pred ccEEEEEECCC--CcEEEeeCCCCCCcC---------Cccccc
Confidence 55899999987 34555543 23444 778774
No 17
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=7.4e-18 Score=173.72 Aligned_cols=339 Identities=9% Similarity=0.049 Sum_probs=191.0
Q ss_pred CCCceeeecCCCC---CcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEE
Q 007620 18 LGPEKEVHGYPDG---AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW 94 (595)
Q Consensus 18 ~g~~~~lt~~~~~---~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~W 94 (595)
+...++|+..... ..+..++|||||++|||+... ++..+||++++++++.++++..... ....+.|
T Consensus 20 g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~-------~g~~~l~~~d~~~~~~~~l~~~~~~----~~~~~~~ 88 (396)
T 3c5m_A 20 QVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDF-------DGNRNYYLLNLETQQAVQLTEGKGD----NTFGGFI 88 (396)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT-------TSSCEEEEEETTTTEEEECCCSSCB----CTTTCEE
T ss_pred CcceEEEecCCCCccceeeecCcCCCCCCEEEEEEec-------CCCceEEEEECCCCcEEEeecCCCC----ccccceE
Confidence 4456777732211 126789999999999999864 3457899999999999998764431 1234899
Q ss_pred ecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeecCC
Q 007620 95 VNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT 173 (595)
Q Consensus 95 spdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~ 173 (595)
||||+.|+|.... .+|+++++ .++.++++.
T Consensus 89 spdg~~l~~~~~~-------------------------------------------------~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 89 STDERAFFYVKNE-------------------------------------------------LNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp CTTSSEEEEEETT-------------------------------------------------TEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEEEcC-------------------------------------------------CcEEEEECCCCCcEEEEe
Confidence 9999999997321 13566666 334444432
Q ss_pred C--Ceee-------------------eeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCcc
Q 007620 174 P--AVYT-------------------AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (595)
Q Consensus 174 ~--~~~~-------------------~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~ 232 (595)
. .... ...|||||++|++...... .....|+++|+.+++.+.+....
T Consensus 120 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~--------~~~~~l~~~d~~~g~~~~~~~~~---- 187 (396)
T 3c5m_A 120 VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT--------NPTCRLIKVDIETGELEVIHQDT---- 187 (396)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT--------CCCEEEEEEETTTCCEEEEEEES----
T ss_pred cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC--------CCcceEEEEECCCCcEEeeccCC----
Confidence 1 1000 1456677766655431000 01358999999988777665321
Q ss_pred CCccccccccCCCCceeec-CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecccc--CccccceeecCC
Q 007620 233 IPVCYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWCDD 309 (595)
Q Consensus 233 ~~~~~~~~~~~~~~~~wsp-dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~--~~~~~~~~wspD 309 (595)
.....+.|+| |++ .|+++.. ... ......|++++. ++++.+.+... ......+.||||
T Consensus 188 ---------~~~~~~~~sp~dg~-~l~~~~~--~~~----~~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spd 248 (396)
T 3c5m_A 188 ---------AWLGHPIYRPFDDS-TVGFCHE--GPH----DLVDARMWLVNE---DGSNVRKIKEHAEGESCTHEFWIPD 248 (396)
T ss_dssp ---------SCEEEEEEETTEEE-EEEEEEC--SCS----SSCSCCCEEEET---TSCCCEESSCCCTTEEEEEEEECTT
T ss_pred ---------cccccceECCCCCC-EEEEEec--CCC----CCCCceEEEEEC---CCCceeEeeccCCCccccceEECCC
Confidence 1123578999 665 3666521 110 011135777776 55566666653 224567899999
Q ss_pred CcEEEEEEeecc-cceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCC-CCCEEEEEeeecCCcccEEEEecCC
Q 007620 310 SLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRG 387 (595)
Q Consensus 310 g~~l~~~~~~~~-~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~l~~~~~g 387 (595)
|+.|++...... ....|+++|+.+ ++.+.+....... +.|++ ||+.+++.... . + +.....+
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~--g~~~~l~~~~~~~---------~~~s~~dg~~l~~~~~~-~-p---~~~~~~~ 312 (396)
T 3c5m_A 249 GSAMAYVSYFKGQTDRVIYKANPET--LENEEVMVMPPCS---------HLMSNFDGSLMVGDGCD-A-P---VDVADAD 312 (396)
T ss_dssp SSCEEEEEEETTTCCEEEEEECTTT--CCEEEEEECCSEE---------EEEECSSSSEEEEEECC-C------------
T ss_pred CCEEEEEecCCCCccceEEEEECCC--CCeEEeeeCCCCC---------CCccCCCCceEEEecCC-c-c---eeecccc
Confidence 997776643221 223599999988 3445554322111 68899 99976654311 0 0 0000000
Q ss_pred CCCCCCcceeEeeecCCCceeeeeecCccccceee-EEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceee
Q 007620 388 FTPEGNIPFLDLFDINTGSKERIWESNREKYFETA-VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (595)
Q Consensus 388 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~ 466 (595)
.........++.+|+.+++.++|...... .... ...........|++|++.|++..... ..++||++++.+++.+.
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSAQKLCKHSTS--WDVLDGDRQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPESYKHL 389 (396)
T ss_dssp --CCCCCCEEEEEETTTTBCCEEEECCCC--CCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTTCC--
T ss_pred ccccCCCCcEEEEecccCceEEccCCCCc--cccccccccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEccccccc
Confidence 00001122345678877877666543210 0000 00000001246899999998887654 46679999987765443
No 18
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=2.4e-17 Score=184.80 Aligned_cols=332 Identities=11% Similarity=0.043 Sum_probs=194.7
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc-ccccccceEEecCCcEEEEEecCCCCC
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC-LNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~-~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
...++|||||+.|+. . ...|+++++++|+.+++....... ......++.|||||+.|+|....
T Consensus 19 ~~~~~w~~dg~~~~~-~-----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~---- 82 (740)
T 4a5s_A 19 LYSLRWISDHEYLYK-Q-----------ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNY---- 82 (740)
T ss_dssp CCCEEECSSSEEEEE-E-----------TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEE----
T ss_pred ccccEECCCCcEEEE-c-----------CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECC----
Confidence 558999999975544 2 147899999999877775443211 11112348999999999996321
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeecCC-CCeeeeeEECCCCCeE
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT-PAVYTAVEPSPDQKYV 189 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~-~~~~~~~~~SpDg~~l 189 (595)
. ..+ .+. ....+|++|+ +|+.++|+. ......++|||||++|
T Consensus 83 ------------------~-----~~~------r~~-------~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~l 126 (740)
T 4a5s_A 83 ------------------V-----KQW------RHS-------YTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKL 126 (740)
T ss_dssp ------------------E-----ECS------SSC-------EEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCE
T ss_pred ------------------e-----eeE------EEc-------cceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEE
Confidence 0 000 000 2467899999 667778875 3456789999999999
Q ss_pred EEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccc---------cCCCCceeecCCCeeEEEE
Q 007620 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR---------EGMRSISWRADKPSTLYWV 260 (595)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~wspdg~~~l~~~ 260 (595)
+|+.. .+|+++++.++..++|+....... .+++.. ...+.+.|||||+. |++.
T Consensus 127 a~~~~--------------~~i~~~~~~~~~~~~lt~~g~~~~---~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~ 188 (740)
T 4a5s_A 127 AYVWN--------------NDIYVKIEPNLPSYRITWTGKEDI---IYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYA 188 (740)
T ss_dssp EEEET--------------TEEEEESSTTSCCEECCSCCBTTT---EEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEE
T ss_pred EEEEC--------------CeEEEEECCCCceEEEcCCCCccc---eecCcccccccchhcCCCcceEECCCCCE-EEEE
Confidence 99963 279999999888888764321100 011110 11235889999985 6665
Q ss_pred EeecCCCcccc------------------------cCCcceEEeccCCCCCC---C---Cceeccc------cCccccce
Q 007620 261 EAQDRGDANVE------------------------VSPRDIIYTQPAEPAEG---E---KPEILHK------LDLRFRSV 304 (595)
Q Consensus 261 ~~~d~~~~~~~------------------------~~~~~~~~~~d~~~~~g---~---~~~~l~~------~~~~~~~~ 304 (595)
...+..-.... ......++++++ ++ + +...+.. ....+..+
T Consensus 189 ~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 265 (740)
T 4a5s_A 189 QFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT---DSLSSVTNATSIQITAPASMLIGDHYLCDV 265 (740)
T ss_dssp EEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET---TSCCSSSCCCEEEECCCHHHHTSCEEEEEE
T ss_pred EEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC---CCCCCCCcceEEEecCCccCCCCCeEEEEE
Confidence 43222110000 011125778886 54 4 3444432 33346789
Q ss_pred eecCCCcEEEEEEeecccceEEEEEeCCCCCC-----CcEEEe-ecccccccCCCCCCCeeeCCCCCEEE-EEeeecCCc
Q 007620 305 SWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-----APRVLF-DRVFENVYSDPGSPMMTRTSTGTNVI-AKIKKENDE 377 (595)
Q Consensus 305 ~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~-----~~~~l~-~~~~~~~~~~~~~~~~~~~~dg~~l~-~~~~~~~~~ 377 (595)
.|||||+.+++..........|+++|+++++. ..+.+. +..-. .+.......+.|+|||+.++ +..... .
T Consensus 266 ~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~-~v~~~~~~~p~fspDG~~l~~~~s~~~--G 342 (740)
T 4a5s_A 266 TWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTG-WVGRFRPSEPHFTLDGNSFYKIISNEE--G 342 (740)
T ss_dssp EEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSS-CSSSSSCCCCEECTTSSEEEEEEECTT--S
T ss_pred EEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCc-eEccCcCCCceEcCCCCEEEEEEEcCC--C
Confidence 99999987665543333456799999988420 022221 11110 00000001278999999887 443322 1
Q ss_pred ccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEEec---CCCcceE
Q 007620 378 QIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES---KTEITQY 454 (595)
Q Consensus 378 ~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s---~~~p~~l 454 (595)
...|| .+|+.+++.++|+..... +..+ +++|++.++|.... ...-..|
T Consensus 343 ~~~l~----------------~~~~~~~~~~~lT~g~~~-----v~~~--------~~~d~~~i~f~~~~~~~~~~~~~l 393 (740)
T 4a5s_A 343 YRHIC----------------YFQIDKKDCTFITKGTWE-----VIGI--------EALTSDYLYYISNEYKGMPGGRNL 393 (740)
T ss_dssp CEEEE----------------EEETTCSSCEESCCSSSC-----EEEE--------EEECSSEEEEEESCGGGCTTCBEE
T ss_pred ceEEE----------------EEECCCCceEecccCCEE-----EEEE--------EEEeCCEEEEEEecCCCCCceeEE
Confidence 23444 567777777788754321 1111 23467888888754 1223578
Q ss_pred EEEeCCCCcee-eEec
Q 007620 455 HILSWPLKKSS-QITN 469 (595)
Q Consensus 455 ~~~d~~~~~~~-~Lt~ 469 (595)
|.+++.+++.+ +||.
T Consensus 394 y~v~~~g~~~~~~lt~ 409 (740)
T 4a5s_A 394 YKIQLIDYTKVTCLSC 409 (740)
T ss_dssp EEEETTEEEEEEESST
T ss_pred EEEECCCCCcceeecc
Confidence 99998766554 6773
No 19
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=4.2e-16 Score=153.00 Aligned_cols=262 Identities=12% Similarity=0.042 Sum_probs=174.9
Q ss_pred eeeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCC-CceEecccCCC
Q 007620 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET-GEAKPLFESPD 82 (595)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~-g~~~~lt~~~~ 82 (595)
...|+++|+. +++.+++.... ..+..++|||||++||+.. ...|+++++++ ++..+++....
T Consensus 21 ~~~i~~~d~~----~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~-----------~~~i~~~d~~~~~~~~~~~~~~~ 83 (297)
T 2ojh_A 21 RSSIEIFNIR----TRKMRVVWQTP--ELFEAPNWSPDGKYLLLNS-----------EGLLYRLSLAGDPSPEKVDTGFA 83 (297)
T ss_dssp CEEEEEEETT----TTEEEEEEEES--SCCEEEEECTTSSEEEEEE-----------TTEEEEEESSSCCSCEECCCTTC
T ss_pred ceeEEEEeCC----CCceeeeccCC--cceEeeEECCCCCEEEEEc-----------CCeEEEEeCCCCCCceEeccccc
Confidence 4579999998 78888777543 3588999999999999864 24799999999 88887764332
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEE
Q 007620 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (595)
Q Consensus 83 ~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (595)
. ..+..+.|+|||+.|++..... + ...+||.+
T Consensus 84 ~---~~~~~~~~spdg~~l~~~~~~~--------------------------------------~-------~~~~l~~~ 115 (297)
T 2ojh_A 84 T---ICNNDHGISPDGALYAISDKVE--------------------------------------F-------GKSAIYLL 115 (297)
T ss_dssp C---CBCSCCEECTTSSEEEEEECTT--------------------------------------T-------SSCEEEEE
T ss_pred c---ccccceEECCCCCEEEEEEeCC--------------------------------------C-------CcceEEEE
Confidence 1 1456899999999998863210 0 13578888
Q ss_pred cC-CCCeeecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccc
Q 007620 163 SL-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (595)
Q Consensus 163 d~-~g~~~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~ 241 (595)
++ .++.+.+........+.|||||++|+++..... ...||.+++.++..+.+....
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----------~~~l~~~~~~~~~~~~~~~~~------------- 172 (297)
T 2ojh_A 116 PSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQ----------VFDIYSMDIDSGVETRLTHGE------------- 172 (297)
T ss_dssp ETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETT----------EEEEEEEETTTCCEEECCCSS-------------
T ss_pred ECCCCceEEeecCCCccceEECCCCCEEEEEECCCC----------ceEEEEEECCCCcceEcccCC-------------
Confidence 88 456777765554567899999999998765432 236788888877776665432
Q ss_pred cCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecc
Q 007620 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT 321 (595)
Q Consensus 242 ~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~ 321 (595)
.....+.|+|||+. |++....+ ....++.++. .++..+.+.........+.|+|||+.|++......
T Consensus 173 ~~~~~~~~s~dg~~-l~~~~~~~---------~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 173 GRNDGPDYSPDGRW-IYFNSSRT---------GQMQIWRVRV---DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp SCEEEEEECTTSSE-EEEEECTT---------SSCEEEEEET---TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETT
T ss_pred CccccceECCCCCE-EEEEecCC---------CCccEEEECC---CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCC
Confidence 11245889999984 44431111 1235666664 44456666655556677999999998776643211
Q ss_pred -------cceEEEEEeCCCCCCCcEEEeecc-cccccCCCCCCCeeeCCCCCEEEEEeee
Q 007620 322 -------SQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (595)
Q Consensus 322 -------~~~~L~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~dg~~l~~~~~~ 373 (595)
....|+++|+.++ +.+.+.... ..... ..+.|+|||+.|++...+
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~-----~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGG--NVETLFDLFGGQGTM-----NSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSC--SCEEEEEEEESTTTS-----CSCCBCTTSSEEEEEEEC
T ss_pred CCcccccCceEEEEEecCCC--CceeeeccCCCCccc-----ccceECCCCCEEEEEEec
Confidence 2357999999884 445443210 00001 127899999998887643
No 20
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=2.7e-16 Score=161.77 Aligned_cols=309 Identities=9% Similarity=0.012 Sum_probs=189.1
Q ss_pred ceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccc
Q 007620 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (595)
Q Consensus 61 ~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 140 (595)
..++|+....+++.++||..........+..+.|||||+.|+|.... +
T Consensus 10 ~~~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~---------------------~----------- 57 (388)
T 3pe7_A 10 TFDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF---------------------D----------- 57 (388)
T ss_dssp CCEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT---------------------T-----------
T ss_pred cceEEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcC---------------------C-----------
Confidence 46788866666778999865531111122348999999999997421 0
Q ss_pred cccCcCCccceEEeecceEEEEcC-CCCeeecCCCCe--eeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC
Q 007620 141 LLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAV--YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (595)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~~~~--~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (595)
...+||++++ +|+.++++.... ...+.|||||++|+|.... ..|+++|+.
T Consensus 58 --------------g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-------------~~l~~~d~~ 110 (388)
T 3pe7_A 58 --------------GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-------------RNLMRVDLA 110 (388)
T ss_dssp --------------SSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-------------TEEEEEETT
T ss_pred --------------CCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-------------CeEEEEECC
Confidence 1347999999 568888876532 2257899999999999742 379999999
Q ss_pred CceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcc-----------cccCCcceEEeccCCCC
Q 007620 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN-----------VEVSPRDIIYTQPAEPA 286 (595)
Q Consensus 218 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~-----------~~~~~~~~~~~~d~~~~ 286 (595)
+++.+.+...+.... .......++|++. ++.+.. +..+.. ........++++++
T Consensus 111 ~g~~~~~~~~~~~~~----------~~~~~~~~~dg~~-l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~--- 175 (388)
T 3pe7_A 111 TLEENVVYQVPAEWV----------GYGTWVANSDCTK-LVGIEI-RREDWVPLTDWKKFHEFYFTKPCCRLMRVDL--- 175 (388)
T ss_dssp TCCEEEEEECCTTEE----------EEEEEEECTTSSE-EEEEEE-EGGGCCCCCSHHHHHHHGGGCCCEEEEEEET---
T ss_pred CCcceeeeechhhcc----------cccceeECCCCCe-eccccc-cCcccccccccchhhhhhccCCcceEEEEEC---
Confidence 888777765431100 0001233788874 333321 111100 00123357888887
Q ss_pred CCCCceeccccCccccceeecC-CCcEEEEEEeec--ccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCC
Q 007620 287 EGEKPEILHKLDLRFRSVSWCD-DSLALVNETWYK--TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTST 363 (595)
Q Consensus 287 ~g~~~~~l~~~~~~~~~~~wsp-Dg~~l~~~~~~~--~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d 363 (595)
.+++.+.+......+..+.||| ||+.|++..... ....+||++|+++ ++.+.|.......... .+.|+||
T Consensus 176 ~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~~~-----~~~~spd 248 (388)
T 3pe7_A 176 KTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--TNMRKVKTHAEGESCT-----HEFWVPD 248 (388)
T ss_dssp TTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--CCCEESCCCCTTEEEE-----EEEECTT
T ss_pred CCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--CceEEeeeCCCCcccc-----cceECCC
Confidence 5567777776666678899999 999887765321 1245899999987 4556665332100000 1789999
Q ss_pred CCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceeeEEeeeCCCcccccccCCEEEE
Q 007620 364 GTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILT 443 (595)
Q Consensus 364 g~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~ 443 (595)
|+.|++.....+.....+ +.+|+++|+.+.++.... ............|++||+.+++
T Consensus 249 g~~l~~~~~~~~~~~~~l----------------~~~d~~~g~~~~l~~~~~------~~~~~~~~~~~~~spdg~~l~~ 306 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFI----------------YSADPETLENRQLTSMPA------CSHLMSNYDGSLMVGDGSDAPV 306 (388)
T ss_dssp SSCEEEEEEETTCCCEEE----------------EEECTTTCCEEEEEEECC------EEEEEECTTSSEEEEEECCC--
T ss_pred CCEEEEEecCCCCCcceE----------------EEEecCCCceEEEEcCCC------ceeeeecCCCCeEccCCCccee
Confidence 998877765432111123 357888888777654321 0000000112368999998887
Q ss_pred EEec-----CCCcceEEEEeCCCCceeeEecCCC
Q 007620 444 SKES-----KTEITQYHILSWPLKKSSQITNFPH 472 (595)
Q Consensus 444 ~~~s-----~~~p~~l~~~d~~~~~~~~Lt~~~~ 472 (595)
.... .....+||++++.+++.++|+....
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 340 (388)
T 3pe7_A 307 DVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDT 340 (388)
T ss_dssp ----------CCCCEEEEEETTTTEEEEEEECCC
T ss_pred EeeeccccccCCCCEEEEEeccCCceEEeccccC
Confidence 6542 2556789999999999999997753
No 21
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.75 E-value=4.6e-16 Score=157.43 Aligned_cols=310 Identities=13% Similarity=0.116 Sum_probs=186.2
Q ss_pred CCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEec
Q 007620 27 YPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIP 106 (595)
Q Consensus 27 ~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~ 106 (595)
+.....+..|++ ||++|||+........ .....+||++++++++.++| . .+..+.|||||+.|+|...
T Consensus 11 l~~~~~~~~~~~--dG~~i~~~~~~~~~~~-~~~~~~l~~~d~~~~~~~~l---~------~~~~~~~SpDg~~la~~~~ 78 (347)
T 2gop_A 11 FAKFAYLSDPRT--KGELVAYVLTKANLKD-NKYENTIVIENLKNNARRFI---E------NATMPRISPDGKKIAFMRA 78 (347)
T ss_dssp CCCSCEEEEEEE--ETTEEEEEEEEEETTT-TEEEEEEEEEETTTCCEEEE---E------SCEEEEECTTSSEEEEEEE
T ss_pred ceeeEEcccceE--CCcEEEEEEeecCccc-CCccceEEEEeCCCCceEEc---c------cCCCeEECCCCCEEEEEEe
Confidence 334446788999 9999999875421000 02357899999999998887 1 3568999999999999732
Q ss_pred CCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeecCCCCeeeeeEECCC
Q 007620 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAVYTAVEPSPD 185 (595)
Q Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~~~~~~~~~~SpD 185 (595)
.. + . ...+||++++ .|+.++++.......+.||||
T Consensus 79 ~~---------------------~-----------------~------~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspd 114 (347)
T 2gop_A 79 NE---------------------E-----------------K------KVSEIWVADLETLSSKKILEAKNIRSLEWNED 114 (347)
T ss_dssp ET---------------------T-----------------T------TEEEEEEEETTTTEEEEEEEESEEEEEEECTT
T ss_pred cc---------------------C-----------------C------CcceEEEEECCCCceEEEEcCCCccceeECCC
Confidence 10 0 0 1357999999 457777754322668999999
Q ss_pred CCeEEEEEcccCccc------cccCc--------ccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceee
Q 007620 186 QKYVLITSMHRPYSY------KVPCA--------RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWR 250 (595)
Q Consensus 186 g~~l~~~~~~~~~~~------~~~~~--------~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~ws 250 (595)
|++|+|....++... .+++. .....|+++|+.+++. +.+.. + . ...+.|+
T Consensus 115 g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~-------------~~~~~~s 179 (347)
T 2gop_A 115 SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-R-------------FSSGIWH 179 (347)
T ss_dssp SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-T-------------TCEEEEE
T ss_pred CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-C-------------cccccCC
Confidence 999999975311000 00000 0135799999998877 66654 2 1 2468899
Q ss_pred cCCCeeEEEEEeecCCCcccccCC-cceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecc----cceE
Q 007620 251 ADKPSTLYWVEAQDRGDANVEVSP-RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT----SQTR 325 (595)
Q Consensus 251 pdg~~~l~~~~~~d~~~~~~~~~~-~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~----~~~~ 325 (595)
||| +++....+.... ... ...++.++ +++.+.+... ... ..+||||+.|++...... ...+
T Consensus 180 pdg---~~~~~~~~~~~~---~~~~~~~l~~~d-----~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~~~~~~ 245 (347)
T 2gop_A 180 RDK---IVVNVPHREIIP---QYFKFWDIYIWE-----DGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKKYMSEHNK 245 (347)
T ss_dssp TTE---EEEEEECCCSSC---CSSCCEEEEEEE-----TTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSSCCCSSCE
T ss_pred CCe---EEEEEecccccc---cccccccEEEeC-----CCceEEeccC-cce--eeECCCCCEEEEEEccccCCccccce
Confidence 998 444422221100 001 23566655 2466666654 333 334999998776643211 2458
Q ss_pred EEEEeCCCCCCCcEEEeec---ccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeec
Q 007620 326 TWLVCPGSKDVAPRVLFDR---VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 402 (595)
Q Consensus 326 L~~~d~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~ 402 (595)
||++| + ++.+.++.. .+.. .+.|+ || +++.....+ ...| + ++
T Consensus 246 l~~~d--~--~~~~~l~~~~~~~~~~--------~~~~s-dg--~~~~~~~~~--~~~l----------------~-~~- 290 (347)
T 2gop_A 246 LYIYD--G--KEVMGILDEVDRGVGQ--------AKIKD-GK--VYFTLFEEG--SVNL----------------Y-IW- 290 (347)
T ss_dssp EEEEC--S--SCEEESSTTCCSEEEE--------EEEET-TE--EEEEEEETT--EEEE----------------E-EE-
T ss_pred EEEEC--C--CceEeccccCCcccCC--------ccEEc-Cc--EEEEEecCC--cEEE----------------E-Ec-
Confidence 99999 4 344555422 1211 16788 87 555544321 2233 3 34
Q ss_pred CCCceeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCCCC
Q 007620 403 NTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYP 475 (595)
Q Consensus 403 ~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~~~ 475 (595)
+|+...++... ..+.. ..+++ .++++.++...|++||.++ ++.++||..|..++
T Consensus 291 -~g~~~~~~~~~-----~~v~~-------~~~s~---~~~~~~~~~~~~~~l~~~~---g~~~~lt~~n~~~l 344 (347)
T 2gop_A 291 -DGEIKPIAKGR-----HWIMG-------FDVDE---IVVYLKETATRLRELFTWD---GEEKQLTDYNDPIF 344 (347)
T ss_dssp -SSSEEEEECSS-----SEEEE-------EEESS---SEEEEEECSSSCCEEEEES---SSEEECCCTTSTTT
T ss_pred -CCceEEEecCC-----CeEEe-------eeeeC---cEEEEEcCCCChHHheEeC---CcEEEeccccHhHH
Confidence 35555554321 11111 23454 5788888999999999998 67889999976543
No 22
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.75 E-value=5.5e-16 Score=161.35 Aligned_cols=230 Identities=17% Similarity=0.172 Sum_probs=158.3
Q ss_pred CCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCC
Q 007620 41 DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPL 120 (595)
Q Consensus 41 DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~ 120 (595)
.+++|+|++..... +....|+++|++++..+.++.... .+..+.|||||+.|++...+
T Consensus 142 ~~~~l~~~s~~~~~----~~~~~i~i~d~~g~~~~~l~~~~~-----~v~~~~~Spdg~~la~~s~~------------- 199 (415)
T 2hqs_A 142 FRTRIAYVVQTNGG----QFPYELRVSDYDGYNQFVVHRSPQ-----PLMSPAWSPDGSKLAYVTFE------------- 199 (415)
T ss_dssp TTCEEEEEEECSSS----SCCEEEEEEETTSCSCEEEEEESS-----CEEEEEECTTSSEEEEEECT-------------
T ss_pred CCCEEEEEEecCCC----CccceEEEEcCCCCCCEEEeCCCC-----cceeeEEcCCCCEEEEEEec-------------
Confidence 48899999864210 112799999999888888875543 46789999999999997321
Q ss_pred CCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeecCCC-CeeeeeEECCCCCeEEEEEcccCc
Q 007620 121 GPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPY 198 (595)
Q Consensus 121 g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~~-~~~~~~~~SpDg~~l~~~~~~~~~ 198 (595)
+ ....|+++|+ +|+.+.+... .....++|||||++|+|+.....
T Consensus 200 ---------~------------------------~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g- 245 (415)
T 2hqs_A 200 ---------S------------------------GRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG- 245 (415)
T ss_dssp ---------T------------------------SSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTS-
T ss_pred ---------C------------------------CCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCC-
Confidence 0 1246888898 6677666543 35568999999999998865322
Q ss_pred cccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceE
Q 007620 199 SYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDII 278 (595)
Q Consensus 199 ~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~ 278 (595)
...|++||+.+++.+.+..... ....+.|+|||+. |++... +. ....+
T Consensus 246 ---------~~~i~~~d~~~~~~~~l~~~~~-------------~~~~~~~spdg~~-l~~~s~-~~--------g~~~i 293 (415)
T 2hqs_A 246 ---------SLNLYVMDLASGQIRQVTDGRS-------------NNTEPTWFPDSQN-LAFTSD-QA--------GRPQV 293 (415)
T ss_dssp ---------SCEEEEEETTTCCEEECCCCSS-------------CEEEEEECTTSSE-EEEEEC-TT--------SSCEE
T ss_pred ---------CceEEEEECCCCCEEeCcCCCC-------------cccceEECCCCCE-EEEEEC-CC--------CCcEE
Confidence 2479999999887777654321 1235899999984 555421 11 12368
Q ss_pred EeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecc-cccccCCCCCCC
Q 007620 279 YTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPM 357 (595)
Q Consensus 279 ~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 357 (595)
+++++ .+++.+.+.........+.|||||+.|++.... .+...|+++|++++ +.+.+.... +..
T Consensus 294 ~~~d~---~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~-~g~~~i~~~d~~~~--~~~~l~~~~~~~~--------- 358 (415)
T 2hqs_A 294 YKVNI---NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLATG--GVQVLSSTFLDET--------- 358 (415)
T ss_dssp EEEET---TSSCCEECCCSSSEEEEEEECTTSSEEEEEEEC-SSCEEEEEEETTTC--CEEECCCSSSCEE---------
T ss_pred EEEEC---CCCCEEEEecCCCcccCeEECCCCCEEEEEECc-CCceEEEEEECCCC--CEEEecCCCCcCC---------
Confidence 88886 555666665555556689999999988776532 23468999999884 445554322 222
Q ss_pred eeeCCCCCEEEEEeee
Q 007620 358 MTRTSTGTNVIAKIKK 373 (595)
Q Consensus 358 ~~~~~dg~~l~~~~~~ 373 (595)
+.|+|||+.|++...+
T Consensus 359 ~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 359 PSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp EEECTTSSEEEEEEEE
T ss_pred eEEcCCCCEEEEEEcC
Confidence 8999999999887754
No 23
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=1.4e-15 Score=169.61 Aligned_cols=295 Identities=13% Similarity=0.156 Sum_probs=178.3
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCC-----CceEeccc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET-----GEAKPLFE 79 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~-----g~~~~lt~ 79 (595)
..|+++|+. +++.++++... ..+..++|||||++|||+. ..+||++++++ |+.++++.
T Consensus 101 ~~i~~~d~~----~~~~~~l~~~~--~~~~~~~~SpdG~~la~~~-----------~~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 101 GGLVGFDML----ARKVTYLFDTN--EETASLDFSPVGDRVAYVR-----------NHNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp TEEEEEETT----TTEEEEEECCT--TCCTTCEECTTSSEEEEEE-----------TTEEEEEECBCTTSCCCCCEESCS
T ss_pred CEEEEEECC----CCceEEccCCc--ccccCCcCCCCCCEEEEEE-----------CCeEEEEecCcccccCCCcEEecc
Confidence 468999997 78888887432 3588999999999999963 25799999999 99888876
Q ss_pred CCCccc-cc---------cccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCcc
Q 007620 80 SPDICL-NA---------VFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDES 149 (595)
Q Consensus 80 ~~~~~~-~~---------~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 149 (595)
.....+ ++ .+..+.|||||+.|++...+..... . ........... . ... ..++....
T Consensus 164 ~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~-~------~~~~~~~~~~~----~-~~~-~~y~~~g~ 230 (706)
T 2z3z_A 164 DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVK-P------TPIVDYHPLEA----E-SKP-LYYPMAGT 230 (706)
T ss_dssp CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSC-C------EEEEECCSSSC----E-EEE-ECCCBTTS
T ss_pred CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCc-e------EEeeccCCCCC----c-eEE-eeCCCCCC
Confidence 543210 00 0368999999999999753221110 0 00000000000 0 000 01111110
Q ss_pred ceEEeecceEEEEcC-CCCeeecCCC----CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCc-eEEE
Q 007620 150 LFDYYTTAQLVLGSL-DGTAKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRE 223 (595)
Q Consensus 150 ~~~~~~~~~l~~~d~-~g~~~~lt~~----~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~ 223 (595)
. ....+|+++|+ +++.+.+... .....++|||||++|++...++.. ....|++||+.++ ..+.
T Consensus 231 ~---~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--------~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 231 P---SHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ--------NECKVNAYDAETGRFVRT 299 (706)
T ss_dssp C---CCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS--------CEEEEEEEETTTCCEEEE
T ss_pred C---CCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC--------CeeEEEEEECCCCceeeE
Confidence 0 12468999999 5566666532 245689999999999998754321 1348999999877 6655
Q ss_pred eccCCCCccCCccccccccCCCCceeec--CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccc
Q 007620 224 LCDLPPAEDIPVCYNSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF 301 (595)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~wsp--dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~ 301 (595)
+........ ......+.|+| ||+ +++.... .....++.++. +++..+.++......
T Consensus 300 ~~~~~~~~~--------~~~~~~~~~sp~~dg~--~l~~~~~---------~g~~~l~~~~~---~~~~~~~l~~~~~~v 357 (706)
T 2z3z_A 300 LFVETDKHY--------VEPLHPLTFLPGSNNQ--FIWQSRR---------DGWNHLYLYDT---TGRLIRQVTKGEWEV 357 (706)
T ss_dssp EEEEECSSC--------CCCCSCCEECTTCSSE--EEEEECT---------TSSCEEEEEET---TSCEEEECCCSSSCE
T ss_pred EEEccCCCe--------ECccCCceeecCCCCE--EEEEEcc---------CCccEEEEEEC---CCCEEEecCCCCeEE
Confidence 532110000 00013578999 987 3333111 11235777674 555566676555545
Q ss_pred cc-eeecCCCcEEEEEEeecc-cceEEEEEeCCCCCCCcEEEee-cccccccCCCCCCCeeeCCCCCEEEEEeee
Q 007620 302 RS-VSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFD-RVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (595)
Q Consensus 302 ~~-~~wspDg~~l~~~~~~~~-~~~~L~~~d~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~ 373 (595)
.. +.|||||..|++....+. ...+||.+|++++ +.+.|.. ..+.. +.|+|||+.+++....
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~---------~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG--KTKDLTPESGMHR---------TQLSPDGSAIIDIFQS 421 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC--CCEESCCSSSEEE---------EEECTTSSEEEEEEEC
T ss_pred EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC--CceeccCCCceEE---------EEECCCCCEEEEEecC
Confidence 44 799999998777653321 2458999999883 4555542 22222 7899999998877543
No 24
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.74 E-value=5.2e-16 Score=173.48 Aligned_cols=308 Identities=9% Similarity=0.077 Sum_probs=178.7
Q ss_pred ceeeeEEEecCCCCCCCCceeeecCCCCC-cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCC
Q 007620 3 FFTGIGIHRLLPDDSLGPEKEVHGYPDGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (595)
Q Consensus 3 ~~~~~~~~~~~~~~~~g~~~~lt~~~~~~-~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~ 81 (595)
+...|||+|+. +|+.++++...... .+..++|||||++|||++. .+||++++++|+.++++...
T Consensus 89 ~~~~i~~~d~~----~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-----------~~i~~~~~~~g~~~~~~~~~ 153 (723)
T 1xfd_A 89 YTGYYVLSKIP----HGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-----------NNIYYCAHVGKQAIRVVSTG 153 (723)
T ss_dssp CCSEEEEEESS----SCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-----------TEEEEESSSSSCCEEEECCC
T ss_pred ceeeEEEEECC----CCceEeccCCccccccccccEECCCCCEEEEEEC-----------CeEEEEECCCCceEEEecCC
Confidence 34789999998 78777887433221 2678999999999999872 47999999999998887653
Q ss_pred Cccc--c------------ccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCC
Q 007620 82 DICL--N------------AVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYD 147 (595)
Q Consensus 82 ~~~~--~------------~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 147 (595)
.... + ..+..+.|||||+.|++...+..... .+........ ....... +.++.+
T Consensus 154 ~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~----------~~~~~~~~~~-~~~~~~~-~~~~~~ 221 (723)
T 1xfd_A 154 KEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVP----------IMELPTYTGS-IYPTVKP-YHYPKA 221 (723)
T ss_dssp BTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSC----------EEEECCCSSS-SSCCCEE-EECCBT
T ss_pred CCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccc----------eEEeeccCCc-CCCccee-ccCCCC
Confidence 2110 0 01247999999999999754321110 0000000000 0000000 111111
Q ss_pred ccceEEeecceEEEEcC-CCC-eeecCCC-------CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC
Q 007620 148 ESLFDYYTTAQLVLGSL-DGT-AKDFGTP-------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (595)
Q Consensus 148 ~~~~~~~~~~~l~~~d~-~g~-~~~lt~~-------~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g 218 (595)
+.. .....|+++|+ +++ .+.|+.. .....++|||||+.|++...... ....|++||+.+
T Consensus 222 G~~---~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~---------~~~~i~~~d~~~ 289 (723)
T 1xfd_A 222 GSE---NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQ---------NVSILTLCDATT 289 (723)
T ss_dssp TSC---CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTS---------CEEEEEEEETTT
T ss_pred CCC---CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCC---------CeEEEEEEeCCC
Confidence 110 12358999999 455 4667643 24468999999998876654321 135799999988
Q ss_pred ceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCC---ceecc
Q 007620 219 KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILH 295 (595)
Q Consensus 219 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~---~~~l~ 295 (595)
++...+......... ......+.|+|||+. |++......+.. .....+++++. .++++ .+.|+
T Consensus 290 g~~~~~~~~~~~~~~-------~~~~~~~~~spdg~~-l~~~~~~~~~~~----~~~~~l~~~d~--~~~~~~~~~~~l~ 355 (723)
T 1xfd_A 290 GVCTKKHEDESEAWL-------HRQNEEPVFSKDGRK-FFFIRAIPQGGR----GKFYHITVSSS--QPNSSNDNIQSIT 355 (723)
T ss_dssp CCEEEEEEEECSSCC-------CCCCCCCEECTTSCS-EEEEEEECCSSS----SCEEEEEEECS--SCCSSSCCCCBSC
T ss_pred CcceEEEEeccCCEE-------eccCCCceEcCCCCe-EEEEEecccCCC----cceeEEEEEec--cCCCCccceeEee
Confidence 776554321100000 000136899999985 555422111100 01236777772 14556 66676
Q ss_pred ccCcccc-ceeecCCCcEEEEEEeec-ccceEEEEEeCCCCCCCcEEEee-----cccccccCCCCCCCeeeCCCCCEEE
Q 007620 296 KLDLRFR-SVSWCDDSLALVNETWYK-TSQTRTWLVCPGSKDVAPRVLFD-----RVFENVYSDPGSPMMTRTSTGTNVI 368 (595)
Q Consensus 296 ~~~~~~~-~~~wspDg~~l~~~~~~~-~~~~~L~~~d~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~dg~~l~ 368 (595)
....... .+.|||||+.|++....+ ....+||.++++++ ...+.|.. ..+. .+.|+|||+.++
T Consensus 356 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~l~~~~~~~~~~~---------~~~~spdg~~l~ 425 (723)
T 1xfd_A 356 SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN-FNRQCLSCDLVENCTYF---------SASFSHSMDFFL 425 (723)
T ss_dssp CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT-CCCBCSSTTSSSSCCCC---------EEEECTTSSEEE
T ss_pred cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC-CCcceecccccCCCCeE---------EEEECCCCCEEE
Confidence 5444333 368999999887765332 14568999998763 13344432 1122 278999999998
Q ss_pred EEeee
Q 007620 369 AKIKK 373 (595)
Q Consensus 369 ~~~~~ 373 (595)
+....
T Consensus 426 ~~~~~ 430 (723)
T 1xfd_A 426 LKCEG 430 (723)
T ss_dssp EECCS
T ss_pred EEccC
Confidence 87654
No 25
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.72 E-value=7.3e-16 Score=172.23 Aligned_cols=329 Identities=10% Similarity=0.015 Sum_probs=185.5
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~ 112 (595)
...++||||| .+++... ...|+++++++|+.++++...... ...+..+.|||||+.|+|.....
T Consensus 18 ~~~~~~s~dg-~~~~~~~----------d~~i~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~SpDg~~la~~~~~~---- 81 (719)
T 1z68_A 18 TFFPNWISGQ-EYLHQSA----------DNNIVLYNIETGQSYTILSNRTMK-SVNASNYGLSPDRQFVYLESDYS---- 81 (719)
T ss_dssp CCCCEESSSS-EEEEECT----------TSCEEEEESSSCCEEEEECHHHHH-TTTCSEEEECTTSSEEEEEEEEE----
T ss_pred CCccEECCCC-eEEEEcC----------CCCEEEEEcCCCcEEEEEcccccc-ccceeeEEECCCCCeEEEEecCc----
Confidence 3478999999 4555431 357999999999988886533200 00256899999999999963210
Q ss_pred CCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe---eecCCCCeeeeeEECCCCCe
Q 007620 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTPAVYTAVEPSPDQKY 188 (595)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~---~~lt~~~~~~~~~~SpDg~~ 188 (595)
+ .+ .+. ....|+++|+ +|+. ++|.. ....++|||||++
T Consensus 82 -----------------~------~~------~~s-------~~~~i~~~d~~~g~~~~~~~l~~--~~~~~~~SPDG~~ 123 (719)
T 1z68_A 82 -----------------K------LW------RYS-------YTATYYIYDLSNGEFVRGNELPR--PIQYLCWSPVGSK 123 (719)
T ss_dssp -----------------E------CS------SSC-------EEEEEEEEETTTTEECCSSCCCS--SBCCEEECSSTTC
T ss_pred -----------------e------eE------Eee-------cceEEEEEECCCCccccceecCc--ccccceECCCCCE
Confidence 0 00 000 1357899999 5566 56642 3457899999999
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccc---------cCCCCceeecCCCeeEEE
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR---------EGMRSISWRADKPSTLYW 259 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~wspdg~~~l~~ 259 (595)
|+|+.. ..|+++++.+++.++++...... ..+++.. .....+.|||||+. |++
T Consensus 124 la~~~~--------------~~i~~~~~~~g~~~~l~~~~~~~---~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~-la~ 185 (719)
T 1z68_A 124 LAYVYQ--------------NNIYLKQRPGDPPFQITFNGREN---KIFNGIPDWVYEEEMLATKYALWWSPNGKF-LAY 185 (719)
T ss_dssp EEEEET--------------TEEEEESSTTSCCEECCCCCBTT---TEEESSCCHHHHHHTTCSSCCEEECTTSSE-EEE
T ss_pred EEEEEC--------------CeEEEEeCCCCCcEEEecCCCcC---CeEcccccceeeeecccCcccEEECCCCCE-EEE
Confidence 999853 27999999888777765322110 0000100 00136899999985 666
Q ss_pred EEeecCCCccc----------------------ccCCcceEEeccCCCCCCCCce---ecc------ccCccccceeecC
Q 007620 260 VEAQDRGDANV----------------------EVSPRDIIYTQPAEPAEGEKPE---ILH------KLDLRFRSVSWCD 308 (595)
Q Consensus 260 ~~~~d~~~~~~----------------------~~~~~~~~~~~d~~~~~g~~~~---~l~------~~~~~~~~~~wsp 308 (595)
....+...... .......++++|+ ++++.. .+. .....+..+.|||
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp 262 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT---TYPAYVGPQEVPVPAMIASSDYYFSWLTWVT 262 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES---SCHHHHCCEECCCCHHHHTSCEEEEEEEESS
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC---CCCCccceeEccCCccCCCCcceEEEeEEeC
Confidence 53322110000 0011236777786 444431 221 2233457899999
Q ss_pred CCcEEEEEEeecccceEEEEEe----CCCCCCCcEEEee----cccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccE
Q 007620 309 DSLALVNETWYKTSQTRTWLVC----PGSKDVAPRVLFD----RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 380 (595)
Q Consensus 309 Dg~~l~~~~~~~~~~~~L~~~d----~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~ 380 (595)
|++.++...........|+++| +.++ +.+.++. ..-. .+.......+.|+|||+.+++...... ....
T Consensus 263 D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g--~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~-g~~~ 338 (719)
T 1z68_A 263 DERVCLQWLKRVQNVSVLSICDFREDWQTW--DCPKTQEHIEESRTG-WAGGFFVSTPVFSYDAISYYKIFSDKD-GYKH 338 (719)
T ss_dssp SSEEEEEEEESSTTEEEEEEEEECSSSSSE--ECCGGGEEEEECSSS-CSSSSSCCCCEECTTSSCEEEEEECTT-SCEE
T ss_pred CCeEEEEEeccccCeEEEEEEcccCCCCCC--ceEEEEecccccCCc-eEccccCCccEECCCCCeEEEEEEccC-CceE
Confidence 9865444322223446899999 7763 3333331 1110 000000002789999998877543221 1223
Q ss_pred EEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEEec---CCCcceEEEE
Q 007620 381 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES---KTEITQYHIL 457 (595)
Q Consensus 381 l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s---~~~p~~l~~~ 457 (595)
|+ .+|+.+++.+.|+.... .+.. ..++ +++.+++.... ...-..||.+
T Consensus 339 l~----------------~~~~~~~~~~~lt~~~~-----~v~~-------~~~~-d~~~i~~~~~~~~~~~~~~~l~~~ 389 (719)
T 1z68_A 339 IH----------------YIKDTVENAIQITSGKW-----EAIN-------IFRV-TQDSLFYSSNEFEEYPGRRNIYRI 389 (719)
T ss_dssp EE----------------EESSCSTTCEECSCSSS-----CEEE-------EEEE-CSSEEEEEESCGGGCTTCBEEEEE
T ss_pred EE----------------EEECCCCceEecccCce-----EEEE-------EEEE-eCCEEEEEEecCCCCCceEEEEEE
Confidence 43 46776676666653221 1111 1245 78888888754 1234568888
Q ss_pred eCCCC--ceeeEec
Q 007620 458 SWPLK--KSSQITN 469 (595)
Q Consensus 458 d~~~~--~~~~Lt~ 469 (595)
++.++ +.++|+.
T Consensus 390 ~~~~g~~~~~~l~~ 403 (719)
T 1z68_A 390 SIGSYPPSKKCVTC 403 (719)
T ss_dssp ECSSSSCCEEESST
T ss_pred eCCCCCCCceeccC
Confidence 87555 3466663
No 26
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.70 E-value=3.4e-15 Score=153.69 Aligned_cols=291 Identities=13% Similarity=0.078 Sum_probs=169.4
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
..||++|+. +++.++++.... .....+.|||||++|||++.. .+||++++++++.++++....
T Consensus 60 ~~l~~~d~~----~~~~~~l~~~~~-~~~~~~~~spdg~~l~~~~~~----------~~l~~~d~~~~~~~~~~~~~~-- 122 (396)
T 3c5m_A 60 RNYYLLNLE----TQQAVQLTEGKG-DNTFGGFISTDERAFFYVKNE----------LNLMKVDLETLEEQVIYTVDE-- 122 (396)
T ss_dssp CEEEEEETT----TTEEEECCCSSC-BCTTTCEECTTSSEEEEEETT----------TEEEEEETTTCCEEEEEECCT--
T ss_pred ceEEEEECC----CCcEEEeecCCC-CccccceECCCCCEEEEEEcC----------CcEEEEECCCCCcEEEEeccc--
Confidence 479999997 888888874222 123348999999999998742 379999999999888865432
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
.|+++|+.|+|........... ....+ ..+++. ..+... . .. ....+|+++|+
T Consensus 123 --------~~~~~g~~l~~~~~~~~~~~~~-----~~~~~--spdg~~---~~~~~~-~--~~------~~~~~l~~~d~ 175 (396)
T 3c5m_A 123 --------EWKGYGTWVANSDCTKLVGIEI-----LKRDW--QPLTSW---EKFAEF-Y--HT------NPTCRLIKVDI 175 (396)
T ss_dssp --------TEEEEEEEEECTTSSEEEEEEE-----EGGGC--CCCCSH---HHHHHH-H--HT------CCCEEEEEEET
T ss_pred --------ccCCCCCEEEeccCCccccccc-----ccccc--CCCCcc---eeeeee-c--cC------CCcceEEEEEC
Confidence 2899999888852110000000 00000 000100 000000 0 00 02468999999
Q ss_pred -CCCeeecCCC-CeeeeeEECC-CCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccc
Q 007620 165 -DGTAKDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (595)
Q Consensus 165 -~g~~~~lt~~-~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~ 241 (595)
+|+.+.++.. .....+.||| ||++|+|... .+.. .....|+++|++++..+.+......
T Consensus 176 ~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~-~~~~------~~~~~l~~~d~~~~~~~~l~~~~~~----------- 237 (396)
T 3c5m_A 176 ETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE-GPHD------LVDARMWLVNEDGSNVRKIKEHAEG----------- 237 (396)
T ss_dssp TTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC-SCSS------SCSCCCEEEETTSCCCEESSCCCTT-----------
T ss_pred CCCcEEeeccCCcccccceECCCCCCEEEEEec-CCCC------CCCceEEEEECCCCceeEeeccCCC-----------
Confidence 5677766543 2456789999 8999999874 2210 0124799999988876666542100
Q ss_pred cCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecC-CCcEEEEEEee-
Q 007620 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD-DSLALVNETWY- 319 (595)
Q Consensus 242 ~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wsp-Dg~~l~~~~~~- 319 (595)
.....+.|+|||+. |++....++. ....++++++ .+++.+.+...... . +.|+| ||+.+++....
T Consensus 238 ~~~~~~~~spdg~~-l~~~~~~~~~-------~~~~l~~~d~---~~g~~~~l~~~~~~-~-~~~s~~dg~~l~~~~~~~ 304 (396)
T 3c5m_A 238 ESCTHEFWIPDGSA-MAYVSYFKGQ-------TDRVIYKANP---ETLENEEVMVMPPC-S-HLMSNFDGSLMVGDGCDA 304 (396)
T ss_dssp EEEEEEEECTTSSC-EEEEEEETTT-------CCEEEEEECT---TTCCEEEEEECCSE-E-EEEECSSSSEEEEEECCC
T ss_pred ccccceEECCCCCE-EEEEecCCCC-------ccceEEEEEC---CCCCeEEeeeCCCC-C-CCccCCCCceEEEecCCc
Confidence 01234789999985 5555322110 1124888886 55566666543332 2 89999 99977664310
Q ss_pred -----------cccceEEEEEeCCCCCCCcEEEeeccccc-c---cCCCCCCCeeeCCCCCEEEEEee
Q 007620 320 -----------KTSQTRTWLVCPGSKDVAPRVLFDRVFEN-V---YSDPGSPMMTRTSTGTNVIAKIK 372 (595)
Q Consensus 320 -----------~~~~~~L~~~d~~~~~~~~~~l~~~~~~~-~---~~~~~~~~~~~~~dg~~l~~~~~ 372 (595)
..+...||++|++++ +.+.|....... . ........+.|++||+.|++...
T Consensus 305 p~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 305 PVDVADADSYNIENDPFLYVLNTKAK--SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp ----------CCCCCCEEEEEETTTT--BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred ceeeccccccccCCCCcEEEEecccC--ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 113458999999884 445554322100 0 00000112789999999988764
No 27
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.68 E-value=2.7e-14 Score=166.22 Aligned_cols=248 Identities=10% Similarity=-0.009 Sum_probs=164.9
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc-
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI- 83 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~- 83 (595)
..||..++. ++..++++... ....+.|||||++|||.. ...||++++.++....+......
T Consensus 226 ~~l~~~~~~----g~~~~~l~~~~---~~~~~~~SpDG~~la~~~-----------~~~i~~~d~~~~~l~~l~~~~~~~ 287 (1045)
T 1k32_A 226 GQIYSTDLD----GKDLRKHTSFT---DYYPRHLNTDGRRILFSK-----------GGSIYIFNPDTEKIEKIEIGDLES 287 (1045)
T ss_dssp CEEEEEETT----SCSCEECCCCC---SSCEEEEEESSSCEEEEE-----------TTEEEEECTTTCCEEECCCCCCCB
T ss_pred eEEEEEeCC----CCcceEecCCC---CcceeeEcCCCCEEEEEe-----------CCEEEEecCCceEeeeeccCcccc
Confidence 367877776 67777887422 356789999999999974 25799999866665555331100
Q ss_pred -----cccccccceEEe-cCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecc
Q 007620 84 -----CLNAVFGSFVWV-NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (595)
Q Consensus 84 -----~~~~~~~~~~Ws-pdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (595)
.....+..+.|| |||+.|++.. ..
T Consensus 288 ~~~~~~~~~~v~~~~~S~pdG~~la~~~--------------------------------------------------~~ 317 (1045)
T 1k32_A 288 PEDRIISIPSKFAEDFSPLDGDLIAFVS--------------------------------------------------RG 317 (1045)
T ss_dssp CCSEEEECGGGGEEEEEECGGGCEEEEE--------------------------------------------------TT
T ss_pred cccccccccccceeeecCCCCCEEEEEE--------------------------------------------------cC
Confidence 001135689999 9999998862 12
Q ss_pred eEEEEcC-CCCeeecCCC-C-eeeeeEECCCCCeEEEEEcccCccccccCcccceeEE-EEcCCCceEEEeccCCCCccC
Q 007620 158 QLVLGSL-DGTAKDFGTP-A-VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQ-VWTTDGKLVRELCDLPPAEDI 233 (595)
Q Consensus 158 ~l~~~d~-~g~~~~lt~~-~-~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~-~~d~~g~~~~~l~~~~~~~~~ 233 (595)
.|+++++ .++.+.++.. . ....++|| ||+.|++.+. . ..++ ++++.+++.+.+....
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-~------------~~l~~~~d~~~~~~~~l~~~~----- 378 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-E------------GDFLGIYDYRTGKAEKFEENL----- 378 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-T------------EEEEEEEETTTCCEEECCCCC-----
T ss_pred EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-C------------CceEEEEECCCCCceEecCCc-----
Confidence 4666777 4466666543 3 45688999 9999998874 1 3788 9999988777765211
Q ss_pred CccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecc-ccCccccceeecCCCcE
Q 007620 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFRSVSWCDDSLA 312 (595)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~-~~~~~~~~~~wspDg~~ 312 (595)
.....+.|+|||+. |++. ..+..++++|+ .+++.+.+. .....+..+.|||||+.
T Consensus 379 --------~~~~~~~~SpDG~~-la~~------------~~~~~v~~~d~---~tg~~~~~~~~~~~~v~~~~~SpDG~~ 434 (1045)
T 1k32_A 379 --------GNVFAMGVDRNGKF-AVVA------------NDRFEIMTVDL---ETGKPTVIERSREAMITDFTISDNSRF 434 (1045)
T ss_dssp --------CSEEEEEECTTSSE-EEEE------------ETTSEEEEEET---TTCCEEEEEECSSSCCCCEEECTTSCE
T ss_pred --------cceeeeEECCCCCE-EEEE------------CCCCeEEEEEC---CCCceEEeccCCCCCccceEECCCCCe
Confidence 11235899999984 5443 12346788886 555666665 34455678999999998
Q ss_pred EEEEEeec------ccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007620 313 LVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (595)
Q Consensus 313 l~~~~~~~------~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 372 (595)
|++..... .....|+++|++++ +.+.+....... ..+.|++||+.|++...
T Consensus 435 la~~~~~~~~~~~~~~~~~i~l~d~~~g--~~~~l~~~~~~~-------~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 435 IAYGFPLKHGETDGYVMQAIHVYDMEGR--KIFAATTENSHD-------YAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEEEECSSTTCSCCEEEEEEEETTTT--EEEECSCSSSBE-------EEEEECTTSCEEEEEES
T ss_pred EEEEecCccccccCCCCCeEEEEECCCC--cEEEeeCCCccc-------CCceEcCCCCEEEEEec
Confidence 77764322 23458999999883 444454322111 01789999999998764
No 28
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.68 E-value=6.5e-15 Score=162.86 Aligned_cols=293 Identities=14% Similarity=0.103 Sum_probs=176.5
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCccc---------ceEEc--cCCCE-EEEEEecccccccCCCceEEEEEECC--
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKIN---------FVSWS--PDGKR-IAFSVRVDEEDNVSSCKLRVWIADAE-- 70 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~---------~~~~S--PDG~~-laf~~~~~~~~~~~~~~~~L~v~d~~-- 70 (595)
..||++ .. +|+.++|+... ..+. .+.|| |||++ |||+.. ...+||++++.
T Consensus 49 ~~l~~~-~~----~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~---------~~~~l~~~~~~~~ 112 (662)
T 3azo_A 49 ATLVRR-RA----DGAEESALPAP--WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF---------GDQRLYAFEPDAP 112 (662)
T ss_dssp EEEEEE-CT----TSCEEESSCTT--CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT---------TTCCEEEECTTST
T ss_pred EEEEEE-CC----CCCcceeCCCC--ccccccccccCCccceeeeecCCCeEEEEEEC---------CCCeEEEEcCCCC
Confidence 457766 33 78888888433 2233 56676 99999 999763 24789999998
Q ss_pred C-CceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCcc
Q 007620 71 T-GEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDES 149 (595)
Q Consensus 71 ~-g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 149 (595)
+ ++.++|+..........+..+.|||||+.|++...+.... + ..
T Consensus 113 g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~------------------~----------------~~- 157 (662)
T 3azo_A 113 GGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGE------------------G----------------PS- 157 (662)
T ss_dssp TCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSS------------------S----------------TT-
T ss_pred CCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCC------------------C----------------CC-
Confidence 6 8889998643100011356899999999999974210000 0 00
Q ss_pred ceEEeecceEEEEcC-C------CCeeecC-CC-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC-Cc
Q 007620 150 LFDYYTTAQLVLGSL-D------GTAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GK 219 (595)
Q Consensus 150 ~~~~~~~~~l~~~d~-~------g~~~~lt-~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~ 219 (595)
....+|+++++ . ++.++|+ .. .....++|||||++|++.+...+. .++ ...+|+++|++ ++
T Consensus 158 ----~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~---~~~--~~~~i~~~d~~~~g 228 (662)
T 3azo_A 158 ----DVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPR---MPW--EGTELKTARVTEDG 228 (662)
T ss_dssp ----CEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTC---CTT--TCEEEEEEEECTTS
T ss_pred ----CceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCC---CCC--CCcEEEEEEECCCC
Confidence 02468999999 4 5677787 54 355688999999999998754321 111 13589999998 46
Q ss_pred ---eEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccc
Q 007620 220 ---LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK 296 (595)
Q Consensus 220 ---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~ 296 (595)
+.+.+..... .....+.|+|||+ +++....+ ....++++++ ++++.+.++.
T Consensus 229 ~~~~~~~l~~~~~------------~~~~~~~~spdg~--l~~~~~~~---------~~~~l~~~~~---~~~~~~~l~~ 282 (662)
T 3azo_A 229 RFADTRTLLGGPE------------EAIAQAEWAPDGS--LIVATDRT---------GWWNLHRVDP---ATGAATQLCR 282 (662)
T ss_dssp CEEEEEEEEEETT------------BCEEEEEECTTSC--EEEEECTT---------SSCEEEEECT---TTCCEEESSC
T ss_pred cccccEEeCCCCC------------ceEcceEECCCCe--EEEEECCC---------CCeEEEEEEC---CCCceeeccc
Confidence 5555543210 1124588999998 55542111 1226788785 4567777765
Q ss_pred cCccccc---------eeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEE
Q 007620 297 LDLRFRS---------VSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNV 367 (595)
Q Consensus 297 ~~~~~~~---------~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l 367 (595)
....... +.|+||+..++... + +..+||.+|++++ +.+.|..... . +. ..|+++|+.+
T Consensus 283 ~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~--~-~~~~l~~~d~~~~--~~~~l~~~~~-~-~~------~~~s~~~~~~ 349 (662)
T 3azo_A 283 REEEFAGPLWTPGMRWFAPLANGLIAVVHG--K-GAAVLGILDPESG--ELVDAAGPWT-E-WA------ATLTVSGTRA 349 (662)
T ss_dssp CSSBSSCCCCSTTCCSEEECTTSCEEEEEB--S-SSCEEEEEETTTT--EEEECCSSCC-E-EE------EEEEEETTEE
T ss_pred ccccccCccccccCceEeEeCCCEEEEEEE--c-CccEEEEEECCCC--cEEEecCCCC-e-EE------EEEecCCCEE
Confidence 4433333 44556666544432 3 5669999999873 4454432111 0 00 1125677777
Q ss_pred EEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeec
Q 007620 368 IAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 413 (595)
Q Consensus 368 ~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (595)
++...... ....+ +.+|+++++.+.|+..
T Consensus 350 ~~~~~~~~-~~~~i----------------~~~d~~~g~~~~l~~~ 378 (662)
T 3azo_A 350 VGVAASPR-TAYEV----------------VELDTVTGRARTIGAR 378 (662)
T ss_dssp EEEEEETT-EEEEE----------------EEEETTTCCEEEEESC
T ss_pred EEEEcCCC-CCCEE----------------EEEECCCCceEEeecC
Confidence 66654321 11233 3567777777777543
No 29
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=99.66 E-value=1.7e-13 Score=150.06 Aligned_cols=122 Identities=12% Similarity=0.010 Sum_probs=90.1
Q ss_pred ccccCCEEEEEEecCCCcceEEEEeCCCCceeeEecCCCCCCCcCCCceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCC
Q 007620 434 INLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPL 513 (595)
Q Consensus 434 ~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt~~~~~~~~~~~~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~l 513 (595)
.+++++.++++.++...|+++|++++. ++.+.|+..+. ......+.+|.++|++.||.+|+++|++|.++++++++
T Consensus 403 ~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~~-~~~~~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~-- 478 (711)
T 4hvt_A 403 SYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRKALY-SFDSENYVLEQKEATSFDGVKIPYFLVYKKGIKFDGKN-- 478 (711)
T ss_dssp CCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCSS-CCCGGGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCC--
T ss_pred ecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCCc-ccCcccCeeEEEEEECCCCeEEEEEEEecCCCCCCCCc--
Confidence 346778899999999999999999987 78888988753 34444458999999999999999999999998766544
Q ss_pred cEEEEeccCCccCcccCCcccCCCCcccCCCCc--hhHHHhccCeEEEeCCCCceeecCCCCCCchh
Q 007620 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPT--SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRY 578 (595)
Q Consensus 514 P~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~--~~q~la~~GY~Vl~~~~~~~~~~~~~~~~~~~ 578 (595)
|+||++|++ |.......+. ..|+|+++||+|+. +.++ |+.+++..+
T Consensus 479 P~vl~~HGG--------------~~~~~~~~~~~~~~q~la~~Gy~Vv~----~d~R-Gsg~~G~~~ 526 (711)
T 4hvt_A 479 PTLLEAYGG--------------FQVINAPYFSRIKNEVWVKNAGVSVL----ANIR-GGGEFGPEW 526 (711)
T ss_dssp CEEEECCCC--------------TTCCCCCCCCHHHHHHTGGGTCEEEE----ECCT-TSSTTCHHH
T ss_pred cEEEEECCC--------------CCCCCCCcccHHHHHHHHHCCCEEEE----EeCC-CCCCcchhH
Confidence 999997743 3321111222 22699999999999 4444 333444443
No 30
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=1e-13 Score=140.07 Aligned_cols=253 Identities=15% Similarity=0.196 Sum_probs=149.0
Q ss_pred ceeeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCC
Q 007620 3 FFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (595)
Q Consensus 3 ~~~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~ 82 (595)
+...||+.|+. +++.++| ..+..|+|||||++|||++.... .+..+||++++++|+.++++....
T Consensus 41 ~~~~l~~~d~~----~~~~~~l------~~~~~~~~SpDg~~la~~~~~~~-----~~~~~l~~~~~~~g~~~~l~~~~~ 105 (347)
T 2gop_A 41 YENTIVIENLK----NNARRFI------ENATMPRISPDGKKIAFMRANEE-----KKVSEIWVADLETLSSKKILEAKN 105 (347)
T ss_dssp EEEEEEEEETT----TCCEEEE------ESCEEEEECTTSSEEEEEEEETT-----TTEEEEEEEETTTTEEEEEEEESE
T ss_pred ccceEEEEeCC----CCceEEc------ccCCCeEECCCCCEEEEEEeccC-----CCcceEEEEECCCCceEEEEcCCC
Confidence 46789999998 7888777 24778999999999999886421 246789999999999998875431
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEE
Q 007620 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (595)
Q Consensus 83 ~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (595)
+..+.|||||+.|+|........ . ....+.. +.+..++.++......+||++
T Consensus 106 ------~~~~~wspdg~~l~~~~~~~~~~------------------~---~~~~~~~-~~~~~~g~~~~~~~~~~l~~~ 157 (347)
T 2gop_A 106 ------IRSLEWNEDSRKLLIVGFKRRED------------------E---DFIFEDD-VPAWFDDLGFFDGEKTTFWIF 157 (347)
T ss_dssp ------EEEEEECTTSSEEEEEEECCCC-------------------------------CCCC---------CEEEEEEE
T ss_pred ------ccceeECCCCCEEEEEEccCCCc------------------C---CcEEEcc-cceeecCcccccCccceEEEE
Confidence 56899999999999975321000 0 0000100 122222222211234689999
Q ss_pred cC-CCCe-eecCCCCeeeeeEECCCCCeEEEEEcccCccccccCccc-ceeEEEEcCCCceEEEeccCCCCccCCccccc
Q 007620 163 SL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARF-SQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (595)
Q Consensus 163 d~-~g~~-~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~-~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~ 239 (595)
++ +|+. +.|+.+ ....+.||||| |+|+........ ... ..+|+++| +++.+.+... .
T Consensus 158 d~~~~~~~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~~----~~~~~~~l~~~d--~~~~~~l~~~-~---------- 217 (347)
T 2gop_A 158 DTESEEVIEEFEKP-RFSSGIWHRDK--IVVNVPHREIIP----QYFKFWDIYIWE--DGKEEKMFEK-V---------- 217 (347)
T ss_dssp ETTTTEEEEEEEEE-TTCEEEEETTE--EEEEEECCCSSC----CSSCCEEEEEEE--TTEEEEEEEE-E----------
T ss_pred ECCCCeEEeeecCC-CcccccCCCCe--EEEEEecccccc----cccccccEEEeC--CCceEEeccC-c----------
Confidence 99 5666 677653 44578999999 677654321100 001 34788999 6666666432 1
Q ss_pred cccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecccc-Cccccc-eeecCCCcEEEEEE
Q 007620 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRS-VSWCDDSLALVNET 317 (595)
Q Consensus 240 ~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~-~~~~~~-~~wspDg~~l~~~~ 317 (595)
....++|||+. |++........ ......+++++ + ++.+.++.. ...+.. +.|+ || . ++..
T Consensus 218 -----~~~~~spdg~~-l~~~~~~~~~~----~~~~~~l~~~d----~-~~~~~l~~~~~~~~~~~~~~s-dg-~-~~~~ 279 (347)
T 2gop_A 218 -----SFYAVDSDGER-ILLYGKPEKKY----MSEHNKLYIYD----G-KEVMGILDEVDRGVGQAKIKD-GK-V-YFTL 279 (347)
T ss_dssp -----SEEEEEECSSC-EEEEECCSSSC----CCSSCEEEEEC----S-SCEEESSTTCCSEEEEEEEET-TE-E-EEEE
T ss_pred -----ceeeECCCCCE-EEEEEccccCC----ccccceEEEEC----C-CceEeccccCCcccCCccEEc-Cc-E-EEEE
Confidence 11334999985 65552211100 01123566655 2 355666543 445565 8999 88 3 3332
Q ss_pred eecccceEEEEEeCCCCCCCcEEEe
Q 007620 318 WYKTSQTRTWLVCPGSKDVAPRVLF 342 (595)
Q Consensus 318 ~~~~~~~~L~~~d~~~~~~~~~~l~ 342 (595)
. ..+..+|| ++ ++ +.+.++
T Consensus 280 ~-~~~~~~l~-~~-~g---~~~~~~ 298 (347)
T 2gop_A 280 F-EEGSVNLY-IW-DG---EIKPIA 298 (347)
T ss_dssp E-ETTEEEEE-EE-SS---SEEEEE
T ss_pred e-cCCcEEEE-Ec-CC---ceEEEe
Confidence 2 23566899 88 43 345554
No 31
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.62 E-value=2.2e-13 Score=151.80 Aligned_cols=276 Identities=10% Similarity=0.064 Sum_probs=163.4
Q ss_pred eeeEEEecCCCCCCCCceeeecC---CCC--CcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEeccc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGY---PDG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~---~~~--~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~ 79 (595)
+.||++++. +++.+.|... ..+ .....++|||||++|||....+. ....+|+++|+++|+..+++.
T Consensus 98 ~~l~~~~~~----~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G-----~~~~~i~v~d~~tg~~~~~~~ 168 (710)
T 2xdw_A 98 RVLYVQDSL----EGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASG-----SDWVTIKFMKVDGAKELPDVL 168 (710)
T ss_dssp CEEEEESST----TSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETT-----CSCEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEcCC----CCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCC-----CceEEEEEEECCCCCCCcccc
Confidence 468888876 6666666421 111 14678999999999999987531 223599999999999877643
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceE
Q 007620 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (595)
Q Consensus 80 ~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (595)
... .+..+.|||||+.|+|......... ..+. . . .. ....+|
T Consensus 169 ~~~-----~~~~~~wspDg~~l~~~~~~~~~~~---------------~~~~------~-------~-~~----~~~~~v 210 (710)
T 2xdw_A 169 ERV-----KFSCMAWTHDGKGMFYNAYPQQDGK---------------SDGT------E-------T-ST----NLHQKL 210 (710)
T ss_dssp EEE-----CSCCEEECTTSSEEEEEECCCCSSC---------------CSSS------C-------C-CC----CCCCEE
T ss_pred cCc-----ccceEEEEeCCCEEEEEEECCcccc---------------cccc------c-------c-cc----CCCCEE
Confidence 221 3568999999999999754321100 0000 0 0 00 024678
Q ss_pred EEEcC-CCCe--eec-CC---CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC------c--eEEEe
Q 007620 160 VLGSL-DGTA--KDF-GT---PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------K--LVREL 224 (595)
Q Consensus 160 ~~~d~-~g~~--~~l-t~---~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g------~--~~~~l 224 (595)
|++++ +++. +.+ .. +.....+.|||||++|++....... ...+|+++|+.+ + ..+.|
T Consensus 211 ~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~--------~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 211 YYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD--------PVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS--------SCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred EEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC--------CccEEEEEECcccccccCCccceEEe
Confidence 99998 4432 333 22 2245688999999999998753210 135899999875 4 34555
Q ss_pred ccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCC---ceeccccCc--
Q 007620 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHKLDL-- 299 (595)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~---~~~l~~~~~-- 299 (595)
.... ......|++||+. |++....+ .....|+++++ .+++ .+.|+....
T Consensus 283 ~~~~--------------~~~~~~~s~dg~~-l~~~s~~~--------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~ 336 (710)
T 2xdw_A 283 IDNF--------------EGEYDYVTNEGTV-FTFKTNRH--------SPNYRLINIDF---TDPEESKWKVLVPEHEKD 336 (710)
T ss_dssp ECSS--------------SSCEEEEEEETTE-EEEEECTT--------CTTCEEEEEET---TSCCGGGCEEEECCCSSC
T ss_pred eCCC--------------CcEEEEEeccCCE-EEEEECCC--------CCCCEEEEEeC---CCCCcccceeccCCCCCC
Confidence 4321 0112458899874 65552111 11246777786 4333 255554322
Q ss_pred cccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEe-e-cccccccCCCCCCCeeeCCCCCEEEEEeee
Q 007620 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF-D-RVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (595)
Q Consensus 300 ~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~ 373 (595)
.+..+.|++++..++... +.+..+|+++++.++ ...+.|. . ..+.. +.++++++.+++....
T Consensus 337 ~~~~~~~~~~~~lv~~~~--~~g~~~l~~~~~~~g-~~~~~l~~~~~~v~~---------~~~s~d~~~l~~~~ss 400 (710)
T 2xdw_A 337 VLEWVACVRSNFLVLCYL--HDVKNTLQLHDLATG-ALLKIFPLEVGSVVG---------YSGQKKDTEIFYQFTS 400 (710)
T ss_dssp EEEEEEEETTTEEEEEEE--ETTEEEEEEEETTTC-CEEEEECCCSSEEEE---------EECCTTCSEEEEEEEC
T ss_pred eEEEEEEEcCCEEEEEEE--ECCEEEEEEEECCCC-CEEEecCCCCceEEE---------EecCCCCCEEEEEEeC
Confidence 456788886655443322 245668999998553 2234442 1 11111 6678899888877643
No 32
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=4.6e-13 Score=148.88 Aligned_cols=294 Identities=12% Similarity=0.067 Sum_probs=171.7
Q ss_pred eeeEEEecCCCCCCCCceeeecCCC---C--CcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEeccc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPD---G--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~---~--~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~ 79 (595)
..||+++.. +|++++|+.... + ..+..++|||||++|||...... ....+|+++|+++|+..+...
T Consensus 94 ~~l~~~~~~----~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G-----~~~~~i~v~dl~tg~~~~~~~ 164 (695)
T 2bkl_A 94 AILYWRQGE----SGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNA-----ADEAVLHVIDVDSGEWSKVDV 164 (695)
T ss_dssp CEEEEEEST----TSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETT-----CSCCEEEEEETTTCCBCSSCC
T ss_pred EEEEEEcCC----CCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCC-----CceEEEEEEECCCCCCcCCcc
Confidence 468988876 778888874221 1 14778999999999999987631 234799999999998652211
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceE
Q 007620 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (595)
Q Consensus 80 ~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (595)
.... ....+.|||||+.|+|...+.... +.. .+ . ....+|
T Consensus 165 ~~~~----~~~~~~wspDg~~l~~~~~d~~~~------------------~~~------~~-------~-----~~~~~v 204 (695)
T 2bkl_A 165 IEGG----KYATPKWTPDSKGFYYEWLPTDPS------------------IKV------DE-------R-----PGYTTI 204 (695)
T ss_dssp BSCC----TTCCCEECTTSSEEEEEECCCCTT------------------SCG------GG-------G-----GGGCEE
T ss_pred cCcc----cccceEEecCCCEEEEEEecCCCC------------------Ccc------cc-------C-----CCCCEE
Confidence 1211 236899999999999975432100 000 00 0 024679
Q ss_pred EEEcC-CCC--eeecCCC----CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCcc
Q 007620 160 VLGSL-DGT--AKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (595)
Q Consensus 160 ~~~d~-~g~--~~~lt~~----~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~ 232 (595)
|++++ ++. .+.+... .....+.|||||++|++.+.... ...+|++++..++..+.|.....
T Consensus 205 ~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~---------~~~~l~~~~~~~~~~~~l~~~~~--- 272 (695)
T 2bkl_A 205 RYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW---------SENDVYWKRPGEKDFRLLVKGVG--- 272 (695)
T ss_dssp EEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT---------TEEEEEEECTTCSSCEEEEECSS---
T ss_pred EEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC---------CceEEEEEcCCCCceEEeecCCC---
Confidence 99998 454 2344322 24568899999999999875431 13589999887666666653211
Q ss_pred CCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc---eecccc--Cccccceeec
Q 007620 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKL--DLRFRSVSWC 307 (595)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~---~~l~~~--~~~~~~~~ws 307 (595)
....+.| ++|+ +++....+ .....|+++++ ++++. +.+... ...+..+.|+
T Consensus 273 ----------~~~~~~~-~~g~--l~~~s~~~--------~~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 273 ----------AKYEVHA-WKDR--FYVLTDEG--------APRQRVFEVDP---AKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp ----------CCEEEEE-ETTE--EEEEECTT--------CTTCEEEEEBT---TBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred ----------ceEEEEe-cCCc--EEEEECCC--------CCCCEEEEEeC---CCCCccCCeEEecCCCCCeEEEEEEE
Confidence 1122444 6765 55442111 12346777786 43442 455533 2335567777
Q ss_pred CCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCC
Q 007620 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG 387 (595)
Q Consensus 308 pDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g 387 (595)
++..++... +.+..+||.+++++ +..+.+.-.... .. ..+.+++||+.+++......+++ .+|
T Consensus 329 -~~~lv~~~~--~dg~~~l~~~~~~g--~~~~~l~~~~~~-~v-----~~~~~s~d~~~l~~~~ss~~~P~-~v~----- 391 (695)
T 2bkl_A 329 -GGHLSLEYL--KDATSEVRVATLKG--KPVRTVQLPGVG-AA-----SNLMGLEDLDDAYYVFTSFTTPR-QIY----- 391 (695)
T ss_dssp -TTEEEEEEE--ETTEEEEEEEETTC--CEEEECCCSSSS-EE-----CCCBSCTTCSEEEEEEEETTEEE-EEE-----
T ss_pred -CCEEEEEEE--ECCEEEEEEEeCCC--CeeEEecCCCCe-EE-----EEeecCCCCCEEEEEEcCCCCCC-EEE-----
Confidence 444333322 34567899999876 333333211010 00 11677889998887765422222 233
Q ss_pred CCCCCCcceeEeeecCCCceeeee
Q 007620 388 FTPEGNIPFLDLFDINTGSKERIW 411 (595)
Q Consensus 388 ~~~~~~~~~l~~~d~~~g~~~~l~ 411 (595)
.+|+.+++.+.+.
T Consensus 392 -----------~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 392 -----------KTSVSTGKSELWA 404 (695)
T ss_dssp -----------EEETTTCCEEEEE
T ss_pred -----------EEECCCCcEEEEe
Confidence 4677777765554
No 33
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.57 E-value=2e-11 Score=125.19 Aligned_cols=247 Identities=13% Similarity=0.050 Sum_probs=156.1
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
..|++.|+. +++...... ....+..+.|||||++|++.... ...|+++|+.+++.........
T Consensus 12 ~~v~v~d~~----~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~---------d~~i~v~d~~~~~~~~~~~~~~-- 74 (391)
T 1l0q_A 12 DNISVIDVT----SNKVTATIP--VGSNPMGAVISPDGTKVYVANAH---------SNDVSIIDTATNNVIATVPAGS-- 74 (391)
T ss_dssp TEEEEEETT----TTEEEEEEE--CSSSEEEEEECTTSSEEEEEEGG---------GTEEEEEETTTTEEEEEEECSS--
T ss_pred CEEEEEECC----CCeEEEEee--cCCCcceEEECCCCCEEEEECCC---------CCeEEEEECCCCeEEEEEECCC--
Confidence 358899997 666554432 33357889999999998776532 3678999999888665544333
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
.+..+.|+|||+.|++.... ...|+++|+
T Consensus 75 ---~v~~~~~spdg~~l~~~~~~------------------------------------------------~~~v~v~d~ 103 (391)
T 1l0q_A 75 ---SPQGVAVSPDGKQVYVTNMA------------------------------------------------SSTLSVIDT 103 (391)
T ss_dssp ---SEEEEEECTTSSEEEEEETT------------------------------------------------TTEEEEEET
T ss_pred ---CccceEECCCCCEEEEEECC------------------------------------------------CCEEEEEEC
Confidence 46789999999998876210 134667777
Q ss_pred -CCCee-ecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccccccc
Q 007620 165 -DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (595)
Q Consensus 165 -~g~~~-~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~ 242 (595)
+++.. .+........++|+|||++|+++... ...|++||+.+++........ .
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~v~~~d~~~~~~~~~~~~~-------------~ 158 (391)
T 1l0q_A 104 TSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG------------DKTVSVINTVTKAVINTVSVG-------------R 158 (391)
T ss_dssp TTTEEEEEEECSSSEEEEEECTTSSEEEEEETT------------TTEEEEEETTTTEEEEEEECC-------------S
T ss_pred CCCeEEEEEeCCCCcceEEECCCCCEEEEEeCC------------CCEEEEEECCCCcEEEEEecC-------------C
Confidence 44433 23333345688999999999877643 237999998876554332211 1
Q ss_pred CCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeeccc
Q 007620 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS 322 (595)
Q Consensus 243 ~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~ 322 (595)
....+.|+|||+. |+... .....++++|+ ..++.............+.|+|||..++.... +..
T Consensus 159 ~~~~~~~~~dg~~-l~~~~-----------~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-~~~ 222 (391)
T 1l0q_A 159 SPKGIAVTPDGTK-VYVAN-----------FDSMSISVIDT---VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNV-DKY 222 (391)
T ss_dssp SEEEEEECTTSSE-EEEEE-----------TTTTEEEEEET---TTTEEEEEEECSSEEEEEEECTTSSEEEEEEE-CSS
T ss_pred CcceEEECCCCCE-EEEEe-----------CCCCEEEEEEC---CCCeEEEEEecCCCccceEECCCCCEEEEEec-CcC
Confidence 1235789999974 43321 11246777786 43344433333445667899999987665432 112
Q ss_pred ceEEEEEeCCCCCCCcEEEeec--ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 323 QTRTWLVCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 323 ~~~L~~~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
...|+++|+.++ +....... .... +.|+++|+.+++..
T Consensus 223 ~~~v~~~d~~~~--~~~~~~~~~~~~~~---------~~~s~dg~~l~~s~ 262 (391)
T 1l0q_A 223 FNTVSMIDTGTN--KITARIPVGPDPAG---------IAVTPDGKKVYVAL 262 (391)
T ss_dssp CCEEEEEETTTT--EEEEEEECCSSEEE---------EEECTTSSEEEEEE
T ss_pred CCcEEEEECCCC--eEEEEEecCCCccE---------EEEccCCCEEEEEc
Confidence 347889998873 22222221 1222 78999999887765
No 34
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=8.7e-13 Score=129.08 Aligned_cols=223 Identities=14% Similarity=0.084 Sum_probs=149.1
Q ss_pred eeeEEEecCCCCCC-CCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc
Q 007620 5 TGIGIHRLLPDDSL-GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (595)
Q Consensus 5 ~~~~~~~~~~~~~~-g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~ 83 (595)
..|+++|+. + ++.+++........+..++|||||++|++..... ++..+||++++.+++.++++...
T Consensus 62 ~~i~~~d~~----~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~-- 129 (297)
T 2ojh_A 62 GLLYRLSLA----GDPSPEKVDTGFATICNNDHGISPDGALYAISDKVE------FGKSAIYLLPSTGGTPRLMTKNL-- 129 (297)
T ss_dssp TEEEEEESS----SCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTT------TSSCEEEEEETTCCCCEECCSSS--
T ss_pred CeEEEEeCC----CCCCceEeccccccccccceEECCCCCEEEEEEeCC------CCcceEEEEECCCCceEEeecCC--
Confidence 368999997 6 7777776433334578899999999999987431 34689999999988888875443
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEc
Q 007620 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 163 (595)
....+.|+|||+.|++.... + ...+||.++
T Consensus 130 ----~~~~~~~spdg~~l~~~~~~---------------------------------------~-------~~~~l~~~~ 159 (297)
T 2ojh_A 130 ----PSYWHGWSPDGKSFTYCGIR---------------------------------------D-------QVFDIYSMD 159 (297)
T ss_dssp ----SEEEEEECTTSSEEEEEEEE---------------------------------------T-------TEEEEEEEE
T ss_pred ----CccceEECCCCCEEEEEECC---------------------------------------C-------CceEEEEEE
Confidence 24578999999999886310 0 123688888
Q ss_pred C-CCCeeecCCC-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccc
Q 007620 164 L-DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (595)
Q Consensus 164 ~-~g~~~~lt~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~ 241 (595)
+ .++.+.+... .....+.|||||++|++...... ...+|.++..++..+.+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~----------~~~i~~~~~~~~~~~~~~~~~------------- 216 (297)
T 2ojh_A 160 IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTG----------QMQIWRVRVDGSSVERITDSA------------- 216 (297)
T ss_dssp TTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSCEEECCCCS-------------
T ss_pred CCCCcceEcccCCCccccceECCCCCEEEEEecCCC----------CccEEEECCCCCCcEEEecCC-------------
Confidence 8 4566666544 34568999999999998864322 347888888777777665332
Q ss_pred cCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccc---cCccccceeecCCCcEEEEEE
Q 007620 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK---LDLRFRSVSWCDDSLALVNET 317 (595)
Q Consensus 242 ~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~---~~~~~~~~~wspDg~~l~~~~ 317 (595)
.....+.|+|||+. |++... +.+...........++++++ .+++...+.. ....+..+.|+|||..|++..
T Consensus 217 ~~~~~~~~s~dg~~-l~~~~~-~~~~~~~~~~~~~~l~~~d~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 217 YGDWFPHPSPSGDK-VVFVSY-DADVFDHPRDLDVRVQLMDM---DGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp EEEEEEEECTTSSE-EEEEEE-ETTCCSCCSSEEEEEEEEET---TSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred cccCCeEECCCCCE-EEEEEc-CCCCCcccccCceEEEEEec---CCCCceeeeccCCCCcccccceECCCCCEEEEEE
Confidence 11235789999984 555432 22111000012246888886 5556655543 345677899999999877664
No 35
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=2.1e-11 Score=122.93 Aligned_cols=276 Identities=8% Similarity=-0.007 Sum_probs=161.3
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
....+.|||||++|++....+... .....|+++|+++++......... ....+.|+|||+.|++....
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~---~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~---- 109 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKL---DKGGVVYRLDPVTLEVTQAIHNDL-----KPFGATINNTTQTLWFGNTV---- 109 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTT---EESEEEEEECTTTCCEEEEEEESS-----CCCSEEEETTTTEEEEEETT----
T ss_pred CccceEECCCCCEEEEEcCCCcCC---CCCccEEEEcCCCCeEEEEEecCC-----CcceEEECCCCCEEEEEecC----
Confidence 467889999999986655321000 114789999999988655543322 35688999999988775210
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecCCC----------Ceeee
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP----------AVYTA 179 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt~~----------~~~~~ 179 (595)
...|+++|+ +++. ..+... .....
T Consensus 110 --------------------------------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (353)
T 3vgz_A 110 --------------------------------------------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRE 145 (353)
T ss_dssp --------------------------------------------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEE
T ss_pred --------------------------------------------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCce
Confidence 124556666 4443 222111 11357
Q ss_pred eEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEE
Q 007620 180 VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (595)
Q Consensus 180 ~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~ 259 (595)
+.|||||++|++..... ...|+++|..+++......... .....+.|+|||+. |+.
T Consensus 146 ~~~s~dg~~l~~~~~~~-----------~~~i~~~d~~~~~~~~~~~~~~------------~~~~~~~~s~dg~~-l~~ 201 (353)
T 3vgz_A 146 LVADDATNTVYISGIGK-----------ESVIWVVDGGNIKLKTAIQNTG------------KMSTGLALDSEGKR-LYT 201 (353)
T ss_dssp EEEETTTTEEEEEEESS-----------SCEEEEEETTTTEEEEEECCCC------------TTCCCCEEETTTTE-EEE
T ss_pred EEECCCCCEEEEEecCC-----------CceEEEEcCCCCceEEEecCCC------------CccceEEECCCCCE-EEE
Confidence 89999999988876322 2379999998776544322110 11346889999984 544
Q ss_pred EEeecCCCcccccCCcceEEeccCCCCCCCCceecccc-----CccccceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-----DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 260 ~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~-----~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
. .....++++|. ..++....... ......+.|+|||..++.... ....|+++|+.++
T Consensus 202 ~------------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 202 T------------NADGELITIDT---ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS---KAAEVLVVDTRNG 263 (353)
T ss_dssp E------------CTTSEEEEEET---TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES---SSSEEEEEETTTC
T ss_pred E------------cCCCeEEEEEC---CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC---CCCEEEEEECCCC
Confidence 3 11245667775 33343322211 122345789999987655431 2247999999874
Q ss_pred CCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecC
Q 007620 335 DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (595)
Q Consensus 335 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (595)
+....... .. + ..+.|++||+.+++.... ...+. .+|+.+++........
T Consensus 264 --~~~~~~~~--~~----~--~~~~~s~dg~~l~v~~~~----~~~v~----------------~~d~~~~~~~~~~~~~ 313 (353)
T 3vgz_A 264 --NILAKVAA--PE----S--LAVLFNPARNEAYVTHRQ----AGKVS----------------VIDAKSYKVVKTFDTP 313 (353)
T ss_dssp --CEEEEEEC--SS----C--CCEEEETTTTEEEEEETT----TTEEE----------------EEETTTTEEEEEEECC
T ss_pred --cEEEEEEc--CC----C--ceEEECCCCCEEEEEECC----CCeEE----------------EEECCCCeEEEEEecC
Confidence 32222211 11 1 127899999988876532 22233 4677777654443221
Q ss_pred ccccceeeEEeeeCCCcccccccCCEEEEEEec
Q 007620 415 REKYFETAVALVFGQGEEDINLNQLKILTSKES 447 (595)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s 447 (595)
..+.. ..|++|++.++++...
T Consensus 314 -----~~~~~-------~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 314 -----THPNS-------LALSADGKTLYVSVKQ 334 (353)
T ss_dssp -----SEEEE-------EEECTTSCEEEEEEEC
T ss_pred -----CCCCe-------EEEcCCCCEEEEEEcc
Confidence 11222 3578899988777655
No 36
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.54 E-value=2.4e-13 Score=147.91 Aligned_cols=243 Identities=10% Similarity=0.007 Sum_probs=150.1
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEEC--CCCceEecccCCCc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA--ETGEAKPLFESPDI 83 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~--~~g~~~~lt~~~~~ 83 (595)
+||+ +. +|+.+++|.... ..+..|.|||| +++|++..+.. +...+||++++ +++.. +++....
T Consensus 47 ~lw~--~~----~g~~~~lt~~~~-~~~~~~~~spd--~~l~~~~~~~g----~~~~~l~~~~~~~~g~~~-~l~~~~~- 111 (582)
T 3o4h_A 47 NAYL--YD----GGETVKLNREPI-NSVLDPHYGVG--RVILVRDVSKG----AEQHALFKVNTSRPGEEQ-RLEAVKP- 111 (582)
T ss_dssp EEEE--EE----TTEEEECCSSCC-SEECEECTTCS--EEEEEEECSTT----SCCEEEEEEETTSTTCCE-ECTTSCS-
T ss_pred eEEE--Ec----CCCcEeeecccc-cccccccCCCC--eEEEEeccCCC----CcceEEEEEeccCCCccc-cccCCCC-
Confidence 3555 55 888999985442 25889999999 68887764110 24568999999 65544 6765432
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEc
Q 007620 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 163 (595)
...+.|+|||+.+++.... ...+.++|
T Consensus 112 -----~~~~~~s~dg~~~~~~s~~------------------------------------------------~~~~~l~d 138 (582)
T 3o4h_A 112 -----MRILSGVDTGEAVVFTGAT------------------------------------------------EDRVALYA 138 (582)
T ss_dssp -----BEEEEEEECSSCEEEEEEC------------------------------------------------SSCEEEEE
T ss_pred -----ceeeeeCCCCCeEEEEecC------------------------------------------------CCCceEEE
Confidence 3467999999988876321 01122446
Q ss_pred C-CCCeeecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccccccc
Q 007620 164 L-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (595)
Q Consensus 164 ~-~g~~~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~ 242 (595)
+ +|+.++|+.... ..+.|||||++|++.+..... ...|+++|+++++.+.|+....
T Consensus 139 ~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~---------~~~i~~~d~~~g~~~~l~~~~~------------- 195 (582)
T 3o4h_A 139 LDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGG---------RVSLFTSNLSSGGLRVFDSGEG------------- 195 (582)
T ss_dssp EETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETT---------EEEEEEEETTTCCCEEECCSSC-------------
T ss_pred ccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCC---------CeEEEEEcCCCCCceEeecCCC-------------
Confidence 6 556666654322 578999999999988754321 2479999999888888764421
Q ss_pred CCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCcccccee--------ecCCCcEEE
Q 007620 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVS--------WCDDSLALV 314 (595)
Q Consensus 243 ~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~--------wspDg~~l~ 314 (595)
....+.|||||+. |+ . . +. .....++++|+ ++++.+.+......+..+. ||||| .++
T Consensus 196 ~~~~~~~SpDG~~-l~-~-~-~~-------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~ 260 (582)
T 3o4h_A 196 SFSSASISPGMKV-TA-G-L-ET-------AREARLVTVDP---RDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLA 260 (582)
T ss_dssp EEEEEEECTTSCE-EE-E-E-EC-------SSCEEEEEECT---TTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEE
T ss_pred ccccceECCCCCE-EE-E-c-cC-------CCeeEEEEEcC---CCCcEEEccCCCcChhhhhhccccceeEcCCC-cEE
Confidence 1246899999984 44 2 1 11 11236888886 5566663333444555677 99999 444
Q ss_pred EEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 315 NETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 315 ~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
+.... .+..+||.+ + .. .......+.. +.++ ||+.++...
T Consensus 261 ~~~~~-~g~~~l~~~---g--~~-~~~~~~~v~~---------~~~s-dg~~l~~~s 300 (582)
T 3o4h_A 261 VVARR-EGRSAVFID---G--ER-VEAPQGNHGR---------VVLW-RGKLVTSHT 300 (582)
T ss_dssp EEEEE-TTEEEEEET---T--EE-ECCCSSEEEE---------EEEE-TTEEEEEEE
T ss_pred EEEEc-CCcEEEEEE---C--Ce-eccCCCceEE---------EEec-CCEEEEEEc
Confidence 43322 344566655 4 11 1112222322 6788 887765444
No 37
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=5.9e-12 Score=140.92 Aligned_cols=274 Identities=12% Similarity=0.058 Sum_probs=156.0
Q ss_pred eeeEEEecCCCCCCCCceeeecC---CCC--CcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEeccc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGY---PDG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~---~~~--~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~ 79 (595)
+.||+++.... .+++.++|... ..+ .....++|||||++|||.+.++. ....+||++|+++|+....+.
T Consensus 133 ~~l~~~~~~~~-~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G-----~e~~~i~v~dl~tg~~~~~~~ 206 (741)
T 1yr2_A 133 SQLLVRPADAP-VGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGG-----SDWRTVKFVGVADGKPLADEL 206 (741)
T ss_dssp CEEEEEETTSC-TTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETT-----CSEEEEEEEETTTCCEEEEEE
T ss_pred EEEEEEcCCcc-CCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCC-----CceEEEEEEECCCCCCCCccC
Confidence 56788876410 14566665421 111 14678999999999999987531 223789999999998765521
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceE
Q 007620 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (595)
Q Consensus 80 ~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (595)
.. ..+..+.|||| +.|+|........ .+. ..+ . ....+|
T Consensus 207 -~~----~~~~~~~wspD-~~l~~~~~~~~~~-----------------~~~------~~~-------~-----~~~~~v 245 (741)
T 1yr2_A 207 -KW----VKFSGLAWLGN-DALLYSRFAEPKE-----------------GQA------FQA-------L-----NYNQTV 245 (741)
T ss_dssp -EE----EESCCCEESTT-SEEEEEECCCC--------------------------------------C-----CCCCEE
T ss_pred -CC----ceeccEEEECC-CEEEEEEecCccc-----------------ccc------ccc-------C-----CCCCEE
Confidence 11 12368999999 9999975321100 000 000 0 013578
Q ss_pred EEEcC-CCC--eeecCCC----CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCc--e-EEEeccCCC
Q 007620 160 VLGSL-DGT--AKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--L-VRELCDLPP 229 (595)
Q Consensus 160 ~~~d~-~g~--~~~lt~~----~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~--~-~~~l~~~~~ 229 (595)
|+.++ ++. .+.+... .....+.|||||++|++....... ...+|+++|++++ + .+.|.....
T Consensus 246 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~--------~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD--------PVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC--------SCCEEEEEEEETTEECCCEEEECSSS
T ss_pred EEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC--------CcceEEEEECCCCCCcccEEecCCCC
Confidence 88888 443 2333221 245688999999999998754310 1358999999876 4 555543210
Q ss_pred CccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCC--Cceecccc-Cccccceee
Q 007620 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE--KPEILHKL-DLRFRSVSW 306 (595)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~--~~~~l~~~-~~~~~~~~w 306 (595)
.....++|||+. |++... +. .....|+++++ +++ +.+.++.. ...+..+.|
T Consensus 318 --------------~~~~~~~~dg~~-l~~~s~-~~-------~~~~~l~~~d~---~~~~~~~~~l~~~~~~~l~~~~~ 371 (741)
T 1yr2_A 318 --------------AQWDFVDGVGDQ-LWFVSG-DG-------APLKKIVRVDL---SGSTPRFDTVVPESKDNLESVGI 371 (741)
T ss_dssp --------------SCEEEEEEETTE-EEEEEC-TT-------CTTCEEEEEEC---SSSSCEEEEEECCCSSEEEEEEE
T ss_pred --------------ceEEEEeccCCE-EEEEEC-CC-------CCCCEEEEEeC---CCCccccEEEecCCCCeEEEEEE
Confidence 111234588874 655521 11 11346777776 432 34555432 223445566
Q ss_pred cCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEe-e--cccccccCCCCCCCeeeCCCCCEEEEEeee
Q 007620 307 CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF-D--RVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (595)
Q Consensus 307 spDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~-~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~ 373 (595)
+ +..+++... +.+..+||++++++ +..+.|. . ..+.. +.+++||+.+++....
T Consensus 372 ~--~~~lv~~~~-~dg~~~l~~~~~~g--~~~~~l~~~~~~~v~~---------~~~s~d~~~l~~~~ss 427 (741)
T 1yr2_A 372 A--GNRLFASYI-HDAKSQVLAFDLDG--KPAGAVSLPGIGSASG---------LSGRPGDRHAYLSFSS 427 (741)
T ss_dssp E--BTEEEEEEE-ETTEEEEEEEETTS--CEEEECBCSSSCEEEE---------EECCBTCSCEEEEEEE
T ss_pred E--CCEEEEEEE-ECCEEEEEEEeCCC--CceeeccCCCCeEEEE---------eecCCCCCEEEEEEcC
Confidence 6 333443322 24567899999876 3334442 1 11222 6788899888777643
No 38
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.48 E-value=5.7e-12 Score=127.28 Aligned_cols=88 Identities=8% Similarity=-0.121 Sum_probs=57.0
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|+++++.. .+|+..+++..........+.|||||+ |+++... .....|+++++++|+.+++......
T Consensus 17 ~i~v~~~d~--~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~-------~~~~~v~~~~~~~g~~~~~~~~~~~-- 84 (347)
T 3hfq_A 17 GIYQGTLDT--TAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE-------DDEGGIAAWQIDGQTAHKLNTVVAP-- 84 (347)
T ss_dssp EEEEEEEET--TTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE-------TTEEEEEEEEEETTEEEEEEEEEEE--
T ss_pred CEEEEEEcC--CCCeEEEeeeeeccCCcceEEEccCCe-EEEEEec-------CCCceEEEEEecCCcEEEeeeeecC--
Confidence 466665541 267666654333344577899999998 6666542 1347899999988887666542110
Q ss_pred cccccceEEecCCcEEEEEe
Q 007620 86 NAVFGSFVWVNNSTLLIFTI 105 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~ 105 (595)
......+.|+|||+.|++..
T Consensus 85 ~~~p~~~a~spdg~~l~~~~ 104 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSAN 104 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEE
T ss_pred CCCCEEEEECCCCCEEEEEe
Confidence 11345789999999988863
No 39
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.44 E-value=4.1e-11 Score=117.93 Aligned_cols=284 Identities=8% Similarity=0.056 Sum_probs=178.3
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~ 112 (595)
...-.+++||++|+|.... ...+||.++.++..+++|+... .--++++|+.|+|........
T Consensus 16 ~n~g~~~~~g~~iy~~n~~--------d~~~ly~~~~dg~~~~~l~~~~---------~~~i~~~g~~Iyy~~~~~~~~- 77 (302)
T 3s25_A 16 YNAGLFCESDGEVFFSNTN--------DNGRLYAMNIDGSNIHKLSNDT---------AMYINADKNYVYYVRNNNQKI- 77 (302)
T ss_dssp GGTTCEEEETTEEEEEEGG--------GTTEEEEEETTSCSCEEEEEEE---------EEEEEECSSEEEEEEECC----
T ss_pred ecceEEEEeCCEEEEEeCC--------CCceEEEEcCCCCCCEEccCCc---------eeeEEEcCCEEEEEECCCCcc-
Confidence 3344678999999998653 2478999999999999996421 234689999999974321000
Q ss_pred CCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCC-CeeecCCCCeeeeeEECCCCCeEEE
Q 007620 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTPAVYTAVEPSPDQKYVLI 191 (595)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~lt~~~~~~~~~~SpDg~~l~~ 191 (595)
. . . ..+. .....||+++++| +.++|+... ...|+++|++|+|
T Consensus 78 ---------------~-~-----~---~~~~----------~n~~~Iy~i~~dg~~~~~l~~~~---~~~~s~~g~~Iy~ 120 (302)
T 3s25_A 78 ---------------T-S-----Q---TFFS----------YDRNSLCRIKRNGHGSTVLDPDP---CIYASLIGNYIYY 120 (302)
T ss_dssp ---------------------------CCSS----------CCSEEEEEEETTSCCCEEEECSC---EEEEEEETTEEEE
T ss_pred ---------------c-c-----c---ceec----------cCCCeEEEEeCCCCcceEeecCC---ccEEEEeCCEEEE
Confidence 0 0 0 0000 0246799999977 556666543 2368899999999
Q ss_pred EEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccc
Q 007620 192 TSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVE 271 (595)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~ 271 (595)
+...+. ....|++++++|...++|+.... ..++++|+ .|||.. .
T Consensus 121 ~~~~~~---------~~~~Iy~~~~dGs~~~~lt~~~~-----------------~~~~~~g~-~iy~t~---~------ 164 (302)
T 3s25_A 121 LHYDTQ---------TATSLYRIRIDGEEKKKIKNHYL-----------------FTCNTSDR-YFYYNN---P------ 164 (302)
T ss_dssp EEESSS---------SCEEEEEEETTSCCCEEEESSCC-----------------CCSEEETT-EEEEEC---T------
T ss_pred EeecCC---------CCceEEEEECCCCCeEEEeCCCc-----------------eEeeEECC-EEEEEe---C------
Confidence 962111 13589999999888888765421 23466776 477761 1
Q ss_pred cCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccC
Q 007620 272 VSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 351 (595)
Q Consensus 272 ~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~ 351 (595)
....|++.++ +|+..+.|.... ...+ ++|++..|++..+.. ..+|+++++++ ...+.|++...
T Consensus 165 --g~~~Iy~~~l---~g~~~~~l~~~~--~~~~-~~P~g~~iy~t~~~~--~~~I~~~~ldG--~~~~~Lt~~~~----- 227 (302)
T 3s25_A 165 --KNGQLYRYDT---ASQSEALFYDCN--CYKP-VVLDDTNVYYMDVNR--DNAIVHVNINN--PNPVVLTEANI----- 227 (302)
T ss_dssp --TTCCEEEEET---TTTEEEEEECSC--EEEE-EEEETTEEEEEEGGG--TTEEEEECSSS--CCCEECSCSCE-----
T ss_pred --CCceEEEEEC---CCCCEEEEeCCC--ccce-eeecCCEEEEEEcCC--CcEEEEEECCC--CCeEEEeCCCc-----
Confidence 1346787776 666666665422 2223 459999888876532 25899999999 45566654322
Q ss_pred CCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceeeEEeeeCCCc
Q 007620 352 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 431 (595)
Q Consensus 352 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 431 (595)
+.++++|+.||+..... ...| +++++.....++|.... .
T Consensus 228 ------~~~~~~g~~Iy~~~~~~---~~~i----------------~~~~~DG~~r~~l~~~~-------~--------- 266 (302)
T 3s25_A 228 ------EHYNVYGSLIFYQRGGD---NPAL----------------CVVKNDGTGFKELAKGE-------F--------- 266 (302)
T ss_dssp ------EEEEEETTEEEEEECSS---SCEE----------------EEEETTSCCCEEEEESC-------E---------
T ss_pred ------ceEEECCCEEEEEECCC---CcEE----------------EEEECCCCccEEeeCCc-------c---------
Confidence 45778899988764321 2334 45677555556664321 1
Q ss_pred ccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEe
Q 007620 432 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 468 (595)
Q Consensus 432 ~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt 468 (595)
..+++.+++++++..... .++.+.+.+...++|.
T Consensus 267 ~~i~i~~d~Iy~td~~~~---~i~~~~~dGs~~~~l~ 300 (302)
T 3s25_A 267 CNINVTSQYVYFTDFVSN---KEYCTSTQNPDTIKAL 300 (302)
T ss_dssp EEEEECSSEEEEEETTTC---CEEEEESSSCCSCEEC
T ss_pred ceEEEeCCEEEEEECCCC---eEEEEECCCCCceEec
Confidence 123556789988864332 3888887665555554
No 40
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.42 E-value=2.6e-10 Score=114.02 Aligned_cols=257 Identities=9% Similarity=-0.014 Sum_probs=148.1
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCce--EecccCCC
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESPD 82 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~--~~lt~~~~ 82 (595)
..|.+.|+. +++.......... .. .+.|||||++|++... ....|+++|+++++. ..+....
T Consensus 20 ~~v~~~d~~----~~~~~~~~~~~~~-~~-~~~~s~dg~~l~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~~- 83 (331)
T 3u4y_A 20 RRISFFSTD----TLEILNQITLGYD-FV-DTAITSDCSNVVVTSD---------FCQTLVQIETQLEPPKVVAIQEGQ- 83 (331)
T ss_dssp TEEEEEETT----TCCEEEEEECCCC-EE-EEEECSSSCEEEEEES---------TTCEEEEEECSSSSCEEEEEEECS-
T ss_pred CeEEEEeCc----ccceeeeEEccCC-cc-eEEEcCCCCEEEEEeC---------CCCeEEEEECCCCceeEEecccCC-
Confidence 357888887 6776555433332 44 8999999998777653 246899999998874 3332222
Q ss_pred ccccccccc-eEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEE
Q 007620 83 ICLNAVFGS-FVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (595)
Q Consensus 83 ~~~~~~~~~-~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (595)
.... +.|+|||+.|+ .... .+ ....|++
T Consensus 84 -----~~~~~~~~s~dg~~l~-~~~~---------------------~~------------------------~~~~i~v 112 (331)
T 3u4y_A 84 -----SSMADVDITPDDQFAV-TVTG---------------------LN------------------------HPFNMQS 112 (331)
T ss_dssp -----SCCCCEEECTTSSEEE-ECCC---------------------SS------------------------SSCEEEE
T ss_pred -----CCccceEECCCCCEEE-EecC---------------------CC------------------------CcccEEE
Confidence 2335 89999999888 4110 00 0126777
Q ss_pred EcC-CCCee-ecCCCCeeeeeEECCCCCeEEEEEcccCccccccCccccee-EEEEcCCC-ceEEEec--cCCCCccCCc
Q 007620 162 GSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQK-VQVWTTDG-KLVRELC--DLPPAEDIPV 235 (595)
Q Consensus 162 ~d~-~g~~~-~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~-l~~~d~~g-~~~~~l~--~~~~~~~~~~ 235 (595)
+|+ +++.. .+........++|||||++|+++.... .. +.+|+++. +...... ..+.
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~~------ 174 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSS------------ANTVRRFKIDADGVLFDTGQEFISG------ 174 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETT------------TTEEEEEEECTTCCEEEEEEEEECS------
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCC------------CceEEEEEECCCCcEeecCCccccC------
Confidence 887 45433 333333446899999999988775432 24 66666552 2221110 0000
Q ss_pred cccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc---eeccccCccccceeecCCCcE
Q 007620 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFRSVSWCDDSLA 312 (595)
Q Consensus 236 ~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~---~~l~~~~~~~~~~~wspDg~~ 312 (595)
......+.|+|||+. ++... .....+.+++. ..++. ............+.|+|||+.
T Consensus 175 -----~~~~~~~~~spdg~~-l~v~~-----------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 234 (331)
T 3u4y_A 175 -----GTRPFNITFTPDGNF-AFVAN-----------LIGNSIGILET---QNPENITLLNAVGTNNLPGTIVVSRDGST 234 (331)
T ss_dssp -----SSSEEEEEECTTSSE-EEEEE-----------TTTTEEEEEEC---SSTTSCEEEEEEECSSCCCCEEECTTSSE
T ss_pred -----CCCccceEECCCCCE-EEEEe-----------CCCCeEEEEEC---CCCcccceeeeccCCCCCceEEECCCCCE
Confidence 012346889999983 44431 11346777786 33444 222233345677899999997
Q ss_pred EEEEEeecccceEEEEEeCCCCCCCcEEEe--ecccccccCCC--CCCCeeeCCCCCEEEEEee
Q 007620 313 LVNETWYKTSQTRTWLVCPGSKDVAPRVLF--DRVFENVYSDP--GSPMMTRTSTGTNVIAKIK 372 (595)
Q Consensus 313 l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~--~~~~~~~~~~~--~~~~~~~~~dg~~l~~~~~ 372 (595)
++.... ....|+++|+.++ +.+.+. ..... ....+ +...+.|+|||+.|++...
T Consensus 235 l~v~~~---~~~~i~~~d~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 235 VYVLTE---STVDVFNFNQLSG--TLSFVKSFGHGLL-IDPRPLFGANQMALNKTETKLFISAN 292 (331)
T ss_dssp EEEECS---SEEEEEEEETTTT--EEEEEEEEECCCC-CCCGGGTTCCCEEECTTSSEEEEEET
T ss_pred EEEEEc---CCCEEEEEECCCC--ceeeecccccccc-cCCCCcccccceEECCCCCEEEEecC
Confidence 654421 2346889999873 333331 11100 00000 0112689999999887764
No 41
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.41 E-value=1e-10 Score=115.05 Aligned_cols=239 Identities=10% Similarity=0.035 Sum_probs=158.4
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEeccccccc----CCCceEEEEEECCCCceEecccCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNV----SSCKLRVWIADAETGEAKPLFESP 81 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~----~~~~~~L~v~d~~~g~~~~lt~~~ 81 (595)
.||-++.. ++..++|+. ....-++|+|++|+|+......+.. ......|+++++++++.++|+...
T Consensus 38 ~ly~~~~d----g~~~~~l~~------~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~ 107 (302)
T 3s25_A 38 RLYAMNID----GSNIHKLSN------DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP 107 (302)
T ss_dssp EEEEEETT----SCSCEEEEE------EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC
T ss_pred eEEEEcCC----CCCCEEccC------CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC
Confidence 48888876 678888872 2235679999999999865310000 002578999999999888886432
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEE
Q 007620 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (595)
Q Consensus 82 ~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (595)
...|+++|+.|+|.... .. ....||+
T Consensus 108 ---------~~~~s~~g~~Iy~~~~~--------------------~~-------------------------~~~~Iy~ 133 (302)
T 3s25_A 108 ---------CIYASLIGNYIYYLHYD--------------------TQ-------------------------TATSLYR 133 (302)
T ss_dssp ---------EEEEEEETTEEEEEEES--------------------SS-------------------------SCEEEEE
T ss_pred ---------ccEEEEeCCEEEEEeec--------------------CC-------------------------CCceEEE
Confidence 24789999999996200 00 1357999
Q ss_pred EcCCC-CeeecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccccc
Q 007620 162 GSLDG-TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (595)
Q Consensus 162 ~d~~g-~~~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~ 240 (595)
++++| +.++|+.... ..++|+|+.|+|+.... ..|++++++|+..+.|...+.
T Consensus 134 ~~~dGs~~~~lt~~~~---~~~~~~g~~iy~t~~g~------------~~Iy~~~l~g~~~~~l~~~~~----------- 187 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYL---FTCNTSDRYFYYNNPKN------------GQLYRYDTASQSEALFYDCNC----------- 187 (302)
T ss_dssp EETTSCCCEEEESSCC---CCSEEETTEEEEECTTT------------CCEEEEETTTTEEEEEECSCE-----------
T ss_pred EECCCCCeEEEeCCCc---eEeeEECCEEEEEeCCC------------ceEEEEECCCCCEEEEeCCCc-----------
Confidence 99987 6677775533 45788999999996522 379999999988887754321
Q ss_pred ccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeec
Q 007620 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK 320 (595)
Q Consensus 241 ~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~ 320 (595)
...+.|++. .|||....+ ...|+..++ +|+..+.|+.... +.|+|++..|++....
T Consensus 188 -----~~~~~P~g~-~iy~t~~~~----------~~~I~~~~l---dG~~~~~Lt~~~~----~~~~~~g~~Iy~~~~~- 243 (302)
T 3s25_A 188 -----YKPVVLDDT-NVYYMDVNR----------DNAIVHVNI---NNPNPVVLTEANI----EHYNVYGSLIFYQRGG- 243 (302)
T ss_dssp -----EEEEEEETT-EEEEEEGGG----------TTEEEEECS---SSCCCEECSCSCE----EEEEEETTEEEEEECS-
T ss_pred -----cceeeecCC-EEEEEEcCC----------CcEEEEEEC---CCCCeEEEeCCCc----ceEEECCCEEEEEECC-
Confidence 112348887 477763211 136777786 7767777764332 5689999988775422
Q ss_pred ccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007620 321 TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (595)
Q Consensus 321 ~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 372 (595)
....|+.++++|. .++.|..... ...+..+.+|||+..
T Consensus 244 -~~~~i~~~~~DG~--~r~~l~~~~~-----------~~i~i~~d~Iy~td~ 281 (302)
T 3s25_A 244 -DNPALCVVKNDGT--GFKELAKGEF-----------CNINVTSQYVYFTDF 281 (302)
T ss_dssp -SSCEEEEEETTSC--CCEEEEESCE-----------EEEEECSSEEEEEET
T ss_pred -CCcEEEEEECCCC--ccEEeeCCcc-----------ceEEEeCCEEEEEEC
Confidence 2258999999984 4566654322 234456677777753
No 42
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.41 E-value=1.9e-10 Score=116.71 Aligned_cols=89 Identities=17% Similarity=0.140 Sum_probs=55.2
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.+|+++++.. .+|+.++++.+ .........|||||++|++....+.. .+...+|.++.++|+.+++.......
T Consensus 27 ~~i~~~~~d~--~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~----~~~v~~~~~~~~~g~~~~~~~~~~~~ 99 (361)
T 3scy_A 27 KGIYTFRFNE--ETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKD----QAAVSAFAFDKEKGTLHLLNTQKTMG 99 (361)
T ss_dssp CEEEEEEEET--TTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSST----TCEEEEEEEETTTTEEEEEEEEECSS
T ss_pred CCEEEEEEeC--CCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCC----CCcEEEEEEeCCCCcEEEeeEeccCC
Confidence 3677877642 37888777755 44456677999999998877653100 24556787887778877775432110
Q ss_pred ccccccceEEecCCcEEEEE
Q 007620 85 LNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~ 104 (595)
.....+.+ ||+.|++.
T Consensus 100 --~~p~~~~~--dg~~l~~~ 115 (361)
T 3scy_A 100 --ADPCYLTT--NGKNIVTA 115 (361)
T ss_dssp --SCEEEEEE--CSSEEEEE
T ss_pred --CCcEEEEE--CCCEEEEE
Confidence 01223444 88887775
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.39 E-value=8.4e-10 Score=113.04 Aligned_cols=266 Identities=9% Similarity=0.028 Sum_probs=161.0
Q ss_pred ceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccc
Q 007620 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (595)
Q Consensus 61 ~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 140 (595)
...|+++|+++++......... .+..+.|+|||+.|++...
T Consensus 11 d~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~---------------------------------- 51 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANA---------------------------------- 51 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEG----------------------------------
T ss_pred CCEEEEEECCCCeEEEEeecCC-----CcceEEECCCCCEEEEECC----------------------------------
Confidence 4678999999888665543332 4568999999998877521
Q ss_pred cccCcCCccceEEeecceEEEEcC-CCCee-ecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC
Q 007620 141 LLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (595)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~-~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g 218 (595)
....|.++|+ +++.. .+........++|||||++|+++.... ..|++||+.+
T Consensus 52 --------------~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~------------~~v~v~d~~~ 105 (391)
T 1l0q_A 52 --------------HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMAS------------STLSVIDTTS 105 (391)
T ss_dssp --------------GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTT------------TEEEEEETTT
T ss_pred --------------CCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCC------------CEEEEEECCC
Confidence 0135667777 55433 333333556899999999998886432 3799999987
Q ss_pred ceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccC
Q 007620 219 KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD 298 (595)
Q Consensus 219 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~ 298 (595)
++........ .....+.|+|||+. |++.. .....++++|+ ..++........
T Consensus 106 ~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~~~-----------~~~~~v~~~d~---~~~~~~~~~~~~ 157 (391)
T 1l0q_A 106 NTVAGTVKTG-------------KSPLGLALSPDGKK-LYVTN-----------NGDKTVSVINT---VTKAVINTVSVG 157 (391)
T ss_dssp TEEEEEEECS-------------SSEEEEEECTTSSE-EEEEE-----------TTTTEEEEEET---TTTEEEEEEECC
T ss_pred CeEEEEEeCC-------------CCcceEEECCCCCE-EEEEe-----------CCCCEEEEEEC---CCCcEEEEEecC
Confidence 7654432211 11346889999984 43331 12346778886 333443333333
Q ss_pred ccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeec--ccccccCCCCCCCeeeCCCCCEEEEEeeecCC
Q 007620 299 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 376 (595)
Q Consensus 299 ~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~ 376 (595)
.....+.|+|||..++... ... ..|+++|+.++ +....... .... +.|+++|+.+++...+..
T Consensus 158 ~~~~~~~~~~dg~~l~~~~-~~~--~~v~~~d~~~~--~~~~~~~~~~~~~~---------~~~~~~g~~l~~~~~~~~- 222 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVAN-FDS--MSISVIDTVTN--SVIDTVKVEAAPSG---------IAVNPEGTKAYVTNVDKY- 222 (391)
T ss_dssp SSEEEEEECTTSSEEEEEE-TTT--TEEEEEETTTT--EEEEEEECSSEEEE---------EEECTTSSEEEEEEECSS-
T ss_pred CCcceEEECCCCCEEEEEe-CCC--CEEEEEECCCC--eEEEEEecCCCccc---------eEECCCCCEEEEEecCcC-
Confidence 4456789999998764432 112 36888999873 32222221 1222 789999998887764211
Q ss_pred cccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEE
Q 007620 377 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHI 456 (595)
Q Consensus 377 ~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~ 456 (595)
...++ .+|+.+++......... .+.. ..|+++++.++++.+.. ..+.+
T Consensus 223 -~~~v~----------------~~d~~~~~~~~~~~~~~-----~~~~-------~~~s~dg~~l~~s~~~d---~~v~v 270 (391)
T 1l0q_A 223 -FNTVS----------------MIDTGTNKITARIPVGP-----DPAG-------IAVTPDGKKVYVALSFX---NTVSV 270 (391)
T ss_dssp -CCEEE----------------EEETTTTEEEEEEECCS-----SEEE-------EEECTTSSEEEEEETTT---TEEEE
T ss_pred -CCcEE----------------EEECCCCeEEEEEecCC-----CccE-------EEEccCCCEEEEEcCCC---CEEEE
Confidence 12232 35776665444332211 1111 35788998887765332 56899
Q ss_pred EeCCCCceee
Q 007620 457 LSWPLKKSSQ 466 (595)
Q Consensus 457 ~d~~~~~~~~ 466 (595)
+|+..++...
T Consensus 271 ~d~~~~~~~~ 280 (391)
T 1l0q_A 271 IDTATNTITA 280 (391)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCcEEE
Confidence 9988776543
No 44
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.38 E-value=4.1e-10 Score=112.78 Aligned_cols=263 Identities=12% Similarity=0.087 Sum_probs=138.6
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|++.++.. +|+.+.+..+.....+....|||||++|++.... ++.-.+|-++.++++.+.+......
T Consensus 16 ~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~~-- 83 (343)
T 1ri6_A 16 QIHVWNLNH---EGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP-------EFRVLAYRIAPDDGALTFAAESALP-- 83 (343)
T ss_dssp EEEEEEECT---TSCEEEEEEEECSSCCCCEEECTTSSEEEEEETT-------TTEEEEEEECTTTCCEEEEEEEECS--
T ss_pred eEEEEEECC---CCcEEEeeeEecCCCCceEEECCCCCEEEEeecC-------CCeEEEEEecCCCCceeeccccccC--
Confidence 577888852 4554444433444467789999999998876642 1334445455447776655332211
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-
Q 007620 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL- 164 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~- 164 (595)
..+..+.|+|||+.|++.... ...|.++++
T Consensus 84 -~~~~~~~~s~dg~~l~~~~~~------------------------------------------------~~~i~~~d~~ 114 (343)
T 1ri6_A 84 -GSLTHISTDHQGQFVFVGSYN------------------------------------------------AGNVSVTRLE 114 (343)
T ss_dssp -SCCSEEEECTTSSEEEEEETT------------------------------------------------TTEEEEEEEE
T ss_pred -CCCcEEEEcCCCCEEEEEecC------------------------------------------------CCeEEEEECC
Confidence 135688999999988876321 012333333
Q ss_pred CCC---ee-ecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC-ceEEEec--cCCCCccCCccc
Q 007620 165 DGT---AK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVRELC--DLPPAEDIPVCY 237 (595)
Q Consensus 165 ~g~---~~-~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~l~--~~~~~~~~~~~~ 237 (595)
+|. .. .+........++|+|||++|++..... ..+.+||+.+ ++...+. ......
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~~~~~~~------ 176 (343)
T 1ri6_A 115 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ------------DRICLFTVSDDGHLVAQDPAEVTTVE------ 176 (343)
T ss_dssp TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG------------TEEEEEEECTTSCEEEEEEEEEECST------
T ss_pred CCccccccccccCCCCceEEEECCCCCEEEEecCCC------------CEEEEEEecCCCceeeecccccccCC------
Confidence 331 11 122222345789999999998775322 3688888875 5544322 110000
Q ss_pred cccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccc---cC------ccccceeecC
Q 007620 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK---LD------LRFRSVSWCD 308 (595)
Q Consensus 238 ~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~---~~------~~~~~~~wsp 308 (595)
....+.+.|+|||+. ++... .....+.+++.+. ..++...+.. .. .....+.|+|
T Consensus 177 ---~~~~~~~~~~pdg~~-l~~~~-----------~~~~~i~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 177 ---GAGPRHMVFHPNEQY-AYCVN-----------ELNSSVDVWELKD-PHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp ---TCCEEEEEECTTSSE-EEEEE-----------TTTTEEEEEESSC-TTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred ---CCCcceEEECCCCCE-EEEEe-----------CCCCEEEEEEecC-CCCcEEEEeeccccCccccccCCccceEECC
Confidence 011345789999983 44431 1123455556411 1223322111 11 1223588999
Q ss_pred CCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 309 DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 309 Dg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
||+.++... ...+ .|.++|++...+..+.+........ + ..+.|++||+.|++..
T Consensus 241 dg~~l~v~~-~~~~--~i~v~d~~~~~~~~~~~~~~~~~~~---~--~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 241 DGRHLYACD-RTAS--LITVFSVSEDGSVLSKEGFQPTETQ---P--RGFNVDHSGKYLIAAG 295 (343)
T ss_dssp TSSEEEEEE-TTTT--EEEEEEECTTSCCEEEEEEEECSSS---C--CCEEECTTSSEEEEEC
T ss_pred CCCEEEEEe-cCCC--EEEEEEEcCCCCceEEeeeecCCCc---c--ceEEECCCCCEEEEec
Confidence 998765442 1223 4555665521123333321111110 1 1289999999888765
No 45
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.38 E-value=6.1e-10 Score=112.14 Aligned_cols=254 Identities=11% Similarity=-0.029 Sum_probs=150.9
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|++.|+. +++....... +.....+.|||||++|++... ....|+++|+++++............
T Consensus 70 ~v~~~d~~----~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~---------~~~~v~~~d~~~~~~~~~~~~~~~~~ 134 (353)
T 3vgz_A 70 VVYRLDPV----TLEVTQAIHN--DLKPFGATINNTTQTLWFGNT---------VNSAVTAIDAKTGEVKGRLVLDDRKR 134 (353)
T ss_dssp EEEEECTT----TCCEEEEEEE--SSCCCSEEEETTTTEEEEEET---------TTTEEEEEETTTCCEEEEEESCCCCC
T ss_pred cEEEEcCC----CCeEEEEEec--CCCcceEEECCCCCEEEEEec---------CCCEEEEEeCCCCeeEEEEecCCCcc
Confidence 48888887 6665544422 234778999999998777653 24689999999988644433321100
Q ss_pred -----cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEE
Q 007620 86 -----NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (595)
Q Consensus 86 -----~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (595)
......+.|+|||+.|++.... ....|+
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------------------------------------~~~~i~ 167 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIG-----------------------------------------------KESVIW 167 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEES-----------------------------------------------SSCEEE
T ss_pred ccccCCCCCceEEECCCCCEEEEEecC-----------------------------------------------CCceEE
Confidence 0013468999999988775210 023577
Q ss_pred EEcC-CCCee-ecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccc
Q 007620 161 LGSL-DGTAK-DFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCY 237 (595)
Q Consensus 161 ~~d~-~g~~~-~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~ 237 (595)
++|+ +++.. .+. .......+.|+|||++|++... ...++++|+.+++...........
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-------------~~~i~~~d~~~~~~~~~~~~~~~~------ 228 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-------------DGELITIDTADNKILSRKKLLDDG------ 228 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-------------TSEEEEEETTTTEEEEEEECCCSS------
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-------------CCeEEEEECCCCeEEEEEEcCCCC------
Confidence 7887 45433 333 2223457899999999888753 237889999877654332211000
Q ss_pred cccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEE
Q 007620 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 317 (595)
Q Consensus 238 ~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~ 317 (595)
.......+.|+|||+. ++... .....++++|. ..++......... ...+.|+|||..++...
T Consensus 229 --~~~~~~~~~~s~dg~~-l~~~~-----------~~~~~v~~~d~---~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 229 --KEHFFINISLDTARQR-AFITD-----------SKAAEVLVVDT---RNGNILAKVAAPE-SLAVLFNPARNEAYVTH 290 (353)
T ss_dssp --SCCCEEEEEEETTTTE-EEEEE-----------SSSSEEEEEET---TTCCEEEEEECSS-CCCEEEETTTTEEEEEE
T ss_pred --CCcccceEEECCCCCE-EEEEe-----------CCCCEEEEEEC---CCCcEEEEEEcCC-CceEEECCCCCEEEEEE
Confidence 0001224789999984 54431 11246777785 3344433222222 25689999998655443
Q ss_pred eecccceEEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCCCCEEEEEee
Q 007620 318 WYKTSQTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (595)
Q Consensus 318 ~~~~~~~~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 372 (595)
. ....|+++|+.++ +....+. ..... +.|++||+.+++...
T Consensus 291 ~---~~~~v~~~d~~~~--~~~~~~~~~~~~~~---------~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 291 R---QAGKVSVIDAKSY--KVVKTFDTPTHPNS---------LALSADGKTLYVSVK 333 (353)
T ss_dssp T---TTTEEEEEETTTT--EEEEEEECCSEEEE---------EEECTTSCEEEEEEE
T ss_pred C---CCCeEEEEECCCC--eEEEEEecCCCCCe---------EEEcCCCCEEEEEEc
Confidence 1 1237889998873 2222221 12222 789999998887754
No 46
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.37 E-value=4.6e-10 Score=112.17 Aligned_cols=292 Identities=10% Similarity=0.031 Sum_probs=158.1
Q ss_pred ceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCC
Q 007620 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPK 114 (595)
Q Consensus 35 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~ 114 (595)
++.|++++++++.+.. ....|.++|+++++.......... .. .+.|+|||+.|++....
T Consensus 2 ~~~~~~~~~~~~v~~~---------~~~~v~~~d~~~~~~~~~~~~~~~----~~-~~~~s~dg~~l~~~~~~------- 60 (331)
T 3u4y_A 2 NAMFQTTSNFGIVVEQ---------HLRRISFFSTDTLEILNQITLGYD----FV-DTAITSDCSNVVVTSDF------- 60 (331)
T ss_dssp -----CCCCEEEEEEG---------GGTEEEEEETTTCCEEEEEECCCC----EE-EEEECSSSCEEEEEEST-------
T ss_pred ceeEcCCCCEEEEEec---------CCCeEEEEeCcccceeeeEEccCC----cc-eEEEcCCCCEEEEEeCC-------
Confidence 5678888887655442 246899999999987655443321 34 88999999988775210
Q ss_pred ccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe--eecCCCCeeee-eEECCCCCeEE
Q 007620 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA--KDFGTPAVYTA-VEPSPDQKYVL 190 (595)
Q Consensus 115 ~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~--~~lt~~~~~~~-~~~SpDg~~l~ 190 (595)
...|+++|+ +++. +.+........ ++|||||++|+
T Consensus 61 -----------------------------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 99 (331)
T 3u4y_A 61 -----------------------------------------CQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV 99 (331)
T ss_dssp -----------------------------------------TCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred -----------------------------------------CCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE
Confidence 135777888 5553 33433333344 89999999998
Q ss_pred EEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCccc
Q 007620 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV 270 (595)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~ 270 (595)
+..... ....|++||+.+++........ .....+.|+|||+. |+... .+
T Consensus 100 -~~~~~~---------~~~~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~spdg~~-l~~~~-~~------ 148 (331)
T 3u4y_A 100 -TVTGLN---------HPFNMQSYSFLKNKFISTIPIP-------------YDAVGIAISPNGNG-LILID-RS------ 148 (331)
T ss_dssp -ECCCSS---------SSCEEEEEETTTTEEEEEEECC-------------TTEEEEEECTTSSC-EEEEE-ET------
T ss_pred -EecCCC---------CcccEEEEECCCCCeEEEEECC-------------CCccceEECCCCCE-EEEEe-cC------
Confidence 432210 0127999999876654332111 11246889999984 54432 11
Q ss_pred ccCCcce-EEeccCCCCCCCCce----eccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCc---EEEe
Q 007620 271 EVSPRDI-IYTQPAEPAEGEKPE----ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP---RVLF 342 (595)
Q Consensus 271 ~~~~~~~-~~~~d~~~~~g~~~~----~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~---~~l~ 342 (595)
... +.++++ ..++... ...........+.|+|||+.++.... ....|+++|+.++ +. ...+
T Consensus 149 ----~~~~i~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~---~~~~v~v~d~~~~--~~~~~~~~~ 217 (331)
T 3u4y_A 149 ----SANTVRRFKI--DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL---IGNSIGILETQNP--ENITLLNAV 217 (331)
T ss_dssp ----TTTEEEEEEE--CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET---TTTEEEEEECSST--TSCEEEEEE
T ss_pred ----CCceEEEEEE--CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeC---CCCeEEEEECCCC--cccceeeec
Confidence 122 444443 1112221 11122233567889999986554432 2237888898874 32 1112
Q ss_pred ecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccc-ee
Q 007620 343 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF-ET 421 (595)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~-~~ 421 (595)
... . .| ..+.|+|||+.+++.... ...++ .+|+.+++.+.+......-.. ..
T Consensus 218 ~~~--~---~~--~~~~~spdg~~l~v~~~~----~~~i~----------------~~d~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T 3u4y_A 218 GTN--N---LP--GTIVVSRDGSTVYVLTES----TVDVF----------------NFNQLSGTLSFVKSFGHGLLIDPR 270 (331)
T ss_dssp ECS--S---CC--CCEEECTTSSEEEEECSS----EEEEE----------------EEETTTTEEEEEEEEECCCCCCCG
T ss_pred cCC--C---CC--ceEEECCCCCEEEEEEcC----CCEEE----------------EEECCCCceeeecccccccccCCC
Confidence 111 0 01 127899999988876532 22233 467777766443211100000 00
Q ss_pred eEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCc
Q 007620 422 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (595)
Q Consensus 422 ~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~ 463 (595)
.. .......|++|++++++.... -..+.++++....
T Consensus 271 ~~---~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 271 PL---FGANQMALNKTETKLFISANI---SRELKVFTISGKV 306 (331)
T ss_dssp GG---TTCCCEEECTTSSEEEEEETT---TTEEEEEETTSCE
T ss_pred Cc---ccccceEECCCCCEEEEecCC---CCcEEEEEecCCc
Confidence 00 000123689999988776533 3468888876543
No 47
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.35 E-value=1.1e-09 Score=109.22 Aligned_cols=267 Identities=11% Similarity=0.002 Sum_probs=147.9
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCC-cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~-~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~ 83 (595)
..|++.|+. +++......+.... ....+.|||||++|++... ....|+++|+.+++..........
T Consensus 11 ~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~---------~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 11 DKLVVIDTE----KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN---------KSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp TEEEEEETT----TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET---------TTTEEEEEETTTCCEEEEEECCBT
T ss_pred CeEEEEECC----CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC---------CCCeEEEEECCCCCeEeeEEcCCc
Confidence 468889987 66555443333311 3678999999998877653 246899999998886543222210
Q ss_pred c-ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEE
Q 007620 84 C-LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (595)
Q Consensus 84 ~-~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (595)
. .......+.|+|||+.|++..... +. . .+. .. ....+|+++
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~---------------------~~------~-------~~~--~~-~~~~~i~v~ 120 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPV---------------------RL------E-------LTH--FE-VQPTRVALY 120 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEE---------------------EE------C-------SSC--EE-ECCCEEEEE
T ss_pred ccccccccceEECCCCCEEEEEeccc---------------------cc------c-------ccc--cc-ccCceEEEE
Confidence 0 001245789999999888862100 00 0 000 00 013578888
Q ss_pred cC-CCCee-ecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccccc
Q 007620 163 SL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (595)
Q Consensus 163 d~-~g~~~-~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~ 240 (595)
|+ +++.. .+..+.....+.|||||++|++.. ..++++|+.+++.........
T Consensus 121 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---------------~~i~~~d~~~~~~~~~~~~~~----------- 174 (337)
T 1pby_B 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLG---------------RDLHVMDPEAGTLVEDKPIQS----------- 174 (337)
T ss_dssp ETTTTEEEEEEECCSSCCCEEECTTSSCEEEES---------------SSEEEEETTTTEEEEEECSTT-----------
T ss_pred ECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC---------------CeEEEEECCCCcEeeeeeccc-----------
Confidence 88 45433 333333345688999999998872 168899998776543322110
Q ss_pred ccCCCCceeecCCCeeEEEEE------------eecCCCcccccCCcceEEeccCCCCCCCCceecc--ccCccccceee
Q 007620 241 REGMRSISWRADKPSTLYWVE------------AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSW 306 (595)
Q Consensus 241 ~~~~~~~~wspdg~~~l~~~~------------~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~--~~~~~~~~~~w 306 (595)
......|+|||+. |+... ....+....-......++++|. ..++...+. ........+.|
T Consensus 175 --~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T 1pby_B 175 --WEAETYAQPDVLA-VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL---ETGEMAMREVRIMDVFYFSTAV 248 (337)
T ss_dssp --TTTTTBCCCBCCC-CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET---TTCCEEEEEEEECSSCEEEEEE
T ss_pred --cCCCceeCCCccE-EeeeccCCCceeeeeeccccccccccccccccceEEEeC---CCCCceEeecCCCCCceeeEEE
Confidence 0123467777763 22110 0000000000001114667775 434443222 12223456899
Q ss_pred cCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCCCCEEEEE
Q 007620 307 CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAK 370 (595)
Q Consensus 307 spDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~ 370 (595)
+|||+.++... ..|+++|+.++ +...... ..... +.|++||+.+++.
T Consensus 249 s~dg~~l~~~~------~~v~~~d~~~~--~~~~~~~~~~~~~~---------~~~s~dg~~l~~~ 297 (337)
T 1pby_B 249 NPAKTRAFGAY------NVLESFDLEKN--ASIKRVPLPHSYYS---------VNVSTDGSTVWLG 297 (337)
T ss_dssp CTTSSEEEEEE------SEEEEEETTTT--EEEEEEECSSCCCE---------EEECTTSCEEEEE
T ss_pred CCCCCEEEEeC------CeEEEEECCCC--cCcceecCCCceee---------EEECCCCCEEEEE
Confidence 99998766542 37999999873 2222222 11222 7899999988775
No 48
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.32 E-value=3.5e-09 Score=109.99 Aligned_cols=322 Identities=11% Similarity=0.044 Sum_probs=174.4
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc-c
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI-C 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~-~ 84 (595)
.||..|.. ++..+.+..++.......+.||| +..++++... ...|+++|+.+++..+....... .
T Consensus 102 ~l~~~d~~----~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~---------~~~i~~~d~~~g~~~~~~~~~~~~~ 167 (433)
T 3bws_A 102 KLIALDKE----GITHRFISRFKTGFQPKSVRFID-NTRLAIPLLE---------DEGMDVLDINSGQTVRLSPPEKYKK 167 (433)
T ss_dssp CEEECCBT----TCSEEEEEEEECSSCBCCCEESS-SSEEEEEBTT---------SSSEEEEETTTCCEEEECCCHHHHT
T ss_pred EEEEECCC----CCcceEEEEEcCCCCceEEEEeC-CCeEEEEeCC---------CCeEEEEECCCCeEeeecCcccccc
Confidence 45555554 44434444333444567899999 5567776532 35688899999887664322100 0
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
....+..+.|+++|+.++.... ...|+++++
T Consensus 168 ~~~~v~~~~~~~~~~~~~s~~~-------------------------------------------------d~~v~~~d~ 198 (433)
T 3bws_A 168 KLGFVETISIPEHNELWVSQMQ-------------------------------------------------ANAVHVFDL 198 (433)
T ss_dssp TCCEEEEEEEGGGTEEEEEEGG-------------------------------------------------GTEEEEEET
T ss_pred cCCceeEEEEcCCCEEEEEECC-------------------------------------------------CCEEEEEEC
Confidence 0113557899999886554310 134666676
Q ss_pred -CCCe-eecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccc
Q 007620 165 -DGTA-KDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (595)
Q Consensus 165 -~g~~-~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~ 241 (595)
+++. ..+. .......++|+|||++|+++.... ..|.+||+.+++........
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~i~~~d~~~~~~~~~~~~~------------- 253 (433)
T 3bws_A 199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWIS------------EDISVIDRKTKLEIRKTDKI------------- 253 (433)
T ss_dssp TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTT------------TEEEEEETTTTEEEEECCCC-------------
T ss_pred CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCC------------CcEEEEECCCCcEEEEecCC-------------
Confidence 4433 2332 233456889999999998776322 37899998876553322111
Q ss_pred cCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecc
Q 007620 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT 321 (595)
Q Consensus 242 ~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~ 321 (595)
.....+.|+|||+. |+... .+.+... .....++++++ ..++.............+.|+||+..++....
T Consensus 254 ~~~~~~~~~~~g~~-l~~~~-~~~~~~~---~~dg~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~--- 322 (433)
T 3bws_A 254 GLPRGLLLSKDGKE-LYIAQ-FSASNQE---SGGGRLGIYSM---DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDM--- 322 (433)
T ss_dssp SEEEEEEECTTSSE-EEEEE-EESCTTC---SCCEEEEEEET---TTTEEEEEEEEEECEEEEEECSSTTEEEEEET---
T ss_pred CCceEEEEcCCCCE-EEEEE-CCCCccc---cCCCeEEEEEC---CCCcEEeeccCCCCcceEEECCCCCEEEEEec---
Confidence 11345789999973 44432 1111100 12346778886 33444433333345567899999986554421
Q ss_pred cceEEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCCCCEEEEEeeecCCc-ccEEEEecCCCCCCCCcceeE
Q 007620 322 SQTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE-QIYILLNGRGFTPEGNIPFLD 398 (595)
Q Consensus 322 ~~~~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~-~~~l~~~~~g~~~~~~~~~l~ 398 (595)
....|.++|+.++ +...... ..+.. +.|+++|+.+++........ ...++ .+ .....+.
T Consensus 323 ~~~~v~v~d~~~~--~~~~~~~~~~~~~~---------~~~s~dg~~l~~~~~~~~~~~~~~~~-~g------~~dg~v~ 384 (433)
T 3bws_A 323 CCSKIEVYDLKEK--KVQKSIPVFDKPNT---------IALSPDGKYLYVSCRGPNHPTEGYLK-KG------LVLGKVY 384 (433)
T ss_dssp TTTEEEEEETTTT--EEEEEEECSSSEEE---------EEECTTSSEEEEEECCCCCTTTCTTS-CC------SSCCEEE
T ss_pred CCCEEEEEECCCC--cEEEEecCCCCCCe---------EEEcCCCCEEEEEecCCCcccccccc-cc------ccceEEE
Confidence 1237888898873 3222222 12222 78999999888776432100 00000 00 0001233
Q ss_pred eeecCCCceeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeC
Q 007620 399 LFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 459 (595)
Q Consensus 399 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~ 459 (595)
.+|+.+++........ ..+.. ..|+++++.+++.... . ..++++++
T Consensus 385 ~~d~~~~~~~~~~~~~-----~~~~~-------~~~s~dg~~l~~~~~~-d--~~i~v~~~ 430 (433)
T 3bws_A 385 VIDTTTDTVKEFWEAG-----NQPTG-------LDVSPDNRYLVISDFL-D--HQIRVYRR 430 (433)
T ss_dssp EEETTTTEEEEEEECS-----SSEEE-------EEECTTSCEEEEEETT-T--TEEEEEEE
T ss_pred EEECCCCcEEEEecCC-----CCCce-------EEEcCCCCEEEEEECC-C--CeEEEEEe
Confidence 5677777655443321 11221 3578898887665432 2 34666664
No 49
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.27 E-value=2.6e-09 Score=107.63 Aligned_cols=300 Identities=10% Similarity=0.001 Sum_probs=148.5
Q ss_pred CceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCccccccccccc
Q 007620 60 CKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (595)
Q Consensus 60 ~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~ 139 (595)
..-.+|.+|.++|+...+...... .....+.|+|||+ |++.... +
T Consensus 16 ~~i~v~~~d~~tg~~~~~~~~~~~---~~p~~~a~spdg~-l~~~~~~----------------------~--------- 60 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTNDGLLAAT---QNPTYLALSAKDC-LYSVDKE----------------------D--------- 60 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEEEEC---SCCCCEEECTTCE-EEEEEEE----------------------T---------
T ss_pred CCEEEEEEcCCCCeEEEeeeeecc---CCcceEEEccCCe-EEEEEec----------------------C---------
Confidence 346688888888887665332211 1356799999999 6665210 0
Q ss_pred ccccCcCCccceEEeecceEEEEcC-CCCeeecCC----CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEE
Q 007620 140 NLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT----PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (595)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~----~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (595)
....|+++++ +|+.+.+.. ......++|||||++|++..... ..+.+|
T Consensus 61 ---------------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~------------~~v~v~ 113 (347)
T 3hfq_A 61 ---------------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK------------GTAEVM 113 (347)
T ss_dssp ---------------TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT------------TEEEEE
T ss_pred ---------------CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC------------CEEEEE
Confidence 0235666776 455444432 22345789999999998886322 357777
Q ss_pred cCC-CceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCcee
Q 007620 215 TTD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (595)
Q Consensus 215 d~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~ 293 (595)
++. ++..+.+.........|. ..........+.|+|||+ ++... ...+.++++++ ..+++...
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~spdg~--l~v~~-----------~~~~~v~~~~~--~~~g~~~~ 177 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPR-PEQDGSHIHYTDLTPDNR--LAVID-----------LGSDKVYVYNV--SDAGQLSE 177 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSS-TTCSSCCEEEEEECTTSC--EEEEE-----------TTTTEEEEEEE--CTTSCEEE
T ss_pred EeCCCCCeeecceeecCCCCCC-ccccCCCceEEEECCCCc--EEEEe-----------CCCCEEEEEEE--CCCCcEEE
Confidence 764 444444332211000000 000000122478999998 54331 11235666665 11334333
Q ss_pred ccc----cCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeeccc-ccccCC-CCCCCeeeCCCCCEE
Q 007620 294 LHK----LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF-ENVYSD-PGSPMMTRTSTGTNV 367 (595)
Q Consensus 294 l~~----~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~-~~~~~~-~~~~~~~~~~dg~~l 367 (595)
+.. .......+.|+|||+.++... ...+...+|.++..+ ++.+.+..... ...+.. .....+.|+|||++|
T Consensus 178 ~~~~~~~~g~~p~~~~~spdg~~l~v~~-~~~~~v~v~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l 254 (347)
T 3hfq_A 178 QSVLTMEAGFGPRHLVFSPDGQYAFLAG-ELSSQIASLKYDTQT--GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFL 254 (347)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEE-TTTTEEEEEEEETTT--TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEE
T ss_pred eeeEEcCCCCCCceEEECCCCCEEEEEe-CCCCEEEEEEecCCC--CceEEeeeeeecCCCCCCCCcceeEEECCCCCEE
Confidence 221 111334579999998655532 222333455555434 23232211000 000000 000127899999998
Q ss_pred EEEeeecCCcccEEEEecCCCCCCCCcceeEeeecC-CCceeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEEe
Q 007620 368 IAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKE 446 (595)
Q Consensus 368 ~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~ 446 (595)
|+..... ....+| ++. +|+.+.+...... ...+. ...|++|+++|++...
T Consensus 255 ~v~~~~~--~~v~v~------------------~~~~~g~~~~~~~~~~~--~~~~~-------~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 255 YVSNRGY--NTLAVF------------------AVTADGHLTLIQQISTE--GDFPR-------DFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp EEEEETT--TEEEEE------------------EECGGGCEEEEEEEECS--SSCCC-------EEEECTTSSEEEEEET
T ss_pred EEEeCCC--CEEEEE------------------EECCCCcEEEeEEEecC--CCCcC-------eEEECCCCCEEEEEEc
Confidence 8765421 122232 332 2332322111100 00111 2468999998876654
Q ss_pred cCCCcceEEEEeCCCCceeeEecC
Q 007620 447 SKTEITQYHILSWPLKKSSQITNF 470 (595)
Q Consensus 447 s~~~p~~l~~~d~~~~~~~~Lt~~ 470 (595)
. ..--.+|.++..+++++++...
T Consensus 306 ~-~~~v~v~~~d~~tg~l~~~~~~ 328 (347)
T 3hfq_A 306 N-TDNATLYARDLTSGKLSLLQKD 328 (347)
T ss_dssp T-TTEEEEEEECTTTCCEEEEEEE
T ss_pred C-CCcEEEEEEeCCCCeEEecccc
Confidence 3 3334456668777888777643
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.25 E-value=9e-09 Score=102.49 Aligned_cols=248 Identities=10% Similarity=0.029 Sum_probs=146.5
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|.|+|+...........+........+....|+|||+.|+.... ...|.++++.+++...+......
T Consensus 73 ~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~~d~~~~~~~~~~~~~~~-- 140 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE----------ASTLSIWDLAAPTPRIKAELTSS-- 140 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES----------SSEEEEEECCCC--EEEEEEECS--
T ss_pred eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC----------CCcEEEEECCCCCcceeeecccC--
Confidence 477888873111112223321123346888999999998887653 25688889888763222111110
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-
Q 007620 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL- 164 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~- 164 (595)
...+..+.|+|+++.|+.... ...|.++++
T Consensus 141 ~~~i~~~~~~~~~~~l~~~~~-------------------------------------------------dg~v~~~d~~ 171 (337)
T 1gxr_A 141 APACYALAISPDSKVCFSCCS-------------------------------------------------DGNIAVWDLH 171 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEET-------------------------------------------------TSCEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEeC-------------------------------------------------CCcEEEEeCC
Confidence 114568999999998877521 123555566
Q ss_pred CCC-eeecCC-CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccccccc
Q 007620 165 DGT-AKDFGT-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (595)
Q Consensus 165 ~g~-~~~lt~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~ 242 (595)
+++ ...+.. ......+.|+|||+.|+..... ..+.+||+.+++.......+ .
T Consensus 172 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~-------------~ 225 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD-------------NTVRSWDLREGRQLQQHDFT-------------S 225 (337)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECS-------------S
T ss_pred CCceeeeeecccCceEEEEECCCCCEEEEEecC-------------CcEEEEECCCCceEeeecCC-------------C
Confidence 343 223332 3345689999999998877532 37899998876554332211 1
Q ss_pred CCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeeccc
Q 007620 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS 322 (595)
Q Consensus 243 ~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~ 322 (595)
....+.|+|+++. ++.. . ....+++++. ..++...+......+..+.|+||+..++... .++
T Consensus 226 ~v~~~~~s~~~~~-l~~~-~-----------~~~~i~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg 287 (337)
T 1gxr_A 226 QIFSLGYCPTGEW-LAVG-M-----------ESSNVEVLHV---NKPDKYQLHLHESCVLSLKFAYCGKWFVSTG--KDN 287 (337)
T ss_dssp CEEEEEECTTSSE-EEEE-E-----------TTSCEEEEET---TSSCEEEECCCSSCEEEEEECTTSSEEEEEE--TTS
T ss_pred ceEEEEECCCCCE-EEEE-c-----------CCCcEEEEEC---CCCCeEEEcCCccceeEEEECCCCCEEEEec--CCC
Confidence 1235789999873 3322 1 1235666775 4344444545556678899999999877654 223
Q ss_pred ceEEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 323 QTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 323 ~~~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
.|.++|+.++ +...... ..+.. +.|+++|+.++...
T Consensus 288 --~i~~~~~~~~--~~~~~~~~~~~v~~---------~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 288 --LLNAWRTPYG--ASIFQSKESSSVLS---------CDISVDDKYIVTGS 325 (337)
T ss_dssp --EEEEEETTTC--CEEEEEECSSCEEE---------EEECTTSCEEEEEE
T ss_pred --cEEEEECCCC--eEEEEecCCCcEEE---------EEECCCCCEEEEec
Confidence 6777888773 3222221 22222 78999999876654
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.23 E-value=3e-08 Score=98.66 Aligned_cols=227 Identities=14% Similarity=0.123 Sum_probs=134.2
Q ss_pred CCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceE-ecccCCCccccccccceEEecCCcEEEEEec
Q 007620 28 PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIP 106 (595)
Q Consensus 28 ~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~-~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~ 106 (595)
.....+....|||||+.|+... ...|.++++.+++.. .+...........+..+.|+||++.|+....
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 117 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-----------KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-----------BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES
T ss_pred cCCCceEEEEEecCCcEEEEcC-----------CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC
Confidence 3444688999999999988764 245667788765421 1211000001124678999999998877521
Q ss_pred CCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe---eecC-CCCeeeeeE
Q 007620 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFG-TPAVYTAVE 181 (595)
Q Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~---~~lt-~~~~~~~~~ 181 (595)
...|.++++ +++. ..+. .......++
T Consensus 118 -------------------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~ 148 (337)
T 1gxr_A 118 -------------------------------------------------ASTLSIWDLAAPTPRIKAELTSSAPACYALA 148 (337)
T ss_dssp -------------------------------------------------SSEEEEEECCCC--EEEEEEECSSSCEEEEE
T ss_pred -------------------------------------------------CCcEEEEECCCCCcceeeecccCCCceEEEE
Confidence 123444555 2331 1222 223456889
Q ss_pred ECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEE-EeccCCCCccCCccccccccCCCCceeecCCCeeEEEE
Q 007620 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (595)
Q Consensus 182 ~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (595)
|+|+++.|+..... ..+.+||+.+++.. .+.... .....+.|+|+++. |+..
T Consensus 149 ~~~~~~~l~~~~~d-------------g~v~~~d~~~~~~~~~~~~~~-------------~~i~~~~~~~~~~~-l~~~ 201 (337)
T 1gxr_A 149 ISPDSKVCFSCCSD-------------GNIAVWDLHNQTLVRQFQGHT-------------DGASCIDISNDGTK-LWTG 201 (337)
T ss_dssp ECTTSSEEEEEETT-------------SCEEEEETTTTEEEEEECCCS-------------SCEEEEEECTTSSE-EEEE
T ss_pred ECCCCCEEEEEeCC-------------CcEEEEeCCCCceeeeeeccc-------------CceEEEEECCCCCE-EEEE
Confidence 99999998877542 36889998866543 332211 11345889999873 3322
Q ss_pred EeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEE
Q 007620 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (595)
Q Consensus 261 ~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~ 340 (595)
.....+.++|. ..++..........+..+.|+|++..++... ..+ .|.++|+.++ +...
T Consensus 202 ------------~~dg~i~~~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~~--~i~~~~~~~~--~~~~ 260 (337)
T 1gxr_A 202 ------------GLDNTVRSWDL---REGRQLQQHDFTSQIFSLGYCPTGEWLAVGM--ESS--NVEVLHVNKP--DKYQ 260 (337)
T ss_dssp ------------ETTSEEEEEET---TTTEEEEEEECSSCEEEEEECTTSSEEEEEE--TTS--CEEEEETTSS--CEEE
T ss_pred ------------ecCCcEEEEEC---CCCceEeeecCCCceEEEEECCCCCEEEEEc--CCC--cEEEEECCCC--CeEE
Confidence 12346777786 3334433334455677899999999877654 123 5777888773 3333
Q ss_pred Eee--cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 341 LFD--RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 341 l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
+.. ..+.. +.|+++|+.++...
T Consensus 261 ~~~~~~~v~~---------~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 261 LHLHESCVLS---------LKFAYCGKWFVSTG 284 (337)
T ss_dssp ECCCSSCEEE---------EEECTTSSEEEEEE
T ss_pred EcCCccceeE---------EEECCCCCEEEEec
Confidence 322 22222 78999999876654
No 52
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.22 E-value=1.1e-08 Score=110.44 Aligned_cols=219 Identities=14% Similarity=0.197 Sum_probs=134.6
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....|+|||+.|+.... + ..|.++++.+.....+..... .+..+.|+|||+.|+....+
T Consensus 305 ~v~~~~~~~~~~~l~t~~~--------d--~~i~~w~~~~~~~~~~~~~~~-----~v~~~~~s~~g~~l~~~~~d---- 365 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASD--------D--KTVKLWNRNGQHLQTLTGHSS-----SVWGVAFSPDGQTIASASDD---- 365 (577)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCEEEEETTSCEEEEECCCSS-----CEEEEEECTTSSEEEEEETT----
T ss_pred CeEEEEECCCCCEEEEEeC--------C--CeEEEEeCCCCeeEEEeCCCC-----CEEEEEECCCCCEEEEEeCC----
Confidence 4778899999999877653 2 345555887776666654333 46688999999988775211
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCC-eeecC-CCCeeeeeEECCCCCeE
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFG-TPAVYTAVEPSPDQKYV 189 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~lt-~~~~~~~~~~SpDg~~l 189 (595)
..+.+++.+++ ...+. ....+..++|||||++|
T Consensus 366 ---------------------------------------------g~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 400 (577)
T 2ymu_A 366 ---------------------------------------------KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTI 400 (577)
T ss_dssp ---------------------------------------------SEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred ---------------------------------------------CEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 12233344442 22232 22345678999999999
Q ss_pred EEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcc
Q 007620 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (595)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (595)
+....+ ..+.+||..+...+.+.... .....+.|+||++. |+..
T Consensus 401 ~~~~~d-------------~~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~d~~~-l~~~--------- 444 (577)
T 2ymu_A 401 ASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SSVWGVAFSPDDQT-IASA--------- 444 (577)
T ss_dssp EEEETT-------------SEEEEECTTCCEEEEEECCS-------------SCEEEEEECTTSSE-EEEE---------
T ss_pred EEEeCC-------------CEEEEEeCCCCEEEEecCCC-------------CCeEEEEECCCCCE-EEEE---------
Confidence 877542 36888998777666654321 11235789999873 3322
Q ss_pred cccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEee--cccc
Q 007620 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--RVFE 347 (595)
Q Consensus 270 ~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~--~~~~ 347 (595)
.....+.+++. ++.....+......+..+.|+||+..|+... .++ .|.++|.++ ...+.+.. ..+.
T Consensus 445 ---~~d~~v~~w~~---~~~~~~~~~~~~~~v~~~~~spd~~~las~~--~d~--~i~iw~~~~--~~~~~~~~h~~~v~ 512 (577)
T 2ymu_A 445 ---SDDKTVKLWNR---NGQLLQTLTGHSSSVRGVAFSPDGQTIASAS--DDK--TVKLWNRNG--QLLQTLTGHSSSVR 512 (577)
T ss_dssp ---ETTSEEEEEET---TSCEEEEEECCSSCEEEEEECTTSCEEEEEE--TTS--EEEEEETTS--CEEEEEECCSSCEE
T ss_pred ---cCCCEEEEEEC---CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe--CCC--EEEEEcCCC--CEEEEEeCCCCCEE
Confidence 11235666775 4433444544555677899999999877654 223 466667655 22333322 2233
Q ss_pred cccCCCCCCCeeeCCCCCEEEEEe
Q 007620 348 NVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 348 ~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
. +.|+|||++|+...
T Consensus 513 ~---------l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 513 G---------VAFSPDGQTIASAS 527 (577)
T ss_dssp E---------EEECTTSSCEEEEE
T ss_pred E---------EEEcCCCCEEEEEE
Confidence 3 78999999876554
No 53
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.22 E-value=2.2e-08 Score=101.01 Aligned_cols=303 Identities=8% Similarity=0.031 Sum_probs=162.5
Q ss_pred CcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007620 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (595)
Q Consensus 31 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~ 110 (595)
..+...+|||||+.||.... ...|.++++.+++......... ..+..+.|+||++.|+....
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~~~---- 94 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSK----------DSSASVWYSLNGERLGTLDGHT----GTIWSIDVDCFTKYCVTGSA---- 94 (369)
T ss_dssp SCEEEEEECTTSCEEEEEES----------SSCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSEEEEEET----
T ss_pred ceEEEEEEcCCCCEEEEEeC----------CCEEEEEeCCCchhhhhhhhcC----CcEEEEEEcCCCCEEEEEeC----
Confidence 35889999999998877643 2457777988887544433221 15678999999998877521
Q ss_pred CCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecCCCCeeeeeEECCCCCe
Q 007620 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYTAVEPSPDQKY 188 (595)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt~~~~~~~~~~SpDg~~ 188 (595)
...|.++++ +++. ..+........+.|+|+|+.
T Consensus 95 ---------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~ 129 (369)
T 3zwl_B 95 ---------------------------------------------DYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNY 129 (369)
T ss_dssp ---------------------------------------------TTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSE
T ss_pred ---------------------------------------------CCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCE
Confidence 123555666 4433 23333445668999999999
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceE----EEeccCCCCccCCcccccccc--CCCCceeecCCCeeEEEEEe
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV----RELCDLPPAEDIPVCYNSVRE--GMRSISWRADKPSTLYWVEA 262 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~----~~l~~~~~~~~~~~~~~~~~~--~~~~~~wspdg~~~l~~~~~ 262 (595)
|++...... .....+.+||+..+.. ......+.. .+..... ....+.|+|+++. |+..
T Consensus 130 l~~~~~~~~--------~~~g~i~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-l~~~-- 193 (369)
T 3zwl_B 130 FLAILDNVM--------KNPGSINIYEIERDSATHELTKVSEEPIH-----KIITHEGLDAATVAGWSTKGKY-IIAG-- 193 (369)
T ss_dssp EEEEECCBT--------TBCCEEEEEEEEECTTTCCEEEECSSCSE-----EEECCTTCCCEEEEEECGGGCE-EEEE--
T ss_pred EEEecCCcc--------CCCCEEEEEEecCCccceeecccccceee-----eccCCcCccceeEEEEcCCCCE-EEEE--
Confidence 988864311 0124677787653211 111100000 0000000 1235788998873 3322
Q ss_pred ecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEE
Q 007620 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (595)
Q Consensus 263 ~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l 341 (595)
.....+.++|+ .++++.. .+......+..+.|+||+..|+.... ++ .|.++|+.++ +....
T Consensus 194 ----------~~dg~i~i~d~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~--~i~v~d~~~~--~~~~~ 255 (369)
T 3zwl_B 194 ----------HKDGKISKYDV--SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR--DT--NSFLVDVSTL--QVLKK 255 (369)
T ss_dssp ----------ETTSEEEEEET--TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET--TS--EEEEEETTTC--CEEEE
T ss_pred ----------cCCCEEEEEEC--CCCcEeEEEEecCCCceeEEEECCCCCEEEEecC--Cc--eEEEEECCCC--ceeee
Confidence 12245777776 1212222 23334556778999999998776542 23 6888898873 33322
Q ss_pred ee--cccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccc
Q 007620 342 FD--RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 419 (595)
Q Consensus 342 ~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 419 (595)
+. ..+.. +.|+++|+.+++...+. ...++... .......+..+|+.+++.........
T Consensus 256 ~~~~~~~~~---------~~~~~~~~~l~~~~~~~---~~~~~~~~----~~~~~~~i~~~d~~~~~~~~~~~~~~---- 315 (369)
T 3zwl_B 256 YETDCPLNT---------AVITPLKEFIILGGGQE---AKDVTTTS----ANEGKFEARFYHKIFEEEIGRVQGHF---- 315 (369)
T ss_dssp EECSSCEEE---------EEECSSSSEEEEEECCC--------------------CEEEEEETTTCCEEEEEECCS----
T ss_pred ecCCCCcee---------EEecCCCceEEEeecCC---CceEEEEe----cCCCcceeEEEecCCCcchhheeccc----
Confidence 22 12222 78999999888776431 22232211 01111224445666665444332211
Q ss_pred eeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCC
Q 007620 420 ETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (595)
Q Consensus 420 ~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~ 461 (595)
..+. ...|+++++.|+....+ ..+.+.++..
T Consensus 316 ~~v~-------~~~~s~~~~~l~s~~~d----g~v~iw~~~~ 346 (369)
T 3zwl_B 316 GPLN-------TVAISPQGTSYASGGED----GFIRLHHFEK 346 (369)
T ss_dssp SCEE-------EEEECTTSSEEEEEETT----SEEEEEEECH
T ss_pred CcEE-------EEEECCCCCEEEEEcCC----CeEEEEECcc
Confidence 1122 14578888866544322 4577777654
No 54
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.21 E-value=3.1e-08 Score=106.92 Aligned_cols=219 Identities=14% Similarity=0.191 Sum_probs=132.0
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....|+|||+.|+.... + ..|.+++..+...+.+..... .+..+.|+||++.|+....+
T Consensus 264 ~v~~v~~~~d~~~l~~~~~--------d--~~i~~w~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~t~~~d---- 324 (577)
T 2ymu_A 264 SVNGVAFRPDGQTIASASD--------D--KTVKLWNRNGQLLQTLTGHSS-----SVWGVAFSPDGQTIASASDD---- 324 (577)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCEEEEETTSCEEEEECCCSS-----CEEEEEECTTSSEEEEEETT----
T ss_pred CEEEEEEcCCCCEEEEEeC--------C--CEEEEEeCCCcEEEEEecCCC-----CeEEEEECCCCCEEEEEeCC----
Confidence 5778899999998876553 2 345666776544455543332 46688999999988765211
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCC-CeeecCC-CCeeeeeEECCCCCeE
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-PAVYTAVEPSPDQKYV 189 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~lt~-~~~~~~~~~SpDg~~l 189 (595)
..|.++++++ ....+.. ......++|+|||++|
T Consensus 325 ---------------------------------------------~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 325 ---------------------------------------------KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp ---------------------------------------------SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ---------------------------------------------CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEE
Confidence 1122334433 2333332 2345678999999999
Q ss_pred EEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcc
Q 007620 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (595)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (595)
+..... ..+.+||..+.....+.... .....+.|+|||+. |+..
T Consensus 360 ~~~~~d-------------g~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~dg~~-l~~~--------- 403 (577)
T 2ymu_A 360 ASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SSVRGVAFSPDGQT-IASA--------- 403 (577)
T ss_dssp EEEETT-------------SEEEEEETTCCEEEEEECCS-------------SCEEEEEECTTSSC-EEEE---------
T ss_pred EEEeCC-------------CEEEEEcCCCCEEEEecCCC-------------CCeEEEEECCCCCE-EEEE---------
Confidence 877532 36778888777666654321 11345789999984 3322
Q ss_pred cccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEee--cccc
Q 007620 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--RVFE 347 (595)
Q Consensus 270 ~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~--~~~~ 347 (595)
.....+.+++. ++...+.+......+..+.|+||+..++... .++ .|.++|+.+ ...+.+.. ..+.
T Consensus 404 ---~~d~~v~~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~--~d~--~v~~w~~~~--~~~~~~~~~~~~v~ 471 (577)
T 2ymu_A 404 ---SDDKTVKLWNR---NGQLLQTLTGHSSSVWGVAFSPDDQTIASAS--DDK--TVKLWNRNG--QLLQTLTGHSSSVR 471 (577)
T ss_dssp ---ETTSEEEEECT---TCCEEEEEECCSSCEEEEEECTTSSEEEEEE--TTS--EEEEEETTS--CEEEEEECCSSCEE
T ss_pred ---eCCCEEEEEeC---CCCEEEEecCCCCCeEEEEECCCCCEEEEEc--CCC--EEEEEECCC--CEEEEEcCCCCCEE
Confidence 11235666775 4323334444455677889999999877654 223 566667765 22233322 2222
Q ss_pred cccCCCCCCCeeeCCCCCEEEEEe
Q 007620 348 NVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 348 ~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
. +.|+|||+.|+...
T Consensus 472 ~---------~~~spd~~~las~~ 486 (577)
T 2ymu_A 472 G---------VAFSPDGQTIASAS 486 (577)
T ss_dssp E---------EEECTTSCEEEEEE
T ss_pred E---------EEEcCCCCEEEEEe
Confidence 2 78999999877654
No 55
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.19 E-value=1.1e-08 Score=106.20 Aligned_cols=256 Identities=9% Similarity=0.010 Sum_probs=152.0
Q ss_pred eeEEEecCCCCCCCCceeeecC----CCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGY----PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~----~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~ 81 (595)
.|++.|+. +|+..+.... .....+....|+|+|+.++ +.. ....|+++++++++........
T Consensus 145 ~i~~~d~~----~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-s~~---------~d~~v~~~d~~~~~~~~~~~~~ 210 (433)
T 3bws_A 145 GMDVLDIN----SGQTVRLSPPEKYKKKLGFVETISIPEHNELWV-SQM---------QANAVHVFDLKTLAYKATVDLT 210 (433)
T ss_dssp SEEEEETT----TCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEE-EEG---------GGTEEEEEETTTCCEEEEEECS
T ss_pred eEEEEECC----CCeEeeecCcccccccCCceeEEEEcCCCEEEE-EEC---------CCCEEEEEECCCceEEEEEcCC
Confidence 38888987 6766654311 1112466789999997543 332 2367888899887754433221
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEE
Q 007620 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (595)
Q Consensus 82 ~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (595)
. ..+..+.|+||++.|++.... ...|++
T Consensus 211 ~----~~~~~~~~~~~~~~l~~~~~~------------------------------------------------~~~i~~ 238 (433)
T 3bws_A 211 G----KWSKILLYDPIRDLVYCSNWI------------------------------------------------SEDISV 238 (433)
T ss_dssp S----SSEEEEEEETTTTEEEEEETT------------------------------------------------TTEEEE
T ss_pred C----CCeeEEEEcCCCCEEEEEecC------------------------------------------------CCcEEE
Confidence 1 145689999999988775210 134666
Q ss_pred EcC-CCCee-ecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccc
Q 007620 162 GSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (595)
Q Consensus 162 ~d~-~g~~~-~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~ 239 (595)
+|+ +++.. .+........++|+|||+.|++......... .....|++||+.+++.......+
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-----~~dg~i~~~d~~~~~~~~~~~~~----------- 302 (433)
T 3bws_A 239 IDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQE-----SGGGRLGIYSMDKEKLIDTIGPP----------- 302 (433)
T ss_dssp EETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTC-----SCCEEEEEEETTTTEEEEEEEEE-----------
T ss_pred EECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccc-----cCCCeEEEEECCCCcEEeeccCC-----------
Confidence 777 45433 3333344568999999999988864321000 01347999999876554432111
Q ss_pred cccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEee
Q 007620 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 319 (595)
Q Consensus 240 ~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~ 319 (595)
.....+.|+|+++. ++... .....+.+++. .+++.............+.|+|||..++.....
T Consensus 303 --~~~~~~~~~~~g~~-l~~~~-----------~~~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 303 --GNKRHIVSGNTENK-IYVSD-----------MCCSKIEVYDL---KEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp --ECEEEEEECSSTTE-EEEEE-----------TTTTEEEEEET---TTTEEEEEEECSSSEEEEEECTTSSEEEEEECC
T ss_pred --CCcceEEECCCCCE-EEEEe-----------cCCCEEEEEEC---CCCcEEEEecCCCCCCeEEEcCCCCEEEEEecC
Confidence 11245789999874 43331 12346777786 434444333344456789999999876654321
Q ss_pred ccc-----------ceEEEEEeCCCCCCCcEEEeec--ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 320 KTS-----------QTRTWLVCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 320 ~~~-----------~~~L~~~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
... ...|+++|+.++ +....+.. .+.. +.|++||+.|++..
T Consensus 366 ~~~~~~~~~~~g~~dg~v~~~d~~~~--~~~~~~~~~~~~~~---------~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 366 PNHPTEGYLKKGLVLGKVYVIDTTTD--TVKEFWEAGNQPTG---------LDVSPDNRYLVISD 419 (433)
T ss_dssp CCCTTTCTTSCCSSCCEEEEEETTTT--EEEEEEECSSSEEE---------EEECTTSCEEEEEE
T ss_pred CCccccccccccccceEEEEEECCCC--cEEEEecCCCCCce---------EEEcCCCCEEEEEE
Confidence 110 127999999873 33323221 1222 78999999887664
No 56
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.19 E-value=1.6e-08 Score=100.64 Aligned_cols=276 Identities=11% Similarity=0.041 Sum_probs=150.4
Q ss_pred ceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccc
Q 007620 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (595)
Q Consensus 61 ~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 140 (595)
...|+++|+.+++........... .....+.|+|||+.|++....
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~--------------------------------- 54 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAG--PTPMVPMVAPGGRIAYATVNK--------------------------------- 54 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCT--TCCCCEEECTTSSEEEEEETT---------------------------------
T ss_pred CCeEEEEECCCCcEEEEEEcCCCC--CCccceEEcCCCCEEEEEeCC---------------------------------
Confidence 468999999988765543322200 014578999999988775210
Q ss_pred cccCcCCccceEEeecceEEEEcC-CCCee-ecCCCC------eeeeeEECCCCCeEEEEEcccCccccccCcc--ccee
Q 007620 141 LLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA------VYTAVEPSPDQKYVLITSMHRPYSYKVPCAR--FSQK 210 (595)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~-~lt~~~------~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~--~~~~ 210 (595)
...|+++|+ +++.. .+.... ....++|||||++|++....... .+... ....
T Consensus 55 ---------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~---~~~~~~~~~~~ 116 (337)
T 1pby_B 55 ---------------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRL---ELTHFEVQPTR 116 (337)
T ss_dssp ---------------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEE---CSSCEEECCCE
T ss_pred ---------------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccc---ccccccccCce
Confidence 135667777 45433 333221 23478999999999888522100 00000 1257
Q ss_pred EEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCC
Q 007620 211 VQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK 290 (595)
Q Consensus 211 l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~ 290 (595)
|++||+.+++........ .....+.|+|||+. |+.. ...++++|+ .+++
T Consensus 117 i~v~d~~~~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~~--------------~~~i~~~d~---~~~~ 165 (337)
T 1pby_B 117 VALYDAETLSRRKAFEAP-------------RQITMLAWARDGSK-LYGL--------------GRDLHVMDP---EAGT 165 (337)
T ss_dssp EEEEETTTTEEEEEEECC-------------SSCCCEEECTTSSC-EEEE--------------SSSEEEEET---TTTE
T ss_pred EEEEECCCCcEEEEEeCC-------------CCcceeEECCCCCE-EEEe--------------CCeEEEEEC---CCCc
Confidence 999999876654322111 11346789999984 4433 124667775 3334
Q ss_pred ceeccccCccccceeecCCCcEEEEEEeec--------------------ccceEEEEEeCCCCCCCcEEEeeccccccc
Q 007620 291 PEILHKLDLRFRSVSWCDDSLALVNETWYK--------------------TSQTRTWLVCPGSKDVAPRVLFDRVFENVY 350 (595)
Q Consensus 291 ~~~l~~~~~~~~~~~wspDg~~l~~~~~~~--------------------~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~ 350 (595)
...............|+|||..++...... .....|+++|+.++ +...+.-......
T Consensus 166 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~- 242 (337)
T 1pby_B 166 LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG--EMAMREVRIMDVF- 242 (337)
T ss_dssp EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC--CEEEEEEEECSSC-
T ss_pred EeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC--CceEeecCCCCCc-
Confidence 333222222123457899987543221000 01126889999884 3332211000000
Q ss_pred CCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceeeEEeeeCCC
Q 007620 351 SDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQG 430 (595)
Q Consensus 351 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~ 430 (595)
...+.|++||+.+++.. + .++ .+|+++++......... .+.
T Consensus 243 ----~~~~~~s~dg~~l~~~~------~-~v~----------------~~d~~~~~~~~~~~~~~-----~~~------- 283 (337)
T 1pby_B 243 ----YFSTAVNPAKTRAFGAY------N-VLE----------------SFDLEKNASIKRVPLPH-----SYY------- 283 (337)
T ss_dssp ----EEEEEECTTSSEEEEEE------S-EEE----------------EEETTTTEEEEEEECSS-----CCC-------
T ss_pred ----eeeEEECCCCCEEEEeC------C-eEE----------------EEECCCCcCcceecCCC-----cee-------
Confidence 00178999999888762 1 232 45776766544332211 111
Q ss_pred cccccccCCEEEEEEecCCCcceEEEEeCCCCceee
Q 007620 431 EEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (595)
Q Consensus 431 ~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~ 466 (595)
...|++|++++++.. ....++++|+.+++...
T Consensus 284 ~~~~s~dg~~l~~~~----~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 284 SVNVSTDGSTVWLGG----ALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEEECTTSCEEEEES----BSSEEEEEETTTCCEEE
T ss_pred eEEECCCCCEEEEEc----CCCcEEEEECcCCcEEE
Confidence 135788998777642 24679999988776543
No 57
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.13 E-value=1.9e-08 Score=101.99 Aligned_cols=231 Identities=14% Similarity=0.198 Sum_probs=121.2
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+...+|||||++||-.+..... --...|++++..+++...............+..+.|+||++.|+-. .+
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~----~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s-~d---- 114 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSR----TWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS-DS---- 114 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSS----SCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-TT----
T ss_pred CEEEEEECCCCCEEEEEcCCCCc----cccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-CC----
Confidence 47789999999988765531000 0135688888877654322111101111246789999999865432 11
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCee------ecCCCCeeeeeEECC
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK------DFGTPAVYTAVEPSP 184 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~------~lt~~~~~~~~~~Sp 184 (595)
| .|.++|+ +++.. .......+..++|||
T Consensus 115 ------------------g---------------------------~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 149 (357)
T 4g56_B 115 ------------------G---------------------------AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS 149 (357)
T ss_dssp ------------------S---------------------------CEEEC--------CCCCEEECCCSSCEEEEEECS
T ss_pred ------------------C---------------------------EEEEeeccccceeEEEeeccCCCCCCEEEEEECC
Confidence 1 1222233 22111 011223456889999
Q ss_pred CCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEE-eccCCCCccCCccccccccCCCCceeecCCCeeEEEEEee
Q 007620 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (595)
Q Consensus 185 Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~ 263 (595)
||++|+..... ..|.+||+.+++... +.... .....+.|++++...++..
T Consensus 150 dg~~l~sgs~d-------------g~v~iwd~~~~~~~~~~~~h~-------------~~v~~v~~s~~~~~~~~s~--- 200 (357)
T 4g56_B 150 DGTQAVSGGKD-------------FSVKVWDLSQKAVLKSYNAHS-------------SEVNCVAACPGKDTIFLSC--- 200 (357)
T ss_dssp SSSEEEEEETT-------------SCEEEEETTTTEEEEEECCCS-------------SCEEEEEECTTCSSCEEEE---
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCCC-------------CCEEEEEEccCCCceeeee---
Confidence 99998876542 368899988765433 32111 1123577888876433322
Q ss_pred cCCCcccccCCcceEEeccCCCCCCCCcee-cc--ccCccccceeecCCCc-EEEEEEeecccceEEEEEeCCCCCCCcE
Q 007620 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LH--KLDLRFRSVSWCDDSL-ALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (595)
Q Consensus 264 d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~-l~--~~~~~~~~~~wspDg~-~l~~~~~~~~~~~~L~~~d~~~~~~~~~ 339 (595)
.....+.++|+ ..++... +. ........+.|+|++. .|+... .++ .|.++|+.+++ ..+
T Consensus 201 ---------~~dg~v~~wd~---~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~--~d~--~i~~wd~~~~~-~~~ 263 (357)
T 4g56_B 201 ---------GEDGRILLWDT---RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD--ETG--NVSLVNIKNPD-SAQ 263 (357)
T ss_dssp ---------ETTSCEEECCT---TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE--SSS--CEEEEESSCGG-GCE
T ss_pred ---------ccCCceEEEEC---CCCceeeeeeeccccccccchhhhhcccceEEEee--ccc--ceeEEECCCCc-EeE
Confidence 11235677776 3233322 21 2233466789999864 455443 223 56677887742 223
Q ss_pred EEe--ecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 340 VLF--DRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 340 ~l~--~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
.+. ...+.. +.|+|+|+.+++..
T Consensus 264 ~~~~~~~~v~~---------l~~sp~~~~~lasg 288 (357)
T 4g56_B 264 TSAVHSQNITG---------LAYSYHSSPFLASI 288 (357)
T ss_dssp EECCCSSCEEE---------EEECSSSSCCEEEE
T ss_pred EEeccceeEEE---------EEEcCCCCCEEEEE
Confidence 332 122332 78999986544443
No 58
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.12 E-value=5.7e-09 Score=115.69 Aligned_cols=245 Identities=10% Similarity=0.023 Sum_probs=148.6
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccc---cCCCceEEEEEECCCCc--eEeccc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDN---VSSCKLRVWIADAETGE--AKPLFE 79 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~---~~~~~~~L~v~d~~~g~--~~~lt~ 79 (595)
..|+++||. +|+..+.+ +. ......+.|| ||+.|+|++....+.+ ......+||+.++.++. .+.|+.
T Consensus 155 ~~i~v~dl~----tg~~~~~~-~~-~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~ 227 (693)
T 3iuj_A 155 REIHLMDVE----SKQPLETP-LK-DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFG 227 (693)
T ss_dssp EEEEEEETT----TCSEEEEE-EE-EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEES
T ss_pred EEEEEEECC----CCCCCccc-cC-CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEe
Confidence 579999998 88876664 22 2135789999 9999999986521000 00234679999997754 356654
Q ss_pred CCC-ccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecce
Q 007620 80 SPD-ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (595)
Q Consensus 80 ~~~-~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (595)
... .. ..+..+.|||||+.|++..... + ..++
T Consensus 228 ~~~~~~--~~~~~~~~SpDg~~l~~~~~~~---------------------~------------------------~~~~ 260 (693)
T 3iuj_A 228 AIPAQH--HRYVGATVTEDDRFLLISAANS---------------------T------------------------SGNR 260 (693)
T ss_dssp CSGGGC--CSEEEEEECTTSCEEEEEEESS---------------------S------------------------SCCE
T ss_pred cCCCCC--eEEEEEEEcCCCCEEEEEEccC---------------------C------------------------CCcE
Confidence 332 10 0234788999999998863210 0 1257
Q ss_pred EEEEcC-CC--CeeecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE---EEeccCCCCcc
Q 007620 159 LVLGSL-DG--TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV---RELCDLPPAED 232 (595)
Q Consensus 159 l~~~d~-~g--~~~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~---~~l~~~~~~~~ 232 (595)
||++++ ++ +.+.|+.........|+++|++|+|.++... ....|+++|++++.. +.+....
T Consensus 261 i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~---------~~~~l~~~d~~~~~~~~~~~l~~~~---- 327 (693)
T 3iuj_A 261 LYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDA---------PNRRLVTVDAANPGPAHWRDLIPER---- 327 (693)
T ss_dssp EEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTC---------TTCEEEEEETTSCCGGGCEEEECCC----
T ss_pred EEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCC---------CCCEEEEEeCCCCCccccEEEecCC----
Confidence 899998 44 5677765432222238899999999876421 135899999987654 4443221
Q ss_pred CCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccc-cCccccceeecCCCc
Q 007620 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSL 311 (595)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~-~~~~~~~~~wspDg~ 311 (595)
... +.|+++++. |++.. .+. ....++++++ +|+..+.+.- ..+.+..+.+++|+.
T Consensus 328 ---------~~~--~~~s~~g~~-lv~~~-~~~--------g~~~l~~~d~---~g~~~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 328 ---------QQV--LTVHSGSGY-LFAEY-MVD--------ATARVEQFDY---EGKRVREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp ---------SSC--EEEEEETTE-EEEEE-EET--------TEEEEEEECT---TSCEEEEECCSSSSEEEECCCCTTCS
T ss_pred ---------CCE--EEEEEECCE-EEEEE-EEC--------CeeEEEEEEC---CCCeeEEeecCCCceEEeeecCCCCC
Confidence 111 278899875 54432 111 1236777786 5555555432 233455677888887
Q ss_pred EEEEEEeecccceEEEEEeCCCCCCCcEEEe
Q 007620 312 ALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (595)
Q Consensus 312 ~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~ 342 (595)
.+++..........||.+|+.+ ++.+.|.
T Consensus 384 ~l~~~~ss~~tP~~l~~~d~~~--g~~~~l~ 412 (693)
T 3iuj_A 384 ALYFGFENYAQPPTLYRFEPKS--GAISLYR 412 (693)
T ss_dssp CEEEEEECSSSCCEEEEECTTT--CCEEEEE
T ss_pred EEEEEecCCCCCCEEEEEECCC--CeEEEEE
Confidence 6555432223345899999987 3455553
No 59
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.12 E-value=6.7e-09 Score=115.99 Aligned_cols=270 Identities=7% Similarity=0.004 Sum_probs=147.0
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEEC---CCC--ceEecccCCCcccc---ccccceEEe-cCCcEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA---ETG--EAKPLFESPDICLN---AVFGSFVWV-NNSTLLI 102 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~---~~g--~~~~lt~~~~~~~~---~~~~~~~Ws-pdg~~l~ 102 (595)
..+.|. |+|.+++|++.... .....+++.+. .++ +.+.+.+......+ ...+.+.|| |||++|+
T Consensus 118 ~~~~p~--~~g~~~yy~~~~~g-----~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lA 190 (751)
T 2xe4_A 118 DMSAPY--VYGKYRYYTREVKG-----KPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVA 190 (751)
T ss_dssp EECCCE--EETTEEEEEEECTT-----CCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEE
T ss_pred cCCCCe--EECCEEEEEEECCC-----CceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEE
Confidence 455665 79999999876421 22356888886 444 44444322100000 024578999 9999999
Q ss_pred EEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CC-CeeecCCC--Ceee
Q 007620 103 FTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP--AVYT 178 (595)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g-~~~~lt~~--~~~~ 178 (595)
|.... .|. ...+||++|+ +| + .+... ....
T Consensus 191 y~~~~---------------------~G~-----------------------~~~~l~v~dl~~g~~--~l~~~~~~~~~ 224 (751)
T 2xe4_A 191 FSVDM---------------------SGN-----------------------EVYTIEFKRISDPSQ--TIADKVSGTNG 224 (751)
T ss_dssp EEEES---------------------SSS-----------------------SCEEEEEEETTCTTC--CCCCCEEEECS
T ss_pred EEEeC---------------------CCC-----------------------ceEEEEEEECCCCCE--eCCccccCcee
Confidence 97431 111 1246999999 55 4 22211 1234
Q ss_pred eeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEE
Q 007620 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (595)
Q Consensus 179 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~ 258 (595)
.++|||||+.|+|++.... ..+.+|+++++.++... ..+.
T Consensus 225 ~~~WspDg~~l~y~~~d~~--------~~~~~v~~~~lgt~~~~--------------------------------~~lv 264 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDET--------LRENKVWRHVMGKLQSE--------------------------------DVCL 264 (751)
T ss_dssp CCEECSSTTEEEEEEECTT--------CCEEEEEEEETTSCGGG--------------------------------CEEE
T ss_pred eEEEecCCCEEEEEEECCC--------CCCCEEEEEECCCCchh--------------------------------cEEE
Confidence 7899999999999975321 01234555544332100 0010
Q ss_pred EEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCc
Q 007620 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (595)
Q Consensus 259 ~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~ 338 (595)
+- . . .......+.|||||+.|++.... .....||++|++++..+.
T Consensus 265 ~~---------------------~----~---------~~~~~~~~~~SpDg~~l~~~~~~-~~~~~l~~~d~~~~~~~~ 309 (751)
T 2xe4_A 265 YE---------------------E----H---------NPLFSAFMYKAADTNTLCIGSQS-PETAEVHLLDLRKGNAHN 309 (751)
T ss_dssp EE---------------------C----C---------CTTCEEEEEECTTSSEEEEEEEC-SSCEEEEEEESSSCTTCC
T ss_pred Ee---------------------c----C---------CCceEEEEEECCCCCEEEEEecC-CCCceEEEEECCCCCCCc
Confidence 10 0 0 00112457899999987776543 245689999998743244
Q ss_pred --EEEeecccccccCCCCCCCeeeCCC---CCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCC-Cceee-ee
Q 007620 339 --RVLFDRVFENVYSDPGSPMMTRTST---GTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT-GSKER-IW 411 (595)
Q Consensus 339 --~~l~~~~~~~~~~~~~~~~~~~~~d---g~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~-g~~~~-l~ 411 (595)
+.|+.... . ..|+++ |+.+++.....+..... |+.+++.+ ++.+. |+
T Consensus 310 ~~~~l~~~~~-~---------~~~s~~~~~g~~l~~~t~~~~a~~~~----------------L~~~d~~~~~~~~~~li 363 (751)
T 2xe4_A 310 TLEIVRPREK-G---------VRYDVQMHGTSHLVILTNEGGAVNHK----------------LLIAPRGQPSDWSHVLV 363 (751)
T ss_dssp CEEESSCCCT-T---------CCEEEEEETTTEEEEEECTTTCTTCE----------------EEEEETTSTTCCCCEEE
T ss_pred eeEEeecCCC-C---------ceEEEeeeeCCEEEEEeCCCCCCCcE----------------EEEEcCCCcccceeeEE
Confidence 55543321 1 334444 78887776432011223 34567654 34444 44
Q ss_pred ecCccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeC-------CCCc-eeeEe
Q 007620 412 ESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW-------PLKK-SSQIT 468 (595)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~-------~~~~-~~~Lt 468 (595)
..... ..+ ..++++++.+++.... .....|+++++ .+++ .++|+
T Consensus 364 ~~~~~---~~l---------~~~~~~~~~lv~~~~~-~g~~~l~~~dl~~~~~~~~~g~~~~~l~ 415 (751)
T 2xe4_A 364 DHSED---VFM---------ESIAVRSNYLVVAGRR-AGLTRIWTMMADSQDGVFKAGTGLREVV 415 (751)
T ss_dssp CCCSS---EEE---------EEEEECSSEEEEEEEE-TTEEEEEEEECCTTTSCCCTTTCCEECC
T ss_pred CCCCC---cEE---------EEEEEECCEEEEEEEe-CCEEEEEEEecccccccccCCccceEEC
Confidence 32211 011 1244566788777654 44567999996 4556 66664
No 60
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.11 E-value=5.6e-08 Score=96.85 Aligned_cols=221 Identities=14% Similarity=0.150 Sum_probs=131.4
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....|+|++..+|-.+. ...|.++|+.+++......... ..+..+.|+|||+.|+....
T Consensus 82 ~v~~~~~~~~~~~l~s~s~----------D~~i~lWd~~~~~~~~~~~~~~----~~~~~~~~spdg~~l~~g~~----- 142 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSL----------DAHIRLWDLENGKQIKSIDAGP----VDAWTLAFSPDSQYLATGTH----- 142 (321)
T ss_dssp CEEEEEECSSSSEEEEEET----------TSEEEEEETTTTEEEEEEECCT----TCCCCEEECTTSSEEEEECT-----
T ss_pred CEEEEEECCCCCEEEEEeC----------CCcEEEEECCCCCEEEEEeCCC----ccEEEEEECCCCCEEEEEcC-----
Confidence 4778899999987765442 2567777998886543322211 13557999999998877521
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecC-CCCeeeeeEECCCCCe
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TPAVYTAVEPSPDQKY 188 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt-~~~~~~~~~~SpDg~~ 188 (595)
...+.++++ +++. ..+. .......++|||||++
T Consensus 143 --------------------------------------------dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 143 --------------------------------------------VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp --------------------------------------------TSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE
T ss_pred --------------------------------------------CCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE
Confidence 123344455 3322 2222 2234568999999999
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCC
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (595)
|+....+ ..+.+||+.+++. ..+.... .....+.|+||++. |+..
T Consensus 179 lasg~~d-------------g~i~iwd~~~~~~~~~~~~h~-------------~~v~~l~~spd~~~-l~s~------- 224 (321)
T 3ow8_A 179 LASGAID-------------GIINIFDIATGKLLHTLEGHA-------------MPIRSLTFSPDSQL-LVTA------- 224 (321)
T ss_dssp EEEEETT-------------SCEEEEETTTTEEEEEECCCS-------------SCCCEEEECTTSCE-EEEE-------
T ss_pred EEEEcCC-------------CeEEEEECCCCcEEEEEcccC-------------CceeEEEEcCCCCE-EEEE-------
Confidence 9877642 3688999886654 3332211 11356899999873 3221
Q ss_pred cccccCCcceEEeccCCCCCCCCc-eeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeec--
Q 007620 268 ANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR-- 344 (595)
Q Consensus 268 ~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~-- 344 (595)
.....+.++|. ..++. ..+......+..+.|+||+..|+... .++ .|.++|+.++. ....+..+
T Consensus 225 -----s~dg~i~iwd~---~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s--~D~--~v~iwd~~~~~-~~~~~~~h~~ 291 (321)
T 3ow8_A 225 -----SDDGYIKIYDV---QHANLAGTLSGHASWVLNVAFCPDDTHFVSSS--SDK--SVKVWDVGTRT-CVHTFFDHQD 291 (321)
T ss_dssp -----CTTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTS--CEEEEETTTTE-EEEEECCCSS
T ss_pred -----cCCCeEEEEEC---CCcceeEEEcCCCCceEEEEECCCCCEEEEEe--CCC--cEEEEeCCCCE-EEEEEcCCCC
Confidence 12235677775 32232 23434445577899999999877654 233 46666777631 11222221
Q ss_pred ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 345 VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
.+.. +.|+++|+.|+...
T Consensus 292 ~v~~---------v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 292 QVWG---------VKYNGNGSKIVSVG 309 (321)
T ss_dssp CEEE---------EEECTTSSEEEEEE
T ss_pred cEEE---------EEECCCCCEEEEEe
Confidence 2222 78999999876543
No 61
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.10 E-value=2.4e-07 Score=99.28 Aligned_cols=324 Identities=10% Similarity=0.004 Sum_probs=168.9
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEEC--CCCceEecccCCCc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA--ETGEAKPLFESPDI 83 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~--~~g~~~~lt~~~~~ 83 (595)
.|.+.|.. +++..... ..+.......|||||++|+... . . ..|.++|+ ++++...-.....
T Consensus 160 ~V~v~D~~----t~~~~~~i--~~g~~~~~v~~spdg~~l~v~~-~--------d-~~V~v~D~~~~t~~~~~~i~~g~- 222 (543)
T 1nir_A 160 QIALVDGD----SKKIVKVI--DTGYAVHISRMSASGRYLLVIG-R--------D-ARIDMIDLWAKEPTKVAEIKIGI- 222 (543)
T ss_dssp EEEEEETT----TCCEEEEE--ECSTTEEEEEECTTSCEEEEEE-T--------T-SEEEEEETTSSSCEEEEEEECCS-
T ss_pred eEEEEECC----CceEEEEE--ecCcccceEEECCCCCEEEEEC-C--------C-CeEEEEECcCCCCcEEEEEecCC-
Confidence 36777776 66554332 2222366788999999876554 2 2 67899999 6665432222111
Q ss_pred cccccccceEEec----CCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceE
Q 007620 84 CLNAVFGSFVWVN----NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (595)
Q Consensus 84 ~~~~~~~~~~Wsp----dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (595)
....+.+|| ||++|+..... ...+
T Consensus 223 ----~p~~va~sp~~~~dg~~l~v~~~~------------------------------------------------~~~v 250 (543)
T 1nir_A 223 ----EARSVESSKFKGYEDRYTIAGAYW------------------------------------------------PPQF 250 (543)
T ss_dssp ----EEEEEEECCSTTCTTTEEEEEEEE------------------------------------------------SSEE
T ss_pred ----CcceEEeCCCcCCCCCEEEEEEcc------------------------------------------------CCeE
Confidence 345789999 99998775210 1234
Q ss_pred EEEcC-CCCee-ecCC------------CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEec
Q 007620 160 VLGSL-DGTAK-DFGT------------PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELC 225 (595)
Q Consensus 160 ~~~d~-~g~~~-~lt~------------~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~ 225 (595)
.++|. ++++. .+.. ......+.+|||++.++++... ...|+++|..+.+...+.
T Consensus 251 ~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------------~g~i~vvd~~~~~~l~~~ 318 (543)
T 1nir_A 251 AIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------------TGKVLLVNYKDIDNLTVT 318 (543)
T ss_dssp EEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEECTTSSSCEEE
T ss_pred EEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------------CCeEEEEEecCCCcceeE
Confidence 44444 33322 1211 1134578899999988777532 247899998754321111
Q ss_pred cCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccC---cccc
Q 007620 226 DLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD---LRFR 302 (595)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~---~~~~ 302 (595)
..+. ......+.|+|||+. ++.. . ...+.+.++|. ..++........ ....
T Consensus 319 ~i~~-----------~~~~~~~~~spdg~~-l~va-~----------~~~~~v~v~D~---~tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 319 SIGA-----------APFLHDGGWDSSHRY-FMTA-A----------NNSNKVAVIDS---KDRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp EEEC-----------CSSCCCEEECTTSCE-EEEE-E----------GGGTEEEEEET---TTTEEEEEEECSSSBCCTT
T ss_pred Eecc-----------CcCccCceECCCCCE-EEEE-e----------cCCCeEEEEEC---CCCeEEEeeccCCCCCCCC
Confidence 1110 012356889999984 3322 1 12346777786 334443322211 1112
Q ss_pred ceee-cCCCcE-EEEEEeecccceEEEEEeCCCCCC---CcEEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCC-
Q 007620 303 SVSW-CDDSLA-LVNETWYKTSQTRTWLVCPGSKDV---APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND- 376 (595)
Q Consensus 303 ~~~w-spDg~~-l~~~~~~~~~~~~L~~~d~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~- 376 (595)
.+.| +|++.. ++... ..++ .|-++|.++... ..+++-...... .+...+.++|||+.||+...-..+
T Consensus 373 g~~~~~p~~g~~~~s~~-~~d~--~V~v~d~~~~~~~~~~~~~v~~l~~~g----~~~~~v~~~pdg~~l~v~~~~~~~~ 445 (543)
T 1nir_A 373 GANFVHPKYGPVWSTSH-LGDG--SISLIGTDPKNHPQYAWKKVAELQGQG----GGSLFIKTHPKSSHLYVDTTFNPDA 445 (543)
T ss_dssp CEEEEETTTEEEEEEEB-SSSS--EEEEEECCTTTCTTTBTSEEEEEECSC----SCCCCEECCTTCCEEEECCTTCSSH
T ss_pred CcccCCCCCccEEEecc-CCCc--eEEEEEeCCCCCchhcCeEEEEEEcCC----CCceEEEcCCCCCcEEEecCCCCCc
Confidence 2333 677544 44332 1122 566677765210 123221111100 122347889999998876411000
Q ss_pred -cccEEEEecCCCCCCCCcceeEeeecCCCcee-eeeecC----ccccceeeEEeeeCCCcccccccCCEEEEEEecC-C
Q 007620 377 -EQIYILLNGRGFTPEGNIPFLDLFDINTGSKE-RIWESN----REKYFETAVALVFGQGEEDINLNQLKILTSKESK-T 449 (595)
Q Consensus 377 -~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~-~l~~~~----~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~-~ 449 (595)
.... +..+|+++++.. .++... .......+.. ..|++||+.++++..+. .
T Consensus 446 ~~~~~----------------v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~~~~~g~~~~~s~~~~~~ 502 (543)
T 1nir_A 446 RISQS----------------VAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQ-------PEYNKRGDEVWFSVWNGKN 502 (543)
T ss_dssp HHHTC----------------EEEEETTCTTSCCEEECHHHHHCCCSSCCEEEE-------EEECSSSSEEEEEEECCTT
T ss_pred ccCce----------------EEEEECCCCCCCeEEeechhhcccCCCCCceEe-------ccCCCCCCEEEEEeecCCC
Confidence 0111 224577776643 222100 0000112221 46899999998876432 4
Q ss_pred CcceEEEEeCCCCceee
Q 007620 450 EITQYHILSWPLKKSSQ 466 (595)
Q Consensus 450 ~p~~l~~~d~~~~~~~~ 466 (595)
....|.++|..++++++
T Consensus 503 ~~~~i~v~D~~t~~~~~ 519 (543)
T 1nir_A 503 DSSALVVVDDKTLKLKA 519 (543)
T ss_dssp SCCEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCceEEE
Confidence 46789999988776654
No 62
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.09 E-value=2.2e-08 Score=100.38 Aligned_cols=152 Identities=11% Similarity=0.074 Sum_probs=89.9
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
..|++.|+. +++..+...+........+.|||||+++++... ....|+++|+++++...........
T Consensus 21 ~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~---------~~~~i~~~d~~t~~~~~~~~~~~~~ 87 (349)
T 1jmx_B 21 NNLHVVDVA----SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN---------HYGDIYGIDLDTCKNTFHANLSSVP 87 (349)
T ss_dssp TEEEEEETT----TTEEEEEEECSSCCSSCEEEECTTSSEEEEEET---------TTTEEEEEETTTTEEEEEEESCCST
T ss_pred CeEEEEECC----CCcEEEEEecCCCCCCceeEECCCCCEEEEEeC---------CCCcEEEEeCCCCcEEEEEEccccc
Confidence 468889987 666554433333114678999999987766542 3468999999988765433322100
Q ss_pred --ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEE
Q 007620 85 --LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (595)
Q Consensus 85 --~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (595)
....+..+.|+|||+.|++...... .. .+. +. .....|+++
T Consensus 88 ~~~~~~~~~~~~spdg~~l~~~~~~~~---------------------------~~-------~~~--~~-~~~~~i~~~ 130 (349)
T 1jmx_B 88 GEVGRSMYSFAISPDGKEVYATVNPTQ---------------------------RL-------NDH--YV-VKPPRLEVF 130 (349)
T ss_dssp TEEEECSSCEEECTTSSEEEEEEEEEE---------------------------EC-------SSC--EE-ECCCEEEEE
T ss_pred ccccccccceEECCCCCEEEEEccccc---------------------------cc-------ccc--cc-cCCCeEEEE
Confidence 0012457899999999888632100 00 000 00 013578888
Q ss_pred cC-CCCee----ecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEE
Q 007620 163 SL-DGTAK----DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR 222 (595)
Q Consensus 163 d~-~g~~~----~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~ 222 (595)
|+ +++.. .+..+.....++|||||+ |++.. .+++++|+.+++..
T Consensus 131 d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~---------------~~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 131 STADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAG---------------PDIYKMDVKTGKYT 179 (349)
T ss_dssp EGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEES---------------SSEEEECTTTCCEE
T ss_pred ECCCccccceeeeccCCCcccceeECCCCc-EEEcc---------------CcEEEEeCCCCcee
Confidence 88 44322 122223345678999999 66531 14889998866543
No 63
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.09 E-value=1.6e-07 Score=94.89 Aligned_cols=312 Identities=12% Similarity=0.025 Sum_probs=150.3
Q ss_pred CEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCC
Q 007620 43 KRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGP 122 (595)
Q Consensus 43 ~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~ 122 (595)
.+.+|+...... .++.-.+|.+|.++|+.+.++.. .. .....+.|+|||+.|++......
T Consensus 13 ~~~~~vg~y~~~---~~~~i~~~~~d~~~g~~~~~~~~-~~---~~p~~l~~spdg~~l~~~~~~~~------------- 72 (361)
T 3scy_A 13 ELTMLVGTYTSG---NSKGIYTFRFNEETGESLPLSDA-EV---ANPSYLIPSADGKFVYSVNEFSK------------- 72 (361)
T ss_dssp EEEEEEEECCSS---SCCEEEEEEEETTTCCEEEEEEE-EC---SCCCSEEECTTSSEEEEEECCSS-------------
T ss_pred ceEEEEEeccCC---CCCCEEEEEEeCCCCCEEEeecc-cC---CCCceEEECCCCCEEEEEEccCC-------------
Confidence 345566543211 02345677778888988777543 21 13467899999999888632100
Q ss_pred eeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC-CCeeecCC----CCeeeeeEECCCCCeEEEEEcccC
Q 007620 123 KIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GTAKDFGT----PAVYTAVEPSPDQKYVLITSMHRP 197 (595)
Q Consensus 123 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~lt~----~~~~~~~~~SpDg~~l~~~~~~~~ 197 (595)
+ . ..-.+|.++.. |+.+.+.. ......+++ ||++|+++....
T Consensus 73 -------~-----------------~------~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~- 119 (361)
T 3scy_A 73 -------D-----------------Q------AAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSG- 119 (361)
T ss_dssp -------T-----------------T------CEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTT-
T ss_pred -------C-----------------C------CcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCC-
Confidence 0 0 01234555553 55554421 222334555 899888775322
Q ss_pred ccccccCcccceeEEEEcCC-CceEEEecc---CCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccC
Q 007620 198 YSYKVPCARFSQKVQVWTTD-GKLVRELCD---LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVS 273 (595)
Q Consensus 198 ~~~~~~~~~~~~~l~~~d~~-g~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~ 273 (595)
..+.+|++. .+....+.. .......+. .........+.|+|||+. |+.. +.
T Consensus 120 -----------~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~spdg~~-l~~~---~~-------- 174 (361)
T 3scy_A 120 -----------GSITVFPIGQDGALLPASDVIEFKGSGPDKE--RQTMPHLHCVRITPDGKY-LLAD---DL-------- 174 (361)
T ss_dssp -----------TEEEEEEBCTTSCBCSCSEEEECCCCCSCTT--TCSSCCEEEEEECTTSSE-EEEE---ET--------
T ss_pred -----------CEEEEEEeCCCCcCcccceeEEccCCCCCcc--ccCCCcceEEEECCCCCE-EEEE---eC--------
Confidence 367788875 333222211 000000000 000001124789999984 4443 11
Q ss_pred CcceEEeccCCCCCCC----C-ce------ec-cccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEE
Q 007620 274 PRDIIYTQPAEPAEGE----K-PE------IL-HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (595)
Q Consensus 274 ~~~~~~~~d~~~~~g~----~-~~------~l-~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l 341 (595)
..+.+.+++++. .++ + .. .+ .........+.|+|||+.++.... ..+ .|.++++++ +..+.+
T Consensus 175 ~~~~v~v~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~~--~v~v~~~~~--g~~~~~ 248 (361)
T 3scy_A 175 GTDQIHKFNINP-NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE-IGG--TVIAFRYAD--GMLDEI 248 (361)
T ss_dssp TTTEEEEEEECT-TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-TTC--EEEEEEEET--TEEEEE
T ss_pred CCCEEEEEEEcC-CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC-CCC--eEEEEEecC--CceEEe
Confidence 123444444301 222 1 11 11 112223456899999987655431 122 566677665 333333
Q ss_pred eecccc-cccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccce
Q 007620 342 FDRVFE-NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 420 (595)
Q Consensus 342 ~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 420 (595)
...... .... +...+.|+|||++||+..... +....+| .++..+++.+.+...... .
T Consensus 249 ~~~~~~~~~~~--~~~~i~~spdg~~l~v~~~~~-~~~i~v~----------------~~~~~~g~~~~~~~~~~g---~ 306 (361)
T 3scy_A 249 QTVAADTVNAQ--GSGDIHLSPDGKYLYASNRLK-ADGVAIF----------------KVDETNGTLTKVGYQLTG---I 306 (361)
T ss_dssp EEEESCSSCCC--CEEEEEECTTSSEEEEEECSS-SCEEEEE----------------EECTTTCCEEEEEEEECS---S
T ss_pred EEEecCCCCCC--CcccEEECCCCCEEEEECCCC-CCEEEEE----------------EEcCCCCcEEEeeEecCC---C
Confidence 211100 0000 001278999999988765320 1122333 344445665444221100 0
Q ss_pred eeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCceeeEe
Q 007620 421 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 468 (595)
Q Consensus 421 ~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~~Lt 468 (595)
.+. ...|++|+++|++.... ..--.+|.+|..+++++.+.
T Consensus 307 ~~~-------~~~~spdg~~l~~~~~~-~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 307 HPR-------NFIITPNGKYLLVACRD-TNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp CCC-------EEEECTTSCEEEEEETT-TTEEEEEEECTTTCCEEECS
T ss_pred CCc-------eEEECCCCCEEEEEECC-CCCEEEEEEECCCCcEeecc
Confidence 111 24689999988776533 33334566787777765553
No 64
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.08 E-value=1e-07 Score=97.98 Aligned_cols=248 Identities=12% Similarity=0.096 Sum_probs=146.0
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|+|+|+. +|+...+........+....|||||+.||.... ...|.++++.+++.........
T Consensus 114 ~v~lw~~~----~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~--- 176 (401)
T 4aez_A 114 NVYVWNAD----SGSVSALAETDESTYVASVKWSHDGSFLSVGLG----------NGLVDIYDVESQTKLRTMAGHQ--- 176 (401)
T ss_dssp EEEEEETT----TCCEEEEEECCTTCCEEEEEECTTSSEEEEEET----------TSCEEEEETTTCCEEEEECCCS---
T ss_pred eEEEeeCC----CCcEeEeeecCCCCCEEEEEECCCCCEEEEECC----------CCeEEEEECcCCeEEEEecCCC---
Confidence 58899998 777766665444446889999999999887653 2467777988877544432221
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC
Q 007620 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 165 (595)
..+..+.| +++.|+.... ...|.++++.
T Consensus 177 -~~v~~~~~--~~~~l~~~~~-------------------------------------------------dg~i~i~d~~ 204 (401)
T 4aez_A 177 -ARVGCLSW--NRHVLSSGSR-------------------------------------------------SGAIHHHDVR 204 (401)
T ss_dssp -SCEEEEEE--ETTEEEEEET-------------------------------------------------TSEEEEEETT
T ss_pred -CceEEEEE--CCCEEEEEcC-------------------------------------------------CCCEEEEecc
Confidence 14667888 4555554321 1234445552
Q ss_pred -C-C-eeecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCcccccc
Q 007620 166 -G-T-AKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSV 240 (595)
Q Consensus 166 -g-~-~~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~ 240 (595)
+ . ...+. ....+..++|+|||+.|+....+ ..+.+||+.++.. ..+....
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------------~~v~iwd~~~~~~~~~~~~~~------------ 259 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND-------------NVVQIWDARSSIPKFTKTNHN------------ 259 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTCSSEEEEECCCS------------
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC-------------CeEEEccCCCCCccEEecCCc------------
Confidence 2 2 22232 23356689999999998877642 3688999886543 3332211
Q ss_pred ccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeec
Q 007620 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK 320 (595)
Q Consensus 241 ~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~ 320 (595)
.....+.|+|++...++.. ++ .....+.+++. ..++..........+..+.|+|++..++......
T Consensus 260 -~~v~~~~~~p~~~~ll~~~----~g------s~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 260 -AAVKAVAWCPWQSNLLATG----GG------TMDKQIHFWNA---ATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp -SCCCEEEECTTSTTEEEEE----CC------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEECSSSSEEEEEECTT
T ss_pred -ceEEEEEECCCCCCEEEEe----cC------CCCCEEEEEEC---CCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecC
Confidence 1235689999987533221 10 12346777786 3334444334455678899999999877653223
Q ss_pred ccceEEEEEeCCCCCCCcEEEe--ecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 321 TSQTRTWLVCPGSKDVAPRVLF--DRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 321 ~~~~~L~~~d~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
++ .|.++|+.++ ....+. ..... ....+.|+++|+.|+...
T Consensus 326 dg--~i~v~~~~~~--~~~~~~~~~~h~~------~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 326 DN--NLSIWSYSSS--GLTKQVDIPAHDT------RVLYSALSPDGRILSTAA 368 (401)
T ss_dssp TC--EEEEEEEETT--EEEEEEEEECCSS------CCCEEEECTTSSEEEEEC
T ss_pred CC--cEEEEecCCc--cceeEEEecCCCC------CEEEEEECCCCCEEEEEe
Confidence 34 4555666552 222221 11100 011278999999877654
No 65
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.05 E-value=9.2e-08 Score=96.32 Aligned_cols=248 Identities=8% Similarity=0.011 Sum_probs=145.0
Q ss_pred eeEEEecCCCCCCCCce-eeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 6 GIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~-~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.|.|+|+. +++.. .+.. ....+....|+|||+.|+.... ...|.++++.+++.........
T Consensus 55 ~i~vwd~~----~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~-- 116 (369)
T 3zwl_B 55 SASVWYSL----NGERLGTLDG--HTGTIWSIDVDCFTKYCVTGSA----------DYSIKLWDVSNGQCVATWKSPV-- 116 (369)
T ss_dssp CEEEEETT----TCCEEEEECC--CSSCEEEEEECTTSSEEEEEET----------TTEEEEEETTTCCEEEEEECSS--
T ss_pred EEEEEeCC----Cchhhhhhhh--cCCcEEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCcEEEEeecCC--
Confidence 47888887 45443 4432 2335889999999998877643 2567888999888665544333
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
.+..+.|+|+++.|+........ ....|.++++
T Consensus 117 ---~v~~~~~~~~~~~l~~~~~~~~~--------------------------------------------~~g~i~~~d~ 149 (369)
T 3zwl_B 117 ---PVKRVEFSPCGNYFLAILDNVMK--------------------------------------------NPGSINIYEI 149 (369)
T ss_dssp ---CEEEEEECTTSSEEEEEECCBTT--------------------------------------------BCCEEEEEEE
T ss_pred ---CeEEEEEccCCCEEEEecCCccC--------------------------------------------CCCEEEEEEe
Confidence 56789999999988876321000 0011222222
Q ss_pred ------------CC-Ceeec-CCCC--eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC-ceE-EEecc
Q 007620 165 ------------DG-TAKDF-GTPA--VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLV-RELCD 226 (595)
Q Consensus 165 ------------~g-~~~~l-t~~~--~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~-~~l~~ 226 (595)
.. ....+ .... ....++|+|||+.|++.... ..|.+||+.+ +.. ..+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 150 ERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-------------GKISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp EECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-------------SEEEEEETTTTTEEEEEEEC
T ss_pred cCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-------------CEEEEEECCCCcEeEEEEec
Confidence 11 11111 1111 45688999999998877542 3788999875 333 33322
Q ss_pred CCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceee
Q 007620 227 LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSW 306 (595)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~w 306 (595)
.. .....+.|+|++.. |+.. .....+.++|+ ..++.............+.|
T Consensus 217 ~~-------------~~v~~~~~~~~~~~-l~~~------------~~d~~i~v~d~---~~~~~~~~~~~~~~~~~~~~ 267 (369)
T 3zwl_B 217 HE-------------KSISDMQFSPDLTY-FITS------------SRDTNSFLVDV---STLQVLKKYETDCPLNTAVI 267 (369)
T ss_dssp CS-------------SCEEEEEECTTSSE-EEEE------------ETTSEEEEEET---TTCCEEEEEECSSCEEEEEE
T ss_pred CC-------------CceeEEEECCCCCE-EEEe------------cCCceEEEEEC---CCCceeeeecCCCCceeEEe
Confidence 11 11345889999873 3322 12246777786 33344443444556778899
Q ss_pred cCCCcEEEEEEeec----------ccceEEEEEeCCCCCCCcEEEee---cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 307 CDDSLALVNETWYK----------TSQTRTWLVCPGSKDVAPRVLFD---RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 307 spDg~~l~~~~~~~----------~~~~~L~~~d~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
+|++..++...... .+...+.++|+.++ +....+. ..+.. +.|+++|+.|+...
T Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~v~~---------~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 268 TPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE--EEIGRVQGHFGPLNT---------VAISPQGTSYASGG 334 (369)
T ss_dssp CSSSSEEEEEECCC-------------CEEEEEETTTC--CEEEEEECCSSCEEE---------EEECTTSSEEEEEE
T ss_pred cCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC--cchhheecccCcEEE---------EEECCCCCEEEEEc
Confidence 99999876653211 11225777777663 2222221 12222 78999999877654
No 66
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.04 E-value=3.5e-07 Score=94.04 Aligned_cols=292 Identities=11% Similarity=0.157 Sum_probs=152.3
Q ss_pred CcccceEEccCCC-EEEEEEecccccccCCCceEEEEEEC----CCCc-------eEecccCCCcc-----ccccccceE
Q 007620 31 AKINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADA----ETGE-------AKPLFESPDIC-----LNAVFGSFV 93 (595)
Q Consensus 31 ~~~~~~~~SPDG~-~laf~~~~~~~~~~~~~~~~L~v~d~----~~g~-------~~~lt~~~~~~-----~~~~~~~~~ 93 (595)
..+....|||||+ .||.... + ..|.++++ .+++ ...+....... ....+..+.
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~--------d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEK--------N--SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEET--------B--TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred CceEEEEECCCCCcEEEEecC--------C--ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 3588999999999 8776543 2 44555566 6665 23332211000 012467899
Q ss_pred EecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCC-eeecC
Q 007620 94 WVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFG 172 (595)
Q Consensus 94 Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~lt 172 (595)
|+|||+.|+....+ ..|.+++.+++ ...+.
T Consensus 116 ~s~~~~~l~~~~~d-------------------------------------------------g~i~i~~~~~~~~~~~~ 146 (425)
T 1r5m_A 116 WSHDGNSIVTGVEN-------------------------------------------------GELRLWNKTGALLNVLN 146 (425)
T ss_dssp ECTTSSEEEEEETT-------------------------------------------------SCEEEEETTSCEEEEEC
T ss_pred EcCCCCEEEEEeCC-------------------------------------------------CeEEEEeCCCCeeeecc
Confidence 99999988875211 12334444443 33333
Q ss_pred -CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcc---ccccccCCCCce
Q 007620 173 -TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVC---YNSVREGMRSIS 248 (595)
Q Consensus 173 -~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~ 248 (595)
....+..+.|+|++++|+..... ..+.+||+.+++................ ..........+.
T Consensus 147 ~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (425)
T 1r5m_A 147 FHRAPIVSVKWNKDGTHIISMDVE-------------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVE 213 (425)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETT-------------CCEEEEETTTTEEEEEECCC---------------CCCBSCCE
T ss_pred CCCccEEEEEECCCCCEEEEEecC-------------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEE
Confidence 23356689999999998877642 3688999876654332221110000000 000000034577
Q ss_pred eecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEEeecccceEEE
Q 007620 249 WRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTW 327 (595)
Q Consensus 249 wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~ 327 (595)
|++++. ++.. .....+++++. ..++.. .+......+..+.|+|++..|+... .++ .|.
T Consensus 214 ~~~~~~--~~~~------------~~~g~i~~~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~--~i~ 272 (425)
T 1r5m_A 214 WVDDDK--FVIP------------GPKGAIFVYQI---TEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS--DDG--TLR 272 (425)
T ss_dssp EEETTE--EEEE------------CGGGCEEEEET---TCSSCSEEECCCSSCEEEEEEETTTTEEEEEE--TTS--CEE
T ss_pred EcCCCE--EEEE------------cCCCeEEEEEc---CCCceeeeeccCCCceEEEEECCCCCEEEEEc--CCC--EEE
Confidence 888754 3222 12345677776 323333 3333445677899999998776653 223 577
Q ss_pred EEeCCCCCCCcEEEe--ecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCC
Q 007620 328 LVCPGSKDVAPRVLF--DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG 405 (595)
Q Consensus 328 ~~d~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g 405 (595)
++|+.+++ ....+. ...+.. +.|+++| .++.... ...+. .+|+.++
T Consensus 273 i~d~~~~~-~~~~~~~~~~~i~~---------~~~~~~~-~l~~~~~-----d~~i~----------------i~d~~~~ 320 (425)
T 1r5m_A 273 IWHGGNGN-SQNCFYGHSQSIVS---------ASWVGDD-KVISCSM-----DGSVR----------------LWSLKQN 320 (425)
T ss_dssp EECSSSBS-CSEEECCCSSCEEE---------EEEETTT-EEEEEET-----TSEEE----------------EEETTTT
T ss_pred EEECCCCc-cceEecCCCccEEE---------EEECCCC-EEEEEeC-----CCcEE----------------EEECCCC
Confidence 77877632 223332 112222 7899998 4444332 11222 3466666
Q ss_pred ceeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCC
Q 007620 406 SKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (595)
Q Consensus 406 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~ 462 (595)
+......... ..+.. ..|+++++.|+..... ..+.++++..+
T Consensus 321 ~~~~~~~~~~----~~i~~-------~~~s~~~~~l~~~~~d----g~i~i~~~~~~ 362 (425)
T 1r5m_A 321 TLLALSIVDG----VPIFA-------GRISQDGQKYAVAFMD----GQVNVYDLKKL 362 (425)
T ss_dssp EEEEEEECTT----CCEEE-------EEECTTSSEEEEEETT----SCEEEEECHHH
T ss_pred cEeEecccCC----ccEEE-------EEEcCCCCEEEEEECC----CeEEEEECCCC
Confidence 5444332211 11221 3578888876654422 45788887544
No 67
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.03 E-value=5.5e-08 Score=97.03 Aligned_cols=231 Identities=14% Similarity=0.107 Sum_probs=126.1
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc---eEecccCCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFESPD 82 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~---~~~lt~~~~ 82 (595)
.|.++++.. .+|+.+.+..+.........+|||||++|++.... ...|.++++..+. ..+......
T Consensus 61 ~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------~~~i~~~d~~~~~~~~~~~~~~~~~ 129 (343)
T 1ri6_A 61 RVLAYRIAP--DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN---------AGNVSVTRLEDGLPVGVVDVVEGLD 129 (343)
T ss_dssp EEEEEEECT--TTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT---------TTEEEEEEEETTEEEEEEEEECCCT
T ss_pred eEEEEEecC--CCCceeeccccccCCCCcEEEEcCCCCEEEEEecC---------CCeEEEEECCCCccccccccccCCC
Confidence 466666642 24565555444433357788999999998776532 3456666763332 222222111
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEE
Q 007620 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (595)
Q Consensus 83 ~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (595)
.+..+.|+|||+.|++.... ...|+++
T Consensus 130 -----~~~~~~~s~dg~~l~~~~~~------------------------------------------------~~~v~~~ 156 (343)
T 1ri6_A 130 -----GCHSANISPDNRTLWVPALK------------------------------------------------QDRICLF 156 (343)
T ss_dssp -----TBCCCEECTTSSEEEEEEGG------------------------------------------------GTEEEEE
T ss_pred -----CceEEEECCCCCEEEEecCC------------------------------------------------CCEEEEE
Confidence 35688999999988775210 1234455
Q ss_pred cC-C-CCeee-----cC--CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC--CceEEE---eccCC
Q 007620 163 SL-D-GTAKD-----FG--TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GKLVRE---LCDLP 228 (595)
Q Consensus 163 d~-~-g~~~~-----lt--~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~--g~~~~~---l~~~~ 228 (595)
++ + ++... +. .......++|+|||++|+++.... ..+.+|+++ +++... +...+
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~------------~~i~~~~~~~~~g~~~~~~~~~~~~ 224 (343)
T 1ri6_A 157 TVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN------------SSVDVWELKDPHGNIECVQTLDMMP 224 (343)
T ss_dssp EECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT------------TEEEEEESSCTTSCCEEEEEEECSC
T ss_pred EecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC------------CEEEEEEecCCCCcEEEEeeccccC
Confidence 55 2 43321 11 122345789999999998876322 367888874 444322 22221
Q ss_pred CCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecc--ccCccccceee
Q 007620 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSW 306 (595)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~--~~~~~~~~~~w 306 (595)
.. ..+ ......+.|+|||+. |+... .....+.+++. ...++..+.+. ........+.|
T Consensus 225 ~~------~~~-~~~~~~i~~s~dg~~-l~v~~-----------~~~~~i~v~d~-~~~~~~~~~~~~~~~~~~~~~~~~ 284 (343)
T 1ri6_A 225 EN------FSD-TRWAADIHITPDGRH-LYACD-----------RTASLITVFSV-SEDGSVLSKEGFQPTETQPRGFNV 284 (343)
T ss_dssp TT------CCS-CCCEEEEEECTTSSE-EEEEE-----------TTTTEEEEEEE-CTTSCCEEEEEEEECSSSCCCEEE
T ss_pred cc------ccc-cCCccceEECCCCCE-EEEEe-----------cCCCEEEEEEE-cCCCCceEEeeeecCCCccceEEE
Confidence 10 000 001124889999973 44331 11245666665 11133333332 22233678899
Q ss_pred cCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 307 CDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 307 spDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
+|||..++... ...+...+|.+|..+
T Consensus 285 s~dg~~l~~~~-~~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 285 DHSGKYLIAAG-QKSHHISVYEIVGEQ 310 (343)
T ss_dssp CTTSSEEEEEC-TTTCEEEEEEEETTT
T ss_pred CCCCCEEEEec-CCCCeEEEEEEcCCC
Confidence 99998766543 223455777778777
No 68
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.03 E-value=3e-07 Score=96.09 Aligned_cols=116 Identities=9% Similarity=-0.078 Sum_probs=68.1
Q ss_pred CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEE--eccCCCCccCCccccccccCCCCceeecC
Q 007620 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE--LCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (595)
Q Consensus 175 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (595)
.....++|+|||++|++... ...+++|++.++.... +.. +.+.......+.|+||
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~-------------~g~v~~~~~~~~~~~~~~~~~----------~~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADK-------------FGDVYSIDINSIPEEKFTQEP----------ILGHVSMLTDVHLIKD 206 (450)
T ss_dssp SCEEEEEECTTSSEEEEEET-------------TSEEEEEETTSCCCSSCCCCC----------SEECSSCEEEEEEEEC
T ss_pred CCceEEEEcCCCCEEEEEeC-------------CCcEEEEecCCccccccccee----------eecccCceEEEEEcCC
Confidence 34568999999999988753 2368888877544221 100 0111112346789999
Q ss_pred ---CCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-e-ccccCccccceeecCCCcEEEEEEeecccceEEE
Q 007620 253 ---KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-I-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTW 327 (595)
Q Consensus 253 ---g~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~-l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~ 327 (595)
++. |+.. .....+++|++ ..++.. . +......+..+.|+ |+..|+... .++ .|.
T Consensus 207 ~~~~~~-l~s~------------~~d~~i~vwd~---~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~--~d~--~v~ 265 (450)
T 2vdu_B 207 SDGHQF-IITS------------DRDEHIKISHY---PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG--GDD--KIF 265 (450)
T ss_dssp TTSCEE-EEEE------------ETTSCEEEEEE---SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE--SSS--EEE
T ss_pred CCCCcE-EEEE------------cCCCcEEEEEC---CCCceeeeeecCCCCceEEEEEC-CCCEEEEEe--CCC--eEE
Confidence 652 3322 11235677775 323332 2 22344567789999 998877654 223 677
Q ss_pred EEeCCCC
Q 007620 328 LVCPGSK 334 (595)
Q Consensus 328 ~~d~~~~ 334 (595)
++|+.++
T Consensus 266 vwd~~~~ 272 (450)
T 2vdu_B 266 AWDWKTG 272 (450)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 7888774
No 69
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.02 E-value=5.8e-07 Score=91.49 Aligned_cols=296 Identities=9% Similarity=0.056 Sum_probs=159.5
Q ss_pred cccceEEccCC-CEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEec-CCcEEEEEecCCC
Q 007620 32 KINFVSWSPDG-KRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSR 109 (595)
Q Consensus 32 ~~~~~~~SPDG-~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wsp-dg~~l~~~~~~~~ 109 (595)
.+....|+||| +.||.... ...|.++++.+++......... ....+..+.|+| +++.|+....
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~--- 139 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSK----------GGDIILWDYDVQNKTSFIQGMG--PGDAITGMKFNQFNTNQLFVSSI--- 139 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEB----------TSCEEEEETTSTTCEEEECCCS--TTCBEEEEEEETTEEEEEEEEET---
T ss_pred CEEEEEECCCCCCEEEEEcC----------CCeEEEEeCCCcccceeeecCC--cCCceeEEEeCCCCCCEEEEEeC---
Confidence 58899999999 66655542 2456677988877555433211 112567899999 5566655421
Q ss_pred CCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCC-CeeecCC----CCeeeeeEECC
Q 007620 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT----PAVYTAVEPSP 184 (595)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~lt~----~~~~~~~~~Sp 184 (595)
...|.++++.+ ..+.+.. ...+..++|+|
T Consensus 140 ----------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 140 ----------------------------------------------RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp ----------------------------------------------TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEET
T ss_pred ----------------------------------------------CCEEEEEECCCCceEEEeccCCCCCCeEEEEECC
Confidence 12344455533 2333221 12456899999
Q ss_pred CCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeec
Q 007620 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (595)
Q Consensus 185 Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d 264 (595)
|++.|+....+ ..+.+||+.+.....+.... .....+.|+|+++..++..
T Consensus 174 ~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~l~s~---- 223 (383)
T 3ei3_B 174 SRQMLATGDST-------------GRLLLLGLDGHEIFKEKLHK-------------AKVTHAEFNPRCDWLMATS---- 223 (383)
T ss_dssp TTTEEEEEETT-------------SEEEEEETTSCEEEEEECSS-------------SCEEEEEECSSCTTEEEEE----
T ss_pred CCCEEEEECCC-------------CCEEEEECCCCEEEEeccCC-------------CcEEEEEECCCCCCEEEEE----
Confidence 99988877542 37899999777666654321 1134688999987433332
Q ss_pred CCCcccccCCcceEEeccCCCCCC---CCceeccccCccccceeecC-CCcEEEEEEeecccceEEEEEeCCCCCCCcEE
Q 007620 265 RGDANVEVSPRDIIYTQPAEPAEG---EKPEILHKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (595)
Q Consensus 265 ~~~~~~~~~~~~~~~~~d~~~~~g---~~~~~l~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~ 340 (595)
.....+.++|+ .++ +...........+..+.|+| |+..|+.... ++ .|.++|+.+++ ....
T Consensus 224 --------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~--d~--~i~iwd~~~~~-~~~~ 288 (383)
T 3ei3_B 224 --------SVDATVKLWDL--RNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQ--RN--EIRVYSSYDWS-KPDQ 288 (383)
T ss_dssp --------ETTSEEEEEEG--GGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEES--SS--EEEEEETTBTT-SCSE
T ss_pred --------eCCCEEEEEeC--CCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcC--CC--cEEEEECCCCc-cccc
Confidence 11235666675 111 12222223455678899999 9988776542 23 67778887742 2233
Q ss_pred EeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccce
Q 007620 341 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 420 (595)
Q Consensus 341 l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 420 (595)
+...... ...........|+|++..+.+..... +. + ++. ....+..+|+.+++......... ..
T Consensus 289 ~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~s~d---g~-~--s~s------~d~~i~iwd~~~~~~~~~l~~~~---~~ 352 (383)
T 3ei3_B 289 IIIHPHR-QFQHLTPIKATWHPMYDLIVAGRYPD---DQ-L--LLN------DKRTIDIYDANSGGLVHQLRDPN---AA 352 (383)
T ss_dssp EEECCBC-CCTTSCCCCCEECSSSSEEEEECBCC---TT-T--CTT------CCCCEEEEETTTCCEEEEECBTT---BC
T ss_pred ccccccc-ccccccceEEeccCCCCceEEEecCC---cc-c--ccC------CCCeEEEEecCCCceeeeecCCC---CC
Confidence 3221110 00000111247888887766554321 11 1 110 01123346777776543332210 01
Q ss_pred eeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCC
Q 007620 421 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 460 (595)
Q Consensus 421 ~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~ 460 (595)
.... ...|++++..|+.. ++ ..+.+.+++
T Consensus 353 ~~~~------~~~~s~~g~~l~s~-sd----~~i~iw~~~ 381 (383)
T 3ei3_B 353 GIIS------LNKFSPTGDVLASG-MG----FNILIWNRE 381 (383)
T ss_dssp SCCC------EEEECTTSSEEEEE-ET----TEEEEEECC
T ss_pred ceEE------EEEEecCccEEEEe-cC----CcEEEEecC
Confidence 1111 12688888866544 32 557777764
No 70
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.01 E-value=1.5e-08 Score=102.97 Aligned_cols=199 Identities=12% Similarity=0.055 Sum_probs=115.2
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~ 112 (595)
+...+|||||++||..+.. ....|.++|+.+++......... .+.++.|+|||++|+....+
T Consensus 136 ~~~v~fSpDg~~la~as~~--------~d~~i~iwd~~~~~~~~~~~~~~-----~V~~v~fspdg~~l~s~s~~----- 197 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSK--------VPAIMRIIDPSDLTEKFEIETRG-----EVKDLHFSTDGKVVAYITGS----- 197 (365)
T ss_dssp EEEEEECTTSSCEEEEESC--------SSCEEEEEETTTTEEEEEEECSS-----CCCEEEECTTSSEEEEECSS-----
T ss_pred EEEEEEcCCCCEEEEEECC--------CCCEEEEeECCCCcEEEEeCCCC-----ceEEEEEccCCceEEeccce-----
Confidence 4457899999999886642 23567778999887655443332 56789999999988775210
Q ss_pred CCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecC---CCCeeeeeEECCCCC
Q 007620 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG---TPAVYTAVEPSPDQK 187 (595)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt---~~~~~~~~~~SpDg~ 187 (595)
.+.+++. +++. ...+ ....+..++|||||+
T Consensus 198 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 198 ---------------------------------------------SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp ---------------------------------------------CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred ---------------------------------------------eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 1122222 3321 1111 122456889999999
Q ss_pred eEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCC
Q 007620 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (595)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (595)
.++..+.... ....++.|++.......+..... .+.......+.|+|||+. |+..
T Consensus 233 ~l~~~s~d~~---------~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~V~~~~~Spdg~~-lasg------- 287 (365)
T 4h5i_A 233 VLIAASLKKG---------KGIVLTKISIKSGNTSVLRSKQV--------TNRFKGITSMDVDMKGEL-AVLA------- 287 (365)
T ss_dssp EEEEEEESSS---------CCEEEEEEEEETTEEEEEEEEEE--------ESSCSCEEEEEECTTSCE-EEEE-------
T ss_pred EEEEEecCCc---------ceeEEeecccccceecceeeeee--------cCCCCCeEeEEECCCCCc-eEEE-------
Confidence 9988765432 12356777766543322110000 000011345789999983 3322
Q ss_pred cccccCCcceEEeccCCCCCCCCce-ec-cccCccccceeecCCCcEEEEEEeecccceEEEEE
Q 007620 268 ANVEVSPRDIIYTQPAEPAEGEKPE-IL-HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLV 329 (595)
Q Consensus 268 ~~~~~~~~~~~~~~d~~~~~g~~~~-~l-~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~ 329 (595)
.....+.+||+ ..++.. .+ ......+..+.|||||+.|+..+. ++..+||-+
T Consensus 288 -----s~D~~V~iwd~---~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~--D~tvrvw~i 341 (365)
T 4h5i_A 288 -----SNDNSIALVKL---KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSA--ANTIHIIKL 341 (365)
T ss_dssp -----ETTSCEEEEET---TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEET--TSEEEEEEC
T ss_pred -----cCCCEEEEEEC---CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeC--CCeEEEEEc
Confidence 11235777786 333432 22 234556789999999999887652 343455544
No 71
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.00 E-value=9.3e-07 Score=96.33 Aligned_cols=218 Identities=9% Similarity=0.062 Sum_probs=123.9
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceE---ecccCCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK---PLFESPD 82 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~---~lt~~~~ 82 (595)
.+.|+++.+ +...+.++++. ..+...+|||||++||-... + ..|.++|+.+++.. .+.....
T Consensus 40 ~v~l~~~~~---~~~~~~~~~h~--~~v~~~~~spdg~~lasg~~--------d--~~v~lWd~~~~~~~~~~~~~~~~~ 104 (611)
T 1nr0_A 40 SVYTVPVGS---LTDTEIYTEHS--HQTTVAKTSPSGYYCASGDV--------H--GNVRIWDTTQTTHILKTTIPVFSG 104 (611)
T ss_dssp EEEEEETTC---SSCCEEECCCS--SCEEEEEECTTSSEEEEEET--------T--SEEEEEESSSTTCCEEEEEECSSS
T ss_pred EEEEecCCC---cccCeEecCCC--CceEEEEECCCCcEEEEEeC--------C--CCEEEeECCCCcceeeEeecccCC
Confidence 577888872 33444555433 35888999999998877653 2 34555687654422 2222222
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEE
Q 007620 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (595)
Q Consensus 83 ~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (595)
.+..+.|+|||+.|+...... . ....++++
T Consensus 105 -----~v~~v~fs~dg~~l~~~~~~~---------------------~------------------------~~~~v~~w 134 (611)
T 1nr0_A 105 -----PVKDISWDSESKRIAAVGEGR---------------------E------------------------RFGHVFLF 134 (611)
T ss_dssp -----CEEEEEECTTSCEEEEEECCS---------------------S------------------------CSEEEEET
T ss_pred -----ceEEEEECCCCCEEEEEECCC---------------------C------------------------ceeEEEEe
Confidence 567899999999988753210 0 01234444
Q ss_pred cCCCCeeecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCcccccc
Q 007620 163 SLDGTAKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSV 240 (595)
Q Consensus 163 d~~g~~~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~ 240 (595)
+.......+. ....+..++|+||+..++++.... ..+.+||...++. ..+...
T Consensus 135 d~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D------------~~v~lwd~~~~~~~~~l~~H------------- 189 (611)
T 1nr0_A 135 DTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD------------NTVAIFEGPPFKFKSTFGEH------------- 189 (611)
T ss_dssp TTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETT------------SCEEEEETTTBEEEEEECCC-------------
T ss_pred eCCCCcceecCCCCCceEEEECCCCCeEEEEEeCC------------CeEEEEECCCCeEeeeeccc-------------
Confidence 4311222222 223466899999998644443322 3678888776543 233221
Q ss_pred ccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-ecc-------ccCccccceeecCCCcE
Q 007620 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILH-------KLDLRFRSVSWCDDSLA 312 (595)
Q Consensus 241 ~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~-------~~~~~~~~~~wspDg~~ 312 (595)
......+.|+|||+. |+-. .....+.+|+. ..++.. .+. .....+..+.|+|||..
T Consensus 190 ~~~V~~v~fspdg~~-las~------------s~D~~i~lwd~---~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~ 253 (611)
T 1nr0_A 190 TKFVHSVRYNPDGSL-FAST------------GGDGTIVLYNG---VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK 253 (611)
T ss_dssp SSCEEEEEECTTSSE-EEEE------------ETTSCEEEEET---TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE
T ss_pred cCceEEEEECCCCCE-EEEE------------ECCCcEEEEEC---CCCcEeeeeccccccccccCCCEEEEEECCCCCE
Confidence 112346889999983 3222 11235666775 223332 221 23345678999999998
Q ss_pred EEEEEeecccceEEEEEeCCC
Q 007620 313 LVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 313 l~~~~~~~~~~~~L~~~d~~~ 333 (595)
|+... .++ .|.++|+.+
T Consensus 254 l~s~s--~D~--~v~lWd~~~ 270 (611)
T 1nr0_A 254 IASAS--ADK--TIKIWNVAT 270 (611)
T ss_dssp EEEEE--TTS--EEEEEETTT
T ss_pred EEEEe--CCC--eEEEEeCCC
Confidence 87654 223 466667776
No 72
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.99 E-value=3.5e-07 Score=94.01 Aligned_cols=228 Identities=14% Similarity=0.103 Sum_probs=122.2
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....|||||+.||.... + ..|.+++..+.....+..... .+..+.|+|+++.|+....+..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~--------d--g~i~i~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~-- 172 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVE--------N--GELRLWNKTGALLNVLNFHRA-----PIVSVKWNKDGTHIISMDVENV-- 172 (425)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCEEEEETTSCEEEEECCCCS-----CEEEEEECTTSSEEEEEETTCC--
T ss_pred ceEEEEEcCCCCEEEEEeC--------C--CeEEEEeCCCCeeeeccCCCc-----cEEEEEECCCCCEEEEEecCCe--
Confidence 5888999999999887653 2 346666755444555543333 5678999999998887532110
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCC-Ceee-----c-CCCCeeeeeEECC
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKD-----F-GTPAVYTAVEPSP 184 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~-----l-t~~~~~~~~~~Sp 184 (595)
. ..+ ++ . ....+..+.... .... . ........+.|+|
T Consensus 173 -----------i------------~iw-d~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (425)
T 1r5m_A 173 -----------T------------ILW-NV----I--------SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD 216 (425)
T ss_dssp -----------E------------EEE-ET----T--------TTEEEEEECCC---------------CCCBSCCEEEE
T ss_pred -----------E------------EEE-EC----C--------CCcEEEEeeccccCccceeeccccCCcceeeEEEEcC
Confidence 0 000 00 0 000111111100 0000 0 0111245788999
Q ss_pred CCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEee
Q 007620 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (595)
Q Consensus 185 Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~ 263 (595)
++. +++... ...+.+||+.+++. ..+.... .....+.|+|+++. |+..
T Consensus 217 ~~~-~~~~~~-------------~g~i~~~d~~~~~~~~~~~~~~-------------~~i~~~~~~~~~~~-l~~~--- 265 (425)
T 1r5m_A 217 DDK-FVIPGP-------------KGAIFVYQITEKTPTGKLIGHH-------------GPISVLEFNDTNKL-LLSA--- 265 (425)
T ss_dssp TTE-EEEECG-------------GGCEEEEETTCSSCSEEECCCS-------------SCEEEEEEETTTTE-EEEE---
T ss_pred CCE-EEEEcC-------------CCeEEEEEcCCCceeeeeccCC-------------CceEEEEECCCCCE-EEEE---
Confidence 865 443332 23788999876543 2222110 11245889999873 3322
Q ss_pred cCCCcccccCCcceEEeccCCCCCCCCc-eeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEe
Q 007620 264 DRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (595)
Q Consensus 264 d~~~~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~ 342 (595)
.....+.+++. ..++. ..+......+..+.|+|++ .++... .++ .|.++|+.++ +....+
T Consensus 266 ---------~~d~~i~i~d~---~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~--~d~--~i~i~d~~~~--~~~~~~ 326 (425)
T 1r5m_A 266 ---------SDDGTLRIWHG---GNGNSQNCFYGHSQSIVSASWVGDD-KVISCS--MDG--SVRLWSLKQN--TLLALS 326 (425)
T ss_dssp ---------ETTSCEEEECS---SSBSCSEEECCCSSCEEEEEEETTT-EEEEEE--TTS--EEEEEETTTT--EEEEEE
T ss_pred ---------cCCCEEEEEEC---CCCccceEecCCCccEEEEEECCCC-EEEEEe--CCC--cEEEEECCCC--cEeEec
Confidence 11235677775 32233 3343345567789999999 555443 223 6788888763 222222
Q ss_pred e---cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 343 D---RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 343 ~---~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
. ..+.. +.|+++|+.++...
T Consensus 327 ~~~~~~i~~---------~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 327 IVDGVPIFA---------GRISQDGQKYAVAF 349 (425)
T ss_dssp ECTTCCEEE---------EEECTTSSEEEEEE
T ss_pred ccCCccEEE---------EEEcCCCCEEEEEE
Confidence 2 12222 78999999877665
No 73
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.97 E-value=1.3e-07 Score=96.10 Aligned_cols=185 Identities=10% Similarity=0.025 Sum_probs=96.2
Q ss_pred eeEEEecCCCCCCCCceeeecC--CCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECC-CCceEecccCCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGY--PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE-TGEAKPLFESPD 82 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~--~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~-~g~~~~lt~~~~ 82 (595)
.||+.++.. .+|+...+... ..........|||||++|+.. .. . .|.+++++ +|+..++.....
T Consensus 15 ~i~~~~~d~--~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~-~~--------~--~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 15 AIFTVQFDD--EKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGA-AM--------K--KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEEEET--TTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEE-EB--------T--EEEEEEEEETTEEEEEEEEEC
T ss_pred cEEEEEEEC--CCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEE-cc--------c--eEEEEEECCCCCEEEeeEeec
Confidence 588877642 36666655432 122246788999999987544 32 2 56677765 677655432211
Q ss_pred ccccccccceEEecCCcEE-EEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEE
Q 007620 83 ICLNAVFGSFVWVNNSTLL-IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (595)
Q Consensus 83 ~~~~~~~~~~~Wspdg~~l-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (595)
. +....+.|+|||+.| ++..... .. . .+... .+..+ ....+|.
T Consensus 82 ~---g~~~~~~~spdg~~l~~~~~~~~--~~-----------~------------~~~~~-~~~~~-------g~v~v~~ 125 (365)
T 1jof_A 82 G---GHPRANDADTNTRAIFLLAAKQP--PY-----------A------------VYANP-FYKFA-------GYGNVFS 125 (365)
T ss_dssp C---SSGGGGCTTSCCEEEEEEECSST--TC-----------C------------EEEEE-ESSSC-------CEEEEEE
T ss_pred C---CCCccEEECCCCCEEEEEEecCC--cc-----------e------------eccce-eecCC-------ceEEEEc
Confidence 0 123468899999974 3442100 00 0 00000 00000 1123444
Q ss_pred EcCCCCee-ecC-----CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC-CceEEEeccCCCCccCC
Q 007620 162 GSLDGTAK-DFG-----TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAEDIP 234 (595)
Q Consensus 162 ~d~~g~~~-~lt-----~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~l~~~~~~~~~~ 234 (595)
++.+|+.. .+. .......+.|||||++|+++... ...|++|+++ +++...+.......
T Consensus 126 ~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~------------~~~v~~~~~~~~g~~~~~~~~~~~~--- 190 (365)
T 1jof_A 126 VSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT------------ANKLWTHRKLASGEVELVGSVDAPD--- 190 (365)
T ss_dssp ECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTSCEEEEEEEECSS---
T ss_pred cCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC------------CCEEEEEEECCCCCEEEeeeEecCC---
Confidence 44345432 221 22345688999999998766422 2368889887 66554432211000
Q ss_pred ccccccccCCCCceeecCCCeeEEEE
Q 007620 235 VCYNSVREGMRSISWRADKPSTLYWV 260 (595)
Q Consensus 235 ~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (595)
...+++.+.|+|||+. ||..
T Consensus 191 -----~g~~p~~~~~spdg~~-l~v~ 210 (365)
T 1jof_A 191 -----PGDHPRWVAMHPTGNY-LYAL 210 (365)
T ss_dssp -----TTCCEEEEEECTTSSE-EEEE
T ss_pred -----CCCCCCEeEECCCCCE-EEEE
Confidence 0012456889999983 5443
No 74
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.97 E-value=4.5e-07 Score=97.14 Aligned_cols=262 Identities=14% Similarity=0.098 Sum_probs=143.3
Q ss_pred eeEEEec--CCCCCCCCceeeecCCCCCcccceEEcc----CCCEEEEEEecccccccCCCceEEEEEECCCCceEeccc
Q 007620 6 GIGIHRL--LPDDSLGPEKEVHGYPDGAKINFVSWSP----DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (595)
Q Consensus 6 ~~~~~~~--~~~~~~g~~~~lt~~~~~~~~~~~~~SP----DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~ 79 (595)
.|.+.|+ . +++... .++.+.......||| ||++|+..... ...|.++|..+++..+...
T Consensus 201 ~V~v~D~~~~----t~~~~~--~i~~g~~p~~va~sp~~~~dg~~l~v~~~~---------~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 201 RIDMIDLWAK----EPTKVA--EIKIGIEARSVESSKFKGYEDRYTIAGAYW---------PPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp EEEEEETTSS----SCEEEE--EEECCSEEEEEEECCSTTCTTTEEEEEEEE---------SSEEEEEETTTCCEEEEEE
T ss_pred eEEEEECcCC----CCcEEE--EEecCCCcceEEeCCCcCCCCCEEEEEEcc---------CCeEEEEeccccccceeec
Confidence 4677788 4 443322 223444678889999 99987665422 3678888999888655433
Q ss_pred CCCccc-------cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceE
Q 007620 80 SPDICL-------NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFD 152 (595)
Q Consensus 80 ~~~~~~-------~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 152 (595)
...... ...+..+.+||+++.+++...
T Consensus 266 ~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~---------------------------------------------- 299 (543)
T 1nir_A 266 TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK---------------------------------------------- 299 (543)
T ss_dssp CCEECSSSCCEESCCCEEEEEECSSSSEEEEEET----------------------------------------------
T ss_pred ccCcccCccccccCCceEEEEECCCCCEEEEEEC----------------------------------------------
Confidence 211000 012346788888887666421
Q ss_pred EeecceEEEEcC-CCC-ee--ecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCC
Q 007620 153 YYTTAQLVLGSL-DGT-AK--DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP 228 (595)
Q Consensus 153 ~~~~~~l~~~d~-~g~-~~--~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~ 228 (595)
....|+++|+ +++ .+ .+........+.|+|||++++++.... ..|.+||+.+++........
T Consensus 300 --~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~------------~~v~v~D~~tg~l~~~i~~g 365 (543)
T 1nir_A 300 --ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNS------------NKVAVIDSKDRRLSALVDVG 365 (543)
T ss_dssp --TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGG------------TEEEEEETTTTEEEEEEECS
T ss_pred --CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCC------------CeEEEEECCCCeEEEeeccC
Confidence 0235667776 332 22 333334456789999999998776432 36889999877654432110
Q ss_pred CCccCCccccccccCCCCcee-ecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCC----CCc-eeccccCcccc
Q 007620 229 PAEDIPVCYNSVREGMRSISW-RADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG----EKP-EILHKLDLRFR 302 (595)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~w-spdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g----~~~-~~l~~~~~~~~ 302 (595)
..|- . .+...| +|++.. ++.... ...+.+.+++.++... .+. +.+........
T Consensus 366 ---~~ph------~-g~g~~~~~p~~g~-~~~s~~----------~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~ 424 (543)
T 1nir_A 366 ---KTPH------P-GRGANFVHPKYGP-VWSTSH----------LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSL 424 (543)
T ss_dssp ---SSBC------C-TTCEEEEETTTEE-EEEEEB----------SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC
T ss_pred ---CCCC------C-CCCcccCCCCCcc-EEEecc----------CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCce
Confidence 0000 0 122333 566432 432211 1123566667521100 121 22322233446
Q ss_pred ceeecCCCcEEEEEEeecc---cceEEEEEeCCCCCCCcEEE-e---------ecccccccCCCCCCCeeeCCCCCEEEE
Q 007620 303 SVSWCDDSLALVNETWYKT---SQTRTWLVCPGSKDVAPRVL-F---------DRVFENVYSDPGSPMMTRTSTGTNVIA 369 (595)
Q Consensus 303 ~~~wspDg~~l~~~~~~~~---~~~~L~~~d~~~~~~~~~~l-~---------~~~~~~~~~~~~~~~~~~~~dg~~l~~ 369 (595)
.+.++|||+.|+....... ....|.++|+++.+...+.| . ...+.. +.+++||+.+++
T Consensus 425 ~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~~~g~~~~~ 495 (543)
T 1nir_A 425 FIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQ---------PEYNKRGDEVWF 495 (543)
T ss_dssp CEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEE---------EEECSSSSEEEE
T ss_pred EEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEe---------ccCCCCCCEEEE
Confidence 6889999998776531111 12378899998854221333 1 111222 789999999998
Q ss_pred Eee
Q 007620 370 KIK 372 (595)
Q Consensus 370 ~~~ 372 (595)
...
T Consensus 496 s~~ 498 (543)
T 1nir_A 496 SVW 498 (543)
T ss_dssp EEE
T ss_pred Eee
Confidence 763
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.97 E-value=3.6e-07 Score=103.03 Aligned_cols=228 Identities=13% Similarity=0.124 Sum_probs=137.4
Q ss_pred ceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEe-cccCCCccccccccceEEecCCc
Q 007620 21 EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNST 99 (595)
Q Consensus 21 ~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~-lt~~~~~~~~~~~~~~~Wspdg~ 99 (595)
.+.++.... .+...+|||||++||.... ...|.++++.+++... +..... .+..+.|+|||+
T Consensus 6 ~~~~~~h~~--~v~~i~~sp~~~~la~~~~----------~g~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~s~~~~ 68 (814)
T 3mkq_A 6 KKTFSNRSD--RVKGIDFHPTEPWVLTTLY----------SGRVEIWNYETQVEVRSIQVTET-----PVRAGKFIARKN 68 (814)
T ss_dssp EEEEEEECS--CEEEEEECSSSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSS-----CEEEEEEEGGGT
T ss_pred ceeeecCCC--ceEEEEECCCCCEEEEEeC----------CCEEEEEECCCCceEEEEecCCC-----cEEEEEEeCCCC
Confidence 345554333 4889999999999988753 2567777988876443 332222 577899999999
Q ss_pred EEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC-eeecC-CCCe
Q 007620 100 LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAV 176 (595)
Q Consensus 100 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~-~~~lt-~~~~ 176 (595)
.|+.... ...|.++++ +++ ...+. ....
T Consensus 69 ~l~~~~~-------------------------------------------------dg~i~vw~~~~~~~~~~~~~~~~~ 99 (814)
T 3mkq_A 69 WIIVGSD-------------------------------------------------DFRIRVFNYNTGEKVVDFEAHPDY 99 (814)
T ss_dssp EEEEEET-------------------------------------------------TSEEEEEETTTCCEEEEEECCSSC
T ss_pred EEEEEeC-------------------------------------------------CCeEEEEECCCCcEEEEEecCCCC
Confidence 9888521 124555666 443 33333 3345
Q ss_pred eeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCc-eE-EEeccCCCCccCCccccccccCCCCceeec-CC
Q 007620 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LV-RELCDLPPAEDIPVCYNSVREGMRSISWRA-DK 253 (595)
Q Consensus 177 ~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-dg 253 (595)
+..++|||||++|+..... ..+.+||+.++ .. ..+.... .....+.|+| ++
T Consensus 100 v~~~~~s~~~~~l~~~~~d-------------g~i~vw~~~~~~~~~~~~~~~~-------------~~v~~~~~~p~~~ 153 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDD-------------LTVKLWNWENNWALEQTFEGHE-------------HFVMCVAFNPKDP 153 (814)
T ss_dssp EEEEEECSSSSEEEEEETT-------------SEEEEEEGGGTSEEEEEEECCS-------------SCEEEEEEETTEE
T ss_pred EEEEEEeCCCCEEEEEcCC-------------CEEEEEECCCCceEEEEEcCCC-------------CcEEEEEEEcCCC
Confidence 6789999999998876532 36888988754 33 3332211 1124578998 55
Q ss_pred CeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-ecccc-CccccceeecC--CCcEEEEEEeecccceEEEEE
Q 007620 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKL-DLRFRSVSWCD--DSLALVNETWYKTSQTRTWLV 329 (595)
Q Consensus 254 ~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~-~~~~~~~~wsp--Dg~~l~~~~~~~~~~~~L~~~ 329 (595)
. .++.. .....+.+++. ..+... .+... ...+..+.|+| ++..++... .++ .|.++
T Consensus 154 ~-~l~~~------------~~dg~v~vwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~dg--~i~~~ 213 (814)
T 3mkq_A 154 S-TFASG------------CLDRTVKVWSL---GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS--DDL--TIKIW 213 (814)
T ss_dssp E-EEEEE------------ETTSEEEEEET---TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC--TTS--EEEEE
T ss_pred C-EEEEE------------eCCCeEEEEEC---CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe--CCC--EEEEE
Confidence 4 23332 11235677775 322332 23222 25567889998 888776653 223 67778
Q ss_pred eCCCCCCCcEEEee-c--ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 330 CPGSKDVAPRVLFD-R--VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 330 d~~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
|+.++ +....+. + .+.. +.|+|+|+.++...
T Consensus 214 d~~~~--~~~~~~~~~~~~v~~---------~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 214 DYQTK--SCVATLEGHMSNVSF---------AVFHPTLPIIISGS 247 (814)
T ss_dssp ETTTT--EEEEEEECCSSCEEE---------EEECSSSSEEEEEE
T ss_pred ECCCC--cEEEEEcCCCCCEEE---------EEEcCCCCEEEEEe
Confidence 88763 2222222 1 2222 78999999776654
No 76
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.96 E-value=2.8e-07 Score=92.22 Aligned_cols=124 Identities=11% Similarity=0.008 Sum_probs=70.8
Q ss_pred ceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCC
Q 007620 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPK 114 (595)
Q Consensus 35 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~ 114 (595)
.+.++++++.+ ++.. ....|+++|+++++.......... .....+.|+|||+.|++....
T Consensus 4 g~~~~~~~~~~-v~~~---------~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~~~v~~~~------- 63 (349)
T 1jmx_B 4 GPALKAGHEYM-IVTN---------YPNNLHVVDVASDTVYKSCVMPDK---FGPGTAMMAPDNRTAYVLNNH------- 63 (349)
T ss_dssp CCCCCTTCEEE-EEEE---------TTTEEEEEETTTTEEEEEEECSSC---CSSCEEEECTTSSEEEEEETT-------
T ss_pred cccccCCCEEE-EEeC---------CCCeEEEEECCCCcEEEEEecCCC---CCCceeEECCCCCEEEEEeCC-------
Confidence 45677777543 3332 247899999998876544332220 024578999999987775210
Q ss_pred ccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCee-ecCCCC-------eeeeeEECCC
Q 007620 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA-------VYTAVEPSPD 185 (595)
Q Consensus 115 ~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~-~lt~~~-------~~~~~~~SpD 185 (595)
...|+++|+ +++.. .+.... ....++||||
T Consensus 64 -----------------------------------------~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd 102 (349)
T 1jmx_B 64 -----------------------------------------YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD 102 (349)
T ss_dssp -----------------------------------------TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred -----------------------------------------CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCC
Confidence 134666777 44432 222111 1347899999
Q ss_pred CCeEEEEEcccCccccccCcccceeEEEEcCCCce
Q 007620 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (595)
Q Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~ 220 (595)
|++|++......... ..+......+++||+.+++
T Consensus 103 g~~l~~~~~~~~~~~-~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 103 GKEVYATVNPTQRLN-DHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp SSEEEEEEEEEEECS-SCEEECCCEEEEEEGGGGG
T ss_pred CCEEEEEcccccccc-cccccCCCeEEEEECCCcc
Confidence 999998864310000 0000012479999987643
No 77
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.95 E-value=1.5e-07 Score=93.79 Aligned_cols=209 Identities=11% Similarity=0.144 Sum_probs=124.4
Q ss_pred eeEEEecCCCCCCCCc-eeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 6 GIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~-~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.|.|.|+. +++. +.+.. ....+....|||||++||.... ...|.++++.+++.........
T Consensus 103 ~i~lWd~~----~~~~~~~~~~--~~~~~~~~~~spdg~~l~~g~~----------dg~v~i~~~~~~~~~~~~~~~~-- 164 (321)
T 3ow8_A 103 HIRLWDLE----NGKQIKSIDA--GPVDAWTLAFSPDSQYLATGTH----------VGKVNIFGVESGKKEYSLDTRG-- 164 (321)
T ss_dssp EEEEEETT----TTEEEEEEEC--CTTCCCCEEECTTSSEEEEECT----------TSEEEEEETTTCSEEEEEECSS--
T ss_pred cEEEEECC----CCCEEEEEeC--CCccEEEEEECCCCCEEEEEcC----------CCcEEEEEcCCCceeEEecCCC--
Confidence 46778887 4443 34442 2224678999999999877542 3567777988876544322221
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
..+..+.|+|||+.|+....+ ..|.++|+
T Consensus 165 --~~v~~~~~spdg~~lasg~~d-------------------------------------------------g~i~iwd~ 193 (321)
T 3ow8_A 165 --KFILSIAYSPDGKYLASGAID-------------------------------------------------GIINIFDI 193 (321)
T ss_dssp --SCEEEEEECTTSSEEEEEETT-------------------------------------------------SCEEEEET
T ss_pred --ceEEEEEECCCCCEEEEEcCC-------------------------------------------------CeEEEEEC
Confidence 145689999999988875211 23445555
Q ss_pred -CCCe-eecCC-CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCcccccc
Q 007620 165 -DGTA-KDFGT-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSV 240 (595)
Q Consensus 165 -~g~~-~~lt~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~ 240 (595)
+++. ..+.. ...+..++|+|||+.|+....+ ..+.+||+.++.. ..+....
T Consensus 194 ~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~d-------------g~i~iwd~~~~~~~~~~~~h~------------ 248 (321)
T 3ow8_A 194 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDD-------------GYIKIYDVQHANLAGTLSGHA------------ 248 (321)
T ss_dssp TTTEEEEEECCCSSCCCEEEECTTSCEEEEECTT-------------SCEEEEETTTCCEEEEECCCS------------
T ss_pred CCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCC-------------CeEEEEECCCcceeEEEcCCC------------
Confidence 4432 23332 2245678999999988776532 3688999875543 3332211
Q ss_pred ccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc-eeccccCccccceeecCCCcEEEEEEee
Q 007620 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWY 319 (595)
Q Consensus 241 ~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~ 319 (595)
.....+.|+||++. |+.. .....+.+||+ ..++. ..+......+..+.|+|||..|+...
T Consensus 249 -~~v~~~~~sp~~~~-l~s~------------s~D~~v~iwd~---~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~-- 309 (321)
T 3ow8_A 249 -SWVLNVAFCPDDTH-FVSS------------SSDKSVKVWDV---GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG-- 309 (321)
T ss_dssp -SCEEEEEECTTSSE-EEEE------------ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--
T ss_pred -CceEEEEECCCCCE-EEEE------------eCCCcEEEEeC---CCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe--
Confidence 11345889999873 3322 11235677776 32232 23434455677899999998877654
Q ss_pred cccceEEE
Q 007620 320 KTSQTRTW 327 (595)
Q Consensus 320 ~~~~~~L~ 327 (595)
.++..+||
T Consensus 310 ~d~~i~vw 317 (321)
T 3ow8_A 310 DDQEIHIY 317 (321)
T ss_dssp TTCCEEEE
T ss_pred CCCeEEEE
Confidence 23433444
No 78
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.94 E-value=6.5e-07 Score=92.25 Aligned_cols=218 Identities=7% Similarity=0.015 Sum_probs=125.0
Q ss_pred cceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCC
Q 007620 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (595)
Q Consensus 34 ~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~ 113 (595)
...+|||||++|+.... ...|+++++.+++......... ......|++|++.|+....
T Consensus 60 ~~~~~s~~g~~l~~~~~----------d~~v~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~------- 117 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARL----------DGHDFLFNTIIRDGSKMLKRAD-----YTAVDTAKLQMRRFILGTT------- 117 (420)
T ss_dssp TTCEEEEEETTEEEEEE----------TTEEEEEECCSEETTTTSCSCC-----EEEEEEECSSSCEEEEEET-------
T ss_pred cceeeeecCCeEEEEEc----------CCcEEEEEecccceeeEEecCC-----ceEEEEEecCCCEEEEEEC-------
Confidence 47899999999887764 2567888887765443332221 2335578999998877521
Q ss_pred CccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeec--CCCCeeeeeEECCCCCeEE
Q 007620 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDF--GTPAVYTAVEPSPDQKYVL 190 (595)
Q Consensus 114 ~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~l--t~~~~~~~~~~SpDg~~l~ 190 (595)
...|.++++ .++...+ .....+..++|+|||+.|+
T Consensus 118 ------------------------------------------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 155 (420)
T 3vl1_A 118 ------------------------------------------EGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALI 155 (420)
T ss_dssp ------------------------------------------TSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEE
T ss_pred ------------------------------------------CCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEE
Confidence 123445565 3433333 2234567899999999888
Q ss_pred EEEcccCccccccCcccceeEEEEcCCCce-EEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcc
Q 007620 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (595)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (595)
....+ ..+.+||+.+++ ...+.... .....+.|+|+++. |+.. ..
T Consensus 156 s~s~d-------------~~i~iwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~-l~s~-~~------ 201 (420)
T 3vl1_A 156 SSSQD-------------MQLKIWSVKDGSNPRTLIGHR-------------ATVTDIAIIDRGRN-VLSA-SL------ 201 (420)
T ss_dssp EEETT-------------SEEEEEETTTCCCCEEEECCS-------------SCEEEEEEETTTTE-EEEE-ET------
T ss_pred EEeCC-------------CeEEEEeCCCCcCceEEcCCC-------------CcEEEEEEcCCCCE-EEEE-cC------
Confidence 77542 378999987543 34443211 11346889999873 3322 11
Q ss_pred cccCCcceEEeccCCCCCCCCcee-ccc------------------------cCccccceeecCCCcEEEEEEeecccce
Q 007620 270 VEVSPRDIIYTQPAEPAEGEKPEI-LHK------------------------LDLRFRSVSWCDDSLALVNETWYKTSQT 324 (595)
Q Consensus 270 ~~~~~~~~~~~~d~~~~~g~~~~~-l~~------------------------~~~~~~~~~wspDg~~l~~~~~~~~~~~ 324 (595)
...+.+||+ ..++... +.. .......+.|+||+..++... .++
T Consensus 202 -----d~~v~iwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg-- 269 (420)
T 3vl1_A 202 -----DGTIRLWEC---GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH--VSG-- 269 (420)
T ss_dssp -----TSCEEEEET---TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE--TTS--
T ss_pred -----CCcEEEeEC---CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc--CCC--
Confidence 123445554 2122111 110 123455688999998877653 223
Q ss_pred EEEEEeCCCCCCCcEEEee---cccccccCCCCCCCeeeCCCCC-EEEEEe
Q 007620 325 RTWLVCPGSKDVAPRVLFD---RVFENVYSDPGSPMMTRTSTGT-NVIAKI 371 (595)
Q Consensus 325 ~L~~~d~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~dg~-~l~~~~ 371 (595)
.|.++|+.+++ ....+.. ..+.. +.|+++|+ .++...
T Consensus 270 ~i~i~d~~~~~-~~~~~~~~~~~~v~~---------~~~~~~~~~~l~~g~ 310 (420)
T 3vl1_A 270 VITVHNVFSKE-QTIQLPSKFTCSCNS---------LTVDGNNANYIYAGY 310 (420)
T ss_dssp CEEEEETTTCC-EEEEECCTTSSCEEE---------EEECSSCTTEEEEEE
T ss_pred eEEEEECCCCc-eeEEcccccCCCcee---------EEEeCCCCCEEEEEe
Confidence 57777887741 1122211 11222 78999998 655443
No 79
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.93 E-value=4.9e-06 Score=81.94 Aligned_cols=193 Identities=14% Similarity=0.176 Sum_probs=116.6
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....|||||++||.... + ..|.++++.+++......... ..+..+.|+||++.|+....
T Consensus 25 ~v~~~~~s~~~~~l~s~~~--------d--g~i~iw~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~~~----- 85 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSA--------D--KLIKIWGAYDGKFEKTISGHK----LGISDVAWSSDSNLLVSASD----- 85 (312)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSEEEEEET-----
T ss_pred cEEEEEECCCCCEEEEeeC--------C--CeEEEEeCCCcccchhhccCC----CceEEEEEcCCCCEEEEECC-----
Confidence 5888999999998877653 2 346666887777544432221 15678999999998877521
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecC-CCCeeeeeEECCCCCe
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TPAVYTAVEPSPDQKY 188 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt-~~~~~~~~~~SpDg~~ 188 (595)
...|.++|+ +++. ..+. .......+.|+|+++.
T Consensus 86 --------------------------------------------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 121 (312)
T 4ery_A 86 --------------------------------------------DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 121 (312)
T ss_dssp --------------------------------------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred --------------------------------------------CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 123444555 3432 2332 2234567899999998
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCce-EEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCC
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (595)
|+....+ ..+.+||+.+++ ...+.... .....+.|+|+++. ++..
T Consensus 122 l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~-l~~~------- 167 (312)
T 4ery_A 122 IVSGSFD-------------ESVRIWDVKTGKCLKTLPAHS-------------DPVSAVHFNRDGSL-IVSS------- 167 (312)
T ss_dssp EEEEETT-------------SCEEEEETTTCCEEEEECCCS-------------SCEEEEEECTTSSE-EEEE-------
T ss_pred EEEEeCC-------------CcEEEEECCCCEEEEEecCCC-------------CcEEEEEEcCCCCE-EEEE-------
Confidence 8877542 368899987554 34433211 11235789999873 3222
Q ss_pred cccccCCcceEEeccCCCCCCCCc-eeccc-cCccccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 268 ANVEVSPRDIIYTQPAEPAEGEKP-EILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 268 ~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
.....+.++|. ..++. ..+.. .......+.|+|++..++... .++ .|.++|+.+
T Consensus 168 -----~~d~~i~~wd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~--~i~iwd~~~ 223 (312)
T 4ery_A 168 -----SYDGLCRIWDT---ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT--LDN--TLKLWDYSK 223 (312)
T ss_dssp -----ETTSCEEEEET---TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE--TTT--EEEEEETTT
T ss_pred -----eCCCcEEEEEC---CCCceeeEEeccCCCceEEEEECCCCCEEEEEc--CCC--eEEEEECCC
Confidence 11235667775 32232 22222 233456789999999877654 223 677788876
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.92 E-value=1.1e-06 Score=90.45 Aligned_cols=226 Identities=9% Similarity=0.032 Sum_probs=129.4
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|+++|+. +++..... ..........|+|||++||.... ...|.++++.+++...+.....
T Consensus 79 ~v~i~d~~----~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~h~--- 139 (420)
T 3vl1_A 79 HDFLFNTI----IRDGSKML--KRADYTAVDTAKLQMRRFILGTT----------EGDIKVLDSNFNLQREIDQAHV--- 139 (420)
T ss_dssp EEEEEECC----SEETTTTS--CSCCEEEEEEECSSSCEEEEEET----------TSCEEEECTTSCEEEEETTSSS---
T ss_pred cEEEEEec----ccceeeEE--ecCCceEEEEEecCCCEEEEEEC----------CCCEEEEeCCCcceeeeccccc---
Confidence 47777776 34333222 22234556689999999887653 2457777998887766532221
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-
Q 007620 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL- 164 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~- 164 (595)
..+..+.|+|+++.|+.... ...|.++|+
T Consensus 140 -~~v~~~~~~~~~~~l~s~s~-------------------------------------------------d~~i~iwd~~ 169 (420)
T 3vl1_A 140 -SEITKLKFFPSGEALISSSQ-------------------------------------------------DMQLKIWSVK 169 (420)
T ss_dssp -SCEEEEEECTTSSEEEEEET-------------------------------------------------TSEEEEEETT
T ss_pred -CccEEEEECCCCCEEEEEeC-------------------------------------------------CCeEEEEeCC
Confidence 15778999999998776521 124555666
Q ss_pred CC-CeeecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEE-EeccCCCCccCCc---c--
Q 007620 165 DG-TAKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPV---C-- 236 (595)
Q Consensus 165 ~g-~~~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~l~~~~~~~~~~~---~-- 236 (595)
++ ....+. ....+..++|+|||+.|+....+ ..+.+||+.+++.. .+........ +. .
T Consensus 170 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-------------~~v~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~ 235 (420)
T 3vl1_A 170 DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD-------------GTIRLWECGTGTTIHTFNRKENPHD-GVNSIALF 235 (420)
T ss_dssp TCCCCEEEECCSSCEEEEEEETTTTEEEEEETT-------------SCEEEEETTTTEEEEEECBTTBTTC-CEEEEEEE
T ss_pred CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC-------------CcEEEeECCCCceeEEeecCCCCCC-CccEEEEe
Confidence 44 333443 23456789999999998876542 36889998865543 3322110000 00 0
Q ss_pred -------ccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc-eeccc-cCccccceeec
Q 007620 237 -------YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHK-LDLRFRSVSWC 307 (595)
Q Consensus 237 -------~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~-~~~~~~~~~ws 307 (595)
..........+.|+|+++. |+.. .....+.++|+ ..++. ..+.. ....+..+.|+
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~------------~~dg~i~i~d~---~~~~~~~~~~~~~~~~v~~~~~~ 299 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKY-VIAG------------HVSGVITVHNV---FSKEQTIQLPSKFTCSCNSLTVD 299 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEE-EEEE------------ETTSCEEEEET---TTCCEEEEECCTTSSCEEEEEEC
T ss_pred cCCcceeeecccCcccceEEcCCCCE-EEEE------------cCCCeEEEEEC---CCCceeEEcccccCCCceeEEEe
Confidence 0000011245788899863 3222 11235667775 32232 22322 34457789999
Q ss_pred CCCc-EEEEEEeecccceEEEEEeCCCC
Q 007620 308 DDSL-ALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 308 pDg~-~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
|++. .++... .++ .|.++|+.++
T Consensus 300 ~~~~~~l~~g~--~dg--~i~vwd~~~~ 323 (420)
T 3vl1_A 300 GNNANYIYAGY--ENG--MLAQWDLRSP 323 (420)
T ss_dssp SSCTTEEEEEE--TTS--EEEEEETTCT
T ss_pred CCCCCEEEEEe--CCC--eEEEEEcCCC
Confidence 9998 666543 223 6777888774
No 81
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.92 E-value=9.4e-07 Score=91.77 Aligned_cols=119 Identities=8% Similarity=0.155 Sum_probs=66.4
Q ss_pred eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC-CceEEEeccCCCCccCCccccccccCCCCceeecCCC
Q 007620 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (595)
Q Consensus 176 ~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (595)
.+..++|+|||+.|+.. . . ..+.+||+. ++....+.... +..+.+.......+.|+|++.
T Consensus 179 ~v~~~~~~~~~~~l~s~-~-d------------~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~p~~~ 239 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-D-D------------LRINLWHLEITDRSFNIVDIK-----PANMEELTEVITAAEFHPNSC 239 (447)
T ss_dssp CCCEEEECTTSSEEEEE-C-S------------SEEEEEETTEEEEEEEEEECC-----CSSGGGCCCCEEEEEECSSCT
T ss_pred ceEEEEEcCCCCEEEEe-C-C------------CeEEEEECCCCCceeeeeecc-----cccccccCcceEEEEECCCCC
Confidence 45689999999988765 3 2 378899988 44333221110 001111112234688999983
Q ss_pred eeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc-----eeccccCc------------cccceeecCCCcEEEEEE
Q 007620 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-----EILHKLDL------------RFRSVSWCDDSLALVNET 317 (595)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~-----~~l~~~~~------------~~~~~~wspDg~~l~~~~ 317 (595)
..|+.. . ....+.++|+ ..++. ..+..... .+..+.|+|||..|+...
T Consensus 240 ~~l~s~-~-----------~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 304 (447)
T 3dw8_B 240 NTFVYS-S-----------SKGTIRLCDM---RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD 304 (447)
T ss_dssp TEEEEE-E-----------TTSCEEEEET---TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE
T ss_pred cEEEEE-e-----------CCCeEEEEEC---cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee
Confidence 334332 1 1235666675 32232 22322222 577899999999877653
Q ss_pred eecccceEEEEEeCCC
Q 007620 318 WYKTSQTRTWLVCPGS 333 (595)
Q Consensus 318 ~~~~~~~~L~~~d~~~ 333 (595)
. + .|.++|+..
T Consensus 305 ~---~--~v~iwd~~~ 315 (447)
T 3dw8_B 305 Y---L--SVKVWDLNM 315 (447)
T ss_dssp S---S--EEEEEETTC
T ss_pred C---C--eEEEEeCCC
Confidence 2 3 677778765
No 82
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.91 E-value=3.3e-07 Score=108.51 Aligned_cols=355 Identities=8% Similarity=-0.047 Sum_probs=178.1
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.+.+.|+. ++.............+....|||+|+.++.... ...|.++++.++..........
T Consensus 820 ~v~~~d~~----~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----------dg~v~vwd~~~~~~~~~~~~h~--- 882 (1249)
T 3sfz_A 820 KVLLFDIH----TSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS----------QYCVELWNIDSRLKVADCRGHL--- 882 (1249)
T ss_dssp EEEEEETT----TCCEEEEEECSSSSCCCEEEECSSTTEEEEECS----------SSCEEEEETTTTEEEEEECCCS---
T ss_pred cEEEEEec----CCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC----------CCeEEEEEcCCCceeeecCCCc---
Confidence 56778887 444333322233346888999999998877643 2457777888876544332221
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCcc------cc-----------CCCCeeeec-----------Cccccc--cc
Q 007620 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKT------MV-----------PLGPKIQSN-----------EQKNII--IS 135 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~------~~-----------~~g~~~~~~-----------~~g~~~--~~ 135 (595)
..+..+.|+|||+.|+....+..-...... .. +........ ..+... ..
T Consensus 883 -~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1249)
T 3sfz_A 883 -SWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPE 961 (1249)
T ss_dssp -SCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECC
T ss_pred -cceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEccc
Confidence 146789999999988776433211100000 00 000000000 000000 00
Q ss_pred ccccccccCcCCccceE-EeecceEEEEcC-CCCe-eecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeE
Q 007620 136 RMTDNLLKDEYDESLFD-YYTTAQLVLGSL-DGTA-KDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKV 211 (595)
Q Consensus 136 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~d~-~g~~-~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l 211 (595)
..+.. .....+...+. ......|.++++ +++. ..+. ....+..++|||||++|+....+ ..+
T Consensus 962 ~~i~~-~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-------------g~i 1027 (1249)
T 3sfz_A 962 AQVSC-CCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED-------------SVI 1027 (1249)
T ss_dssp SCEEE-EEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-------------SBE
T ss_pred CcEEE-EEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-------------CEE
Confidence 00000 00001111111 112345666666 4433 2232 22345678999999988876532 368
Q ss_pred EEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc
Q 007620 212 QVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP 291 (595)
Q Consensus 212 ~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~ 291 (595)
.+||+.++....+.... .....+.|++++. ++.. .....+.+++. .++...
T Consensus 1028 ~vwd~~~~~~~~~~~~~-------------~~v~~~~~~~~~~--l~~~------------~~dg~v~vwd~--~~~~~~ 1078 (1249)
T 3sfz_A 1028 QVWNWQTGDYVFLQAHQ-------------ETVKDFRLLQDSR--LLSW------------SFDGTVKVWNV--ITGRIE 1078 (1249)
T ss_dssp EEEETTTTEEECCBCCS-------------SCEEEEEECSSSE--EEEE------------ESSSEEEEEET--TTTCCC
T ss_pred EEEECCCCceEEEecCC-------------CcEEEEEEcCCCc--EEEE------------ECCCcEEEEEC--CCCcee
Confidence 89999887665443221 1123577888764 3222 12346777786 233233
Q ss_pred eeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCCCCEEEE
Q 007620 292 EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIA 369 (595)
Q Consensus 292 ~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~ 369 (595)
..+......+..+.|+||+..++.... ++ .|.++|+.++. ....+.. ..+.. +.|++||+.++.
T Consensus 1079 ~~~~~~~~~v~~~~~s~d~~~l~s~s~--d~--~v~iwd~~~~~-~~~~l~~h~~~v~~---------~~~s~dg~~lat 1144 (1249)
T 3sfz_A 1079 RDFTCHQGTVLSCAISSDATKFSSTSA--DK--TAKIWSFDLLS-PLHELKGHNGCVRC---------SAFSLDGILLAT 1144 (1249)
T ss_dssp EEEECCSSCCCCEEECSSSSSCEEECC--SS--CCCEECSSSSS-CSBCCCCCSSCEEE---------EEECSSSSEEEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEEcC--CC--cEEEEECCCcc-eeeeeccCCCcEEE---------EEECCCCCEEEE
Confidence 344445566788999999987766532 23 45566776632 2222221 11222 789999998776
Q ss_pred EeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEEecCC
Q 007620 370 KIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT 449 (595)
Q Consensus 370 ~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~ 449 (595)
...+ ....+| |+.+++.......... ..........-....|++|+..++.. .
T Consensus 1145 ~~~d---g~i~vw------------------d~~~~~~~~~~~~~~~--~~~~~~~~~~v~~l~fs~dg~~l~s~-~--- 1197 (1249)
T 3sfz_A 1145 GDDN---GEIRIW------------------NVSDGQLLHSCAPISV--EEGTATHGGWVTDVCFSPDSKTLVSA-G--- 1197 (1249)
T ss_dssp EETT---SCCCEE------------------ESSSSCCCCCCCCCC---------CCSCCCEEEECTTSSCEEEE-S---
T ss_pred EeCC---CEEEEE------------------ECCCCceEEEeccccc--cccccccCceEEEEEECCCCCEEEEC-C---
Confidence 5432 233343 5555543222100000 00000000000124689999877543 2
Q ss_pred CcceEEEEeCCCCce
Q 007620 450 EITQYHILSWPLKKS 464 (595)
Q Consensus 450 ~p~~l~~~d~~~~~~ 464 (595)
+.+.+.++..++.
T Consensus 1198 --g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1198 --GYLKWWNVATGDS 1210 (1249)
T ss_dssp --SSEEEBCSSSCBC
T ss_pred --CeEEEEECCCCce
Confidence 5788999877654
No 83
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.91 E-value=2.7e-06 Score=86.16 Aligned_cols=199 Identities=11% Similarity=0.111 Sum_probs=107.7
Q ss_pred eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCe
Q 007620 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (595)
Q Consensus 176 ~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~ 255 (595)
+...++|||||++|++.+... ...|.+||+.+++........ .....+.|+|||+.
T Consensus 135 ~~~~v~fSpDg~~la~as~~~-----------d~~i~iwd~~~~~~~~~~~~~-------------~~V~~v~fspdg~~ 190 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKV-----------PAIMRIIDPSDLTEKFEIETR-------------GEVKDLHFSTDGKV 190 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCS-----------SCEEEEEETTTTEEEEEEECS-------------SCCCEEEECTTSSE
T ss_pred CEEEEEEcCCCCEEEEEECCC-----------CCEEEEeECCCCcEEEEeCCC-------------CceEEEEEccCCce
Confidence 456789999999998876432 246889999876554322211 11356899999983
Q ss_pred eEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecc--ccCccccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 256 ~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
|+.. . .+.+.+++. .++....... .....+..+.|+|||..++...........++.+++..
T Consensus 191 -l~s~--s-----------~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~ 254 (365)
T 4h5i_A 191 -VAYI--T-----------GSSLEVIST--VTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKS 254 (365)
T ss_dssp -EEEE--C-----------SSCEEEEET--TTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET
T ss_pred -EEec--c-----------ceeEEEEEe--ccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccc
Confidence 3332 1 122333332 1332222222 22344678899999998766543323334566777655
Q ss_pred CCCCcEEE-----ee--cccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCc
Q 007620 334 KDVAPRVL-----FD--RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 406 (595)
Q Consensus 334 ~~~~~~~l-----~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~ 406 (595)
. ....+ .. ..+.. +.|+|||++|+....+ ...++ +|+.+++
T Consensus 255 ~--~~~~~~~~~~~~~~~~V~~---------~~~Spdg~~lasgs~D---~~V~i------------------wd~~~~~ 302 (365)
T 4h5i_A 255 G--NTSVLRSKQVTNRFKGITS---------MDVDMKGELAVLASND---NSIAL------------------VKLKDLS 302 (365)
T ss_dssp T--EEEEEEEEEEESSCSCEEE---------EEECTTSCEEEEEETT---SCEEE------------------EETTTTE
T ss_pred c--eecceeeeeecCCCCCeEe---------EEECCCCCceEEEcCC---CEEEE------------------EECCCCc
Confidence 2 22221 11 11222 7899999988766532 23334 4776665
Q ss_pred eeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCC
Q 007620 407 KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 460 (595)
Q Consensus 407 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~ 460 (595)
.......... ..+.. ..||||++.|+ +.+.. .-+.+.++.
T Consensus 303 ~~~~~~~gH~---~~V~~-------v~fSpdg~~la-S~S~D---~tvrvw~ip 342 (365)
T 4h5i_A 303 MSKIFKQAHS---FAITE-------VTISPDSTYVA-SVSAA---NTIHIIKLP 342 (365)
T ss_dssp EEEEETTSSS---SCEEE-------EEECTTSCEEE-EEETT---SEEEEEECC
T ss_pred EEEEecCccc---CCEEE-------EEECCCCCEEE-EEeCC---CeEEEEEcC
Confidence 4322111111 12222 47999998764 44332 236666664
No 84
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.90 E-value=1.1e-07 Score=97.87 Aligned_cols=239 Identities=11% Similarity=0.141 Sum_probs=123.2
Q ss_pred cccceEEccCCCEEEEEEeccccc-ccCCCceEEEEEECCCCceE-ecccCCCccccccccceEEecCCcEEEEEecCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEED-NVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~-~~~~~~~~L~v~d~~~g~~~-~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~ 109 (595)
.+...+|||||+.++++....... ........|.++++.+++.. .+..... ...+..+.|+||++.|+....+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d-- 88 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQV---DSKFNDLDWSHNNKIIAGALDN-- 88 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCC---SSCEEEEEECSSSSCEEEEESS--
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEec---CCceEEEEECCCCCeEEEEccC--
Confidence 467899999998555655221000 00001245777788876522 2211111 1256789999999988775221
Q ss_pred CCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-C---C--CeeecCC-CCeeeeeEE
Q 007620 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D---G--TAKDFGT-PAVYTAVEP 182 (595)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~---g--~~~~lt~-~~~~~~~~~ 182 (595)
..|.++++ . + ....+.. ...+..++|
T Consensus 89 -----------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 89 -----------------------------------------------GSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp -----------------------------------------------SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred -----------------------------------------------CeEEEeecccccccccchhhccCCccceEEEEE
Confidence 12333343 1 1 1222322 234568899
Q ss_pred CCC-CCeEEEEEcccCccccccCcccceeEEEEcCCCce------E-EEeccCCCCccCCccccccccCCCCceeecCCC
Q 007620 183 SPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL------V-RELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (595)
Q Consensus 183 SpD-g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~------~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (595)
+|+ ++.|+.... ...|.+||+.++. . ..+... .........+.|+|++.
T Consensus 122 ~~~~~~~l~s~~~-------------dg~v~iwd~~~~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~ 178 (416)
T 2pm9_A 122 NAKQDNVLASGGN-------------NGEIFIWDMNKCTESPSNYTPLTPGQS----------MSSVDEVISLAWNQSLA 178 (416)
T ss_dssp CSSSTTBEEEECS-------------SSCEEBCBTTTTSSCTTTCCCBCCCCS----------CCSSCCCCEEEECSSCT
T ss_pred cCCCCCEEEEEcC-------------CCeEEEEECCCCccccccccccccccc----------cCCCCCeeEEEeCCCCC
Confidence 999 666655542 2368899987654 1 111110 01112234688999954
Q ss_pred eeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCcee-cccc------CccccceeecCCCc-EEEEEEeecccceEE
Q 007620 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKL------DLRFRSVSWCDDSL-ALVNETWYKTSQTRT 326 (595)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~-l~~~------~~~~~~~~wspDg~-~l~~~~~~~~~~~~L 326 (595)
..++.. .....+.++|+ ..++... +... ...+..+.|+|++. .++.... +.....|
T Consensus 179 ~~l~~~------------~~dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~~~i 242 (416)
T 2pm9_A 179 HVFASA------------GSSNFASIWDL---KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG-SDNDPSI 242 (416)
T ss_dssp TEEEEE------------SSSSCEEEEET---TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC-CSSSCCC
T ss_pred cEEEEE------------cCCCCEEEEEC---CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEEC-CCCCceE
Confidence 333322 12235677775 3223322 2222 34567899999974 5554431 1111146
Q ss_pred EEEeCCCCCCCcEEEee--c--ccccccCCCCCCCeeeCC-CCCEEEEEe
Q 007620 327 WLVCPGSKDVAPRVLFD--R--VFENVYSDPGSPMMTRTS-TGTNVIAKI 371 (595)
Q Consensus 327 ~~~d~~~~~~~~~~l~~--~--~~~~~~~~~~~~~~~~~~-dg~~l~~~~ 371 (595)
.++|+.++. .+...+. + .+.. +.|+| +++.++...
T Consensus 243 ~~~d~~~~~-~~~~~~~~~~~~~v~~---------~~~s~~~~~~l~s~~ 282 (416)
T 2pm9_A 243 LIWDLRNAN-TPLQTLNQGHQKGILS---------LDWCHQDEHLLLSSG 282 (416)
T ss_dssp CEEETTSTT-SCSBCCCSCCSSCEEE---------EEECSSCSSCEEEEE
T ss_pred EEEeCCCCC-CCcEEeecCccCceeE---------EEeCCCCCCeEEEEe
Confidence 667877631 2221221 1 1222 78998 787766554
No 85
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.90 E-value=2e-07 Score=101.74 Aligned_cols=231 Identities=12% Similarity=0.047 Sum_probs=126.9
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCce-EecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~-~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~ 110 (595)
......|||||++||+... ..+.+.++.+++. ..++.... .+..+.|||||++|+-...+
T Consensus 20 ~~~~~~~spdg~~l~~~~~-----------~~v~l~~~~~~~~~~~~~~h~~-----~v~~~~~spdg~~lasg~~d--- 80 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCNG-----------TSVYTVPVGSLTDTEIYTEHSH-----QTTVAKTSPSGYYCASGDVH--- 80 (611)
T ss_dssp CCCCCEECTTSSEEEEEET-----------TEEEEEETTCSSCCEEECCCSS-----CEEEEEECTTSSEEEEEETT---
T ss_pred ceeEEeeCCCCCEEEeCCC-----------CEEEEecCCCcccCeEecCCCC-----ceEEEEECCCCcEEEEEeCC---
Confidence 4667889999999998651 3677778876654 44433333 56789999999988775221
Q ss_pred CCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC--ee-ecC-CCCeeeeeEECCC
Q 007620 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--AK-DFG-TPAVYTAVEPSPD 185 (595)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~--~~-~lt-~~~~~~~~~~SpD 185 (595)
..|.++|+ +++ .. .+. ....+..++||||
T Consensus 81 ----------------------------------------------~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~d 114 (611)
T 1nr0_A 81 ----------------------------------------------GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE 114 (611)
T ss_dssp ----------------------------------------------SEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT
T ss_pred ----------------------------------------------CCEEEeECCCCcceeeEeecccCCceEEEEECCC
Confidence 12333344 221 11 121 2234568999999
Q ss_pred CCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecC
Q 007620 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (595)
Q Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~ 265 (595)
|+.|+....... ....+++||... ....+. +.......+.|+|++...|+.. .
T Consensus 115 g~~l~~~~~~~~---------~~~~v~~wd~~~-~~~~l~-------------gh~~~v~~v~f~p~~~~~l~s~--s-- 167 (611)
T 1nr0_A 115 SKRIAAVGEGRE---------RFGHVFLFDTGT-SNGNLT-------------GQARAMNSVDFKPSRPFRIISG--S-- 167 (611)
T ss_dssp SCEEEEEECCSS---------CSEEEEETTTCC-BCBCCC-------------CCSSCEEEEEECSSSSCEEEEE--E--
T ss_pred CCEEEEEECCCC---------ceeEEEEeeCCC-Ccceec-------------CCCCCceEEEECCCCCeEEEEE--e--
Confidence 999988764321 023677777422 212221 1112234678999987434322 1
Q ss_pred CCcccccCCcceEEeccCCCCCCCCc-eeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEe-e
Q 007620 266 GDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF-D 343 (595)
Q Consensus 266 ~~~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~-~ 343 (595)
....+.+++. ..++. ..+......+..+.|+|||..|+... .++ .|.++|+.++ +....+ .
T Consensus 168 --------~D~~v~lwd~---~~~~~~~~l~~H~~~V~~v~fspdg~~las~s--~D~--~i~lwd~~~g--~~~~~~~~ 230 (611)
T 1nr0_A 168 --------DDNTVAIFEG---PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG--GDG--TIVLYNGVDG--TKTGVFED 230 (611)
T ss_dssp --------TTSCEEEEET---TTBEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTS--CEEEEETTTC--CEEEECBC
T ss_pred --------CCCeEEEEEC---CCCeEeeeeccccCceEEEEECCCCCEEEEEE--CCC--cEEEEECCCC--cEeeeecc
Confidence 1234566664 21222 22333445577899999999877654 234 4555676663 222222 1
Q ss_pred cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 344 RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
......--......+.|+|||+.|+...
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred ccccccccCCCEEEEEECCCCCEEEEEe
Confidence 0000000000001278999999876554
No 86
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.89 E-value=2e-07 Score=93.82 Aligned_cols=228 Identities=9% Similarity=0.077 Sum_probs=125.5
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+...+||||+ +|+..+ . + ..|.++|+.+++...............+..+.|+|||++|+....+
T Consensus 84 ~v~~~~~s~d~-~l~~~s-~-------d--g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---- 148 (344)
T 4gqb_B 84 GVADLTWVGER-GILVAS-D-------S--GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---- 148 (344)
T ss_dssp CEEEEEEETTT-EEEEEE-T-------T--SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT----
T ss_pred CEEEEEEeCCC-eEEEEE-C-------C--CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC----
Confidence 37788999997 455333 1 2 3466668877764332211000011246789999999988775211
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecC-CCCeeeeeEECCCCCe
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TPAVYTAVEPSPDQKY 188 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt-~~~~~~~~~~SpDg~~ 188 (595)
..|.++|+ +++. ..+. ....+..+.|+|++..
T Consensus 149 ---------------------------------------------~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 149 ---------------------------------------------ICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp ---------------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred ---------------------------------------------CeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 12444555 4432 2332 2335568899999987
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCC
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (595)
++++...+ ..|.+||+.+++. ..+.... . ......+.|+|++...++..
T Consensus 184 ~l~s~s~D------------~~v~iwd~~~~~~~~~~~~~~-~----------~~~~~~~~~~p~~~~~l~sg------- 233 (344)
T 4gqb_B 184 VFLSCSED------------NRILLWDTRCPKPASQIGCSA-P----------GYLPTSLAWHPQQSEVFVFG------- 233 (344)
T ss_dssp EEEEEETT------------SCEEEEETTSSSCEEECC---------------CCCEEEEEECSSCTTEEEEE-------
T ss_pred ceeeeccc------------cccccccccccceeeeeecce-e----------eccceeeeecCCCCcceEEe-------
Confidence 76665432 3688999875543 3332110 0 00123577888765433221
Q ss_pred cccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcE-EEEEEeecccceEEEEEeCCCCCCCcEEEee--c
Q 007620 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLA-LVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--R 344 (595)
Q Consensus 268 ~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~-l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~--~ 344 (595)
.....+.++|+ .++.....+......+..+.|+|||.. |+... .++ .|.++|+.++ +...+.. .
T Consensus 234 -----~~dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs--~D~--~i~vwd~~~~--~~~~~~~H~~ 300 (344)
T 4gqb_B 234 -----DENGTVSLVDT--KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS--EDC--SLAVLDSSLS--ELFRSQAHRD 300 (344)
T ss_dssp -----ETTSEEEEEES--CC--CCEEEECCSSCEEEEEECSSSSCCEEEEE--TTS--CEEEECTTCC--EEEEECCCSS
T ss_pred -----ccCCcEEEEEC--CCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe--CCC--eEEEEECCCC--cEEEEcCCCC
Confidence 11235777786 233233344444556778999999864 55543 223 4666688773 2222222 1
Q ss_pred ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 345 VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
.+.. +.|+|+|+.++++.
T Consensus 301 ~V~~---------v~~sp~~~~llas~ 318 (344)
T 4gqb_B 301 FVRD---------ATWSPLNHSLLTTV 318 (344)
T ss_dssp CEEE---------EEECSSSTTEEEEE
T ss_pred CEEE---------EEEeCCCCeEEEEE
Confidence 2333 78999998766554
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.89 E-value=9.1e-07 Score=95.93 Aligned_cols=224 Identities=10% Similarity=0.043 Sum_probs=128.7
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCC----c-eEecccCCCcccccc-ccceEEec--CCcEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----E-AKPLFESPDICLNAV-FGSFVWVN--NSTLLIF 103 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g----~-~~~lt~~~~~~~~~~-~~~~~Wsp--dg~~l~~ 103 (595)
.+....|||||++||+... ..|.+++++++ + ...+..... . +..+.|+| |++.|+.
T Consensus 20 ~v~~~~~spdg~~l~~~~~-----------~~v~v~~~~~~~~~~~~~~~~~~h~~-----~~v~~~~~sp~~~~~~l~s 83 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCG-----------KSAFVRCLDDGDSKVPPVVQFTGHGS-----SVVTTVKFSPIKGSQYLCS 83 (615)
T ss_dssp CCCCCEEETTTTEEEEEET-----------TEEEEEECCSSCCSSCSEEEECTTTT-----SCEEEEEECSSTTCCEEEE
T ss_pred ceeEEEECCCCCEEEEecC-----------CeEEEEECCCCCCccccceEEecCCC-----ceEEEEEECcCCCCCEEEE
Confidence 5788999999999999751 36777788877 4 444433332 5 77899999 9998887
Q ss_pred EecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CC------C---eeecC-
Q 007620 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG------T---AKDFG- 172 (595)
Q Consensus 104 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g------~---~~~lt- 172 (595)
...+ | .|.++++ ++ + ...+.
T Consensus 84 ~~~d----------------------g---------------------------~v~vw~~~~~~~~~~~~~~~~~~~~~ 114 (615)
T 1pgu_A 84 GDES----------------------G---------------------------KVIVWGWTFDKESNSVEVNVKSEFQV 114 (615)
T ss_dssp EETT----------------------S---------------------------EEEEEEEEEEGGGTEEEEEEEEEEEC
T ss_pred ecCC----------------------C---------------------------EEEEEeCCCCcccccccccccchhhc
Confidence 5321 1 1222222 11 0 11111
Q ss_pred CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecC
Q 007620 173 TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (595)
Q Consensus 173 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (595)
....+..++|+|||++|+........ ...+++|| .+.....+.... .....+.|+|+
T Consensus 115 ~~~~v~~~~~s~~~~~l~~~~~~~~~---------~~~v~~~d-~~~~~~~~~~~~-------------~~v~~~~~~~~ 171 (615)
T 1pgu_A 115 LAGPISDISWDFEGRRLCVVGEGRDN---------FGVFISWD-SGNSLGEVSGHS-------------QRINACHLKQS 171 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCSSC---------SEEEEETT-TCCEEEECCSCS-------------SCEEEEEECSS
T ss_pred ccccEEEEEEeCCCCEEEEeccCCCC---------ccEEEEEE-CCCcceeeecCC-------------ccEEEEEECCC
Confidence 22345688999999999988754321 24678888 333444432211 11345789999
Q ss_pred CCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-eccccCc---cccceeecCC-CcEEEEEEeecccceEEE
Q 007620 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDL---RFRSVSWCDD-SLALVNETWYKTSQTRTW 327 (595)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~---~~~~~~wspD-g~~l~~~~~~~~~~~~L~ 327 (595)
++..++.. .....+.+++. ..++.. .+..... .+..+.|+|| +..++.... ++ .|.
T Consensus 172 ~~~~l~~~------------~~d~~v~vwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg--~i~ 232 (615)
T 1pgu_A 172 RPMRSMTV------------GDDGSVVFYQG---PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS--DR--KIS 232 (615)
T ss_dssp SSCEEEEE------------ETTTEEEEEET---TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET--TC--CEE
T ss_pred CCcEEEEE------------eCCCcEEEEeC---CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC--CC--eEE
Confidence 87434332 12245677775 222222 2333334 5778999999 887776532 23 577
Q ss_pred EEeCCCCCCCcEEEe-e---cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 328 LVCPGSKDVAPRVLF-D---RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 328 ~~d~~~~~~~~~~l~-~---~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
++|+.++ +....+ . ... ..+ ..+.|+ +++.++...
T Consensus 233 vwd~~~~--~~~~~~~~~~~~~~-~~v-----~~~~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 233 CFDGKSG--EFLKYIEDDQEPVQ-GGI-----FALSWL-DSQKFATVG 271 (615)
T ss_dssp EEETTTC--CEEEECCBTTBCCC-SCE-----EEEEES-SSSEEEEEE
T ss_pred EEECCCC--CEeEEecccccccC-Cce-----EEEEEc-CCCEEEEEc
Confidence 7788773 322222 1 110 000 126788 888776654
No 88
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.86 E-value=4.9e-07 Score=92.91 Aligned_cols=256 Identities=11% Similarity=0.121 Sum_probs=133.7
Q ss_pred eeEEEecCCCCCCCCc-eeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCC----C-ceEeccc
Q 007620 6 GIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET----G-EAKPLFE 79 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~-~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~----g-~~~~lt~ 79 (595)
.|.|+|+. +++. +.+..+.....+....|||||+.||.... + ..|.++++.+ . ....+..
T Consensus 46 ~v~iw~~~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--------d--g~v~vw~~~~~~~~~~~~~~~~~ 111 (416)
T 2pm9_A 46 SLELWSLL----AADSEKPIASLQVDSKFNDLDWSHNNKIIAGALD--------N--GSLELYSTNEANNAINSMARFSN 111 (416)
T ss_dssp CCEEEESS----SGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEES--------S--SCEEEECCSSTTSCCCEEEECCC
T ss_pred eEEEEEcc----CCCCCcEEEEEecCCceEEEEECCCCCeEEEEcc--------C--CeEEEeecccccccccchhhccC
Confidence 48889987 4432 22322333446889999999999887653 2 3456667765 2 2333432
Q ss_pred CCCccccccccceEEecC-CcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecce
Q 007620 80 SPDICLNAVFGSFVWVNN-STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (595)
Q Consensus 80 ~~~~~~~~~~~~~~Wspd-g~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (595)
... .+..+.|+|+ ++.|+....+ ..
T Consensus 112 h~~-----~v~~~~~~~~~~~~l~s~~~d-------------------------------------------------g~ 137 (416)
T 2pm9_A 112 HSS-----SVKTVKFNAKQDNVLASGGNN-------------------------------------------------GE 137 (416)
T ss_dssp SSS-----CCCEEEECSSSTTBEEEECSS-------------------------------------------------SC
T ss_pred Ccc-----ceEEEEEcCCCCCEEEEEcCC-------------------------------------------------Ce
Confidence 222 5678999998 6666554211 12
Q ss_pred EEEEcC-CCC-------eeec----CCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEecc
Q 007620 159 LVLGSL-DGT-------AKDF----GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD 226 (595)
Q Consensus 159 l~~~d~-~g~-------~~~l----t~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~ 226 (595)
|.++|+ +++ ...+ ........++|+|++..++++... ...+.+||+.+++......
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------------dg~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS------------SNFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS------------SSCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC------------CCCEEEEECCCCCcceEEe
Confidence 223333 111 1111 112234578999995544445432 2368999998665433222
Q ss_pred CCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-ecc-ccCccccce
Q 007620 227 LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILH-KLDLRFRSV 304 (595)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~-~~~~~~~~~ 304 (595)
..... .+.......+.|+|++...++.. ..++. ...+.++|+ ..+.... .+. .....+..+
T Consensus 206 ~~~~~------~~~~~~v~~~~~~~~~~~~l~~~-~~d~~--------~~~i~~~d~--~~~~~~~~~~~~~~~~~v~~~ 268 (416)
T 2pm9_A 206 YTSPN------SGIKQQLSVVEWHPKNSTRVATA-TGSDN--------DPSILIWDL--RNANTPLQTLNQGHQKGILSL 268 (416)
T ss_dssp CCCCS------SCCCCCEEEEEECSSCTTEEEEE-ECCSS--------SCCCCEEET--TSTTSCSBCCCSCCSSCEEEE
T ss_pred ccccc------cccCCceEEEEECCCCCCEEEEE-ECCCC--------CceEEEEeC--CCCCCCcEEeecCccCceeEE
Confidence 11000 00001134688999986434332 11110 014555665 1221222 233 344567789
Q ss_pred eecC-CCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCC-CEEEEE
Q 007620 305 SWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG-TNVIAK 370 (595)
Q Consensus 305 ~wsp-Dg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~ 370 (595)
.|+| ++..|+.... ++ .|.++|+.++ +....+..... .+ ..+.|+|+| +.++..
T Consensus 269 ~~s~~~~~~l~s~~~--dg--~v~~wd~~~~--~~~~~~~~~~~-~v-----~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 269 DWCHQDEHLLLSSGR--DN--TVLLWNPESA--EQLSQFPARGN-WC-----FKTKFAPEAPDLFACA 324 (416)
T ss_dssp EECSSCSSCEEEEES--SS--EEEEECSSSC--CEEEEEECSSS-CC-----CCEEECTTCTTEEEEC
T ss_pred EeCCCCCCeEEEEeC--CC--CEEEeeCCCC--ccceeecCCCC-ce-----EEEEECCCCCCEEEEE
Confidence 9999 7877766542 23 6777888773 32222221110 01 128999999 555443
No 89
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.85 E-value=2.4e-06 Score=85.83 Aligned_cols=198 Identities=15% Similarity=0.218 Sum_probs=108.3
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceE--ecccCCCccccccccceEEecCCcEEEEEecCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK--PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~--~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~ 109 (595)
.+...+|||||+.||.... ++.-.|| ++.+++.. .+..... ...+..+.|+|||+.|+....+
T Consensus 18 ~v~~l~~sp~g~~las~~~--------D~~i~iw--~~~~~~~~~~~~~~~~h---~~~v~~~~~sp~g~~l~s~s~D-- 82 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGG--------DRRIRIW--GTEGDSWICKSVLSEGH---QRTVRKVAWSPCGNYLASASFD-- 82 (345)
T ss_dssp CEEEEEECTTSSCEEEEET--------TSCEEEE--EEETTEEEEEEEECSSC---SSCEEEEEECTTSSEEEEEETT--
T ss_pred cEEEEEECCCCCEEEEEcC--------CCeEEEE--EcCCCcceeeeeecccc---CCcEEEEEECCCCCEEEEEECC--
Confidence 4668899999999887653 3344455 66666422 1111111 1246789999999988775321
Q ss_pred CCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCC---eeecC-CCCeeeeeEECCC
Q 007620 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT---AKDFG-TPAVYTAVEPSPD 185 (595)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~lt-~~~~~~~~~~SpD 185 (595)
+ ...||.++ .++ ...+. ....+..++|+||
T Consensus 83 --------------------~-------------------------~v~iw~~~-~~~~~~~~~~~~h~~~v~~v~~sp~ 116 (345)
T 3fm0_A 83 --------------------A-------------------------TTCIWKKN-QDDFECVTTLEGHENEVKSVAWAPS 116 (345)
T ss_dssp --------------------S-------------------------CEEEEEEC-CC-EEEEEEECCCSSCEEEEEECTT
T ss_pred --------------------C-------------------------cEEEEEcc-CCCeEEEEEccCCCCCceEEEEeCC
Confidence 1 01122221 111 11222 2234568999999
Q ss_pred CCeEEEEEcccCccccccCcccceeEEEEcCCCce-EEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeec
Q 007620 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (595)
Q Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d 264 (595)
|++|+..+.+ ..+.+||+..+. ...+.... +.......+.|+|+++. |+.. .
T Consensus 117 ~~~l~s~s~D-------------~~v~iwd~~~~~~~~~~~~~~----------~h~~~v~~~~~~p~~~~-l~s~--s- 169 (345)
T 3fm0_A 117 GNLLATCSRD-------------KSVWVWEVDEEDEYECVSVLN----------SHTQDVKHVVWHPSQEL-LASA--S- 169 (345)
T ss_dssp SSEEEEEETT-------------SCEEEEEECTTSCEEEEEEEC----------CCCSCEEEEEECSSSSC-EEEE--E-
T ss_pred CCEEEEEECC-------------CeEEEEECCCCCCeEEEEEec----------CcCCCeEEEEECCCCCE-EEEE--e-
Confidence 9998877643 368888876442 22221111 00111345789999873 3322 1
Q ss_pred CCCcccccCCcceEEeccCCCCCCCCce---eccccCccccceeecCCCcEEEEEEeecccceEEEEEeC
Q 007620 265 RGDANVEVSPRDIIYTQPAEPAEGEKPE---ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (595)
Q Consensus 265 ~~~~~~~~~~~~~~~~~d~~~~~g~~~~---~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~ 331 (595)
....+.+++. ..++.. .+......+..+.|+|||..|+... .++..+||....
T Consensus 170 ---------~d~~i~~w~~---~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s--~D~~v~iW~~~~ 225 (345)
T 3fm0_A 170 ---------YDDTVKLYRE---EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS--DDRTVRIWRQYL 225 (345)
T ss_dssp ---------TTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEEEEC
T ss_pred ---------CCCcEEEEEe---cCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe--CCCeEEEecccc
Confidence 1224555554 222222 2333345577899999999887654 345567776543
No 90
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.84 E-value=7.7e-06 Score=81.90 Aligned_cols=224 Identities=12% Similarity=0.081 Sum_probs=121.5
Q ss_pred cccceEE-----cc-CCCEEEEEEecccccccCCCceEEEEEECCCCc-------e-EecccCCCccccccccceEEecC
Q 007620 32 KINFVSW-----SP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------A-KPLFESPDICLNAVFGSFVWVNN 97 (595)
Q Consensus 32 ~~~~~~~-----SP-DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~-------~-~~lt~~~~~~~~~~~~~~~Wspd 97 (595)
.+....| +| ||+.||-.+. ++.-.|| ++..++ + ..+..... .+..+.|+|+
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~--------D~~v~iW--d~~~~~~~~~~~~~~~~l~~h~~-----~V~~~~~~~~ 87 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSR--------DKTVMIW--KLYEEEQNGYFGIPHKALTGHNH-----FVSDLALSQE 87 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEET--------TSCEEEE--EECSSCCSSBSEEEEEEECCCSS-----CEEEEEECSS
T ss_pred hhhheeeEEEeecCCCCCEEEEEcC--------CCEEEEE--ECCcCCcccccccccchhccCCC-----ceEEEEECCC
Confidence 4677888 77 8987765442 3445555 554322 1 22222222 4678999999
Q ss_pred CcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC-eeecC-CC
Q 007620 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TP 174 (595)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~-~~~lt-~~ 174 (595)
++.|+....+ ..|.++|+ +++ ...+. ..
T Consensus 88 ~~~l~s~s~D-------------------------------------------------~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 88 NCFAISSSWD-------------------------------------------------KTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp TTEEEEEETT-------------------------------------------------SEEEEEETTSSCEEEEEECCC
T ss_pred CCEEEEEcCC-------------------------------------------------CcEEEEECCCCcEEEEEcCCC
Confidence 9987654211 23444555 443 22332 23
Q ss_pred CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCC
Q 007620 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (595)
Q Consensus 175 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (595)
..+..++|||||++|+....+ ..+.+||+.+.....+...... ......+.|+|++.
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d-------------~~i~~wd~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAE-------------REIKLWNILGECKFSSAEKENH----------SDWVSCVRYSPIMK 175 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETT-------------SCEEEEESSSCEEEECCTTTSC----------SSCEEEEEECCCCC
T ss_pred CcEEEEEECCCCCEEEEEcCC-------------CEEEEEeccCCceeeeecccCC----------Cceeeeeeeccccc
Confidence 356689999999998877542 3688999876554443221110 01123466777763
Q ss_pred e---------eEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceE
Q 007620 255 S---------TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTR 325 (595)
Q Consensus 255 ~---------~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 325 (595)
. .++.. .....+.+++. .+.....+......+..+.|+|||..|+... .++ .
T Consensus 176 ~~~~~~~~~~~l~s~------------~~d~~i~iwd~---~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs--~dg--~ 236 (343)
T 2xzm_R 176 SANKVQPFAPYFASV------------GWDGRLKVWNT---NFQIRYTFKAHESNVNHLSISPNGKYIATGG--KDK--K 236 (343)
T ss_dssp SCSCCCSSCCEEEEE------------ETTSEEEEEET---TTEEEEEEECCSSCEEEEEECTTSSEEEEEE--TTC--E
T ss_pred cccccCCCCCEEEEE------------cCCCEEEEEcC---CCceeEEEcCccccceEEEECCCCCEEEEEc--CCC--e
Confidence 1 12111 11235666664 3212222333445677899999999887754 223 5
Q ss_pred EEEEeCCCCCCCcEEE-eecccccccCCCCCCCeeeCCCCCEEEEE
Q 007620 326 TWLVCPGSKDVAPRVL-FDRVFENVYSDPGSPMMTRTSTGTNVIAK 370 (595)
Q Consensus 326 L~~~d~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~dg~~l~~~ 370 (595)
|.++|+.........+ ....+.. +.|+|+++.+...
T Consensus 237 v~iwd~~~~~~~~~~~~~~~~v~~---------v~~sp~~~~la~~ 273 (343)
T 2xzm_R 237 LLIWDILNLTYPQREFDAGSTINQ---------IAFNPKLQWVAVG 273 (343)
T ss_dssp EEEEESSCCSSCSEEEECSSCEEE---------EEECSSSCEEEEE
T ss_pred EEEEECCCCcccceeecCCCcEEE---------EEECCCCCEEEEE
Confidence 6667774321122222 1222333 7899999876543
No 91
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.84 E-value=3.7e-07 Score=91.84 Aligned_cols=217 Identities=12% Similarity=0.053 Sum_probs=122.6
Q ss_pred eeEEEecCCCCCCCCceeeec---CCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHG---YPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~---~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~ 82 (595)
.|.|+|+. +++...... ......+....|||||++||-.+. + ..|.++|+.+++..+......
T Consensus 104 ~v~lWd~~----~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~--------d--~~i~iwd~~~~~~~~~~~~h~ 169 (344)
T 4gqb_B 104 AVELWELD----ENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK--------D--ICIKVWDLAQQVVLSSYRAHA 169 (344)
T ss_dssp EEEEEEEC----TTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET--------T--SCEEEEETTTTEEEEEECCCS
T ss_pred EEEEEecc----CCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC--------C--CeEEEEECCCCcEEEEEcCcC
Confidence 36788887 454322211 112235888999999998876543 2 456666998887654432211
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEE
Q 007620 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (595)
Q Consensus 83 ~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (595)
..+..+.|+|+++.++.+... ...|.++
T Consensus 170 ----~~V~~~~~~~~~~~~l~s~s~------------------------------------------------D~~v~iw 197 (344)
T 4gqb_B 170 ----AQVTCVAASPHKDSVFLSCSE------------------------------------------------DNRILLW 197 (344)
T ss_dssp ----SCEEEEEECSSCTTEEEEEET------------------------------------------------TSCEEEE
T ss_pred ----CceEEEEecCCCCCceeeecc------------------------------------------------ccccccc
Confidence 146789999999765543210 1234455
Q ss_pred cC-CCC-eeecCC---CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCce-EEEeccCCCCccCCcc
Q 007620 163 SL-DGT-AKDFGT---PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVC 236 (595)
Q Consensus 163 d~-~g~-~~~lt~---~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~l~~~~~~~~~~~~ 236 (595)
|+ +++ ...+.. ......++|+|++..++++... ...|.+||+.+++ ...+...
T Consensus 198 d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~------------dg~v~~wd~~~~~~~~~~~~h--------- 256 (344)
T 4gqb_B 198 DTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE------------NGTVSLVDTKSTSCVLSSAVH--------- 256 (344)
T ss_dssp ETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET------------TSEEEEEESCC--CCEEEECC---------
T ss_pred cccccceeeeeecceeeccceeeeecCCCCcceEEecc------------CCcEEEEECCCCcEEEEEcCC---------
Confidence 66 443 333422 1234578999987666555432 2368899987554 3333321
Q ss_pred ccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEE
Q 007620 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNE 316 (595)
Q Consensus 237 ~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~ 316 (595)
......+.|+|||...|+-. .....+.+||. ..++...+......+..+.|+||+..++..
T Consensus 257 ----~~~v~~v~fsp~g~~~lasg------------s~D~~i~vwd~---~~~~~~~~~~H~~~V~~v~~sp~~~~llas 317 (344)
T 4gqb_B 257 ----SQCVTGLVFSPHSVPFLASL------------SEDCSLAVLDS---SLSELFRSQAHRDFVRDATWSPLNHSLLTT 317 (344)
T ss_dssp ----SSCEEEEEECSSSSCCEEEE------------ETTSCEEEECT---TCCEEEEECCCSSCEEEEEECSSSTTEEEE
T ss_pred ----CCCEEEEEEccCCCeEEEEE------------eCCCeEEEEEC---CCCcEEEEcCCCCCEEEEEEeCCCCeEEEE
Confidence 11234678999986434322 11235777886 444544444445567889999998754433
Q ss_pred EeecccceEEEEE
Q 007620 317 TWYKTSQTRTWLV 329 (595)
Q Consensus 317 ~~~~~~~~~L~~~ 329 (595)
.. .++...+|.+
T Consensus 318 ~s-~D~~v~~w~v 329 (344)
T 4gqb_B 318 VG-WDHQVVHHVV 329 (344)
T ss_dssp EE-TTSCEEEEEC
T ss_pred Ec-CCCeEEEEEC
Confidence 21 2344445544
No 92
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.83 E-value=6.8e-06 Score=82.23 Aligned_cols=223 Identities=9% Similarity=0.077 Sum_probs=124.5
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....|||||+.||-.+. + ..|.++|+.+++......... ..+..+.|+|+|+.|+....+
T Consensus 57 ~v~~~~~s~d~~~l~s~s~--------D--g~v~iWd~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~s~~~d---- 118 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQ--------D--GKLIIWDSYTTNKVHAIPLRS----SWVMTCAYAPSGNYVACGGLD---- 118 (340)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--TEEEEEETTTCCEEEEEECSS----SCEEEEEECTTSSEEEEEETT----
T ss_pred ceEEEEECCCCCEEEEEeC--------C--CcEEEEECCCCCcceEeecCC----ccEEEEEECCCCCEEEEEeCC----
Confidence 5888999999998766542 2 456666888776443322221 146688999999988775221
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CC--Ce---eecC-CCCeeeeeEECC
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--TA---KDFG-TPAVYTAVEPSP 184 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g--~~---~~lt-~~~~~~~~~~Sp 184 (595)
..+.++++ ++ .. +.+. .......+.|+|
T Consensus 119 ---------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 153 (340)
T 1got_B 119 ---------------------------------------------NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD 153 (340)
T ss_dssp ---------------------------------------------CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE
T ss_pred ---------------------------------------------CeEEEEECccCCCcceeEEEecCCCccEEEEEECC
Confidence 11222233 11 11 1121 223455778898
Q ss_pred CCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEee
Q 007620 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (595)
Q Consensus 185 Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~ 263 (595)
+++ |+..+. ...+.+||+.+++. ..+.... .....+.|+|+++. ++..
T Consensus 154 ~~~-l~s~s~-------------d~~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~-l~sg--- 202 (340)
T 1got_B 154 DNQ-IVTSSG-------------DTTCALWDIETGQQTTTFTGHT-------------GDVMSLSLAPDTRL-FVSG--- 202 (340)
T ss_dssp TTE-EEEEET-------------TSCEEEEETTTTEEEEEECCCS-------------SCEEEEEECTTSSE-EEEE---
T ss_pred CCc-EEEEEC-------------CCcEEEEECCCCcEEEEEcCCC-------------CceEEEEECCCCCE-EEEE---
Confidence 886 444432 23688999886654 3332211 11346789999873 2221
Q ss_pred cCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEe
Q 007620 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (595)
Q Consensus 264 d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~ 342 (595)
.....+.+||. ..+... .+......+..+.|+|++..|+... .++ .|.++|+.++ .....+
T Consensus 203 ---------~~d~~v~~wd~---~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s--~d~--~v~iwd~~~~--~~~~~~ 264 (340)
T 1got_B 203 ---------ACDASAKLWDV---REGMCRQTFTGHESDINAICFFPNGNAFATGS--DDA--TCRLFDLRAD--QELMTY 264 (340)
T ss_dssp ---------ETTSCEEEEET---TTCSEEEEECCCSSCEEEEEECTTSSEEEEEE--TTS--CEEEEETTTT--EEEEEE
T ss_pred ---------eCCCcEEEEEC---CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc--CCC--cEEEEECCCC--cEEEEE
Confidence 11235667775 323332 3334455677899999999877654 233 4666687663 222222
Q ss_pred ecc-cccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 343 DRV-FENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 343 ~~~-~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
... ... +...+.|+|+|+.++...
T Consensus 265 ~~~~~~~-----~v~~~~~s~~g~~l~~g~ 289 (340)
T 1got_B 265 SHDNIIC-----GITSVSFSKSGRLLLAGY 289 (340)
T ss_dssp CCTTCCS-----CEEEEEECTTSSEEEEEE
T ss_pred ccCCccc-----ceEEEEECCCCCEEEEEC
Confidence 111 000 001278999999877654
No 93
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.82 E-value=1.9e-07 Score=94.46 Aligned_cols=228 Identities=8% Similarity=0.079 Sum_probs=117.8
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+...+||||++.|+ .+ . ++ .|.++|+.+++...+...........+..+.|+|||+.|+....+
T Consensus 96 ~V~~~~~s~d~~~l~-~s-~-------dg--~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---- 160 (357)
T 4g56_B 96 GVTDVAWVSEKGILV-AS-D-------SG--AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---- 160 (357)
T ss_dssp CEEEEEEETTTEEEE-EE-T-------TS--CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT----
T ss_pred CEEEEEEcCCCCEEE-EE-C-------CC--EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC----
Confidence 478899999996543 22 1 23 455668777764333211100011246789999999988765211
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecCC-CCeeeeeEECCCCCe
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGT-PAVYTAVEPSPDQKY 188 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt~-~~~~~~~~~SpDg~~ 188 (595)
..|.++|+ +++. ..+.. ...+..++|+|+++.
T Consensus 161 ---------------------------------------------g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 161 ---------------------------------------------FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp ---------------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred ---------------------------------------------CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 12444555 3432 23322 234567899999986
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCc
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (595)
++++.... ..|.+||+.+++.......... ......+.|+|++...|+..
T Consensus 196 ~~~s~~~d------------g~v~~wd~~~~~~~~~~~~~~~----------~~~v~~v~~sp~~~~~la~g-------- 245 (357)
T 4g56_B 196 IFLSCGED------------GRILLWDTRKPKPATRIDFCAS----------DTIPTSVTWHPEKDDTFACG-------- 245 (357)
T ss_dssp CEEEEETT------------SCEEECCTTSSSCBCBCCCTTC----------CSCEEEEEECTTSTTEEEEE--------
T ss_pred eeeeeccC------------CceEEEECCCCceeeeeeeccc----------cccccchhhhhcccceEEEe--------
Confidence 65554322 3688899876543221111000 01123578899876433321
Q ss_pred ccccCCcceEEeccCCCCCCCCc-eeccccCccccceeecCCCcE-EEEEEeecccceEEEEEeCCCCCCCcEEEeec--
Q 007620 269 NVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLA-LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR-- 344 (595)
Q Consensus 269 ~~~~~~~~~~~~~d~~~~~g~~~-~~l~~~~~~~~~~~wspDg~~-l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~-- 344 (595)
.....+.++|+ ..++. +.+......+..+.|+||+.. |+... .++ .|.++|+.++ +......+
T Consensus 246 ----~~d~~i~~wd~---~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs--~D~--~i~iwd~~~~--~~~~~~~H~~ 312 (357)
T 4g56_B 246 ----DETGNVSLVNI---KNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS--EDC--TVAVLDADFS--EVFRDLSHRD 312 (357)
T ss_dssp ----ESSSCEEEEES---SCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE--TTS--CEEEECTTSC--EEEEECCCSS
T ss_pred ----ecccceeEEEC---CCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe--CCC--EEEEEECCCC--cEeEECCCCC
Confidence 11235667775 32232 334344456778999999854 55443 223 4666788773 22222221
Q ss_pred ccccccCCCCCCCeeeCC-CCCEEEEEe
Q 007620 345 VFENVYSDPGSPMMTRTS-TGTNVIAKI 371 (595)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~-dg~~l~~~~ 371 (595)
.+.. +.|+| |++.|+...
T Consensus 313 ~V~~---------vafsP~d~~~l~s~s 331 (357)
T 4g56_B 313 FVTG---------VAWSPLDHSKFTTVG 331 (357)
T ss_dssp CEEE---------EEECSSSTTEEEEEE
T ss_pred CEEE---------EEEeCCCCCEEEEEc
Confidence 2332 78998 787765443
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.82 E-value=2e-06 Score=85.60 Aligned_cols=190 Identities=7% Similarity=0.010 Sum_probs=110.0
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc----eEecccCCCccccccccceEEecCCc-EEEEEec
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFESPDICLNAVFGSFVWVNNST-LLIFTIP 106 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~----~~~lt~~~~~~~~~~~~~~~Wspdg~-~l~~~~~ 106 (595)
.+...+|||||+.|+.... ...|.++++.+++ .+.+..... .+..+.|+|+++ .|+....
T Consensus 13 ~v~~~~~s~~~~~l~~~~~----------d~~v~iw~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~ 77 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSW----------DGSLTVYKFDIQAKNVDLLQSLRYKH-----PLLCCNFIDNTDLQIYVGTV 77 (342)
T ss_dssp CEEEEEEEGGGTEEEEEET----------TSEEEEEEEETTTTEEEEEEEEECSS-----CEEEEEEEESSSEEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEcC----------CCeEEEEEeCCCCccccceeeeecCC-----ceEEEEECCCCCcEEEEEcC
Confidence 5888999999998877653 2456666776666 444443332 567899999999 7777521
Q ss_pred CCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CC-CeeecCC---CCeeeeeE
Q 007620 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGT---PAVYTAVE 181 (595)
Q Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g-~~~~lt~---~~~~~~~~ 181 (595)
...|.++++ .+ +...+.. ...+..+.
T Consensus 78 -------------------------------------------------dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~ 108 (342)
T 1yfq_A 78 -------------------------------------------------QGEILKVDLIGSPSFQALTNNEANLGICRIC 108 (342)
T ss_dssp -------------------------------------------------TSCEEEECSSSSSSEEECBSCCCCSCEEEEE
T ss_pred -------------------------------------------------CCeEEEEEeccCCceEeccccCCCCceEEEE
Confidence 123555565 43 4444433 33556889
Q ss_pred ECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC---------ceEEEeccCCCCccCCccccccccCCCCceeecC
Q 007620 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG---------KLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (595)
Q Consensus 182 ~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g---------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (595)
|+| ++.|+....+ ..+.+||+.+ ++. +.... .......+.|+++
T Consensus 109 ~~~-~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~--~~~~~-----------~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 109 KYG-DDKLIAASWD-------------GLIEVIDPRNYGDGVIAVKNLN--SNNTK-----------VKNKIFTMDTNSS 161 (342)
T ss_dssp EET-TTEEEEEETT-------------SEEEEECHHHHTTBCEEEEESC--SSSSS-----------SCCCEEEEEECSS
T ss_pred eCC-CCEEEEEcCC-------------CeEEEEcccccccccccccCCe--eeEEe-----------eCCceEEEEecCC
Confidence 999 8888776542 3688888753 221 11111 0011235677776
Q ss_pred CCeeEEEEEeecCCCcccccCCcceEEeccCCCCCC-CCc-e-e-ccccCccccceeecC-CCcEEEEEEeecccceEEE
Q 007620 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EKP-E-I-LHKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTW 327 (595)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g-~~~-~-~-l~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~L~ 327 (595)
+ ++.. .....+.++++ .. +.. . . .......+..+.|+| ++..++... .++...||
T Consensus 162 ~---l~~~------------~~d~~i~i~d~---~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~--~dg~i~i~ 221 (342)
T 1yfq_A 162 R---LIVG------------MNNSQVQWFRL---PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS--IDGRVAVE 221 (342)
T ss_dssp E---EEEE------------ESTTEEEEEES---SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE--TTSEEEEE
T ss_pred c---EEEE------------eCCCeEEEEEC---CccccccceeeecCCCCceeEEEECCCCCCEEEEEe--cCCcEEEE
Confidence 4 3222 12236777776 32 221 1 1 122344567889999 998777654 23544555
Q ss_pred EEeCC
Q 007620 328 LVCPG 332 (595)
Q Consensus 328 ~~d~~ 332 (595)
.++..
T Consensus 222 ~~~~~ 226 (342)
T 1yfq_A 222 FFDDQ 226 (342)
T ss_dssp ECCTT
T ss_pred EEcCC
Confidence 55544
No 95
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.81 E-value=3.6e-07 Score=96.01 Aligned_cols=140 Identities=8% Similarity=0.104 Sum_probs=79.1
Q ss_pred eeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCce--------EEEeccCCCCccCCccccccccCCCCce
Q 007620 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--------VRELCDLPPAEDIPVCYNSVREGMRSIS 248 (595)
Q Consensus 177 ~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 248 (595)
+..++|||||++|+....+ ..|.+||+.++. ...+.... .++...+..++
T Consensus 132 v~svafSPDG~~LAsgs~D-------------GtVkIWd~~~~~l~~~~~i~l~ti~~~~---------~gh~~~V~sVa 189 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNED-------------GELQFFSIRKNSENTPEFYFESSIRLSD---------AGSKDWVTHIV 189 (588)
T ss_dssp EEEEEECSSSSCEEEEETT-------------SEEEEEECCCCTTTCCCCEEEEEEECSC---------TTCCCCEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCC-------------CEEEEEECCCCccccccceeeeeeeccc---------ccccccEEEEE
Confidence 6689999999999988642 378899988764 23332111 00111134689
Q ss_pred eecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce----ecc-ccCccccceeecCCCcEEEEEEeecccc
Q 007620 249 WRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE----ILH-KLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (595)
Q Consensus 249 wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~----~l~-~~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (595)
|+||| ++.. .....+++|++ .+++.. .+. .....+..+.|+ |..++... .+
T Consensus 190 wSPdg---Laas------------s~D~tVrlWd~---~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~---~~- 245 (588)
T 2j04_A 190 WYEDV---LVAA------------LSNNSVFSMTV---SASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC---PG- 245 (588)
T ss_dssp EETTE---EEEE------------ETTCCEEEECC---CSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC---SS-
T ss_pred EcCCc---EEEE------------eCCCeEEEEEC---CCCccccceeeecccccCcEEEEEEE--CCEEEEEe---CC-
Confidence 99997 3222 11235677776 443432 232 233567889999 45565543 13
Q ss_pred eEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeee--CCCCCEEEEEe
Q 007620 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR--TSTGTNVIAKI 371 (595)
Q Consensus 324 ~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~dg~~l~~~~ 371 (595)
.|.++|+.++ ....+.-... +.+.+ +.+ ++||+.++...
T Consensus 246 -tIkLWd~~~~--~~~~~~~gh~-~~V~~-----va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 246 -YVHKIDLKNY--SISSLKTGSL-ENFHI-----IPLNHEKESTILLMSN 286 (588)
T ss_dssp -EEEEEETTTT--EEEEEECSCC-SCCCE-----EEETTCSSCEEEEECS
T ss_pred -eEEEEECCCC--eEEEEEcCCC-ceEEE-----EEeeeCCCCCEEEEEc
Confidence 6777888773 3222221111 11111 678 89987665544
No 96
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.81 E-value=4.3e-06 Score=83.72 Aligned_cols=239 Identities=11% Similarity=0.106 Sum_probs=132.4
Q ss_pred eeEEEecCCCCCCCCc-eeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCce-----Eeccc
Q 007620 6 GIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-----KPLFE 79 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~-~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~-----~~lt~ 79 (595)
.|.|+|+. +++. ..+.. ....+....|||||+.||.... ...+.++++.+++. +.+..
T Consensus 78 ~v~iWd~~----~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~----------d~~v~iw~~~~~~~~~~~~~~~~~ 141 (340)
T 1got_B 78 KLIIWDSY----TTNKVHAIPL--RSSWVMTCAYAPSGNYVACGGL----------DNICSIYNLKTREGNVRVSRELAG 141 (340)
T ss_dssp EEEEEETT----TCCEEEEEEC--SSSCEEEEEECTTSSEEEEEET----------TCEEEEEETTTCSBSCEEEEEEEC
T ss_pred cEEEEECC----CCCcceEeec--CCccEEEEEECCCCCEEEEEeC----------CCeEEEEECccCCCcceeEEEecC
Confidence 36677776 4433 33332 2235778899999998876543 24566667766431 12222
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceE
Q 007620 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (595)
Q Consensus 80 ~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (595)
... .+..+.|+++++ |+.... ...|
T Consensus 142 h~~-----~v~~~~~~~~~~-l~s~s~-------------------------------------------------d~~i 166 (340)
T 1got_B 142 HTG-----YLSCCRFLDDNQ-IVTSSG-------------------------------------------------DTTC 166 (340)
T ss_dssp CSS-----CEEEEEEEETTE-EEEEET-------------------------------------------------TSCE
T ss_pred CCc-----cEEEEEECCCCc-EEEEEC-------------------------------------------------CCcE
Confidence 121 456788998887 333211 1234
Q ss_pred EEEcC-CCC-eeecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCc
Q 007620 160 VLGSL-DGT-AKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPV 235 (595)
Q Consensus 160 ~~~d~-~g~-~~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~ 235 (595)
.++|+ +++ ...+. ....+..++|+||++.|+....+ ..+.+||+.++.. ..+....
T Consensus 167 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d-------------~~v~~wd~~~~~~~~~~~~h~------- 226 (340)
T 1got_B 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD-------------ASAKLWDVREGMCRQTFTGHE------- 226 (340)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCSEEEEECCCS-------
T ss_pred EEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCC-------------CcEEEEECCCCeeEEEEcCCc-------
Confidence 44555 343 22332 22345689999999987766532 3688999875543 3332211
Q ss_pred cccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCcee-cccc--CccccceeecCCCcE
Q 007620 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKL--DLRFRSVSWCDDSLA 312 (595)
Q Consensus 236 ~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~-l~~~--~~~~~~~~wspDg~~ 312 (595)
.....+.|+|++.. ++.. .....+.++|. ..++... +... ...+..+.|+|||..
T Consensus 227 ------~~v~~v~~~p~~~~-l~s~------------s~d~~v~iwd~---~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 284 (340)
T 1got_B 227 ------SDINAICFFPNGNA-FATG------------SDDATCRLFDL---RADQELMTYSHDNIICGITSVSFSKSGRL 284 (340)
T ss_dssp ------SCEEEEEECTTSSE-EEEE------------ETTSCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred ------CCEEEEEEcCCCCE-EEEE------------cCCCcEEEEEC---CCCcEEEEEccCCcccceEEEEECCCCCE
Confidence 11345789999873 3222 11235666775 3222221 2111 124567899999998
Q ss_pred EEEEEeecccceEEEEEeCCCCCCCcEEEeec--ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 313 LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 313 l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
++... .++ .|.++|+.+++ ....+..+ .+.. +.|+++|+.|+...
T Consensus 285 l~~g~--~d~--~i~vwd~~~~~-~~~~~~~h~~~v~~---------~~~s~dg~~l~s~s 331 (340)
T 1got_B 285 LLAGY--DDF--NCNVWDALKAD-RAGVLAGHDNRVSC---------LGVTDDGMAVATGS 331 (340)
T ss_dssp EEEEE--TTS--EEEEEETTTCC-EEEEEECCSSCEEE---------EEECTTSSCEEEEE
T ss_pred EEEEC--CCC--eEEEEEcccCc-EeeEeecCCCcEEE---------EEEcCCCCEEEEEc
Confidence 77654 223 57777876631 22223222 2222 78999998776554
No 97
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.79 E-value=4.1e-06 Score=83.02 Aligned_cols=225 Identities=10% Similarity=0.096 Sum_probs=122.9
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCC---c-eEecccCCCccccccccceEEecCCcEEEEEecC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG---E-AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g---~-~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~ 107 (595)
.+....|+|++..++++... ++.-.||-+..... . .+.+..... .+..+.|+|||+.|+....+
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~-------D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASR-------DKTLISWKLTGDDQKFGVPVRSFKGHSH-----IVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp CEEEEEECSSCTTEEEEEET-------TSEEEEEEEEEETTEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEccCCCccEEEEecC-------CccEEEecCCCCCccccccceEEeCCcc-----cEEEEEECCCCCEEEEEeCC
Confidence 47788999987555555543 34455554432111 1 122222222 46688999999987765211
Q ss_pred CCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC-eeecC-CCCeeeeeEECC
Q 007620 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVYTAVEPSP 184 (595)
Q Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~-~~~lt-~~~~~~~~~~Sp 184 (595)
..|.++|+ +++ .+.+. ....+..++|+|
T Consensus 87 -------------------------------------------------~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 117 (319)
T 3frx_A 87 -------------------------------------------------KTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117 (319)
T ss_dssp -------------------------------------------------SEEEEEETTTTEEEEEEECCSSCEEEEEECT
T ss_pred -------------------------------------------------CEEEEEECCCCCeeEEEccCCCcEEEEEEcC
Confidence 23444555 443 22332 233456889999
Q ss_pred CCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCe---eEEEEE
Q 007620 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS---TLYWVE 261 (595)
Q Consensus 185 Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~---~l~~~~ 261 (595)
+++.|+..+.+ ..+.+||+.+.....+.... .....+.|+|.+.. ...++.
T Consensus 118 ~~~~l~s~s~D-------------~~i~vwd~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~~~~~~l~s 171 (319)
T 3frx_A 118 KASMIISGSRD-------------KTIKVWTIKGQCLATLLGHN-------------DWVSQVRVVPNEKADDDSVTIIS 171 (319)
T ss_dssp TSCEEEEEETT-------------SCEEEEETTSCEEEEECCCS-------------SCEEEEEECCC------CCEEEE
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCeEEEEeccC-------------CcEEEEEEccCCCCCCCccEEEE
Confidence 99988877642 36888999877665553221 11223555554321 011111
Q ss_pred eecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEE
Q 007620 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (595)
Q Consensus 262 ~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~ 340 (595)
. .....+.++++ ..++.. .+......+..+.|+|||..|+... .++ .|.++|+.++ +...
T Consensus 172 ~----------~~d~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~--~dg--~i~iwd~~~~--~~~~ 232 (319)
T 3frx_A 172 A----------GNDKMVKAWNL---NQFQIEADFIGHNSNINTLTASPDGTLIASAG--KDG--EIMLWNLAAK--KAMY 232 (319)
T ss_dssp E----------ETTSCEEEEET---TTTEEEEEECCCCSCEEEEEECTTSSEEEEEE--TTC--EEEEEETTTT--EEEE
T ss_pred E----------eCCCEEEEEEC---CcchhheeecCCCCcEEEEEEcCCCCEEEEEe--CCC--eEEEEECCCC--cEEE
Confidence 1 11235666675 322222 2333445577889999999877654 223 5777788763 2221
Q ss_pred Eee--cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 341 LFD--RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 341 l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
.+. ..+.. +.|+|+|..++...
T Consensus 233 ~~~~~~~v~~---------~~~sp~~~~la~~~ 256 (319)
T 3frx_A 233 TLSAQDEVFS---------LAFSPNRYWLAAAT 256 (319)
T ss_dssp EEECCSCEEE---------EEECSSSSEEEEEE
T ss_pred EecCCCcEEE---------EEEcCCCCEEEEEc
Confidence 121 12222 78999999876654
No 98
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.79 E-value=7.3e-06 Score=80.56 Aligned_cols=230 Identities=13% Similarity=0.135 Sum_probs=127.2
Q ss_pred eeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEE
Q 007620 22 KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLL 101 (595)
Q Consensus 22 ~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l 101 (595)
+.+..... .+....|||||++||-... + ..|.++|+.+++......... ..+....|+|+++.|
T Consensus 7 ~~~~~h~~--~V~~~~fsp~~~~l~s~~~--------d--g~v~lWd~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l 70 (304)
T 2ynn_A 7 KTFSNRSD--RVKGIDFHPTEPWVLTTLY--------S--GRVELWNYETQVEVRSIQVTE----TPVRAGKFIARKNWI 70 (304)
T ss_dssp EEEEEECS--CEEEEEECSSSSEEEEEET--------T--SEEEEEETTTTEEEEEEECCS----SCEEEEEEEGGGTEE
T ss_pred EeecCCCC--ceEEEEECCCCCEEEEEcC--------C--CcEEEEECCCCceeEEeeccC----CcEEEEEEeCCCCEE
Confidence 44543333 4889999999998876542 2 456666988876433322221 146688999999988
Q ss_pred EEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC-eeecC-CCCeee
Q 007620 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVYT 178 (595)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~-~~~lt-~~~~~~ 178 (595)
+....+ ..|.++|+ +++ ...+. ....+.
T Consensus 71 ~s~s~d-------------------------------------------------~~i~vwd~~~~~~~~~~~~h~~~v~ 101 (304)
T 2ynn_A 71 IVGSDD-------------------------------------------------FRIRVFNYNTGEKVVDFEAHPDYIR 101 (304)
T ss_dssp EEEETT-------------------------------------------------SEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEECCC-------------------------------------------------CEEEEEECCCCcEEEEEeCCCCcEE
Confidence 775211 23445555 443 22332 234567
Q ss_pred eeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCc-eEEE-eccCCCCccCCccccccccCCCCceeecCCCee
Q 007620 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (595)
Q Consensus 179 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~ 256 (595)
.++|+|++++|+..+.+ ..+.+||+.++ .... +.... .....+.|+|++...
T Consensus 102 ~~~~~~~~~~l~sgs~D-------------~~v~lWd~~~~~~~~~~~~~h~-------------~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 102 SIAVHPTKPYVLSGSDD-------------LTVKLWNWENNWALEQTFEGHE-------------HFVMCVAFNPKDPST 155 (304)
T ss_dssp EEEECSSSSEEEEEETT-------------SCEEEEEGGGTTEEEEEECCCC-------------SCEEEEEECTTCTTE
T ss_pred EEEEcCCCCEEEEECCC-------------CeEEEEECCCCcchhhhhcccC-------------CcEEEEEECCCCCCE
Confidence 89999999988766542 36888998754 3322 22111 112357888843322
Q ss_pred EEEEEeecCCCcccccCCcceEEeccCCCCCCCCc-eeccc-cCccccceeecC--CCcEEEEEEeecccceEEEEEeCC
Q 007620 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHK-LDLRFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPG 332 (595)
Q Consensus 257 l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~-~~~~~~~~~wsp--Dg~~l~~~~~~~~~~~~L~~~d~~ 332 (595)
++.. .....+.+||+ ..+.. ..+.. .........|+| ++..++... .++ .|.++|+.
T Consensus 156 l~sg------------s~D~~v~iwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s--~D~--~i~iWd~~ 216 (304)
T 2ynn_A 156 FASG------------CLDRTVKVWSL---GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS--DDL--TIKIWDYQ 216 (304)
T ss_dssp EEEE------------ETTSEEEEEET---TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE--TTS--EEEEEETT
T ss_pred EEEE------------eCCCeEEEEEC---CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc--CCC--eEEEEeCC
Confidence 3322 12235667775 22222 22222 223345566765 666666653 223 56667887
Q ss_pred CCCCCcEEEeec--ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 333 SKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 333 ~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
+++ ....+..+ .+.. +.|+|+++.|+...
T Consensus 217 ~~~-~~~~~~~h~~~v~~---------~~~~p~~~~l~s~s 247 (304)
T 2ynn_A 217 TKS-CVATLEGHMSNVSF---------AVFHPTLPIIISGS 247 (304)
T ss_dssp TTE-EEEEEECCSSCEEE---------EEECSSSSEEEEEE
T ss_pred CCc-cceeeCCCCCCEEE---------EEECCCCCEEEEEc
Confidence 631 11222221 2222 68899998766544
No 99
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.78 E-value=1.5e-05 Score=80.31 Aligned_cols=227 Identities=11% Similarity=0.083 Sum_probs=123.2
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....|||||++||-.+. + ..|.++|..+++......... ..+..+.|+|+|+.|+....+
T Consensus 66 ~V~~~~~s~d~~~l~s~s~--------D--g~v~vWd~~~~~~~~~~~~~~----~~v~~~~~sp~g~~lasg~~d---- 127 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQ--------D--GKVIVWDSFTTNKEHAVTMPC----TWVMACAYAPSGCAIACGGLD---- 127 (354)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SEEEEEETTTCCEEEEEECSS----SCCCEEEECTTSSEEEEESTT----
T ss_pred eEEEEEECCCCCEEEEEeC--------C--CeEEEEECCCCCcceEEecCC----CCEEEEEECCCCCEEEEeeCC----
Confidence 5889999999998766542 2 456666887776433322222 146689999999988775211
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC---C---Ceeec-CCCCeeeeeEECC
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD---G---TAKDF-GTPAVYTAVEPSP 184 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~---g---~~~~l-t~~~~~~~~~~Sp 184 (595)
+ .-.+|.+... + ....+ .....+..+.|+|
T Consensus 128 ------------------~-------------------------~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 164 (354)
T 2pbi_B 128 ------------------N-------------------------KCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTN 164 (354)
T ss_dssp ------------------S-------------------------EEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECS
T ss_pred ------------------C-------------------------CEEEEEEeccccccccccceeeeccCCcEEEEEEeC
Confidence 1 0011111110 0 01111 1223456789999
Q ss_pred CCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeecC--CCeeEEEEE
Q 007620 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRAD--KPSTLYWVE 261 (595)
Q Consensus 185 Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd--g~~~l~~~~ 261 (595)
+++.|+..+.+ ..+.+||+.+++. ..+.... .....+.|+|+ |. .++..
T Consensus 165 ~~~~l~t~s~D-------------~~v~lwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~g~-~l~sg- 216 (354)
T 2pbi_B 165 SDMQILTASGD-------------GTCALWDVESGQLLQSFHGHG-------------ADVLCLDLAPSETGN-TFVSG- 216 (354)
T ss_dssp SSSEEEEEETT-------------SEEEEEETTTCCEEEEEECCS-------------SCEEEEEECCCSSCC-EEEEE-
T ss_pred CCCEEEEEeCC-------------CcEEEEeCCCCeEEEEEcCCC-------------CCeEEEEEEeCCCCC-EEEEE-
Confidence 99998877542 3688999886543 3333211 11223455553 43 23221
Q ss_pred eecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEE
Q 007620 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (595)
Q Consensus 262 ~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~ 340 (595)
.....+.+||. ..++.. .+......+..+.|+|++..|+... .++ .+.++|+.+. ....
T Consensus 217 -----------s~Dg~v~~wd~---~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s--~D~--~v~lwd~~~~--~~~~ 276 (354)
T 2pbi_B 217 -----------GCDKKAMVWDM---RSGQCVQAFETHESDVNSVRYYPSGDAFASGS--DDA--TCRLYDLRAD--REVA 276 (354)
T ss_dssp -----------ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTS--CEEEEETTTT--EEEE
T ss_pred -----------eCCCeEEEEEC---CCCcEEEEecCCCCCeEEEEEeCCCCEEEEEe--CCC--eEEEEECCCC--cEEE
Confidence 11235677776 323333 2333445677899999998877654 234 4556677662 2222
Q ss_pred EeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 341 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 341 l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
++...... .+...+.|+++|+.++...
T Consensus 277 ~~~~~~~~----~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 277 IYSKESII----FGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp EECCTTCC----SCEEEEEECTTSSEEEEEE
T ss_pred EEcCCCcc----cceeEEEEeCCCCEEEEEE
Confidence 22211000 0011278999999877654
No 100
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.77 E-value=4.5e-06 Score=86.00 Aligned_cols=243 Identities=16% Similarity=0.163 Sum_probs=138.3
Q ss_pred eeEEEecCCCCCCCC-ceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 6 GIGIHRLLPDDSLGP-EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~-~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.|.|+|+. +++ .+.+..+. ..+....|+|||+.||-.+. + ..|.++|+.+++..+......
T Consensus 131 ~i~vwd~~----~~~~~~~l~~h~--~~V~~v~~~~~~~~l~sgs~--------D--~~i~iwd~~~~~~~~~~~~h~-- 192 (410)
T 1vyh_C 131 TIKVWDYE----TGDFERTLKGHT--DSVQDISFDHSGKLLASCSA--------D--MTIKLWDFQGFECIRTMHGHD-- 192 (410)
T ss_dssp CEEEEETT----TCCCCEEECCCS--SCEEEEEECTTSSEEEEEET--------T--SCCCEEETTSSCEEECCCCCS--
T ss_pred eEEEEECC----CCcEEEEEeccC--CcEEEEEEcCCCCEEEEEeC--------C--CeEEEEeCCCCceeEEEcCCC--
Confidence 47788887 444 44454322 35888999999997765542 2 345555888777544322211
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
..+..+.|+|+|+.|+....+ ..|.++|+
T Consensus 193 --~~V~~v~~~p~~~~l~s~s~D-------------------------------------------------~~i~~wd~ 221 (410)
T 1vyh_C 193 --HNVSSVSIMPNGDHIVSASRD-------------------------------------------------KTIKMWEV 221 (410)
T ss_dssp --SCEEEEEECSSSSEEEEEETT-------------------------------------------------SEEEEEET
T ss_pred --CCEEEEEEeCCCCEEEEEeCC-------------------------------------------------CeEEEEEC
Confidence 156789999999987764211 23444555
Q ss_pred -CCC-eeecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCcccccc
Q 007620 165 -DGT-AKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSV 240 (595)
Q Consensus 165 -~g~-~~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~ 240 (595)
++. .+.+. ....+..+.++|||+.|+....+ ..+.+||+.+++. ..+....
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D-------------~~v~vwd~~~~~~~~~~~~h~------------ 276 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND-------------QTVRVWVVATKECKAELREHR------------ 276 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCCEEEEECCCS------------
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC-------------CeEEEEECCCCceeeEecCCC------------
Confidence 443 22332 22345678999999988877642 3688899876543 3332211
Q ss_pred ccCCCCceeecCCCe------------------eEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc-eeccccCccc
Q 007620 241 REGMRSISWRADKPS------------------TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRF 301 (595)
Q Consensus 241 ~~~~~~~~wspdg~~------------------~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~~~~~~ 301 (595)
.....+.|+|++.. .+... . .....+.+||+ ..+.. ..+......+
T Consensus 277 -~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s-g----------s~D~~i~iwd~---~~~~~~~~~~~h~~~v 341 (410)
T 1vyh_C 277 -HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS-G----------SRDKTIKMWDV---STGMCLMTLVGHDNWV 341 (410)
T ss_dssp -SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE-E----------ETTSEEEEEET---TTTEEEEEEECCSSCE
T ss_pred -ceEEEEEEcCcccccchhhhccccccccCCCCCEEEE-E----------eCCCeEEEEEC---CCCceEEEEECCCCcE
Confidence 01224556665320 01111 1 12235777786 32232 2333344556
Q ss_pred cceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 302 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 302 ~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
..+.|+|+|..|+... .++ .|.++|+.+++ ....+.. ..+.. +.|++++..|+...
T Consensus 342 ~~v~~~~~g~~l~s~s--~D~--~i~vwd~~~~~-~~~~~~~h~~~v~~---------l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 342 RGVLFHSGGKFILSCA--DDK--TLRVWDYKNKR-CMKTLNAHEHFVTS---------LDFHKTAPYVVTGS 399 (410)
T ss_dssp EEEEECSSSSCEEEEE--TTT--EEEEECCTTSC-CCEEEECCSSCEEE---------EEECSSSSCEEEEE
T ss_pred EEEEEcCCCCEEEEEe--CCC--eEEEEECCCCc-eEEEEcCCCCcEEE---------EEEcCCCCEEEEEe
Confidence 7889999999877654 234 56667877642 2333322 22333 78999998766543
No 101
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.77 E-value=7.7e-06 Score=83.28 Aligned_cols=240 Identities=13% Similarity=0.094 Sum_probs=122.9
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....|||||++||-.+. ...|.++|+.+++......... ..+..+.|+|||+.|+....+
T Consensus 68 ~V~~~~~sp~~~~l~s~s~----------D~~v~iWd~~~~~~~~~~~~h~----~~v~~~~~s~~g~~las~~~d---- 129 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQ----------DGRLIVWNALTSQKTHAIKLHC----PWVMECAFAPNGQSVACGGLD---- 129 (380)
T ss_dssp CEEEEEECTTSSCEEEEET----------TSEEEEEETTTTEEEEEEECCC----TTCCCCEECTTSSEEEECCSS----
T ss_pred EEEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCccceEEecCC----CCEEEEEECCCCCEEEEeeCC----
Confidence 5889999999998766542 2456667988876544332221 146689999999988764211
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC----CCC---eeecC-CCCeeeeeEEC
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL----DGT---AKDFG-TPAVYTAVEPS 183 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~----~g~---~~~lt-~~~~~~~~~~S 183 (595)
+ .-.||-+.. .+. .+.+. .......+.|+
T Consensus 130 ------------------~-------------------------~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~ 166 (380)
T 3iz6_a 130 ------------------S-------------------------ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYV 166 (380)
T ss_dssp ------------------S-------------------------CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCC
T ss_pred ------------------C-------------------------cEEEEECCCCccccCCccceeeccCCCcceEEEEEe
Confidence 0 011111110 010 11121 12234567899
Q ss_pred CCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeec-CCCeeEEEEEe
Q 007620 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEA 262 (595)
Q Consensus 184 pDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp-dg~~~l~~~~~ 262 (595)
|++...+++... ...+.+||+.++........... .+.......+.|++ ++. .++..
T Consensus 167 ~~~~~~l~s~s~------------D~~i~~wd~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~-~l~sg-- 224 (380)
T 3iz6_a 167 PDQETRLITGSG------------DQTCVLWDVTTGQRISIFGSEFP-------SGHTADVLSLSINSLNAN-MFISG-- 224 (380)
T ss_dssp SSSSSCEEEECT------------TSCEEEECTTTCCEEEEECCCSS-------SSCCSCEEEEEECSSSCC-EEEEE--
T ss_pred cCCCCEEEEECC------------CCcEEEEEcCCCcEEEEeecccC-------CCCccCeEEEEeecCCCC-EEEEE--
Confidence 986554444432 23688999886654332211100 00001122355654 443 22221
Q ss_pred ecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEe
Q 007620 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (595)
Q Consensus 263 ~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~ 342 (595)
.....+.+||+ ...+...+.+......+..+.|+||+..|+... .++ .|.++|+.++ .....+
T Consensus 225 ----------s~D~~v~~wd~-~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s--~D~--~i~lwd~~~~--~~~~~~ 287 (380)
T 3iz6_a 225 ----------SCDTTVRLWDL-RITSRAVRTYHGHEGDINSVKFFPDGQRFGTGS--DDG--TCRLFDMRTG--HQLQVY 287 (380)
T ss_dssp ----------ETTSCEEEEET-TTTCCCCEEECCCSSCCCEEEECTTSSEEEEEC--SSS--CEEEEETTTT--EEEEEE
T ss_pred ----------ECCCeEEEEEC-CCCCcceEEECCcCCCeEEEEEecCCCeEEEEc--CCC--eEEEEECCCC--cEEEEe
Confidence 11235666775 111112233444556688899999999887654 234 4666687763 222222
Q ss_pred ecccc-cccCCCCCCCeeeCCCCCEEEEEe
Q 007620 343 DRVFE-NVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 343 ~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
..... .....+....+.|+++|+.++...
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEEC
T ss_pred cccccccccccCceEEEEECCCCCEEEEEE
Confidence 21110 000001112378999999877654
No 102
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.77 E-value=2e-06 Score=89.45 Aligned_cols=304 Identities=10% Similarity=0.081 Sum_probs=148.6
Q ss_pred cccceEEccC-CCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEec-CCcEEEEEecCCC
Q 007620 32 KINFVSWSPD-GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSR 109 (595)
Q Consensus 32 ~~~~~~~SPD-G~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wsp-dg~~l~~~~~~~~ 109 (595)
.+...+|+|+ ++.||.-+ . + ..|.++|+.+++...+..... ....+..+.|+| |++.|+-...+
T Consensus 121 ~V~~l~~~P~~~~~lasGs-~-------d--g~i~lWd~~~~~~~~~~~~~g--H~~~V~~l~f~p~~~~~l~s~s~D-- 186 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGS-K-------G--GDIMLWNFGIKDKPTFIKGIG--AGGSITGLKFNPLNTNQFYASSME-- 186 (435)
T ss_dssp CEEEEEECSSCTTCEEEEE-T-------T--SCEEEECSSCCSCCEEECCCS--SSCCCCEEEECSSCTTEEEEECSS--
T ss_pred CEEEEEEeCCCCCEEEEEe-C-------C--CEEEEEECCCCCceeEEEccC--CCCCEEEEEEeCCCCCEEEEEeCC--
Confidence 4788999995 55555433 2 2 456666887766433322111 112577999998 67766554211
Q ss_pred CCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCC-CeeecCCC----CeeeeeEECC
Q 007620 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP----AVYTAVEPSP 184 (595)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~lt~~----~~~~~~~~Sp 184 (595)
..|.++|+.+ ..+.+... .....++|+|
T Consensus 187 -----------------------------------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (435)
T 4e54_B 187 -----------------------------------------------GTTRLQDFKGNILRVFASSDTINIWFCSLDVSA 219 (435)
T ss_dssp -----------------------------------------------SCEEEEETTSCEEEEEECCSSCSCCCCCEEEET
T ss_pred -----------------------------------------------CEEEEeeccCCceeEEeccCCCCccEEEEEECC
Confidence 1233445533 22222111 1234789999
Q ss_pred CCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeec
Q 007620 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (595)
Q Consensus 185 Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d 264 (595)
||+.|+.... ...|.+||+.++....+... ......+.|+|++...++.. .
T Consensus 220 ~~~~l~~g~~-------------dg~i~~wd~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~~~s~-s-- 270 (435)
T 4e54_B 220 SSRMVVTGDN-------------VGNVILLNMDGKELWNLRMH-------------KKKVTHVALNPCCDWFLATA-S-- 270 (435)
T ss_dssp TTTEEEEECS-------------SSBEEEEESSSCBCCCSBCC-------------SSCEEEEEECTTCSSEEEEE-E--
T ss_pred CCCEEEEEeC-------------CCcEeeeccCcceeEEEecc-------------cceEEeeeecCCCceEEEEe-c--
Confidence 9998877643 23688999887654433211 11234578999987533222 1
Q ss_pred CCCcccccCCcceEEeccCCCCCCCCceecc---ccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEE
Q 007620 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILH---KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (595)
Q Consensus 265 ~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~---~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l 341 (595)
....+.+||+ ..+.....+. .....+..+.|+|||..|+... .++ .|.++|+.+++ .+..+
T Consensus 271 ---------~d~~v~iwd~--~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~--~D~--~i~iwd~~~~~-~~~~~ 334 (435)
T 4e54_B 271 ---------VDQTVKIWDL--RQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD--QKS--EIRVYSASQWD-CPLGL 334 (435)
T ss_dssp ---------TTSBCCEEET--TTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE--SSS--CEEEEESSSSS-SEEEE
T ss_pred ---------CcceeeEEec--ccccccceEEEeeeccccccceeECCCCCeeEEEc--CCC--EEEEEECCCCc-cceEE
Confidence 1123445554 1111111221 2234567789999999877654 223 46666777642 22333
Q ss_pred eecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecCcccccee
Q 007620 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 421 (595)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 421 (595)
..+... ...........|++++..+++..... +..+...+ .....+..+|..+|+.......... ..
T Consensus 335 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~------~~~~~i~iwd~~~g~~~~~l~~~~~---~~ 401 (435)
T 4e54_B 335 IPHPHR-HFQHLTPIKAAWHPRYNLIVVGRYPD---PNFKSCTP------YELRTIDVFDGNSGKMMCQLYDPES---SG 401 (435)
T ss_dssp CCCCCC-CCSSSCCCBCEECSSSSCEEEECCCC---TTSCCSST------TCCCCEEEECSSSCCEEEEECCSSC---CC
T ss_pred eccccc-ccccceeEEEEEcCCCCEEEEEEcCC---CCeEEEEe------cCCCEEEEEECCCCcEEEEEeCCCC---Cc
Confidence 221110 00000011256788887766554321 11111110 0111233456666664433221110 11
Q ss_pred eEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCcee
Q 007620 422 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (595)
Q Consensus 422 ~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~ 465 (595)
+..+ ..|++++..|+ +.+ . ..+.+-++..++.+
T Consensus 402 v~s~------~~fspdg~~la-sg~-d---~~i~iW~~~~gk~r 434 (435)
T 4e54_B 402 ISSL------NEFNPMGDTLA-SAM-G---YHILIWSQQEARTR 434 (435)
T ss_dssp CCCE------EEECTTSSCEE-EEC-S---SEEEECCCC-----
T ss_pred EEEE------EEECCCCCEEE-EEc-C---CcEEEEECCcCeee
Confidence 1111 24788887654 332 2 24778787766554
No 103
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.76 E-value=3.3e-06 Score=95.10 Aligned_cols=236 Identities=11% Similarity=0.091 Sum_probs=138.9
Q ss_pred eeEEEecCCCCCCCC-ceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEe-cccCCCc
Q 007620 6 GIGIHRLLPDDSLGP-EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDI 83 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~-~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~-lt~~~~~ 83 (595)
.|.|+|+. +|+ .+.++. ....+..+.|||||++||.... ...|.++++.+++... +.....
T Consensus 36 ~v~iwd~~----~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~----------dg~i~vw~~~~~~~~~~~~~~~~- 98 (814)
T 3mkq_A 36 RVEIWNYE----TQVEVRSIQV--TETPVRAGKFIARKNWIIVGSD----------DFRIRVFNYNTGEKVVDFEAHPD- 98 (814)
T ss_dssp EEEEEETT----TTEEEEEEEC--CSSCEEEEEEEGGGTEEEEEET----------TSEEEEEETTTCCEEEEEECCSS-
T ss_pred EEEEEECC----CCceEEEEec--CCCcEEEEEEeCCCCEEEEEeC----------CCeEEEEECCCCcEEEEEecCCC-
Confidence 57888887 453 445553 2335889999999999988753 3568888998887544 332222
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEc
Q 007620 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 163 (595)
.+..+.|+||++.|+....+ ..|.+++
T Consensus 99 ----~v~~~~~s~~~~~l~~~~~d-------------------------------------------------g~i~vw~ 125 (814)
T 3mkq_A 99 ----YIRSIAVHPTKPYVLSGSDD-------------------------------------------------LTVKLWN 125 (814)
T ss_dssp ----CEEEEEECSSSSEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred ----CEEEEEEeCCCCEEEEEcCC-------------------------------------------------CEEEEEE
Confidence 56789999999988765211 1233444
Q ss_pred C-CC-Ce-eecC-CCCeeeeeEECC-CCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccc
Q 007620 164 L-DG-TA-KDFG-TPAVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCY 237 (595)
Q Consensus 164 ~-~g-~~-~~lt-~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~ 237 (595)
+ ++ .. ..+. .......++|+| |++.|+..... ..+.+||+.++.. ..+....
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-------------g~v~vwd~~~~~~~~~~~~~~--------- 183 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-------------RTVKVWSLGQSTPNFTLTTGQ--------- 183 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT-------------SEEEEEETTCSSCSEEEECCC---------
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC-------------CeEEEEECCCCcceeEEecCC---------
Confidence 4 22 22 2222 233456889999 77777776532 3688999875433 2222110
Q ss_pred cccccCCCCceeec--CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEE
Q 007620 238 NSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALV 314 (595)
Q Consensus 238 ~~~~~~~~~~~wsp--dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~ 314 (595)
......+.|+| ++.. |+.. .....+.+++. ..++.. .+......+..+.|+|++..++
T Consensus 184 ---~~~v~~~~~~~~~~~~~-l~~~------------~~dg~i~~~d~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 244 (814)
T 3mkq_A 184 ---ERGVNYVDYYPLPDKPY-MITA------------SDDLTIKIWDY---QTKSCVATLEGHMSNVSFAVFHPTLPIII 244 (814)
T ss_dssp ---TTCCCEEEECCSTTCCE-EEEE------------CTTSEEEEEET---TTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred ---CCCEEEEEEEECCCCCE-EEEE------------eCCCEEEEEEC---CCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 01134578888 7662 3222 12235677775 322322 2333445677899999998776
Q ss_pred EEEeecccceEEEEEeCCCCCCCcEEEee---cccccccCCCCCCCeeeCCCCCEE
Q 007620 315 NETWYKTSQTRTWLVCPGSKDVAPRVLFD---RVFENVYSDPGSPMMTRTSTGTNV 367 (595)
Q Consensus 315 ~~~~~~~~~~~L~~~d~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~dg~~l 367 (595)
... .++ .|.++|+.++ .....+. ..+.. +.|+|+|+.+
T Consensus 245 ~~~--~dg--~v~vwd~~~~--~~~~~~~~~~~~v~~---------~~~~~~~~~~ 285 (814)
T 3mkq_A 245 SGS--EDG--TLKIWNSSTY--KVEKTLNVGLERSWC---------IATHPTGRKN 285 (814)
T ss_dssp EEE--TTS--CEEEEETTTC--SEEEEECCSSSSEEE---------EEECTTCGGG
T ss_pred EEe--CCC--eEEEEECCCC--cEEEEeecCCCcEEE---------EEEccCCCce
Confidence 653 223 5667788763 2222221 12222 7889998754
No 104
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.76 E-value=9.6e-07 Score=89.08 Aligned_cols=222 Identities=14% Similarity=0.064 Sum_probs=125.4
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc---eEecccCCCccccccccceEEecCCcEEEEEecCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~---~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~ 108 (595)
.+...+|||||+.||.... ...|.++++.+++ ...+..... .+..+.|+|+++.|+....+
T Consensus 10 ~i~~~~~s~~~~~l~~~~~----------d~~v~i~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~~~~d- 73 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPN----------NHEVHIYEKSGNKWVQVHELKEHNG-----QVTGVDWAPDSNRIVTCGTD- 73 (372)
T ss_dssp CCCEEEECTTSSEEEEECS----------SSEEEEEEEETTEEEEEEEEECCSS-----CEEEEEEETTTTEEEEEETT-
T ss_pred CeEEEEECCCCCEEEEEeC----------CCEEEEEeCCCCcEEeeeeecCCCC-----cccEEEEeCCCCEEEEEcCC-
Confidence 5889999999998887642 3567777888775 333332222 56789999999988775211
Q ss_pred CCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCee---ecC-CCCeeeeeEEC
Q 007620 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK---DFG-TPAVYTAVEPS 183 (595)
Q Consensus 109 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~---~lt-~~~~~~~~~~S 183 (595)
..|.++++ +++.. .+. .......++|+
T Consensus 74 ------------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 105 (372)
T 1k8k_C 74 ------------------------------------------------RNAYVWTLKGRTWKPTLVILRINRAARCVRWA 105 (372)
T ss_dssp ------------------------------------------------SCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred ------------------------------------------------CeEEEEECCCCeeeeeEEeecCCCceeEEEEC
Confidence 12333444 33211 111 22345689999
Q ss_pred CCCCeEEEEEcccCccccccCcccceeEEEEcCCCce----EEEeccCCCCccCCccccccccCCCCceeecCCCeeEEE
Q 007620 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (595)
Q Consensus 184 pDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~ 259 (595)
|||++|+..... ..+.+||+..+. ...+... .......+.|+|+++. ++.
T Consensus 106 ~~~~~l~~~~~d-------------~~v~i~d~~~~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~~-l~~ 159 (372)
T 1k8k_C 106 PNEKKFAVGSGS-------------RVISICYFEQENDWWVCKHIKKP------------IRSTVLSLDWHPNSVL-LAA 159 (372)
T ss_dssp TTSSEEEEEETT-------------SSEEEEEEETTTTEEEEEEECTT------------CCSCEEEEEECTTSSE-EEE
T ss_pred CCCCEEEEEeCC-------------CEEEEEEecCCCcceeeeeeecc------------cCCCeeEEEEcCCCCE-EEE
Confidence 999998887642 257777766443 1222110 0011346889999873 322
Q ss_pred EEeecCCCcccccCCcceEEeccCCC---------------CCCCCc-eeccccCccccceeecCCCcEEEEEEeecccc
Q 007620 260 VEAQDRGDANVEVSPRDIIYTQPAEP---------------AEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (595)
Q Consensus 260 ~~~~d~~~~~~~~~~~~~~~~~d~~~---------------~~g~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (595)
. . ....+.++++.. ...++. ..+......+..+.|+|++..|+... .++
T Consensus 160 ~-~-----------~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~- 224 (372)
T 1k8k_C 160 G-S-----------CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS--HDS- 224 (372)
T ss_dssp E-E-----------TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE--TTT-
T ss_pred E-c-----------CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe--CCC-
Confidence 2 1 122455555300 001122 22323344577899999998777654 223
Q ss_pred eEEEEEeCCCCCCCcEEEeec---ccccccCCCCCCCeeeCCCCCEEEEE
Q 007620 324 TRTWLVCPGSKDVAPRVLFDR---VFENVYSDPGSPMMTRTSTGTNVIAK 370 (595)
Q Consensus 324 ~~L~~~d~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~dg~~l~~~ 370 (595)
.|.++|+.++ +....+.. .+.. +.|+++|+.++..
T Consensus 225 -~i~i~d~~~~--~~~~~~~~~~~~v~~---------~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 225 -TVCLADADKK--MAVATLASETLPLLA---------VTFITESSLVAAG 262 (372)
T ss_dssp -EEEEEEGGGT--TEEEEEECSSCCEEE---------EEEEETTEEEEEE
T ss_pred -EEEEEECCCC--ceeEEEccCCCCeEE---------EEEecCCCEEEEE
Confidence 5777788763 32222221 2222 7889998866544
No 105
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.76 E-value=9.2e-07 Score=90.25 Aligned_cols=121 Identities=13% Similarity=0.008 Sum_probs=67.5
Q ss_pred eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeecCCC
Q 007620 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (595)
Q Consensus 176 ~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (595)
....++|+|+| .|+.... ...+.+||+.+++. ..+........ .......+.|+|+++
T Consensus 188 ~i~~~~~~~~~-~l~~~~~-------------dg~i~i~d~~~~~~~~~~~~~~~h~~-------~~~~i~~i~~~~~~~ 246 (397)
T 1sq9_A 188 FATSVDISERG-LIATGFN-------------NGTVQISELSTLRPLYNFESQHSMIN-------NSNSIRSVKFSPQGS 246 (397)
T ss_dssp CCCEEEECTTS-EEEEECT-------------TSEEEEEETTTTEEEEEEECCC---C-------CCCCEEEEEECSSTT
T ss_pred CceEEEECCCc-eEEEEeC-------------CCcEEEEECCCCceeEEEeccccccc-------cCCccceEEECCCCC
Confidence 35678999999 6555532 23789999886544 33332000000 001134688999987
Q ss_pred eeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-eccc-------------cCccccceeecCCCcEEEEEEeec
Q 007620 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHK-------------LDLRFRSVSWCDDSLALVNETWYK 320 (595)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~-------------~~~~~~~~~wspDg~~l~~~~~~~ 320 (595)
. |+.. ..++ ....+.++|+ ..++.. .+.. ....+..+.|+||+..|+... .
T Consensus 247 ~-l~~~-~~d~--------~~g~i~i~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~ 311 (397)
T 1sq9_A 247 L-LAIA-HDSN--------SFGCITLYET---EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG--W 311 (397)
T ss_dssp E-EEEE-EEET--------TEEEEEEEET---TTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE--T
T ss_pred E-EEEE-ecCC--------CCceEEEEEC---CCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe--C
Confidence 3 3322 1110 0035777775 323332 2333 345577899999999877654 2
Q ss_pred ccceEEEEEeCCCC
Q 007620 321 TSQTRTWLVCPGSK 334 (595)
Q Consensus 321 ~~~~~L~~~d~~~~ 334 (595)
++ .|.++|+.++
T Consensus 312 dg--~i~iwd~~~~ 323 (397)
T 1sq9_A 312 DG--KLRFWDVKTK 323 (397)
T ss_dssp TS--EEEEEETTTT
T ss_pred CC--eEEEEEcCCC
Confidence 23 6777888773
No 106
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.75 E-value=1e-05 Score=81.01 Aligned_cols=230 Identities=10% Similarity=0.068 Sum_probs=122.8
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEe-cccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~-lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~ 110 (595)
.+....|||||+.|+-.+. ...|.++|+.+++... +..... .+..+.|+||++.|+....+
T Consensus 78 ~V~~~~~~~~~~~l~s~s~----------D~~v~lwd~~~~~~~~~~~~h~~-----~v~~v~~sp~~~~l~s~~~d--- 139 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSW----------DKTLRLWDLRTGTTYKRFVGHQS-----EVYSVAFSPDNRQILSAGAE--- 139 (343)
T ss_dssp CEEEEEECSSTTEEEEEET----------TSEEEEEETTSSCEEEEEECCCS-----CEEEEEECSSTTEEEEEETT---
T ss_pred ceEEEEECCCCCEEEEEcC----------CCcEEEEECCCCcEEEEEcCCCC-----cEEEEEECCCCCEEEEEcCC---
Confidence 5788999999998764432 2456677998887543 332222 56789999999988765211
Q ss_pred CCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCC-eeecC----CCCeeeeeEECCC
Q 007620 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFG----TPAVYTAVEPSPD 185 (595)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~lt----~~~~~~~~~~SpD 185 (595)
..|.++|+.+. ...+. .......+.|+|+
T Consensus 140 ----------------------------------------------~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 140 ----------------------------------------------REIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp ----------------------------------------------SCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred ----------------------------------------------CEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 12233333221 11111 1223557788888
Q ss_pred C----------CeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCe
Q 007620 186 Q----------KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (595)
Q Consensus 186 g----------~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~ 255 (595)
+ .+|+.... ...+.+||..+.....+.... .....+.|+|||+.
T Consensus 174 ~~~~~~~~~~~~~l~s~~~-------------d~~i~iwd~~~~~~~~~~~h~-------------~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGW-------------DGRLKVWNTNFQIRYTFKAHE-------------SNVNHLSISPNGKY 227 (343)
T ss_dssp CCSCSCCCSSCCEEEEEET-------------TSEEEEEETTTEEEEEEECCS-------------SCEEEEEECTTSSE
T ss_pred cccccccCCCCCEEEEEcC-------------CCEEEEEcCCCceeEEEcCcc-------------ccceEEEECCCCCE
Confidence 7 45554432 236888996655444443221 11345889999983
Q ss_pred eEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCC
Q 007620 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (595)
Q Consensus 256 ~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~ 335 (595)
|+.. .....+.+||+ ...+...........+..+.|+|++..++... ++ .+.++++.+..
T Consensus 228 -l~sg------------s~dg~v~iwd~--~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~---d~--~v~iw~~~~~~ 287 (343)
T 2xzm_R 228 -IATG------------GKDKKLLIWDI--LNLTYPQREFDAGSTINQIAFNPKLQWVAVGT---DQ--GVKIFNLMTQS 287 (343)
T ss_dssp -EEEE------------ETTCEEEEEES--SCCSSCSEEEECSSCEEEEEECSSSCEEEEEE---SS--CEEEEESSSCC
T ss_pred -EEEE------------cCCCeEEEEEC--CCCcccceeecCCCcEEEEEECCCCCEEEEEC---CC--CEEEEEeCCCC
Confidence 3222 12245677775 12222222222334577899999998765432 22 35566766632
Q ss_pred CCcEEEee-ccccccc---C-CCCCCCeeeCCCCCEEEEEe
Q 007620 336 VAPRVLFD-RVFENVY---S-DPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 336 ~~~~~l~~-~~~~~~~---~-~~~~~~~~~~~dg~~l~~~~ 371 (595)
......+. ....... . .+....+.|+|+|+.|+...
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 288 KAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp SCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred CCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 11111111 0000000 0 00011278999999876654
No 107
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.74 E-value=1.6e-06 Score=88.23 Aligned_cols=254 Identities=13% Similarity=0.090 Sum_probs=133.5
Q ss_pred eeEEEecCCCCCCCCceeeecC-CCCCcccceEEcc-CCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGY-PDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~-~~~~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~ 83 (595)
.|.|+|+. +++......+ .....+....|+| |++.|+... . ...|.++++.++....+.....
T Consensus 97 ~i~iwd~~----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~---------d~~i~iwd~~~~~~~~~~~~~~- 161 (383)
T 3ei3_B 97 DIILWDYD----VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS-I---------RGATTLRDFSGSVIQVFAKTDS- 161 (383)
T ss_dssp CEEEEETT----STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE-T---------TTEEEEEETTSCEEEEEECCCC-
T ss_pred eEEEEeCC----CcccceeeecCCcCCceeEEEeCCCCCCEEEEEe-C---------CCEEEEEECCCCceEEEeccCC-
Confidence 57888887 5555444322 2334688999999 566655543 2 2567777988766555543321
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEc
Q 007620 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 163 (595)
....+..+.|+|+++.|+.... ...|.++|
T Consensus 162 -~~~~v~~~~~~~~~~~l~~~~~-------------------------------------------------d~~i~i~d 191 (383)
T 3ei3_B 162 -WDYWYCCVDVSVSRQMLATGDS-------------------------------------------------TGRLLLLG 191 (383)
T ss_dssp -SSCCEEEEEEETTTTEEEEEET-------------------------------------------------TSEEEEEE
T ss_pred -CCCCeEEEEECCCCCEEEEECC-------------------------------------------------CCCEEEEE
Confidence 1124678999999998776521 12455566
Q ss_pred CCCC-eeecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC----ceEEEeccCCCCccCCccc
Q 007620 164 LDGT-AKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG----KLVRELCDLPPAEDIPVCY 237 (595)
Q Consensus 164 ~~g~-~~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g----~~~~~l~~~~~~~~~~~~~ 237 (595)
++++ ...+. ....+..++|+|++++++++.... ..+.+||+.. +.........
T Consensus 192 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~--------- 250 (383)
T 3ei3_B 192 LDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD------------ATVKLWDLRNIKDKNSYIAEMPHE--------- 250 (383)
T ss_dssp TTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT------------SEEEEEEGGGCCSTTCEEEEEECS---------
T ss_pred CCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC------------CEEEEEeCCCCCcccceEEEecCC---------
Confidence 6543 33332 234567899999999544444322 3688898764 2222211110
Q ss_pred cccccCCCCceeec-CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccC------ccccceeecCCC
Q 007620 238 NSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD------LRFRSVSWCDDS 310 (595)
Q Consensus 238 ~~~~~~~~~~~wsp-dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~------~~~~~~~wspDg 310 (595)
.....+.|+| ++.. |+.. .....+.++|+ .++.....+.... .......|+|++
T Consensus 251 ----~~v~~~~~s~~~~~~-l~~~------------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 311 (383)
T 3ei3_B 251 ----KPVNAAYFNPTDSTK-LLTT------------DQRNEIRVYSS--YDWSKPDQIIIHPHRQFQHLTPIKATWHPMY 311 (383)
T ss_dssp ----SCEEEEEECTTTSCE-EEEE------------ESSSEEEEEET--TBTTSCSEEEECCBCCCTTSCCCCCEECSSS
T ss_pred ----CceEEEEEcCCCCCE-EEEE------------cCCCcEEEEEC--CCCccccccccccccccccccceEEeccCCC
Confidence 1134688999 8873 3322 11245667775 2222222222111 111234677766
Q ss_pred cEEEEEEee-----cccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEE
Q 007620 311 LALVNETWY-----KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 370 (595)
Q Consensus 311 ~~l~~~~~~-----~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~ 370 (595)
..++..... ......|.++|+.+++ ....+......... ..+.|+++|+.|+..
T Consensus 312 ~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~-~~~~l~~~~~~~~~-----~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 312 DLIVAGRYPDDQLLLNDKRTIDIYDANSGG-LVHQLRDPNAAGII-----SLNKFSPTGDVLASG 370 (383)
T ss_dssp SEEEEECBCCTTTCTTCCCCEEEEETTTCC-EEEEECBTTBCSCC-----CEEEECTTSSEEEEE
T ss_pred CceEEEecCCcccccCCCCeEEEEecCCCc-eeeeecCCCCCceE-----EEEEEecCccEEEEe
Confidence 543322100 0012357777887731 22222211111111 125899999987655
No 108
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.74 E-value=1.4e-07 Score=95.90 Aligned_cols=224 Identities=12% Similarity=0.048 Sum_probs=118.2
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....|||||++||.... + ..|.++++.++....+..... ....+..+.|+||++.|+....+
T Consensus 13 ~v~~~~~s~~g~~l~~~~~--------d--~~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~d---- 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTA--------T--NQVELYEQDGNGWKHARTFSD--HDKIVTCVDWAPKSNRIVTCSQD---- 76 (377)
T ss_dssp CCSCCEECSSSSEEECCCS--------S--SCBCEEEEETTEEEECCCBCC--CSSCEEEEEECTTTCCEEEEETT----
T ss_pred cEEEEEECCCCCEEEEecC--------C--CEEEEEEccCCceEEEEEEec--CCceEEEEEEeCCCCEEEEEeCC----
Confidence 5889999999998876532 2 344555666663233322211 01256789999999988775321
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC----eeecC-CCCeeeeeEECCC
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT----AKDFG-TPAVYTAVEPSPD 185 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~----~~~lt-~~~~~~~~~~SpD 185 (595)
..|.++++ +++ ...+. ....+..++|+||
T Consensus 77 ---------------------------------------------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (377)
T 3dwl_C 77 ---------------------------------------------RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN 111 (377)
T ss_dssp ---------------------------------------------SSEEEC------CCCCEEECCCCSSCEEEEECCTT
T ss_pred ---------------------------------------------CeEEEEEcCCCCceeeeeEecccCCceEEEEECCC
Confidence 12333333 222 11222 2234568999999
Q ss_pred CCeEEEEEcccCccccccCcccceeEEEEcCCCce----EEEecc-CCCCccCCccccccccCCCCceeecCCCeeEEEE
Q 007620 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCD-LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (595)
Q Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~----~~~l~~-~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (595)
|+.|+..... ..+.+||+.++. .+.+.. .. .....+.|+|+++. |+..
T Consensus 112 ~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~-l~~~ 164 (377)
T 3dwl_C 112 EDKFAVGSGA-------------RVISVCYFEQENDWWVSKHLKRPLR-------------STILSLDWHPNNVL-LAAG 164 (377)
T ss_dssp SSCCEEEESS-------------SCEEECCC-----CCCCEEECSSCC-------------SCEEEEEECTTSSE-EEEE
T ss_pred CCEEEEEecC-------------CeEEEEEECCcccceeeeEeecccC-------------CCeEEEEEcCCCCE-EEEE
Confidence 9998877642 368889988664 333332 11 11346889999873 3322
Q ss_pred EeecCCCcccccCCcceEEeccCCCCCC-----------------CCceeccccCccccceeecCCCcEEEEEEeecccc
Q 007620 261 EAQDRGDANVEVSPRDIIYTQPAEPAEG-----------------EKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (595)
Q Consensus 261 ~~~d~~~~~~~~~~~~~~~~~d~~~~~g-----------------~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (595)
.. ...+.++++ ..+ ++..........+..+.|+|||..|+... .++
T Consensus 165 -~~-----------d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~d~- 227 (377)
T 3dwl_C 165 -CA-----------DRKAYVLSA--YVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG--HDS- 227 (377)
T ss_dssp -ES-----------SSCEEEEEE--CCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE--TTT-
T ss_pred -eC-----------CCEEEEEEE--EecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEe--CCC-
Confidence 11 123445553 000 01111112334467889999999877654 223
Q ss_pred eEEEEEeCCCCCCCc---EEEee--cccccccCCCCCCCeeeCCCCCEEEEE
Q 007620 324 TRTWLVCPGSKDVAP---RVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAK 370 (595)
Q Consensus 324 ~~L~~~d~~~~~~~~---~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~ 370 (595)
.|.++|+.+++..+ ..+.. ..+.. +.|+++|+.|+..
T Consensus 228 -~i~iwd~~~~~~~~~~~~~~~~~~~~v~~---------~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 228 -SVTIAYPSAPEQPPRALITVKLSQLPLRS---------LLWANESAIVAAG 269 (377)
T ss_dssp -EEC-CEECSTTSCEEECCCEECSSSCEEE---------EEEEETTEEEEEE
T ss_pred -cEEEEECCCCCCcceeeEeecCCCCceEE---------EEEcCCCCEEEEE
Confidence 56666766642111 11211 11222 7899999876554
No 109
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.74 E-value=9.2e-06 Score=83.65 Aligned_cols=220 Identities=12% Similarity=0.121 Sum_probs=124.2
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEe-cccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~-lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~ 110 (595)
.+....|+|||+.|+-.+. + ..|.++|+.+++... +..... .+..+.|+|+|+.|+....+
T Consensus 110 ~V~~~~~~p~~~~l~s~s~--------D--g~i~vwd~~~~~~~~~l~~h~~-----~V~~v~~~~~~~~l~sgs~D--- 171 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASE--------D--ATIKVWDYETGDFERTLKGHTD-----SVQDISFDHSGKLLASCSAD--- 171 (410)
T ss_dssp CEEEEEECSSSSEEEEEES--------S--SCEEEEETTTCCCCEEECCCSS-----CEEEEEECTTSSEEEEEETT---
T ss_pred cEEEEEEcCCCCEEEEEeC--------C--CeEEEEECCCCcEEEEEeccCC-----cEEEEEEcCCCCEEEEEeCC---
Confidence 4778899999997766542 2 456667988887543 322222 46789999999987765321
Q ss_pred CCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecC-CCCeeeeeEECCCCC
Q 007620 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TPAVYTAVEPSPDQK 187 (595)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt-~~~~~~~~~~SpDg~ 187 (595)
+ .|.++|+ +++. +.+. ....+..++|+|+|+
T Consensus 172 -------------------~---------------------------~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~ 205 (410)
T 1vyh_C 172 -------------------M---------------------------TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD 205 (410)
T ss_dssp -------------------S---------------------------CCCEEETTSSCEEECCCCCSSCEEEEEECSSSS
T ss_pred -------------------C---------------------------eEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCC
Confidence 1 1222333 2222 2222 223456899999999
Q ss_pred eEEEEEcccCccccccCcccceeEEEEcCCCce-EEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCC
Q 007620 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (595)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (595)
+|+..+.+ ..+.+||+.++. .+.+.... .....+.+++||.. ++..
T Consensus 206 ~l~s~s~D-------------~~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~~~~g~~-l~s~------ 252 (410)
T 1vyh_C 206 HIVSASRD-------------KTIKMWEVQTGYCVKTFTGHR-------------EWVRMVRPNQDGTL-IASC------ 252 (410)
T ss_dssp EEEEEETT-------------SEEEEEETTTCCEEEEEECCS-------------SCEEEEEECTTSSE-EEEE------
T ss_pred EEEEEeCC-------------CeEEEEECCCCcEEEEEeCCC-------------ccEEEEEECCCCCE-EEEE------
Confidence 88776532 378899987554 34433221 11235678888873 2221
Q ss_pred CcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCC--------------------CcEEEEEEeecccceE
Q 007620 267 DANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDD--------------------SLALVNETWYKTSQTR 325 (595)
Q Consensus 267 ~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspD--------------------g~~l~~~~~~~~~~~~ 325 (595)
.....+.+|+. ..++.. .+......+..+.|+|+ |..++... .++ .
T Consensus 253 ------s~D~~v~vwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs--~D~--~ 319 (410)
T 1vyh_C 253 ------SNDQTVRVWVV---ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS--RDK--T 319 (410)
T ss_dssp ------ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE--TTS--E
T ss_pred ------cCCCeEEEEEC---CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe--CCC--e
Confidence 11234666665 322332 23334445667788886 33455443 223 5
Q ss_pred EEEEeCCCCCCCcEEEeec--ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 326 TWLVCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 326 L~~~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
|.++|+.++. ....+..+ .+.. +.|+++|+.|+...
T Consensus 320 i~iwd~~~~~-~~~~~~~h~~~v~~---------v~~~~~g~~l~s~s 357 (410)
T 1vyh_C 320 IKMWDVSTGM-CLMTLVGHDNWVRG---------VLFHSGGKFILSCA 357 (410)
T ss_dssp EEEEETTTTE-EEEEEECCSSCEEE---------EEECSSSSCEEEEE
T ss_pred EEEEECCCCc-eEEEEECCCCcEEE---------EEEcCCCCEEEEEe
Confidence 7777887631 11222221 2222 78899999876554
No 110
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.73 E-value=1.2e-05 Score=81.78 Aligned_cols=229 Identities=10% Similarity=-0.014 Sum_probs=122.7
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc-------eEecccCCCccccccccceEEecC----C--
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------AKPLFESPDICLNAVFGSFVWVNN----S-- 98 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~-------~~~lt~~~~~~~~~~~~~~~Wspd----g-- 98 (595)
.+....|+| +.|+.... ...|.++++.+++ ...+..... .+..+.|+|+ |
T Consensus 18 ~i~~~~~~~--~~l~s~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCSG----------DGYLKVWDNKLLDNENPKDKSYSHFVHKS-----GLHHVDVLQAIERDAFE 80 (397)
T ss_dssp CEEEEEECS--SEEEEEET----------TSEEEEEESBCCTTCCGGGGEEEEECCTT-----CEEEEEEEEEEETTTEE
T ss_pred CeEEEEecC--CeEEEEcC----------CCEEEEEECCCcccccCCCcceEEecCCC-----cEEEEEEecccccCCcc
Confidence 577899999 55555432 3567777888876 444433332 5678999999 8
Q ss_pred -cEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC------eee
Q 007620 99 -TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT------AKD 170 (595)
Q Consensus 99 -~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~------~~~ 170 (595)
+.|+....+ ..|.++++ +++ ...
T Consensus 81 ~~~l~s~~~d-------------------------------------------------g~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 81 LCLVATTSFS-------------------------------------------------GDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp EEEEEEEETT-------------------------------------------------SCEEEEEEEECTTTCCEEEEE
T ss_pred ccEEEEEcCC-------------------------------------------------CCEEEEEccCCccccccccee
Confidence 877665211 12333333 222 333
Q ss_pred cCCC------CeeeeeEEC----CCCCe-EEEEEcccCccccccCcccceeEEEEcCCC------ce-EE-----Eecc-
Q 007620 171 FGTP------AVYTAVEPS----PDQKY-VLITSMHRPYSYKVPCARFSQKVQVWTTDG------KL-VR-----ELCD- 226 (595)
Q Consensus 171 lt~~------~~~~~~~~S----pDg~~-l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g------~~-~~-----~l~~- 226 (595)
+... ..+..++|+ |+++. |+..... ..+.+||+.. ++ .. .+..
T Consensus 112 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 178 (397)
T 1sq9_A 112 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------------GTTYIWKFHPFADESNSLTLNWSPTLELQGT 178 (397)
T ss_dssp ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEE
T ss_pred ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------------CcEEEEeCCccccccccceeeccCcceeeee
Confidence 3322 345688999 99999 7666532 3677888765 32 11 2210
Q ss_pred CCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCcee-ccc---c---Cc
Q 007620 227 LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK---L---DL 299 (595)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~-l~~---~---~~ 299 (595)
.... .........+.|+|++ .++.. .....+.++++ ..++... +.. . ..
T Consensus 179 ~~~~-------~~~~~~i~~~~~~~~~--~l~~~------------~~dg~i~i~d~---~~~~~~~~~~~~~~h~~~~~ 234 (397)
T 1sq9_A 179 VESP-------MTPSQFATSVDISERG--LIATG------------FNNGTVQISEL---STLRPLYNFESQHSMINNSN 234 (397)
T ss_dssp ECCS-------SSSCCCCCEEEECTTS--EEEEE------------CTTSEEEEEET---TTTEEEEEEECCC---CCCC
T ss_pred eccc-------cCCCCCceEEEECCCc--eEEEE------------eCCCcEEEEEC---CCCceeEEEeccccccccCC
Confidence 0000 0001123468899998 24332 12346777776 3233332 222 2 55
Q ss_pred cccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecc------------cccccCCCCCCCeeeCCCCCEE
Q 007620 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV------------FENVYSDPGSPMMTRTSTGTNV 367 (595)
Q Consensus 300 ~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~~~~~dg~~l 367 (595)
.+..+.|+|++..|+..... .....|.++|+.++ +....+... -... ...+.|+++|+.|
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d-~~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l 306 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDS-NSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSW-----VMSLSFNDSGETL 306 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEE-TTEEEEEEEETTTC--CEEEEECBC--------CCBSBSSC-----EEEEEECSSSSEE
T ss_pred ccceEEECCCCCEEEEEecC-CCCceEEEEECCCC--cccceeccCcccccccccccccCCc-----EEEEEECCCCCEE
Confidence 67789999999887665321 11137888898773 322222210 0000 0127899999987
Q ss_pred EEEe
Q 007620 368 IAKI 371 (595)
Q Consensus 368 ~~~~ 371 (595)
+...
T Consensus 307 ~~~~ 310 (397)
T 1sq9_A 307 CSAG 310 (397)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7654
No 111
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.72 E-value=4.6e-06 Score=83.40 Aligned_cols=202 Identities=10% Similarity=0.036 Sum_probs=111.9
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecC---CcEEEEEecCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN---STLLIFTIPSS 108 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspd---g~~l~~~~~~~ 108 (595)
.+...+|||||++++.+...+ .....|.++++.+++...+..... ...+..+.|+|+ |+.|+....+
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~------~~d~~v~iw~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~~d- 89 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFA------RGTGVIQLYEIQHGDLKLLREIEK---AKPIKCGTFGATSLQQRYLATGDFG- 89 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--------CCCEEEEEEEECSSSEEEEEEEEE---SSCEEEEECTTCCTTTCCEEEEETT-
T ss_pred ceEEEEEcCCCceEEEecCcc------CCCcEEEEEeCCCCcccceeeecc---cCcEEEEEEcCCCCCCceEEEecCC-
Confidence 588999999999888766421 124678888988887654432211 125678999998 5776664211
Q ss_pred CCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC--eeecCC-CCeeeee----
Q 007620 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--AKDFGT-PAVYTAV---- 180 (595)
Q Consensus 109 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~--~~~lt~-~~~~~~~---- 180 (595)
..|.++++ +++ ...+.. ...+..+
T Consensus 90 ------------------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 90 ------------------------------------------------GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp ------------------------------------------------SCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred ------------------------------------------------CeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 12334444 222 222221 1222333
Q ss_pred --EECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCce--EEEeccCCCCccCCccccccccCCCCce----eecC
Q 007620 181 --EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSIS----WRAD 252 (595)
Q Consensus 181 --~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~----wspd 252 (595)
+|+||++.|+..... ..+.+||+..+. ...+........ .....+. |+|+
T Consensus 122 ~~~~s~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRD-------------GTVKVWDPRQKDDPVANMEPVQGENK---------RDCWTVAFGNAYNQE 179 (357)
T ss_dssp GGGCC-CCCEEEEEETT-------------SCEEEECTTSCSSCSEEECCCTTSCC---------CCEEEEEEECCCC-C
T ss_pred ccccCCCccEEEEEeCC-------------CeEEEEeCCCCCCcceeccccCCCCC---------CceEEEEEEeccCCC
Confidence 678999998877542 368899987553 344332211000 0011233 7788
Q ss_pred CCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecC---CCcEEEEEEeecccceEEEEE
Q 007620 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD---DSLALVNETWYKTSQTRTWLV 329 (595)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wsp---Dg~~l~~~~~~~~~~~~L~~~ 329 (595)
+.. ++.. .....+.+++. ..++..........+..+.|+| ++..++... .++ .|.++
T Consensus 180 ~~~-l~~~------------~~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~--~dg--~i~i~ 239 (357)
T 3i2n_A 180 ERV-VCAG------------YDNGDIKLFDL---RNMALRWETNIKNGVCSLEFDRKDISMNKLVATS--LEG--KFHVF 239 (357)
T ss_dssp CCE-EEEE------------ETTSEEEEEET---TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEE--STT--EEEEE
T ss_pred CCE-EEEE------------ccCCeEEEEEC---ccCceeeecCCCCceEEEEcCCCCCCCCEEEEEC--CCC--eEEEE
Confidence 873 3222 11246777786 4334443444455678899999 888776653 224 45566
Q ss_pred eCCC
Q 007620 330 CPGS 333 (595)
Q Consensus 330 d~~~ 333 (595)
|+.+
T Consensus 240 d~~~ 243 (357)
T 3i2n_A 240 DMRT 243 (357)
T ss_dssp EEEE
T ss_pred eCcC
Confidence 6655
No 112
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.71 E-value=6.8e-06 Score=82.46 Aligned_cols=61 Identities=18% Similarity=0.328 Sum_probs=38.3
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
.+...+|||||++||..+. ++...|| ++..+....+..... ....+..+.|+|||+.|+..
T Consensus 63 ~v~~~~~sp~g~~l~s~s~--------D~~v~iw--~~~~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~ 123 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASF--------DATTCIW--KKNQDDFECVTTLEG--HENEVKSVAWAPSGNLLATC 123 (345)
T ss_dssp CEEEEEECTTSSEEEEEET--------TSCEEEE--EECCC-EEEEEEECC--CSSCEEEEEECTTSSEEEEE
T ss_pred cEEEEEECCCCCEEEEEEC--------CCcEEEE--EccCCCeEEEEEccC--CCCCceEEEEeCCCCEEEEE
Confidence 5788999999998877653 3445555 555554322221111 01146789999999988775
No 113
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.70 E-value=3.6e-05 Score=78.75 Aligned_cols=201 Identities=12% Similarity=0.196 Sum_probs=115.8
Q ss_pred eEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCccccccccccccc
Q 007620 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (595)
Q Consensus 62 ~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (595)
..|+++++.+++...+..... ...+..+.|+|||+.|+....+
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~---~~~v~~v~~s~~~~~l~~~~~d---------------------------------- 155 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDE---STYVASVKWSHDGSFLSVGLGN---------------------------------- 155 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCT---TCCEEEEEECTTSSEEEEEETT----------------------------------
T ss_pred CeEEEeeCCCCcEeEeeecCC---CCCEEEEEECCCCCEEEEECCC----------------------------------
Confidence 568888999998766654422 1256789999999988775211
Q ss_pred ccCcCCccceEEeecceEEEEcC-CCC-eeecCC-CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC-
Q 007620 142 LKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGT-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD- 217 (595)
Q Consensus 142 ~~~~~~~~~~~~~~~~~l~~~d~-~g~-~~~lt~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~- 217 (595)
..|.++++ +++ .+.+.. ...+..++| +++.|+.... ...+.+||+.
T Consensus 156 ---------------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-------------dg~i~i~d~~~ 205 (401)
T 4aez_A 156 ---------------GLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR-------------SGAIHHHDVRI 205 (401)
T ss_dssp ---------------SCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET-------------TSEEEEEETTS
T ss_pred ---------------CeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC-------------CCCEEEEeccc
Confidence 23444555 333 233322 234456777 5566665543 2378899987
Q ss_pred Cc-eEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-ecc
Q 007620 218 GK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILH 295 (595)
Q Consensus 218 g~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~ 295 (595)
++ ....+.... .....+.|+|++.. ++.. .....+.++|+ ..++.. .+.
T Consensus 206 ~~~~~~~~~~~~-------------~~v~~~~~~~~~~~-l~s~------------~~d~~v~iwd~---~~~~~~~~~~ 256 (401)
T 4aez_A 206 ANHQIGTLQGHS-------------SEVCGLAWRSDGLQ-LASG------------GNDNVVQIWDA---RSSIPKFTKT 256 (401)
T ss_dssp SSCEEEEEECCS-------------SCEEEEEECTTSSE-EEEE------------ETTSCEEEEET---TCSSEEEEEC
T ss_pred CcceeeEEcCCC-------------CCeeEEEEcCCCCE-EEEE------------eCCCeEEEccC---CCCCccEEec
Confidence 33 333332221 11346889999873 3322 11235677786 323333 333
Q ss_pred ccCccccceeecCCCcEEEEEEe-ecccceEEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 296 KLDLRFRSVSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 296 ~~~~~~~~~~wspDg~~l~~~~~-~~~~~~~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
.....+..+.|+|++..++.... ..++ .|.++|+.++ +....+. ..+.. +.|+++|+.++...
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~--~i~i~d~~~~--~~~~~~~~~~~v~~---------~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGGTMDK--QIHFWNAATG--ARVNTVDAGSQVTS---------LIWSPHSKEIMSTH 322 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECCTTTC--EEEEEETTTC--CEEEEEECSSCEEE---------EEECSSSSEEEEEE
T ss_pred CCcceEEEEEECCCCCCEEEEecCCCCC--EEEEEECCCC--CEEEEEeCCCcEEE---------EEECCCCCeEEEEe
Confidence 44556788999998865444321 1123 6888888773 3332222 22333 88999999887754
No 114
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.70 E-value=9.6e-06 Score=95.97 Aligned_cols=214 Identities=7% Similarity=0.032 Sum_probs=115.4
Q ss_pred eeEEEecCCCCCCCCce-eeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 6 GIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~-~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.|.|+|+. +|+.. .+.. ....+....|+|+++...+++.. ....|.++|+.+++.........
T Consensus 680 ~v~vwd~~----~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~--------~d~~v~vwd~~~~~~~~~~~~h~-- 743 (1249)
T 3sfz_A 680 KVKIWDSA----TGKLVHTYDE--HSEQVNCCHFTNKSNHLLLATGS--------NDFFLKLWDLNQKECRNTMFGHT-- 743 (1249)
T ss_dssp EEEEEETT----TCCEEEEEEC--CSSCEEEEEECSSSSCCEEEEEE--------TTSCEEEEETTSSSEEEEECCCS--
T ss_pred eEEEEECC----CCceEEEEcC--CCCcEEEEEEecCCCceEEEEEe--------CCCeEEEEECCCcchhheecCCC--
Confidence 47888887 55543 3442 23358889999976654443332 23557777998887544332221
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
..+..+.|+|||+.|+....+ |. .+.|.- . ....+..+..
T Consensus 744 --~~v~~~~~sp~~~~l~s~s~d----------------------g~---v~vwd~--~-----------~~~~~~~~~~ 783 (1249)
T 3sfz_A 744 --NSVNHCRFSPDDELLASCSAD----------------------GT---LRLWDV--R-----------SANERKSINV 783 (1249)
T ss_dssp --SCEEEEEECSSTTEEEEEESS----------------------SE---EEEEEG--G-----------GTEEEEEEEC
T ss_pred --CCEEEEEEecCCCEEEEEECC----------------------Ce---EEEEeC--C-----------CCcccceecc
Confidence 156789999999988775321 10 001100 0 0001111111
Q ss_pred CC-Cee---ec-CCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCcccc
Q 007620 165 DG-TAK---DF-GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYN 238 (595)
Q Consensus 165 ~g-~~~---~l-t~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~ 238 (595)
.. ... .. ........++|||||+.|++... ..+.+||+.++.. ..+....
T Consensus 784 ~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~--------------~~v~~~d~~~~~~~~~~~~~~---------- 839 (1249)
T 3sfz_A 784 KRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK--------------NKVLLFDIHTSGLLAEIHTGH---------- 839 (1249)
T ss_dssp CCCC--------CCCCCBCCCCBCTTSSEEEEEET--------------TEEEEEETTTCCEEEEEECSS----------
T ss_pred cccccccCCccccccceEEEEEECCCCCEEEEEcC--------------CcEEEEEecCCCceeEEcCCC----------
Confidence 00 000 00 00113457899999999988762 2688999875543 3332110
Q ss_pred ccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc-eeccccCccccceeecCCCcEEEEEE
Q 007620 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNET 317 (595)
Q Consensus 239 ~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~~~~~~~~~~wspDg~~l~~~~ 317 (595)
......+.|+|++.. ++.. .....+.+++. ..+.. ..+......+..+.|+|||..++...
T Consensus 840 --~~~v~~~~~sp~~~~-l~~~------------~~dg~v~vwd~---~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 840 --HSTIQYCDFSPYDHL-AVIA------------LSQYCVELWNI---DSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp --SSCCCEEEECSSTTE-EEEE------------CSSSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred --CCceEEEEEcCCCCE-EEEE------------eCCCeEEEEEc---CCCceeeecCCCccceEEEEECCCCCEEEEEe
Confidence 012346789999883 3222 12235666675 32222 22333445677899999998877654
No 115
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.70 E-value=3.2e-05 Score=78.39 Aligned_cols=92 Identities=13% Similarity=-0.123 Sum_probs=52.0
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCC-Ccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP-DIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~-~~~ 84 (595)
.+++.|+. +++... .++.+... .+.+||||++|++................|.++|+++++...-.... ...
T Consensus 48 ~v~v~D~~----t~~~~~--~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~ 120 (373)
T 2mad_H 48 QQWVLDAG----SGSILG--HVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR 120 (373)
T ss_pred EEEEEECC----CCeEEE--EecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence 34666776 555432 24455444 99999999998776431100000012356889999877643321111 000
Q ss_pred c--cccccceEEecCCcEEEEE
Q 007620 85 L--NAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 85 ~--~~~~~~~~Wspdg~~l~~~ 104 (595)
. ......+.|||||++|++.
T Consensus 121 ~~~g~~p~~~~~spDG~~l~v~ 142 (373)
T 2mad_H 121 FDVGPYSWMNANTPNNADLLFF 142 (373)
T ss_pred cccCCCccceEECCCCCEEEEE
Confidence 0 0013478999999999886
No 116
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.69 E-value=1.5e-05 Score=77.91 Aligned_cols=241 Identities=9% Similarity=0.018 Sum_probs=132.5
Q ss_pred CCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecC
Q 007620 18 LGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN 97 (595)
Q Consensus 18 ~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspd 97 (595)
+.+.+.+.. .......|.|+|||+.|+|+... ...|++++++++ .+.+..... ....+.+++|
T Consensus 17 ~~~~~~l~~--~~~~~eg~~~d~~g~~l~~~~~~---------~~~i~~~~~~~~-~~~~~~~~~-----~~~~l~~~~d 79 (296)
T 3e5z_A 17 GAEARRLAD--GFTWTEGPVYVPARSAVIFSDVR---------QNRTWAWSDDGQ-LSPEMHPSH-----HQNGHCLNKQ 79 (296)
T ss_dssp TCCCEEEEC--CCSSEEEEEEEGGGTEEEEEEGG---------GTEEEEEETTSC-EEEEESSCS-----SEEEEEECTT
T ss_pred CCcEEEEec--CCccccCCeEeCCCCEEEEEeCC---------CCEEEEEECCCC-eEEEECCCC-----CcceeeECCC
Confidence 455566663 23346789999999988887643 468999999888 655543222 3557899999
Q ss_pred CcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeecCCC--
Q 007620 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-- 174 (595)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~~-- 174 (595)
|++++... ....|++++. +|+.+.+...
T Consensus 80 g~l~v~~~-------------------------------------------------~~~~i~~~d~~~g~~~~~~~~~~ 110 (296)
T 3e5z_A 80 GHLIACSH-------------------------------------------------GLRRLERQREPGGEWESIADSFE 110 (296)
T ss_dssp CCEEEEET-------------------------------------------------TTTEEEEECSTTCCEEEEECEET
T ss_pred CcEEEEec-------------------------------------------------CCCeEEEEcCCCCcEEEEeeccC
Confidence 98544320 0134666777 6665544221
Q ss_pred ----CeeeeeEECCCCCeEEEEEcc----cCccccc-cCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCC
Q 007620 175 ----AVYTAVEPSPDQKYVLITSMH----RPYSYKV-PCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR 245 (595)
Q Consensus 175 ----~~~~~~~~SpDg~~l~~~~~~----~~~~~~~-~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 245 (595)
.....++++|||+ |+++... ....... ........|+.++.. ++.+.+.... ....
T Consensus 111 ~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~~ 175 (296)
T 3e5z_A 111 GKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-------------VKPN 175 (296)
T ss_dssp TEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-------------SSEE
T ss_pred CCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-------------CCCc
Confidence 1224688999997 4454210 0000000 000012378888887 4444432211 1123
Q ss_pred CceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc---eeccc-cCccccceeecCCCcEEEEEEeecc
Q 007620 246 SISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHK-LDLRFRSVSWCDDSLALVNETWYKT 321 (595)
Q Consensus 246 ~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~---~~l~~-~~~~~~~~~wspDg~~l~~~~~~~~ 321 (595)
.+.|+|||+. + +. + .....+++++. ...|+. ..+.. .......+.+++||..++..
T Consensus 176 gi~~s~dg~~-l-v~---~--------~~~~~i~~~~~--~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~----- 235 (296)
T 3e5z_A 176 GLAFLPSGNL-L-VS---D--------TGDNATHRYCL--NARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA----- 235 (296)
T ss_dssp EEEECTTSCE-E-EE---E--------TTTTEEEEEEE--CSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-----
T ss_pred cEEECCCCCE-E-EE---e--------CCCCeEEEEEE--CCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-----
Confidence 5789999983 3 33 1 11235666664 112343 12221 12234568899999865554
Q ss_pred cceEEEEEeCCCCCCCcEEEe-ecccccccCCCCCCCeee-CCCCCEEEEEe
Q 007620 322 SQTRTWLVCPGSKDVAPRVLF-DRVFENVYSDPGSPMMTR-TSTGTNVIAKI 371 (595)
Q Consensus 322 ~~~~L~~~d~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~ 371 (595)
...|+++++++ .....+. ...+.. +.+ +++++.|++..
T Consensus 236 -~~~v~~~~~~g--~~~~~~~~~~~~~~---------~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 236 -GDGVHVLTPDG--DELGRVLTPQTTSN---------LCFGGPEGRTLYMTV 275 (296)
T ss_dssp -TTEEEEECTTS--CEEEEEECSSCCCE---------EEEESTTSCEEEEEE
T ss_pred -CCeEEEECCCC--CEEEEEECCCCcee---------EEEECCCCCEEEEEc
Confidence 12789999875 2222221 111222 566 57888888775
No 117
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.69 E-value=6.7e-06 Score=84.14 Aligned_cols=200 Identities=18% Similarity=0.162 Sum_probs=113.0
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~ 112 (595)
+...+|||||++||.... ...|.++|+.+++......... ..+..+.|+|+++.|+....+
T Consensus 126 v~~v~~s~dg~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~p~~~~l~s~s~d----- 186 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAE----------DRLIRIWDIENRKIVMILQGHE----QDIYSLDYFPSGDKLVSGSGD----- 186 (393)
T ss_dssp EEEEEECTTSSEEEEEET----------TSCEEEEETTTTEEEEEECCCS----SCEEEEEECTTSSEEEEEETT-----
T ss_pred EEEEEECCCCCEEEEEcC----------CCeEEEEECCCCcEEEEEccCC----CCEEEEEEcCCCCEEEEecCC-----
Confidence 667899999999876542 2457777998887654433221 146789999999988764211
Q ss_pred CCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecCCCCeeeeeEECC-CCCeE
Q 007620 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYTAVEPSP-DQKYV 189 (595)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt~~~~~~~~~~Sp-Dg~~l 189 (595)
..+.++|+ +++. ..+........++|+| ||+.|
T Consensus 187 --------------------------------------------~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 187 --------------------------------------------RTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp --------------------------------------------SEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred --------------------------------------------CcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEE
Confidence 23444455 3432 2232333456789999 88888
Q ss_pred EEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCc
Q 007620 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (595)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (595)
+....+ ..+.+||+.++.. ..+...... ..+.......+.|+|||+. |+..
T Consensus 223 ~~~s~d-------------~~v~iwd~~~~~~~~~~~~~~~~------~~~h~~~v~~v~~~~~g~~-l~s~-------- 274 (393)
T 1erj_A 223 AAGSLD-------------RAVRVWDSETGFLVERLDSENES------GTGHKDSVYSVVFTRDGQS-VVSG-------- 274 (393)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSE-EEEE--------
T ss_pred EEEcCC-------------CcEEEEECCCCcEEEeecccccC------CCCCCCCEEEEEECCCCCE-EEEE--------
Confidence 777542 3688999876543 333211000 0011112345789999873 3221
Q ss_pred ccccCCcceEEeccCCCCCCCC------------c-eeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 269 NVEVSPRDIIYTQPAEPAEGEK------------P-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 269 ~~~~~~~~~~~~~d~~~~~g~~------------~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
.....+.+||+ .... . ..+......+..+.|+|++..|+... .++ .|.++|+.++
T Consensus 275 ----s~d~~v~~wd~---~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs--~D~--~v~iwd~~~~ 342 (393)
T 1erj_A 275 ----SLDRSVKLWNL---QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS--KDR--GVLFWDKKSG 342 (393)
T ss_dssp ----ETTSEEEEEEC------------------CEEEEEECCSSCEEEEEECGGGCEEEEEE--TTS--EEEEEETTTC
T ss_pred ----eCCCEEEEEEC---CCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe--CCC--eEEEEECCCC
Confidence 11234555564 2111 0 11222233456788999998877654 223 5777788773
No 118
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.69 E-value=1.6e-05 Score=87.81 Aligned_cols=228 Identities=13% Similarity=0.079 Sum_probs=129.1
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc------eEecccCCCccccccccceEEecCCcEEEEEe
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE------AKPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~------~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~ 105 (595)
.+...+|+|++..+.++... ++ .|.++++..+. .+.++.... .+..+.|+|||+.|+...
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~-------D~--~i~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASR-------DK--SIILWKLTKDDKAYGVAQRRLTGHSH-----FVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CEEEEECCTTCCSEEEEEET-------TS--EEEEEECCCSTTCSCEEEEEEECCSS-----CEEEEEECTTSSEEEEEE
T ss_pred eeEEEEecCCCCCEEEEEeC-------CC--cEEEEEccCCCcccccccceecCCCC-----cEEEEEECCCCCEEEEEe
Confidence 48888999988666666543 33 44455665422 233433332 467899999999887652
Q ss_pred cCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC-eeecC-CCCeeeeeEE
Q 007620 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFG-TPAVYTAVEP 182 (595)
Q Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~-~~~lt-~~~~~~~~~~ 182 (595)
. ...|.++|+ ++. .+.+. ....+..++|
T Consensus 450 ~-------------------------------------------------Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 450 W-------------------------------------------------DGELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp T-------------------------------------------------TSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred C-------------------------------------------------CCcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 1 123445555 442 23332 3345668999
Q ss_pred CCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEe
Q 007620 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (595)
Q Consensus 183 SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~ 262 (595)
||||++|+..+.+ ..|.+||+.+.....+..... ++......+.|+|++...+... .
T Consensus 481 s~~~~~l~s~s~D-------------~~i~iwd~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~~l~s-~ 537 (694)
T 3dm0_A 481 SLDNRQIVSASRD-------------RTIKLWNTLGECKYTISEGGE---------GHRDWVSCVRFSPNTLQPTIVS-A 537 (694)
T ss_dssp CTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSSTT---------SCSSCEEEEEECSCSSSCEEEE-E
T ss_pred eCCCCEEEEEeCC-------------CEEEEEECCCCcceeeccCCC---------CCCCcEEEEEEeCCCCcceEEE-E
Confidence 9999998877642 368899987766555432210 0111123577888874322222 1
Q ss_pred ecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEE
Q 007620 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (595)
Q Consensus 263 ~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l 341 (595)
.....+.++|+ ..++.. .+......+..+.|+|||..|+... .++ .|.++|+.++ +.+
T Consensus 538 ----------s~d~~v~vwd~---~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~--~Dg--~i~iwd~~~~----~~~ 596 (694)
T 3dm0_A 538 ----------SWDKTVKVWNL---SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG--KDG--VVLLWDLAEG----KKL 596 (694)
T ss_dssp ----------ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEE--TTS--BCEEEETTTT----EEE
T ss_pred ----------eCCCeEEEEEC---CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEe--CCC--eEEEEECCCC----ceE
Confidence 11235667776 333333 3434455678899999999877654 234 4556677663 233
Q ss_pred eecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
......... ..+.|+|++..+....
T Consensus 597 ~~~~~~~~v-----~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 597 YSLEANSVI-----HALCFSPNRYWLCAAT 621 (694)
T ss_dssp ECCBCSSCE-----EEEEECSSSSEEEEEE
T ss_pred EEecCCCcE-----EEEEEcCCCcEEEEEc
Confidence 211111101 1278999998766543
No 119
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.69 E-value=2e-05 Score=79.41 Aligned_cols=305 Identities=14% Similarity=0.104 Sum_probs=151.4
Q ss_pred eEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCc
Q 007620 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (595)
Q Consensus 36 ~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~ 115 (595)
....|||++|+ +.+.... .....|+++|.++++...-..... ... +..||||+.|++.....
T Consensus 38 ~~~~pd~~~vy-V~~~~~~----~~~~~V~ViD~~t~~v~~~I~vG~-----~P~-va~spDG~~lyVan~~~------- 99 (386)
T 3sjl_D 38 EAPAPDARRVY-VNDPAHF----AAVTQQFVIDGEAGRVIGMIDGGF-----LPN-PVVADDGSFIAHASTVF------- 99 (386)
T ss_dssp CCCCCCTTEEE-EEECGGG----CSSEEEEEEETTTTEEEEEEEECS-----SCE-EEECTTSSCEEEEEEEE-------
T ss_pred eccCCCCCEEE-EEcCccc----CCCCEEEEEECCCCeEEEEEECCC-----CCc-EEECCCCCEEEEEcccc-------
Confidence 34479999864 4442100 124789999999887543322121 234 89999999988852100
Q ss_pred cccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eec--CC------CCeeeeeEECCC
Q 007620 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDF--GT------PAVYTAVEPSPD 185 (595)
Q Consensus 116 ~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~l--t~------~~~~~~~~~SpD 185 (595)
.. + . +.+ ....|.++|. ++++ ..| .. ...-..+.+|||
T Consensus 100 -----------~r-~-------~-------~G~------~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spD 147 (386)
T 3sjl_D 100 -----------SR-I-------A-------RGE------RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD 147 (386)
T ss_dssp -----------EE-T-------T-------EEE------EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT
T ss_pred -----------cc-c-------c-------cCC------CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCC
Confidence 00 0 0 000 1346788888 5543 233 21 012346899999
Q ss_pred CCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCC-CceeecCCCeeEEEEEee
Q 007620 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMR-SISWRADKPSTLYWVEAQ 263 (595)
Q Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~-~~~wspdg~~~l~~~~~~ 263 (595)
|++|++.... + ...+.++|+.++++ ..+ ..+.... ....+.+ .+..++||+ ++++. .
T Consensus 148 Gk~lyVan~~-~----------~~~VsVID~~t~~vv~tI-~v~g~~~------~~P~g~~~~~~~~~DG~--~~~v~-~ 206 (386)
T 3sjl_D 148 GKTLLFYQFS-P----------APAVGVVDLEGKAFKRML-DVPDCYH------IFPTAPDTFFMHCRDGS--LAKVA-F 206 (386)
T ss_dssp SSEEEEEECS-S----------SCEEEEEETTTTEEEEEE-ECCSEEE------EEEEETTEEEEEETTSC--EEEEE-C
T ss_pred CCEEEEEEcC-C----------CCeEEEEECCCCcEEEEE-ECCCcce------eecCCCceeEEECCCCC--EEEEE-C
Confidence 9999887432 1 23789999987765 333 2111000 0001111 134567765 33331 1
Q ss_pred cCCCcccccCCcceEEeccCCCCCCCCce----eccc--cCccccceeec-CCCcEEEEEEeecccceEEEEEeCCCCCC
Q 007620 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPE----ILHK--LDLRFRSVSWC-DDSLALVNETWYKTSQTRTWLVCPGSKDV 336 (595)
Q Consensus 264 d~~~~~~~~~~~~~~~~~d~~~~~g~~~~----~l~~--~~~~~~~~~ws-pDg~~l~~~~~~~~~~~~L~~~d~~~~~~ 336 (595)
+. . ++.. .+.. ....+..+.|. +||+.+ |... .+ .++.+|+.+.
T Consensus 207 ~~---------------------~-g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~-~vs~--~g--~V~v~d~~~~-- 257 (386)
T 3sjl_D 207 GT---------------------E-GTPEITHTEVFHPEDEFLINHPAYSQKAGRLV-WPTY--TG--KIHQIDLSSG-- 257 (386)
T ss_dssp CS---------------------S-SCCEEEECCCCSCTTSCBCSCCEEETTTTEEE-EEBT--TS--EEEEEECTTS--
T ss_pred CC---------------------C-CeEEEeecceeccccccccccceeEcCCCcEE-EEeC--CC--EEEEEECCCC--
Confidence 10 0 1110 0111 11122345674 678643 3321 23 7999999873
Q ss_pred CcEEEeeccc-c----cccCCCC-CCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeee
Q 007620 337 APRVLFDRVF-E----NVYSDPG-SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (595)
Q Consensus 337 ~~~~l~~~~~-~----~~~~~~~-~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (595)
..+.+-..++ . ..-..|+ ...+..+++++.+|+.....+ .+ +....-..+..+|+++++..+-
T Consensus 258 ~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~----------~~-~hk~~~~~V~viD~~t~kv~~~ 326 (386)
T 3sjl_D 258 DAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRD----------EW-RHKTASRFVVVLDAKTGERLAK 326 (386)
T ss_dssp SCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECC----------TT-CTTSCEEEEEEEETTTCCEEEE
T ss_pred cceeecceeccccccccccccCCCcceeeECCCCCeEEEEecccc----------cc-ccCCCCCEEEEEECCCCeEEEE
Confidence 3333311110 0 0000122 234667788888887653211 00 0011111244689988886554
Q ss_pred eecCccccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCCCCcee
Q 007620 411 WESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (595)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~~~~~~ 465 (595)
+... ..+. +..+++|++.++|... .....+.++|..+++..
T Consensus 327 i~vg-----~~~~-------~lavs~D~~~~ly~tn--~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 327 FEMG-----HEID-------SINVSQDEKPLLYALS--TGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEEE-----EEEC-------EEEECSSSSCEEEEEE--TTTTEEEEEETTTCCEE
T ss_pred EECC-----CCcc-------eEEECCCCCeEEEEEc--CCCCeEEEEECCCCcEE
Confidence 3221 1111 1457889874444432 33577999998877653
No 120
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.68 E-value=2.8e-06 Score=87.08 Aligned_cols=249 Identities=13% Similarity=0.037 Sum_probs=134.3
Q ss_pred eeEEEecCCCCCCCC----ceeeecCCCCCcccceEEcc-CCCEEEEEEecccccccCCCceEEEEEECCCCc-------
Q 007620 6 GIGIHRLLPDDSLGP----EKEVHGYPDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE------- 73 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~----~~~lt~~~~~~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~------- 73 (595)
.|.|+++.. .++ ...+.+ ....+....|+| +++.||.... + ..|.++++.++.
T Consensus 58 ~i~v~~~~~---~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~--------d--g~v~vw~~~~~~~~~~~~~ 122 (402)
T 2aq5_A 58 AFLVLPLGK---TGRVDKNVPLVCG--HTAPVLDIAWCPHNDNVIASGSE--------D--CTVMVWEIPDGGLVLPLRE 122 (402)
T ss_dssp CEEEEETTC---CEECCTTCCCBCC--CSSCEEEEEECTTCTTEEEEEET--------T--SEEEEEECCTTCCSSCBCS
T ss_pred EEEEEECcc---CCCCCCCCceEec--CCCCEEEEEeCCCCCCEEEEEeC--------C--CeEEEEEccCCCCccccCC
Confidence 577888852 322 122332 223588999999 8887766542 2 456666877663
Q ss_pred -eEecccCCCccccccccceEEecCCc-EEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccce
Q 007620 74 -AKPLFESPDICLNAVFGSFVWVNNST-LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLF 151 (595)
Q Consensus 74 -~~~lt~~~~~~~~~~~~~~~Wspdg~-~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 151 (595)
...+..... .+..+.|+|+++ .|+....
T Consensus 123 ~~~~~~~h~~-----~v~~~~~~p~~~~~l~s~~~--------------------------------------------- 152 (402)
T 2aq5_A 123 PVITLEGHTK-----RVGIVAWHPTAQNVLLSAGC--------------------------------------------- 152 (402)
T ss_dssp CSEEEECCSS-----CEEEEEECSSBTTEEEEEET---------------------------------------------
T ss_pred ceEEecCCCC-----eEEEEEECcCCCCEEEEEcC---------------------------------------------
Confidence 223322222 567899999995 4444311
Q ss_pred EEeecceEEEEcC-CCC-eeec--C-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEe-
Q 007620 152 DYYTTAQLVLGSL-DGT-AKDF--G-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-REL- 224 (595)
Q Consensus 152 ~~~~~~~l~~~d~-~g~-~~~l--t-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l- 224 (595)
...|.++|+ +++ ...+ . ....+..++|+|||+.|+....+ ..|.+||+.+++. ..+
T Consensus 153 ----dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~ 215 (402)
T 2aq5_A 153 ----DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-------------KRVRVIEPRKGTVVAEKD 215 (402)
T ss_dssp ----TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-------------SEEEEEETTTTEEEEEEE
T ss_pred ----CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-------------CcEEEEeCCCCceeeeec
Confidence 123555666 443 3334 2 23456789999999999887642 3789999886654 333
Q ss_pred ccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecc--ccCcccc
Q 007620 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFR 302 (595)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~--~~~~~~~ 302 (595)
..... .....+.|+||++ ++...+.. .....+.++|+ ..+..+..+. .....+.
T Consensus 216 ~~~~~------------~~~~~~~~~~~~~--~l~~g~~~--------~~d~~i~iwd~--~~~~~~~~~~~~~~~~~v~ 271 (402)
T 2aq5_A 216 RPHEG------------TRPVHAVFVSEGK--ILTTGFSR--------MSERQVALWDT--KHLEEPLSLQELDTSSGVL 271 (402)
T ss_dssp CSSCS------------SSCCEEEECSTTE--EEEEEECT--------TCCEEEEEEET--TBCSSCSEEEECCCCSSCE
T ss_pred cCCCC------------CcceEEEEcCCCc--EEEEeccC--------CCCceEEEEcC--ccccCCceEEeccCCCcee
Confidence 11110 0123578999976 22221100 12346777776 2222222222 2334567
Q ss_pred ceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEE
Q 007620 303 SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVI 368 (595)
Q Consensus 303 ~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~ 368 (595)
.+.|+||+..++.... .++ .|.++|+.+++.....+......... ..+.|+|+|..++
T Consensus 272 ~~~~s~~~~~l~~~g~-~dg--~i~i~d~~~~~~~~~~l~~~~~~~~v-----~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 272 LPFFDPDTNIVYLCGK-GDS--SIRYFEITSEAPFLHYLSMFSSKESQ-----RGMGYMPKRGLEV 329 (402)
T ss_dssp EEEEETTTTEEEEEET-TCS--CEEEEEECSSTTCEEEEEEECCSSCC-----SEEEECCGGGSCG
T ss_pred EEEEcCCCCEEEEEEc-CCC--eEEEEEecCCCcceEeecccccCCcc-----cceEEecccccce
Confidence 8899999987654421 223 45566666631112333222111111 1278888887543
No 121
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.67 E-value=6.8e-06 Score=85.19 Aligned_cols=125 Identities=7% Similarity=0.084 Sum_probs=64.8
Q ss_pred eeeeeEECCCC-CeEEEEEcccCccccccCcccceeEEEEcCCCceE-----EEeccCCCCccCCccccccccCCCCcee
Q 007620 176 VYTAVEPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-----RELCDLPPAEDIPVCYNSVREGMRSISW 249 (595)
Q Consensus 176 ~~~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~w 249 (595)
.+..++|+|+| +.|+....+ ..|.+||+.++.. +.+.......... .+.+.......+.|
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~ 293 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSK-------------GTIRLCDMRASALCDRHSKLFEEPEDPSNRS-FFSEIISSISDVKF 293 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETT-------------SCEEEEETTTCSSSCTTCEEECCC-----CC-HHHHHTTCEEEEEE
T ss_pred ceEEEEECCCCCcEEEEEeCC-------------CeEEEEECcCCccccceeeEeccCCCccccc-cccccCceEEEEEE
Confidence 45689999999 666666532 3688999876553 3332211000000 00000002346889
Q ss_pred ecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-eccccCcc---------------ccceeecCCCcEE
Q 007620 250 RADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLR---------------FRSVSWCDDSLAL 313 (595)
Q Consensus 250 spdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~---------------~~~~~wspDg~~l 313 (595)
+|+|+. |+.. .. ..+.++|+ ...++.. .+...... ...+.|+||+..|
T Consensus 294 s~~g~~-l~~~------------~~-~~v~iwd~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l 357 (447)
T 3dw8_B 294 SHSGRY-MMTR------------DY-LSVKVWDL--NMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV 357 (447)
T ss_dssp CTTSSE-EEEE------------ES-SEEEEEET--TCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE
T ss_pred CCCCCE-EEEe------------eC-CeEEEEeC--CCCccccceeeccccccccccccccccccccceEEEECCCCCEE
Confidence 999884 3221 11 45677775 1112322 22211110 1238999999987
Q ss_pred EEEEeecccceEEEEEeCCCC
Q 007620 314 VNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 314 ~~~~~~~~~~~~L~~~d~~~~ 334 (595)
+... .++ .|+++|+.++
T Consensus 358 ~s~s--~dg--~v~iwd~~~~ 374 (447)
T 3dw8_B 358 MTGS--YNN--FFRMFDRNTK 374 (447)
T ss_dssp EEEC--STT--EEEEEETTTC
T ss_pred EEec--cCC--EEEEEEcCCC
Confidence 6653 223 6777788773
No 122
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.66 E-value=6.3e-06 Score=80.81 Aligned_cols=230 Identities=8% Similarity=0.011 Sum_probs=126.4
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~ 112 (595)
...|.|+|+++.|+|+-. ....|+++++++++.+.+.. .. .+..+.+++||++++..
T Consensus 15 ~Egp~w~~~~~~l~~~d~---------~~~~i~~~d~~~~~~~~~~~-~~-----~~~~i~~~~dG~l~v~~-------- 71 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDI---------PAKKVCRWDSFTKQVQRVTM-DA-----PVSSVALRQSGGYVATI-------- 71 (297)
T ss_dssp EEEEEEETTTTEEEEEET---------TTTEEEEEETTTCCEEEEEC-SS-----CEEEEEEBTTSSEEEEE--------
T ss_pred ccCCeEECCCCEEEEEEC---------CCCEEEEEECCCCcEEEEeC-CC-----ceEEEEECCCCCEEEEE--------
Confidence 447999999999988753 34789999999887654422 22 45688999999943322
Q ss_pred CCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeecCC-----C-CeeeeeEECCC
Q 007620 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT-----P-AVYTAVEPSPD 185 (595)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~-----~-~~~~~~~~SpD 185 (595)
...|++++. +++.+.+.. + .....+.++||
T Consensus 72 -------------------------------------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d 108 (297)
T 3g4e_A 72 -------------------------------------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA 108 (297)
T ss_dssp -------------------------------------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT
T ss_pred -------------------------------------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC
Confidence 123555555 344433321 1 12457899999
Q ss_pred CCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecC
Q 007620 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (595)
Q Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~ 265 (595)
|+ |++.......... ........|+.++.++.......... ....+.|+||++. ||+...
T Consensus 109 G~-l~~~~~~~~~~~~-~~~~~~~~l~~~d~~g~~~~~~~~~~--------------~pngi~~spdg~~-lyv~~~--- 168 (297)
T 3g4e_A 109 GR-YFAGTMAEETAPA-VLERHQGALYSLFPDHHVKKYFDQVD--------------ISNGLDWSLDHKI-FYYIDS--- 168 (297)
T ss_dssp SC-EEEEEEECCSBTT-BCCTTCEEEEEECTTSCEEEEEEEES--------------BEEEEEECTTSCE-EEEEEG---
T ss_pred CC-EEEecCCcccccc-cccCCCcEEEEEECCCCEEEEeeccc--------------cccceEEcCCCCE-EEEecC---
Confidence 98 5555432210000 00011347888887754433322110 1235889999973 665521
Q ss_pred CCcccccCCcceEEeccCCCCCCCCce---eccc---cCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcE
Q 007620 266 GDANVEVSPRDIIYTQPAEPAEGEKPE---ILHK---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (595)
Q Consensus 266 ~~~~~~~~~~~~~~~~d~~~~~g~~~~---~l~~---~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~ 339 (595)
....+++++.++.+ |... .+.. ..+....+.+.++|..++... ....|+++|++++ +..
T Consensus 169 --------~~~~i~~~~~d~~~-G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~----~~~~v~~~d~~tG--~~~ 233 (297)
T 3g4e_A 169 --------LSYSVDAFDYDLQT-GQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY----NGGRVIRLDPVTG--KRL 233 (297)
T ss_dssp --------GGTEEEEEEECTTT-CCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE----TTTEEEEECTTTC--CEE
T ss_pred --------CCCcEEEEeccCCC-CcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc----CCCEEEEEcCCCc--eEE
Confidence 12345555531123 2321 1221 123345677888887655542 1236999999863 222
Q ss_pred EEee---cccccccCCCCCCCeeeC-CCCCEEEEEee
Q 007620 340 VLFD---RVFENVYSDPGSPMMTRT-STGTNVIAKIK 372 (595)
Q Consensus 340 ~l~~---~~~~~~~~~~~~~~~~~~-~dg~~l~~~~~ 372 (595)
.... ..+.. +.+. +|++.||++..
T Consensus 234 ~~i~~p~~~~t~---------~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 234 QTVKLPVDKTTS---------CCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEECSSSBEEE---------EEEESGGGCEEEEEEB
T ss_pred EEEECCCCCceE---------EEEeCCCCCEEEEEcC
Confidence 2221 12222 6676 78888887764
No 123
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.66 E-value=6.1e-05 Score=80.62 Aligned_cols=322 Identities=10% Similarity=-0.005 Sum_probs=161.6
Q ss_pred eeEEEecCCCCCCCCce-eeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECC--CCce-EecccCC
Q 007620 6 GIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEA-KPLFESP 81 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~-~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~--~g~~-~~lt~~~ 81 (595)
.|++.|+. +++.. .|. .+.....+.+||||++|+. ..+ ...|.++|+. +++. .++ .
T Consensus 178 ~V~viD~~----t~~v~~~i~---~g~~p~~v~~SpDGr~lyv-~~~---------dg~V~viD~~~~t~~~v~~i---~ 237 (567)
T 1qks_A 178 QIALIDGS----TYEIKTVLD---TGYAVHISRLSASGRYLFV-IGR---------DGKVNMIDLWMKEPTTVAEI---K 237 (567)
T ss_dssp EEEEEETT----TCCEEEEEE---CSSCEEEEEECTTSCEEEE-EET---------TSEEEEEETTSSSCCEEEEE---E
T ss_pred eEEEEECC----CCeEEEEEe---CCCCccceEECCCCCEEEE-EcC---------CCeEEEEECCCCCCcEeEEE---e
Confidence 46777776 55544 333 3334668999999998654 432 2479999995 5543 222 1
Q ss_pred CccccccccceEEe----cCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecc
Q 007620 82 DICLNAVFGSFVWV----NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (595)
Q Consensus 82 ~~~~~~~~~~~~Ws----pdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (595)
.+ .....+.+| |||++|++... ...
T Consensus 238 ~G---~~P~~ia~s~~~~pDGk~l~v~n~------------------------------------------------~~~ 266 (567)
T 1qks_A 238 IG---SEARSIETSKMEGWEDKYAIAGAY------------------------------------------------WPP 266 (567)
T ss_dssp CC---SEEEEEEECCSTTCTTTEEEEEEE------------------------------------------------ETT
T ss_pred cC---CCCceeEEccccCCCCCEEEEEEc------------------------------------------------cCC
Confidence 11 123478899 69999887521 012
Q ss_pred eEEEEcC-CCCeee-cCC------------CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEE
Q 007620 158 QLVLGSL-DGTAKD-FGT------------PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE 223 (595)
Q Consensus 158 ~l~~~d~-~g~~~~-lt~------------~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~ 223 (595)
++.++|. +.++.. +.. ......+..|+++..+++.... ...|+++|....+...
T Consensus 267 ~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~------------~g~v~~vd~~~~~~~~ 334 (567)
T 1qks_A 267 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE------------TGKILLVDYTDLNNLK 334 (567)
T ss_dssp EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEETTCSSEEE
T ss_pred eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC------------CCeEEEEecCCCccce
Confidence 3444454 223221 110 1123456778887766655421 3478888876543222
Q ss_pred eccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecccc-C--cc
Q 007620 224 LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-D--LR 300 (595)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~-~--~~ 300 (595)
+...+.. .......|+|||+. ++.. . ...+.+.++|. ..++...+... . ..
T Consensus 335 v~~i~~~-----------~~~~d~~~~pdgr~-~~va-~----------~~sn~V~ViD~---~t~kl~~~i~vgg~~Ph 388 (567)
T 1qks_A 335 TTEISAE-----------RFLHDGGLDGSHRY-FITA-A----------NARNKLVVIDT---KEGKLVAIEDTGGQTPH 388 (567)
T ss_dssp EEEEECC-----------SSEEEEEECTTSCE-EEEE-E----------GGGTEEEEEET---TTTEEEEEEECSSSSBC
T ss_pred eeeeecc-----------ccccCceECCCCCE-EEEE-e----------CCCCeEEEEEC---CCCcEEEEEeccCcCCC
Confidence 2221110 11235679999984 3332 1 22356777886 33344332222 1 11
Q ss_pred c-cceee-cCCCcEEEEEEeecccceEEEEEeCCCCCC---CcEEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecC
Q 007620 301 F-RSVSW-CDDSLALVNETWYKTSQTRTWLVCPGSKDV---APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 375 (595)
Q Consensus 301 ~-~~~~w-spDg~~l~~~~~~~~~~~~L~~~d~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~ 375 (595)
. ..+.| .|++..+...... +...|-++|.++... ..+.+-.-.... .+..++..+|+|+.+|+...-..
T Consensus 389 pg~g~~~~~p~~g~v~~t~~~--g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g----~g~~~i~~~p~~~~l~v~~~~~~ 462 (567)
T 1qks_A 389 PGRGANFVHPTFGPVWATSHM--GDDSVALIGTDPEGHPDNAWKILDSFPALG----GGSLFIKTHPNSQYLYVDATLNP 462 (567)
T ss_dssp CTTCEEEEETTTEEEEEEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEECSC----SCCCCEECCTTCSEEEEECTTCS
T ss_pred CccceeeECCCCCcEEEeCCC--CCCeEEEecCCCCCCccccCEEEEEEecCC----CCCEEEEeCCCCCeEEEecCCCC
Confidence 1 23344 6775544333211 223688888776311 122221101100 12234667899999887652110
Q ss_pred Cc--ccEEEEecCCCCCCCCcceeEeeecCCC-----ce--eeeeecC---ccccceeeEEeeeCCCcccccccCCEEEE
Q 007620 376 DE--QIYILLNGRGFTPEGNIPFLDLFDINTG-----SK--ERIWESN---REKYFETAVALVFGQGEEDINLNQLKILT 443 (595)
Q Consensus 376 ~~--~~~l~~~~~g~~~~~~~~~l~~~d~~~g-----~~--~~l~~~~---~~~~~~~~~~~~~~~~~~~~s~d~~~l~~ 443 (595)
+. ...+ ..+|+++. +. +.|.... .+.....+. ...|+++|+.+++
T Consensus 463 ~~~~~~~v----------------~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~G~~~~~ 519 (567)
T 1qks_A 463 EAEISGSV----------------AVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV-------QGEFNKDGTEVWF 519 (567)
T ss_dssp SHHHHTCE----------------EEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE-------EEEECTTSSEEEE
T ss_pred CcccCceE----------------EEEECCcccccccCCCcEEeccccccccCCCCcceE-------eeeECCCCCEEEE
Confidence 00 1122 23455443 11 2221000 000001222 1468999999888
Q ss_pred EEe-cCCCcceEEEEeCCCCcee
Q 007620 444 SKE-SKTEITQYHILSWPLKKSS 465 (595)
Q Consensus 444 ~~~-s~~~p~~l~~~d~~~~~~~ 465 (595)
+.. .......|.++|.++.+++
T Consensus 520 s~~~~~~~~~~i~v~D~~t~~~~ 542 (567)
T 1qks_A 520 SVWNGKDQESALVVVDDKTLELK 542 (567)
T ss_dssp EEECCTTSCCEEEEEETTTTEEE
T ss_pred EeecCCCCCCcEEEEECCCceEE
Confidence 753 3335678999998776654
No 124
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.65 E-value=8.5e-06 Score=81.09 Aligned_cols=224 Identities=10% Similarity=0.005 Sum_probs=125.4
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~ 112 (595)
...|.|+||++.|+|+... ...|+++++++++.+.+.. .. .+..+.|++||+.++.. .
T Consensus 51 ~egp~~~~~~~~l~~~d~~---------~~~i~~~d~~~~~~~~~~~-~~-----~v~~i~~~~dg~l~v~~-~------ 108 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNIL---------ERELHELHLASGRKTVHAL-PF-----MGSALAKISDSKQLIAS-D------ 108 (326)
T ss_dssp EEEEEEETTTTEEEEEEGG---------GTEEEEEETTTTEEEEEEC-SS-----CEEEEEEEETTEEEEEE-T------
T ss_pred CcCCeEeCCCCEEEEEECC---------CCEEEEEECCCCcEEEEEC-CC-----cceEEEEeCCCeEEEEE-C------
Confidence 4579999999999887532 4689999999887665532 22 46688999999865543 0
Q ss_pred CCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeecCCC------CeeeeeEECCC
Q 007620 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP------AVYTAVEPSPD 185 (595)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~lt~~------~~~~~~~~SpD 185 (595)
..|++++. +|+.+.+... .....+.++||
T Consensus 109 --------------------------------------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 144 (326)
T 2ghs_A 109 --------------------------------------------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS 144 (326)
T ss_dssp --------------------------------------------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT
T ss_pred --------------------------------------------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCC
Confidence 12556666 4555444221 13457899999
Q ss_pred CCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecC
Q 007620 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (595)
Q Consensus 186 g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~ 265 (595)
|+ |++....... ......|++++ + ++.+.+.... .....+.|+|||+. +|+...
T Consensus 145 G~-l~v~~~~~~~------~~~~~~l~~~~-~-g~~~~~~~~~-------------~~~~~i~~s~dg~~-lyv~~~--- 198 (326)
T 2ghs_A 145 GA-LWIGTMGRKA------ETGAGSIYHVA-K-GKVTKLFADI-------------SIPNSICFSPDGTT-GYFVDT--- 198 (326)
T ss_dssp SC-EEEEEEETTC------CTTCEEEEEEE-T-TEEEEEEEEE-------------SSEEEEEECTTSCE-EEEEET---
T ss_pred CC-EEEEeCCCcC------CCCceEEEEEe-C-CcEEEeeCCC-------------cccCCeEEcCCCCE-EEEEEC---
Confidence 98 4454432110 00134788888 4 5544442110 01235789999873 655421
Q ss_pred CCcccccCCcceEEeccCCCCCCC-Cc---eeccc---cCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCc
Q 007620 266 GDANVEVSPRDIIYTQPAEPAEGE-KP---EILHK---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (595)
Q Consensus 266 ~~~~~~~~~~~~~~~~d~~~~~g~-~~---~~l~~---~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~ 338 (595)
....+++++.++ .+| +. +.+.. ..+....+.+.++|..++... ....|+++|+++ ...
T Consensus 199 --------~~~~I~~~d~~~-~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~----~~~~v~~~d~~g--~~~ 263 (326)
T 2ghs_A 199 --------KVNRLMRVPLDA-RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARW----GEGAVDRYDTDG--NHI 263 (326)
T ss_dssp --------TTCEEEEEEBCT-TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEE----TTTEEEEECTTC--CEE
T ss_pred --------CCCEEEEEEccc-ccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEe----CCCEEEEECCCC--CEE
Confidence 123566666410 123 21 12211 122334567788887655432 123799999854 222
Q ss_pred EEEe--ecccccccCCCCCCCeeeC-CCCCEEEEEee
Q 007620 339 RVLF--DRVFENVYSDPGSPMMTRT-STGTNVIAKIK 372 (595)
Q Consensus 339 ~~l~--~~~~~~~~~~~~~~~~~~~-~dg~~l~~~~~ 372 (595)
+.+. ...+.. +.++ ++++.||+...
T Consensus 264 ~~i~~~~~~~~~---------~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 264 ARYEVPGKQTTC---------PAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEECSCSBEEE---------EEEESTTSCEEEEEEB
T ss_pred EEEECCCCCcEE---------EEEecCCCCEEEEEec
Confidence 2221 111222 6676 78888877654
No 125
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.64 E-value=3.4e-05 Score=78.47 Aligned_cols=212 Identities=13% Similarity=0.116 Sum_probs=112.4
Q ss_pred CCceeeecCCCCCcccceEEcc-CCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCC---------cccccc
Q 007620 19 GPEKEVHGYPDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD---------ICLNAV 88 (595)
Q Consensus 19 g~~~~lt~~~~~~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~---------~~~~~~ 88 (595)
++.+.+.. .....+....||| ||+.||.... ...|.++++.+++......... ......
T Consensus 33 ~~~~~~~~-~h~~~v~~~~~s~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 33 NKDRDVER-IHGGGINTLDIEPVEGRYMLSGGS----------DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp CTTEEECC-CCSSCEEEEEECTTTCCEEEEEET----------TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred Ccceeeee-ccCCcEEEEEEecCCCCEEEEEcC----------CCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 34444432 2333688999999 9998877653 2456677887765433321000 001124
Q ss_pred ccceEEec-CCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CC
Q 007620 89 FGSFVWVN-NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG 166 (595)
Q Consensus 89 ~~~~~Wsp-dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g 166 (595)
+..+.|+| +++.|+.... ...|.++++ ++
T Consensus 102 v~~~~~~~~~~~~l~s~~~-------------------------------------------------d~~i~iwd~~~~ 132 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSF-------------------------------------------------DKTLKVWDTNTL 132 (408)
T ss_dssp EEEEEECTTCTTCEEEEET-------------------------------------------------TSEEEEEETTTT
T ss_pred EEEEEEccCCCcEEEEEeC-------------------------------------------------CCeEEEeeCCCC
Confidence 67889999 5555555311 123555566 33
Q ss_pred Cee-ecCCCCeeeeeEECCCC---CeEEEEEcccCccccccCcccceeEEEEcCCCce-EEEeccCCCCccCCccccccc
Q 007620 167 TAK-DFGTPAVYTAVEPSPDQ---KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVR 241 (595)
Q Consensus 167 ~~~-~lt~~~~~~~~~~SpDg---~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~l~~~~~~~~~~~~~~~~~ 241 (595)
+.. .+........+.|+|.+ ..|+.... ...+.+||+.++. ...+....
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~d~~~~~~~~~~~~~~------------- 186 (408)
T 4a11_B 133 QTADVFNFEETVYSHHMSPVSTKHCLVAVGTR-------------GPKVQLCDLKSGSCSHILQGHR------------- 186 (408)
T ss_dssp EEEEEEECSSCEEEEEECSSCSSCCEEEEEES-------------SSSEEEEESSSSCCCEEECCCC-------------
T ss_pred ccceeccCCCceeeeEeecCCCCCcEEEEEcC-------------CCeEEEEeCCCcceeeeecCCC-------------
Confidence 322 22223334567777754 46665543 2368899987554 33332211
Q ss_pred cCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCC-Cceec---------------cccCcccccee
Q 007620 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-KPEIL---------------HKLDLRFRSVS 305 (595)
Q Consensus 242 ~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~-~~~~l---------------~~~~~~~~~~~ 305 (595)
.....+.|+|+++..++.. .. ...+.++++ ..+. ....+ ......+..+.
T Consensus 187 ~~v~~~~~~~~~~~ll~~~-~~-----------dg~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATA-SA-----------DSRVKLWDV--RRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp SCEEEEEECSSCTTEEEEE-ET-----------TSCEEEEET--TCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred CcEEEEEECCCCCcEEEEE-cC-----------CCcEEEEEC--CCCCcccccccccccccceeeccccccccCceeEEE
Confidence 1134578999987423222 11 223455554 1110 11111 12234466789
Q ss_pred ecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 306 WCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 306 wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
|+||+..++... .++ .|.++|+.++
T Consensus 253 ~~~~~~~l~~~~--~dg--~i~vwd~~~~ 277 (408)
T 4a11_B 253 FTSDGLHLLTVG--TDN--RMRLWNSSNG 277 (408)
T ss_dssp ECTTSSEEEEEE--TTS--CEEEEETTTC
T ss_pred EcCCCCEEEEec--CCC--eEEEEECCCC
Confidence 999998877654 223 5777788774
No 126
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.64 E-value=1.6e-05 Score=78.10 Aligned_cols=216 Identities=12% Similarity=0.124 Sum_probs=122.2
Q ss_pred eeEEEecCCCCCCCCc-eeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 6 GIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~-~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.|.|+|+. .++. ..+.. ....+....|+|+|+.|+.... ...|.++|+.+++.........
T Consensus 88 ~i~vwd~~----~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~-- 149 (312)
T 4ery_A 88 TLKIWDVS----SGKCLKTLKG--HSNYVFCCNFNPQSNLIVSGSF----------DESVRIWDVKTGKCLKTLPAHS-- 149 (312)
T ss_dssp EEEEEETT----TCCEEEEEEC--CSSCEEEEEECSSSSEEEEEET----------TSCEEEEETTTCCEEEEECCCS--
T ss_pred EEEEEECC----CCcEEEEEcC--CCCCEEEEEEcCCCCEEEEEeC----------CCcEEEEECCCCEEEEEecCCC--
Confidence 47788887 4443 34442 2235778899999998876542 2457777998877543322211
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
..+..+.|+|+++.|+.... ...|.++|+
T Consensus 150 --~~v~~~~~~~~~~~l~~~~~-------------------------------------------------d~~i~~wd~ 178 (312)
T 4ery_A 150 --DPVSAVHFNRDGSLIVSSSY-------------------------------------------------DGLCRIWDT 178 (312)
T ss_dssp --SCEEEEEECTTSSEEEEEET-------------------------------------------------TSCEEEEET
T ss_pred --CcEEEEEEcCCCCEEEEEeC-------------------------------------------------CCcEEEEEC
Confidence 14678999999998776521 123445555
Q ss_pred -CCC-eeecCC--CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEE-EeccCCCCccCCccccc
Q 007620 165 -DGT-AKDFGT--PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNS 239 (595)
Q Consensus 165 -~g~-~~~lt~--~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~l~~~~~~~~~~~~~~~ 239 (595)
+++ ...+.. ......++|+|+|++|+..... ..+.+||+.+++.. .+......
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~--------- 236 (312)
T 4ery_A 179 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-------------NTLKLWDYSKGKCLKTYTGHKNE--------- 236 (312)
T ss_dssp TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT-------------TEEEEEETTTTEEEEEECSSCCS---------
T ss_pred CCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC-------------CeEEEEECCCCcEEEEEEecCCc---------
Confidence 343 223322 1234578999999999877642 37889998866543 33221100
Q ss_pred cccCCCCceee-cCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEE
Q 007620 240 VREGMRSISWR-ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNET 317 (595)
Q Consensus 240 ~~~~~~~~~ws-pdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~ 317 (595)
.......++ +++. .|+.. .....+.++++ ..++.. .+......+..+.|+|++..++...
T Consensus 237 --~~~~~~~~~~~~~~-~l~sg------------~~dg~i~vwd~---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 237 --KYCIFANFSVTGGK-WIVSG------------SEDNLVYIWNL---QTKEIVQKLQGHTDVVISTACHPTENIIASAA 298 (312)
T ss_dssp --SSCCCEEEECSSSC-EEEEC------------CTTSCEEEEET---TTCCEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred --eEEEEEEEEeCCCc-EEEEE------------CCCCEEEEEEC---CCchhhhhhhccCCcEEEEeecCcCCceEEEE
Confidence 000122333 3333 12111 12345777786 333332 3333444567889999998877654
Q ss_pred eecccceEEEEEe
Q 007620 318 WYKTSQTRTWLVC 330 (595)
Q Consensus 318 ~~~~~~~~L~~~d 330 (595)
...++..+||..|
T Consensus 299 ~~~d~~i~~W~~d 311 (312)
T 4ery_A 299 LENDKTIKLWKSD 311 (312)
T ss_dssp CTTTCCEEEEECC
T ss_pred ccCCccEEEecCC
Confidence 3234555666543
No 127
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.64 E-value=1.5e-05 Score=82.21 Aligned_cols=249 Identities=14% Similarity=0.130 Sum_probs=136.5
Q ss_pred eeEEEecCCCCCCCCceeeecCCC-CCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~-~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.|+|+|+. +|+..++..+.. ...+...+|||||++||..+. + ..|.++++.+++..+......
T Consensus 126 tV~lWd~~----tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~--------D--g~v~iWd~~~~~~~~~~~~h~-- 189 (420)
T 4gga_A 126 SVYLWSAS----SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS--------S--AEVQLWDVQQQKRLRNMTSHS-- 189 (420)
T ss_dssp EEEEEETT----TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET--------T--SCEEEEETTTTEEEEEECCCS--
T ss_pred EEEEEECC----CCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC--------C--CeEEEEEcCCCcEEEEEeCCC--
Confidence 58899998 787776654433 235889999999999876543 2 446666888887544332211
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
..+..+.| +++.|+....+ ..+.+.+.
T Consensus 190 --~~v~~~s~--~~~~l~sgs~d-------------------------------------------------~~i~~~d~ 216 (420)
T 4gga_A 190 --ARVGSLSW--NSYILSSGSRS-------------------------------------------------GHIHHHDV 216 (420)
T ss_dssp --SCEEEEEE--ETTEEEEEETT-------------------------------------------------SEEEEEET
T ss_pred --CceEEEee--CCCEEEEEeCC-------------------------------------------------CceeEeee
Confidence 12334444 56665553211 11222332
Q ss_pred CC---CeeecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEE--eccCCCCccCCcccc
Q 007620 165 DG---TAKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE--LCDLPPAEDIPVCYN 238 (595)
Q Consensus 165 ~g---~~~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~--l~~~~~~~~~~~~~~ 238 (595)
.. ....+. .........|+|+|+.|+....+ ..+.+|+...++... +....
T Consensus 217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D-------------~~v~i~~~~~~~~~~~~~~~~~---------- 273 (420)
T 4gga_A 217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------NLVNVWPSAPGEGGWVPLQTFT---------- 273 (420)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESSCCSSCSCCSEEEC----------
T ss_pred cccceeeEEecccccceeeeeecCCCCeeeeeecc-------------ccceEEeeccccccceeeeeec----------
Confidence 11 111221 22344578999999998877643 257788876443111 10000
Q ss_pred ccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEe
Q 007620 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW 318 (595)
Q Consensus 239 ~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~ 318 (595)
........+.|+|++...++... . .....+.+||+ ..++...............|++++..++....
T Consensus 274 ~~~~~V~~~~~~p~~~~~la~~~--g--------s~D~~I~iwd~---~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg 340 (420)
T 4gga_A 274 QHQGAVKAVAWCPWQSNVLATGG--G--------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHG 340 (420)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEE--C--------TTTCEEEEEET---TTTEEEEEEECSSCEEEEEEETTTTEEEEEEC
T ss_pred ccCCceeeeeeCCCcccEEEEEe--e--------cCCCEEEEEeC---CccccceeeccccceeeeeecCCCCeEEEEEe
Confidence 00011235778888775443321 1 11235777786 33344333334445677889999988776543
Q ss_pred ecccceEEEEEeCCCCCCCcEEEeec--ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 319 YKTSQTRTWLVCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 319 ~~~~~~~L~~~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
..++ .|.++|+.+++ ....+..+ .+.. +.|+|||+.|+...
T Consensus 341 ~~d~--~I~iwd~~~~~-~v~~l~gH~~~V~~---------l~~spdg~~l~S~s 383 (420)
T 4gga_A 341 FAQN--QLVIWKYPTMA-KVAELKGHTSRVLS---------LTMSPDGATVASAA 383 (420)
T ss_dssp TTTC--CEEEEETTTCC-EEEEECCCSSCEEE---------EEECTTSSCEEEEE
T ss_pred cCCC--EEEEEECCCCc-EEEEEcCCCCCEEE---------EEEcCCCCEEEEEe
Confidence 3233 57777887731 22222222 2333 78999999876554
No 128
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.63 E-value=3.3e-06 Score=84.48 Aligned_cols=214 Identities=8% Similarity=0.038 Sum_probs=116.9
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccC---CCEEEEEEecccccccCCCceEEEEEECCCCc--eEeccc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETGE--AKPLFE 79 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPD---G~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~--~~~lt~ 79 (595)
..|.|+|+. +++...+..+.....+....|+|+ |+.|+.... ...|.++++.+++ ...+..
T Consensus 44 ~~v~iw~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~ 109 (357)
T 3i2n_A 44 GVIQLYEIQ----HGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF----------GGNLHIWNLEAPEMPVYSVKG 109 (357)
T ss_dssp EEEEEEEEC----SSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET----------TSCEEEECTTSCSSCSEEECC
T ss_pred cEEEEEeCC----CCcccceeeecccCcEEEEEEcCCCCCCceEEEecC----------CCeEEEEeCCCCCccEEEEEe
Confidence 458889998 666654443333346889999999 677766542 2457777888765 333332
Q ss_pred CCCccccccccce------EEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEE
Q 007620 80 SPDICLNAVFGSF------VWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY 153 (595)
Q Consensus 80 ~~~~~~~~~~~~~------~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 153 (595)
... .+..+ .|+|+++.|+....+
T Consensus 110 ~~~-----~v~~~~~~~~~~~s~~~~~l~~~~~d---------------------------------------------- 138 (357)
T 3i2n_A 110 HKE-----IINAIDGIGGLGIGEGAPEIVTGSRD---------------------------------------------- 138 (357)
T ss_dssp CSS-----CEEEEEEESGGGCC-CCCEEEEEETT----------------------------------------------
T ss_pred ccc-----ceEEEeeccccccCCCccEEEEEeCC----------------------------------------------
Confidence 222 34455 457889887765221
Q ss_pred eecceEEEEcC-CCC--eeecCC-----CCeeeee----EECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE
Q 007620 154 YTTAQLVLGSL-DGT--AKDFGT-----PAVYTAV----EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (595)
Q Consensus 154 ~~~~~l~~~d~-~g~--~~~lt~-----~~~~~~~----~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~ 221 (595)
..|.++|+ +++ ...+.. ......+ +|+|+++.|+..... ..+.+||+.+++.
T Consensus 139 ---~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 139 ---GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-------------GDIKLFDLRNMAL 202 (357)
T ss_dssp ---SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-------------SEEEEEETTTTEE
T ss_pred ---CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-------------CeEEEEECccCce
Confidence 12334444 221 222211 1122333 489999998877642 3789999987776
Q ss_pred EEeccCCCCccCCccccccccCCCCceeec---CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc-eecc--
Q 007620 222 RELCDLPPAEDIPVCYNSVREGMRSISWRA---DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILH-- 295 (595)
Q Consensus 222 ~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp---dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~-~~l~-- 295 (595)
....... .....+.|+| ++.. ++.. . ....+.++++ ..++. ..+.
T Consensus 203 ~~~~~~~-------------~~v~~~~~~~~~~~~~~-l~~~-~-----------~dg~i~i~d~---~~~~~~~~~~~~ 253 (357)
T 3i2n_A 203 RWETNIK-------------NGVCSLEFDRKDISMNK-LVAT-S-----------LEGKFHVFDM---RTQHPTKGFASV 253 (357)
T ss_dssp EEEEECS-------------SCEEEEEESCSSSSCCE-EEEE-E-----------STTEEEEEEE---EEEETTTEEEEE
T ss_pred eeecCCC-------------CceEEEEcCCCCCCCCE-EEEE-C-----------CCCeEEEEeC---cCCCcccceeee
Confidence 4443221 1134578888 7763 3222 1 1235566664 21121 1121
Q ss_pred ---ccCccccceeecCCCc-EEEEEEeecccceEEEEEe
Q 007620 296 ---KLDLRFRSVSWCDDSL-ALVNETWYKTSQTRTWLVC 330 (595)
Q Consensus 296 ---~~~~~~~~~~wspDg~-~l~~~~~~~~~~~~L~~~d 330 (595)
.....+..+.|+|++. .++... .++...||-+.
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~ 290 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAG--GAGGLHLWKYE 290 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEE--TTSEEEEEEEE
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEe--CCCcEEEeecC
Confidence 3345577899999998 455543 23434455443
No 129
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.63 E-value=2e-05 Score=78.03 Aligned_cols=227 Identities=11% Similarity=0.092 Sum_probs=122.4
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecc-cCCCccccccccceEEecCCcEEEEEecCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF-ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt-~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~ 110 (595)
.+....|+|||++|+-.+. ...|.++|+.+++..+.. .... .+..+.|+|+++.|+....+
T Consensus 67 ~v~~~~~s~dg~~l~s~s~----------D~~v~~wd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~s~D--- 128 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASW----------DKTLRLWDVATGETYQRFVGHKS-----DVMSVDIDKKASMIISGSRD--- 128 (319)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSCEEEEEETT---
T ss_pred cEEEEEECCCCCEEEEEeC----------CCEEEEEECCCCCeeEEEccCCC-----cEEEEEEcCCCCEEEEEeCC---
Confidence 4778899999998776542 245667799888754432 2222 46789999999987765321
Q ss_pred CCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCC-eeecC-CCCeeeeeEECCCC--
Q 007620 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFG-TPAVYTAVEPSPDQ-- 186 (595)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~lt-~~~~~~~~~~SpDg-- 186 (595)
..|.++++.+. ...+. .......+.|+|++
T Consensus 129 ----------------------------------------------~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 129 ----------------------------------------------KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp ----------------------------------------------SCEEEEETTSCEEEEECCCSSCEEEEEECCC---
T ss_pred ----------------------------------------------CeEEEEECCCCeEEEEeccCCcEEEEEEccCCCC
Confidence 12233344332 22222 22345567788753
Q ss_pred ----CeEEEEEcccCccccccCcccceeEEEEcCCCceEE-EeccCCCCccCCccccccccCCCCceeecCCCeeEEEEE
Q 007620 187 ----KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (595)
Q Consensus 187 ----~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~ 261 (595)
..|+.... ...+.+||+...... .+... ......+.|+|||+. |+..
T Consensus 163 ~~~~~~l~s~~~-------------d~~i~~wd~~~~~~~~~~~~h-------------~~~v~~~~~sp~g~~-l~s~- 214 (319)
T 3frx_A 163 DDDSVTIISAGN-------------DKMVKAWNLNQFQIEADFIGH-------------NSNINTLTASPDGTL-IASA- 214 (319)
T ss_dssp ---CCEEEEEET-------------TSCEEEEETTTTEEEEEECCC-------------CSCEEEEEECTTSSE-EEEE-
T ss_pred CCCccEEEEEeC-------------CCEEEEEECCcchhheeecCC-------------CCcEEEEEEcCCCCE-EEEE-
Confidence 35554432 236889998865543 22211 111345789999983 3222
Q ss_pred eecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEE
Q 007620 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (595)
Q Consensus 262 ~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l 341 (595)
.....+.+||+ ..++..........+..+.|+||+..++.... . .+.+++++.. .....
T Consensus 215 -----------~~dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~---~--~i~v~~~~~~--~~~~~ 273 (319)
T 3frx_A 215 -----------GKDGEIMLWNL---AAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA---T--GIKVFSLDPQ--YLVDD 273 (319)
T ss_dssp -----------ETTCEEEEEET---TTTEEEEEEECCSCEEEEEECSSSSEEEEEET---T--EEEEEEETTE--EEEEE
T ss_pred -----------eCCCeEEEEEC---CCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC---C--CcEEEEeCcC--eeeec
Confidence 12346777886 32233222223345678999999988766531 2 2444454441 11111
Q ss_pred eeccccc--ccCCCCCCCeeeCCCCCEEEEEe
Q 007620 342 FDRVFEN--VYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 342 ~~~~~~~--~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
....... ....+....+.|+|||+.|+...
T Consensus 274 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 274 LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp ECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred cCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 1111000 00000111278999999887654
No 130
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.63 E-value=4.4e-05 Score=81.73 Aligned_cols=272 Identities=12% Similarity=0.058 Sum_probs=134.1
Q ss_pred eeEEEecCCCCCCCC-ceeeecCCCCCcccceEEc----cCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccC
Q 007620 6 GIGIHRLLPDDSLGP-EKEVHGYPDGAKINFVSWS----PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~-~~~lt~~~~~~~~~~~~~S----PDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~ 80 (595)
.|.+.|+.. .+++ ..+| +.+.......+| |||++++.... ...+|.++|..+.+.......
T Consensus 219 ~V~viD~~~--~t~~~v~~i---~~G~~P~~ia~s~~~~pDGk~l~v~n~---------~~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 219 KVNMIDLWM--KEPTTVAEI---KIGSEARSIETSKMEGWEDKYAIAGAY---------WPPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp EEEEEETTS--SSCCEEEEE---ECCSEEEEEEECCSTTCTTTEEEEEEE---------ETTEEEEEETTTCCEEEEEEC
T ss_pred eEEEEECCC--CCCcEeEEE---ecCCCCceeEEccccCCCCCEEEEEEc---------cCCeEEEEECCCCcEEEEEec
Confidence 366777730 1222 2333 334456788999 79998766543 246788999988876554322
Q ss_pred CCcccc-------ccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEE
Q 007620 81 PDICLN-------AVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY 153 (595)
Q Consensus 81 ~~~~~~-------~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 153 (595)
.....+ ..+..+..|+++..+++...
T Consensus 285 ~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~----------------------------------------------- 317 (567)
T 1qks_A 285 RGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK----------------------------------------------- 317 (567)
T ss_dssp CEECTTTCCEESCCCEEEEEECSSSSEEEEEET-----------------------------------------------
T ss_pred cccccccccccCCCceEEEEEcCCCCEEEEEec-----------------------------------------------
Confidence 210000 01223444555544333210
Q ss_pred eecceEEEEcCCC-C---eeecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCC
Q 007620 154 YTTAQLVLGSLDG-T---AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP 229 (595)
Q Consensus 154 ~~~~~l~~~d~~g-~---~~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~ 229 (595)
...+|+++|... + ...+........+.|+|||++++++.... ..|.++|+.+++.......-
T Consensus 318 -~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~s------------n~V~ViD~~t~kl~~~i~vg- 383 (567)
T 1qks_A 318 -ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANAR------------NKLVVIDTKEGKLVAIEDTG- 383 (567)
T ss_dssp -TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGG------------TEEEEEETTTTEEEEEEECS-
T ss_pred -CCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCC------------CeEEEEECCCCcEEEEEecc-
Confidence 134677777632 2 22233334556789999999998886532 37899999877654332110
Q ss_pred CccCCccccccccCCCCcee-ecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCC--Ccee---ccccCccccc
Q 007620 230 AEDIPVCYNSVREGMRSISW-RADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE--KPEI---LHKLDLRFRS 303 (595)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~w-spdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~--~~~~---l~~~~~~~~~ 303 (595)
. ..|- . .+...| .|++. .++..... ..+.+.+++.++.... ..+. +.........
T Consensus 384 g-~~Ph------p-g~g~~~~~p~~g-~v~~t~~~----------g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~ 444 (567)
T 1qks_A 384 G-QTPH------P-GRGANFVHPTFG-PVWATSHM----------GDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLF 444 (567)
T ss_dssp S-SSBC------C-TTCEEEEETTTE-EEEEEEBS----------SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCC
T ss_pred C-cCCC------C-ccceeeECCCCC-cEEEeCCC----------CCCeEEEecCCCCCCccccCEEEEEEecCCCCCEE
Confidence 0 0110 0 123444 56644 24333111 1235666665210000 0121 2211122234
Q ss_pred eeecCCCcEEEEEEeecc---cceEEEEEeCCCC-----CCCcEEEeecccccccCCCCC--CCeeeCCCCCEEEEEee
Q 007620 304 VSWCDDSLALVNETWYKT---SQTRTWLVCPGSK-----DVAPRVLFDRVFENVYSDPGS--PMMTRTSTGTNVIAKIK 372 (595)
Q Consensus 304 ~~wspDg~~l~~~~~~~~---~~~~L~~~d~~~~-----~~~~~~l~~~~~~~~~~~~~~--~~~~~~~dg~~l~~~~~ 372 (595)
+..+||++.++.+..... ....|.++|+++. +...+.+.-..... ....+. .-+.+++||+.++++..
T Consensus 445 i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~G~~~~~s~~ 522 (567)
T 1qks_A 445 IKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAG-ITEGQPRVVQGEFNKDGTEVWFSVW 522 (567)
T ss_dssp EECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHT-CCSSCCEEEEEEECTTSSEEEEEEE
T ss_pred EEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccc-cCCCCcceEeeeECCCCCEEEEEee
Confidence 567899987665431111 1347888998763 11113331000000 000010 11788999999998854
No 131
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.62 E-value=1.4e-05 Score=88.27 Aligned_cols=217 Identities=13% Similarity=0.097 Sum_probs=121.3
Q ss_pred eeEEEecCCCCCC-CC-ceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEe-cccCCC
Q 007620 6 GIGIHRLLPDDSL-GP-EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPD 82 (595)
Q Consensus 6 ~~~~~~~~~~~~~-g~-~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~-lt~~~~ 82 (595)
.|.|+++...... +. .+.++.+. ..+...+|||||++|+-.+. ...|.++|+.+++..+ +.....
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~~~h~--~~v~~v~~s~~g~~l~sgs~----------Dg~v~vwd~~~~~~~~~~~~h~~ 473 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRLTGHS--HFVEDVVLSSDGQFALSGSW----------DGELRLWDLAAGVSTRRFVGHTK 473 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEEECCS--SCEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSS
T ss_pred cEEEEEccCCCcccccccceecCCC--CcEEEEEECCCCCEEEEEeC----------CCcEEEEECCCCcceeEEeCCCC
Confidence 3667787631111 11 23455433 35888999999998876542 2567777998886543 333232
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEE
Q 007620 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (595)
Q Consensus 83 ~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 162 (595)
.+..+.|+||++.|+....+ ..|.++
T Consensus 474 -----~v~~~~~s~~~~~l~s~s~D-------------------------------------------------~~i~iw 499 (694)
T 3dm0_A 474 -----DVLSVAFSLDNRQIVSASRD-------------------------------------------------RTIKLW 499 (694)
T ss_dssp -----CEEEEEECTTSSCEEEEETT-------------------------------------------------SCEEEE
T ss_pred -----CEEEEEEeCCCCEEEEEeCC-------------------------------------------------CEEEEE
Confidence 56789999999988765321 112223
Q ss_pred cCCCC-eeecC-----CCCeeeeeEECCCCC-eEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCC
Q 007620 163 SLDGT-AKDFG-----TPAVYTAVEPSPDQK-YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIP 234 (595)
Q Consensus 163 d~~g~-~~~lt-----~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~ 234 (595)
|+.+. ...+. ....+..++|+|++. .++++... ...|.+||+.+++. ..+....
T Consensus 500 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~------------d~~v~vwd~~~~~~~~~~~~h~------ 561 (694)
T 3dm0_A 500 NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW------------DKTVKVWNLSNCKLRSTLAGHT------ 561 (694)
T ss_dssp CTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET------------TSCEEEEETTTCCEEEEECCCS------
T ss_pred ECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC------------CCeEEEEECCCCcEEEEEcCCC------
Confidence 33221 11111 122456789999974 23333322 23688999886544 3332211
Q ss_pred ccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEE
Q 007620 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALV 314 (595)
Q Consensus 235 ~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~ 314 (595)
.....+.|+|||+. |+.. .....+.+||+ ..++..........+..+.|+|++..++
T Consensus 562 -------~~v~~v~~spdg~~-l~sg------------~~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 562 -------GYVSTVAVSPDGSL-CASG------------GKDGVVLLWDL---AEGKKLYSLEANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp -------SCEEEEEECTTSSE-EEEE------------ETTSBCEEEET---TTTEEEECCBCSSCEEEEEECSSSSEEE
T ss_pred -------CCEEEEEEeCCCCE-EEEE------------eCCCeEEEEEC---CCCceEEEecCCCcEEEEEEcCCCcEEE
Confidence 11346889999873 3221 11235666775 3223222222334567789999998776
Q ss_pred EEEeecccceEEEEEeCCCC
Q 007620 315 NETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 315 ~~~~~~~~~~~L~~~d~~~~ 334 (595)
... .. .|.++|+.++
T Consensus 619 ~~~---~~--~i~iwd~~~~ 633 (694)
T 3dm0_A 619 AAT---EH--GIKIWDLESK 633 (694)
T ss_dssp EEE---TT--EEEEEETTTT
T ss_pred EEc---CC--CEEEEECCCC
Confidence 543 12 4777788763
No 132
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.62 E-value=1.1e-05 Score=83.83 Aligned_cols=256 Identities=14% Similarity=0.112 Sum_probs=130.6
Q ss_pred eeEEEecCCCCCCCCceeeecC-CCCCcccceEEcc-CCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGY-PDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~-~~~~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~ 83 (595)
.|.|+|+. +++...+..+ .....+...+||| ||++|+-.+ . ++ .|.++|+.++..+.+......
T Consensus 143 ~i~lWd~~----~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-~-------D~--~v~iwd~~~~~~~~~~~~~~~ 208 (435)
T 4e54_B 143 DIMLWNFG----IKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-M-------EG--TTRLQDFKGNILRVFASSDTI 208 (435)
T ss_dssp CEEEECSS----CCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC-S-------SS--CEEEEETTSCEEEEEECCSSC
T ss_pred EEEEEECC----CCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe-C-------CC--EEEEeeccCCceeEEeccCCC
Confidence 47888887 4443333222 2334688999999 677665433 2 33 455569887765555432211
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEc
Q 007620 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 163 (595)
...+..+.|+||++.|+.... ...|.++|
T Consensus 209 --~~~~~~~~~~~~~~~l~~g~~-------------------------------------------------dg~i~~wd 237 (435)
T 4e54_B 209 --NIWFCSLDVSASSRMVVTGDN-------------------------------------------------VGNVILLN 237 (435)
T ss_dssp --SCCCCCEEEETTTTEEEEECS-------------------------------------------------SSBEEEEE
T ss_pred --CccEEEEEECCCCCEEEEEeC-------------------------------------------------CCcEeeec
Confidence 113457899999998776411 12355566
Q ss_pred CCC-CeeecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCcccccc
Q 007620 164 LDG-TAKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSV 240 (595)
Q Consensus 164 ~~g-~~~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~ 240 (595)
+++ ....+. ....+..++|+|+++.++++...+ ..+.+||+...+. ..+... .++
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d------------~~v~iwd~~~~~~~~~~~~~----------~~h 295 (435)
T 4e54_B 238 MDGKELWNLRMHKKKVTHVALNPCCDWFLATASVD------------QTVKIWDLRQVRGKASFLYS----------LPH 295 (435)
T ss_dssp SSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT------------SBCCEEETTTCCSSSCCSBC----------CBC
T ss_pred cCcceeEEEecccceEEeeeecCCCceEEEEecCc------------ceeeEEecccccccceEEEe----------eec
Confidence 654 333332 223456899999998777665432 2567888764332 111110 011
Q ss_pred ccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccC------ccccceeecCCCcEEE
Q 007620 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD------LRFRSVSWCDDSLALV 314 (595)
Q Consensus 241 ~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~------~~~~~~~wspDg~~l~ 314 (595)
......+.|+|||.. |+.. .....+.+|++ .++.....+.... .......|+|++..++
T Consensus 296 ~~~v~~~~~spdg~~-l~s~------------~~D~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (435)
T 4e54_B 296 RHPVNAACFSPDGAR-LLTT------------DQKSEIRVYSA--SQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIV 360 (435)
T ss_dssp SSCEEECCBCTTSSE-EEEE------------ESSSCEEEEES--SSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEE
T ss_pred cccccceeECCCCCe-eEEE------------cCCCEEEEEEC--CCCccceEEecccccccccceeEEEEEcCCCCEEE
Confidence 112345789999983 3322 11235666665 2221222222111 1123456888776554
Q ss_pred EEEeec--------ccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEE
Q 007620 315 NETWYK--------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIA 369 (595)
Q Consensus 315 ~~~~~~--------~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 369 (595)
.....+ .....|.++|..+++ ....+.......+. ....|+|+|+.|+.
T Consensus 361 ~~~~~d~~~~~~~~~~~~~i~iwd~~~g~-~~~~l~~~~~~~v~-----s~~~fspdg~~las 417 (435)
T 4e54_B 361 VGRYPDPNFKSCTPYELRTIDVFDGNSGK-MMCQLYDPESSGIS-----SLNEFNPMGDTLAS 417 (435)
T ss_dssp EECCCCTTSCCSSTTCCCCEEEECSSSCC-EEEEECCSSCCCCC-----CEEEECTTSSCEEE
T ss_pred EEEcCCCCeEEEEecCCCEEEEEECCCCc-EEEEEeCCCCCcEE-----EEEEECCCCCEEEE
Confidence 432111 011246677877631 11222222111100 11368999997654
No 133
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.61 E-value=1.6e-05 Score=82.83 Aligned_cols=62 Identities=13% Similarity=0.181 Sum_probs=39.4
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECC--CCceEecccCCCccccccccceEEecCCcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~--~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
.+...+|||||++|+++... ++. |.++++. +++..+..... .....+..+.|+|||+.|+..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~-------dg~--v~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~ 167 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADS-------DKS--LLVFDVDKTSKNVLKLRKRF--CFSKRPNAISIAEDDTTVIIA 167 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGG-------GTE--EEEEEECSSSSSCEEEEEEE--ECSSCEEEEEECTTSSEEEEE
T ss_pred ceEEEEEcCCCCEEEEEECC-------CCe--EEEEECcCCCCceeeeeecc--cCCCCceEEEEcCCCCEEEEE
Confidence 37788999999998776643 334 4444555 66544332110 001146789999999988775
No 134
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.61 E-value=1.1e-05 Score=82.58 Aligned_cols=149 Identities=13% Similarity=0.050 Sum_probs=83.0
Q ss_pred CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEe--ccCCCCccCCccccccccCCCCceeec
Q 007620 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-REL--CDLPPAEDIPVCYNSVREGMRSISWRA 251 (595)
Q Consensus 175 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l--~~~~~~~~~~~~~~~~~~~~~~~~wsp 251 (595)
..+..++|+|+|+.++++.... ..+.+||+.+++. ..+ .... .....+.|+|
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~-------------~~v~~~~~~~ 186 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCD------------NVILVWDVGTGAAVLTLGPDVHP-------------DTIYSVDWSR 186 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETT------------SCEEEEETTTTEEEEEECTTTCC-------------SCEEEEEECT
T ss_pred CeEEEEEECcCCCCEEEEEcCC------------CEEEEEECCCCCccEEEecCCCC-------------CceEEEEECC
Confidence 3456899999996555554322 3689999886654 333 1111 1134688999
Q ss_pred CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-ec-cccCc-cccceeecCCCcEEEEEEeecccceEEEE
Q 007620 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-IL-HKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (595)
Q Consensus 252 dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l-~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~L~~ 328 (595)
|++. |+.. .....+.++|+ ..++.. .+ ..... ....+.|+||+..++.... ......|.+
T Consensus 187 ~~~~-l~~~------------~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-~~~d~~i~i 249 (402)
T 2aq5_A 187 DGAL-ICTS------------CRDKRVRVIEP---RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS-RMSERQVAL 249 (402)
T ss_dssp TSSC-EEEE------------ETTSEEEEEET---TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEEC-TTCCEEEEE
T ss_pred CCCE-EEEE------------ecCCcEEEEeC---CCCceeeeeccCCCCCcceEEEEcCCCcEEEEecc-CCCCceEEE
Confidence 9874 3332 12346777786 323332 23 12222 3677899999987665421 112237888
Q ss_pred EeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 329 VCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 329 ~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
+|+.+.+ .+..+....... +...+.|+++|+.+++..
T Consensus 250 wd~~~~~-~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 250 WDTKHLE-EPLSLQELDTSS-----GVLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp EETTBCS-SCSEEEECCCCS-----SCEEEEEETTTTEEEEEE
T ss_pred EcCcccc-CCceEEeccCCC-----ceeEEEEcCCCCEEEEEE
Confidence 8887742 222222111100 111278999999887664
No 135
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.61 E-value=2.7e-05 Score=78.41 Aligned_cols=239 Identities=10% Similarity=0.086 Sum_probs=128.4
Q ss_pred eEEEecCCCCCCCCc-eeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc-------eEecc
Q 007620 7 IGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------AKPLF 78 (595)
Q Consensus 7 ~~~~~~~~~~~~g~~-~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~-------~~~lt 78 (595)
|.|+|+. +++. ..++ ... ..+....|||||+.||.... + ..+.++++..+. ...+.
T Consensus 88 v~vWd~~----~~~~~~~~~-~~~-~~v~~~~~sp~g~~lasg~~--------d--~~i~v~~~~~~~~~~~~~~~~~~~ 151 (354)
T 2pbi_B 88 VIVWDSF----TTNKEHAVT-MPC-TWVMACAYAPSGCAIACGGL--------D--NKCSVYPLTFDKNENMAAKKKSVA 151 (354)
T ss_dssp EEEEETT----TCCEEEEEE-CSS-SCCCEEEECTTSSEEEEEST--------T--SEEEEEECCCCTTCCSGGGCEEEE
T ss_pred EEEEECC----CCCcceEEe-cCC-CCEEEEEECCCCCEEEEeeC--------C--CCEEEEEEeccccccccccceeee
Confidence 5666766 3433 3343 232 35788999999998876542 2 344444554321 12221
Q ss_pred cCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecce
Q 007620 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (595)
Q Consensus 79 ~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (595)
.... .+..+.|+|+++.|+....+ ..
T Consensus 152 ~h~~-----~v~~~~~~~~~~~l~t~s~D-------------------------------------------------~~ 177 (354)
T 2pbi_B 152 MHTN-----YLSACSFTNSDMQILTASGD-------------------------------------------------GT 177 (354)
T ss_dssp ECSS-----CEEEEEECSSSSEEEEEETT-------------------------------------------------SE
T ss_pred ccCC-----cEEEEEEeCCCCEEEEEeCC-------------------------------------------------Cc
Confidence 1111 45688999999987764211 23
Q ss_pred EEEEcC-CCCe-eecC-CCCeeeeeEECC--CCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCcc
Q 007620 159 LVLGSL-DGTA-KDFG-TPAVYTAVEPSP--DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAED 232 (595)
Q Consensus 159 l~~~d~-~g~~-~~lt-~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~ 232 (595)
|.++|+ +++. ..+. .......++|+| +|+.|+....+ ..+.+||+.+++. ..+....
T Consensus 178 v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D-------------g~v~~wd~~~~~~~~~~~~h~---- 240 (354)
T 2pbi_B 178 CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD-------------KKAMVWDMRSGQCVQAFETHE---- 240 (354)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT-------------SCEEEEETTTCCEEEEECCCS----
T ss_pred EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC-------------CeEEEEECCCCcEEEEecCCC----
Confidence 444555 4432 2232 222344566666 56777766532 3688999876543 3332211
Q ss_pred CCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecccc---CccccceeecCC
Q 007620 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL---DLRFRSVSWCDD 309 (595)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~---~~~~~~~~wspD 309 (595)
.....+.|+|++.. ++.. .....+.++|+ ..+....+... ......+.|+|+
T Consensus 241 ---------~~v~~v~~~p~~~~-l~s~------------s~D~~v~lwd~---~~~~~~~~~~~~~~~~~~~~~~~s~~ 295 (354)
T 2pbi_B 241 ---------SDVNSVRYYPSGDA-FASG------------SDDATCRLYDL---RADREVAIYSKESIIFGASSVDFSLS 295 (354)
T ss_dssp ---------SCEEEEEECTTSSE-EEEE------------ETTSCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred ---------CCeEEEEEeCCCCE-EEEE------------eCCCeEEEEEC---CCCcEEEEEcCCCcccceeEEEEeCC
Confidence 11345789999873 3222 11235666675 32222222211 123457889999
Q ss_pred CcEEEEEEeecccceEEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 310 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 310 g~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
|..++... .++ .|.++|+.+++ ....+.. ..+.. +.|+|||+.|+...
T Consensus 296 g~~l~~g~--~d~--~i~vwd~~~~~-~~~~l~~h~~~v~~---------l~~spdg~~l~sgs 345 (354)
T 2pbi_B 296 GRLLFAGY--NDY--TINVWDVLKGS-RVSILFGHENRVST---------LRVSPDGTAFCSGS 345 (354)
T ss_dssp SSEEEEEE--TTS--CEEEEETTTCS-EEEEECCCSSCEEE---------EEECTTSSCEEEEE
T ss_pred CCEEEEEE--CCC--cEEEEECCCCc-eEEEEECCCCcEEE---------EEECCCCCEEEEEc
Confidence 99877653 223 46667876631 2222322 22332 78999999876554
No 136
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.60 E-value=4.9e-06 Score=84.19 Aligned_cols=95 Identities=9% Similarity=-0.045 Sum_probs=45.8
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEE-EEEEecccccccCC----CceEEEEEECC-CCceE-ecc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRI-AFSVRVDEEDNVSS----CKLRVWIADAE-TGEAK-PLF 78 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~l-af~~~~~~~~~~~~----~~~~L~v~d~~-~g~~~-~lt 78 (595)
.|.+.++.. +|+..++...+.........|||||++| +|+...+.-..... ....+.+++++ .|+.. .+.
T Consensus 61 ~v~~~~~~~---~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~ 137 (365)
T 1jof_A 61 KWSSFAVKS---PTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQ 137 (365)
T ss_dssp EEEEEEEEE---TTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEE
T ss_pred eEEEEEECC---CCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEe
Confidence 466777752 4555544322211135668999999974 45542000000000 12334455554 35432 232
Q ss_pred cCCCccccccccceEEecCCcEEEEE
Q 007620 79 ESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 79 ~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
.... ........+.|+|||+.|++.
T Consensus 138 ~~~~-~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 138 NYEY-QENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp EEEC-CTTCCEEEEEECTTSSEEEEE
T ss_pred eEEe-CCCCcceEEEECCCCCEEEEE
Confidence 1000 000135688999999987664
No 137
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.58 E-value=0.0001 Score=72.86 Aligned_cols=115 Identities=12% Similarity=0.078 Sum_probs=63.4
Q ss_pred eeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCee
Q 007620 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (595)
Q Consensus 177 ~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~ 256 (595)
.....++++++.|+....+ ..+.+||+.+.....+..... ........|++++...
T Consensus 131 ~~~~~~~~~~~~l~s~s~d-------------~~~~~~d~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRD-------------KTIKLWNTLGVCKYTVQDESH-----------SEWVSCVRFSPNSSNP 186 (340)
T ss_dssp EEEEEECTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSSSC-----------SSCEEEEEECSCSSSC
T ss_pred eeEEEEeecCccceeecCC-------------CeEEEEEeCCCceEEEEeccc-----------cCcccceEEccCCCCc
Confidence 4467889999988776532 257788887655443321110 0111235566665443
Q ss_pred EEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 257 l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
+... . .....+.+++. ..++.. .+......+..+.|+||+..|+... .++ .|.++|+.+
T Consensus 187 ~~~s-~----------~~d~~i~i~d~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s--~Dg--~i~iwd~~~ 246 (340)
T 4aow_A 187 IIVS-C----------GWDKLVKVWNL---ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG--KDG--QAMLWDLNE 246 (340)
T ss_dssp EEEE-E----------ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTC--EEEEEETTT
T ss_pred EEEE-E----------cCCCEEEEEEC---CCCceeeEecCCCCcEEEEEECCCCCEEEEEe--CCC--eEEEEEecc
Confidence 3222 1 11234566665 322322 2333445677889999999877654 223 566778876
No 138
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.55 E-value=1e-05 Score=79.52 Aligned_cols=246 Identities=11% Similarity=0.013 Sum_probs=130.4
Q ss_pred CCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecC
Q 007620 18 LGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN 97 (595)
Q Consensus 18 ~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspd 97 (595)
+.+.++|.. .......|.|+|||+.|+|+.. ....|++++. +|+.+.+..... ....+.|++|
T Consensus 34 ~~~~~~l~~--~~~~~egp~~~~~g~~l~~~d~---------~~~~i~~~~~-~g~~~~~~~~~~-----~~~gl~~d~d 96 (305)
T 3dr2_A 34 DARLLTLYD--QATWSEGPAWWEAQRTLVWSDL---------VGRRVLGWRE-DGTVDVLLDATA-----FTNGNAVDAQ 96 (305)
T ss_dssp TCCCEEEEC--CCSSEEEEEEEGGGTEEEEEET---------TTTEEEEEET-TSCEEEEEESCS-----CEEEEEECTT
T ss_pred CCceEEEec--CCcCccCCeEeCCCCEEEEEEC---------CCCEEEEEeC-CCCEEEEeCCCC-----ccceeeECCC
Confidence 455666763 3334678999999999988753 2467888898 466555543332 3467899999
Q ss_pred CcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCCeeecCCC---
Q 007620 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTP--- 174 (595)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~lt~~--- 174 (595)
|++++... + ...|++++.+|+.+.+...
T Consensus 97 G~l~v~~~------------------------~-------------------------~~~v~~~~~~g~~~~~~~~~~~ 127 (305)
T 3dr2_A 97 QRLVHCEH------------------------G-------------------------RRAITRSDADGQAHLLVGRYAG 127 (305)
T ss_dssp SCEEEEET------------------------T-------------------------TTEEEEECTTSCEEEEECEETT
T ss_pred CCEEEEEC------------------------C-------------------------CCEEEEECCCCCEEEEEeccCC
Confidence 99554431 0 1234444544444333211
Q ss_pred ---CeeeeeEECCCCCeEEEEEc----ccCccc-cccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCC
Q 007620 175 ---AVYTAVEPSPDQKYVLITSM----HRPYSY-KVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRS 246 (595)
Q Consensus 175 ---~~~~~~~~SpDg~~l~~~~~----~~~~~~-~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 246 (595)
.....+.++|||+ |+++.. ...+.. ..........|+++|.++++.+.+... .....
T Consensus 128 ~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~--------------~~p~g 192 (305)
T 3dr2_A 128 KRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADL--------------DHPNG 192 (305)
T ss_dssp EECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEE--------------SSEEE
T ss_pred CccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecC--------------CCCcc
Confidence 1124688999997 555411 000000 000000134799999977766555311 01235
Q ss_pred ceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce---eccc-cCccccceeecCCCcEEEEEEeeccc
Q 007620 247 ISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE---ILHK-LDLRFRSVSWCDDSLALVNETWYKTS 322 (595)
Q Consensus 247 ~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~---~l~~-~~~~~~~~~wspDg~~l~~~~~~~~~ 322 (595)
+.|+|||+. ||+...... ......+++++. .++... .+.. ..+....+.+.++|..++..
T Consensus 193 l~~spdg~~-lyv~~~~~~------~~~~~~i~~~~~---~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~------ 256 (305)
T 3dr2_A 193 LAFSPDEQT-LYVSQTPEQ------GHGSVEITAFAW---RDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS------ 256 (305)
T ss_dssp EEECTTSSE-EEEEECCC---------CCCEEEEEEE---ETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC------
T ss_pred eEEcCCCCE-EEEEecCCc------CCCCCEEEEEEe---cCCCccCCeEEEECCCCCCCeEEECCCCCEEEec------
Confidence 789999973 655421100 000135666564 221111 1111 12233456778888744432
Q ss_pred ceEEEEEeCCCCCCCcEEEe-ecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 323 QTRTWLVCPGSKDVAPRVLF-DRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 323 ~~~L~~~d~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
...|+++++++ .....+. .....+ +.++++++.|++..
T Consensus 257 ~~gv~~~~~~g--~~~~~~~~~~~~~~---------~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 257 GTGVCVFDSDG--QLLGHIPTPGTASN---------CTFDQAQQRLFITG 295 (305)
T ss_dssp SSEEEEECTTS--CEEEEEECSSCCCE---------EEECTTSCEEEEEE
T ss_pred CCcEEEECCCC--CEEEEEECCCceeE---------EEEeCCCCEEEEEc
Confidence 12599999876 2222221 111222 67788888888776
No 139
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.55 E-value=1.1e-06 Score=89.09 Aligned_cols=203 Identities=9% Similarity=0.142 Sum_probs=110.2
Q ss_pred eeEEEecCCCCCCCCceeeecCC-CCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc----eEecccC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYP-DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFES 80 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~-~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~----~~~lt~~ 80 (595)
.|.|+|+. ++..+.+..+. ....+....|||||++|+..+. + ..|.++++.+++ ...+...
T Consensus 34 ~i~iw~~~----~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~--------d--~~v~vwd~~~~~~~~~~~~~~~~ 99 (377)
T 3dwl_C 34 QVELYEQD----GNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ--------D--RNAYVYEKRPDGTWKQTLVLLRL 99 (377)
T ss_dssp CBCEEEEE----TTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET--------T--SSEEEC------CCCCEEECCCC
T ss_pred EEEEEEcc----CCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC--------C--CeEEEEEcCCCCceeeeeEeccc
Confidence 47788887 44222222222 2235788999999998877653 2 346666777765 3333322
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEE
Q 007620 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (595)
Q Consensus 81 ~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (595)
.. .+..+.|+||++.|+....+ ..|.
T Consensus 100 ~~-----~v~~~~~~~~~~~l~~~~~d-------------------------------------------------~~i~ 125 (377)
T 3dwl_C 100 NR-----AATFVRWSPNEDKFAVGSGA-------------------------------------------------RVIS 125 (377)
T ss_dssp SS-----CEEEEECCTTSSCCEEEESS-------------------------------------------------SCEE
T ss_pred CC-----ceEEEEECCCCCEEEEEecC-------------------------------------------------CeEE
Confidence 22 56789999999988775321 1233
Q ss_pred EEcC-CCC----eeecCC--CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCce-------------
Q 007620 161 LGSL-DGT----AKDFGT--PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL------------- 220 (595)
Q Consensus 161 ~~d~-~g~----~~~lt~--~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~------------- 220 (595)
++++ .++ .+.+.. ...+..++|+|||++|+....+ ..+.+||+..+.
T Consensus 126 iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~ 192 (377)
T 3dwl_C 126 VCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD-------------RKAYVLSAYVRDVDAKPEASVWGSR 192 (377)
T ss_dssp ECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS-------------SCEEEEEECCSSCC-CCCSCSSCSC
T ss_pred EEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC-------------CEEEEEEEEecccCCCccccccccc
Confidence 3344 222 233332 3356789999999988877643 257788865221
Q ss_pred ---EEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc-----e
Q 007620 221 ---VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-----E 292 (595)
Q Consensus 221 ---~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~-----~ 292 (595)
.+.+... +.......+.|+|||+. |+.. .....+.+++. ..++. .
T Consensus 193 ~~~~~~~~~~-----------~~~~~v~~~~~sp~~~~-l~~~------------~~d~~i~iwd~---~~~~~~~~~~~ 245 (377)
T 3dwl_C 193 LPFNTVCAEY-----------PSGGWVHAVGFSPSGNA-LAYA------------GHDSSVTIAYP---SAPEQPPRALI 245 (377)
T ss_dssp CCEEEEEECC-----------CCSSSEEEEEECTTSSC-EEEE------------ETTTEEC-CEE---CSTTSCEEECC
T ss_pred cchhhhhhcc-----------cCCceEEEEEECCCCCE-EEEE------------eCCCcEEEEEC---CCCCCcceeeE
Confidence 1111111 11112345789999883 3332 11235666675 32332 2
Q ss_pred eccccCccccceeecCCCcEEEEE
Q 007620 293 ILHKLDLRFRSVSWCDDSLALVNE 316 (595)
Q Consensus 293 ~l~~~~~~~~~~~wspDg~~l~~~ 316 (595)
.+......+..+.|+|||..|+..
T Consensus 246 ~~~~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 246 TVKLSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp CEECSSSCEEEEEEEETTEEEEEE
T ss_pred eecCCCCceEEEEEcCCCCEEEEE
Confidence 333344557789999999877654
No 140
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.54 E-value=9.6e-05 Score=74.56 Aligned_cols=92 Identities=16% Similarity=0.066 Sum_probs=51.5
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCC-Ccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP-DIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~-~~~ 84 (595)
.+++.|+. +++.... ++.+... ...|||||++|+............+....|.++|+++++...-.... ...
T Consensus 32 ~v~v~D~~----t~~~~~~--i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~ 104 (361)
T 2oiz_A 32 RVHVYDYT----NGKFLGM--VPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV 104 (361)
T ss_dssp EEEEEETT----TCCEEEE--EECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC
T ss_pred eEEEEECC----CCeEEEE--ecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc
Confidence 45666765 5654432 2344344 88999999987665431000000012356889999887753322111 000
Q ss_pred -ccccccceEEecCCcEEEEE
Q 007620 85 -LNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 85 -~~~~~~~~~Wspdg~~l~~~ 104 (595)
.......+.++|||++|+..
T Consensus 105 ~~g~~p~~i~~spdg~~l~v~ 125 (361)
T 2oiz_A 105 QGLNYDGLFRQTTDGKFIVLQ 125 (361)
T ss_dssp CBCCCGGGEEECTTSSEEEEE
T ss_pred ccCCCcceEEECCCCCEEEEE
Confidence 01124578999999998875
No 141
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.53 E-value=0.00016 Score=72.82 Aligned_cols=121 Identities=10% Similarity=0.056 Sum_probs=68.4
Q ss_pred cCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecC-CCCCCCCcccc
Q 007620 40 PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS-SRRDPPKKTMV 118 (595)
Q Consensus 40 PDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~-~~~~~~~~~~~ 118 (595)
||+++ +|+...+.. . -....|+++|.++++......... .. .+.+||||+.|+..... .+..
T Consensus 13 ~~~~~-~yv~~~~~~-~--~~d~~v~v~D~~t~~~~~~i~~g~-----~p-~i~~spdg~~lyv~~~~~~~~~------- 75 (361)
T 2oiz_A 13 PQENR-IYVMDSVFM-H--LTESRVHVYDYTNGKFLGMVPTAF-----NG-HVQVSNDGKKIYTMTTYHERIT------- 75 (361)
T ss_dssp CGGGE-EEEEECCGG-G--GGGCEEEEEETTTCCEEEEEECCE-----EE-EEEECTTSSEEEEEEEEETTSS-------
T ss_pred CCCCE-EEEECCCCC-c--cccCeEEEEECCCCeEEEEecCCC-----CC-ceEECCCCCEEEEEEecccccc-------
Confidence 47776 455543110 0 113589999999887543322111 23 78999999998886210 0000
Q ss_pred CCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecC--C-----CCeeeeeEECCCCCeE
Q 007620 119 PLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG--T-----PAVYTAVEPSPDQKYV 189 (595)
Q Consensus 119 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt--~-----~~~~~~~~~SpDg~~l 189 (595)
.| + ....|.++|+ +++. ..+. . ......+.+||||++|
T Consensus 76 ----------~g-----------------~------~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l 122 (361)
T 2oiz_A 76 ----------RG-----------------K------RSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFI 122 (361)
T ss_dssp ----------SS-----------------C------EEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEE
T ss_pred ----------cC-----------------C------CCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEE
Confidence 00 0 1234667777 4443 2221 1 1123468999999999
Q ss_pred EEEEcccCccccccCcccceeEEEEcCCCceE
Q 007620 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (595)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~ 221 (595)
++..... ...+.++|+++++.
T Consensus 123 ~v~n~~~-----------~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 123 VLQNASP-----------ATSIGIVDVAKGDY 143 (361)
T ss_dssp EEEEESS-----------SEEEEEEETTTTEE
T ss_pred EEECCCC-----------CCeEEEEECCCCcE
Confidence 8875321 24688999986654
No 142
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.52 E-value=3.9e-05 Score=76.13 Aligned_cols=241 Identities=11% Similarity=0.029 Sum_probs=129.9
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
....+.|+|||+ |+++.. ....|+++++++++.+.++.... ..+..+.|++||++++.....
T Consensus 46 ~~~~~~~~~~g~-l~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~----~~~~~i~~~~dg~l~v~~~~~---- 107 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDV---------FEGNIFKINPETKEIKRPFVSHK----ANPAAIKIHKDGRLFVCYLGD---- 107 (333)
T ss_dssp CEEEEEECTTSC-EEEEET---------TTCEEEEECTTTCCEEEEEECSS----SSEEEEEECTTSCEEEEECTT----
T ss_pred cccCcEECCCCC-EEEEEC---------CCCEEEEEeCCCCcEEEEeeCCC----CCcceEEECCCCcEEEEeCCC----
Confidence 457899999998 555542 24689999999998777652221 145688999999855543110
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCC-Ceee-cCC---CCeeeeeEECCCC
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKD-FGT---PAVYTAVEPSPDQ 186 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~-lt~---~~~~~~~~~SpDg 186 (595)
+ . ....|++++.++ ..+. +.. ......+.++|||
T Consensus 108 ------------------~----------------~-------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g 146 (333)
T 2dg1_A 108 ------------------F----------------K-------STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKG 146 (333)
T ss_dssp ------------------S----------------S-------SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTS
T ss_pred ------------------C----------------C-------CCceEEEEeCCCCEEEEEEccCccCCcccceEECCCC
Confidence 0 0 023577788744 4442 221 1234578999999
Q ss_pred CeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCC
Q 007620 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (595)
Q Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (595)
+ |+++...... ......|+++|.++++.+.+.... .....+.|+|||+. |++...
T Consensus 147 ~-l~v~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~i~~~~dg~~-l~v~~~---- 201 (333)
T 2dg1_A 147 G-FYFTDFRGYS------TNPLGGVYYVSPDFRTVTPIIQNI-------------SVANGIALSTDEKV-LWVTET---- 201 (333)
T ss_dssp C-EEEEECCCBT------TBCCEEEEEECTTSCCEEEEEEEE-------------SSEEEEEECTTSSE-EEEEEG----
T ss_pred C-EEEEeccccc------cCCCceEEEEeCCCCEEEEeecCC-------------CcccceEECCCCCE-EEEEeC----
Confidence 6 4444332100 001347899998876655543210 01235788999873 544311
Q ss_pred CcccccCCcceEEeccCCCCCCCC-ceec-----cccC--ccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCc
Q 007620 267 DANVEVSPRDIIYTQPAEPAEGEK-PEIL-----HKLD--LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (595)
Q Consensus 267 ~~~~~~~~~~~~~~~d~~~~~g~~-~~~l-----~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~ 338 (595)
....+++++. .+.+. ...+ .... .....+.++++|..++... ....|+++|+++ ...
T Consensus 202 -------~~~~i~~~d~--~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~----~~~~v~~~d~~g--~~~ 266 (333)
T 2dg1_A 202 -------TANRLHRIAL--EDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMY----GQGRVLVFNKRG--YPI 266 (333)
T ss_dssp -------GGTEEEEEEE--CTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEE----TTTEEEEECTTS--CEE
T ss_pred -------CCCeEEEEEe--cCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEc----CCCEEEEECCCC--CEE
Confidence 1235666664 11122 2111 1111 1344577888988665542 123788899865 222
Q ss_pred EEEeeccc-ccccCCCCCCCeeeCCCCCEEEEEeee
Q 007620 339 RVLFDRVF-ENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (595)
Q Consensus 339 ~~l~~~~~-~~~~~~~~~~~~~~~~dg~~l~~~~~~ 373 (595)
+.+..... ......+ ..+.+++||+.||+....
T Consensus 267 ~~~~~~~~~~g~~~~~--~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 267 GQILIPGRDEGHMLRS--THPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEECTTGGGTCSCBC--CEEEECTTSCEEEEEEEC
T ss_pred EEEEcCCCccccccCc--ceEEECCCCCEEEEEeCc
Confidence 22211100 0000001 126788998888877643
No 143
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.52 E-value=1.2e-05 Score=81.01 Aligned_cols=214 Identities=14% Similarity=0.182 Sum_probs=120.1
Q ss_pred eeeEEEecCCCCCCCC---ceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCC
Q 007620 5 TGIGIHRLLPDDSLGP---EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~---~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~ 81 (595)
..|.|+|+. +++ ...+.. ....+....|+|||+.|+.... + ..|.++++.+++........
T Consensus 30 ~~v~i~~~~----~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~--------d--g~i~vwd~~~~~~~~~~~~~ 93 (372)
T 1k8k_C 30 HEVHIYEKS----GNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGT--------D--RNAYVWTLKGRTWKPTLVIL 93 (372)
T ss_dssp SEEEEEEEE----TTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEET--------T--SCEEEEEEETTEEEEEEECC
T ss_pred CEEEEEeCC----CCcEEeeeeecC--CCCcccEEEEeCCCCEEEEEcC--------C--CeEEEEECCCCeeeeeEEee
Confidence 358888987 553 344442 2335889999999998887653 2 34666677777633322111
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEE
Q 007620 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (595)
Q Consensus 82 ~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (595)
. ....+..+.|+|+++.|+....+ ..|.+
T Consensus 94 ~--~~~~v~~~~~~~~~~~l~~~~~d-------------------------------------------------~~v~i 122 (372)
T 1k8k_C 94 R--INRAARCVRWAPNEKKFAVGSGS-------------------------------------------------RVISI 122 (372)
T ss_dssp C--CSSCEEEEEECTTSSEEEEEETT-------------------------------------------------SSEEE
T ss_pred c--CCCceeEEEECCCCCEEEEEeCC-------------------------------------------------CEEEE
Confidence 1 01246789999999988775311 11222
Q ss_pred EcC-CCC----eeecCC--CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC-----------------
Q 007620 162 GSL-DGT----AKDFGT--PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD----------------- 217 (595)
Q Consensus 162 ~d~-~g~----~~~lt~--~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~----------------- 217 (595)
+++ .++ ...+.. ...+..+.|+||++.|+..... ..+.+||+.
T Consensus 123 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~~~~~~~ 189 (372)
T 1k8k_C 123 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-------------FKCRIFSAYIKEVEERPAPTPWGSKM 189 (372)
T ss_dssp EEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT-------------SCEEEEECCCTTTSCCCCCBTTBSCC
T ss_pred EEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC-------------CCEEEEEccccccccccccccccccc
Confidence 333 221 122211 2345689999999988877542 367788853
Q ss_pred --CceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-ec
Q 007620 218 --GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-IL 294 (595)
Q Consensus 218 --g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l 294 (595)
+.....+... ......+.|+|+++. |+.. .....+.+++. ..++.. .+
T Consensus 190 ~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~-l~~~------------~~d~~i~i~d~---~~~~~~~~~ 240 (372)
T 1k8k_C 190 PFGELMFESSSS-------------CGWVHGVCFSANGSR-VAWV------------SHDSTVCLADA---DKKMAVATL 240 (372)
T ss_dssp CTTCEEEECCCC-------------SSCEEEEEECSSSSE-EEEE------------ETTTEEEEEEG---GGTTEEEEE
T ss_pred chhhheEecCCC-------------CCeEEEEEECCCCCE-EEEE------------eCCCEEEEEEC---CCCceeEEE
Confidence 2222222211 011245789999873 3332 11235667775 323332 33
Q ss_pred cccCccccceeecCCCcEEEEEEeecccceEEEEEe
Q 007620 295 HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (595)
Q Consensus 295 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d 330 (595)
......+..+.|+||+..++.. .++...+|.++
T Consensus 241 ~~~~~~v~~~~~~~~~~~l~~~---~d~~i~i~~~~ 273 (372)
T 1k8k_C 241 ASETLPLLAVTFITESSLVAAG---HDCFPVLFTYD 273 (372)
T ss_dssp ECSSCCEEEEEEEETTEEEEEE---TTSSCEEEEEE
T ss_pred ccCCCCeEEEEEecCCCEEEEE---eCCeEEEEEcc
Confidence 3334456788999999866654 23444555544
No 144
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.49 E-value=3.3e-05 Score=77.67 Aligned_cols=228 Identities=14% Similarity=0.148 Sum_probs=119.5
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceE-ecccCCCccccccccceEEecC--CcEEEEEecCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNN--STLLIFTIPSS 108 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~-~lt~~~~~~~~~~~~~~~Wspd--g~~l~~~~~~~ 108 (595)
.+....|||||++||.... ++.-.||-++..+++.. .+..... .+..+.|+++ ++.|+....+
T Consensus 13 ~v~~~~~s~~~~~l~~~~~--------dg~i~iw~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~~~d- 78 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSS--------DKTIKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASCSYD- 78 (379)
T ss_dssp CEEEEEECSSSSEEEEEET--------TSCEEEEEEETTEEEEEEEECCCSS-----CEEEEEECCGGGCSEEEEEETT-
T ss_pred cEEEEEEcCCCCEEEEEEC--------CCcEEEEecCCCcceeeeEecCCCC-----cEEEEEeCCCCCCCEEEEeccC-
Confidence 5888999999999887643 33445554432233332 2322222 4678999977 7777664211
Q ss_pred CCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC---eeecC-CCCeeeeeEEC
Q 007620 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFG-TPAVYTAVEPS 183 (595)
Q Consensus 109 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~---~~~lt-~~~~~~~~~~S 183 (595)
..|.++++ +++ ...+. ....+..++|+
T Consensus 79 ------------------------------------------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 110 (379)
T 3jrp_A 79 ------------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWA 110 (379)
T ss_dssp ------------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred ------------------------------------------------CEEEEEEcCCCceeEeeeecCCCcceEEEEeC
Confidence 12334444 332 11222 22346689999
Q ss_pred CC--CCeEEEEEcccCccccccCcccceeEEEEcCCCce---EEEeccCCCCccCCccccccccCCCCceeec-------
Q 007620 184 PD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL---VRELCDLPPAEDIPVCYNSVREGMRSISWRA------- 251 (595)
Q Consensus 184 pD--g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp------- 251 (595)
|+ ++.|+..... ..+.+||+..+. ...+.... .....+.|+|
T Consensus 111 ~~~~~~~l~~~~~d-------------~~i~v~d~~~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 111 PHEYGPLLLVASSD-------------GKVSVVEFKENGTTSPIIIDAHA-------------IGVNSASWAPATIEEDG 164 (379)
T ss_dssp CGGGCSEEEEEETT-------------SEEEEEECCTTSCCCEEEEECCT-------------TCEEEEEECCCC-----
T ss_pred CCCCCCEEEEecCC-------------CcEEEEecCCCCceeeEEecCCC-------------CceEEEEEcCccccccc
Confidence 99 8888877642 368889987542 12221110 1123577888
Q ss_pred ------CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-----eccccCccccceeecCC---CcEEEEEE
Q 007620 252 ------DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-----ILHKLDLRFRSVSWCDD---SLALVNET 317 (595)
Q Consensus 252 ------dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-----~l~~~~~~~~~~~wspD---g~~l~~~~ 317 (595)
|+.. ++.. .....+.++|+ ..+... .+......+..+.|+|+ +..|+...
T Consensus 165 ~~~~~~~~~~-l~~~------------~~dg~i~i~d~---~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 165 EHNGTKESRK-FVTG------------GADNLVKIWKY---NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp -----CTTCE-EEEE------------ETTSCEEEEEE---ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred cccCCCCCCE-EEEE------------eCCCeEEEEEe---cCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 4552 3222 11235666665 222211 12223445778999999 66666653
Q ss_pred eecccceEEEEEeCCCCCCC-cEEEeec-ccccccCCCCCCCeeeCCCCCEEEEEee
Q 007620 318 WYKTSQTRTWLVCPGSKDVA-PRVLFDR-VFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (595)
Q Consensus 318 ~~~~~~~~L~~~d~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 372 (595)
.++. |.++|+.+++.. ...+... .....+ ..+.|+++|+.|+....
T Consensus 229 --~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~v-----~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 229 --QDRT--CIIWTQDNEQGPWKKTLLKEEKFPDVL-----WRASWSLSGNVLALSGG 276 (379)
T ss_dssp --TTSC--EEEEEESSTTSCCEEEESSSSCCSSCE-----EEEEECSSSCCEEEEES
T ss_pred --CCCE--EEEEeCCCCCccceeeeeccccCCCcE-----EEEEEcCCCCEEEEecC
Confidence 2343 444555553111 1222211 000000 12789999998776653
No 145
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.48 E-value=0.00017 Score=73.83 Aligned_cols=301 Identities=13% Similarity=0.094 Sum_probs=150.3
Q ss_pred ccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCcccc
Q 007620 39 SPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMV 118 (595)
Q Consensus 39 SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~ 118 (595)
.||++++ |+.+.... .....|.++|+++++...-..... .. .+.+||||+.|++.....
T Consensus 81 ~~~~~~v-yV~n~~~~----~~~~~VsVID~~t~~vv~~I~vG~-----~P-gia~SpDgk~lyVan~~~---------- 139 (426)
T 3c75_H 81 APDARRV-YIQDPAHF----AAITQQFVIDGSTGRILGMTDGGF-----LP-HPVAAEDGSFFAQASTVF---------- 139 (426)
T ss_dssp CCCTTEE-EEEECTTT----CSSEEEEEEETTTTEEEEEEEECS-----SC-EEEECTTSSCEEEEEEEE----------
T ss_pred CCCCCEE-EEECCCcC----CCCCeEEEEECCCCEEEEEEECCC-----CC-ceEECCCCCEEEEEeccc----------
Confidence 3788875 55543100 001789999999987543322222 23 789999999988862100
Q ss_pred CCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCee-ecC-C-C------CeeeeeEECCCCCe
Q 007620 119 PLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFG-T-P------AVYTAVEPSPDQKY 188 (595)
Q Consensus 119 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~-~lt-~-~------~~~~~~~~SpDg~~ 188 (595)
+ +.. .. .....|.++|. ++++. .|. . + ..-..+.+||||++
T Consensus 140 -----------~-----~~~-------~G------~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~ 190 (426)
T 3c75_H 140 -----------E-----RIA-------RG------KRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKN 190 (426)
T ss_dssp -----------E-----ETT-------EE------EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSE
T ss_pred -----------c-----ccc-------cC------CCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCE
Confidence 0 000 00 01346888888 55432 332 1 1 12247899999999
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCC-CCceeecCCCeeEEEEEeecCC
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGM-RSISWRADKPSTLYWVEAQDRG 266 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~-~~~~wspdg~~~l~~~~~~d~~ 266 (595)
|++..... ...|.++|+.+++. ..+. .+.... ....+. ..+..++||+ ++++.. .
T Consensus 191 lyV~n~~~-----------~~~VsVID~~t~kvv~~I~-v~g~~~------~~p~g~~~~v~~~~dG~--~~~V~~-~-- 247 (426)
T 3c75_H 191 LLFYQFSP-----------APAVGVVDLEGKTFDRMLD-VPDCYH------IFPASPTVFYMNCRDGS--LARVDF-A-- 247 (426)
T ss_dssp EEEEECSS-----------SCEEEEEETTTTEEEEEEE-CCSEEE------EEEEETTEEEEEETTSS--EEEEEC-C--
T ss_pred EEEEecCC-----------CCeEEEEECCCCeEEEEEE-cCCcee------eccCCCcEEEEEcCCCC--EEEEEC-C--
Confidence 98885321 23789999987655 3332 110000 000000 1133455554 333311 1
Q ss_pred CcccccCCcceEEeccCCCCCCCCcee----ccc--cCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEE
Q 007620 267 DANVEVSPRDIIYTQPAEPAEGEKPEI----LHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (595)
Q Consensus 267 ~~~~~~~~~~~~~~~d~~~~~g~~~~~----l~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~ 340 (595)
+ ++... ... .......+.+++|+..+++... . ..++++|..+. ..+.
T Consensus 248 --------------------~-~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~--~--g~V~ViD~~~~--~~~v 300 (426)
T 3c75_H 248 --------------------D-GETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY--T--GKIFQADLTAE--GATF 300 (426)
T ss_dssp --------------------T-TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT--T--SEEEEEEECSS--CEEE
T ss_pred --------------------C-CcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC--C--CcEEEEeccCC--ceEE
Confidence 1 11110 010 0111234567899887666542 2 37999998762 3222
Q ss_pred Eeeccc-----ccccCCCCC-CCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecC
Q 007620 341 LFDRVF-----ENVYSDPGS-PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (595)
Q Consensus 341 l~~~~~-----~~~~~~~~~-~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (595)
+-...+ ...-..|++ ..+.+++||+++|+...+... + +.......+..+|+++.+...-+...
T Consensus 301 ~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~-g----------thk~~s~~VsVID~~T~kvv~~I~vg 369 (426)
T 3c75_H 301 RAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE-W----------KHKAASRFVVVLNAETGERINKIELG 369 (426)
T ss_dssp CCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT-T----------CTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred eeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc-c----------cccCCCCEEEEEECCCCeEEEEEECC
Confidence 211000 000001111 235778888888877543110 0 00000112446788888755433211
Q ss_pred ccccceeeEEeeeCCCcccccccCC-EEEEEEecCCCcceEEEEeCCCCcee
Q 007620 415 REKYFETAVALVFGQGEEDINLNQL-KILTSKESKTEITQYHILSWPLKKSS 465 (595)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~s~d~~-~l~~~~~s~~~p~~l~~~d~~~~~~~ 465 (595)
..+. ...|++|++ .++.... ....|.++|+.++++.
T Consensus 370 -----~~P~-------gia~spDg~~~lyv~n~---~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 370 -----HEID-------SINVSQDAEPLLYALSA---GTQTLHIYDAATGEEL 406 (426)
T ss_dssp -----EEEC-------EEEECCSSSCEEEEEET---TTTEEEEEETTTCCEE
T ss_pred -----CCcC-------eEEEccCCCEEEEEEcC---CCCeEEEEECCCCCEE
Confidence 1122 245889998 5554442 2467999998877654
No 146
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.47 E-value=2.1e-05 Score=80.33 Aligned_cols=78 Identities=15% Similarity=0.130 Sum_probs=51.0
Q ss_pred eeEEEecCCCCCCCCce-eeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 6 GIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~-~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.|.|+|+. +++.. .+.. ....+....|+|||++|+..+. ...|.++|+.+++.........
T Consensus 146 ~i~iwd~~----~~~~~~~~~~--h~~~v~~~~~~p~~~~l~s~s~----------d~~v~iwd~~~~~~~~~~~~~~-- 207 (393)
T 1erj_A 146 LIRIWDIE----NRKIVMILQG--HEQDIYSLDYFPSGDKLVSGSG----------DRTVRIWDLRTGQCSLTLSIED-- 207 (393)
T ss_dssp CEEEEETT----TTEEEEEECC--CSSCEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECSS--
T ss_pred eEEEEECC----CCcEEEEEcc--CCCCEEEEEEcCCCCEEEEecC----------CCcEEEEECCCCeeEEEEEcCC--
Confidence 36777876 45443 3332 2235788999999998876542 2456777998887554433332
Q ss_pred ccccccceEEec-CCcEEEEE
Q 007620 85 LNAVFGSFVWVN-NSTLLIFT 104 (595)
Q Consensus 85 ~~~~~~~~~Wsp-dg~~l~~~ 104 (595)
.+..+.|+| ||+.|+..
T Consensus 208 ---~v~~~~~~~~~~~~l~~~ 225 (393)
T 1erj_A 208 ---GVTTVAVSPGDGKYIAAG 225 (393)
T ss_dssp ---CEEEEEECSTTCCEEEEE
T ss_pred ---CcEEEEEECCCCCEEEEE
Confidence 466889998 88877765
No 147
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.47 E-value=6.2e-05 Score=77.15 Aligned_cols=90 Identities=17% Similarity=-0.057 Sum_probs=52.2
Q ss_pred eeeEEEecCCCCCCCCce-eeecCCCCCcccceEEccCCCEEEEEEecccc--cccCCCceEEEEEECCCCceEecccCC
Q 007620 5 TGIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEE--DNVSSCKLRVWIADAETGEAKPLFESP 81 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~-~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~--~~~~~~~~~L~v~d~~~g~~~~lt~~~ 81 (595)
..|.+.|+. +++.. +|. -+... ...+||||++|+........ .+ +....|.++|+.+++...-....
T Consensus 99 ~~VsVID~~----t~~vv~~I~---vG~~P-gia~SpDgk~lyVan~~~~~~~~G--~~~~~VsviD~~t~~vv~~I~v~ 168 (426)
T 3c75_H 99 TQQFVIDGS----TGRILGMTD---GGFLP-HPVAAEDGSFFAQASTVFERIARG--KRTDYVEVFDPVTFLPIADIELP 168 (426)
T ss_dssp EEEEEEETT----TTEEEEEEE---ECSSC-EEEECTTSSCEEEEEEEEEETTEE--EEEEEEEEECTTTCCEEEEEEET
T ss_pred CeEEEEECC----CCEEEEEEE---CCCCC-ceEECCCCCEEEEEeccccccccC--CCCCEEEEEECCCCcEEEEEECC
Confidence 456777776 44443 332 33345 89999999987665421000 00 12467999999998754321111
Q ss_pred --Ccc-ccccccceEEecCCcEEEEE
Q 007620 82 --DIC-LNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 82 --~~~-~~~~~~~~~Wspdg~~l~~~ 104 (595)
... .......+.++|||++|++.
T Consensus 169 g~~r~~~g~~P~~~~~spDGk~lyV~ 194 (426)
T 3c75_H 169 DAPRFLVGTYQWMNALTPDNKNLLFY 194 (426)
T ss_dssp TCCCCCBSCCGGGSEECTTSSEEEEE
T ss_pred CccccccCCCcceEEEcCCCCEEEEE
Confidence 000 00123478999999998886
No 148
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.47 E-value=3.2e-05 Score=76.77 Aligned_cols=77 Identities=6% Similarity=-0.024 Sum_probs=55.1
Q ss_pred eeEEEecCCCCCCCC----ceeeecCCCCCcccceEEccCCC-EEEEEEecccccccCCCceEEEEEEC-CCCceEeccc
Q 007620 6 GIGIHRLLPDDSLGP----EKEVHGYPDGAKINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADA-ETGEAKPLFE 79 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~----~~~lt~~~~~~~~~~~~~SPDG~-~laf~~~~~~~~~~~~~~~~L~v~d~-~~g~~~~lt~ 79 (595)
.|.|+++. +++ .+.+.. ....+....|+|||+ .|+.... ...|.++++ .+++...+..
T Consensus 34 ~v~iw~~~----~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~----------dg~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 34 SLTVYKFD----IQAKNVDLLQSLR--YKHPLLCCNFIDNTDLQIYVGTV----------QGEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp EEEEEEEE----TTTTEEEEEEEEE--CSSCEEEEEEEESSSEEEEEEET----------TSCEEEECSSSSSSEEECBS
T ss_pred eEEEEEeC----CCCccccceeeee--cCCceEEEEECCCCCcEEEEEcC----------CCeEEEEEeccCCceEeccc
Confidence 57888887 454 445543 233588999999999 7776542 256788899 8888877754
Q ss_pred --CCCccccccccceEEecCCcEEEEE
Q 007620 80 --SPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 80 --~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
... .+..+.|+| ++.|+..
T Consensus 98 ~~~~~-----~v~~l~~~~-~~~l~s~ 118 (342)
T 1yfq_A 98 NEANL-----GICRICKYG-DDKLIAA 118 (342)
T ss_dssp CCCCS-----CEEEEEEET-TTEEEEE
T ss_pred cCCCC-----ceEEEEeCC-CCEEEEE
Confidence 333 567899999 8877765
No 149
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.46 E-value=0.00013 Score=71.22 Aligned_cols=144 Identities=6% Similarity=-0.100 Sum_probs=77.6
Q ss_pred ceEEEEcCC-CCeeecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCc
Q 007620 157 AQLVLGSLD-GTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (595)
Q Consensus 157 ~~l~~~d~~-g~~~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~ 235 (595)
..|++++.+ ++.+.+..+.....+.++|||+ |++... ..|+++|.++++.+.+...+.. .+.
T Consensus 35 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~-l~v~~~--------------~~l~~~d~~~g~~~~~~~~~~~--~~~ 97 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMDAPVSSVALRQSGG-YVATIG--------------TKFCALNWKEQSAVVLATVDND--KKN 97 (297)
T ss_dssp TEEEEEETTTCCEEEEECSSCEEEEEEBTTSS-EEEEET--------------TEEEEEETTTTEEEEEEECCTT--CSS
T ss_pred CEEEEEECCCCcEEEEeCCCceEEEEECCCCC-EEEEEC--------------CeEEEEECCCCcEEEEEecCCC--CCC
Confidence 357777773 4444443344556789999999 444431 2688999988887776543210 000
Q ss_pred cccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEE
Q 007620 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVN 315 (595)
Q Consensus 236 ~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~ 315 (595)
.....+.+.|||+ +++..................+|.++. + ++...+.........+.|+||++.+++
T Consensus 98 ------~~~~di~~d~dG~--l~~~~~~~~~~~~~~~~~~~~l~~~d~---~-g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 98 ------NRFNDGKVDPAGR--YFAGTMAEETAPAVLERHQGALYSLFP---D-HHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp ------EEEEEEEECTTSC--EEEEEEECCSBTTBCCTTCEEEEEECT---T-SCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred ------CCCCCEEECCCCC--EEEecCCcccccccccCCCcEEEEEEC---C-CCEEEEeeccccccceEEcCCCCEEEE
Confidence 1123467788887 544321111000000012245777674 3 344443332233456899999987654
Q ss_pred EEeecccceEEEEEeCC
Q 007620 316 ETWYKTSQTRTWLVCPG 332 (595)
Q Consensus 316 ~~~~~~~~~~L~~~d~~ 332 (595)
... ....|++++++
T Consensus 166 ~~~---~~~~i~~~~~d 179 (297)
T 3g4e_A 166 IDS---LSYSVDAFDYD 179 (297)
T ss_dssp EEG---GGTEEEEEEEC
T ss_pred ecC---CCCcEEEEecc
Confidence 431 22378888763
No 150
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.46 E-value=9.2e-06 Score=85.35 Aligned_cols=190 Identities=12% Similarity=0.023 Sum_probs=106.3
Q ss_pred CCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc-ccccccceEEecCCcEEEEEecCC
Q 007620 30 GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC-LNAVFGSFVWVNNSTLLIFTIPSS 108 (595)
Q Consensus 30 ~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~-~~~~~~~~~Wspdg~~l~~~~~~~ 108 (595)
...+...+|||||++||-.+. ++. +.+++.++ ....+. .... ....+.+++|||||+.|+....+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~--------dg~--V~iwd~~~-~l~~l~--~~~~~~~~sv~svafSPDG~~LAsgs~D- 150 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSN--------NGN--VSVFKDNK-MLTNLD--SKGNLSSRTYHCFEWNPIESSIVVGNED- 150 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEET--------TSC--EEEEETTE-EEEECC--CSSCSTTTCEEEEEECSSSSCEEEEETT-
T ss_pred CCcEEEEEECCCCCEEEEEeC--------CCc--EEEEeCCc-eeeecc--CCCccccccEEEEEEcCCCCEEEEEcCC-
Confidence 446889999999999998764 233 44446543 222222 1110 01136689999999999886321
Q ss_pred CCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe--------eecC-----CC
Q 007620 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA--------KDFG-----TP 174 (595)
Q Consensus 109 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~--------~~lt-----~~ 174 (595)
| .|-++++ ++.. ..+. ..
T Consensus 151 ---------------------G---------------------------tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~ 182 (588)
T 2j04_A 151 ---------------------G---------------------------ELQFFSIRKNSENTPEFYFESSIRLSDAGSK 182 (588)
T ss_dssp ---------------------S---------------------------EEEEEECCCCTTTCCCCEEEEEEECSCTTCC
T ss_pred ---------------------C---------------------------EEEEEECCCCccccccceeeeeeeccccccc
Confidence 1 2223333 2211 1121 11
Q ss_pred CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEE----EeccCCCCccCCccccccccCCCCceee
Q 007620 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR----ELCDLPPAEDIPVCYNSVREGMRSISWR 250 (595)
Q Consensus 175 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~ws 250 (595)
..+..++||||| |+..+.+ ..+.+||+.++... .+... ....+..+.|+
T Consensus 183 ~~V~sVawSPdg--Laass~D-------------~tVrlWd~~~~~~~~~~~tL~~~------------h~~~V~svaFs 235 (588)
T 2j04_A 183 DWVTHIVWYEDV--LVAALSN-------------NSVFSMTVSASSHQPVSRMIQNA------------SRRKITDLKIV 235 (588)
T ss_dssp CCEEEEEEETTE--EEEEETT-------------CCEEEECCCSSSSCCCEEEEECC------------CSSCCCCEEEE
T ss_pred ccEEEEEEcCCc--EEEEeCC-------------CeEEEEECCCCccccceeeeccc------------ccCcEEEEEEE
Confidence 245688999999 5555432 36889998876532 23111 01124567888
Q ss_pred cCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecc-ccCccccceee--cCCCcEEEEEEeecccceEEE
Q 007620 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFRSVSW--CDDSLALVNETWYKTSQTRTW 327 (595)
Q Consensus 251 pdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~-~~~~~~~~~~w--spDg~~l~~~~~~~~~~~~L~ 327 (595)
|. .|+.. ....+.+|+. .+++...+. .....+..+.| |||+..++.. .+++. +||
T Consensus 236 --g~-~LASa-------------~~~tIkLWd~---~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a--~edG~-klw 293 (588)
T 2j04_A 236 --DY-KVVLT-------------CPGYVHKIDL---KNYSISSLKTGSLENFHIIPLNHEKESTILLMS--NKTSY-KVL 293 (588)
T ss_dssp --TT-EEEEE-------------CSSEEEEEET---TTTEEEEEECSCCSCCCEEEETTCSSCEEEEEC--SSCEE-EEE
T ss_pred --CC-EEEEE-------------eCCeEEEEEC---CCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEE--cCCCC-EEE
Confidence 33 24332 1246777786 444442332 34445677899 9999766653 23344 677
Q ss_pred EEe
Q 007620 328 LVC 330 (595)
Q Consensus 328 ~~d 330 (595)
.+|
T Consensus 294 ~~d 296 (588)
T 2j04_A 294 LED 296 (588)
T ss_dssp ESS
T ss_pred eec
Confidence 754
No 151
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.45 E-value=4.9e-05 Score=74.55 Aligned_cols=214 Identities=12% Similarity=0.113 Sum_probs=118.8
Q ss_pred eeEEEecCCCCCCCCc-eeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecc-cCCCc
Q 007620 6 GIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF-ESPDI 83 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~-~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt-~~~~~ 83 (595)
.+.|.|+. ++.. +.+.. ....+....|+|||+.|+..+. ...|.++|+.+++..... ....
T Consensus 36 ~v~lWd~~----~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~----------d~~i~vwd~~~~~~~~~~~~h~~- 98 (304)
T 2ynn_A 36 RVELWNYE----TQVEVRSIQV--TETPVRAGKFIARKNWIIVGSD----------DFRIRVFNYNTGEKVVDFEAHPD- 98 (304)
T ss_dssp EEEEEETT----TTEEEEEEEC--CSSCEEEEEEEGGGTEEEEEET----------TSEEEEEETTTCCEEEEEECCSS-
T ss_pred cEEEEECC----CCceeEEeec--cCCcEEEEEEeCCCCEEEEECC----------CCEEEEEECCCCcEEEEEeCCCC-
Confidence 46777887 4433 34442 2225778899999998876542 256777799888754433 2222
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEc
Q 007620 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 163 (595)
.+..+.|+|+++.|+....+ ..|.++|
T Consensus 99 ----~v~~~~~~~~~~~l~sgs~D-------------------------------------------------~~v~lWd 125 (304)
T 2ynn_A 99 ----YIRSIAVHPTKPYVLSGSDD-------------------------------------------------LTVKLWN 125 (304)
T ss_dssp ----CEEEEEECSSSSEEEEEETT-------------------------------------------------SCEEEEE
T ss_pred ----cEEEEEEcCCCCEEEEECCC-------------------------------------------------CeEEEEE
Confidence 46789999999987764221 1233334
Q ss_pred C-CC-Ceee-cC-CCCeeeeeEECCC-CCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccc
Q 007620 164 L-DG-TAKD-FG-TPAVYTAVEPSPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCY 237 (595)
Q Consensus 164 ~-~g-~~~~-lt-~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~ 237 (595)
+ ++ ...+ +. ....+..++|+|+ +..|+....+ ..+.+||+..+.. ..+....
T Consensus 126 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D-------------~~v~iwd~~~~~~~~~~~~~~--------- 183 (304)
T 2ynn_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-------------RTVKVWSLGQSTPNFTLTTGQ--------- 183 (304)
T ss_dssp GGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT-------------SEEEEEETTCSSCSEEEECCC---------
T ss_pred CCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC-------------CeEEEEECCCCCccceeccCC---------
Confidence 4 22 2222 22 2234568899994 6666655432 3688899864432 2221110
Q ss_pred cccccCCCCceeec--CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc-eeccccCccccceeecCCCcEEE
Q 007620 238 NSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALV 314 (595)
Q Consensus 238 ~~~~~~~~~~~wsp--dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~~~~~~~~~~wspDg~~l~ 314 (595)
........|+| ++.. |+.. .....+.+||+ ..++. ..+......+..+.|+|++..|+
T Consensus 184 ---~~~v~~~~~~~~~~~~~-l~s~------------s~D~~i~iWd~---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 184 ---ERGVNYVDYYPLPDKPY-MITA------------SDDLTIKIWDY---QTKSCVATLEGHMSNVSFAVFHPTLPIII 244 (304)
T ss_dssp ---TTCEEEEEECCSTTCCE-EEEE------------ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred ---cCcEEEEEEEEcCCCCE-EEEE------------cCCCeEEEEeC---CCCccceeeCCCCCCEEEEEECCCCCEEE
Confidence 00112345554 4442 2221 12346777786 32232 23333445567789999998877
Q ss_pred EEEeecccceEEEEEeCCCC
Q 007620 315 NETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 315 ~~~~~~~~~~~L~~~d~~~~ 334 (595)
... .++ .|.++|+.+.
T Consensus 245 s~s--~Dg--~i~iWd~~~~ 260 (304)
T 2ynn_A 245 SGS--EDG--TLKIWNSSTY 260 (304)
T ss_dssp EEE--TTS--CEEEEETTTC
T ss_pred EEc--CCC--eEEEEECCCC
Confidence 654 234 4556677763
No 152
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.45 E-value=0.00012 Score=74.14 Aligned_cols=134 Identities=7% Similarity=-0.011 Sum_probs=67.7
Q ss_pred eeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccc-cCCCCceeecCCCeeE
Q 007620 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR-EGMRSISWRADKPSTL 257 (595)
Q Consensus 179 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~wspdg~~~l 257 (595)
.+.+++++..++|... . ..++++|+.++..+.+...+....... ..+.. .+...+..+||++. +
T Consensus 217 ~~~~~~~~~~~~~~~~-~------------~~v~vid~~~~~~~v~~~~~~~~~~~~-~~~~~p~g~~~~~~s~d~~~-l 281 (373)
T 2mad_H 217 QPAQANKSGRIVWPVY-S------------GKILQADISAAGATNKAPIDALSGGRK-ADTWRPGGWQQVAYLKSSDG-I 281 (373)
T ss_pred cceeEecCCEEEEEcC-C------------ceEEEEeccCCcceEeeeeeecCCccc-ccceecCceEeEEECCCCCE-E
Confidence 4667888888777753 1 268889987665444432221100000 00000 01112456777663 5
Q ss_pred EEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 258 YWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 258 ~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
|.... .+.........+.++++|. ..++...-.........+.|||||+.++|..+. +...|.++|+++.
T Consensus 282 yV~~~--~~~~~~~~~~~~~V~VID~---~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~--~~~~V~ViD~~t~ 351 (373)
T 2mad_H 282 YLLTS--EQSAWKLHAAAKEVTSVTG---LVGQTSSQISLGHDVDAISVAQDGGPDLYALSA--GTEVLHIYDAGAG 351 (373)
T ss_pred EEEec--cCCcccccCCCCeEEEEEC---CCCEEEEEEECCCCcCeEEECCCCCeEEEEEcC--CCCeEEEEECCCC
Confidence 44311 1100000011246888886 333443222344457789999999954444322 2248999999884
No 153
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.44 E-value=2.8e-05 Score=77.83 Aligned_cols=135 Identities=12% Similarity=0.162 Sum_probs=84.0
Q ss_pred eeEEEecCCCCCCCCceeeecCC---CCCcccceEEccC----CCEEEEEEecccccccCCCceEEEEEECCCCceEecc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYP---DGAKINFVSWSPD----GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF 78 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~---~~~~~~~~~~SPD----G~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt 78 (595)
.|.|+|+.. +...+.+..+. ....+....|+|+ |+.|+.... ...|.++++.+++.....
T Consensus 45 ~v~vw~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~----------dg~i~v~d~~~~~~~~~~ 111 (366)
T 3k26_A 45 RVTLYECHS---QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS----------RGIIRIINPITMQCIKHY 111 (366)
T ss_dssp EEEEEEECG---GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET----------TCEEEEECTTTCCEEEEE
T ss_pred EEEEEEcCC---CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC----------CCEEEEEEchhceEeeee
Confidence 477888872 33444444322 2235788999999 555555432 357888899888755443
Q ss_pred c-CCCccccccccceEEec-CCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeec
Q 007620 79 E-SPDICLNAVFGSFVWVN-NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTT 156 (595)
Q Consensus 79 ~-~~~~~~~~~~~~~~Wsp-dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (595)
. ... .+..+.|+| +++.|+.... .
T Consensus 112 ~~~~~-----~i~~~~~~~~~~~~l~s~~~-------------------------------------------------d 137 (366)
T 3k26_A 112 VGHGN-----AINELKFHPRDPNLLLSVSK-------------------------------------------------D 137 (366)
T ss_dssp ESCCS-----CEEEEEECSSCTTEEEEEET-------------------------------------------------T
T ss_pred cCCCC-----cEEEEEECCCCCCEEEEEeC-------------------------------------------------C
Confidence 3 222 577899999 8887766421 1
Q ss_pred ceEEEEcC-CCCe-eec---C-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCce
Q 007620 157 AQLVLGSL-DGTA-KDF---G-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (595)
Q Consensus 157 ~~l~~~d~-~g~~-~~l---t-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~ 220 (595)
..|.++|+ +++. ..+ . .......++|+|+|+.|+....+ ..+.+||+.+++
T Consensus 138 g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~ 194 (366)
T 3k26_A 138 HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-------------HSLKLWRINSKR 194 (366)
T ss_dssp SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESCSHH
T ss_pred CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-------------CCEEEEECCCCc
Confidence 23555566 3432 223 1 23356789999999998877642 368889987653
No 154
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.43 E-value=0.0001 Score=71.90 Aligned_cols=231 Identities=10% Similarity=0.001 Sum_probs=126.0
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|+..+.. ++ .+.+.. +. .......++|||+.+ + +. .....|+++++++|+.+.+........
T Consensus 51 ~i~~~~~~----~~-~~~~~~-~~-~~~~~l~~~~dg~l~-v-~~--------~~~~~i~~~d~~~g~~~~~~~~~~~~~ 113 (296)
T 3e5z_A 51 RTWAWSDD----GQ-LSPEMH-PS-HHQNGHCLNKQGHLI-A-CS--------HGLRRLERQREPGGEWESIADSFEGKK 113 (296)
T ss_dssp EEEEEETT----SC-EEEEES-SC-SSEEEEEECTTCCEE-E-EE--------TTTTEEEEECSTTCCEEEEECEETTEE
T ss_pred EEEEEECC----CC-eEEEEC-CC-CCcceeeECCCCcEE-E-Ee--------cCCCeEEEEcCCCCcEEEEeeccCCCC
Confidence 46666765 55 555552 22 246788999999843 3 32 234679999998888776643211110
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC
Q 007620 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 165 (595)
...+..+.++|||+. +++... . |.. ..... .....+ .....||.++.+
T Consensus 114 ~~~~~~i~~d~~G~l-~vtd~~-~--------------------g~~---~~~~~-~~~~~~------~~~~~l~~~~~~ 161 (296)
T 3e5z_A 114 LNSPNDVCLAPDGSL-WFSDPT-Y--------------------GID---KPEEG-YGGEME------LPGRWVFRLAPD 161 (296)
T ss_dssp CCCCCCEEECTTSCE-EEEECS-H--------------------HHH---CGGGS-SCCCCC------SSSCEEEEECTT
T ss_pred CCCCCCEEECCCCCE-EEECCc-c--------------------ccc---ccccc-cccccc------CCCcEEEEECCC
Confidence 112347899999984 443110 0 000 00000 000000 013478888887
Q ss_pred CCeeecCCC-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC-CceE---EEeccCCCCccCCcccccc
Q 007620 166 GTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLV---RELCDLPPAEDIPVCYNSV 240 (595)
Q Consensus 166 g~~~~lt~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~---~~l~~~~~~~~~~~~~~~~ 240 (595)
|+.+.+... .....++|+|||+.| ++... ...|+++++. .+.. ..+.... .
T Consensus 162 g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~~--~--------- 217 (296)
T 3e5z_A 162 GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTG------------DNATHRYCLNARGETEYQGVHFTVE--P--------- 217 (296)
T ss_dssp SCEEEEECCCSSEEEEEECTTSCEE-EEETT------------TTEEEEEEECSSSCEEEEEEEECCS--S---------
T ss_pred CCEEEeecCCCCCccEEECCCCCEE-EEeCC------------CCeEEEEEECCCCcCcCCCeEeeCC--C---------
Confidence 766655433 234578999999998 66432 2378888875 3433 2221211 0
Q ss_pred ccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceee-cCCCcEEEEEEee
Q 007620 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSW-CDDSLALVNETWY 319 (595)
Q Consensus 241 ~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~w-spDg~~l~~~~~~ 319 (595)
..+..+.+.++|. |+.. . ...+++++. +|.....+..... ...+.| +||+..|+....
T Consensus 218 -~~p~~i~~d~~G~--l~v~-~------------~~~v~~~~~---~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~- 276 (296)
T 3e5z_A 218 -GKTDGLRVDAGGL--IWAS-A------------GDGVHVLTP---DGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS- 276 (296)
T ss_dssp -SCCCSEEEBTTSC--EEEE-E------------TTEEEEECT---TSCEEEEEECSSC-CCEEEEESTTSCEEEEEET-
T ss_pred -CCCCeEEECCCCC--EEEE-c------------CCeEEEECC---CCCEEEEEECCCC-ceeEEEECCCCCEEEEEcC-
Confidence 1134577888886 5433 1 235666674 4322223332233 677888 588876655431
Q ss_pred cccceEEEEEeCCCC
Q 007620 320 KTSQTRTWLVCPGSK 334 (595)
Q Consensus 320 ~~~~~~L~~~d~~~~ 334 (595)
..||++++.++
T Consensus 277 ----~~l~~~~~~~~ 287 (296)
T 3e5z_A 277 ----TEFWSIETNVR 287 (296)
T ss_dssp ----TEEEEEECSCC
T ss_pred ----CeEEEEEcccc
Confidence 27999998773
No 155
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.41 E-value=4.8e-05 Score=78.73 Aligned_cols=115 Identities=11% Similarity=0.044 Sum_probs=63.5
Q ss_pred eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCce----EEEeccCCCCccCCccccccccCCCCceeec
Q 007620 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPAEDIPVCYNSVREGMRSISWRA 251 (595)
Q Consensus 176 ~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp 251 (595)
.+..++|+|++..++++... ...|.+||+..+. ...+... ......+.|+|
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~------------dg~i~i~d~~~~~~~~~~~~~~~~-------------~~~v~~i~~~p 287 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVAD------------DQKLMIWDTRNNNTSKPSHTVDAH-------------TAEVNCLSFNP 287 (430)
T ss_dssp CEEEEEECSSCTTEEEEEET------------TSEEEEEETTCSCSSSCSEEEECC-------------SSCEEEEEECS
T ss_pred CEeeeEEeCCCCCEEEEEeC------------CCeEEEEECCCCCCCcceeEeecC-------------CCCeEEEEeCC
Confidence 45689999966555555432 2378899987542 2222111 11234688999
Q ss_pred CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCC-ceeccccCccccceeecCCCcE-EEEEEeecccceEEEEE
Q 007620 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLA-LVNETWYKTSQTRTWLV 329 (595)
Q Consensus 252 dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~-~~~l~~~~~~~~~~~wspDg~~-l~~~~~~~~~~~~L~~~ 329 (595)
+++..++.. .....+.++|+ ...+. ...+......+..+.|+|++.. |+... ..+ .|.++
T Consensus 288 ~~~~~l~tg------------~~dg~v~vwd~--~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~--~d~--~i~iw 349 (430)
T 2xyi_A 288 YSEFILATG------------SADKTVALWDL--RNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDR--RLHVW 349 (430)
T ss_dssp SCTTEEEEE------------ETTSEEEEEET--TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE--TTS--CCEEE
T ss_pred CCCCEEEEE------------eCCCeEEEEeC--CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe--CCC--cEEEE
Confidence 987523222 12245777776 12122 2333344556788999999864 44443 234 34455
Q ss_pred eCCC
Q 007620 330 CPGS 333 (595)
Q Consensus 330 d~~~ 333 (595)
|+..
T Consensus 350 d~~~ 353 (430)
T 2xyi_A 350 DLSK 353 (430)
T ss_dssp EGGG
T ss_pred eCCC
Confidence 5544
No 156
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.37 E-value=3.1e-05 Score=88.10 Aligned_cols=203 Identities=12% Similarity=0.069 Sum_probs=114.6
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+...+|||||+.||.... ...|.+++..+++......... .+..+.|+| |++|+....
T Consensus 19 ~V~~lafspdg~~lAsgs~----------Dg~I~lw~~~~~~~~~~~~~~~-----~V~~l~fsp-g~~L~S~s~----- 77 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATV----------TGEVHIYGQQQVEVVIKLEDRS-----AIKEMRFVK-GIYLVVINA----- 77 (902)
T ss_dssp CEEEEEEETTTTEEEEEET----------TSEEEEECSTTCEEEEECSSCC-----CEEEEEEET-TTEEEEEET-----
T ss_pred CcEEEEECCCCCEEEEEeC----------CCEEEEEeCCCcEEEEEcCCCC-----CEEEEEEcC-CCEEEEEEC-----
Confidence 4888999999998887653 2457777887766544322222 577899999 886555421
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC-eeecCCCCeeeeeEECCCCCeE
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYV 189 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~-~~~lt~~~~~~~~~~SpDg~~l 189 (595)
...|.++|+ +++ ...+.....+..++|+|||++|
T Consensus 78 --------------------------------------------D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l 113 (902)
T 2oaj_A 78 --------------------------------------------KDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWM 113 (902)
T ss_dssp --------------------------------------------TCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEE
T ss_pred --------------------------------------------cCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEE
Confidence 123444555 343 2233333456789999999999
Q ss_pred EEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcc
Q 007620 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (595)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (595)
+....+ ..+.+||+.++......-...... ...+.+.......+.|+|++...++..
T Consensus 114 ~sgs~d-------------g~V~lwd~~~~~~~~~~i~~~~~~-~~~~~~h~~~V~sl~~sp~~~~~l~~g--------- 170 (902)
T 2oaj_A 114 LIGLQN-------------GSMIVYDIDRDQLSSFKLDNLQKS-SFFPAARLSPIVSIQWNPRDIGTVLIS--------- 170 (902)
T ss_dssp EEEETT-------------SCEEEEETTTTEEEEEEECCHHHH-HTCSSSCCCCCCEEEEETTEEEEEEEE---------
T ss_pred EEEcCC-------------CcEEEEECCCCccccceecccccc-ccccccCCCCeEEEEEccCCCCEEEEE---------
Confidence 877642 368899998776532110000000 000011112245689999754333321
Q ss_pred cccCCcceEEeccCCCCCCCCcee-cccc------------------CccccceeecCCCcEEEEEEeecccceEEEEEe
Q 007620 270 VEVSPRDIIYTQPAEPAEGEKPEI-LHKL------------------DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (595)
Q Consensus 270 ~~~~~~~~~~~~d~~~~~g~~~~~-l~~~------------------~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d 330 (595)
.....+ +||+ ..++... +... ...+..+.|+|||..|+... .++ .|.++|
T Consensus 171 ---~~dg~v-lWd~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs--~Dg--~i~lWd 239 (902)
T 2oaj_A 171 ---YEYVTL-TYSL---VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH--EDN--SLVFWD 239 (902)
T ss_dssp ---CSSCEE-EEET---TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE--TTC--CEEEEE
T ss_pred ---eCCCcE-EEEC---CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE--CCC--eEEEEE
Confidence 112345 6675 3223221 1111 13467889999999887754 234 466668
Q ss_pred CCC
Q 007620 331 PGS 333 (595)
Q Consensus 331 ~~~ 333 (595)
+.+
T Consensus 240 ~~~ 242 (902)
T 2oaj_A 240 ANS 242 (902)
T ss_dssp TTT
T ss_pred CCC
Confidence 766
No 157
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.37 E-value=0.00016 Score=72.13 Aligned_cols=143 Identities=14% Similarity=0.170 Sum_probs=82.4
Q ss_pred cccceEEccC---CCEEEEEEecccccccCCCceEEEEEECCCCce-EecccCCCccccccccceEEecC----CcEEEE
Q 007620 32 KINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNN----STLLIF 103 (595)
Q Consensus 32 ~~~~~~~SPD---G~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~-~~lt~~~~~~~~~~~~~~~Wspd----g~~l~~ 103 (595)
.+...+|+|+ |+.++++... + ..|.++++.+++. ..+...........+..+.|+|+ |+.|+.
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~-------~--~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVG-------S--NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEE-------T--TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred ceEEEEEecccCCCCceEEEECC-------C--CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 5778999985 6666665543 2 3677778876543 33432211111124678999999 555555
Q ss_pred EecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-eecC-CCCeeeee
Q 007620 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFG-TPAVYTAV 180 (595)
Q Consensus 104 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~~lt-~~~~~~~~ 180 (595)
... ...|.++++ +++. ..+. ....+..+
T Consensus 91 ~~~-------------------------------------------------dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 91 AGS-------------------------------------------------RGIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp EET-------------------------------------------------TCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred ecC-------------------------------------------------CCEEEEEEchhceEeeeecCCCCcEEEE
Confidence 421 124555666 4432 2332 33456789
Q ss_pred EECC-CCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEE-eccCCCCccCCccccccccCCCCceeecCCCe
Q 007620 181 EPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (595)
Q Consensus 181 ~~Sp-Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~ 255 (595)
.|+| +++.|+....+ ..|.+||+.+++... +..... .......+.|+|++..
T Consensus 122 ~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~ 175 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKD-------------HALRLWNIQTDTLVAIFGGVEG----------HRDEVLSADYDLLGEK 175 (366)
T ss_dssp EECSSCTTEEEEEETT-------------SCEEEEETTTTEEEEEECSTTS----------CSSCEEEEEECTTSSE
T ss_pred EECCCCCCEEEEEeCC-------------CeEEEEEeecCeEEEEeccccc----------ccCceeEEEECCCCCE
Confidence 9999 78887776532 368999988665433 321110 0112346889999873
No 158
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.35 E-value=0.00015 Score=73.67 Aligned_cols=144 Identities=10% Similarity=0.020 Sum_probs=76.0
Q ss_pred eeeeeEECC-CCCeEEEEEcccCccccccCcccceeEEEEcCC-C-ceEEEeccCCCCccCCccccccccCCCCceeecC
Q 007620 176 VYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-G-KLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (595)
Q Consensus 176 ~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (595)
....+.|+| ++..|+....+ ..+.+||+. + ...+.+... ......+.|+||
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D-------------~~v~~wd~~~~~~~~~~~~~h-------------~~~v~~v~~~p~ 260 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCD-------------TTVRLWDLRITSRAVRTYHGH-------------EGDINSVKFFPD 260 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETT-------------SCEEEEETTTTCCCCEEECCC-------------SSCCCEEEECTT
T ss_pred CeEEEEeecCCCCEEEEEECC-------------CeEEEEECCCCCcceEEECCc-------------CCCeEEEEEecC
Confidence 345678876 67766655432 368889976 3 233333221 112356889999
Q ss_pred CCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecc-cc-------CccccceeecCCCcEEEEEEeecccce
Q 007620 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KL-------DLRFRSVSWCDDSLALVNETWYKTSQT 324 (595)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~-~~-------~~~~~~~~wspDg~~l~~~~~~~~~~~ 324 (595)
++. ++.. .....+.+||+ ..++..... .. ...+..+.|+|+|..++... .++
T Consensus 261 ~~~-l~s~------------s~D~~i~lwd~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~--~dg-- 320 (380)
T 3iz6_a 261 GQR-FGTG------------SDDGTCRLFDM---RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY--SNG-- 320 (380)
T ss_dssp SSE-EEEE------------CSSSCEEEEET---TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC--TTS--
T ss_pred CCe-EEEE------------cCCCeEEEEEC---CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE--CCC--
Confidence 973 3221 12235666675 322322211 11 11256789999999877653 223
Q ss_pred EEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 325 RTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 325 ~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
.|+++|+..++ ....+.. ..-... ...+.|+|||+.|+...
T Consensus 321 ~i~vwd~~~~~-~~~~~~~~~~~h~~~-----v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 321 DCYVWDTLLAE-MVLNLGTLQNSHEGR-----ISCLGLSSDGSALCTGS 363 (380)
T ss_dssp CEEEEETTTCC-EEEEECCSCSSCCCC-----CCEEEECSSSSEEEEEC
T ss_pred CEEEEECCCCc-eEEEEecccCCCCCc-----eEEEEECCCCCEEEEee
Confidence 57777876631 1122210 000000 11278999999876554
No 159
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.33 E-value=0.00084 Score=68.97 Aligned_cols=58 Identities=21% Similarity=0.461 Sum_probs=40.5
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
.+-..||+++ .||... ...|+++|+.+|+..++...... ...+.++.|+|||+.|+..
T Consensus 108 ~~~l~wS~~n-~lAvgl-----------d~tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspdg~~lasg 165 (420)
T 4gga_A 108 LNLVDWSSGN-VLAVAL-----------DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVG 165 (420)
T ss_dssp CBCEEECTTS-EEEEEE-----------TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEE
T ss_pred ceeEEECCCC-EEEEEe-----------CCEEEEEECCCCCEEEEEEecCC--CCcEEEEEECCCCCEEEEE
Confidence 4567999865 666543 25688889999987766543221 1146799999999988775
No 160
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.33 E-value=0.00075 Score=67.89 Aligned_cols=90 Identities=19% Similarity=0.021 Sum_probs=51.3
Q ss_pred eeeEEEecCCCCCCCCce-eeecCCCCCcccceEEccCCCEEEEEEecccc--cccCCCceEEEEEECCCCceEecccCC
Q 007620 5 TGIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEE--DNVSSCKLRVWIADAETGEAKPLFESP 81 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~-~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~--~~~~~~~~~L~v~d~~~g~~~~lt~~~ 81 (595)
..|++.|+. +++.. .|. .+.... ..+||||++|+........ .+ +....|.++|+++++...-....
T Consensus 59 ~~V~ViD~~----t~~v~~~I~---vG~~P~-va~spDG~~lyVan~~~~r~~~G--~~~~~VsviD~~t~~v~~~I~v~ 128 (386)
T 3sjl_D 59 TQQFVIDGE----AGRVIGMID---GGFLPN-PVVADDGSFIAHASTVFSRIARG--ERTDYVEVFDPVTLLPTADIELP 128 (386)
T ss_dssp EEEEEEETT----TTEEEEEEE---ECSSCE-EEECTTSSCEEEEEEEEEETTEE--EEEEEEEEECTTTCCEEEEEEET
T ss_pred CEEEEEECC----CCeEEEEEE---CCCCCc-EEECCCCCEEEEEcccccccccC--CCCCEEEEEECCCCeEEEEEECC
Confidence 356777776 45443 332 233344 9999999987665421000 00 12356999999998754322111
Q ss_pred C---ccccccccceEEecCCcEEEEE
Q 007620 82 D---ICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 82 ~---~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
. .........+.++|||++|++.
T Consensus 129 ~g~r~~~g~~P~~~a~spDGk~lyVa 154 (386)
T 3sjl_D 129 DAPRFLVGTYPWMTSLTPDGKTLLFY 154 (386)
T ss_dssp TCCCCCBSCCGGGEEECTTSSEEEEE
T ss_pred CccccccCCCCceEEEcCCCCEEEEE
Confidence 1 0001123478999999998885
No 161
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.32 E-value=0.00019 Score=77.43 Aligned_cols=222 Identities=12% Similarity=0.040 Sum_probs=124.7
Q ss_pred eeEEEecCCCCCCC-----CceeeecCCCCCc-ccceEEcc--CCCEEEEEEecccccccCCCceEEEEEECCCC-----
Q 007620 6 GIGIHRLLPDDSLG-----PEKEVHGYPDGAK-INFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----- 72 (595)
Q Consensus 6 ~~~~~~~~~~~~~g-----~~~~lt~~~~~~~-~~~~~~SP--DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g----- 72 (595)
.|.|+|+. ++ ..+.+.. .... +....||| ||++||.... + ..|.++++.++
T Consensus 40 ~v~v~~~~----~~~~~~~~~~~~~~--h~~~~v~~~~~sp~~~~~~l~s~~~--------d--g~v~vw~~~~~~~~~~ 103 (615)
T 1pgu_A 40 SAFVRCLD----DGDSKVPPVVQFTG--HGSSVVTTVKFSPIKGSQYLCSGDE--------S--GKVIVWGWTFDKESNS 103 (615)
T ss_dssp EEEEEECC----SSCCSSCSEEEECT--TTTSCEEEEEECSSTTCCEEEEEET--------T--SEEEEEEEEEEGGGTE
T ss_pred eEEEEECC----CCCCccccceEEec--CCCceEEEEEECcCCCCCEEEEecC--------C--CEEEEEeCCCCccccc
Confidence 57888987 44 3444442 2235 78999999 9998887653 2 34555566544
Q ss_pred -ceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccce
Q 007620 73 -EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLF 151 (595)
Q Consensus 73 -~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 151 (595)
+...+..... ....+..+.|+|||+.|+....+..
T Consensus 104 ~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~------------------------------------------ 139 (615)
T 1pgu_A 104 VEVNVKSEFQV--LAGPISDISWDFEGRRLCVVGEGRD------------------------------------------ 139 (615)
T ss_dssp EEEEEEEEEEC--CSSCEEEEEECTTSSEEEEEECCSS------------------------------------------
T ss_pred ccccccchhhc--ccccEEEEEEeCCCCEEEEeccCCC------------------------------------------
Confidence 2222211110 0125678999999999887632100
Q ss_pred EEeecceEEEEcCCCCeeecCC-CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCC
Q 007620 152 DYYTTAQLVLGSLDGTAKDFGT-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPP 229 (595)
Q Consensus 152 ~~~~~~~l~~~d~~g~~~~lt~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~ 229 (595)
....|++++.......+.. ...+..+.|+|+++.++++.... ..+.+||+.+++. ..+.....
T Consensus 140 ---~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------------~~v~vwd~~~~~~~~~~~~~~~ 204 (615)
T 1pgu_A 140 ---NFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD------------GSVVFYQGPPFKFSASDRTHHK 204 (615)
T ss_dssp ---CSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETT------------TEEEEEETTTBEEEEEECSSSC
T ss_pred ---CccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCC------------CcEEEEeCCCcceeeeecccCC
Confidence 0123444552222333322 23566899999998555554332 3788999876654 33322110
Q ss_pred CccCCccccccccCCCCceeecC-CCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCcee-c-c---ccCccccc
Q 007620 230 AEDIPVCYNSVREGMRSISWRAD-KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-L-H---KLDLRFRS 303 (595)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspd-g~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~-l-~---~~~~~~~~ 303 (595)
. . .....+.|+|+ ++. |+.. .....+.++++ ..++... + . .....+..
T Consensus 205 ~-~---------~~v~~~~~~~~~~~~-l~~~------------~~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~v~~ 258 (615)
T 1pgu_A 205 Q-G---------SFVRDVEFSPDSGEF-VITV------------GSDRKISCFDG---KSGEFLKYIEDDQEPVQGGIFA 258 (615)
T ss_dssp T-T---------CCEEEEEECSTTCCE-EEEE------------ETTCCEEEEET---TTCCEEEECCBTTBCCCSCEEE
T ss_pred C-C---------ceEEEEEECCCCCCE-EEEE------------eCCCeEEEEEC---CCCCEeEEecccccccCCceEE
Confidence 0 0 01345889999 773 3332 11235677775 3334333 3 2 33455778
Q ss_pred eeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 304 VSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 304 ~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
+.|+ ++..++.... ++ .|.++|+.+
T Consensus 259 ~~~~-~~~~l~~~~~--d~--~i~~wd~~~ 283 (615)
T 1pgu_A 259 LSWL-DSQKFATVGA--DA--TIRVWDVTT 283 (615)
T ss_dssp EEES-SSSEEEEEET--TS--EEEEEETTT
T ss_pred EEEc-CCCEEEEEcC--CC--cEEEEECCC
Confidence 8999 8887766541 23 577778876
No 162
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.32 E-value=0.00045 Score=68.16 Aligned_cols=230 Identities=12% Similarity=0.032 Sum_probs=119.2
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....|||||+.|+-... ...|.+.+...+........... ......|+++++.|+....+
T Consensus 88 ~V~~~~~s~dg~~l~s~~~----------d~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~s~s~d---- 149 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGSW----------DGTLRLWDLTTGTTTRRFVGHTK----DVLSVAFSSDNRQIVSGSRD---- 149 (340)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSS----CEEEEEECTTSSCEEEEETT----
T ss_pred CEEEEEECCCCCEEEEEcc----------cccceEEeecccceeeeecCCCC----ceeEEEEeecCccceeecCC----
Confidence 5888999999998876542 24577778776654444322221 34466788888877664211
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCC-eeec--C-CCCeeeeeEECCCCC
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDF--G-TPAVYTAVEPSPDQK 187 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~l--t-~~~~~~~~~~SpDg~ 187 (595)
..+.++++.+. ...+ . .......+.|++++.
T Consensus 150 ---------------------------------------------~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 184 (340)
T 4aow_A 150 ---------------------------------------------KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 184 (340)
T ss_dssp ---------------------------------------------SCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSS
T ss_pred ---------------------------------------------CeEEEEEeCCCceEEEEeccccCcccceEEccCCC
Confidence 12223333221 1111 1 122345678888875
Q ss_pred eEEEEEcccCccccccCcccceeEEEEcCCCceEEE-eccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCC
Q 007620 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (595)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (595)
..++.+... ...+.+||+.+++... +.... .....+.|+||++. |+..
T Consensus 185 ~~~~~s~~~-----------d~~i~i~d~~~~~~~~~~~~h~-------------~~v~~~~~s~~~~~-l~s~------ 233 (340)
T 4aow_A 185 NPIIVSCGW-----------DKLVKVWNLANCKLKTNHIGHT-------------GYLNTVTVSPDGSL-CASG------ 233 (340)
T ss_dssp SCEEEEEET-----------TSCEEEEETTTTEEEEEECCCS-------------SCEEEEEECTTSSE-EEEE------
T ss_pred CcEEEEEcC-----------CCEEEEEECCCCceeeEecCCC-------------CcEEEEEECCCCCE-EEEE------
Confidence 443332221 2368889988665433 22111 11345789999873 3221
Q ss_pred CcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeeccc
Q 007620 267 DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 346 (595)
Q Consensus 267 ~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~ 346 (595)
.....+.++|. ..++..........+..+.|+|++..++... ++ .|.++|+.++ ..........
T Consensus 234 ------s~Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---d~--~i~iwd~~~~--~~~~~~~~~~ 297 (340)
T 4aow_A 234 ------GKDGQAMLWDL---NEGKHLYTLDGGDIINALCFSPNRYWLCAAT---GP--SIKIWDLEGK--IIVDELKQEV 297 (340)
T ss_dssp ------ETTCEEEEEET---TTTEEEEEEECSSCEEEEEECSSSSEEEEEE---TT--EEEEEETTTT--EEEEEECCC-
T ss_pred ------eCCCeEEEEEe---ccCceeeeecCCceEEeeecCCCCceeeccC---CC--EEEEEECCCC--eEEEeccccc
Confidence 11235677776 3222222223334566788999987655442 23 5677787763 1111111110
Q ss_pred c-cccC-CC-CCCCeeeCCCCCEEEEEe
Q 007620 347 E-NVYS-DP-GSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 347 ~-~~~~-~~-~~~~~~~~~dg~~l~~~~ 371 (595)
. .... .+ ....+.|+|||+.|+...
T Consensus 298 ~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 298 ISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp ------CCCCCEEEEEECTTSSEEEEEE
T ss_pred eeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 0 0000 00 011278999999876554
No 163
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.29 E-value=0.00034 Score=68.31 Aligned_cols=249 Identities=12% Similarity=0.081 Sum_probs=130.8
Q ss_pred eeEEEecCCCCCCCCceeeecCCC-CCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~-~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.|.|.|+. +|+..++..+.. ...+....|+|||++||-.+. ...|.++++.+++..+......
T Consensus 46 tV~iWd~~----tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~----------Dg~v~iw~~~~~~~~~~~~~h~-- 109 (318)
T 4ggc_A 46 SVYLWSAS----SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS----------SAEVQLWDVQQQKRLRNMTSHS-- 109 (318)
T ss_dssp EEEEEETT----TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCS--
T ss_pred EEEEEECC----CCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC----------CCcEEEeecCCceeEEEecCcc--
Confidence 47889998 777665543332 235788999999998876542 2456777998887544432211
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC
Q 007620 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 164 (595)
.....++++++.|+..... + .+...+.
T Consensus 110 ----~~~~~~~~~~~~l~s~~~~----------------------~---------------------------~~~~~~~ 136 (318)
T 4ggc_A 110 ----ARVGSLSWNSYILSSGSRS----------------------G---------------------------HIHHHDV 136 (318)
T ss_dssp ----SCEEEEEEETTEEEEEETT----------------------S---------------------------EEEEEET
T ss_pred ----ceEEEeecCCCEEEEEecC----------------------C---------------------------ceEeeec
Confidence 1234566677766554211 0 1111111
Q ss_pred -CC-C-eeec-CCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEE--eccCCCCccCCcccc
Q 007620 165 -DG-T-AKDF-GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE--LCDLPPAEDIPVCYN 238 (595)
Q Consensus 165 -~g-~-~~~l-t~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~--l~~~~~~~~~~~~~~ 238 (595)
.+ . ...+ ..........++++|+.|+....+ ..+.+||+.+++... +.....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~--------- 194 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------NLVNVWPSAPGEGGWVPLQTFTQ--------- 194 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESSCBTTBSCCSEEECC---------
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC-------------cceeEEECCCCcccccceeeecc---------
Confidence 11 1 1111 122334578899999988766542 368888987543211 000000
Q ss_pred ccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEe
Q 007620 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETW 318 (595)
Q Consensus 239 ~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~ 318 (595)
.........++|++...+... . . .....+.+++. ...................|++++..++....
T Consensus 195 -~~~~v~~~~~~~~~~~~~~~~-~-~--------~~~~~i~lwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 195 -HQGAVKAVAWCPWQSNVLATG-G-G--------TSDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp -CCSCEEEEEECTTSTTEEEEE-E-C--------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEEETTTTEEEEEEC
T ss_pred -cCCceEEEEecCCCCcEEEEE-e-c--------CCCCEEEEEec---ccccccccccceeeeeeeeecccccceEEEEE
Confidence 000122456777766433222 1 1 11234555564 22233333333445667889999887665443
Q ss_pred ecccceEEEEEeCCCCCCCcEEEee--cccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 319 YKTSQTRTWLVCPGSKDVAPRVLFD--RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 319 ~~~~~~~L~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
..++ .|.++|+.+++ ....+.. ..+.. +.|+|||+.|+...
T Consensus 261 ~~d~--~i~iwd~~~~~-~~~~l~gH~~~V~~---------l~~spdg~~l~S~s 303 (318)
T 4ggc_A 261 FAQN--QLVIWKYPTMA-KVAELKGHTSRVLS---------LTMSPDGATVASAA 303 (318)
T ss_dssp TTTC--CEEEEETTTCC-EEEEECCCSSCEEE---------EEECTTSSCEEEEE
T ss_pred cCCC--EEEEEECCCCc-EEEEEcCCCCCEEE---------EEEcCCCCEEEEEe
Confidence 2233 57777887741 2222222 22333 78999999876544
No 164
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.29 E-value=0.00015 Score=70.69 Aligned_cols=58 Identities=19% Similarity=0.136 Sum_probs=35.9
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc---eEecccCCCccccccccceEEecC--CcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFESPDICLNAVFGSFVWVNN--STLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~---~~~lt~~~~~~~~~~~~~~~Wspd--g~~l~~~ 104 (595)
.+...+|||||++||-.+. ++. |.++++.++. ...+..... .+..+.|+++ |+.|+-.
T Consensus 11 ~V~~~~~s~~g~~las~s~--------D~~--v~iw~~~~~~~~~~~~l~gH~~-----~V~~v~~s~~~~g~~l~s~ 73 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSS--------DKT--IKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASC 73 (297)
T ss_dssp CEEEEEECTTSSEEEEEET--------TSC--EEEEEBCSSCBCCCEEECCCSS-----CEEEEEECCGGGCSEEEEE
T ss_pred ceEEEEECCCCCEEEEEeC--------CCE--EEEEecCCCCcEEEEEEccccC-----CeEEEEecCCCcCCEEEEE
Confidence 4778899999999876553 333 4455665432 233332222 4678899864 7766654
No 165
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.28 E-value=0.00023 Score=70.20 Aligned_cols=58 Identities=7% Similarity=0.084 Sum_probs=37.4
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc--eEec---ccCCCccccccccceEEec--CCcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE--AKPL---FESPDICLNAVFGSFVWVN--NSTLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~--~~~l---t~~~~~~~~~~~~~~~Wsp--dg~~l~~~ 104 (595)
.+....|||||++||.... + ..|.++++.++. .+.+ ..... .+..+.|+| |++.|+..
T Consensus 13 ~v~~~~~~~~~~~l~~~~~--------d--g~i~iw~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSS--------D--QHIKVFKLDKDTSNWELSDSWRAHDS-----SIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp CEEEEEECSSSSEEEEEET--------T--SEEEEEEECSSSCCEEEEEEEECCSS-----CEEEEEECCGGGCSEEEEE
T ss_pred ceeEEEEcCCCCEEEEeeC--------C--CeEEEEECCCCCCcceecceeccCCC-----cEEEEEEcCCCCCCEEEEE
Confidence 5888999999998876542 2 345555666542 1222 22222 567899998 68877765
No 166
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.28 E-value=0.001 Score=64.52 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=40.5
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
.+....| |||++||.... ...|.++++.+++......... ..+..+.|+|+++.|+..
T Consensus 20 ~v~~~~~-~~~~~l~s~~~----------dg~v~vw~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~ 77 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSR----------DGTVRLWSKDDQWLGTVVYTGQ----GFLNSVCYDSEKELLLFG 77 (313)
T ss_dssp CEEEEEE-EETTEEEEEET----------TSEEEEEEESSSEEEEEEEECS----SCEEEEEEETTTTEEEEE
T ss_pred CcEEEEe-cCCCEEEEEEc----------CCcEEEEECCCCEEEEEeecCC----ccEEEEEECCCCCEEEEe
Confidence 5778899 99998776542 2467777887776544433222 156789999999988875
No 167
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.27 E-value=0.00028 Score=69.84 Aligned_cols=233 Identities=12% Similarity=0.028 Sum_probs=124.7
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|++.|+. +++.+.+.. .....+....|+|||+.++...... .....|+++++++++.+.+......
T Consensus 67 ~i~~~d~~----~~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~------~~~~~i~~~d~~~~~~~~~~~~~~~-- 133 (333)
T 2dg1_A 67 NIFKINPE----TKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDF------KSTGGIFAATENGDNLQDIIEDLST-- 133 (333)
T ss_dssp EEEEECTT----TCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTS------SSCCEEEEECTTSCSCEEEECSSSS--
T ss_pred EEEEEeCC----CCcEEEEee-CCCCCcceEEECCCCcEEEEeCCCC------CCCceEEEEeCCCCEEEEEEccCcc--
Confidence 46777765 677766652 2223577889999997443322110 1125899999998876643221110
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC
Q 007620 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 165 (595)
...+..+.++|+|+.++.. .... . .+ ....||+++.+
T Consensus 134 ~~~~~~i~~d~~g~l~v~~-~~~~--------------------~---------------~~-------~~~~l~~~~~~ 170 (333)
T 2dg1_A 134 AYCIDDMVFDSKGGFYFTD-FRGY--------------------S---------------TN-------PLGGVYYVSPD 170 (333)
T ss_dssp CCCEEEEEECTTSCEEEEE-CCCB--------------------T---------------TB-------CCEEEEEECTT
T ss_pred CCcccceEECCCCCEEEEe-cccc--------------------c---------------cC-------CCceEEEEeCC
Confidence 1134578899999744332 1000 0 00 13468888885
Q ss_pred C-CeeecCCC-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC--CceEEEe-----ccCCCCccCCcc
Q 007620 166 G-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GKLVREL-----CDLPPAEDIPVC 236 (595)
Q Consensus 166 g-~~~~lt~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~--g~~~~~l-----~~~~~~~~~~~~ 236 (595)
+ +.+.+... .....++|+|||+.|+++.... ..|+++|+. ++....+ ...+..
T Consensus 171 ~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~------------~~i~~~d~~~~g~~~~~~~~~~~~~~~~~------ 232 (333)
T 2dg1_A 171 FRTVTPIIQNISVANGIALSTDEKVLWVTETTA------------NRLHRIALEDDGVTIQPFGATIPYYFTGH------ 232 (333)
T ss_dssp SCCEEEEEEEESSEEEEEECTTSSEEEEEEGGG------------TEEEEEEECTTSSSEEEEEEEEEEECCSS------
T ss_pred CCEEEEeecCCCcccceEECCCCCEEEEEeCCC------------CeEEEEEecCCCcCcccccceEEEecCCC------
Confidence 4 55554322 2345789999999988875422 368888874 3332221 111000
Q ss_pred ccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCc------cccceeecCCC
Q 007620 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL------RFRSVSWCDDS 310 (595)
Q Consensus 237 ~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~------~~~~~~wspDg 310 (595)
..+..+.+.++|. ++.. .. ....+++++. ++.....+..... ....+.|+||+
T Consensus 233 -----~~~~~i~~d~~G~--l~v~-~~----------~~~~v~~~d~---~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg 291 (333)
T 2dg1_A 233 -----EGPDSCCIDSDDN--LYVA-MY----------GQGRVLVFNK---RGYPIGQILIPGRDEGHMLRSTHPQFIPGT 291 (333)
T ss_dssp -----SEEEEEEEBTTCC--EEEE-EE----------TTTEEEEECT---TSCEEEEEECTTGGGTCSCBCCEEEECTTS
T ss_pred -----CCCCceEECCCCC--EEEE-Ec----------CCCEEEEECC---CCCEEEEEEcCCCccccccCcceEEECCCC
Confidence 0122466677775 4332 11 1235666674 4322223321111 35678899998
Q ss_pred cEEEEEEeec--ccceEEEEEeCCC
Q 007620 311 LALVNETWYK--TSQTRTWLVCPGS 333 (595)
Q Consensus 311 ~~l~~~~~~~--~~~~~L~~~d~~~ 333 (595)
..|+...... .....||.+++..
T Consensus 292 ~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 292 NQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp CEEEEEEECGGGTCCEEEEEEECSS
T ss_pred CEEEEEeCccCCCCCceEEEEeccc
Confidence 6554433221 1234788888765
No 168
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.23 E-value=0.0001 Score=73.22 Aligned_cols=137 Identities=12% Similarity=0.018 Sum_probs=83.6
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|+..|.. +++.+.++ ++. .+....|+|||+.++.. . ..|+++++++|+.+.+........
T Consensus 72 ~i~~~d~~----~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~--~----------~gl~~~d~~~g~~~~~~~~~~~~~ 132 (326)
T 2ghs_A 72 ELHELHLA----SGRKTVHA-LPF--MGSALAKISDSKQLIAS--D----------DGLFLRDTATGVLTLHAELESDLP 132 (326)
T ss_dssp EEEEEETT----TTEEEEEE-CSS--CEEEEEEEETTEEEEEE--T----------TEEEEEETTTCCEEEEECSSTTCT
T ss_pred EEEEEECC----CCcEEEEE-CCC--cceEEEEeCCCeEEEEE--C----------CCEEEEECCCCcEEEEeeCCCCCC
Confidence 46777776 56555554 332 47788999999755432 1 349999999998777754321110
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC
Q 007620 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 165 (595)
...+..+.++|+|+. ++...... .+. ....||+++ +
T Consensus 133 ~~~~~~i~~d~~G~l-~v~~~~~~------------------------------------~~~------~~~~l~~~~-~ 168 (326)
T 2ghs_A 133 GNRSNDGRMHPSGAL-WIGTMGRK------------------------------------AET------GAGSIYHVA-K 168 (326)
T ss_dssp TEEEEEEEECTTSCE-EEEEEETT------------------------------------CCT------TCEEEEEEE-T
T ss_pred CCCCCCEEECCCCCE-EEEeCCCc------------------------------------CCC------CceEEEEEe-C
Confidence 112457889999984 44311000 000 134678888 6
Q ss_pred CCeeecCCC-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC
Q 007620 166 GTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (595)
Q Consensus 166 g~~~~lt~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (595)
|+.+.+... .....++|||||+.|+++... ...|++++++
T Consensus 169 g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~------------~~~I~~~d~~ 209 (326)
T 2ghs_A 169 GKVTKLFADISIPNSICFSPDGTTGYFVDTK------------VNRLMRVPLD 209 (326)
T ss_dssp TEEEEEEEEESSEEEEEECTTSCEEEEEETT------------TCEEEEEEBC
T ss_pred CcEEEeeCCCcccCCeEEcCCCCEEEEEECC------------CCEEEEEEcc
Confidence 765554322 233578999999999887532 2378888875
No 169
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.22 E-value=0.00059 Score=66.35 Aligned_cols=231 Identities=9% Similarity=0.052 Sum_probs=122.2
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc----eEecccCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFESP 81 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~----~~~lt~~~ 81 (595)
.|.++|+. +++...... .....+....|+|||+.|+.... + ..|.++++.... ...+....
T Consensus 40 ~v~vw~~~----~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--------d--g~i~~~~~~~~~~~~~~~~~~~~~ 104 (313)
T 3odt_A 40 TVRLWSKD----DQWLGTVVY-TGQGFLNSVCYDSEKELLLFGGK--------D--TMINGVPLFATSGEDPLYTLIGHQ 104 (313)
T ss_dssp EEEEEEES----SSEEEEEEE-ECSSCEEEEEEETTTTEEEEEET--------T--SCEEEEETTCCTTSCC-CEECCCS
T ss_pred cEEEEECC----CCEEEEEee-cCCccEEEEEECCCCCEEEEecC--------C--CeEEEEEeeecCCCCcccchhhcc
Confidence 47788886 554433332 22336889999999998887653 2 345555665432 22221111
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEE
Q 007620 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (595)
Q Consensus 82 ~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (595)
. .+..+.| +++.|+....+ ..|.+
T Consensus 105 ~-----~i~~~~~--~~~~l~~~~~d-------------------------------------------------~~i~~ 128 (313)
T 3odt_A 105 G-----NVCSLSF--QDGVVISGSWD-------------------------------------------------KTAKV 128 (313)
T ss_dssp S-----CEEEEEE--ETTEEEEEETT-------------------------------------------------SEEEE
T ss_pred c-----CEEEEEe--cCCEEEEEeCC-------------------------------------------------CCEEE
Confidence 1 3556777 56655554211 12233
Q ss_pred EcCCCC-eeecC-CCCeeeeeEECC-CCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccc
Q 007620 162 GSLDGT-AKDFG-TPAVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (595)
Q Consensus 162 ~d~~g~-~~~lt-~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~ 238 (595)
++ .++ ...+. .......+.|+| +++.|+..... ..+.+||.. .....+....
T Consensus 129 ~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~-~~~~~~~~~~---------- 183 (313)
T 3odt_A 129 WK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASAD-------------KTIKLWQND-KVIKTFSGIH---------- 183 (313)
T ss_dssp EE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETT-------------SCEEEEETT-EEEEEECSSC----------
T ss_pred Ec-CCcEEEecccCCCceeEEEEccCCCCEEEEEECC-------------CCEEEEecC-ceEEEEeccC----------
Confidence 33 221 11221 223345677877 88888776542 367888833 2223322100
Q ss_pred ccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEE
Q 007620 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNET 317 (595)
Q Consensus 239 ~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~ 317 (595)
......+.|+|++. ++.. .....+.+++. ..++.. .+......+..+.|+|++. ++...
T Consensus 184 --~~~i~~~~~~~~~~--~~~~------------~~dg~i~i~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~ 243 (313)
T 3odt_A 184 --NDVVRHLAVVDDGH--FISC------------SNDGLIKLVDM---HTGDVLRTYEGHESFVYCIKLLPNGD-IVSCG 243 (313)
T ss_dssp --SSCEEEEEEEETTE--EEEE------------ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECTTSC-EEEEE
T ss_pred --cccEEEEEEcCCCe--EEEc------------cCCCeEEEEEC---CchhhhhhhhcCCceEEEEEEecCCC-EEEEe
Confidence 01123578888876 3322 12346777776 323333 3333455677899999995 44432
Q ss_pred eecccceEEEEEeCCCCCCCcEEEeec---ccccccCCCCCCCeeeCCCCCEE
Q 007620 318 WYKTSQTRTWLVCPGSKDVAPRVLFDR---VFENVYSDPGSPMMTRTSTGTNV 367 (595)
Q Consensus 318 ~~~~~~~~L~~~d~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~dg~~l 367 (595)
.++ .|.++|+.++ +....+.. .+.. +.|+++|+.+
T Consensus 244 --~dg--~v~iwd~~~~--~~~~~~~~~~~~i~~---------~~~~~~~~~~ 281 (313)
T 3odt_A 244 --EDR--TVRIWSKENG--SLKQVITLPAISIWS---------VDCMSNGDII 281 (313)
T ss_dssp --TTS--EEEEECTTTC--CEEEEEECSSSCEEE---------EEECTTSCEE
T ss_pred --cCC--EEEEEECCCC--ceeEEEeccCceEEE---------EEEccCCCEE
Confidence 223 6888898774 33222221 2222 7899999843
No 170
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.21 E-value=0.00013 Score=71.99 Aligned_cols=58 Identities=19% Similarity=0.145 Sum_probs=36.4
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEe---cccCCCccccccccceEEec--CCcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP---LFESPDICLNAVFGSFVWVN--NSTLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~---lt~~~~~~~~~~~~~~~Wsp--dg~~l~~~ 104 (595)
.+...+|||||++||-.+. + ..|.++|+.+++... +..... .+..+.|++ +++.|+-.
T Consensus 15 ~V~~v~~s~~g~~lasgs~--------D--~~v~lwd~~~~~~~~~~~l~gH~~-----~V~~v~~~~~~~~~~l~s~ 77 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSS--------D--RSVKIFDVRNGGQILIADLRGHEG-----PVWQVAWAHPMYGNILASC 77 (316)
T ss_dssp CEEEEEECGGGCEEEEEET--------T--TEEEEEEEETTEEEEEEEEECCSS-----CEEEEEECCGGGSSCEEEE
T ss_pred eEEEeeEcCCCCEEEEEeC--------C--CeEEEEEecCCCcEEEEEEcCCCc-----cEEEEEeCCCCCCCEEEEE
Confidence 5778999999998876542 3 345555766664322 322222 467889986 47766654
No 171
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.20 E-value=0.00072 Score=66.18 Aligned_cols=183 Identities=9% Similarity=0.055 Sum_probs=97.8
Q ss_pred CCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCcc
Q 007620 70 ETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDES 149 (595)
Q Consensus 70 ~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 149 (595)
.+.+.++|+.... ....+.|+|+|+.|+|+...
T Consensus 33 ~~~~~~~l~~~~~-----~~egp~~~~~g~~l~~~d~~------------------------------------------ 65 (305)
T 3dr2_A 33 GDARLLTLYDQAT-----WSEGPAWWEAQRTLVWSDLV------------------------------------------ 65 (305)
T ss_dssp TTCCCEEEECCCS-----SEEEEEEEGGGTEEEEEETT------------------------------------------
T ss_pred CCCceEEEecCCc-----CccCCeEeCCCCEEEEEECC------------------------------------------
Confidence 3456666754332 23589999999988886210
Q ss_pred ceEEeecceEEEEcCCCCeeecCCC-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCC
Q 007620 150 LFDYYTTAQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP 228 (595)
Q Consensus 150 ~~~~~~~~~l~~~d~~g~~~~lt~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~ 228 (595)
...|++++.+|+.+.+... .....+.++|||+. ++.... ...|++++.+ ++.+.+....
T Consensus 66 ------~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l-~v~~~~------------~~~v~~~~~~-g~~~~~~~~~ 125 (305)
T 3dr2_A 66 ------GRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRL-VHCEHG------------RRAITRSDAD-GQAHLLVGRY 125 (305)
T ss_dssp ------TTEEEEEETTSCEEEEEESCSCEEEEEECTTSCE-EEEETT------------TTEEEEECTT-SCEEEEECEE
T ss_pred ------CCEEEEEeCCCCEEEEeCCCCccceeeECCCCCE-EEEECC------------CCEEEEECCC-CCEEEEEecc
Confidence 1345666666655444322 34457899999984 444321 1368888887 4444443211
Q ss_pred CCccCCccccccccCCCCceeecCCCeeEEEEEee-c-----CCCcccccCCcceEEeccCCCCCCCCceeccccCcccc
Q 007620 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ-D-----RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFR 302 (595)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~-d-----~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~ 302 (595)
. ..+ ......+.+.+||. +++.... . .+...........++.++. ++++.+.+. ......
T Consensus 126 ~--~~~------~~~~~~i~~d~dG~--l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~---~~g~~~~~~-~~~~p~ 191 (305)
T 3dr2_A 126 A--GKR------LNSPNDLIVARDGA--IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP---DGSPLQRMA-DLDHPN 191 (305)
T ss_dssp T--TEE------CSCCCCEEECTTSC--EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS---SSCCCEEEE-EESSEE
T ss_pred C--CCc------cCCCCCEEECCCCC--EEEeCcCCCccccccccccccccCCCeEEEEcC---CCCcEEEEe-cCCCCc
Confidence 0 000 01123577888886 5542100 0 0000000011246777774 445666554 223345
Q ss_pred ceeecCCCcEEEEEEeec--ccceEEEEEeCCC
Q 007620 303 SVSWCDDSLALVNETWYK--TSQTRTWLVCPGS 333 (595)
Q Consensus 303 ~~~wspDg~~l~~~~~~~--~~~~~L~~~d~~~ 333 (595)
.+.|+|||+.|+...... .....|+++++++
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 678999998655443211 0124799998876
No 172
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.16 E-value=0.0004 Score=70.39 Aligned_cols=78 Identities=13% Similarity=0.207 Sum_probs=49.2
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCC---EEEEEEecccccccCCCceEEEEEECCCCceEeccc-CC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGK---RIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE-SP 81 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~---~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~-~~ 81 (595)
.|.+.|+. +++......+. .......|+|++. .|+.... ...|.++++.+++...... ..
T Consensus 123 ~i~iwd~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----------~~~v~~~d~~~~~~~~~~~~~~ 186 (408)
T 4a11_B 123 TLKVWDTN----TLQTADVFNFE--ETVYSHHMSPVSTKHCLVAVGTR----------GPKVQLCDLKSGSCSHILQGHR 186 (408)
T ss_dssp EEEEEETT----TTEEEEEEECS--SCEEEEEECSSCSSCCEEEEEES----------SSSEEEEESSSSCCCEEECCCC
T ss_pred eEEEeeCC----CCccceeccCC--CceeeeEeecCCCCCcEEEEEcC----------CCeEEEEeCCCcceeeeecCCC
Confidence 47788887 56555554333 2477888998544 6655432 3567788988776433322 22
Q ss_pred CccccccccceEEecCCcEEEEE
Q 007620 82 DICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 82 ~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
. .+..+.|+|+++.|+++
T Consensus 187 ~-----~v~~~~~~~~~~~ll~~ 204 (408)
T 4a11_B 187 Q-----EILAVSWSPRYDYILAT 204 (408)
T ss_dssp S-----CEEEEEECSSCTTEEEE
T ss_pred C-----cEEEEEECCCCCcEEEE
Confidence 2 56789999999964443
No 173
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.16 E-value=0.00024 Score=71.26 Aligned_cols=221 Identities=14% Similarity=0.171 Sum_probs=117.0
Q ss_pred eeEEEecCCCCCCCCceeeecCC-CCCcccceEEccC--CCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYP-DGAKINFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~-~~~~~~~~~~SPD--G~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~ 82 (595)
.|.|+|+. .+..+.+..+. ....+....|+|+ |+.|+.... + ..|.++++.+++...+.....
T Consensus 34 ~i~iw~~~----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~--------d--g~v~iwd~~~~~~~~~~~~~~ 99 (379)
T 3jrp_A 34 TIKIFEVE----GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY--------D--GKVLIWKEENGRWSQIAVHAV 99 (379)
T ss_dssp CEEEEEEE----TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--------T--SCEEEEEEETTEEEEEEEECC
T ss_pred cEEEEecC----CCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc--------C--CEEEEEEcCCCceeEeeeecC
Confidence 47788886 33333322222 2235788999988 887766542 2 446666777775322211111
Q ss_pred ccccccccceEEecC--CcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEE
Q 007620 83 ICLNAVFGSFVWVNN--STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (595)
Q Consensus 83 ~~~~~~~~~~~Wspd--g~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (595)
....+..+.|+|+ ++.|+....+ ..|.
T Consensus 100 --~~~~v~~~~~~~~~~~~~l~~~~~d-------------------------------------------------~~i~ 128 (379)
T 3jrp_A 100 --HSASVNSVQWAPHEYGPLLLVASSD-------------------------------------------------GKVS 128 (379)
T ss_dssp --CSSCEEEEEECCGGGCSEEEEEETT-------------------------------------------------SEEE
T ss_pred --CCcceEEEEeCCCCCCCEEEEecCC-------------------------------------------------CcEE
Confidence 0115678999999 8877775211 2344
Q ss_pred EEcC-CCC---eeec-CCCCeeeeeEECC-------------CCCeEEEEEcccCccccccCcccceeEEEEcCCCce--
Q 007620 161 LGSL-DGT---AKDF-GTPAVYTAVEPSP-------------DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-- 220 (595)
Q Consensus 161 ~~d~-~g~---~~~l-t~~~~~~~~~~Sp-------------Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-- 220 (595)
++++ .+. ...+ ........+.|+| |++.|+....+ ..|.+||+.++.
T Consensus 129 v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 129 VVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-------------NLVKIWKYNSDAQT 195 (379)
T ss_dssp EEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETT-------------SCEEEEEEETTTTE
T ss_pred EEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC-------------CeEEEEEecCCCcc
Confidence 4444 221 1122 1223456788999 68888777542 368888876432
Q ss_pred EEEeccCCCCccCCccccccccCCCCceeecCC--CeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCC---ceecc
Q 007620 221 VRELCDLPPAEDIPVCYNSVREGMRSISWRADK--PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILH 295 (595)
Q Consensus 221 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg--~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~---~~~l~ 295 (595)
...+..... .......+.|+|++ ...|+.. . ....+.+|++ ..+. ...+.
T Consensus 196 ~~~~~~~~~----------h~~~v~~~~~sp~~~~~~~l~s~-~-----------~dg~i~iwd~---~~~~~~~~~~~~ 250 (379)
T 3jrp_A 196 YVLESTLEG----------HSDWVRDVAWSPTVLLRSYLASV-S-----------QDRTCIIWTQ---DNEQGPWKKTLL 250 (379)
T ss_dssp EEEEEEECC----------CSSCEEEEEECCCCSSSEEEEEE-E-----------TTSCEEEEEE---SSTTSCCEEEES
T ss_pred eeeEEEEec----------ccCcEeEEEECCCCCCCCeEEEE-e-----------CCCEEEEEeC---CCCCccceeeee
Confidence 122211110 01113468899993 2223332 1 1234666665 2222 11222
Q ss_pred c---cCccccceeecCCCcEEEEEEeecccceEEEEEeC
Q 007620 296 K---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (595)
Q Consensus 296 ~---~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~ 331 (595)
. ....+..+.|+|||..|+.... ++..++|.++.
T Consensus 251 ~~~~~~~~v~~~~~s~~g~~l~~~~~--dg~i~iw~~~~ 287 (379)
T 3jrp_A 251 KEEKFPDVLWRASWSLSGNVLALSGG--DNKVTLWKENL 287 (379)
T ss_dssp SSSCCSSCEEEEEECSSSCCEEEEES--SSSEEEEEEEE
T ss_pred ccccCCCcEEEEEEcCCCCEEEEecC--CCcEEEEeCCC
Confidence 1 3345678899999998776542 35456666554
No 174
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.15 E-value=0.00076 Score=67.16 Aligned_cols=79 Identities=13% Similarity=0.167 Sum_probs=54.9
Q ss_pred eeEEEecCCCCCCCCce--eeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc
Q 007620 6 GIGIHRLLPDDSLGPEK--EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~--~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~ 83 (595)
.|.|+|+.. .+... .+.. ....+....|+|||+.|+.... ...|.++++.+++...+.....
T Consensus 65 ~i~iw~~~~---~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~- 128 (368)
T 3mmy_A 65 DVRCWEVQD---SGQTIPKAQQM--HTGPVLDVCWSDDGSKVFTASC----------DKTAKMWDLSSNQAIQIAQHDA- 128 (368)
T ss_dssp EEEEEEECT---TSCEEEEEEEE--CSSCEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECSS-
T ss_pred cEEEEEcCC---CCceeEEEecc--ccCCEEEEEECcCCCEEEEEcC----------CCcEEEEEcCCCCceeeccccC-
Confidence 478888872 24442 3432 2335889999999999886542 2567778999888777654433
Q ss_pred cccccccceEE--ecCCcEEEEE
Q 007620 84 CLNAVFGSFVW--VNNSTLLIFT 104 (595)
Q Consensus 84 ~~~~~~~~~~W--spdg~~l~~~ 104 (595)
.+..+.| +|+++.|+..
T Consensus 129 ----~v~~~~~~~~~~~~~l~~~ 147 (368)
T 3mmy_A 129 ----PVKTIHWIKAPNYSCVMTG 147 (368)
T ss_dssp ----CEEEEEEEECSSCEEEEEE
T ss_pred ----ceEEEEEEeCCCCCEEEEc
Confidence 5778999 8888877765
No 175
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=98.12 E-value=1.2e-06 Score=84.29 Aligned_cols=92 Identities=11% Similarity=0.070 Sum_probs=47.1
Q ss_pred eEEEEeCCCCceeeEecCCCCCCCcCCC-ce-EEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccC
Q 007620 453 QYHILSWPLKKSSQITNFPHPYPTLASL-QK-EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAA 530 (595)
Q Consensus 453 ~l~~~d~~~~~~~~Lt~~~~~~~~~~~~-~~-e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~ 530 (595)
++|... .|+.+.+++.+.. +...+ .. +.|++ .+||.+|+|+|++|.+-. |.|+||++|++
T Consensus 4 ~~~~~~--~~~~r~~~~~~~~--~~~~~~~~e~~~~~-~~dG~~i~g~l~~P~~~~-----~~p~Vl~~HG~-------- 65 (259)
T 4ao6_A 4 SHHHHH--HGSMRHQMSWNGK--DERKLSVQERGFSL-EVDGRTVPGVYWSPAEGS-----SDRLVLLGHGG-------- 65 (259)
T ss_dssp ---------------CEECSC--CEEETTEEEEEEEE-EETTEEEEEEEEEESSSC-----CSEEEEEEC----------
T ss_pred cccccc--cCcceeeeccCCC--ccccCCceEEEEEE-eeCCeEEEEEEEeCCCCC-----CCCEEEEeCCC--------
Confidence 344443 6777777776532 22334 33 33444 579999999999998632 34999997642
Q ss_pred CcccCCCCc-ccCCCCchhHHHhccCeEEEeCCCCceeec
Q 007620 531 GQVRGSPNE-FSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 531 ~~~~ggp~~-~~~~~~~~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
+.. .........|.||++||+|+. ++.+..|.
T Consensus 66 ------g~~~~~~~~~~~a~~la~~Gy~Vl~-~D~rG~G~ 98 (259)
T 4ao6_A 66 ------TTHKKVEYIEQVAKLLVGRGISAMA-IDGPGHGE 98 (259)
T ss_dssp ------------CHHHHHHHHHHHTTEEEEE-ECCCC---
T ss_pred ------cccccchHHHHHHHHHHHCCCeEEe-eccCCCCC
Confidence 221 111111236899999999999 77776554
No 176
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.12 E-value=0.00042 Score=71.57 Aligned_cols=114 Identities=13% Similarity=0.286 Sum_probs=61.3
Q ss_pred CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC-c-eEEEeccCCCCccCCccccccccCCCCceeecC
Q 007620 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-K-LVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (595)
Q Consensus 175 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspd 252 (595)
..+..++|+|++++++++.... ..|.+||+.. + ....+.... .....+.|+|+
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~d------------g~v~vwd~~~~~~~~~~~~~h~-------------~~v~~i~~sp~ 332 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSAD------------KTVALWDLRNLKLKLHSFESHK-------------DEIFQVQWSPH 332 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETT------------SEEEEEETTCTTSCSEEEECCS-------------SCEEEEEECSS
T ss_pred CCeEEEEeCCCCCCEEEEEeCC------------CeEEEEeCCCCCCCeEEeecCC-------------CCEEEEEECCC
Confidence 3456899999999776665432 3688999874 2 233332111 11346889999
Q ss_pred CCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCC-----------ceecc---ccCccccceeecCCCc-EEEEEE
Q 007620 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-----------PEILH---KLDLRFRSVSWCDDSL-ALVNET 317 (595)
Q Consensus 253 g~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~-----------~~~l~---~~~~~~~~~~wspDg~-~l~~~~ 317 (595)
++..++.. .. ...+.++++ ...+. ...+. .....+..+.|+|++. .++...
T Consensus 333 ~~~~l~s~-~~-----------d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 333 NETILASS-GT-----------DRRLHVWDL--SKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp CTTEEEEE-ET-----------TSCCEEEEG--GGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred CCCEEEEE-eC-----------CCcEEEEeC--CCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 87533222 11 124455554 11111 12222 1233467899999998 455543
Q ss_pred eecccceEEEEE
Q 007620 318 WYKTSQTRTWLV 329 (595)
Q Consensus 318 ~~~~~~~~L~~~ 329 (595)
.++...||.+
T Consensus 399 --~dg~i~iw~~ 408 (430)
T 2xyi_A 399 --EDNIMQVWQM 408 (430)
T ss_dssp --TTSEEEEEEE
T ss_pred --CCCCEEEeEc
Confidence 2343445544
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.12 E-value=0.0038 Score=61.69 Aligned_cols=230 Identities=7% Similarity=-0.112 Sum_probs=116.7
Q ss_pred ceEEEEcC-CCCe-eecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEE-EeccCCCCccC
Q 007620 157 AQLVLGSL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDI 233 (595)
Q Consensus 157 ~~l~~~d~-~g~~-~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~l~~~~~~~~~ 233 (595)
..|.++|+ +++. ..+........++++||| +|+++... ...|+++|..+++.. .+.-......
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~------------~~~v~~iD~~t~~~~~~i~~g~~~~~- 129 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIW------------DYRIFIINPKTYEITGYIECPDMDME- 129 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBS------------CSEEEEEETTTTEEEEEEECTTCCTT-
T ss_pred CEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECC------------CCeEEEEECCCCeEEEEEEcCCcccc-
Confidence 46778888 5654 455433444578899998 66666422 237899999877654 3321110000
Q ss_pred CccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEE
Q 007620 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLAL 313 (595)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l 313 (595)
...+..+.+ ++. .||.... ...+.+.++|. ..++.............+.++|||+.+
T Consensus 130 -------~~~p~~i~~--~~~-~lyv~~~----------~~~~~v~viD~---~t~~~~~~i~~g~~p~~i~~~~dG~l~ 186 (328)
T 3dsm_A 130 -------SGSTEQMVQ--YGK-YVYVNCW----------SYQNRILKIDT---ETDKVVDELTIGIQPTSLVMDKYNKMW 186 (328)
T ss_dssp -------TCBCCCEEE--ETT-EEEEEEC----------TTCCEEEEEET---TTTEEEEEEECSSCBCCCEECTTSEEE
T ss_pred -------CCCcceEEE--ECC-EEEEEcC----------CCCCEEEEEEC---CCCeEEEEEEcCCCccceEEcCCCCEE
Confidence 001223444 232 2544311 01346777785 323433322223344567889999855
Q ss_pred EEEEee-cc-----cceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCC
Q 007620 314 VNETWY-KT-----SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG 387 (595)
Q Consensus 314 ~~~~~~-~~-----~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g 387 (595)
+..... .. ....|+++|++++ +........... .| ..+.+++||+.+|+.. . .++
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~~~~~~~~g~---~p--~~la~~~d~~~lyv~~------~-~v~----- 247 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAETF--TVEKQFKFKLGD---WP--SEVQLNGTRDTLYWIN------N-DIW----- 247 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTTT--EEEEEEECCTTC---CC--EEEEECTTSCEEEEES------S-SEE-----
T ss_pred EEECCCccCCccccCCceEEEEECCCC--eEEEEEecCCCC---Cc--eeEEEecCCCEEEEEc------c-EEE-----
Confidence 443211 00 0258999999873 322112111000 01 1278899999888763 1 233
Q ss_pred CCCCCCcceeEeeecCCCceeeeeecCccccceeeEEeeeCCCcccccccCCEEEEEE-ecCCCcceEEEEeCCCCc
Q 007620 388 FTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSK-ESKTEITQYHILSWPLKK 463 (595)
Q Consensus 388 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~l~~~~-~s~~~p~~l~~~d~~~~~ 463 (595)
.+|+++++......... ....+.. ..++++++.++++. .+......+++++.. ++
T Consensus 248 -----------~~d~~t~~~~~~~~~~~--~~~~p~g-------i~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 248 -----------RMPVEADRVPVRPFLEF--RDTKYYG-------LTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp -----------EEETTCSSCCSSCSBCC--CSSCEEE-------EEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred -----------EEECCCCceeeeeeecC--CCCceEE-------EEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 46776666421100000 0011222 24667666666653 222456789999986 44
No 178
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.08 E-value=0.00058 Score=67.68 Aligned_cols=80 Identities=14% Similarity=0.228 Sum_probs=44.1
Q ss_pred eeEEEecCCCCCCCCceeeecC--C-CCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCC-------ce-
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGY--P-DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-------EA- 74 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~--~-~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g-------~~- 74 (595)
.|.|.|+. .+....+..+ . ....+...+|||||+.||-.+. ++.-.|| ++..+ +.
T Consensus 35 ~i~lw~~~----~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~--------D~~v~iw--~~~~~~~~~~~~~~~ 100 (330)
T 2hes_X 35 KIKLVSVK----YDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF--------DSTVSIW--AKEESADRTFEMDLL 100 (330)
T ss_dssp CEEEEECS----SSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET--------TSCEEEE--EC-------CCCEEE
T ss_pred EEEEEEec----CCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC--------CCcEEEE--EcccCcCccccceeE
Confidence 36677776 3332222212 1 2335788999999998776543 3344455 65322 11
Q ss_pred EecccCCCccccccccceEEecCCcEEEEE
Q 007620 75 KPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 75 ~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
..+..... .+..+.|+|||+.|+..
T Consensus 101 ~~~~~h~~-----~V~~v~~sp~g~~las~ 125 (330)
T 2hes_X 101 AIIEGHEN-----EVKGVAWSNDGYYLATC 125 (330)
T ss_dssp EEEC---------CEEEEEECTTSCEEEEE
T ss_pred EEEcCCCC-----cEEEEEECCCCCEEEEE
Confidence 12221121 46789999999988775
No 179
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.06 E-value=0.0012 Score=64.18 Aligned_cols=84 Identities=18% Similarity=0.222 Sum_probs=46.0
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccC--CCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPD--G~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~ 83 (595)
.|.|.|+.. ........+.++. ..+....|+|+ |+.||-.+. + ..|.++++.+++...+.....
T Consensus 32 ~v~iw~~~~-~~~~~~~~l~gH~--~~V~~v~~s~~~~g~~l~s~s~--------D--~~v~iWd~~~~~~~~~~~~~~- 97 (297)
T 2pm7_B 32 TIKIFEVEG-ETHKLIDTLTGHE--GPVWRVDWAHPKFGTILASCSY--------D--GKVMIWKEENGRWSQIAVHAV- 97 (297)
T ss_dssp CEEEEEBCS-SCBCCCEEECCCS--SCEEEEEECCGGGCSEEEEEET--------T--TEEEEEEBSSSCBCCCEEECC-
T ss_pred EEEEEecCC-CCcEEEEEEcccc--CCeEEEEecCCCcCCEEEEEcC--------C--CEEEEEEcCCCceEEEEEeec-
Confidence 467778861 0011223444322 25778899874 877665542 2 445566887764332221110
Q ss_pred cccccccceEEecC--CcEEEEE
Q 007620 84 CLNAVFGSFVWVNN--STLLIFT 104 (595)
Q Consensus 84 ~~~~~~~~~~Wspd--g~~l~~~ 104 (595)
....+..+.|+|+ |+.|+..
T Consensus 98 -h~~~v~~v~~~p~~~g~~l~s~ 119 (297)
T 2pm7_B 98 -HSASVNSVQWAPHEYGPMLLVA 119 (297)
T ss_dssp -CSSCEEEEEECCGGGCSEEEEE
T ss_pred -CCCceeEEEeCcCCCCcEEEEE
Confidence 0114678999998 7776664
No 180
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.04 E-value=0.0016 Score=64.78 Aligned_cols=113 Identities=15% Similarity=0.206 Sum_probs=70.6
Q ss_pred CcccceEEccC---CCEEEEEEecccccccCCCceEEEEEECCC-Cce--EecccCCCccccccccceEEecCCcEEEEE
Q 007620 31 AKINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAET-GEA--KPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 31 ~~~~~~~~SPD---G~~laf~~~~~~~~~~~~~~~~L~v~d~~~-g~~--~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
..+...+|||| |+.||.... + ..|.++++.+ +.. ..+..... .+..+.|+||++.|+..
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~--------d--g~i~iw~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSW--------A--NDVRCWEVQDSGQTIPKAQQMHTG-----PVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEET--------T--SEEEEEEECTTSCEEEEEEEECSS-----CEEEEEECTTSSEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEECC--------C--CcEEEEEcCCCCceeEEEeccccC-----CEEEEEECcCCCEEEEE
Confidence 36889999999 577666542 2 4566667765 443 33332222 57789999999988765
Q ss_pred ecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCeeec-CCCCeeeeeEE
Q 007620 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDF-GTPAVYTAVEP 182 (595)
Q Consensus 105 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~~l-t~~~~~~~~~~ 182 (595)
.. ...|.++++ +++...+ .....+..+.|
T Consensus 105 ~~-------------------------------------------------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~ 135 (368)
T 3mmy_A 105 SC-------------------------------------------------DKTAKMWDLSSNQAIQIAQHDAPVKTIHW 135 (368)
T ss_dssp ET-------------------------------------------------TSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred cC-------------------------------------------------CCcEEEEEcCCCCceeeccccCceEEEEE
Confidence 21 123445555 3333332 23334567888
Q ss_pred --CCCCCeEEEEEcccCccccccCcccceeEEEEcCCCce
Q 007620 183 --SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (595)
Q Consensus 183 --SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~ 220 (595)
+|+++.|+....+ ..+.+||+.+++
T Consensus 136 ~~~~~~~~l~~~~~d-------------g~i~vwd~~~~~ 162 (368)
T 3mmy_A 136 IKAPNYSCVMTGSWD-------------KTLKFWDTRSSN 162 (368)
T ss_dssp EECSSCEEEEEEETT-------------SEEEEECSSCSS
T ss_pred EeCCCCCEEEEccCC-------------CcEEEEECCCCc
Confidence 9999888877542 368899987554
No 181
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.02 E-value=0.011 Score=57.20 Aligned_cols=58 Identities=21% Similarity=0.461 Sum_probs=39.5
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
.+...|||++ .||... + ..|.++|+.+|+..++...... ...+..+.|+|+|+.|+..
T Consensus 28 ~~~l~WS~~~-~lAvg~---------D--~tV~iWd~~tg~~~~~~~~~~~--~~~V~~v~~~~~~~~l~sg 85 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL---------D--NSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVG 85 (318)
T ss_dssp CBCEEECTTS-EEEEEE---------T--TEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEE
T ss_pred ceEEEECCCC-EEEEEe---------C--CEEEEEECCCCCEEEEEEecCC--CCeEEEEEECCCCCEEEEE
Confidence 3567999997 666532 2 3577779999987665432211 1146789999999988765
No 182
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.02 E-value=0.0052 Score=63.67 Aligned_cols=79 Identities=13% Similarity=0.130 Sum_probs=47.8
Q ss_pred eeEEEecCCCCCCCCc-eeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 6 GIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~-~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
.|.|+|+. +++. +.+.. ....+....|+|++ .|+. ... ...|.++++.+++.........
T Consensus 143 ~i~vwd~~----~~~~~~~~~~--h~~~V~~l~~~~~~-~l~s-~s~---------dg~i~vwd~~~~~~~~~~~~h~-- 203 (464)
T 3v7d_B 143 MIRVYDSI----NKKFLLQLSG--HDGGVWALKYAHGG-ILVS-GST---------DRTVRVWDIKKGCCTHVFEGHN-- 203 (464)
T ss_dssp CEEEEETT----TTEEEEEECC--CSSCEEEEEECSTT-EEEE-EET---------TSCEEEEETTTTEEEEEECCCS--
T ss_pred cEEEEECC----CCcEEEEEeC--CCcCEEEEEEcCCC-EEEE-EeC---------CCCEEEEECCCCcEEEEECCCC--
Confidence 47788887 4443 33442 23358899999999 4443 322 2456777998887554433221
Q ss_pred ccccccceEEe--cCCcEEEEEe
Q 007620 85 LNAVFGSFVWV--NNSTLLIFTI 105 (595)
Q Consensus 85 ~~~~~~~~~Ws--pdg~~l~~~~ 105 (595)
..+..+.|+ ++++.|+...
T Consensus 204 --~~v~~l~~~~~~~~~~l~s~s 224 (464)
T 3v7d_B 204 --STVRCLDIVEYKNIKYIVTGS 224 (464)
T ss_dssp --SCEEEEEEEESSSCEEEEEEE
T ss_pred --CccEEEEEecCCCCCEEEEEc
Confidence 146677887 5667666653
No 183
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.01 E-value=0.00036 Score=77.76 Aligned_cols=61 Identities=18% Similarity=0.106 Sum_probs=37.2
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecC--CcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN--STLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspd--g~~l~~~ 104 (595)
.+....|||||++|+.... + ..|.++++.++....+...... ...+..+.|+|+ ++.|+..
T Consensus 11 ~V~~l~~s~dg~~latg~~--------d--g~I~vwd~~~~~~~~~~~l~~h--~~~V~~l~~s~~~~~~~l~s~ 73 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSS--------D--KTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASC 73 (753)
T ss_dssp CEEEECCCSSSCCEEEEET--------T--TEEEEEEEETTEEEEEEEECCC--SSCEEEEEECCTTSCSEEEEE
T ss_pred eeEEEEECCCCCeEEEEEC--------C--CcEEEEecCCCCCccceeccCC--cCceEEEEecCCCCCCEEEEE
Confidence 4788999999998876643 2 3455556654332222111110 125678999988 8877765
No 184
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.99 E-value=0.00098 Score=65.52 Aligned_cols=81 Identities=15% Similarity=0.152 Sum_probs=47.3
Q ss_pred eeEEEecCCCCCCCCc-eeeecC-CCCCcccceEEcc--CCCEEEEEEecccccccCCCceEEEEEECCCCc--------
Q 007620 6 GIGIHRLLPDDSLGPE-KEVHGY-PDGAKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------- 73 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~-~~lt~~-~~~~~~~~~~~SP--DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~-------- 73 (595)
.|.|+|+.. .... +.+..+ .....+....|+| ||+.|+.... + ..|.++++.+++
T Consensus 34 ~i~iw~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~--------d--g~v~vwd~~~~~~~~~~~~~ 100 (351)
T 3f3f_A 34 HIKVFKLDK---DTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY--------D--KTVKLWEEDPDQEECSGRRW 100 (351)
T ss_dssp EEEEEEECS---SSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET--------T--SCEEEEEECTTSCTTSSCSE
T ss_pred eEEEEECCC---CCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC--------C--CeEEEEecCCCcccccccCc
Confidence 477888872 2211 122111 1233588999999 6988776653 2 345555766653
Q ss_pred --eEecccCCCccccccccceEEecC--CcEEEEE
Q 007620 74 --AKPLFESPDICLNAVFGSFVWVNN--STLLIFT 104 (595)
Q Consensus 74 --~~~lt~~~~~~~~~~~~~~~Wspd--g~~l~~~ 104 (595)
...+.... ..+..+.|+|+ ++.|+..
T Consensus 101 ~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~ 130 (351)
T 3f3f_A 101 NKLCTLNDSK-----GSLYSVKFAPAHLGLKLACL 130 (351)
T ss_dssp EEEEEECCCS-----SCEEEEEECCGGGCSEEEEE
T ss_pred ceeeeecccC-----CceeEEEEcCCCCCcEEEEe
Confidence 22222212 24678999999 8887775
No 185
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.95 E-value=0.0035 Score=64.16 Aligned_cols=200 Identities=7% Similarity=-0.007 Sum_probs=113.0
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
......|+|||+ |++ +.. ....|++++++++....+..... ... +.|+++++.|++....
T Consensus 132 ~P~~la~d~~g~-lyv-~d~--------~~~~I~~id~~~g~~~~~~~~~~-----~~~-ia~~~~g~~l~~~d~~---- 191 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLA-YQR--------DDPRVRLISVDDNKVTTVHPGFK-----GGK-PAVTKDKQRVYSIGWE---- 191 (409)
T ss_dssp CEEEEEECSTTE-EEE-EET--------TTTEEEEEETTTTEEEEEEETCC-----BCB-CEECTTSSEEEEEBSS----
T ss_pred CceEEEEeCCCC-EEE-Eec--------CCCcEEEEECCCCEEEEeeccCC-----CCc-eeEecCCCcEEEEecC----
Confidence 355678999997 544 432 34689999999888776644322 223 8999999988775210
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC-C-Ceeec----C-CCCeeeeeEECC
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-G-TAKDF----G-TPAVYTAVEPSP 184 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g-~~~~l----t-~~~~~~~~~~Sp 184 (595)
+ ...|++++.. + ..+.+ . .......++++|
T Consensus 192 ------------------~-------------------------~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p 228 (409)
T 3hrp_A 192 ------------------G-------------------------THTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDE 228 (409)
T ss_dssp ------------------T-------------------------TCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECT
T ss_pred ------------------C-------------------------CceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeC
Confidence 0 1146666663 2 22333 2 122345789999
Q ss_pred CCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCC-CceeecCCCeeEEEEEee
Q 007620 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR-SISWRADKPSTLYWVEAQ 263 (595)
Q Consensus 185 Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~wspdg~~~l~~~~~~ 263 (595)
++..|++.. . ...|+++|.+++....+......... ...+. .+.++|++. .||+..
T Consensus 229 ~~g~lyv~d-~------------~~~I~~~d~~~~~~~~~~~~~~~g~~-------~~~P~~~ia~~p~~g-~lyv~d-- 285 (409)
T 3hrp_A 229 TEEWLYFVD-S------------NKNFGRFNVKTQEVTLIKQLELSGSL-------GTNPGPYLIYYFVDS-NFYMSD-- 285 (409)
T ss_dssp TSSEEEEEC-T------------TCEEEEEETTTCCEEEEEECCCCSCC-------CCSSCCEEEEETTTT-EEEEEE--
T ss_pred CCCeEEEEE-C------------CCcEEEEECCCCCEEEEecccccCCC-------CCCccccEEEeCCCC-EEEEEe--
Confidence 777787742 2 23799999987766555322110000 01123 678888654 366542
Q ss_pred cCCCcccccCCcceEEeccCCCCCCCCceeccccC---------------ccccceeecCCCcEEEEEEeecccceEEEE
Q 007620 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD---------------LRFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (595)
Q Consensus 264 d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~---------------~~~~~~~wspDg~~l~~~~~~~~~~~~L~~ 328 (595)
. ..+.++.++. ++ ....+.... .....+.+++||..++.+.+ ...+|.+
T Consensus 286 -~--------~~~~I~~~~~---~g-~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~---~~~~I~~ 349 (409)
T 3hrp_A 286 -Q--------NLSSVYKITP---DG-ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF---KGYCLRK 349 (409)
T ss_dssp -T--------TTTEEEEECT---TC-CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT---TTCEEEE
T ss_pred -C--------CCCEEEEEec---CC-CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC---CCCEEEE
Confidence 1 2235666664 33 333222211 12345778999985554320 3458999
Q ss_pred EeCCC
Q 007620 329 VCPGS 333 (595)
Q Consensus 329 ~d~~~ 333 (595)
+++.+
T Consensus 350 ~~~~~ 354 (409)
T 3hrp_A 350 LDILD 354 (409)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99655
No 186
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.94 E-value=0.0021 Score=63.86 Aligned_cols=133 Identities=14% Similarity=0.128 Sum_probs=83.2
Q ss_pred eEEEecCCCCCCCC-ceeeecCCCCCcccceEEcc--CCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc
Q 007620 7 IGIHRLLPDDSLGP-EKEVHGYPDGAKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (595)
Q Consensus 7 ~~~~~~~~~~~~g~-~~~lt~~~~~~~~~~~~~SP--DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~ 83 (595)
+.+.++. .++ .+.+. ......+....|+| +|+.|+-.+. ...|.++|+.+++...+.....
T Consensus 106 ~~~~~~~----~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~----------dg~i~~wd~~~~~~~~~~~~~~- 169 (343)
T 3lrv_A 106 ITILDSK----TNKVLREIE-VDSANEIIYMYGHNEVNTEYFIWADN----------RGTIGFQSYEDDSQYIVHSAKS- 169 (343)
T ss_dssp EEEEETT----TCCEEEEEE-CCCSSCEEEEECCC---CCEEEEEET----------TCCEEEEESSSSCEEEEECCCS-
T ss_pred eEEeecC----CcceeEEee-cCCCCCEEEEEcCCCCCCCEEEEEeC----------CCcEEEEECCCCcEEEEEecCC-
Confidence 3445655 455 23333 23333588899999 9998776542 2457777998888755542222
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEc
Q 007620 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 163 (595)
...+..+.|+|||+.|+.... ...|.++|
T Consensus 170 --~~~i~~~~~~pdg~~lasg~~-------------------------------------------------dg~i~iwd 198 (343)
T 3lrv_A 170 --DVEYSSGVLHKDSLLLALYSP-------------------------------------------------DGILDVYN 198 (343)
T ss_dssp --SCCCCEEEECTTSCEEEEECT-------------------------------------------------TSCEEEEE
T ss_pred --CCceEEEEECCCCCEEEEEcC-------------------------------------------------CCEEEEEE
Confidence 114678999999998776421 12355566
Q ss_pred C-CCC-e-eecCC--CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCce
Q 007620 164 L-DGT-A-KDFGT--PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (595)
Q Consensus 164 ~-~g~-~-~~lt~--~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~ 220 (595)
+ +++ . ..+.. ...+..++|||||++|+.... . .+.+||+..++
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-------------~-~v~iwd~~~~~ 246 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-------------Q-TVVCFDLRKDV 246 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-------------S-BEEEEETTSST
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-------------C-eEEEEEcCCCC
Confidence 6 443 2 34433 345678999999999988762 1 68899987543
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.93 E-value=0.0026 Score=62.95 Aligned_cols=192 Identities=11% Similarity=-0.024 Sum_probs=103.9
Q ss_pred cCCCEEEEEEecccccccCCCceEEEEEECCCCce-EecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCcccc
Q 007620 40 PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMV 118 (595)
Q Consensus 40 PDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~-~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~ 118 (595)
.++.+|+.+.. ....|.++|+++++. .++.... ....+.+++|| .|++....
T Consensus 51 ~~~~~lyv~~~---------~~~~v~viD~~t~~~~~~i~~~~------~p~~i~~~~~g-~lyv~~~~----------- 103 (328)
T 3dsm_A 51 IRDGIGWIVVN---------NSHVIFAIDINTFKEVGRITGFT------SPRYIHFLSDE-KAYVTQIW----------- 103 (328)
T ss_dssp EETTEEEEEEG---------GGTEEEEEETTTCCEEEEEECCS------SEEEEEEEETT-EEEEEEBS-----------
T ss_pred EECCEEEEEEc---------CCCEEEEEECcccEEEEEcCCCC------CCcEEEEeCCC-eEEEEECC-----------
Confidence 35677655543 246799999998886 4453211 34577888998 45554100
Q ss_pred CCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCee-ecCCCC------eeeeeEECCCCCeEE
Q 007620 119 PLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA------VYTAVEPSPDQKYVL 190 (595)
Q Consensus 119 ~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~~-~lt~~~------~~~~~~~SpDg~~l~ 190 (595)
...|+++|+ +++.. .+..+. ....+++ ++++|+
T Consensus 104 -------------------------------------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~ly 144 (328)
T 3dsm_A 104 -------------------------------------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVY 144 (328)
T ss_dssp -------------------------------------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEE
T ss_pred -------------------------------------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEE
Confidence 134666776 44432 232111 2234555 577777
Q ss_pred EEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcc
Q 007620 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (595)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (595)
++.... ...|.++|+.+++. +.+... ..+..+..++||+ +++. ........
T Consensus 145 v~~~~~-----------~~~v~viD~~t~~~~~~i~~g--------------~~p~~i~~~~dG~--l~v~-~~~~~~~~ 196 (328)
T 3dsm_A 145 VNCWSY-----------QNRILKIDTETDKVVDELTIG--------------IQPTSLVMDKYNK--MWTI-TDGGYEGS 196 (328)
T ss_dssp EEECTT-----------CCEEEEEETTTTEEEEEEECS--------------SCBCCCEECTTSE--EEEE-BCCBCTTC
T ss_pred EEcCCC-----------CCEEEEEECCCCeEEEEEEcC--------------CCccceEEcCCCC--EEEE-ECCCccCC
Confidence 764211 24799999987654 333211 1123567788876 5544 21110000
Q ss_pred cccCCcceEEeccCCCCCCCCceecccc--CccccceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 270 VEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 270 ~~~~~~~~~~~~d~~~~~g~~~~~l~~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
........++++|. ..++....... ......+.++||+..++... . .++++|++++
T Consensus 197 ~~~~~~~~v~~id~---~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~----~--~v~~~d~~t~ 254 (328)
T 3dsm_A 197 PYGYEAPSLYRIDA---ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN----N--DIWRMPVEAD 254 (328)
T ss_dssp SSCBCCCEEEEEET---TTTEEEEEEECCTTCCCEEEEECTTSCEEEEES----S--SEEEEETTCS
T ss_pred ccccCCceEEEEEC---CCCeEEEEEecCCCCCceeEEEecCCCEEEEEc----c--EEEEEECCCC
Confidence 00001246788885 33344322222 22456789999988765542 1 6899999874
No 188
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.92 E-value=0.0026 Score=63.65 Aligned_cols=71 Identities=8% Similarity=0.020 Sum_probs=41.7
Q ss_pred CCCceeecCCCeeEEEEEeecCCCcccccCCcce-EEeccCCCCCCCCceecc-c-cCccccceeecCCCcEEEEEEeec
Q 007620 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI-IYTQPAEPAEGEKPEILH-K-LDLRFRSVSWCDDSLALVNETWYK 320 (595)
Q Consensus 244 ~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~-~~~~d~~~~~g~~~~~l~-~-~~~~~~~~~wspDg~~l~~~~~~~ 320 (595)
...+.|+|||+. |+-. ..... +.+||+ .++.....+. . ....+..+.|+|||..|+... .
T Consensus 198 v~~~~~s~~g~~-l~s~------------s~d~~~v~iwd~--~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s--~ 260 (355)
T 3vu4_A 198 IKMVRLNRKSDM-VATC------------SQDGTIIRVFKT--EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVS--D 260 (355)
T ss_dssp EEEEEECTTSSE-EEEE------------ETTCSEEEEEET--TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEE--T
T ss_pred eEEEEECCCCCE-EEEE------------eCCCCEEEEEEC--CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEE--C
Confidence 346889999973 3222 11234 777786 2332223343 1 345677899999999887754 2
Q ss_pred ccceEEEEEeCCC
Q 007620 321 TSQTRTWLVCPGS 333 (595)
Q Consensus 321 ~~~~~L~~~d~~~ 333 (595)
++ .|.++|+..
T Consensus 261 d~--~v~iw~~~~ 271 (355)
T 3vu4_A 261 KW--TLHVFEIFN 271 (355)
T ss_dssp TC--EEEEEESSC
T ss_pred CC--EEEEEEccC
Confidence 23 455556654
No 189
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.92 E-value=0.0008 Score=66.97 Aligned_cols=166 Identities=10% Similarity=0.073 Sum_probs=91.6
Q ss_pred eEEEEcC-CCC-eeecC--CCCeeeeeEECC--CCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCc
Q 007620 158 QLVLGSL-DGT-AKDFG--TPAVYTAVEPSP--DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE 231 (595)
Q Consensus 158 ~l~~~d~-~g~-~~~lt--~~~~~~~~~~Sp--Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~ 231 (595)
.+.++++ .++ .+.+. ....+..++|+| +|++|+....+ ..+.+||+.+++...+......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d-------------g~i~~wd~~~~~~~~~~~~~~~- 170 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR-------------GTIGFQSYEDDSQYIVHSAKSD- 170 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETT-------------CCEEEEESSSSCEEEEECCCSS-
T ss_pred ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC-------------CcEEEEECCCCcEEEEEecCCC-
Confidence 4555565 444 33332 223456889999 99988877542 3688999987766443322110
Q ss_pred cCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce--eccc-cCccccceeecC
Q 007620 232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE--ILHK-LDLRFRSVSWCD 308 (595)
Q Consensus 232 ~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~--~l~~-~~~~~~~~~wsp 308 (595)
.....+.|+|||.. |+.. .....+.++|. ..++.. .+.. ....+..+.|+|
T Consensus 171 ----------~~i~~~~~~pdg~~-lasg------------~~dg~i~iwd~---~~~~~~~~~~~~~h~~~v~~l~fs~ 224 (343)
T 3lrv_A 171 ----------VEYSSGVLHKDSLL-LALY------------SPDGILDVYNL---SSPDQASSRFPVDEEAKIKEVKFAD 224 (343)
T ss_dssp ----------CCCCEEEECTTSCE-EEEE------------CTTSCEEEEES---SCTTSCCEECCCCTTSCEEEEEECT
T ss_pred ----------CceEEEEECCCCCE-EEEE------------cCCCEEEEEEC---CCCCCCccEEeccCCCCEEEEEEeC
Confidence 11346789999873 2221 12346777786 333332 3433 355678899999
Q ss_pred CCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 309 DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 309 Dg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
||..|+... + + .|.++|+.+.. ....+....... ... +...+.|+++|++++...
T Consensus 225 ~g~~l~s~~--~-~--~v~iwd~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 225 NGYWMVVEC--D-Q--TVVCFDLRKDV-GTLAYPTYTIPE-FKT-GTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp TSSEEEEEE--S-S--BEEEEETTSST-TCBSSCCCBC-------CCEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEe--C-C--eEEEEEcCCCC-cceeeccccccc-ccc-cceEEEECCCCCEEEEec
Confidence 999877764 2 2 57777887642 112111100000 000 001278999999887654
No 190
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.91 E-value=0.00061 Score=68.50 Aligned_cols=92 Identities=13% Similarity=-0.074 Sum_probs=51.6
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc-
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC- 84 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~- 84 (595)
.+++.|+. +++...- ++-+... .+.+||||++|+......+.....+....|.++|+.+++...-.......
T Consensus 47 ~vsvID~~----t~~v~~~--i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAG----CGVTLGH--SLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETT----TTEEEEE--EEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECC----CCeEEEE--EeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 56666766 4544322 2233334 79999999987665421000000012477999999998753322111000
Q ss_pred --ccccccceEEecCCcEEEEE
Q 007620 85 --LNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 85 --~~~~~~~~~Wspdg~~l~~~ 104 (595)
.......+.+||||++|++.
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVa 141 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFF 141 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEE
T ss_pred cccCCCcceEEEcCCCCEEEEE
Confidence 00123478999999998886
No 191
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.88 E-value=0.0042 Score=59.25 Aligned_cols=184 Identities=15% Similarity=0.089 Sum_probs=101.8
Q ss_pred eEEEEEECCCCceEecccCCCcc-ccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccc
Q 007620 62 LRVWIADAETGEAKPLFESPDIC-LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (595)
Q Consensus 62 ~~L~v~d~~~g~~~~lt~~~~~~-~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 140 (595)
..|++++++++..+.+....... .......+.|++++..|+++-.
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~---------------------------------- 55 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI---------------------------------- 55 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET----------------------------------
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC----------------------------------
Confidence 47999999876543221000000 0012347889998888888621
Q ss_pred cccCcCCccceEEeecceEEEEcCCC-CeeecCCC--CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC
Q 007620 141 LLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (595)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~lt~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (595)
....|++++++| ..+.+... .....++++|++..|+++... ...|.+++++
T Consensus 56 --------------~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~------------~~~I~~~~~~ 109 (267)
T 1npe_A 56 --------------SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ------------LDRIEVAKMD 109 (267)
T ss_dssp --------------TTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT------------TTEEEEEETT
T ss_pred --------------CCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC------------CCEEEEEEcC
Confidence 023567777755 33333222 234578899998888887542 2378888988
Q ss_pred CceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecccc
Q 007620 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL 297 (595)
Q Consensus 218 g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~ 297 (595)
+...+.+..... ..+..+...|++. .||+.... .....+++++. +|...+.+...
T Consensus 110 g~~~~~~~~~~~------------~~P~~i~vd~~~g-~lyv~~~~---------~~~~~I~~~~~---dg~~~~~~~~~ 164 (267)
T 1npe_A 110 GTQRRVLFDTGL------------VNPRGIVTDPVRG-NLYWTDWN---------RDNPKIETSHM---DGTNRRILAQD 164 (267)
T ss_dssp SCSCEEEECSSC------------SSEEEEEEETTTT-EEEEEECC---------SSSCEEEEEET---TSCCCEEEECT
T ss_pred CCCEEEEEECCC------------CCccEEEEeeCCC-EEEEEECC---------CCCcEEEEEec---CCCCcEEEEEC
Confidence 765444432110 1123567777654 37665211 01235665564 44333333322
Q ss_pred C-ccccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 298 D-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 298 ~-~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
. .....+.+++++..|+.... ....|+++|+++
T Consensus 165 ~~~~P~gia~d~~~~~lyv~d~---~~~~I~~~~~~g 198 (267)
T 1npe_A 165 NLGLPNGLTFDAFSSQLCWVDA---GTHRAECLNPAQ 198 (267)
T ss_dssp TCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTE
T ss_pred CCCCCcEEEEcCCCCEEEEEEC---CCCEEEEEecCC
Confidence 2 23456788998776554432 334899999987
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.82 E-value=0.015 Score=55.02 Aligned_cols=194 Identities=11% Similarity=-0.008 Sum_probs=101.3
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
......++|||+ |++++.. ....|++++..++....+..... .....+.++++|+ |++...
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~--------~~~~i~~~~~~~~~~~~~~~~~~----~~p~~i~~~~~g~-l~v~~~----- 85 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEG--------MYGRVVKLATGSTGTTVLPFNGL----YQPQGLAVDGAGT-VYVTDF----- 85 (270)
T ss_dssp CEEEEEECTTCC-EEEEECS--------SSCEEEEECC-----EECCCCSC----CSCCCEEECTTCC-EEEEET-----
T ss_pred CccceEECCCCC-EEEEccC--------CCCcEEEecCCCcccceEeeCCc----CCcceeEECCCCC-EEEEcC-----
Confidence 456778999997 5442421 34678888887665444321110 1245788889888 444310
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCC-CeeecCCC--CeeeeeEECCCCCe
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKY 188 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~lt~~--~~~~~~~~SpDg~~ 188 (595)
...|++++.++ ....+... .....+.++|+|+
T Consensus 86 --------------------------------------------~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~- 120 (270)
T 1rwi_B 86 --------------------------------------------NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA- 120 (270)
T ss_dssp --------------------------------------------TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-
T ss_pred --------------------------------------------CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-
Confidence 12455666654 33333222 2345788999987
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCc
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (595)
|+++... ...|++++..+........... ..+..+.+.++|+ |++...
T Consensus 121 l~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~------------~~p~~i~~~~~g~--l~v~~~------ 168 (270)
T 1rwi_B 121 VYVADRG------------NNRVVKLAAGSKTQTVLPFTGL------------NDPDGVAVDNSGN--VYVTDT------ 168 (270)
T ss_dssp EEEEEGG------------GTEEEEECTTCCSCEECCCCSC------------CSCCCEEECTTCC--EEEEEG------
T ss_pred EEEEECC------------CCEEEEEECCCceeEeeccccC------------CCceeEEEeCCCC--EEEEEC------
Confidence 5555432 2367778755443322211000 1134577788876 554421
Q ss_pred ccccCCcceEEeccCCCCCCCCceeccccC-ccccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 269 ~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
....+++++. .++......... .....+.++++|..++... ....|+++++++
T Consensus 169 -----~~~~i~~~~~---~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~----~~~~v~~~~~~~ 222 (270)
T 1rwi_B 169 -----DNNRVVKLEA---ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEH----NTNQVVKLLAGS 222 (270)
T ss_dssp -----GGTEEEEECT---TTCCEEECCCSSCCSEEEEEECTTCCEEEEET----TTSCEEEECTTC
T ss_pred -----CCCEEEEEec---CCCceEeecccCCCCceEEEECCCCCEEEEEC----CCCcEEEEcCCC
Confidence 1235666675 433322222111 3345678889986555542 223688999877
No 193
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.81 E-value=0.0016 Score=66.23 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=22.8
Q ss_pred CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCce
Q 007620 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (595)
Q Consensus 175 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~ 220 (595)
.....++|+|++..++++...+ ..+.+||+.++.
T Consensus 187 ~~v~~v~~~p~~~~~l~~~~~d------------~~v~~wd~~t~~ 220 (393)
T 4gq1_A 187 SPGISVQFRPSNPNQLIVGERN------------GNIRIFDWTLNL 220 (393)
T ss_dssp SCEEEEEEETTEEEEEEEEETT------------SEEEEEETTCCC
T ss_pred CCcEEEEECCCCCceEEecCCC------------CEEEEEECCCCc
Confidence 3456789999987655554332 368889987553
No 194
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.81 E-value=0.0042 Score=59.21 Aligned_cols=145 Identities=14% Similarity=0.126 Sum_probs=89.6
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
....+.|+|+++.|+++-. ....|++++++++....+..... .....+.+++++..|+++-.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~~~~~~~~~~----~~p~~ia~d~~~~~lyv~d~----- 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDI---------SEPSIGRASLHGGEPTTIIRQDL----GSPEGIALDHLGRTIFWTDS----- 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEET---------TTTEEEEEESSSCCCEEEECTTC----CCEEEEEEETTTTEEEEEET-----
T ss_pred cEEEEEEecCCCEEEEEEC---------CCCEEEEEecCCCCcEEEEECCC----CCccEEEEEecCCeEEEEEC-----
Confidence 4568899999988877642 35789999998776554432110 02457888998888887621
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCC-eeecCC-C-CeeeeeEECCCCCe
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGT-P-AVYTAVEPSPDQKY 188 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~lt~-~-~~~~~~~~SpDg~~ 188 (595)
....|++++++|+ .+.+.. . .....++++|++.+
T Consensus 99 -------------------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~ 135 (267)
T 1npe_A 99 -------------------------------------------QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGN 135 (267)
T ss_dssp -------------------------------------------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTE
T ss_pred -------------------------------------------CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCE
Confidence 0235666777663 333322 2 23457899999888
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEE
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (595)
|+++..... ...|+++++++...+.+..... ..+..+.+++++. .||+.
T Consensus 136 lyv~~~~~~----------~~~I~~~~~dg~~~~~~~~~~~------------~~P~gia~d~~~~-~lyv~ 184 (267)
T 1npe_A 136 LYWTDWNRD----------NPKIETSHMDGTNRRILAQDNL------------GLPNGLTFDAFSS-QLCWV 184 (267)
T ss_dssp EEEEECCSS----------SCEEEEEETTSCCCEEEECTTC------------SCEEEEEEETTTT-EEEEE
T ss_pred EEEEECCCC----------CcEEEEEecCCCCcEEEEECCC------------CCCcEEEEcCCCC-EEEEE
Confidence 888753211 2368888888765555432211 1123578888876 37665
No 195
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.80 E-value=0.0017 Score=66.78 Aligned_cols=60 Identities=13% Similarity=0.112 Sum_probs=39.1
Q ss_pred CcccceEEcc-CCCEEEEEEecccccccCCCceEEEEEECCC---CceE--ecc-cCCCccccccccceEEecCCcEEEE
Q 007620 31 AKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAET---GEAK--PLF-ESPDICLNAVFGSFVWVNNSTLLIF 103 (595)
Q Consensus 31 ~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~---g~~~--~lt-~~~~~~~~~~~~~~~Wspdg~~l~~ 103 (595)
..+...+||| ||+.||..+. + ..|.++++.+ +... .++ ... ..+..+.|+|+++.|+.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~--------d--g~v~vwd~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSD--------Q--GVIKIWNLKEIIVGEVYSSSLTYDCS-----STVTQITMIPNFDAFAV 128 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEET--------T--SEEEEEEHHHHHTTCCCSCSEEEECS-----SCEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCCEEEEecC--------C--ceEEEeECcccccCcccceeeeccCC-----CCEEEEEEeCCCCEEEE
Confidence 3688999999 9998876653 2 4555667655 3311 111 112 25778999999998877
Q ss_pred Ee
Q 007620 104 TI 105 (595)
Q Consensus 104 ~~ 105 (595)
..
T Consensus 129 ~s 130 (437)
T 3gre_A 129 SS 130 (437)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 196
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.79 E-value=0.002 Score=64.55 Aligned_cols=68 Identities=7% Similarity=-0.063 Sum_probs=40.1
Q ss_pred eccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEee-c-ccccccCCCCCCCeeeCCCCCEEEEE
Q 007620 293 ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD-R-VFENVYSDPGSPMMTRTSTGTNVIAK 370 (595)
Q Consensus 293 ~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~dg~~l~~~ 370 (595)
.+......+..+.|+|||..|+.... ++. .+.++|+.++ +....+. . ... .+ ..+.|+|||+.|+..
T Consensus 190 ~~~~h~~~v~~~~~s~~g~~l~s~s~--d~~-~v~iwd~~~~--~~~~~~~~g~h~~-~v-----~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 190 LIKAHTNPIKMVRLNRKSDMVATCSQ--DGT-IIRVFKTEDG--VLVREFRRGLDRA-DV-----VDMKWSTDGSKLAVV 258 (355)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEET--TCS-EEEEEETTTC--CEEEEEECTTCCS-CE-----EEEEECTTSCEEEEE
T ss_pred EEEccCCceEEEEECCCCCEEEEEeC--CCC-EEEEEECCCC--cEEEEEEcCCCCC-cE-----EEEEECCCCCEEEEE
Confidence 34444556788999999998877642 232 1556687763 2222222 1 111 01 127899999987766
Q ss_pred e
Q 007620 371 I 371 (595)
Q Consensus 371 ~ 371 (595)
.
T Consensus 259 s 259 (355)
T 3vu4_A 259 S 259 (355)
T ss_dssp E
T ss_pred E
Confidence 5
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.77 E-value=0.0056 Score=59.53 Aligned_cols=66 Identities=9% Similarity=0.021 Sum_probs=36.4
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecC-CcE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN-STL 100 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspd-g~~ 100 (595)
....+.|+|||+ |++++......+ .....|+++++++++.+.+...........+..+.+++| |++
T Consensus 19 ~~~~~~~~~~g~-l~~~~~~~~~~~--~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l 85 (314)
T 1pjx_A 19 GAEGPVFDKNGD-FYIVAPEVEVNG--KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQL 85 (314)
T ss_dssp TCEEEEECTTSC-EEEEETTCEETT--EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEE
T ss_pred CccCceECCCCC-EEEEEeccccCC--CCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcE
Confidence 467899999995 555510000000 123579999988888766643100000113457788888 653
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.74 E-value=0.0051 Score=62.91 Aligned_cols=82 Identities=12% Similarity=0.018 Sum_probs=45.1
Q ss_pred eEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCce-EecccCCCccc
Q 007620 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICL 85 (595)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~-~~lt~~~~~~~ 85 (595)
|...|+. ++....+... ..... +.|+|+|+.|++... .+...||+++..++.. +.+.......
T Consensus 154 I~~id~~----~g~~~~~~~~--~~~~~-ia~~~~g~~l~~~d~--------~~~~~I~~~d~~~~~~~~~~g~~~~~~- 217 (409)
T 3hrp_A 154 VRLISVD----DNKVTTVHPG--FKGGK-PAVTKDKQRVYSIGW--------EGTHTVYVYMKASGWAPTRIGQLGSTF- 217 (409)
T ss_dssp EEEEETT----TTEEEEEEET--CCBCB-CEECTTSSEEEEEBS--------STTCEEEEEEGGGTTCEEEEEECCTTS-
T ss_pred EEEEECC----CCEEEEeecc--CCCCc-eeEecCCCcEEEEec--------CCCceEEEEEcCCCceeEEeeeccchh-
Confidence 4444554 4555554432 22234 999999997766542 2233899999887653 3331100000
Q ss_pred cccccceEEecCCcEEEEE
Q 007620 86 NAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~ 104 (595)
......+.++|++..|++.
T Consensus 218 ~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp CSCCCBCEECTTSSEEEEE
T ss_pred cCCcEEEEEeCCCCeEEEE
Confidence 0134578899966666664
No 199
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.74 E-value=0.013 Score=59.30 Aligned_cols=184 Identities=14% Similarity=0.091 Sum_probs=108.3
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|+..++. ++....+. ........+.|+|.+++|+|+-. ....|++++++++..+.+......
T Consensus 97 ~I~~i~~~----~~~~~~~~--~~~~~~~gl~~d~~~~~ly~~D~---------~~~~I~r~~~~g~~~~~~~~~~~~-- 159 (386)
T 3v65_B 97 DIRQVLPH----RSEYTLLL--NNLENAIALDFHHRRELVFWSDV---------TLDRILRANLNGSNVEEVVSTGLE-- 159 (386)
T ss_dssp CEEEECTT----SCCCEEEE--CSCSCEEEEEEETTTTEEEEEET---------TTTEEEEEETTSCCEEEEECSSCS--
T ss_pred cceeeccC----CCcEEEEe--cCCCccEEEEEecCCCeEEEEeC---------CCCcEEEEecCCCCcEEEEeCCCC--
Confidence 34444554 44444443 22234678899998888877632 346899999988776555322110
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC
Q 007620 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 165 (595)
....++..+.+..|+++-. ....|++++++
T Consensus 160 --~p~glavd~~~g~lY~~d~------------------------------------------------~~~~I~~~~~d 189 (386)
T 3v65_B 160 --SPGGLAVDWVHDKLYWTDS------------------------------------------------GTSRIEVANLD 189 (386)
T ss_dssp --CCCCEEEETTTTEEEEEET------------------------------------------------TTTEEEECBTT
T ss_pred --CccEEEEEeCCCeEEEEcC------------------------------------------------CCCeEEEEeCC
Confidence 2346778877777887621 02356667776
Q ss_pred CC-eeecCCC--CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccccccc
Q 007620 166 GT-AKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (595)
Q Consensus 166 g~-~~~lt~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~ 242 (595)
|. .+.+... .....+++.|++.+|+++.... ...|++++.+|...+.+..... .
T Consensus 190 g~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~-----------~~~I~r~~~dG~~~~~~~~~~~------------~ 246 (386)
T 3v65_B 190 GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-----------TPRIEASSMDGSGRRIIADTHL------------F 246 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS-----------SCEEEEEETTSCSCEEEECSSC------------S
T ss_pred CCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC-----------CCEEEEEeCCCCCcEEEEECCC------------C
Confidence 63 2333222 2345788999999998885422 1479999998876655532211 0
Q ss_pred CCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceec
Q 007620 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (595)
Q Consensus 243 ~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l 294 (595)
.+..+.++|++. .||+... ..+.|+.++. +|...+.+
T Consensus 247 ~PnGlavd~~~~-~lY~aD~-----------~~~~I~~~d~---dG~~~~~~ 283 (386)
T 3v65_B 247 WPNGLTIDYAGR-RMYWVDA-----------KHHVIERANL---DGSHRKAV 283 (386)
T ss_dssp CEEEEEEEGGGT-EEEEEET-----------TTTEEEEECT---TSCSCEEE
T ss_pred CeeeEEEeCCCC-EEEEEEC-----------CCCEEEEEeC---CCCeeEEE
Confidence 123577887765 4877631 2245676675 55344433
No 200
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.74 E-value=0.0012 Score=73.52 Aligned_cols=83 Identities=19% Similarity=0.220 Sum_probs=49.0
Q ss_pred eeEEEecCCCCCCCCceeeecCC-CCCcccceEEccC--CCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYP-DGAKINFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~-~~~~~~~~~~SPD--G~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~ 82 (595)
.|.|+|+. ++....+..+. ....+....|||+ |+.|+..+. + ..|.++++.+++...+.....
T Consensus 32 ~I~vwd~~----~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~--------D--g~I~vwd~~~~~~~~~~~~~~ 97 (753)
T 3jro_A 32 TIKIFEVE----GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY--------D--GKVLIWKEENGRWSQIAVHAV 97 (753)
T ss_dssp EEEEEEEE----TTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET--------T--SCEEEEEEETTEEEEEEEECC
T ss_pred cEEEEecC----CCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC--------C--CeEEEEECCCCcccccccccC
Confidence 46777876 33333332222 2235888999998 888777653 2 445666777775322221111
Q ss_pred ccccccccceEEecC--CcEEEEE
Q 007620 83 ICLNAVFGSFVWVNN--STLLIFT 104 (595)
Q Consensus 83 ~~~~~~~~~~~Wspd--g~~l~~~ 104 (595)
....+..+.|+|+ ++.|+..
T Consensus 98 --h~~~V~~v~~sp~~~~~~l~sg 119 (753)
T 3jro_A 98 --HSASVNSVQWAPHEYGPLLLVA 119 (753)
T ss_dssp --CSSCEEEEEECCGGGCSEEEEE
T ss_pred --CCCCeEEEEECCCCCCCEEEEE
Confidence 0125678999999 8877775
No 201
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.73 E-value=0.0036 Score=62.83 Aligned_cols=36 Identities=11% Similarity=-0.000 Sum_probs=26.0
Q ss_pred EEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007620 63 RVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 63 ~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
.|.++|+++++...-..... .. .+..||||+.|++.
T Consensus 47 ~vsvID~~t~~v~~~i~vG~-----~P-~i~~spDg~~lyVa 82 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF-----LS-LAVAGHSGSDFALA 82 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT-----TC-EEEECTTSSCEEEE
T ss_pred eEEEEECCCCeEEEEEeCCC-----CC-ceEECCCCCEEEEE
Confidence 89999999987543322222 22 68999999998886
No 202
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.69 E-value=0.0018 Score=63.67 Aligned_cols=81 Identities=19% Similarity=0.275 Sum_probs=45.2
Q ss_pred eeEEEecCCCCCCCCce---eeecCCCCCcccceEEcc--CCCEEEEEEecccccccCCCceEEEEEECCCCceEecccC
Q 007620 6 GIGIHRLLPDDSLGPEK---EVHGYPDGAKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~---~lt~~~~~~~~~~~~~SP--DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~ 80 (595)
.|.|.|+. ++... .+.++. ..+....|+| +|+.||-.+. + ..|.++|+.+++...+...
T Consensus 36 ~v~lwd~~----~~~~~~~~~l~gH~--~~V~~v~~~~~~~~~~l~s~s~--------D--~~v~iWd~~~~~~~~~~~~ 99 (316)
T 3bg1_A 36 SVKIFDVR----NGGQILIADLRGHE--GPVWQVAWAHPMYGNILASCSY--------D--RKVIIWREENGTWEKSHEH 99 (316)
T ss_dssp EEEEEEEE----TTEEEEEEEEECCS--SCEEEEEECCGGGSSCEEEEET--------T--SCEEEECCSSSCCCEEEEE
T ss_pred eEEEEEec----CCCcEEEEEEcCCC--ccEEEEEeCCCCCCCEEEEEEC--------C--CEEEEEECCCCcceEEEEc
Confidence 36777886 44332 333222 2578899987 4887765442 2 3455558877642222111
Q ss_pred CCccccccccceEEecC--CcEEEEE
Q 007620 81 PDICLNAVFGSFVWVNN--STLLIFT 104 (595)
Q Consensus 81 ~~~~~~~~~~~~~Wspd--g~~l~~~ 104 (595)
.. ....+..+.|+|+ |..|+..
T Consensus 100 ~~--h~~~V~~v~~~p~~~g~~lasg 123 (316)
T 3bg1_A 100 AG--HDSSVNSVCWAPHDYGLILACG 123 (316)
T ss_dssp CC--CSSCCCEEEECCTTTCSCEEEE
T ss_pred cC--CCCceEEEEECCCCCCcEEEEE
Confidence 10 0114678999998 6666654
No 203
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.67 E-value=0.044 Score=56.53 Aligned_cols=51 Identities=10% Similarity=-0.014 Sum_probs=31.7
Q ss_pred ceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 276 DIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 276 ~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
..+.++|+ ..++.. .+......+..+.|+|++..++... .++ .|.++|+.+
T Consensus 290 ~~i~vwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~--~dg--~i~vwd~~~ 341 (464)
T 3v7d_B 290 NTLIVWDV---AQMKCLYILSGHTDRIYSTIYDHERKRCISAS--MDT--TIRIWDLEN 341 (464)
T ss_dssp SCEEEEET---TTTEEEEEECCCSSCEEEEEEETTTTEEEEEE--TTS--CEEEEETTT
T ss_pred CeEEEEEC---CCCcEEEEecCCCCCEEEEEEcCCCCEEEEEe--CCC--cEEEEECCC
Confidence 35677776 322322 2333445677889999999877654 223 577778876
No 204
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.66 E-value=0.017 Score=58.74 Aligned_cols=68 Identities=12% Similarity=0.088 Sum_probs=40.3
Q ss_pred cccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeeccccccc---------CCCCC-CCeeeCCCCCEEEE
Q 007620 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVY---------SDPGS-PMMTRTSTGTNVIA 369 (595)
Q Consensus 300 ~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~---------~~~~~-~~~~~~~dg~~l~~ 369 (595)
....+..|+||+.|+...+. ...|.++|+... ..++.+-.-.+...+ ..++. ..+..++||++||+
T Consensus 322 ~pa~I~lS~DGrfLYVSnrg---~d~VavfdV~d~-~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyV 397 (462)
T 2ece_A 322 LVTDIDISLDDKFLYLSLWG---IGEVRQYDISNP-FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYV 397 (462)
T ss_dssp CCCCEEECTTSCEEEEEETT---TTEEEEEECSST-TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEE
T ss_pred ceeEEEECCCCCEEEEEeCC---CCEEEEEEecCC-CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEE
Confidence 45678899999987665432 347888887532 345555221121110 00111 34899999999988
Q ss_pred Ee
Q 007620 370 KI 371 (595)
Q Consensus 370 ~~ 371 (595)
+.
T Consensus 398 aN 399 (462)
T 2ece_A 398 TN 399 (462)
T ss_dssp EC
T ss_pred Ec
Confidence 75
No 205
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.66 E-value=0.0016 Score=68.53 Aligned_cols=180 Identities=12% Similarity=0.027 Sum_probs=95.3
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEE-c-cCCCEEEEEEecc----cccc-----cCCCceEEEEEECCCCce
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSW-S-PDGKRIAFSVRVD----EEDN-----VSSCKLRVWIADAETGEA 74 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~-S-PDG~~laf~~~~~----~~~~-----~~~~~~~L~v~d~~~g~~ 74 (595)
.|..-||. +.+..++..++.+......++ + |||++| |+..+. .+++ .......+-++|.++.+.
T Consensus 113 rVavIdl~----t~~~~~ii~ip~g~~phg~~~~~~p~~~~v-~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v 187 (595)
T 1fwx_A 113 RVARVRCD----VMKCDAILEIPNAKGIHGLRPQKWPRSNYV-FCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEV 187 (595)
T ss_dssp EEEEEETT----TTEEEEEEECSSCCSEEEEEECCSSBCSEE-EEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEE
T ss_pred EEEEEECC----CceEeeEEeCCCCCCCcceeeeecCCCcEE-EEecccccccCCCCcccccccccCceEEEEECCCCeE
Confidence 46666776 667666666776656777777 6 999998 555321 0000 013356788999998763
Q ss_pred -EecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEE
Q 007620 75 -KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY 153 (595)
Q Consensus 75 -~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 153 (595)
.+|-- .. ....+..+|||++++.+............ ..........-... +......+ ++.. .+
T Consensus 188 ~~qI~V-gg-----~pd~~~~spdGk~~~vt~~~se~~~~i~~--~~~~~~d~v~V~~~---~~~~~~v~---~Gk~-~~ 252 (595)
T 1fwx_A 188 AWQVLV-SG-----NLDNCDADYEGKWAFSTSYNSEKGMTLPE--MTAAEMDHIVVFNI---AEIEKAIA---AGDY-QE 252 (595)
T ss_dssp EEEEEE-SS-----CCCCEEECSSSSEEEEEESCTTCCSSHHH--HTCCSEEEEEEEEH---HHHHHHHH---HTCS-EE
T ss_pred EEEEEe-CC-----CccceEECCCCCEEEEEecCcccCcchhh--ccccccceEEEeec---cceeEecc---CCCe-eE
Confidence 33311 11 23567899999998887544222110000 00000000000000 00000000 1111 11
Q ss_pred eecceEEEEcC-C--CC--eeecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCc
Q 007620 154 YTTAQLVLGSL-D--GT--AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (595)
Q Consensus 154 ~~~~~l~~~d~-~--g~--~~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~ 219 (595)
...+.++|. + +. ...|..+.....+.+||||++++++... ...+.++|+++.
T Consensus 253 --i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~------------s~~VsVid~~~~ 309 (595)
T 1fwx_A 253 --LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL------------SPTVTVLDVTRF 309 (595)
T ss_dssp --ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT------------SSBEEEEEGGGH
T ss_pred --ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC------------CCeEEEEECccc
Confidence 255888888 4 32 2344433344578999999999888543 237888888743
No 206
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.0048 Score=60.91 Aligned_cols=111 Identities=18% Similarity=0.237 Sum_probs=61.2
Q ss_pred eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC-Cce----EEEeccCCCCccCCccccccccCCCCceee
Q 007620 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKL----VRELCDLPPAEDIPVCYNSVREGMRSISWR 250 (595)
Q Consensus 176 ~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~ws 250 (595)
.+..++|||||++|+..+.+ ..+.+||+. ++. ...+... ......+.|+
T Consensus 109 ~V~~v~~sp~g~~las~s~D-------------~~v~iwd~~~~~~~~~~~~~~~~h-------------~~~v~~v~~~ 162 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRD-------------KSVWIWETDESGEEYECISVLQEH-------------SQDVKHVIWH 162 (330)
T ss_dssp CEEEEEECTTSCEEEEEETT-------------SCEEEEECCTTCCCCEEEEEECCC-------------SSCEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCC-------------CEEEEEeccCCCCCeEEEEEeccC-------------CCceEEEEEC
Confidence 45688999999998877642 368889884 321 1222211 1113467899
Q ss_pred cCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce---eccccCccccceeecCC--CcEEEEEEeecccceE
Q 007620 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE---ILHKLDLRFRSVSWCDD--SLALVNETWYKTSQTR 325 (595)
Q Consensus 251 pdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~---~l~~~~~~~~~~~wspD--g~~l~~~~~~~~~~~~ 325 (595)
|++.. |+.. . ....+.+|+. ..+..+ .+......+..+.|+|+ +..++... .++..+
T Consensus 163 p~~~~-l~s~--s----------~D~~i~iW~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s--~D~~v~ 224 (330)
T 2hes_X 163 PSEAL-LASS--S----------YDDTVRIWKD---YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS--DDSTVR 224 (330)
T ss_dssp SSSSE-EEEE--E----------TTSCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE--TTSCEE
T ss_pred CCCCE-EEEE--c----------CCCeEEEEEC---CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe--CCCeEE
Confidence 99873 3221 1 1234555554 222211 23333445677889998 45565543 335556
Q ss_pred EEEEe
Q 007620 326 TWLVC 330 (595)
Q Consensus 326 L~~~d 330 (595)
||-+.
T Consensus 225 iw~~~ 229 (330)
T 2hes_X 225 VWKYM 229 (330)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 66554
No 207
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.63 E-value=0.031 Score=55.60 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=90.6
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
....+.|+|.+++|+|+-. ....|++++++++..+.+...... ....++..+.+..|+++-.
T Consensus 74 ~~~~l~~d~~~~~ly~~D~---------~~~~I~r~~~~g~~~~~~~~~~~~----~p~glavd~~~g~ly~~d~----- 135 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDV---------TLDRILRANLNGSNVEEVVSTGLE----SPGGLAVDWVHDKLYWTDS----- 135 (349)
T ss_dssp CEEEEEEETTTTEEEEEET---------TTTEEEEEETTSCSCEEEECSSCS----CCCEEEEETTTTEEEEEET-----
T ss_pred ceEEEEEeccccEEEEEec---------cCCceEEEecCCCCceEEEeCCCC----CccEEEEecCCCeEEEEcC-----
Confidence 4667889998888877632 346899999988775555322110 2346777777777777611
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCC-eeecCCC--CeeeeeEECCCCCe
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSPDQKY 188 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~lt~~--~~~~~~~~SpDg~~ 188 (595)
....|++++++|. .+.+... .....+++.|++..
T Consensus 136 -------------------------------------------~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 136 -------------------------------------------GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp -------------------------------------------TTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTE
T ss_pred -------------------------------------------CCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCe
Confidence 1235777777774 2333222 23457899999889
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEE
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (595)
|+++.... ...|++++++|...+.+..... ..+..+.+.+++. .||+.
T Consensus 173 ly~td~~~-----------~~~I~r~~~dG~~~~~~~~~~~------------~~PnGla~d~~~~-~lY~a 220 (349)
T 3v64_C 173 IYWTDWGN-----------TPRIEASSMDGSGRRIIADTHL------------FWPNGLTIDYAGR-RMYWV 220 (349)
T ss_dssp EEEEECSS-----------SCEEEEEETTSCSCEESCCSSC------------SCEEEEEEETTTT-EEEEE
T ss_pred EEEeccCC-----------CCEEEEEeCCCCCcEEEEECCC------------CCcceEEEeCCCC-EEEEE
Confidence 98885432 1479999998876666532211 1123577887765 48776
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.63 E-value=0.01 Score=57.58 Aligned_cols=238 Identities=10% Similarity=0.093 Sum_probs=121.1
Q ss_pred eeEEEecCCCCCCCCceeeecCC----CCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEec-ccC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYP----DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL-FES 80 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~----~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~l-t~~ 80 (595)
.|+..|+. +|+.+.+.. + .........++||+..|.+... ...|++++.+ |+.+.+ ...
T Consensus 47 ~i~~~d~~----~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~----------~~~l~~~d~~-g~~~~~~~~~ 110 (314)
T 1pjx_A 47 EILRIDLK----TGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADM----------RLGLLVVQTD-GTFEEIAKKD 110 (314)
T ss_dssp EEEEECTT----TCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEET----------TTEEEEEETT-SCEEECCSBC
T ss_pred EEEEEeCC----CCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEEC----------CCCEEEEeCC-CCEEEEEecc
Confidence 46666665 677666542 1 1124667889999334544432 2379999998 877666 432
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEE
Q 007620 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (595)
Q Consensus 81 ~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (595)
........+..+.++++|+..+.......... .+. .. ... ....|+
T Consensus 111 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~------------------------~~~---~~-~~~------~~~~l~ 156 (314)
T 1pjx_A 111 SEGRRMQGCNDCAFDYEGNLWITAPAGEVAPA------------------------DYT---RS-MQE------KFGSIY 156 (314)
T ss_dssp TTSCBCBCCCEEEECTTSCEEEEECBCBCTTS------------------------CCC---BT-TSS------SCEEEE
T ss_pred CCCccccCCcCEEECCCCCEEEEecCcccccc------------------------ccc---cc-ccC------CCCeEE
Confidence 21100112457889999974333211100000 000 00 000 135688
Q ss_pred EEcCCCCeeecCCC-CeeeeeEEC----CCCCeEEEEEcccCccccccCcccceeEEEEcCC-CceE---EEeccCCCCc
Q 007620 161 LGSLDGTAKDFGTP-AVYTAVEPS----PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLV---RELCDLPPAE 231 (595)
Q Consensus 161 ~~d~~g~~~~lt~~-~~~~~~~~S----pDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~---~~l~~~~~~~ 231 (595)
+++.+++.+.+... .....++|+ |||+.|+++... ...|++++.+ .+.. +.+...+...
T Consensus 157 ~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 224 (314)
T 1pjx_A 157 CFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP------------TKKLWSYDIKGPAKIENKKVWGHIPGTH 224 (314)
T ss_dssp EECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT------------TTEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred EECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECC------------CCeEEEEECCCCCccccceEEEECCCCC
Confidence 88877655544221 223467899 999988877532 2368888865 3432 1222221100
Q ss_pred cCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCC
Q 007620 232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDS 310 (595)
Q Consensus 232 ~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg 310 (595)
. .....+.+.++|. |+.... ..+.+++++. +.++.. .+.........+.+++||
T Consensus 225 ~---------~~p~~i~~d~~G~--l~v~~~-----------~~~~i~~~d~---~~g~~~~~~~~~~~~~~~i~~~~dg 279 (314)
T 1pjx_A 225 E---------GGADGMDFDEDNN--LLVANW-----------GSSHIEVFGP---DGGQPKMRIRCPFEKPSNLHFKPQT 279 (314)
T ss_dssp S---------CEEEEEEEBTTCC--EEEEEE-----------TTTEEEEECT---TCBSCSEEEECSSSCEEEEEECTTS
T ss_pred C---------CCCCceEECCCCC--EEEEEc-----------CCCEEEEEcC---CCCcEeEEEeCCCCCceeEEECCCC
Confidence 0 0122466777775 443311 1235666674 312332 222222345677889999
Q ss_pred cEEEEEEeecccceEEEEEeCCC
Q 007620 311 LALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 311 ~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
..|+.... ....|++++++.
T Consensus 280 ~~l~v~~~---~~~~l~~~~~~~ 299 (314)
T 1pjx_A 280 KTIFVTEH---ENNAVWKFEWQR 299 (314)
T ss_dssp SEEEEEET---TTTEEEEEECSS
T ss_pred CEEEEEeC---CCCeEEEEeCCC
Confidence 85444321 123788888765
No 209
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.61 E-value=0.05 Score=53.23 Aligned_cols=185 Identities=11% Similarity=0.074 Sum_probs=106.1
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCC----CceEecccCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET----GEAKPLFESP 81 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~----g~~~~lt~~~ 81 (595)
.|...||. +++...+- +.......+.|++++++|+|+-. ....|+++++++ .....+....
T Consensus 11 ~I~~i~~~----~~~~~~~~--~~~~~p~g~~~d~~~~~ly~~D~---------~~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 11 EVRKMTLD----RSEYTSLI--PNLRNVVALDTEVASNRIYWSDL---------SQRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp SEEEEETT----SCCCEEEE--CSCSSEEEEEEETTTTEEEEEET---------TTTEEEEEEC--------CEEEECSS
T ss_pred eEEEEECC----CcceEehh--cCCCceEEEEEEeCCCEEEEEEC---------CCCcEEEEECCCCCCCcccEEEEeCC
Confidence 46666776 45444443 23335778999999988877642 347899999886 2333332111
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEE
Q 007620 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (595)
Q Consensus 82 ~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (595)
- .....+++.+.+..|+++-. ....|.+
T Consensus 76 ~----~~p~glavd~~~~~ly~~d~------------------------------------------------~~~~I~~ 103 (316)
T 1ijq_A 76 I----QAPDGLAVDWIHSNIYWTDS------------------------------------------------VLGTVSV 103 (316)
T ss_dssp C----SCCCEEEEETTTTEEEEEET------------------------------------------------TTTEEEE
T ss_pred C----CCcCEEEEeecCCeEEEEEC------------------------------------------------CCCEEEE
Confidence 0 02346777777777777511 1235667
Q ss_pred EcCCCC-eeecCCC--CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccc
Q 007620 162 GSLDGT-AKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (595)
Q Consensus 162 ~d~~g~-~~~lt~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~ 238 (595)
++++|. .+.+... .....+++.|++.+|+++.... ...|++++++|...+.+.....
T Consensus 104 ~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~-----------~~~I~~~~~dG~~~~~~~~~~~--------- 163 (316)
T 1ijq_A 104 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENI--------- 163 (316)
T ss_dssp EETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS-----------SCEEEEEETTSCCEEEEECSSC---------
T ss_pred EeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC-----------CCeEEEEcCCCCCeEEEEECCC---------
Confidence 777663 3333221 2345788999888888875321 1378999998876665532211
Q ss_pred ccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecc
Q 007620 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH 295 (595)
Q Consensus 239 ~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~ 295 (595)
..+..+.+.+++. .||+... ..+.++.++. +|...+.+.
T Consensus 164 ---~~P~gla~d~~~~-~lY~~D~-----------~~~~I~~~d~---dg~~~~~~~ 202 (316)
T 1ijq_A 164 ---QWPNGITLDLLSG-RLYWVDS-----------KLHSISSIDV---NGGNRKTIL 202 (316)
T ss_dssp ---SCEEEEEEETTTT-EEEEEET-----------TTTEEEEEET---TSCSCEEEE
T ss_pred ---CCceEEEEeccCC-EEEEEEC-----------CCCeEEEEec---CCCceEEEe
Confidence 1123578888776 4877631 1345666675 554444443
No 210
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.60 E-value=0.076 Score=53.60 Aligned_cols=168 Identities=12% Similarity=0.072 Sum_probs=96.5
Q ss_pred ecceEEEEcCCC-CeeecCC-CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCcc
Q 007620 155 TTAQLVLGSLDG-TAKDFGT-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (595)
Q Consensus 155 ~~~~l~~~d~~g-~~~~lt~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~ 232 (595)
....|.++++++ +...+.. ......++|.+.+..|+++... ...|++++++++..+.+.....
T Consensus 94 ~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~--- 158 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGL--- 158 (386)
T ss_dssp CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCCEEEEECSSC---
T ss_pred cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCC------------CCcEEEEecCCCCcEEEEeCCC---
Confidence 456788999965 5554433 2345688999988899888543 2379999998876555432211
Q ss_pred CCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccC-ccccceeecCCCc
Q 007620 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSL 311 (595)
Q Consensus 233 ~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~-~~~~~~~wspDg~ 311 (595)
..+..+...+.+. .||+... ....+.+++. +|...+.+.... .....+++.|++.
T Consensus 159 ---------~~p~glavd~~~g-~lY~~d~-----------~~~~I~~~~~---dg~~~~~l~~~~l~~P~giavdp~~g 214 (386)
T 3v65_B 159 ---------ESPGGLAVDWVHD-KLYWTDS-----------GTSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEG 214 (386)
T ss_dssp ---------SCCCCEEEETTTT-EEEEEET-----------TTTEEEECBT---TSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred ---------CCccEEEEEeCCC-eEEEEcC-----------CCCeEEEEeC---CCCceEEeecCCCCCCcEEEEEcCCC
Confidence 1123455554443 4777521 1235666665 543434443322 2345567777665
Q ss_pred EEEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 312 ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 312 ~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
.|++..+.. ..+|+++++++. ..+.+...... .|. .+.++++++.||+..
T Consensus 215 ~ly~td~~~--~~~I~r~~~dG~--~~~~~~~~~~~----~Pn--Glavd~~~~~lY~aD 264 (386)
T 3v65_B 215 TIYWTDWGN--TPRIEASSMDGS--GRRIIADTHLF----WPN--GLTIDYAGRRMYWVD 264 (386)
T ss_dssp EEEEEECSS--SCEEEEEETTSC--SCEEEECSSCS----CEE--EEEEEGGGTEEEEEE
T ss_pred eEEEeccCC--CCEEEEEeCCCC--CcEEEEECCCC----Cee--eEEEeCCCCEEEEEE
Confidence 555443321 258999999883 44555432221 011 167887788888775
No 211
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.55 E-value=0.048 Score=54.27 Aligned_cols=185 Identities=11% Similarity=0.098 Sum_probs=108.9
Q ss_pred eEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCccccccccccccc
Q 007620 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (595)
Q Consensus 62 ~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (595)
..|+.+++++.+...+..... ....+.|.+.+..|+++-.
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~-----~~~~l~~d~~~~~ly~~D~----------------------------------- 92 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLE-----NAIALDFHHRRELVFWSDV----------------------------------- 92 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCS-----CEEEEEEETTTTEEEEEET-----------------------------------
T ss_pred cceEEEeCCCCeeEEeecCCC-----ceEEEEEeccccEEEEEec-----------------------------------
Confidence 568999998777666543222 3457899988888888611
Q ss_pred ccCcCCccceEEeecceEEEEcCCC-CeeecCCC--CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC
Q 007620 142 LKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (595)
Q Consensus 142 ~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~lt~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g 218 (595)
....|++++++| ..+.+... .....+++.+.+..|+++... ...|++++++|
T Consensus 93 -------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~------------~~~I~~~~~dG 147 (349)
T 3v64_C 93 -------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG------------TSRIEVANLDG 147 (349)
T ss_dssp -------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETTS
T ss_pred -------------cCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCC------------CCeEEEEcCCC
Confidence 023567777755 33433222 123467888888888888542 23788899887
Q ss_pred ceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccC
Q 007620 219 KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD 298 (595)
Q Consensus 219 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~ 298 (595)
...+.+..... ..+..+...|++. .|||... + ....|+.++. +|...+.+....
T Consensus 148 ~~~~~l~~~~l------------~~P~~iavdp~~g-~ly~td~---~-------~~~~I~r~~~---dG~~~~~~~~~~ 201 (349)
T 3v64_C 148 AHRKVLLWQSL------------EKPRAIALHPMEG-TIYWTDW---G-------NTPRIEASSM---DGSGRRIIADTH 201 (349)
T ss_dssp CSCEEEECTTC------------SCEEEEEEETTTT-EEEEEEC---S-------SSCEEEEEET---TSCSCEESCCSS
T ss_pred CceEEEEeCCC------------CCcceEEEecCcC-eEEEecc---C-------CCCEEEEEeC---CCCCcEEEEECC
Confidence 76555432211 1123566677654 4777532 1 1245676675 554444443322
Q ss_pred -ccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEe
Q 007620 299 -LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (595)
Q Consensus 299 -~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~ 342 (595)
.....++|++++..|++... ....|+.+++++. ..+.+.
T Consensus 202 ~~~PnGla~d~~~~~lY~aD~---~~~~I~~~~~dG~--~~~~~~ 241 (349)
T 3v64_C 202 LFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGS--HRKAVI 241 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC--SCEEEE
T ss_pred CCCcceEEEeCCCCEEEEEEC---CCCEEEEEeCCCC--ceEEEE
Confidence 23456889987766555432 3348999999873 444443
No 212
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.51 E-value=0.0056 Score=64.48 Aligned_cols=121 Identities=13% Similarity=0.096 Sum_probs=71.1
Q ss_pred ccceEEcc-----CCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEE-e-cCCcEEEEEe
Q 007620 33 INFVSWSP-----DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW-V-NNSTLLIFTI 105 (595)
Q Consensus 33 ~~~~~~SP-----DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~W-s-pdg~~l~~~~ 105 (595)
..+|..|. ||++| |+.. .....|.++|+++.+..+++..+.+. ....+.+ + ||+++|+...
T Consensus 87 ~hh~~~s~t~g~~DG~~l-fVnd--------~~~~rVavIdl~t~~~~~ii~ip~g~---~phg~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 87 LHHVHMSFTEGKYDGRFL-FMND--------KANTRVARVRCDVMKCDAILEIPNAK---GIHGLRPQKWPRSNYVFCNG 154 (595)
T ss_dssp BCCEEEEEETTEEEEEEE-EEEE--------TTTTEEEEEETTTTEEEEEEECSSCC---SEEEEEECCSSBCSEEEEEE
T ss_pred CCccccCCCCCCcCCCEE-EEEc--------CCCCEEEEEECCCceEeeEEeCCCCC---CCcceeeeecCCCcEEEEec
Confidence 44588898 99875 5543 34678999999999877765544321 3446676 5 9999987753
Q ss_pred cCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC-CC-eeecCCCCeeeeeEEC
Q 007620 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GT-AKDFGTPAVYTAVEPS 183 (595)
Q Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~-~~~lt~~~~~~~~~~S 183 (595)
..... + ..+|+. .+ . .++ -...+-++|.+ .+ ..+|.-+.....+..|
T Consensus 155 ~~~~p-------~--------~~dg~~----l~-~-----~~~------~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~s 203 (595)
T 1fwx_A 155 EDETP-------L--------VNDGTN----ME-D-----VAN------YVNVFTAVDADKWEVAWQVLVSGNLDNCDAD 203 (595)
T ss_dssp CSCEE-------S--------SCSSSS----TT-C-----GGG------EEEEEEEEETTTTEEEEEEEESSCCCCEEEC
T ss_pred ccccc-------c--------CCCCcc----cc-c-----ccc------cCceEEEEECCCCeEEEEEEeCCCccceEEC
Confidence 21000 0 011210 00 0 001 13456778884 33 3344332233467899
Q ss_pred CCCCeEEEEEccc
Q 007620 184 PDQKYVLITSMHR 196 (595)
Q Consensus 184 pDg~~l~~~~~~~ 196 (595)
|||++++++..+.
T Consensus 204 pdGk~~~vt~~~s 216 (595)
T 1fwx_A 204 YEGKWAFSTSYNS 216 (595)
T ss_dssp SSSSEEEEEESCT
T ss_pred CCCCEEEEEecCc
Confidence 9999999887553
No 213
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.0087 Score=61.39 Aligned_cols=52 Identities=2% Similarity=0.136 Sum_probs=34.5
Q ss_pred ceEEEEcC-CCCe-eecCC---CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE
Q 007620 157 AQLVLGSL-DGTA-KDFGT---PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (595)
Q Consensus 157 ~~l~~~d~-~g~~-~~lt~---~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~ 221 (595)
..|.++|+ +++. ..+.. ...+..++|+|++++|+....+ ..|.+||+..++.
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-------------g~i~iwd~~~~~~ 248 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-------------GIIDIWDIRFNVL 248 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-------------SCEEEEETTTTEE
T ss_pred CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-------------CeEEEEEcCCccE
Confidence 35666777 4543 33332 2356789999999998877642 3688999886554
No 214
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.50 E-value=0.043 Score=51.74 Aligned_cols=193 Identities=11% Similarity=-0.024 Sum_probs=102.3
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
......++|||+ |++ +. . ...|++++.+++....+..... .....+.++++|+ |++...
T Consensus 68 ~p~~i~~~~~g~-l~v-~~--------~-~~~i~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g~-l~v~~~----- 126 (270)
T 1rwi_B 68 QPQGLAVDGAGT-VYV-TD--------F-NNRVVTLAAGSNNQTVLPFDGL----NYPEGLAVDTQGA-VYVADR----- 126 (270)
T ss_dssp SCCCEEECTTCC-EEE-EE--------T-TTEEEEECTTCSCCEECCCCSC----SSEEEEEECTTCC-EEEEEG-----
T ss_pred CcceeEECCCCC-EEE-Ec--------C-CCEEEEEeCCCceEeeeecCCc----CCCcceEECCCCC-EEEEEC-----
Confidence 466789999998 444 32 1 3578999988766554421110 1245678888887 444310
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCC-CeeecCCC--CeeeeeEECCCCCe
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKY 188 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~lt~~--~~~~~~~~SpDg~~ 188 (595)
....|++++... ........ .....++++|+|+
T Consensus 127 -------------------------------------------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~- 162 (270)
T 1rwi_B 127 -------------------------------------------GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN- 162 (270)
T ss_dssp -------------------------------------------GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-
T ss_pred -------------------------------------------CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-
Confidence 012345554422 22221111 1234788999997
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCc
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (595)
|+++... ...|+++|.+++.......... ..+..+.+.++|. |+....
T Consensus 163 l~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~------------~~p~~i~~d~~g~--l~v~~~------ 210 (270)
T 1rwi_B 163 VYVTDTD------------NNRVVKLEAESNNQVVLPFTDI------------TAPWGIAVDEAGT--VYVTEH------ 210 (270)
T ss_dssp EEEEEGG------------GTEEEEECTTTCCEEECCCSSC------------CSEEEEEECTTCC--EEEEET------
T ss_pred EEEEECC------------CCEEEEEecCCCceEeecccCC------------CCceEEEECCCCC--EEEEEC------
Confidence 6665432 2378899988765544321110 1123466677764 554311
Q ss_pred ccccCCcceEEeccCCCCCCCCceeccccC-ccccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 269 ~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
....+++++. .+.....+.... .....+.+++||..++.+. ....|.++++..
T Consensus 211 -----~~~~v~~~~~---~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~----~~~~v~~~~~~~ 264 (270)
T 1rwi_B 211 -----NTNQVVKLLA---GSTTSTVLPFTGLNTPLAVAVDSDRTVYVADR----GNDRVVKLTSLE 264 (270)
T ss_dssp -----TTSCEEEECT---TCSCCEECCCCSCSCEEEEEECTTCCEEEEEG----GGTEEEEECCCG
T ss_pred -----CCCcEEEEcC---CCCcceeeccCCCCCceeEEECCCCCEEEEEC----CCCEEEEEcCCC
Confidence 1234566664 332322222111 2345678889987554432 233788887765
No 215
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.0034 Score=66.44 Aligned_cols=140 Identities=11% Similarity=0.012 Sum_probs=74.3
Q ss_pred eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCce-E-EEeccCCCCccCCccccccccCCCCc--eeec
Q 007620 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-V-RELCDLPPAEDIPVCYNSVREGMRSI--SWRA 251 (595)
Q Consensus 176 ~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~--~wsp 251 (595)
.+..++|+|++ .|+..+. ...+.+||+.++. . ..+... ...+..+ .|++
T Consensus 268 ~v~sv~~s~~~-~lasgs~-------------DgtV~lWD~~~~~~~~~~~~~H-------------~~~V~sv~~~~s~ 320 (524)
T 2j04_B 268 LITTFDFLSPT-TVVCGFK-------------NGFVAEFDLTDPEVPSFYDQVH-------------DSYILSVSTAYSD 320 (524)
T ss_dssp CEEEEEESSSS-EEEEEET-------------TSEEEEEETTBCSSCSEEEECS-------------SSCEEEEEEECCT
T ss_pred CEEEEEecCCC-eEEEEeC-------------CCEEEEEECCCCCCceEEeecc-------------cccEEEEEEEcCC
Confidence 45689999875 5655543 2378899987542 1 112111 1112344 4677
Q ss_pred CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCc-eeccc-cC-ccccceeecCCCcEEEEEEeecccceEEEE
Q 007620 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHK-LD-LRFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (595)
Q Consensus 252 dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~-~~l~~-~~-~~~~~~~wspDg~~l~~~~~~~~~~~~L~~ 328 (595)
+|...|+-. .....+.+||+ ..++. ..+.. .. ..+..+.|+||+..++.... ++ .+.+
T Consensus 321 ~g~~~laS~------------S~D~tvklWD~---~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~--d~--tv~l 381 (524)
T 2j04_B 321 FEDTVVSTV------------AVDGYFYIFNP---KDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDG--AS--SLRA 381 (524)
T ss_dssp TSCCEEEEE------------ETTSEEEEECG---GGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECS--SS--EEEE
T ss_pred CCCeEEEEe------------ccCCeEEEEEC---CCCCcccccccccccCcccceEeCCCcCeEEEeCC--CC--cEEE
Confidence 763223222 12345677775 32121 12221 11 23567899999987766432 22 4666
Q ss_pred EeCCCCCCCcEEEeec--ccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 329 VCPGSKDVAPRVLFDR--VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 329 ~d~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
+|+.++ .....+..+ .+.. +.|+|+|+.|+...
T Consensus 382 wd~~~~-~~~~~l~gH~~~V~s---------va~Sp~g~~l~Sgs 416 (524)
T 2j04_B 382 VPSRAA-FAVHPLVSRETTITA---------IGVSRLHPMVLAGS 416 (524)
T ss_dssp EETTCT-TCCEEEEECSSCEEE---------EECCSSCCBCEEEE
T ss_pred EECccc-ccceeeecCCCceEE---------EEeCCCCCeEEEEE
Confidence 787764 223444332 2333 78999999776544
No 216
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.46 E-value=0.0093 Score=63.10 Aligned_cols=115 Identities=5% Similarity=-0.004 Sum_probs=63.3
Q ss_pred eeeee--EECCCC-CeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeec
Q 007620 176 VYTAV--EPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRA 251 (595)
Q Consensus 176 ~~~~~--~~SpDg-~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wsp 251 (595)
.+..+ .|+|+| +.|+-.+. ...+.+||+.+++. ..+...... .....+.|+|
T Consensus 310 ~V~sv~~~~s~~g~~~laS~S~-------------D~tvklWD~~~~~~~~~~~~~~~~-----------~~v~~v~fsp 365 (524)
T 2j04_B 310 YILSVSTAYSDFEDTVVSTVAV-------------DGYFYIFNPKDIATTKTTVSRFRG-----------SNLVPVVYCP 365 (524)
T ss_dssp CEEEEEEECCTTSCCEEEEEET-------------TSEEEEECGGGHHHHCEEEEECSC-----------CSCCCEEEET
T ss_pred cEEEEEEEcCCCCCeEEEEecc-------------CCeEEEEECCCCCccccccccccc-----------CcccceEeCC
Confidence 34555 689998 55554443 23688999875432 122110000 0124588999
Q ss_pred CCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeC
Q 007620 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (595)
Q Consensus 252 dg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~ 331 (595)
+++. ++.. ...+.+.++|+ ..+.....+......+..+.|||||..|+... .++ .+.++|+
T Consensus 366 ~~~~-l~s~------------~~d~tv~lwd~--~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs--~Dg--tv~lwd~ 426 (524)
T 2j04_B 366 QIYS-YIYS------------DGASSLRAVPS--RAAFAVHPLVSRETTITAIGVSRLHPMVLAGS--ADG--SLIITNA 426 (524)
T ss_dssp TTTE-EEEE------------CSSSEEEEEET--TCTTCCEEEEECSSCEEEEECCSSCCBCEEEE--TTT--EEECCBS
T ss_pred CcCe-EEEe------------CCCCcEEEEEC--cccccceeeecCCCceEEEEeCCCCCeEEEEE--CCC--EEEEEec
Confidence 9874 2211 11235666775 22222344555566778899999998776653 234 4555565
Q ss_pred CC
Q 007620 332 GS 333 (595)
Q Consensus 332 ~~ 333 (595)
..
T Consensus 427 ~~ 428 (524)
T 2j04_B 427 AR 428 (524)
T ss_dssp CS
T ss_pred hH
Confidence 54
No 217
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.44 E-value=0.099 Score=53.05 Aligned_cols=185 Identities=12% Similarity=-0.015 Sum_probs=105.8
Q ss_pred eEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCccccccccccccc
Q 007620 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (595)
Q Consensus 62 ~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (595)
..|..++++++....+..... ....+.|.+.+..|+++-..
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~-----~~~~l~~d~~~~~lywsD~~---------------------------------- 132 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDLS---------------------------------- 132 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCS-----CEEEEEEETTTTEEEEEETT----------------------------------
T ss_pred ceeEEEccCCcceeEeccccC-----cceEEeeeeccCceEEEecC----------------------------------
Confidence 689999998877665543222 34578999988888886210
Q ss_pred ccCcCCccceEEeecceEEEEcCCC-----CeeecCC-C-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEE
Q 007620 142 LKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (595)
Q Consensus 142 ~~~~~~~~~~~~~~~~~l~~~d~~g-----~~~~lt~-~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (595)
...|++++++| ....+.. . .....+++.+.++.|+++... ...|.++
T Consensus 133 --------------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~------------~~~I~~~ 186 (400)
T 3p5b_L 133 --------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSVA 186 (400)
T ss_dssp --------------TTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred --------------CCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECC------------CCeEEEE
Confidence 12455555543 1222222 1 233467777777888877532 2378899
Q ss_pred cCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceec
Q 007620 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (595)
Q Consensus 215 d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l 294 (595)
+++|...+.+..... ..++.+...|.+. .|||... + ....|+.+++ +|...+.+
T Consensus 187 ~~~g~~~~~l~~~~~------------~~P~~iavdp~~g-~ly~td~---~-------~~~~I~~~~~---dG~~~~~~ 240 (400)
T 3p5b_L 187 DTKGVKRKTLFRENG------------SKPRAIVVDPVHG-FMYWTDW---G-------TPAKIKKGGL---NGVDIYSL 240 (400)
T ss_dssp CTTTCSEEEEEECSS------------CCEEEEEEETTTT-EEEEEEC---S-------SSCCEEEEET---TSCSCEEE
T ss_pred eCCCCceEEEEeCCC------------CCcceEEEecccC-eEEEEeC---C-------CCCEEEEEeC---CCCccEEE
Confidence 998876665543211 1123455666544 3776532 1 1134666665 55444444
Q ss_pred cccC-ccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEe
Q 007620 295 HKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (595)
Q Consensus 295 ~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~ 342 (595)
.... .....+++++++..|++.+ .....|+.+|+++ ...+.+.
T Consensus 241 ~~~~l~~P~glavd~~~~~lY~aD---~~~~~I~~~d~dG--~~~~~~~ 284 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNG--GNRKTIL 284 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTS--CCCEEEE
T ss_pred EECCCCceEEEEEEeCCCEEEEEE---CCCCEEEEEeCCC--CccEEEE
Confidence 3322 3345678888877665543 2345899999988 3445553
No 218
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.42 E-value=0.03 Score=55.14 Aligned_cols=120 Identities=10% Similarity=0.097 Sum_probs=61.0
Q ss_pred eeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC-CceEEEeccCCCCccCCccccccccCCCCceeecCCCe
Q 007620 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (595)
Q Consensus 177 ~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~ 255 (595)
...++++|++..|+++... ...|.+++.+ +...+.+...... .....+.++| +
T Consensus 198 p~gia~d~~~g~l~v~d~~------------~~~I~~~~~~~G~~~~~~~~~~~~-----------~~~~~~~~~p-g-- 251 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRE------------NGRIQCFKTDTKEFVREIKHASFG-----------RNVFAISYIP-G-- 251 (329)
T ss_dssp EEEEEEETTTTEEEEEETT------------TTEEEEEETTTCCEEEEECCTTTT-----------TCEEEEEEET-T--
T ss_pred CcEEEEECCCCEEEEEECC------------CCEEEEEECCCCcEEEEEeccccC-----------CCcceeeecC-C--
Confidence 3578999997778777532 2478899988 5544554321100 1122455666 2
Q ss_pred eEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccc----cCccccceeecCCCcEEEEEEeecccceEEEEEeC
Q 007620 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK----LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (595)
Q Consensus 256 ~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~----~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~ 331 (595)
+++. .++. ..........+++++. ..++...... .......+.++|||..++.+. ...+|+++++
T Consensus 252 -~~~~--~~g~-~~v~~~~~~~v~~~~~---~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~----~~~~I~~~~~ 320 (329)
T 3fvz_A 252 -FLFA--VNGK-PYFGDQEPVQGFVMNF---SSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA----HTNTVWKFTL 320 (329)
T ss_dssp -EEEE--EECC-CCTTCSCCCCEEEEET---TTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES----SSCCEEEEEE
T ss_pred -EEEE--eCCC-EEeccCCCcEEEEEEc---CCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC----CCCEEEEEeC
Confidence 2222 1211 1110112235666664 2234333221 112345678899995555543 2336777777
Q ss_pred CC
Q 007620 332 GS 333 (595)
Q Consensus 332 ~~ 333 (595)
++
T Consensus 321 ~~ 322 (329)
T 3fvz_A 321 TE 322 (329)
T ss_dssp EE
T ss_pred Cc
Confidence 65
No 219
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.0097 Score=67.56 Aligned_cols=110 Identities=9% Similarity=0.046 Sum_probs=62.2
Q ss_pred CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccCCccccccccCCCCceeecCC
Q 007620 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (595)
Q Consensus 175 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg 253 (595)
..+..++|+| |++|+.... ...|.+||+.+++. ..+. .+ .....+.|+|++
T Consensus 59 ~~V~~l~fsp-g~~L~S~s~-------------D~~v~lWd~~~~~~~~~~~-~~-------------~~V~~v~~sp~g 110 (902)
T 2oaj_A 59 SAIKEMRFVK-GIYLVVINA-------------KDTVYVLSLYSQKVLTTVF-VP-------------GKITSIDTDASL 110 (902)
T ss_dssp CCEEEEEEET-TTEEEEEET-------------TCEEEEEETTTCSEEEEEE-CS-------------SCEEEEECCTTC
T ss_pred CCEEEEEEcC-CCEEEEEEC-------------cCeEEEEECCCCcEEEEEc-CC-------------CCEEEEEECCCC
Confidence 3467899999 886666543 23789999886543 3332 11 113457889998
Q ss_pred CeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCcee------------ccccCccccceeecCCCc-EEEEEEeec
Q 007620 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI------------LHKLDLRFRSVSWCDDSL-ALVNETWYK 320 (595)
Q Consensus 254 ~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~------------l~~~~~~~~~~~wspDg~-~l~~~~~~~ 320 (595)
+. |+.. .....+.+||+ .+++... +......+..+.|+|++. .++... .
T Consensus 111 ~~-l~sg------------s~dg~V~lwd~---~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~--~ 172 (902)
T 2oaj_A 111 DW-MLIG------------LQNGSMIVYDI---DRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY--E 172 (902)
T ss_dssp SE-EEEE------------ETTSCEEEEET---TTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC--S
T ss_pred CE-EEEE------------cCCCcEEEEEC---CCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe--C
Confidence 73 3322 11235666775 3333211 111234577899999753 444432 2
Q ss_pred ccceEEEEEeCCC
Q 007620 321 TSQTRTWLVCPGS 333 (595)
Q Consensus 321 ~~~~~L~~~d~~~ 333 (595)
++ .+ ++|+.+
T Consensus 173 dg--~v-lWd~~~ 182 (902)
T 2oaj_A 173 YV--TL-TYSLVE 182 (902)
T ss_dssp SC--EE-EEETTT
T ss_pred CC--cE-EEECCC
Confidence 23 46 778877
No 220
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.41 E-value=0.018 Score=54.70 Aligned_cols=198 Identities=8% Similarity=-0.025 Sum_probs=105.2
Q ss_pred ccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~ 112 (595)
.....|+||| +| |++... .+.+.|.++|+++|+..+-..... .......+.+|+.|+.+..
T Consensus 23 ~~Gl~~~~dg-~L-yvstg~------~~~s~v~~iD~~tg~v~~~i~l~~-----~~fgeGi~~~g~~lyv~t~------ 83 (266)
T 2iwa_A 23 TQGLVYAEND-TL-FESTGL------YGRSSVRQVALQTGKVENIHKMDD-----SYFGEGLTLLNEKLYQVVW------ 83 (266)
T ss_dssp EEEEEECSTT-EE-EEEECS------TTTCEEEEEETTTCCEEEEEECCT-----TCCEEEEEEETTEEEEEET------
T ss_pred cccEEEeCCC-eE-EEECCC------CCCCEEEEEECCCCCEEEEEecCC-----CcceEEEEEeCCEEEEEEe------
Confidence 4678999996 54 544321 245889999999998655433222 1112233344666666521
Q ss_pred CCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC-eeecCCCCeeeeeEECCCCCeEE
Q 007620 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVL 190 (595)
Q Consensus 113 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~-~~~lt~~~~~~~~~~SpDg~~l~ 190 (595)
....++++|. +.+ ...+..+ .-....+++||++|+
T Consensus 84 ------------------------------------------~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~ 120 (266)
T 2iwa_A 84 ------------------------------------------LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILY 120 (266)
T ss_dssp ------------------------------------------TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEE
T ss_pred ------------------------------------------cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEE
Confidence 1246778887 453 3344322 112345778999988
Q ss_pred EEEcccCccccccCcccceeEEEEcCCCce-EEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcc
Q 007620 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (595)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~ 269 (595)
++. . ...|+++|.++.+ .+.+.-... ..|. .....+.|. ||+ ||.- .
T Consensus 121 vs~-g------------s~~l~viD~~t~~v~~~I~Vg~~--~~p~------~~~nele~~-dg~--lyvn-~------- 168 (266)
T 2iwa_A 121 GSD-G------------TSILYEIDPHTFKLIKKHNVKYN--GHRV------IRLNELEYI-NGE--VWAN-I------- 168 (266)
T ss_dssp EEC-S------------SSEEEEECTTTCCEEEEEECEET--TEEC------CCEEEEEEE-TTE--EEEE-E-------
T ss_pred EEC-C------------CCeEEEEECCCCcEEEEEEECCC--Cccc------ccceeEEEE-CCE--EEEe-c-------
Confidence 763 2 2379999988644 344321100 0000 001134555 542 5432 1
Q ss_pred cccCCcceEEeccCCCCCCCCceeccccC--------------ccccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLD--------------LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 270 ~~~~~~~~~~~~d~~~~~g~~~~~l~~~~--------------~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
...+.+.++|. .+ ++........ .....++|+|++..++... ..+.+|+.+++..
T Consensus 169 ---~~~~~V~vID~--~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg---k~~~~v~~i~l~~ 237 (266)
T 2iwa_A 169 ---WQTDCIARISA--KD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG---KLWPKLFEIKLHL 237 (266)
T ss_dssp ---TTSSEEEEEET--TT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE---TTCSEEEEEEEEE
T ss_pred ---CCCCeEEEEEC--CC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC---CCCCeEEEEEEec
Confidence 12346777785 34 4544322211 1235688999987643322 1345788888765
No 221
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.38 E-value=0.062 Score=51.29 Aligned_cols=132 Identities=9% Similarity=0.124 Sum_probs=71.7
Q ss_pred eEEEEcCCCCe-eecCCC--CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCC
Q 007620 158 QLVLGSLDGTA-KDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (595)
Q Consensus 158 ~l~~~d~~g~~-~~lt~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~ 234 (595)
.|++++.+|+. +.+... .....++++|+|+ |+++... ...|+++|.++.....+..... .
T Consensus 101 ~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~~---~- 163 (286)
T 1q7f_A 101 QIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECK------------VMRVIIFDQNGNVLHKFGCSKH---L- 163 (286)
T ss_dssp EEEEECTTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETT------------TTEEEEECTTSCEEEEEECTTT---C-
T ss_pred EEEEECCCCcEEEEecCccCCCceEEEEeCCCC-EEEEECC------------CCEEEEEcCCCCEEEEeCCCCc---c-
Confidence 45666665542 333222 2345789999997 5555432 2378899987766655532100 0
Q ss_pred ccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccC--ccccceeecCCCcE
Q 007620 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFRSVSWCDDSLA 312 (595)
Q Consensus 235 ~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~--~~~~~~~wspDg~~ 312 (595)
..+..+.+.++|. ++.... ....+++++. ++.....+.... .....+.+++||..
T Consensus 164 -------~~p~~i~~~~~g~--l~v~~~-----------~~~~i~~~~~---~g~~~~~~~~~g~~~~p~~i~~d~~G~l 220 (286)
T 1q7f_A 164 -------EFPNGVVVNDKQE--IFISDN-----------RAHCVKVFNY---EGQYLRQIGGEGITNYPIGVGINSNGEI 220 (286)
T ss_dssp -------SSEEEEEECSSSE--EEEEEG-----------GGTEEEEEET---TCCEEEEESCTTTSCSEEEEEECTTCCE
T ss_pred -------CCcEEEEECCCCC--EEEEEC-----------CCCEEEEEcC---CCCEEEEEccCCccCCCcEEEECCCCCE
Confidence 1123567778765 544311 1235666674 432222232111 23456788999976
Q ss_pred EEEEEeecccce-EEEEEeCCC
Q 007620 313 LVNETWYKTSQT-RTWLVCPGS 333 (595)
Q Consensus 313 l~~~~~~~~~~~-~L~~~d~~~ 333 (595)
++... ... .|.++|.++
T Consensus 221 ~v~~~----~~~~~i~~~~~~g 238 (286)
T 1q7f_A 221 LIADN----HNNFNLTIFTQDG 238 (286)
T ss_dssp EEEEC----SSSCEEEEECTTS
T ss_pred EEEeC----CCCEEEEEECCCC
Confidence 66543 222 788888765
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.34 E-value=0.17 Score=51.39 Aligned_cols=59 Identities=8% Similarity=-0.023 Sum_probs=33.8
Q ss_pred eeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEE-EeccCCCCccCCccccccccCCCCceeecCCC
Q 007620 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (595)
Q Consensus 178 ~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (595)
..+..+||| |+++....+. ...+..+.++|.++.++. .+....... .-...+.|+|+++
T Consensus 141 h~~~~~pdG--i~Vs~~g~~~------g~~~g~v~vlD~~T~~v~~~~~~~~~~~----------~~~Yd~~~~p~~~ 200 (462)
T 2ece_A 141 HTVHCGPDA--IYISALGNEE------GEGPGGILMLDHYSFEPLGKWEIDRGDQ----------YLAYDFWWNLPNE 200 (462)
T ss_dssp EEEEECSSC--EEEEEEEETT------SCSCCEEEEECTTTCCEEEECCSBCTTC----------CCCCCEEEETTTT
T ss_pred cceeECCCe--EEEEcCCCcC------CCCCCeEEEEECCCCeEEEEEccCCCCc----------cccceEEECCCCC
Confidence 466789999 6666544321 123468999998866543 332110000 0022578899998
No 223
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.33 E-value=0.1 Score=52.90 Aligned_cols=185 Identities=11% Similarity=0.071 Sum_probs=103.3
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCC----ceEecccCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----EAKPLFESP 81 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g----~~~~lt~~~ 81 (595)
.|...+|. ++....+. ..........|++.+++|+|+-. ....|++++++++ ....+....
T Consensus 93 ~I~~i~l~----~~~~~~~~--~~~~~~~~l~~d~~~~~lywsD~---------~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 93 EVRKMTLD----RSEYTSLI--PNLRNVVALDTEVASNRIYWSDL---------SQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp EEEEECTT----SCSCEEEE--CSCSCEEEEEEETTTTEEEEEET---------TTTEEEEEEC------CCCEEEECSS
T ss_pred eeEEEccC----CcceeEec--cccCcceEEeeeeccCceEEEec---------CCCeEEEEEcccCCCCCcceEEEeCC
Confidence 34444554 44444443 23335677899998888877642 3467888888762 233332211
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEE
Q 007620 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (595)
Q Consensus 82 ~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 161 (595)
-. ....++..+.++.|+++-. ....|.+
T Consensus 158 ~~----~p~glavD~~~~~lY~~d~------------------------------------------------~~~~I~~ 185 (400)
T 3p5b_L 158 IQ----APDGLAVDWIHSNIYWTDS------------------------------------------------VLGTVSV 185 (400)
T ss_dssp CS----CEEEEEEETTTTEEEEEET------------------------------------------------TTTEEEE
T ss_pred CC----CcccEEEEecCCceEEEEC------------------------------------------------CCCeEEE
Confidence 00 2335666666666777511 1245777
Q ss_pred EcCCCC-eeecCCC--CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccc
Q 007620 162 GSLDGT-AKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (595)
Q Consensus 162 ~d~~g~-~~~lt~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~ 238 (595)
++++|. .+.+... .....+++.|.+.+|+++.... ...|++++++|...+.+....+
T Consensus 186 ~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~-----------~~~I~~~~~dG~~~~~~~~~~l--------- 245 (400)
T 3p5b_L 186 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENI--------- 245 (400)
T ss_dssp ECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS-----------SCCEEEEETTSCSCEEEECSSC---------
T ss_pred EeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC-----------CCEEEEEeCCCCccEEEEECCC---------
Confidence 888764 3333322 2345788999888888875322 2378899999876665532211
Q ss_pred ccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecc
Q 007620 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH 295 (595)
Q Consensus 239 ~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~ 295 (595)
..+..+.+.+++. .|||... ..+.|+.++. +|...+.+.
T Consensus 246 ---~~P~glavd~~~~-~lY~aD~-----------~~~~I~~~d~---dG~~~~~~~ 284 (400)
T 3p5b_L 246 ---QWPNGITLDLLSG-RLYWVDS-----------KLHSISSIDV---NGGNRKTIL 284 (400)
T ss_dssp ---SCEEEEEEETTTT-EEEEEET-----------TTTEEEEEET---TSCCCEEEE
T ss_pred ---CceEEEEEEeCCC-EEEEEEC-----------CCCEEEEEeC---CCCccEEEE
Confidence 1123577887765 4888631 1245666675 554444444
No 224
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.32 E-value=0.011 Score=60.00 Aligned_cols=58 Identities=12% Similarity=0.083 Sum_probs=36.4
Q ss_pred cccceEEcc--------CCCEEEEEEecccccccCCCceEEEEEECCCCc-eEecccCCCccccccccceEEecCCcEEE
Q 007620 32 KINFVSWSP--------DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-AKPLFESPDICLNAVFGSFVWVNNSTLLI 102 (595)
Q Consensus 32 ~~~~~~~SP--------DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~-~~~lt~~~~~~~~~~~~~~~Wspdg~~l~ 102 (595)
.+....||| ||+.||-.+. ++.-.|| |+.++. ...+..... .+.++.|+|++..++
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~--------D~tv~~W--d~~~~~~~~~~~~~~~-----~v~~v~~~p~~~~~l 202 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGD--------DCTLIIW--RLTDEGPILAGYPLSS-----PGISVQFRPSNPNQL 202 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEET--------TSEEEEE--EEETTEEEEEEEECSS-----CEEEEEEETTEEEEE
T ss_pred ceEEEEEccccccccCCCCCEEEEEEC--------CCeEEEE--ECCCCceeeeecCCCC-----CcEEEEECCCCCceE
Confidence 578899998 8988776553 3444444 765554 333333332 456899999987544
Q ss_pred EE
Q 007620 103 FT 104 (595)
Q Consensus 103 ~~ 104 (595)
.+
T Consensus 203 ~~ 204 (393)
T 4gq1_A 203 IV 204 (393)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 225
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=97.30 E-value=2.5e-05 Score=77.93 Aligned_cols=67 Identities=13% Similarity=0.157 Sum_probs=49.3
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
..+.+++++.||.+|.+++++|.+.. + +.|+||++|+. .... ..+...+.|+++||+|+.
T Consensus 67 ~~~~~~~~~~dg~~i~~~~~~P~~~~--~--~~p~vv~~HG~--------------g~~~--~~~~~~~~l~~~G~~v~~ 126 (337)
T 1vlq_A 67 EAYDVTFSGYRGQRIKGWLLVPKLEE--E--KLPCVVQYIGY--------------NGGR--GFPHDWLFWPSMGYICFV 126 (337)
T ss_dssp EEEEEEEECGGGCEEEEEEEEECCSC--S--SEEEEEECCCT--------------TCCC--CCGGGGCHHHHTTCEEEE
T ss_pred EEEEEEEEcCCCCEEEEEEEecCCCC--C--CccEEEEEcCC--------------CCCC--CCchhhcchhhCCCEEEE
Confidence 78999999999999999999998742 2 34999997742 1111 112334688999999999
Q ss_pred CCCCceee
Q 007620 561 GPSIPIIG 568 (595)
Q Consensus 561 ~~~~~~~~ 568 (595)
++.+..|
T Consensus 127 -~d~rG~g 133 (337)
T 1vlq_A 127 -MDTRGQG 133 (337)
T ss_dssp -ECCTTCC
T ss_pred -ecCCCCC
Confidence 6666555
No 226
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.29 E-value=0.071 Score=51.01 Aligned_cols=81 Identities=10% Similarity=-0.046 Sum_probs=48.9
Q ss_pred eeeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc
Q 007620 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (595)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~ 83 (595)
...|++.|.+ +|+...-.............++|||+.|+ +. ...|+.+|.++....++.....
T Consensus 14 ~~~v~~~d~~----tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~----------~~~V~~~d~~G~~~W~~~~~~~- 76 (276)
T 3no2_A 14 WNKIAIINKD----TKEIVWEYPLEKGWECNSVAATKAGEILF--SY----------SKGAKMITRDGRELWNIAAPAG- 76 (276)
T ss_dssp CSEEEEEETT----TTEEEEEEECCTTCCCCEEEECTTSCEEE--EC----------BSEEEEECTTSCEEEEEECCTT-
T ss_pred CCEEEEEECC----CCeEEEEeCCCccCCCcCeEECCCCCEEE--eC----------CCCEEEECCCCCEEEEEcCCCC-
Confidence 4568888887 66554333222212477889999998665 22 2458888984333444432111
Q ss_pred cccccccceEEecCCcEEEEE
Q 007620 84 CLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~ 104 (595)
..+.+..+++||+.|+..
T Consensus 77 ---~~~~~~~~~~dG~~lv~~ 94 (276)
T 3no2_A 77 ---CEMQTARILPDGNALVAW 94 (276)
T ss_dssp ---CEEEEEEECTTSCEEEEE
T ss_pred ---ccccccEECCCCCEEEEe
Confidence 134567888999977664
No 227
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.17 E-value=0.21 Score=53.93 Aligned_cols=181 Identities=10% Similarity=0.022 Sum_probs=105.0
Q ss_pred eEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCccccccccccccc
Q 007620 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (595)
Q Consensus 62 ~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (595)
.+|..+++++.+...+...... .....+.|.+++..|+++-.
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~---~~~~~l~~d~~~~~lywtD~----------------------------------- 56 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGV---KEASALDFDVTDNRIYWTDI----------------------------------- 56 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSC---SCEEEEEEETTTTEEEEEET-----------------------------------
T ss_pred CcEEEEECCCCCcceEEEcCCC---CceEEEEEECCCCEEEEEEC-----------------------------------
Confidence 6899999987654333222211 02347889998888888611
Q ss_pred ccCcCCccceEEeecceEEEEcCCC-CeeecCCCC--eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC
Q 007620 142 LKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTPA--VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (595)
Q Consensus 142 ~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~lt~~~--~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g 218 (595)
....|++++++| ..+.+...+ ....+++.+.++.|+++... ...|.+++++|
T Consensus 57 -------------~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~------------~~~I~v~~~dG 111 (628)
T 4a0p_A 57 -------------SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTG------------TNRIEVSKLDG 111 (628)
T ss_dssp -------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETTS
T ss_pred -------------CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECC------------CCEEEEEecCC
Confidence 023566677765 333332222 23467777788888887432 24788999988
Q ss_pred ceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccC
Q 007620 219 KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD 298 (595)
Q Consensus 219 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~ 298 (595)
...+.+....+ ..++.+...|... .|||..+ + ....|+..+. +|...+.+...-
T Consensus 112 ~~~~~l~~~~l------------~~P~~iavdp~~G-~lY~tD~---g-------~~~~I~r~~~---dG~~~~~l~~~~ 165 (628)
T 4a0p_A 112 QHRQVLVWKDL------------DSPRALALDPAEG-FMYWTEW---G-------GKPKIDRAAM---DGSERTTLVPNV 165 (628)
T ss_dssp TTCEEEECSSC------------CCEEEEEEETTTT-EEEEEEC---S-------SSCEEEEEET---TSCSCEEEECSC
T ss_pred CcEEEEEeCCC------------CCcccEEEccCCC-eEEEeCC---C-------CCCEEEEEeC---CCCceEEEECCC
Confidence 76665542211 1134566666433 4777532 1 1235666665 555555554433
Q ss_pred ccccceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 299 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 299 ~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
.....+.+++++..|+... .....|+.+|+++.
T Consensus 166 ~~P~GlalD~~~~~LY~aD---~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTD---LDTNLIESSNMLGL 198 (628)
T ss_dssp SSEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC
T ss_pred CCcceEEEccccCEEEEEE---CCCCEEEEEcCCCC
Confidence 3445677788776655543 23448999999884
No 228
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.16 E-value=0.12 Score=50.79 Aligned_cols=159 Identities=12% Similarity=0.116 Sum_probs=73.8
Q ss_pred eeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCee
Q 007620 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (595)
Q Consensus 177 ~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~ 256 (595)
...++++|++..|+++.... ...|.+++.++.....+.......... .+.-..+..+.+.|++. .
T Consensus 145 P~~ia~~~~~g~lyv~d~~~-----------~~~I~~~~~~g~~~~~~~~~g~~~~~~---~~~~~~p~gia~d~~~g-~ 209 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYC-----------NSRIVQFSPSGKFVTQWGEESSGSSPR---PGQFSVPHSLALVPHLD-Q 209 (329)
T ss_dssp EEEEEECTTTCCEEEEECSS-----------CCEEEEECTTSCEEEEECEECCSSSCC---TTEESCEEEEEEETTTT-E
T ss_pred CcEEEEeCCCCeEEEEeCCC-----------CCeEEEEcCCCCEEEEeccCCCCCCCC---CcccCCCcEEEEECCCC-E
Confidence 35789999555566664211 237889997777666553221000000 00001123567788743 2
Q ss_pred EEEEEeecCCCcccccCCcceEEeccCCCCCCCCcee-ccc--cCccccceeecCCCcEEEEEEe-e--cccceEEEEEe
Q 007620 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK--LDLRFRSVSWCDDSLALVNETW-Y--KTSQTRTWLVC 330 (595)
Q Consensus 257 l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~-l~~--~~~~~~~~~wspDg~~l~~~~~-~--~~~~~~L~~~d 330 (595)
||... . ..+.+.+++. +.|+... +.. .......+.++| +..+..+.. . +.....+++++
T Consensus 210 l~v~d---~--------~~~~I~~~~~---~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~ 274 (329)
T 3fvz_A 210 LCVAD---R--------ENGRIQCFKT---DTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMN 274 (329)
T ss_dssp EEEEE---T--------TTTEEEEEET---TTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEE
T ss_pred EEEEE---C--------CCCEEEEEEC---CCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEE
Confidence 55441 1 1235666674 3233332 211 122334567788 544433321 0 12234688888
Q ss_pred CCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 331 PGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
+.++ +....+.... .....|. .+.++++| .||+..
T Consensus 275 ~~~g--~~~~~~~~~~-~~~~~p~--~ia~~~dG-~lyvad 309 (329)
T 3fvz_A 275 FSSG--EIIDVFKPVR-KHFDMPH--DIVASEDG-TVYIGD 309 (329)
T ss_dssp TTTC--CEEEEECCSS-SCCSSEE--EEEECTTS-EEEEEE
T ss_pred cCCC--eEEEEEcCCC-CccCCee--EEEECCCC-CEEEEE
Confidence 7763 3222221100 0111111 16778888 566654
No 229
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.16 E-value=0.013 Score=64.43 Aligned_cols=185 Identities=12% Similarity=-0.011 Sum_probs=100.3
Q ss_pred eEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCccccccccccccc
Q 007620 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (595)
Q Consensus 62 ~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (595)
..|.++++++++...+..... ....+.|.+++..|+++-..
T Consensus 386 ~~I~~id~~~~~~~~~~~~~~-----~p~gla~d~~~~~Ly~sD~~---------------------------------- 426 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDLS---------------------------------- 426 (699)
T ss_dssp TC-CEECTTSCCEECCSCCCT-----TCCCCEEETTTTEEEECCTT----------------------------------
T ss_pred cceEEEeCCCCcceeeeccCc-----ceEEEccccccCeEEEEecC----------------------------------
Confidence 568888888777655533222 34578999988888885110
Q ss_pred ccCcCCccceEEeecceEEEEcCCC-----CeeecCCCC--eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEE
Q 007620 142 LKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGTPA--VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (595)
Q Consensus 142 ~~~~~~~~~~~~~~~~~l~~~d~~g-----~~~~lt~~~--~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (595)
...|+++++++ ....+.... ....+++.+.+..|+++... ...|+++
T Consensus 427 --------------~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~------------~~~I~v~ 480 (699)
T 1n7d_A 427 --------------QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSVA 480 (699)
T ss_dssp --------------TTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTT------------TSCEEEE
T ss_pred --------------CCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEecc------------CCeEEEE
Confidence 12344555533 112222111 22356777777777766321 2478899
Q ss_pred cCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceec
Q 007620 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (595)
Q Consensus 215 d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l 294 (595)
++++...+.+..... ..++.+++.|++. .|||.. .+ ....|+++++ +|...+.+
T Consensus 481 d~dg~~~~~l~~~~~------------~~P~giavDp~~g-~ly~td---~~-------~~~~I~~~~~---dG~~~~~l 534 (699)
T 1n7d_A 481 DTKGVKRKTLFREQG------------SKPRAIVVDPVHG-FMYWTD---WG-------TPAKIKKGGL---NGVDIYSL 534 (699)
T ss_dssp BSSSCCEEEECCCSS------------CCCCCEECCSSSS-CCEECC---CS-------SSCCEEBCCS---SSCCCCEE
T ss_pred ecCCCceEEEEeCCC------------CCcceEEEccCCC-cEEEcc---cC-------CCCeEEEEeC---CCCCeeEE
Confidence 998877666543211 1123566666544 366541 11 1135666664 44333333
Q ss_pred cccC-ccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEe
Q 007620 295 HKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (595)
Q Consensus 295 ~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~ 342 (595)
.... .....++|+|++..|++.. .....|+++++++ ...+.+.
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD---~~~~~I~~~d~dG--~~~~~~~ 578 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNG--GNRKTIL 578 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEE---TTTTEEEEECSSS--SCCEEEC
T ss_pred EeCCCCCccEEEEeccCCEEEEEe---cCCCeEEEEccCC--CceEEEE
Confidence 3222 2345688999876555443 2345899999987 3445453
No 230
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=97.14 E-value=0.0004 Score=70.97 Aligned_cols=82 Identities=18% Similarity=0.298 Sum_probs=53.0
Q ss_pred CceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCC-------cccCCCCchhHHHh
Q 007620 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN-------EFSGMTPTSSLIFL 552 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~-------~~~~~~~~~~q~la 552 (595)
+..|.++|++.||.+|+|+|++|.+.+ + +.|+||++|+...+ ...+.+.+. .|........+.||
T Consensus 90 ~~~e~v~~~~~~g~~l~~~l~~P~~~~--~--~~P~Vv~~HG~g~~----~~~~~~~~g~~~~~~~~y~~~~~~~a~~la 161 (398)
T 3nuz_A 90 YRLEKWEFYPLPKCVSTFLVLIPDNIN--K--PVPAILCIPGSGGN----KEGLAGEPGIAPKLNDRYKDPKLTQALNFV 161 (398)
T ss_dssp EEEEEEEECCSTTBCEEEEEEEESSCC--S--CEEEEEEECCTTCC----HHHHHTCCCSSSTTCCSTTCTTTCHHHHHH
T ss_pred EEEEEEEEEcCCCcEEEEEEEeCCCCC--C--CccEEEEEcCCCCC----cccccccccccccccccccchHHHHHHHHH
Confidence 368889999999999999999998752 2 45999998864110 000000000 01100013468999
Q ss_pred ccCeEEEeCCCCceeecC
Q 007620 553 ARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 553 ~~GY~Vl~~~~~~~~~~~ 570 (595)
++||+|+. ++.+..|..
T Consensus 162 ~~Gy~Vl~-~D~rG~G~s 178 (398)
T 3nuz_A 162 KEGYIAVA-VDNPAAGEA 178 (398)
T ss_dssp TTTCEEEE-ECCTTSGGG
T ss_pred HCCCEEEE-ecCCCCCcc
Confidence 99999999 777666643
No 231
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.14 E-value=0.19 Score=55.66 Aligned_cols=201 Identities=10% Similarity=0.047 Sum_probs=109.5
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCC----ceEecccCCCccccccccceEEecCCcEEEEEecC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g----~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~ 107 (595)
....+.|++.+.+|+|+-. ....|+++++++. ....+..... .....++..+.++.||++-.
T Consensus 425 ~~~gl~~d~~~~~lY~sD~---------~~~~I~~~~l~g~~~~~~~~~vi~~~l----~~P~GLAvD~~~~~LY~tD~- 490 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDL---------SQRMICSTQLDRAHGVSSYDTVISRDI----QAPDGLAVDWIHSNIYWTDS- 490 (791)
T ss_dssp SEEEEEEETTTTEEEEEET---------TTTEEEEEEC--------CEEEECSSC----SCCCEEEEETTTTEEEEEET-
T ss_pred ceEEEeecccCCeeEEeec---------cceeEEEEeccCCCCCcceeEEEecCC----CCcceeeeeecCCcEEEEec-
Confidence 4667888888888777542 3467888888763 2233322110 02346677777777777511
Q ss_pred CCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCC-eeecCCC--CeeeeeEECC
Q 007620 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSP 184 (595)
Q Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~lt~~--~~~~~~~~Sp 184 (595)
...+|++++++|. .+.|... .....+++.|
T Consensus 491 -----------------------------------------------~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp 523 (791)
T 3m0c_C 491 -----------------------------------------------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP 523 (791)
T ss_dssp -----------------------------------------------TTTEEEEEETTSSSEEEEEECTTCCEEEEEEET
T ss_pred -----------------------------------------------CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEec
Confidence 1246778888774 3333322 2345889999
Q ss_pred CCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeec
Q 007620 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (595)
Q Consensus 185 Dg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d 264 (595)
.+.+|+++.... ...|++++++|...+.+....+. .+..+...+.+. .|||...
T Consensus 524 ~~g~LYwtD~g~-----------~~~I~~~~~dG~~~~~lv~~~l~------------~P~GLavD~~~~-~LYwaD~-- 577 (791)
T 3m0c_C 524 VHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENIQ------------WPNGITLDLLSG-RLYWVDS-- 577 (791)
T ss_dssp TTTEEEEEECSS-----------SCEEEEEETTSCCEEEEECSSCS------------CEEEEEEETTTT-EEEEEET--
T ss_pred CCCCEEEecCCC-----------CCeEEEEecCCCceEEEEeCCCC------------CceEEEEecCCC-eEEEEeC--
Confidence 988898885322 13789999998777666432110 122455555554 4877631
Q ss_pred CCCcccccCCcceEEeccCCCCCCCCceeccccCccc-cceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF-RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 265 ~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~-~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
..+.|.++++ +|...+.+....... ..+..+.++..|+... .....|++++..++
T Consensus 578 ---------~~~~I~~~d~---dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD---~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 578 ---------KLHSISSIDV---NGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD---IINEAIFSANRLTG 633 (791)
T ss_dssp ---------TTTEEEEEET---TSCSCEEEEECTTTTSSEEEEEEETTEEEEEE---TTTTEEEEEETTTC
T ss_pred ---------CCCcEEEEec---CCCceEEEecCCCccCCCCEEEEeCCEEEEEE---CCCCEEEEEeCCCC
Confidence 1245666675 554454444332221 1222332333443332 23347888886554
No 232
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.14 E-value=0.12 Score=57.29 Aligned_cols=185 Identities=12% Similarity=-0.013 Sum_probs=102.7
Q ss_pred eEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCccccccccccccc
Q 007620 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (595)
Q Consensus 62 ~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 141 (595)
..|..+++.+++...+..... ....+.|.+.+..|+++-.
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~~~-----~~~gl~~d~~~~~lY~sD~----------------------------------- 443 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSDL----------------------------------- 443 (791)
T ss_dssp SSEEEECTTSCCCEEEECSCS-----SEEEEEEETTTTEEEEEET-----------------------------------
T ss_pred cceeEeeccCCcceeeecCCC-----ceEEEeecccCCeeEEeec-----------------------------------
Confidence 567888887776555543222 2446788887777777621
Q ss_pred ccCcCCccceEEeecceEEEEcCCC-----CeeecCC-C-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEE
Q 007620 142 LKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (595)
Q Consensus 142 ~~~~~~~~~~~~~~~~~l~~~d~~g-----~~~~lt~-~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (595)
....|++++++| ..+.+.. . .....+++.+.++.|+++... ...|+++
T Consensus 444 -------------~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~------------~~~I~v~ 498 (791)
T 3m0c_C 444 -------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSVA 498 (791)
T ss_dssp -------------TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred -------------cceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecC------------CCeEEEE
Confidence 012355555543 1222222 1 123467888888888888542 2478999
Q ss_pred cCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceec
Q 007620 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (595)
Q Consensus 215 d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l 294 (595)
+++|...+.|....+ ..++.++..|.+. .|||..+ + ....|+++++ +|...+.+
T Consensus 499 ~ldG~~~~~l~~~~l------------~~P~gIaVDp~~g-~LYwtD~---g-------~~~~I~~~~~---dG~~~~~l 552 (791)
T 3m0c_C 499 DTKGVKRKTLFRENG------------SKPRAIVVDPVHG-FMYWTDW---G-------TPAKIKKGGL---NGVDIYSL 552 (791)
T ss_dssp ETTSSSEEEEEECTT------------CCEEEEEEETTTT-EEEEEEC---S-------SSCEEEEEET---TSCCEEEE
T ss_pred eCCCCeEEEEEeCCC------------CCcceEEEecCCC-CEEEecC---C-------CCCeEEEEec---CCCceEEE
Confidence 999877766643211 1123456666544 4777632 1 1135666665 55444444
Q ss_pred cccC-ccccceeecCCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEe
Q 007620 295 HKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (595)
Q Consensus 295 ~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~ 342 (595)
.... .....+++.+.+..|+... .....|+++++++. ..+.+.
T Consensus 553 v~~~l~~P~GLavD~~~~~LYwaD---~~~~~I~~~d~dG~--~~~~v~ 596 (791)
T 3m0c_C 553 VTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGG--NRKTIL 596 (791)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSC--SCEEEE
T ss_pred EeCCCCCceEEEEecCCCeEEEEe---CCCCcEEEEecCCC--ceEEEe
Confidence 4322 2344566776665555443 23458999999883 445554
No 233
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.08 E-value=0.24 Score=47.96 Aligned_cols=68 Identities=15% Similarity=0.223 Sum_probs=43.1
Q ss_pred CceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCc
Q 007620 20 PEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNST 99 (595)
Q Consensus 20 ~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~ 99 (595)
..+.+.+++.+.....+.|+|||+ |+++ .. ....|++++.+++....+ .... ....+.+++||+
T Consensus 21 ~~~~~~~~p~~~~pegia~~~~g~-lyv~-d~--------~~~~I~~~d~~g~~~~~~-~~~~-----~p~gia~~~dG~ 84 (306)
T 2p4o_A 21 PAKIITSFPVNTFLENLASAPDGT-IFVT-NH--------EVGEIVSITPDGNQQIHA-TVEG-----KVSGLAFTSNGD 84 (306)
T ss_dssp CEEEEEEECTTCCEEEEEECTTSC-EEEE-ET--------TTTEEEEECTTCCEEEEE-ECSS-----EEEEEEECTTSC
T ss_pred CceEeEeCCCCCCcceEEECCCCC-EEEE-eC--------CCCeEEEECCCCceEEEE-eCCC-----CceeEEEcCCCc
Confidence 345556666555677889999997 5454 32 346799999876543332 2222 345788999998
Q ss_pred EEEEE
Q 007620 100 LLIFT 104 (595)
Q Consensus 100 ~l~~~ 104 (595)
|++.
T Consensus 85 -l~va 88 (306)
T 2p4o_A 85 -LVAT 88 (306)
T ss_dssp -EEEE
T ss_pred -EEEE
Confidence 4443
No 234
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=97.04 E-value=0.00073 Score=68.84 Aligned_cols=81 Identities=12% Similarity=0.143 Sum_probs=53.1
Q ss_pred CceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCC----C---cccCCCCchhHHHh
Q 007620 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP----N---EFSGMTPTSSLIFL 552 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp----~---~~~~~~~~~~q~la 552 (595)
...|.+++++.||.+|+|+|++|.+.. + +.|+||++|+...+ ...+.+.. + .|........+.||
T Consensus 85 ~~~e~v~~~~~~g~~l~~~l~~P~~~~--~--~~P~Vl~~HG~g~~----~~~~~~~~~~~~~~~~~y~~~~~~~a~~la 156 (391)
T 3g8y_A 85 YILEKWEFYPFPKSVSTFLVLKPEHLK--G--AVPGVLCIPGSGRT----KEGLVGEPGICDKLTEDYNNPKVSMALNMV 156 (391)
T ss_dssp EEEEEEEECCSTTCCEEEEEEEETTCC--S--CEEEEEEECCTTCC----HHHHTTCCCSSGGGCCCTTSTTTCHHHHHH
T ss_pred EEEEEEEEEcCCCCEEEEEEEeCCCCC--C--CCCEEEEeCCCCCC----chhhccccccccccchhhcchHHHHHHHHH
Confidence 367889999999999999999998752 2 45999998864111 00011110 0 01100113468999
Q ss_pred ccCeEEEeCCCCceeec
Q 007620 553 ARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 553 ~~GY~Vl~~~~~~~~~~ 569 (595)
++||+|+. ++.+..|.
T Consensus 157 ~~G~~Vl~-~D~rg~G~ 172 (391)
T 3g8y_A 157 KEGYVAVA-VDNAAAGE 172 (391)
T ss_dssp TTTCEEEE-CCCTTSGG
T ss_pred HCCCEEEE-ecCCCccc
Confidence 99999999 88777665
No 235
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.02 E-value=0.011 Score=65.02 Aligned_cols=101 Identities=15% Similarity=0.166 Sum_probs=58.4
Q ss_pred ceEEEEcCCCC-eeecCCCC--eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccC
Q 007620 157 AQLVLGSLDGT-AKDFGTPA--VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (595)
Q Consensus 157 ~~l~~~d~~g~-~~~lt~~~--~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~ 233 (595)
..|++++++|. .+.|.... ....+++.|++.+|+++.... ...|++++++|...+.+....+
T Consensus 475 ~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~-----------~~~I~~~~~dG~~~~~l~~~~l---- 539 (699)
T 1n7d_A 475 GTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENI---- 539 (699)
T ss_dssp SCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS-----------SCCEEBCCSSSCCCCEESCSSC----
T ss_pred CeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC-----------CCeEEEEeCCCCCeeEEEeCCC----
Confidence 45778888763 34443322 234788999988888774321 1368888888765555432211
Q ss_pred CccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecc
Q 007620 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH 295 (595)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~ 295 (595)
..+..+.|.|++. .|||... ....|++++. +|...+.+.
T Consensus 540 --------~~PnGlavd~~~~-~LY~aD~-----------~~~~I~~~d~---dG~~~~~~~ 578 (699)
T 1n7d_A 540 --------QWPNGITLDLLSG-RLYWVDS-----------KLHSISSIDV---NGGNRKTIL 578 (699)
T ss_dssp --------SSCCCEEECTTTC-CEEEEET-----------TTTEEEEECS---SSSCCEEEC
T ss_pred --------CCccEEEEeccCC-EEEEEec-----------CCCeEEEEcc---CCCceEEEE
Confidence 1134688888875 3877631 1245677675 544444443
No 236
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.98 E-value=0.19 Score=49.04 Aligned_cols=198 Identities=14% Similarity=0.076 Sum_probs=109.7
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCce--EecccCCCccccccccceEEecCCcEEEEEecCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~--~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~ 109 (595)
......|.+.+++|+|+-. ....|++++++++.. ..+...-. ....+++.+.+..|+++-.
T Consensus 36 ~~~~ld~d~~~~~lyw~D~---------~~~~I~r~~~~g~~~~~~~~~~~l~-----~p~glavd~~~g~ly~~d~--- 98 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDV---------SEEAIKRTEFNKTESVQNVVVSGLL-----SPDGLACDWLGEKLYWTDS--- 98 (318)
T ss_dssp EEEEEEEEGGGTEEEEEET---------TTTEEEEEETTSSSCCCEEEEECCS-----CCCEEEEETTTTEEEEEET---
T ss_pred ccEEEEEEeCCCEEEEEEC---------CCCcEEEEEccCCCceEEEEcCCCC-----CccEEEEEcCCCeEEEEEC---
Confidence 3557789998888877632 346799999887642 22211111 2345677777777777511
Q ss_pred CCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCC-eeecCCC--CeeeeeEECCCC
Q 007620 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSPDQ 186 (595)
Q Consensus 110 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~lt~~--~~~~~~~~SpDg 186 (595)
....|.+++++|. .+.+... .....+++.|.+
T Consensus 99 ---------------------------------------------~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~ 133 (318)
T 3sov_A 99 ---------------------------------------------ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSS 133 (318)
T ss_dssp ---------------------------------------------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGG
T ss_pred ---------------------------------------------CCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCC
Confidence 1245677777763 3333222 234578899988
Q ss_pred CeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCC
Q 007620 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (595)
Q Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~ 266 (595)
.+|+++.... ...|++++++|...+.+..... ..+..+.+++++. .|||...
T Consensus 134 g~ly~td~~~-----------~~~I~r~~~dG~~~~~~~~~~l------------~~Pnglavd~~~~-~lY~aD~---- 185 (318)
T 3sov_A 134 GFMYWTDWGE-----------VPKIERAGMDGSSRFIIINSEI------------YWPNGLTLDYEEQ-KLYWADA---- 185 (318)
T ss_dssp TEEEEEECSS-----------SCEEEEEETTSCSCEEEECSSC------------SCEEEEEEETTTT-EEEEEET----
T ss_pred CEEEEEecCC-----------CCEEEEEEcCCCCeEEEEECCC------------CCccEEEEeccCC-EEEEEEC----
Confidence 8888875321 2378999998766555532211 0123578888766 4887631
Q ss_pred CcccccCCcceEEeccCCCCCCCCceeccccC-ccccceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 267 DANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 267 ~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
..+.|+.++. +|...+.+.... .....+.. ++..++...+ ....|++++..++
T Consensus 186 -------~~~~I~~~d~---dG~~~~~~~~~~~~~P~glav--~~~~lywtd~---~~~~V~~~~~~~G 239 (318)
T 3sov_A 186 -------KLNFIHKSNL---DGTNRQAVVKGSLPHPFALTL--FEDILYWTDW---STHSILACNKYTG 239 (318)
T ss_dssp -------TTTEEEEEET---TSCSCEEEECSCCSCEEEEEE--ETTEEEEEET---TTTEEEEEETTTC
T ss_pred -------CCCEEEEEcC---CCCceEEEecCCCCCceEEEE--eCCEEEEEec---CCCeEEEEECCCC
Confidence 2346676675 554444443211 11112222 2222332222 3347888887553
No 237
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.93 E-value=0.35 Score=47.60 Aligned_cols=143 Identities=10% Similarity=0.021 Sum_probs=74.0
Q ss_pred CCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc--cccccceEEec
Q 007620 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL--NAVFGSFVWVN 96 (595)
Q Consensus 19 g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~--~~~~~~~~Wsp 96 (595)
|+.+.+.++. .......++|||+. ++...+.. .+...||.++ +|+...+........ -..+..+.+++
T Consensus 7 g~~~~v~~~~--~~p~~va~~~~g~~-~v~~~~~~-----~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~ 76 (343)
T 2qe8_A 7 DRLEVVAELS--LAPGNITLTPDGRL-FLSLHQFY-----QPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDG 76 (343)
T ss_dssp -CCEEEEEES--SCEEEEEECTTSCE-EEEECGGG-----CCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECS
T ss_pred ceeEEEEEcC--CCcceEEECCCCCE-EEEeCCCC-----CCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcC
Confidence 4556666544 35778899999974 33322211 1125789888 565554321110000 01234678888
Q ss_pred CCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCC-eeecCC-
Q 007620 97 NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGT- 173 (595)
Q Consensus 97 dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~-~~~lt~- 173 (595)
+|+ |+++-. +. .. . ...+|+++|+ +|+ .+.+.-
T Consensus 77 ~g~-L~v~D~-----------------------g~----~~-----~-----------~~~~i~~~d~~tg~~~~~~~~~ 112 (343)
T 2qe8_A 77 NGI-VWMLDN-----------------------GN----QS-----K-----------SVPKLVAWDTLNNQLSRVIYLP 112 (343)
T ss_dssp SSE-EEEEEC-----------------------HH----HH-----T-----------SCCEEEEEETTTTEEEEEEECC
T ss_pred CCc-EEEEcC-----------------------CC----Cc-----C-----------CCCeEEEEECCCCeEEEEEECC
Confidence 887 444310 10 00 0 0245777777 455 333321
Q ss_pred -----C-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEe
Q 007620 174 -----P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (595)
Q Consensus 174 -----~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l 224 (595)
. .....++++|++..++++..... ....|+++|+.+++...+
T Consensus 113 ~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~---------~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 113 PPITLSNSFVNDLAVDLIHNFVYISDPAPD---------DKAALIRVDLQTGLAARV 160 (343)
T ss_dssp TTTSCTTCCCCEEEEETTTTEEEEEECCSG---------GGCEEEEEETTTCCEEEE
T ss_pred hhhcccccccceEEEecCCCEEEEEcCccC---------CCCeEEEEECCCCCEEEE
Confidence 1 13357889988777777643100 124788999886655443
No 238
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.93 E-value=0.13 Score=50.63 Aligned_cols=65 Identities=12% Similarity=0.001 Sum_probs=34.2
Q ss_pred cceEEEEcC-CCC-eeecCCCC----eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE
Q 007620 156 TAQLVLGSL-DGT-AKDFGTPA----VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (595)
Q Consensus 156 ~~~l~~~d~-~g~-~~~lt~~~----~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~ 221 (595)
...|.+.|+ +|+ .+.|.... .....+|||||+.++....... ...+.-......+.+||..+++.
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~-~w~laSGs~D~tIklWd~~tgk~ 272 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA-KESESLRSPVFQLIVINPKTTLS 272 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-------------CCEEEEEEETTTTEE
T ss_pred CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC-cceeeccCCCcEEEEEECCCCEE
Confidence 356777888 675 45554221 2235689999998876543211 00011112245677888887654
No 239
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.90 E-value=0.0042 Score=64.09 Aligned_cols=123 Identities=11% Similarity=0.116 Sum_probs=69.7
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCC-----ce-Ee---cccCCCccccccccceEEecC-CcEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-----EA-KP---LFESPDICLNAVFGSFVWVNN-STLL 101 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g-----~~-~~---lt~~~~~~~~~~~~~~~Wspd-g~~l 101 (595)
.+....|||||++||.....+ .....|.++|+.++ +. +. +..... ....+..+.|+|+ +..|
T Consensus 94 ~v~~l~~spdg~~lav~~~sg------s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSS------EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKD--AGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEET------TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCS--GGGSEEEEEECSSCTTEE
T ss_pred cccEEEEcCCCCEEEEEEecc------CCCceEEEEEccccccCCcCCcceeeeeeccCC--CCCceEEEEECCCCCCEE
Confidence 478899999999998743111 23456777787644 11 11 111110 0124678999998 5666
Q ss_pred EEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcC-CCCe-e-ecCCCCeee
Q 007620 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-K-DFGTPAVYT 178 (595)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-~g~~-~-~lt~~~~~~ 178 (595)
+....+ ..|.++|+ ++.. . .........
T Consensus 166 as~s~D-------------------------------------------------g~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 166 AVCLAD-------------------------------------------------GSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEETT-------------------------------------------------SCEEEEEESSSEEEEEEECGGGCEE
T ss_pred EEEECC-------------------------------------------------CeEEEEEcCCCcceeeccCCCCcee
Confidence 554211 12334444 2211 1 111123456
Q ss_pred eeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEe
Q 007620 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (595)
Q Consensus 179 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l 224 (595)
.++|||||++|+....+ ..+.+||+.+...+.+
T Consensus 197 ~v~wspdg~~lasgs~d-------------g~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQN-------------GTVVQYLPTLQEKKVI 229 (434)
T ss_dssp EEEECTTSSCEEEEETT-------------SCEEEECTTCCEEEEE
T ss_pred EEEEcCCCCEEEEEcCC-------------CcEEEEccCCcccccc
Confidence 89999999999887642 3688999885444443
No 240
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.89 E-value=0.36 Score=46.97 Aligned_cols=168 Identities=8% Similarity=0.011 Sum_probs=89.5
Q ss_pred cceEEEEcCCC-CeeecC-CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC----ceEEEeccCCC
Q 007620 156 TAQLVLGSLDG-TAKDFG-TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG----KLVRELCDLPP 229 (595)
Q Consensus 156 ~~~l~~~d~~g-~~~~lt-~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g----~~~~~l~~~~~ 229 (595)
...|.++++++ +...+. .......+.|++++..|+++... ...|+++++++ .....+.....
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~------------~~~I~~~~~~g~~~~~~~~~~~~~~~ 76 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRDI 76 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEECSSC
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECC------------CCcEEEEECCCCCCCcccEEEEeCCC
Confidence 45788899855 444432 22344688999998899888643 23788998876 23233221100
Q ss_pred CccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecccc-CccccceeecC
Q 007620 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCD 308 (595)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~-~~~~~~~~wsp 308 (595)
..+..+...+.+. .||+... ..+.+.+++. +|...+.+... ......+...|
T Consensus 77 ------------~~p~glavd~~~~-~ly~~d~-----------~~~~I~~~~~---~g~~~~~~~~~~~~~P~~iavdp 129 (316)
T 1ijq_A 77 ------------QAPDGLAVDWIHS-NIYWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVVDP 129 (316)
T ss_dssp ------------SCCCEEEEETTTT-EEEEEET-----------TTTEEEEEET---TSSSEEEEEECTTCCEEEEEEET
T ss_pred ------------CCcCEEEEeecCC-eEEEEEC-----------CCCEEEEEeC---CCCceEEEEECCCCCcceEEeCC
Confidence 0122344444333 4776521 1235666665 44333444332 22345567777
Q ss_pred CCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007620 309 DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (595)
Q Consensus 309 Dg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 372 (595)
++..++...+. ....|+++++++. ..+.+...... .|. .+.++++++.||+...
T Consensus 130 ~~g~ly~~d~~--~~~~I~~~~~dG~--~~~~~~~~~~~----~P~--gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 130 VHGFMYWTDWG--TPAKIKKGGLNGV--DIYSLVTENIQ----WPN--GITLDLLSGRLYWVDS 183 (316)
T ss_dssp TTTEEEEEECS--SSCEEEEEETTSC--CEEEEECSSCS----CEE--EEEEETTTTEEEEEET
T ss_pred CCCEEEEEccC--CCCeEEEEcCCCC--CeEEEEECCCC----Cce--EEEEeccCCEEEEEEC
Confidence 65544443322 1248999999873 33444322211 111 1778888888888753
No 241
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.88 E-value=0.027 Score=58.00 Aligned_cols=116 Identities=9% Similarity=0.091 Sum_probs=62.7
Q ss_pred eeeeeEECCC-CCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCC
Q 007620 176 VYTAVEPSPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (595)
Q Consensus 176 ~~~~~~~SpD-g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~ 254 (595)
.+..++|+|+ ++.|+....+ ..+.+||+.++...... .. .......+.|+|+|+
T Consensus 151 ~V~~v~~~p~~~~~las~s~D-------------g~v~iwD~~~~~~~~~~-~~-----------~~~~v~~v~wspdg~ 205 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLAD-------------GSIAVLQVTETVKVCAT-LP-----------STVAVTSVCWSPKGK 205 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETT-------------SCEEEEEESSSEEEEEE-EC-----------GGGCEEEEEECTTSS
T ss_pred ceEEEEECCCCCCEEEEEECC-------------CeEEEEEcCCCcceeec-cC-----------CCCceeEEEEcCCCC
Confidence 4568999998 5666555432 36889998866432111 00 011234689999987
Q ss_pred eeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-ecccc-------CccccceeecCCCcEEEEEEeec---ccc
Q 007620 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKL-------DLRFRSVSWCDDSLALVNETWYK---TSQ 323 (595)
Q Consensus 255 ~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~-------~~~~~~~~wspDg~~l~~~~~~~---~~~ 323 (595)
. |+.. .....+.+++. .+ +.. .+... ......+.|++++..++.-...+ ...
T Consensus 206 ~-lasg------------s~dg~v~iwd~---~~-~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 206 Q-LAVG------------KQNGTVVQYLP---TL-QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp C-EEEE------------ETTSCEEEECT---TC-CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred E-EEEE------------cCCCcEEEEcc---CC-cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 4 4332 11235667775 32 322 22111 12456789999887654322221 122
Q ss_pred eEEEEEeCCC
Q 007620 324 TRTWLVCPGS 333 (595)
Q Consensus 324 ~~L~~~d~~~ 333 (595)
..+.++++..
T Consensus 269 ~~v~i~~l~~ 278 (434)
T 2oit_A 269 PDVVMALLPK 278 (434)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEEecc
Confidence 3466667665
No 242
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.82 E-value=0.19 Score=51.48 Aligned_cols=55 Identities=7% Similarity=-0.107 Sum_probs=32.1
Q ss_pred ceEEeccCCCCCCCCc-eecc-----ccCccccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 276 DIIYTQPAEPAEGEKP-EILH-----KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 276 ~~~~~~d~~~~~g~~~-~~l~-----~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
..+.+++. ..++. ..+. .....+..+.|+|++..++...........|+++|.+.
T Consensus 382 g~v~iwd~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 382 GTVKLWDL---KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp SEEEEEET---TTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CeEEEEEC---CCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 46777776 32333 2331 22345677899999987776542222234677788764
No 243
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.75 E-value=0.47 Score=46.25 Aligned_cols=168 Identities=10% Similarity=-0.004 Sum_probs=89.4
Q ss_pred ecceEEEEcCCCC---eeecCC-CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE--EEeccCC
Q 007620 155 TTAQLVLGSLDGT---AKDFGT-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLP 228 (595)
Q Consensus 155 ~~~~l~~~d~~g~---~~~lt~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~--~~l~~~~ 228 (595)
....|.++++++. ...+.. -.....+.|.+.+..|+++... ...|++++++++.. ..+...
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~------------~~~I~r~~~~g~~~~~~~~~~~- 77 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS------------EEAIKRTEFNKTESVQNVVVSG- 77 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETT------------TTEEEEEETTSSSCCCEEEEEC-
T ss_pred ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECC------------CCcEEEEEccCCCceEEEEcCC-
Confidence 3567888999653 222211 1233478899988888888543 23788888886632 222111
Q ss_pred CCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecccc-Cccccceeec
Q 007620 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWC 307 (595)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~-~~~~~~~~ws 307 (595)
. ..+..+...+.+. .||+... ....+.+++. +|...+.+... ......+...
T Consensus 78 l------------~~p~glavd~~~g-~ly~~d~-----------~~~~I~~~~~---dG~~~~~l~~~~~~~P~giavd 130 (318)
T 3sov_A 78 L------------LSPDGLACDWLGE-KLYWTDS-----------ETNRIEVSNL---DGSLRKVLFWQELDQPRAIALD 130 (318)
T ss_dssp C------------SCCCEEEEETTTT-EEEEEET-----------TTTEEEEEET---TSCSCEEEECSSCSSEEEEEEE
T ss_pred C------------CCccEEEEEcCCC-eEEEEEC-----------CCCEEEEEEC---CCCcEEEEEeCCCCCccEEEEe
Confidence 0 0122344443333 3766521 1235666665 54333444322 2234456667
Q ss_pred CCCcEEEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEee
Q 007620 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (595)
Q Consensus 308 pDg~~l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~ 372 (595)
|.+..++...+. ...+|+++++++. ..+.+....+. .|. .++++++++.||+...
T Consensus 131 p~~g~ly~td~~--~~~~I~r~~~dG~--~~~~~~~~~l~----~Pn--glavd~~~~~lY~aD~ 185 (318)
T 3sov_A 131 PSSGFMYWTDWG--EVPKIERAGMDGS--SRFIIINSEIY----WPN--GLTLDYEEQKLYWADA 185 (318)
T ss_dssp GGGTEEEEEECS--SSCEEEEEETTSC--SCEEEECSSCS----CEE--EEEEETTTTEEEEEET
T ss_pred CCCCEEEEEecC--CCCEEEEEEcCCC--CeEEEEECCCC----Ccc--EEEEeccCCEEEEEEC
Confidence 764444443332 2358999999873 44545432221 111 1788888888888753
No 244
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=96.75 E-value=0.0038 Score=60.77 Aligned_cols=38 Identities=24% Similarity=0.381 Sum_probs=32.8
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEecc
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYP 521 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~ 521 (595)
+.+.++|++.+| ++..+|++|++|+++++| |+||+.|+
T Consensus 40 ~~~~~~~~s~~~-~~~~~vy~P~~~~~~~~~--Pvlv~lHG 77 (297)
T 1gkl_A 40 RIVKETYTGING-TKSLNVYLPYGYDPNKKY--NIFYLMHG 77 (297)
T ss_dssp EEEEEEEEETTE-EEEEEEEECTTCCTTSCC--EEEEEECC
T ss_pred eEEEEEEEcCCC-EEEEEEEeCCCCCCCCCC--CEEEEECC
Confidence 678899999887 999999999999876656 99998775
No 245
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=96.74 E-value=0.0014 Score=65.74 Aligned_cols=71 Identities=24% Similarity=0.390 Sum_probs=50.1
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
..+.+++++.||.+++++++.|.+ .+.+ +.|+||++|+. ++.. ..+.....+.|+++||.|+.
T Consensus 67 ~~~~~~~~~~~g~~~~~~~~~p~~-~~~~--~~p~vv~~hG~------------~~~~--~~~~~~~~~~l~~~G~~v~~ 129 (367)
T 2hdw_A 67 EHRKVTFANRYGITLAADLYLPKN-RGGD--RLPAIVIGGPF------------GAVK--EQSSGLYAQTMAERGFVTLA 129 (367)
T ss_dssp EEEEEEEECTTSCEEEEEEEEESS-CCSS--CEEEEEEECCT------------TCCT--TSHHHHHHHHHHHTTCEEEE
T ss_pred eeEEEEEecCCCCEEEEEEEeCCC-CCCC--CCCEEEEECCC------------CCcc--hhhHHHHHHHHHHCCCEEEE
Confidence 778999999999999999999987 4333 34999998742 1110 00000135789999999999
Q ss_pred CCCCceeec
Q 007620 561 GPSIPIIGE 569 (595)
Q Consensus 561 ~~~~~~~~~ 569 (595)
++.+..|.
T Consensus 130 -~d~~g~g~ 137 (367)
T 2hdw_A 130 -FDPSYTGE 137 (367)
T ss_dssp -ECCTTSTT
T ss_pred -ECCCCcCC
Confidence 77776553
No 246
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=96.73 E-value=0.0014 Score=66.63 Aligned_cols=106 Identities=18% Similarity=0.200 Sum_probs=65.9
Q ss_pred EEEEEecCCCcceEEEEeCCCC--ceeeEecCCCCCCCcCCCceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEE
Q 007620 441 ILTSKESKTEITQYHILSWPLK--KSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFW 518 (595)
Q Consensus 441 l~~~~~s~~~p~~l~~~d~~~~--~~~~Lt~~~~~~~~~~~~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~ 518 (595)
+++..++..+|.++|+.+.... ..++++..+.. .+......|.++++. ||.+|+|++++|.+. + +.|+||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~-dg~~i~~~l~~p~~~---~--~~P~vl~ 157 (386)
T 2jbw_A 85 LLMSAALCAQYAQFLWFDERRQKGQARKVELYQKA-APLLSPPAERHELVV-DGIPMPVYVRIPEGP---G--PHPAVIM 157 (386)
T ss_dssp HHHHHHHHHHHHHTTCCSTHHHHHHHHHHHHHHHH-GGGSSSCEEEEEEEE-TTEEEEEEEECCSSS---C--CEEEEEE
T ss_pred HHHHHHHhhceeeeeccCCCCCHHHHHHHHHHHHH-HhhcCCCeEEEEEEe-CCEEEEEEEEcCCCC---C--CCCEEEE
Confidence 4455556677888777653210 12334444321 122223788899987 999999999999874 2 3399998
Q ss_pred eccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceeec
Q 007620 519 AYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 519 ~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
+|+. ..... ..+...+.|+++||+|+. ++.+..|.
T Consensus 158 ~hG~--------------~~~~~-~~~~~~~~l~~~G~~v~~-~d~rG~G~ 192 (386)
T 2jbw_A 158 LGGL--------------ESTKE-ESFQMENLVLDRGMATAT-FDGPGQGE 192 (386)
T ss_dssp ECCS--------------SCCTT-TTHHHHHHHHHTTCEEEE-ECCTTSGG
T ss_pred eCCC--------------CccHH-HHHHHHHHHHhCCCEEEE-ECCCCCCC
Confidence 6532 11111 112236899999999999 77776654
No 247
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.72 E-value=0.76 Score=49.48 Aligned_cols=220 Identities=13% Similarity=0.042 Sum_probs=120.0
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|...+|. +.....+.-+..........|+|++.+|+++-. ....|++++++++....+......
T Consensus 16 ~I~~i~l~----~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~---------~~~~I~r~~~~g~~~~~v~~~g~~-- 80 (628)
T 4a0p_A 16 DIRRISLE----TNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI---------SLKTISRAFMNGSALEHVVEFGLD-- 80 (628)
T ss_dssp EEEEEESS----CTTCEEECCCCSCSCEEEEEEETTTTEEEEEET---------TTTEEEEEETTSCSCEEEECSSCS--
T ss_pred cEEEEECC----CCCcceEEEcCCCCceEEEEEECCCCEEEEEEC---------CCCeEEEEECCCCCcEEEEeCCCC--
Confidence 45556665 333332221222224667889999888877642 346899999987765554332110
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCC
Q 007620 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 165 (595)
....++..+.++.|+++-. ...+|.+++++
T Consensus 81 --~P~GlAvD~~~~~LY~tD~------------------------------------------------~~~~I~v~~~d 110 (628)
T 4a0p_A 81 --YPEGMAVDWLGKNLYWADT------------------------------------------------GTNRIEVSKLD 110 (628)
T ss_dssp --CCCEEEEETTTTEEEEEET------------------------------------------------TTTEEEEEETT
T ss_pred --CcceEEEEeCCCEEEEEEC------------------------------------------------CCCEEEEEecC
Confidence 2345666667777777511 12467778887
Q ss_pred CC-eeecCCCC--eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCcccccccc
Q 007620 166 GT-AKDFGTPA--VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (595)
Q Consensus 166 g~-~~~lt~~~--~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~ 242 (595)
|. .+.|.... ....+++.|....|+++.... ...|++++++|...+.+... . .
T Consensus 111 G~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~-----------~~~I~r~~~dG~~~~~l~~~-~------------~ 166 (628)
T 4a0p_A 111 GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG-----------KPKIDRAAMDGSERTTLVPN-V------------G 166 (628)
T ss_dssp STTCEEEECSSCCCEEEEEEETTTTEEEEEECSS-----------SCEEEEEETTSCSCEEEECS-C------------S
T ss_pred CCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC-----------CCEEEEEeCCCCceEEEECC-C------------C
Confidence 74 33333222 345788999877888875321 23789999998776665431 0 0
Q ss_pred CCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeeccc
Q 007620 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS 322 (595)
Q Consensus 243 ~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~ 322 (595)
.+..+...++++ .|||... ..+.+..++. +|+..+.+...-.....++.. +..++...+ .
T Consensus 167 ~P~GlalD~~~~-~LY~aD~-----------~~~~I~~~d~---dG~~~~v~~~~l~~P~glav~--~~~ly~tD~---~ 226 (628)
T 4a0p_A 167 RANGLTIDYAKR-RLYWTDL-----------DTNLIESSNM---LGLNREVIADDLPHPFGLTQY--QDYIYWTDW---S 226 (628)
T ss_dssp SEEEEEEETTTT-EEEEEET-----------TTTEEEEEET---TSCSCEEEEECCSCEEEEEEE--TTEEEEEET---T
T ss_pred CcceEEEccccC-EEEEEEC-----------CCCEEEEEcC---CCCceEEeeccCCCceEEEEE--CCEEEEecC---C
Confidence 122466677665 4887632 2345666675 553443232211111122222 223333322 2
Q ss_pred ceEEEEEeCCCC
Q 007620 323 QTRTWLVCPGSK 334 (595)
Q Consensus 323 ~~~L~~~d~~~~ 334 (595)
...|+++|..++
T Consensus 227 ~~~I~~~dk~tg 238 (628)
T 4a0p_A 227 RRSIERANKTSG 238 (628)
T ss_dssp TTEEEEEETTTC
T ss_pred CCEEEEEECCCC
Confidence 347888887654
No 248
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=96.62 E-value=0.0029 Score=62.93 Aligned_cols=68 Identities=16% Similarity=0.131 Sum_probs=49.3
Q ss_pred CceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
...+.++|++.||.+|+++++.|.+ . + +.|+||++|+. +... ..+.....++++||+|+
T Consensus 80 ~~~~~~~~~~~~g~~l~~~~~~P~~-~--~--~~p~vv~~HG~--------------g~~~--~~~~~~~~~~~~G~~v~ 138 (346)
T 3fcy_A 80 AECYDLYFTGVRGARIHAKYIKPKT-E--G--KHPALIRFHGY--------------SSNS--GDWNDKLNYVAAGFTVV 138 (346)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEESC-S--S--CEEEEEEECCT--------------TCCS--CCSGGGHHHHTTTCEEE
T ss_pred eEEEEEEEEcCCCCEEEEEEEecCC-C--C--CcCEEEEECCC--------------CCCC--CChhhhhHHHhCCcEEE
Confidence 3788899999999999999999986 2 2 34999998743 1111 11223357889999999
Q ss_pred eCCCCceeec
Q 007620 560 AGPSIPIIGE 569 (595)
Q Consensus 560 ~~~~~~~~~~ 569 (595)
. ++.+..|.
T Consensus 139 ~-~D~rG~g~ 147 (346)
T 3fcy_A 139 A-MDVRGQGG 147 (346)
T ss_dssp E-ECCTTSSS
T ss_pred E-EcCCCCCC
Confidence 9 77776553
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.57 E-value=0.49 Score=44.39 Aligned_cols=65 Identities=9% Similarity=0.215 Sum_probs=42.4
Q ss_pred ceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcE
Q 007620 21 EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTL 100 (595)
Q Consensus 21 ~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~ 100 (595)
+++|.++.. ..+...|+||++.|+.+.. ....|+.+|+.+...+++. .... .....+++.++++.
T Consensus 19 ~~~l~g~~~--~lSGla~~~~~~~L~aV~d---------~~~~I~~ld~~g~v~~~i~-l~g~---~D~EGIa~~~~g~~ 83 (255)
T 3qqz_A 19 GKEIAGITN--NISSLTWSAQSNTLFSTIN---------KPAAIVEMTTNGDLIRTIP-LDFV---KDLETIEYIGDNQF 83 (255)
T ss_dssp EEECTTCCS--CEEEEEEETTTTEEEEEEE---------TTEEEEEEETTCCEEEEEE-CSSC---SSEEEEEECSTTEE
T ss_pred ceECCCccc--CcceeEEeCCCCEEEEEEC---------CCCeEEEEeCCCCEEEEEe-cCCC---CChHHeEEeCCCEE
Confidence 356654443 4889999999998877764 3578999999833344442 1110 13457788888863
No 250
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=96.53 E-value=0.002 Score=61.89 Aligned_cols=71 Identities=17% Similarity=0.271 Sum_probs=47.5
Q ss_pred ceEEEEEEC-CCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 481 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~-~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
..+.+++.+ .+|.+++.++++|+++++++++ |+||++|+.. +....|... ....++++.+||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~--P~vv~lHG~~-----------~~~~~~~~~-~~~~~~~~~~g~~vv 79 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGASESNKV--PVLYWLSGLT-----------CTDENFMQK-AGAFKKAAELGIAIV 79 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCBTTBCE--EEEEEECCTT-----------CCSHHHHHH-SCCHHHHHHHTCEEE
T ss_pred eEEEEEEechhcCCceEEEEEcCCCCCCCCCc--CEEEEeCCCC-----------CChhhhhcc-hhHHHHHhhCCeEEE
Confidence 456667765 5899999999999998866655 9999987531 001111111 112468888899999
Q ss_pred eCCCCce
Q 007620 560 AGPSIPI 566 (595)
Q Consensus 560 ~~~~~~~ 566 (595)
. |+.+.
T Consensus 80 ~-~d~~~ 85 (280)
T 3ls2_A 80 A-PDTSP 85 (280)
T ss_dssp E-CCSSC
T ss_pred E-eCCcc
Confidence 9 77553
No 251
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.50 E-value=0.59 Score=44.26 Aligned_cols=118 Identities=13% Similarity=0.198 Sum_probs=61.6
Q ss_pred eEEEEcCCCCe-eecCC---CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccC
Q 007620 158 QLVLGSLDGTA-KDFGT---PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (595)
Q Consensus 158 ~l~~~d~~g~~-~~lt~---~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~ 233 (595)
.|++++.+|+. ..+.. ......++++|||+ |+++... ...|+++|.++.....+..... .
T Consensus 143 ~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~------------~~~i~~~~~~g~~~~~~~~~g~---~ 206 (286)
T 1q7f_A 143 RVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR------------AHCVKVFNYEGQYLRQIGGEGI---T 206 (286)
T ss_dssp EEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG------------GTEEEEEETTCCEEEEESCTTT---S
T ss_pred EEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC------------CCEEEEEcCCCCEEEEEccCCc---c
Confidence 45566665532 22321 12345789999987 5555432 2378899988776665532100 0
Q ss_pred CccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcc-eEEeccCCCCCCCCceeccccCc--cccceeecCCC
Q 007620 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRD-IIYTQPAEPAEGEKPEILHKLDL--RFRSVSWCDDS 310 (595)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~-~~~~~d~~~~~g~~~~~l~~~~~--~~~~~~wspDg 310 (595)
..+..+.++++|. |+.... ... .+.+++. ++.....+..... ....+.++|||
T Consensus 207 --------~~p~~i~~d~~G~--l~v~~~-----------~~~~~i~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 207 --------NYPIGVGINSNGE--ILIADN-----------HNNFNLTIFTQ---DGQLISALESKVKHAQCFDVALMDDG 262 (286)
T ss_dssp --------CSEEEEEECTTCC--EEEEEC-----------SSSCEEEEECT---TSCEEEEEEESSCCSCEEEEEEETTT
T ss_pred --------CCCcEEEECCCCC--EEEEeC-----------CCCEEEEEECC---CCCEEEEEcccCCCCcceeEEECCCC
Confidence 1123467778875 544311 122 5666674 4322333322111 23467788888
Q ss_pred cEEEE
Q 007620 311 LALVN 315 (595)
Q Consensus 311 ~~l~~ 315 (595)
..++.
T Consensus 263 ~l~vs 267 (286)
T 1q7f_A 263 SVVLA 267 (286)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 75554
No 252
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=96.50 E-value=0.0044 Score=65.83 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=29.9
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEecc
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYP 521 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~ 521 (595)
..+.|.++.+||.+|.++|++|.+ . + |.|+||..||
T Consensus 40 ~~~~v~i~~~DG~~L~a~l~~P~~-~--~--~~P~vl~~~p 75 (560)
T 3iii_A 40 MEKDGTVEMRDGEKLYINIFRPNK-D--G--KFPVVMSADT 75 (560)
T ss_dssp EEEEEEEECTTSCEEEEEEEECSS-S--S--CEEEEEEEES
T ss_pred EEEEEEEECCCCcEEEEEEEecCC-C--C--CCCEEEEecC
Confidence 577899999999999999999986 1 3 4499998764
No 253
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=96.48 E-value=0.0035 Score=67.83 Aligned_cols=68 Identities=21% Similarity=0.284 Sum_probs=44.0
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCC--CCchh-HHHhccCeE
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM--TPTSS-LIFLARRFA 557 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~--~~~~~-q~la~~GY~ 557 (595)
..+.++++.+||.+|++++++|.+. +++ |+||++||- +.. ....+.....+ ..... |+||++||+
T Consensus 24 ~~~~v~i~~~DG~~L~~~~~~P~~~---~~~--P~vl~~hgy----g~~---~~~~~~~~~~~~~~~~~~~~~la~~Gy~ 91 (615)
T 1mpx_A 24 IKREVMIPMRDGVKLHTVIVLPKGA---KNA--PIVLTRTPY----DAS---GRTERLASPHMKDLLSAGDDVFVEGGYI 91 (615)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTC---CSE--EEEEEEESS----CHH---HHTCSSCCSSHHHHSCGGGHHHHHTTCE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCCC---CCe--eEEEEEcCC----CCc---cccccccccccccccchhHHHHHhCCeE
Confidence 6788999999999999999999864 334 999987642 000 00001110000 01122 899999999
Q ss_pred EEe
Q 007620 558 VLA 560 (595)
Q Consensus 558 Vl~ 560 (595)
||.
T Consensus 92 Vv~ 94 (615)
T 1mpx_A 92 RVF 94 (615)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 254
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.43 E-value=0.66 Score=44.07 Aligned_cols=181 Identities=13% Similarity=0.020 Sum_probs=95.9
Q ss_pred CceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCccccccccccc
Q 007620 60 CKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (595)
Q Consensus 60 ~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~ 139 (595)
....|+++|.++|+...-+..... .......++|||+.|+ ...
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~---~~~~~~~~~pdG~ilv-s~~--------------------------------- 55 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKG---WECNSVAATKAGEILF-SYS--------------------------------- 55 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTT---CCCCEEEECTTSCEEE-ECB---------------------------------
T ss_pred CCCEEEEEECCCCeEEEEeCCCcc---CCCcCeEECCCCCEEE-eCC---------------------------------
Confidence 347788889878875433322210 1245778899998666 310
Q ss_pred ccccCcCCccceEEeecceEEEEcCCCC-eeecCCC--CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcC
Q 007620 140 NLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTT 216 (595)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~lt~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~ 216 (595)
..++.+|.+|+ ...+..+ .....+.++|||+.|+..... ...++.+|.
T Consensus 56 -----------------~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~------------~~~v~~vd~ 106 (276)
T 3no2_A 56 -----------------KGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGH------------PSTILEVNM 106 (276)
T ss_dssp -----------------SEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST------------TEEEEEECT
T ss_pred -----------------CCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCC------------CCEEEEEeC
Confidence 12444444442 2223222 234577899999987765431 136788888
Q ss_pred CCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccc
Q 007620 217 DGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK 296 (595)
Q Consensus 217 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~ 296 (595)
+|+....+.-..... .+ ....+.....++|. +++.. .....++.+|. +| +..--..
T Consensus 107 ~Gk~l~~~~~~~~~~-~~------~~~~~~v~~~~~G~--~lv~~-----------~~~~~v~~~d~---~G-~~~w~~~ 162 (276)
T 3no2_A 107 KGEVLSKTEFETGIE-RP------HAQFRQINKNKKGN--YLVPL-----------FATSEVREIAP---NG-QLLNSVK 162 (276)
T ss_dssp TSCEEEEEEECCSCS-SG------GGSCSCCEECTTSC--EEEEE-----------TTTTEEEEECT---TS-CEEEEEE
T ss_pred CCCEEEEEeccCCCC-cc------cccccCceECCCCC--EEEEe-----------cCCCEEEEECC---CC-CEEEEEE
Confidence 777665543111000 00 00122345677776 32221 12345777785 54 4332222
Q ss_pred cCccccceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 297 LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 297 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
...........++|..++... ...+|+.+|++++
T Consensus 163 ~~~~~~~~~~~~~g~~~v~~~----~~~~v~~~d~~tG 196 (276)
T 3no2_A 163 LSGTPFSSAFLDNGDCLVACG----DAHCFVQLNLESN 196 (276)
T ss_dssp CSSCCCEEEECTTSCEEEECB----TTSEEEEECTTTC
T ss_pred CCCCccceeEcCCCCEEEEeC----CCCeEEEEeCcCC
Confidence 222333455678888776543 2237999999863
No 255
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=96.40 E-value=0.0024 Score=69.43 Aligned_cols=67 Identities=18% Similarity=0.281 Sum_probs=43.7
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCC----Cchh-HHHhccC
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT----PTSS-LIFLARR 555 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~----~~~~-q~la~~G 555 (595)
..|.++++.+||.+|+++|++|.+. +++ |+||+.||- .... +....+.... .... |+||++|
T Consensus 36 ~~~~v~i~~~DG~~L~~~l~~P~~~---~~~--PvIl~~hpy--g~~~------~~~~~~~~~~~~~~~~~~~~~la~~G 102 (652)
T 2b9v_A 36 IKREVMVPMRDGVKLYTVIVIPKNA---RNA--PILLTRTPY--NAKG------RANRVPNALTMREVLPQGDDVFVEGG 102 (652)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTC---CSE--EEEEEEESS--CHHH------HTCSSTTCSSHHHHSCGGGHHHHHTT
T ss_pred EEEEEEEECCCCcEEEEEEEecCCC---CCc--cEEEEECCC--CCCc------ccccccccccccccccchHHHHHhCC
Confidence 5688999999999999999999864 234 999987641 1000 0000111100 1123 8999999
Q ss_pred eEEEe
Q 007620 556 FAVLA 560 (595)
Q Consensus 556 Y~Vl~ 560 (595)
|+||.
T Consensus 103 yaVv~ 107 (652)
T 2b9v_A 103 YIRVF 107 (652)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 99998
No 256
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.39 E-value=0.59 Score=44.11 Aligned_cols=203 Identities=7% Similarity=-0.041 Sum_probs=99.8
Q ss_pred eeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCee
Q 007620 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (595)
Q Consensus 177 ~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~ 256 (595)
...+.|+||| +|++++.... ...|.++|+.+++...-...+. .........+++ .
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~----------~s~v~~iD~~tg~v~~~i~l~~-------------~~fgeGi~~~g~-~ 77 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYG----------RSSVRQVALQTGKVENIHKMDD-------------SYFGEGLTLLNE-K 77 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTT----------TCEEEEEETTTCCEEEEEECCT-------------TCCEEEEEEETT-E
T ss_pred cccEEEeCCC-eEEEECCCCC----------CCEEEEEECCCCCEEEEEecCC-------------CcceEEEEEeCC-E
Confidence 4578999995 6666643211 3479999998766543221110 011112223343 4
Q ss_pred EEEEEeecCCCcccccCCcceEEeccCCCCCCCCce-eccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCCC
Q 007620 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (595)
Q Consensus 257 l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~~ 335 (595)
||.... ..+.++++|. .+ .+.. .+.-. .......++||..++... +...|+.+|+++.+
T Consensus 78 lyv~t~-----------~~~~v~viD~--~t-~~v~~~i~~g--~~~g~glt~Dg~~l~vs~----gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 78 LYQVVW-----------LKNIGFIYDR--RT-LSNIKNFTHQ--MKDGWGLATDGKILYGSD----GTSILYEIDPHTFK 137 (266)
T ss_dssp EEEEET-----------TCSEEEEEET--TT-TEEEEEEECC--SSSCCEEEECSSSEEEEC----SSSEEEEECTTTCC
T ss_pred EEEEEe-----------cCCEEEEEEC--CC-CcEEEEEECC--CCCeEEEEECCCEEEEEC----CCCeEEEEECCCCc
Confidence 665522 2346777785 22 2222 22211 122344677887655432 23489999998842
Q ss_pred CCcEEE-eecccccccCCCCCCCeeeCCCCCEEEEEeeecCCcccEEEEecCCCCCCCCcceeEeeecCCCceeeeeecC
Q 007620 336 VAPRVL-FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (595)
Q Consensus 336 ~~~~~l-~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~l~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (595)
..+.+ ....-.. +..+ ..+.|. +| .+|+.... .. .+.++|++++++...+...
T Consensus 138 -v~~~I~Vg~~~~p-~~~~--nele~~-dg-~lyvn~~~----~~----------------~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 138 -LIKKHNVKYNGHR-VIRL--NELEYI-NG-EVWANIWQ----TD----------------CIARISAKDGTLLGWILLP 191 (266)
T ss_dssp -EEEEEECEETTEE-CCCE--EEEEEE-TT-EEEEEETT----SS----------------EEEEEETTTCCEEEEEECH
T ss_pred -EEEEEEECCCCcc-cccc--eeEEEE-CC-EEEEecCC----CC----------------eEEEEECCCCcEEEEEECC
Confidence 22333 1111000 0000 014455 55 45554321 11 2446899999876554321
Q ss_pred cc---------ccceeeEEeeeCCCcccccccCCEEEEEEecCCCcceEEEEeCC
Q 007620 415 RE---------KYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 460 (595)
Q Consensus 415 ~~---------~~~~~~~~~~~~~~~~~~s~d~~~l~~~~~s~~~p~~l~~~d~~ 460 (595)
.- .....+. +..+++++++++++... -+.+|.+++.
T Consensus 192 g~~~~~~~~~~~~~~v~n-------GIa~~~~~~~lfVTgk~---~~~v~~i~l~ 236 (266)
T 2iwa_A 192 NLRKKLIDEGFRDIDVLN-------GIAWDQENKRIFVTGKL---WPKLFEIKLH 236 (266)
T ss_dssp HHHHHHHHTTCTTCCCEE-------EEEEETTTTEEEEEETT---CSEEEEEEEE
T ss_pred CcccccccccccccCceE-------EEEEcCCCCEEEEECCC---CCeEEEEEEe
Confidence 00 0001122 24578888988887633 3567777754
No 257
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=96.38 E-value=0.0061 Score=61.61 Aligned_cols=40 Identities=13% Similarity=0.302 Sum_probs=34.8
Q ss_pred ceEEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEEeccC
Q 007620 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPE 522 (595)
Q Consensus 481 ~~e~v~~~~~-DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~ 522 (595)
..+.++|++. ||.++++++++|.++++++++ |+||++|++
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~--Pvvv~lHG~ 183 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPDRKY--PLVVFLHGA 183 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTTSCE--EEEEEECCG
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCCCCc--cEEEEECCC
Confidence 5778899999 999999999999998876655 999998864
No 258
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=96.30 E-value=0.0028 Score=61.74 Aligned_cols=68 Identities=9% Similarity=0.074 Sum_probs=47.9
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
..+.+++++.||.+|+++++.|.+ . + +.|+||++|+. ...+ ...+.....|+++||+|+.
T Consensus 55 ~~~~~~~~~~~g~~i~~~~~~P~~-~--~--~~p~vv~~HG~--------------~~~~-~~~~~~~~~l~~~g~~v~~ 114 (318)
T 1l7a_A 55 KVYRLTYKSFGNARITGWYAVPDK-E--G--PHPAIVKYHGY--------------NASY-DGEIHEMVNWALHGYATFG 114 (318)
T ss_dssp EEEEEEEEEGGGEEEEEEEEEESS-C--S--CEEEEEEECCT--------------TCCS-GGGHHHHHHHHHTTCEEEE
T ss_pred EEEEEEEEccCCCEEEEEEEeeCC-C--C--CccEEEEEcCC--------------CCCC-CCCcccccchhhCCcEEEE
Confidence 678899999999999999999986 2 2 34999998743 1110 0111223578899999999
Q ss_pred CCCCceeec
Q 007620 561 GPSIPIIGE 569 (595)
Q Consensus 561 ~~~~~~~~~ 569 (595)
++.+..|.
T Consensus 115 -~d~rg~g~ 122 (318)
T 1l7a_A 115 -MLVRGQQR 122 (318)
T ss_dssp -ECCTTTSS
T ss_pred -ecCCCCCC
Confidence 77665553
No 259
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=96.25 E-value=0.0026 Score=60.98 Aligned_cols=71 Identities=17% Similarity=0.255 Sum_probs=46.8
Q ss_pred ceEEEEEEC-CCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 481 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~-~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
..+.+++.+ .+|.++..++++|+++++++++ |+||++|+.. +....|... ....++++.+||+|+
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~--p~vv~lHG~~-----------~~~~~~~~~-~~~~~~~~~~g~~vv 81 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQASTGAKV--PVLYWLSGLT-----------CSDENFMQK-AGAQRLAAELGIAIV 81 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGTTCCE--EEEEEECCTT-----------CCSSHHHHH-SCCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCCCCCCc--cEEEEecCCC-----------CChhHHhhc-ccHHHHHhhCCeEEE
Confidence 455566654 5899999999999998765545 9999987531 111112111 112468888899999
Q ss_pred eCCCCce
Q 007620 560 AGPSIPI 566 (595)
Q Consensus 560 ~~~~~~~ 566 (595)
. |+.+.
T Consensus 82 ~-pd~~~ 87 (280)
T 3i6y_A 82 A-PDTSP 87 (280)
T ss_dssp E-ECSSC
T ss_pred E-eCCcc
Confidence 9 66543
No 260
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.19 E-value=0.88 Score=43.02 Aligned_cols=191 Identities=12% Similarity=0.076 Sum_probs=99.2
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
.+....++|||+ |.+. . .....|++++.+ ++...+...... .....+.++++|+. ++...
T Consensus 16 ~~~~i~~d~~g~-l~v~-~--------~~~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g~l-~v~~~----- 75 (299)
T 2z2n_A 16 GPYGITVSDKGK-VWIT-Q--------HKANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDGEV-WFTEN----- 75 (299)
T ss_dssp CEEEEEECTTSC-EEEE-E--------TTTTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTSCE-EEEET-----
T ss_pred CccceEECCCCC-EEEE-e--------cCCCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCCCE-EEeCC-----
Confidence 567888999997 4343 2 224679999988 765554321110 13456778888874 33211
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCCeeecC---CCCeeeeeEECCCCCe
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFG---TPAVYTAVEPSPDQKY 188 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~lt---~~~~~~~~~~SpDg~~ 188 (595)
....|++++.+|+.+.+. .......+.++|||+
T Consensus 76 -------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~- 111 (299)
T 2z2n_A 76 -------------------------------------------AANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGD- 111 (299)
T ss_dssp -------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSC-
T ss_pred -------------------------------------------CCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCC-
Confidence 012355555555433332 122345788889885
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCc
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~ 268 (595)
|+++... ...|+++|.+ ++...+.... . ......+.+.++|. +++..
T Consensus 112 l~v~~~~------------~~~i~~~d~~-g~~~~~~~~~-~----------~~~~~~i~~~~~g~--l~v~~------- 158 (299)
T 2z2n_A 112 IWFTEMN------------GNRIGRITDD-GKIREYELPN-K----------GSYPSFITLGSDNA--LWFTE------- 158 (299)
T ss_dssp EEEEETT------------TTEEEEECTT-CCEEEEECSS-T----------TCCEEEEEECTTSC--EEEEE-------
T ss_pred EEEEecC------------CceEEEECCC-CCEEEecCCC-C----------CCCCceEEEcCCCC--EEEEe-------
Confidence 5555422 2368888884 3333322100 0 01123455666764 54431
Q ss_pred ccccCCcceEEeccCCCCCCCCceecc--ccCccccceeecCCCcEEEEEEeecccceEEEEEeC
Q 007620 269 NVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (595)
Q Consensus 269 ~~~~~~~~~~~~~d~~~~~g~~~~~l~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~ 331 (595)
.....++.++. + ++...+. ........+.++++|..++... ....|+++|+
T Consensus 159 ----~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~----~~~~i~~~~~ 211 (299)
T 2z2n_A 159 ----NQNNAIGRITE---S-GDITEFKIPTPASGPVGITKGNDDALWFVEI----IGNKIGRITT 211 (299)
T ss_dssp ----TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECTTSSEEEEET----TTTEEEEECT
T ss_pred ----CCCCEEEEEcC---C-CcEEEeeCCCCCCcceeEEECCCCCEEEEcc----CCceEEEECC
Confidence 11235666663 3 3443321 1122344567788887555432 2237899998
No 261
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.13 E-value=1.4 Score=44.78 Aligned_cols=29 Identities=17% Similarity=0.149 Sum_probs=17.7
Q ss_pred ccccccCCEEEEEEecCCCcceEEEEeCC
Q 007620 432 EDINLNQLKILTSKESKTEITQYHILSWP 460 (595)
Q Consensus 432 ~~~s~d~~~l~~~~~s~~~p~~l~~~d~~ 460 (595)
..|++++..++....+......++++|..
T Consensus 413 ~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 413 IRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred EEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 35777766555544444446778888864
No 262
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=96.06 E-value=0.012 Score=53.25 Aligned_cols=72 Identities=14% Similarity=0.087 Sum_probs=48.3
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCC-CCchhHHHhccCeEEE
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM-TPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~-~~~~~q~la~~GY~Vl 559 (595)
..|.+++++.|| +|+++++.|.+ . + +.|+||++|+.+.. ++.. ... .....+.|+++||.|+
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~-~--~--~~~~vv~~HG~~~~---------~~~~--~~~~~~~~~~~l~~~g~~v~ 67 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG-I--E--KSVTGIICHPHPLH---------GGTM--NNKVVTTLAKALDELGLKTV 67 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS-C--C--CSEEEEEECSCGGG---------TCCT--TCHHHHHHHHHHHHTTCEEE
T ss_pred ccceEEEECCCc-eEEEEEEcCCC-C--C--CCCEEEEEcCCCCC---------CCcc--CCchHHHHHHHHHHCCCEEE
Confidence 577899999999 99999999975 1 1 33999997752110 1110 000 0123478999999999
Q ss_pred eCCCCceeecC
Q 007620 560 AGPSIPIIGEG 570 (595)
Q Consensus 560 ~~~~~~~~~~~ 570 (595)
. ++.+..|..
T Consensus 68 ~-~d~~g~g~s 77 (208)
T 3trd_A 68 R-FNFRGVGKS 77 (208)
T ss_dssp E-ECCTTSTTC
T ss_pred E-EecCCCCCC
Confidence 9 888776653
No 263
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.02 E-value=0.28 Score=48.37 Aligned_cols=63 Identities=13% Similarity=0.040 Sum_probs=37.3
Q ss_pred eeeEEEecCCCCCCCCc-eeeecCCCC-----CcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecc
Q 007620 5 TGIGIHRLLPDDSLGPE-KEVHGYPDG-----AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF 78 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~-~~lt~~~~~-----~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt 78 (595)
..|++.|+. +|+. +.+. ++.. ......+++|++..+ |++.... .....|+++++++|+..++.
T Consensus 93 ~~i~~~d~~----tg~~~~~~~-~~~~~~~~~~~~~~v~vd~~~g~~-yvtd~~~-----~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 93 PKLVAWDTL----NNQLSRVIY-LPPPITLSNSFVNDLAVDLIHNFV-YISDPAP-----DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp CEEEEEETT----TTEEEEEEE-CCTTTSCTTCCCCEEEEETTTTEE-EEEECCS-----GGGCEEEEEETTTCCEEEEC
T ss_pred CeEEEEECC----CCeEEEEEE-CChhhcccccccceEEEecCCCEE-EEEcCcc-----CCCCeEEEEECCCCCEEEEe
Confidence 346666776 6663 3333 3321 134678999987655 4443210 13578999999988866653
No 264
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=95.92 E-value=0.0097 Score=60.52 Aligned_cols=80 Identities=19% Similarity=0.299 Sum_probs=48.7
Q ss_pred ceEEEEEECCC--C--cEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcc--cCCCCchhHHHhcc
Q 007620 481 QKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF--SGMTPTSSLIFLAR 554 (595)
Q Consensus 481 ~~e~v~~~~~D--G--~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~--~~~~~~~~q~la~~ 554 (595)
....+.|++.| | ..+.|+|++|.+..+.+ +.|+||++|+...+.. . ..+..+ ...+....+.|+++
T Consensus 45 ~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~~~--~~P~vv~~HG~~~~~~----~--~~~~~~~~~~~~~~~~~~l~~~ 116 (397)
T 3h2g_A 45 RVAEFTYATIGVEGEPATASGVLLIPGGERCSG--PYPLLGWGHPTEALRA----Q--EQAKEIRDAKGDDPLVTRLASQ 116 (397)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEECTTCCS--CEEEEEEECCCCCBTT----C--CHHHHHHHTTTCSHHHHTTGGG
T ss_pred EEEEEEEEecCCCCCeEEEEEEEEeCCCCCCCC--CCcEEEEeCCCcCCCC----c--ccccccccccchHHHHHHHHHC
Confidence 55666776554 5 46999999999865433 4499999875321100 0 000000 01122346789999
Q ss_pred CeEEEeCCCCceeec
Q 007620 555 RFAVLAGPSIPIIGE 569 (595)
Q Consensus 555 GY~Vl~~~~~~~~~~ 569 (595)
||+|+. +|.+..|.
T Consensus 117 G~~V~~-~D~~G~G~ 130 (397)
T 3h2g_A 117 GYVVVG-SDYLGLGK 130 (397)
T ss_dssp TCEEEE-ECCTTSTT
T ss_pred CCEEEE-ecCCCCCC
Confidence 999999 77776664
No 265
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.92 E-value=1.2 Score=47.78 Aligned_cols=199 Identities=15% Similarity=0.110 Sum_probs=106.0
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCce-EecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~-~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~ 110 (595)
......|++++.+|+++- -....|+++++++... ..+....-. ....++..+.++.|+++-.
T Consensus 41 ~~~~ld~~~~~~~ly~sD---------~~~~~I~r~~~~g~~~~~~v~~~~~~----~P~GlAvD~~~~~ly~~d~---- 103 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSD---------VSEEAIKRTEFNKTESVQNVVVSGLL----SPDGLACDWLGEKLYWTDS---- 103 (619)
T ss_dssp CEEEEEEETTTTEEEEEE---------TTTTEEEEEEC-----CEEEECSSCS----CEEEEEEETTTTEEEEEET----
T ss_pred ceEEEEEEeCCCEEEEEE---------CCCCeEEEEEccCCCceEEEEeCCCC----CcCeEEEEecCCEEEEEeC----
Confidence 466778999888887753 2346789999876532 222211100 2346777777777777611
Q ss_pred CCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCCe-eecCCCC--eeeeeEECCCCC
Q 007620 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTA-KDFGTPA--VYTAVEPSPDQK 187 (595)
Q Consensus 111 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~lt~~~--~~~~~~~SpDg~ 187 (595)
...+|.+++++|.. +.|.... ....+++.|.+.
T Consensus 104 --------------------------------------------~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g 139 (619)
T 3s94_A 104 --------------------------------------------ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSG 139 (619)
T ss_dssp --------------------------------------------TTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTT
T ss_pred --------------------------------------------CCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCC
Confidence 12457777887743 3333222 234788999888
Q ss_pred eEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCC
Q 007620 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (595)
Q Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~ 267 (595)
+|+++.... ...|++.+++|...+.+..... ..+..+...++++ .|||...
T Consensus 140 ~ly~tD~g~-----------~~~I~r~~~dG~~~~~l~~~~~------------~~P~Glald~~~~-~LY~aD~----- 190 (619)
T 3s94_A 140 FMYWTDWGE-----------VPKIERAGMDGSSRFIIINSEI------------YWPNGLTLDYEEQ-KLYWADA----- 190 (619)
T ss_dssp EEEEEECSS-----------SCEEEEEETTSCSCEEEECSSC------------SSEEEEEEETTTT-EEEEEET-----
T ss_pred eEEEeccCC-----------CCEEEEEECCCCceEEEEeCCC------------CCCcEEEEEccCC-EEEEEeC-----
Confidence 888885321 2378888998876666543211 0122456666655 4877631
Q ss_pred cccccCCcceEEeccCCCCCCCCceeccccC-ccccceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 268 ~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
..+.++.++. +|...+.+.... .....+.+..| .++...+ ....|+++|..++
T Consensus 191 ------~~~~I~~~~~---dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~---~~~~V~~~d~~tg 244 (619)
T 3s94_A 191 ------KLNFIHKSNL---DGTNRQAVVKGSLPHPFALTLFED--ILYWTDW---STHSILACNKYTG 244 (619)
T ss_dssp ------TTCCEEEESS---SCCEEC---------CCCEEESSS--EEEEECT---TTCSEEEEESSSC
T ss_pred ------CCCeEEEecC---CCCccEEEEeCCCCCceEEEEeCC--EEEEecC---CCCEEEEEECCCC
Confidence 1235666675 554443333211 11223334333 3333322 3346888888664
No 266
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=95.91 E-value=0.016 Score=56.85 Aligned_cols=63 Identities=16% Similarity=0.276 Sum_probs=42.5
Q ss_pred CceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHh-ccCeEE
Q 007620 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAV 558 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la-~~GY~V 558 (595)
+..+.+++.+.||.+|.+++|+|.+ + +.|+||++|++-+ +.|... .+......|| ..||+|
T Consensus 58 ~~~~~~~i~~~~G~~i~~~~~~P~~----~--~~p~vv~~HGgG~--------~~g~~~----~~~~~~~~la~~~g~~v 119 (317)
T 3qh4_A 58 VAVADDVVTGEAGRPVPVRIYRAAP----T--PAPVVVYCHAGGF--------ALGNLD----TDHRQCLELARRARCAV 119 (317)
T ss_dssp CEEEEEEEECTTSCEEEEEEEECSC----S--SEEEEEEECCSTT--------TSCCTT----TTHHHHHHHHHHHTSEE
T ss_pred ceEEEEEecCCCCCeEEEEEEecCC----C--CCcEEEEECCCcC--------ccCChH----HHHHHHHHHHHHcCCEE
Confidence 4678899999999999999999976 2 3499999875311 111111 1112235566 559999
Q ss_pred Ee
Q 007620 559 LA 560 (595)
Q Consensus 559 l~ 560 (595)
+.
T Consensus 120 v~ 121 (317)
T 3qh4_A 120 VS 121 (317)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 267
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=95.87 E-value=0.0048 Score=57.37 Aligned_cols=67 Identities=15% Similarity=0.123 Sum_probs=46.4
Q ss_pred CceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
+..+.++++. +|.++.++++.|.+-. + +.|+||++|+- ++... ......+.|+++||.|+
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~p~~~~--~--~~p~vv~~HG~------------~g~~~---~~~~~~~~l~~~G~~v~ 63 (241)
T 3f67_A 4 IIAGETSIPS-QGENMPAYHARPKNAD--G--PLPIVIVVQEI------------FGVHE---HIRDLCRRLAQEGYLAI 63 (241)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEETTCC--S--CEEEEEEECCT------------TCSCH---HHHHHHHHHHHTTCEEE
T ss_pred ceeeeEEEec-CCcceEEEEecCCCCC--C--CCCEEEEEcCc------------CccCH---HHHHHHHHHHHCCcEEE
Confidence 3577889988 9999999999998632 2 44999998741 11111 11123578999999999
Q ss_pred eCCCCcee
Q 007620 560 AGPSIPII 567 (595)
Q Consensus 560 ~~~~~~~~ 567 (595)
. ++.+..
T Consensus 64 ~-~d~~g~ 70 (241)
T 3f67_A 64 A-PELYFR 70 (241)
T ss_dssp E-ECTTTT
T ss_pred E-eccccc
Confidence 9 776544
No 268
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=95.84 E-value=0.018 Score=54.74 Aligned_cols=40 Identities=30% Similarity=0.436 Sum_probs=32.3
Q ss_pred ceEEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEEeccC
Q 007620 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPE 522 (595)
Q Consensus 481 ~~e~v~~~~~-DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~ 522 (595)
+.+.++|.+. +|.++..++++|.++++++++ |+||++|+.
T Consensus 31 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~--P~vv~lHG~ 71 (268)
T 1jjf_A 31 QVVNISYFSTATNSTRPARVYLPPGYSKDKKY--SVLYLLHGI 71 (268)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCCTTSCB--CEEEEECCT
T ss_pred eEEEEEEeccccCCceEEEEEeCCCCCCCCCc--cEEEEECCC
Confidence 6777888765 688999999999998765545 999998753
No 269
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.77 E-value=1.3 Score=41.45 Aligned_cols=113 Identities=6% Similarity=-0.060 Sum_probs=57.7
Q ss_pred eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCe
Q 007620 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (595)
Q Consensus 176 ~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~ 255 (595)
+...+.|+ |+ .|+.+..... ...|.++|++++++..-...+. ........+++.
T Consensus 44 ftqGL~~~-~~-~LyestG~~g----------~S~v~~vD~~Tgkv~~~~~l~~-------------~~FgeGit~~g~- 97 (262)
T 3nol_A 44 FTEGFFYR-NG-YFYESTGLNG----------RSSIRKVDIESGKTLQQIELGK-------------RYFGEGISDWKD- 97 (262)
T ss_dssp EEEEEEEE-TT-EEEEEEEETT----------EEEEEEECTTTCCEEEEEECCT-------------TCCEEEEEEETT-
T ss_pred ccceEEEE-CC-EEEEECCCCC----------CceEEEEECCCCcEEEEEecCC-------------ccceeEEEEeCC-
Confidence 44578888 54 6666653321 2478899998776533222210 011111233444
Q ss_pred eEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccceEEEEEeCCCC
Q 007620 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 256 ~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
.||.+.+. .+.++++|. .+. +...-..... .....++|+..|+..+ +...|+.+|+.+.
T Consensus 98 ~ly~ltw~-----------~~~v~v~D~--~t~-~~~~ti~~~~--eG~glt~dg~~L~~Sd----Gs~~i~~iDp~T~ 156 (262)
T 3nol_A 98 KIVGLTWK-----------NGLGFVWNI--RNL-RQVRSFNYDG--EGWGLTHNDQYLIMSD----GTPVLRFLDPESL 156 (262)
T ss_dssp EEEEEESS-----------SSEEEEEET--TTC-CEEEEEECSS--CCCCEEECSSCEEECC----SSSEEEEECTTTC
T ss_pred EEEEEEee-----------CCEEEEEEC--ccC-cEEEEEECCC--CceEEecCCCEEEEEC----CCCeEEEEcCCCC
Confidence 46655321 246777785 222 3222111111 2234457877665542 2347999999884
No 270
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=95.74 E-value=0.0055 Score=58.66 Aligned_cols=69 Identities=16% Similarity=0.304 Sum_probs=43.9
Q ss_pred ceEEEEEE-CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 481 QKEMIKYQ-RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~-~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
..+.+++. ..+|.++...+++|+++++ + +.|+||++|+... ....|... ....++++++||+|+
T Consensus 15 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~-~--~~p~vv~lHG~~~-----------~~~~~~~~-~~~~~~~~~~g~~vv 79 (282)
T 3fcx_A 15 LQKVFEHDSVELNCKMKFAVYLPPKAET-G--KCPALYWLSGLTC-----------TEQNFISK-SGYHQSASEHGLVVI 79 (282)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGT-S--CEEEEEEECCTTC-----------CSHHHHHH-SCCHHHHHHHTCEEE
T ss_pred cEEEEEEEchhcCCeeEEEEEcCCCCCC-C--CCCEEEEEcCCCC-----------Cccchhhc-chHHHHhhcCCeEEE
Confidence 34444554 4589999999999998764 3 4499999875310 00111111 012478899999999
Q ss_pred eCCCCc
Q 007620 560 AGPSIP 565 (595)
Q Consensus 560 ~~~~~~ 565 (595)
. |+.+
T Consensus 80 ~-~d~~ 84 (282)
T 3fcx_A 80 A-PDTS 84 (282)
T ss_dssp E-ECSC
T ss_pred E-eccc
Confidence 9 6653
No 271
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=95.70 E-value=0.022 Score=55.99 Aligned_cols=62 Identities=13% Similarity=0.230 Sum_probs=41.7
Q ss_pred CceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhc-cCeEE
Q 007620 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAV 558 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~-~GY~V 558 (595)
+..+.+++++.|| +|.+++|+|.+. .. |+||++|++.| +.|....+ ......||+ +||+|
T Consensus 61 ~~~~~~~~~~~~g-~i~~~~~~p~~~----~~--p~vv~~HGgg~--------~~g~~~~~----~~~~~~la~~~g~~V 121 (326)
T 3ga7_A 61 MTTRTCAVPTPYG-DVTTRLYSPQPT----SQ--ATLYYLHGGGF--------ILGNLDTH----DRIMRLLARYTGCTV 121 (326)
T ss_dssp CEEEEEEECCTTS-CEEEEEEESSSS----CS--CEEEEECCSTT--------TSCCTTTT----HHHHHHHHHHHCSEE
T ss_pred cceEEEEeecCCC-CeEEEEEeCCCC----CC--cEEEEECCCCc--------ccCChhhh----HHHHHHHHHHcCCEE
Confidence 3458999999999 899999999752 12 99999875311 11111111 112457777 79999
Q ss_pred Ee
Q 007620 559 LA 560 (595)
Q Consensus 559 l~ 560 (595)
+.
T Consensus 122 ~~ 123 (326)
T 3ga7_A 122 IG 123 (326)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 272
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=95.67 E-value=0.0081 Score=64.51 Aligned_cols=67 Identities=25% Similarity=0.402 Sum_probs=44.5
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchh-HHHhccCeEEE
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~-q~la~~GY~Vl 559 (595)
..+.++++.+||.+|.+.+++|.+ . + +.|+||+.||. |........+.... ++||++||+|+
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~--~-~--~~P~vv~~~~~------------g~~~~~~~~y~~~~~~~la~~Gy~vv 70 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDA--D-G--PVPVLLVRNPY------------DKFDVFAWSTQSTNWLEFVRDGYAVV 70 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC--S-S--CEEEEEEEESS------------CTTCHHHHHTTTCCTHHHHHTTCEEE
T ss_pred EEEEEEEECCCCCEEEEEEEECCC--C-C--CeeEEEEECCc------------CCCccccccchhhHHHHHHHCCCEEE
Confidence 467799999999999999999975 1 2 34999987642 11111000001123 89999999999
Q ss_pred eCCCCc
Q 007620 560 AGPSIP 565 (595)
Q Consensus 560 ~~~~~~ 565 (595)
. .+..
T Consensus 71 ~-~D~R 75 (587)
T 3i2k_A 71 I-QDTR 75 (587)
T ss_dssp E-EECT
T ss_pred E-EcCC
Confidence 8 4443
No 273
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=95.55 E-value=0.011 Score=56.69 Aligned_cols=68 Identities=12% Similarity=0.197 Sum_probs=43.2
Q ss_pred eEEEEE-ECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 482 KEMIKY-QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 482 ~e~v~~-~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
.+.+++ ...+|.++..++++|++++ ++++ |+||++|+.. +....|... ....++++.+||+|+.
T Consensus 22 ~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~--p~vv~lHG~~-----------~~~~~~~~~-~~~~~~~~~~g~~vv~ 86 (283)
T 4b6g_A 22 QQVWAHHAQTLQCEMKFAVYLPNNPE-NRPL--GVIYWLSGLT-----------CTEQNFITK-SGFQRYAAEHQVIVVA 86 (283)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCTT-CCCE--EEEEEECCTT-----------CCSHHHHHH-SCTHHHHHHHTCEEEE
T ss_pred EEEEEEechhhCCceEEEEEeCCCCC-CCCC--CEEEEEcCCC-----------CCccchhhc-ccHHHHHhhCCeEEEE
Confidence 344444 4457899999999999986 3434 9999987531 011112110 1124688889999999
Q ss_pred CCCCc
Q 007620 561 GPSIP 565 (595)
Q Consensus 561 ~~~~~ 565 (595)
|+.+
T Consensus 87 -~d~~ 90 (283)
T 4b6g_A 87 -PDTS 90 (283)
T ss_dssp -ECSS
T ss_pred -eccc
Confidence 6654
No 274
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=95.49 E-value=0.016 Score=52.93 Aligned_cols=74 Identities=12% Similarity=0.134 Sum_probs=48.2
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
..+.+++++.|| ++.++++.|.+-.+ ++ .|+||++|+... +++... ........+.|+++||.|+.
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~~~-~~--~~~vv~~HG~~~---------~~~~~~-~~~~~~~~~~l~~~g~~v~~ 74 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPDVA-VQ--PVTAIVCHPLST---------EGGSMH-NKVVTMAARALRELGITVVR 74 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTSC-CC--SEEEEEECSCTT---------TTCSTT-CHHHHHHHHHHHTTTCEEEE
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCCCc-cc--cCEEEEECCCCC---------cCCccc-chHHHHHHHHHHHCCCeEEE
Confidence 678899999999 99999999986311 12 399999774211 011100 00001234788999999999
Q ss_pred CCCCceeec
Q 007620 561 GPSIPIIGE 569 (595)
Q Consensus 561 ~~~~~~~~~ 569 (595)
++.+..|.
T Consensus 75 -~d~~g~g~ 82 (220)
T 2fuk_A 75 -FNFRSVGT 82 (220)
T ss_dssp -ECCTTSTT
T ss_pred -EecCCCCC
Confidence 77776654
No 275
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=95.47 E-value=0.011 Score=56.44 Aligned_cols=72 Identities=14% Similarity=0.182 Sum_probs=45.3
Q ss_pred ceEEEEEE-CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 481 QKEMIKYQ-RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~-~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
..+.+++. ..+|.++..++++|++++ ++ +.|+||++|+.. +....|.... ...++++..||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~--~~p~vv~lHG~~-----------~~~~~~~~~~-~~~~~~~~~g~~vv 78 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKAI-HE--PCPVVWYLSGLT-----------CTHANVMEKG-EYRRMASELGLVVV 78 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG-TS--CEEEEEEECCTT-----------CCSHHHHHHS-CCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCcceEEEEcCCCCC-CC--CCCEEEEEcCCC-----------CCccchhhcc-cHHHHHhhCCeEEE
Confidence 45556664 558999999999999875 33 349999987531 1111111110 12356777799999
Q ss_pred eCCCCceee
Q 007620 560 AGPSIPIIG 568 (595)
Q Consensus 560 ~~~~~~~~~ 568 (595)
. |+.+..|
T Consensus 79 ~-~d~~g~G 86 (278)
T 3e4d_A 79 C-PDTSPRG 86 (278)
T ss_dssp E-CCSSCCS
T ss_pred e-cCCcccC
Confidence 9 7766444
No 276
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=95.44 E-value=0.0052 Score=56.93 Aligned_cols=65 Identities=20% Similarity=0.216 Sum_probs=44.8
Q ss_pred EEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCC
Q 007620 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (595)
Q Consensus 483 e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~ 562 (595)
|.+++++.||.+|+++++.|.+ + +.|+||++|+. .+....+ ....+.|+++||.|+. +
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~----~--~~p~vv~~hG~-----------~~~~~~~----~~~~~~l~~~g~~v~~-~ 61 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK----A--PAPVIVIAQDI-----------FGVNAFM----RETVSWLVDQGYAAVC-P 61 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS----C--SEEEEEEECCT-----------TBSCHHH----HHHHHHHHHTTCEEEE-E
T ss_pred ceEEEecCCCCeEEEEEECCCC----C--CCCEEEEEcCC-----------CCCCHHH----HHHHHHHHhCCcEEEe-c
Confidence 4567888999999999999974 2 23999997742 0111111 1235788999999999 7
Q ss_pred CCceeec
Q 007620 563 SIPIIGE 569 (595)
Q Consensus 563 ~~~~~~~ 569 (595)
+.+..|.
T Consensus 62 d~~g~g~ 68 (236)
T 1zi8_A 62 DLYARQA 68 (236)
T ss_dssp CGGGGTS
T ss_pred cccccCC
Confidence 7776554
No 277
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=95.41 E-value=0.01 Score=56.61 Aligned_cols=70 Identities=16% Similarity=0.227 Sum_probs=40.9
Q ss_pred EEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCC
Q 007620 485 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 564 (595)
Q Consensus 485 v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~ 564 (595)
.+|...||.+|++++..|....+++ +.|+||++|++.+. .+. ........+.|+++||+|+. ++.
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~--~~p~vv~~HGgg~~--------~~~----~~~~~~~~~~l~~~G~~v~~-~d~ 81 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENY--TFPAIIICPGGGYQ--------HIS----QRESDPLALAFLAQGYQVLL-LNY 81 (276)
T ss_dssp EECCCBTTBEEEEECCCC------C--CBCEEEEECCSTTT--------SCC----GGGSHHHHHHHHHTTCEEEE-EEC
T ss_pred ccccCCCCeEEEEEEeCCcccccCC--CCCEEEEEcCCccc--------cCC----chhhHHHHHHHHHCCCEEEE-ecC
Confidence 4567789999999988876543333 44999998753110 011 11111234789999999999 555
Q ss_pred ceeec
Q 007620 565 PIIGE 569 (595)
Q Consensus 565 ~~~~~ 569 (595)
+..|.
T Consensus 82 ~g~g~ 86 (276)
T 3hxk_A 82 TVMNK 86 (276)
T ss_dssp CCTTS
T ss_pred ccCCC
Confidence 54443
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.41 E-value=0.4 Score=49.02 Aligned_cols=145 Identities=12% Similarity=0.154 Sum_probs=83.0
Q ss_pred ccceEEcc-CCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 007620 33 INFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (595)
Q Consensus 33 ~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~ 111 (595)
...+.++| ++..|++ +.. . ..|.+++++++..+.+..... ....+.|+++|+.|+++-...
T Consensus 139 P~~lavdp~~~g~Lyv-~d~--------~-~~I~~id~~~~~v~~~~~~~~-----~P~~ia~d~~G~~lyvad~~~--- 200 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYL-VGE--------Q-HPTRLIDFEKEYVSTVYSGLS-----KVRTICWTHEADSMIITNDQN--- 200 (430)
T ss_dssp CCEEEEETTEEEEEEE-EEB--------T-EEEEEEETTTTEEEEEECCCS-----CEEEEEECTTSSEEEEEECCS---
T ss_pred CCEEEECCCCCCeEEE-EeC--------C-CcEEEEECCCCEEEEEecCCC-----CcceEEEeCCCCEEEEEeCCC---
Confidence 45678998 4656544 432 2 789999999887766643221 345789999999888762210
Q ss_pred CCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCCCe---eecCCCCeeeeeEECCCCCe
Q 007620 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTA---KDFGTPAVYTAVEPSPDQKY 188 (595)
Q Consensus 112 ~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~---~~lt~~~~~~~~~~SpDg~~ 188 (595)
++ ....+++++.+|.. +.+........++++|++.+
T Consensus 201 ------------------~~-----------------------~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~ 239 (430)
T 3tc9_A 201 ------------------NN-----------------------DRPNNYILTRESGFKVITELTKGQNCNGAETHPINGE 239 (430)
T ss_dssp ------------------CT-----------------------TSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCC
T ss_pred ------------------Cc-----------------------ccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCE
Confidence 00 00123333333321 12221122346789996667
Q ss_pred EEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceeecCCCeeEEEE
Q 007620 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (595)
Q Consensus 189 l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~ 260 (595)
|+++... ..+|++++.+++....+...+.. ..++.+.++|+|+ .||+.
T Consensus 240 lyv~d~~------------~~~V~~~~~~~~~~~~~~~~~~~-----------~~P~gia~~pdG~-~lyv~ 287 (430)
T 3tc9_A 240 LYFNSWN------------AGQVFRYDFTTQETTPLFTIQDS-----------GWEFHIQFHPSGN-YAYIV 287 (430)
T ss_dssp EEEEETT------------TTEEEEEETTTTEEEEEEECSSS-----------SCCEEEEECTTSS-EEEEE
T ss_pred EEEEECC------------CCEEEEEECCCCcEEEEEEcCCC-----------CcceeEEEcCCCC-EEEEE
Confidence 8777532 24799999988776444322110 1134588899987 36554
No 279
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.33 E-value=1.9 Score=40.55 Aligned_cols=130 Identities=13% Similarity=0.104 Sum_probs=65.7
Q ss_pred eEEEEcCCCCeeecCC---CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCC
Q 007620 158 QLVLGSLDGTAKDFGT---PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (595)
Q Consensus 158 ~l~~~d~~g~~~~lt~---~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~ 234 (595)
.|++++.+|+...+.. ......+.++++|+ |+++... ...|+++|. +++...+.. +...
T Consensus 121 ~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~------------~~~i~~~~~-~g~~~~~~~-~~~~--- 182 (299)
T 2z2n_A 121 RIGRITDDGKIREYELPNKGSYPSFITLGSDNA-LWFTENQ------------NNAIGRITE-SGDITEFKI-PTPA--- 182 (299)
T ss_dssp EEEEECTTCCEEEEECSSTTCCEEEEEECTTSC-EEEEETT------------TTEEEEECT-TCCEEEEEC-SSTT---
T ss_pred eEEEECCCCCEEEecCCCCCCCCceEEEcCCCC-EEEEeCC------------CCEEEEEcC-CCcEEEeeC-CCCC---
Confidence 4566666554443321 12345788999985 5555422 236888998 554444311 1000
Q ss_pred ccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccc--cCccccceeecCCCcE
Q 007620 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRFRSVSWCDDSLA 312 (595)
Q Consensus 235 ~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~--~~~~~~~~~wspDg~~ 312 (595)
.....+...++|. |++.. .....+++++. ++ +...+.. .......+.++++|..
T Consensus 183 -------~~~~~i~~~~~g~--l~v~~-----------~~~~~i~~~~~---~g-~~~~~~~~~~~~~~~~i~~~~~g~l 238 (299)
T 2z2n_A 183 -------SGPVGITKGNDDA--LWFVE-----------IIGNKIGRITT---SG-EITEFKIPTPNARPHAITAGAGIDL 238 (299)
T ss_dssp -------CCEEEEEECTTSS--EEEEE-----------TTTTEEEEECT---TC-CEEEEECSSTTCCEEEEEECSTTCE
T ss_pred -------CcceeEEECCCCC--EEEEc-----------cCCceEEEECC---CC-cEEEEECCCCCCCceeEEECCCCCE
Confidence 1122455666665 54431 11235666663 33 4333211 1123456778888885
Q ss_pred EEEEEeecccceEEEEEeCCC
Q 007620 313 LVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 313 l~~~~~~~~~~~~L~~~d~~~ 333 (595)
++... ....|+++|+++
T Consensus 239 ~v~~~----~~~~i~~~d~~g 255 (299)
T 2z2n_A 239 WFTEW----GANKIGRLTSNN 255 (299)
T ss_dssp EEEET----TTTEEEEEETTT
T ss_pred EEecc----CCceEEEECCCC
Confidence 55431 223788899843
No 280
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.27 E-value=2.3 Score=41.12 Aligned_cols=127 Identities=14% Similarity=0.009 Sum_probs=63.3
Q ss_pred eeeeEECC-CCCeEEEEEcccCcccc-----ccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCCCCceee
Q 007620 177 YTAVEPSP-DQKYVLITSMHRPYSYK-----VPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWR 250 (595)
Q Consensus 177 ~~~~~~Sp-Dg~~l~~~~~~~~~~~~-----~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ws 250 (595)
...+.+.| +|+ |+++.....+... +........|+++|..+++.+.+...- ..+..+.++
T Consensus 128 p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-------------~~p~gia~~ 193 (322)
T 2fp8_A 128 LYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL-------------HVPGGAEVS 193 (322)
T ss_dssp EEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE-------------SCCCEEEEC
T ss_pred cceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCC-------------ccCcceEEC
Confidence 34788999 884 6666432110000 000001247999998877665442110 112357889
Q ss_pred cCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCC---CceeccccCccccceeecCCCcEEEEEEeec------c
Q 007620 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE---KPEILHKLDLRFRSVSWCDDSLALVNETWYK------T 321 (595)
Q Consensus 251 pdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~---~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~------~ 321 (595)
+||+ .||+... ....+++++. ++. ..+.+....+ ...+...++|..++...... .
T Consensus 194 ~dg~-~lyv~d~-----------~~~~I~~~~~---~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~ 257 (322)
T 2fp8_A 194 ADSS-FVLVAEF-----------LSHQIVKYWL---EGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGR 257 (322)
T ss_dssp TTSS-EEEEEEG-----------GGTEEEEEES---SSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSC
T ss_pred CCCC-EEEEEeC-----------CCCeEEEEEC---CCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCC
Confidence 9987 3554421 1235666665 321 2222222222 44566778887555442200 1
Q ss_pred cceEEEEEeCCC
Q 007620 322 SQTRTWLVCPGS 333 (595)
Q Consensus 322 ~~~~L~~~d~~~ 333 (595)
....|+++|.++
T Consensus 258 ~~~~v~~~d~~G 269 (322)
T 2fp8_A 258 VDPKGIKFDEFG 269 (322)
T ss_dssp EEEEEEEECTTS
T ss_pred CccEEEEECCCC
Confidence 134688888765
No 281
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=95.22 E-value=0.033 Score=52.12 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=45.3
Q ss_pred ceE--EEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCC-CchhHHHhccCeE
Q 007620 481 QKE--MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMT-PTSSLIFLARRFA 557 (595)
Q Consensus 481 ~~e--~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~-~~~~q~la~~GY~ 557 (595)
..| .+.+++.|| +|.++++.|.+ ++. |+||++|+... +++ .+.... ....+.|+.+||.
T Consensus 20 ~~e~~~~~~~~~~g-~l~~~~~~p~~----~~~--p~vv~~HG~~~---------~~~--~~~~~~~~~~~~~l~~~G~~ 81 (249)
T 2i3d_A 20 QGHMPEVIFNGPAG-RLEGRYQPSKE----KSA--PIAIILHPHPQ---------FGG--TMNNQIVYQLFYLFQKRGFT 81 (249)
T ss_dssp ----CEEEEEETTE-EEEEEEECCSS----TTC--CEEEEECCCGG---------GTC--CTTSHHHHHHHHHHHHTTCE
T ss_pred cCceeEEEEECCCc-eEEEEEEcCCC----CCC--CEEEEECCCcc---------cCC--CccchHHHHHHHHHHHCCCE
Confidence 556 999999999 99999998864 223 88898774210 001 111111 1235789999999
Q ss_pred EEeCCCCceeecC
Q 007620 558 VLAGPSIPIIGEG 570 (595)
Q Consensus 558 Vl~~~~~~~~~~~ 570 (595)
|+. ++.+..|..
T Consensus 82 v~~-~d~~g~G~s 93 (249)
T 2i3d_A 82 TLR-FNFRSIGRS 93 (249)
T ss_dssp EEE-ECCTTSTTC
T ss_pred EEE-ECCCCCCCC
Confidence 999 887776643
No 282
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=95.18 E-value=0.0058 Score=58.66 Aligned_cols=39 Identities=15% Similarity=0.148 Sum_probs=34.3
Q ss_pred ceEEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEEecc
Q 007620 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYP 521 (595)
Q Consensus 481 ~~e~v~~~~~-DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~ 521 (595)
..+.+++++. +|.++..+|++|++|+++++| |+|++.|+
T Consensus 17 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~--Pvl~~lhG 56 (275)
T 2qm0_A 17 NTEQWKMYSKLEGKEYQIHISKPKQPAPDSGY--PVIYVLDG 56 (275)
T ss_dssp TEEEEEEECTTTCCEEEEEEECCSSCCCTTCE--EEEEEESH
T ss_pred CceEEEEEecCCCCEEEEEEECCCCCCCCCCc--cEEEEecC
Confidence 7889999987 799999999999999877766 99999764
No 283
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=95.14 E-value=0.032 Score=54.29 Aligned_cols=68 Identities=16% Similarity=0.280 Sum_probs=44.7
Q ss_pred CceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhcc-CeEE
Q 007620 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAV 558 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~-GY~V 558 (595)
...+.+++++.|| +|.+++|.|.+.. + +.|+||++|++.+ ..|.... +....+.|+++ ||.|
T Consensus 46 ~~~~~~~i~~~~g-~l~~~~~~P~~~~--~--~~p~vv~~HGGg~--------~~g~~~~----~~~~~~~la~~~g~~v 108 (310)
T 2hm7_A 46 AEVREFDMDLPGR-TLKVRMYRPEGVE--P--PYPALVYYHGGSW--------VVGDLET----HDPVCRVLAKDGRAVV 108 (310)
T ss_dssp SEEEEEEEEETTE-EEEEEEEECTTCC--S--SEEEEEEECCSTT--------TSCCTTT----THHHHHHHHHHHTSEE
T ss_pred ceEEEEEeccCCC-eEEEEEEecCCCC--C--CCCEEEEECCCcc--------ccCChhH----hHHHHHHHHHhcCCEE
Confidence 3788899999888 9999999998642 2 3499999875311 1111111 11234677876 9999
Q ss_pred EeCCCCc
Q 007620 559 LAGPSIP 565 (595)
Q Consensus 559 l~~~~~~ 565 (595)
+. ++.+
T Consensus 109 ~~-~d~r 114 (310)
T 2hm7_A 109 FS-VDYR 114 (310)
T ss_dssp EE-ECCC
T ss_pred EE-eCCC
Confidence 98 5443
No 284
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=95.09 E-value=0.019 Score=52.26 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=45.8
Q ss_pred CceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
+..+.++++. ||.+|.++++.|.+ +. |+||++|+.. +....+. .....+.|+++||.|+
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~~-----~~--p~vv~~hG~~-----------~~~~~~~--~~~~~~~l~~~G~~v~ 68 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPNG-----AT--GIVLFAHGSG-----------SSRYSPR--NRYVAEVLQQAGLATL 68 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCTT-----CC--EEEEEECCTT-----------CCTTCHH--HHHHHHHHHHHTCEEE
T ss_pred ceeeEEEEec-CCeEEEEEEecCCC-----Cc--eEEEEecCCC-----------CCCCccc--hHHHHHHHHHCCCEEE
Confidence 3678889986 99999999999975 23 8999876420 1111110 0123578999999999
Q ss_pred eCCCCceee
Q 007620 560 AGPSIPIIG 568 (595)
Q Consensus 560 ~~~~~~~~~ 568 (595)
. ++.+..|
T Consensus 69 ~-~d~~g~g 76 (223)
T 2o2g_A 69 L-IDLLTQE 76 (223)
T ss_dssp E-ECSSCHH
T ss_pred E-EcCCCcC
Confidence 9 7777655
No 285
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=95.01 E-value=0.013 Score=56.94 Aligned_cols=66 Identities=18% Similarity=0.232 Sum_probs=43.1
Q ss_pred ceEEEEEE---CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeE
Q 007620 481 QKEMIKYQ---RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (595)
Q Consensus 481 ~~e~v~~~---~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~ 557 (595)
....++|+ ..+|.+|+++++.|.++++ +.|+||++|+. ......+.....++++++||+
T Consensus 23 g~~~~~~~~~~~~~~~~l~~~~~~P~~~~~----~~p~vv~lHG~--------------~~~~~~~~~~~~~~l~~~g~~ 84 (304)
T 3d0k_A 23 GRNAIPYLDDDRNADRPFTLNTYRPYGYTP----DRPVVVVQHGV--------------LRNGADYRDFWIPAADRHKLL 84 (304)
T ss_dssp EEEEEEECC---CTTCCEEEEEEECTTCCT----TSCEEEEECCT--------------TCCHHHHHHHTHHHHHHHTCE
T ss_pred CCceEEecccCCCCCceEEEEEEeCCCCCC----CCcEEEEeCCC--------------CCCHHHHHHHHHHHHHHCCcE
Confidence 34457777 7899999999999987643 23999997743 211010101224788899999
Q ss_pred EEeCCCCc
Q 007620 558 VLAGPSIP 565 (595)
Q Consensus 558 Vl~~~~~~ 565 (595)
|+. |+.+
T Consensus 85 v~~-~d~~ 91 (304)
T 3d0k_A 85 IVA-PTFS 91 (304)
T ss_dssp EEE-EECC
T ss_pred EEE-eCCc
Confidence 998 5554
No 286
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=94.98 E-value=0.073 Score=53.28 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=39.8
Q ss_pred CceEEEEEECCCCcEEEEEEEc-CCCCC------------------CCCCCCCcEEEEeccCCccCcccCCcccCCCCcc
Q 007620 480 LQKEMIKYQRKDGVPLTATLYL-PPGYD------------------QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF 540 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~-P~~~~------------------~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~ 540 (595)
...+.+++.+.|| +...+|+ |.+.. +....++|+||++|++.+ +.|....
T Consensus 62 v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~--------~~g~~~~- 130 (365)
T 3ebl_A 62 VSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSF--------VHSSASS- 130 (365)
T ss_dssp EEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTT--------TSCCTTB-
T ss_pred CceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCcc--------ccCCCch-
Confidence 3778899999999 7777887 87631 011235699999875421 1111110
Q ss_pred cCCCCchhHHHhcc-CeEEEe
Q 007620 541 SGMTPTSSLIFLAR-RFAVLA 560 (595)
Q Consensus 541 ~~~~~~~~q~la~~-GY~Vl~ 560 (595)
..+....+.||++ ||+|+.
T Consensus 131 -~~~~~~~~~la~~~g~~Vv~ 150 (365)
T 3ebl_A 131 -TIYDSLCRRFVKLSKGVVVS 150 (365)
T ss_dssp -HHHHHHHHHHHHHHTSEEEE
T ss_pred -hhHHHHHHHHHHHCCCEEEE
Confidence 0001124678876 999998
No 287
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=94.97 E-value=0.018 Score=58.89 Aligned_cols=68 Identities=21% Similarity=0.183 Sum_probs=46.9
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
..+.+.++. +|.+|.++++.|.+ . + +.|+||++|+. ++.. ........+.|+++||+|+.
T Consensus 167 ~~~~v~i~~-~g~~l~~~~~~P~~-~--~--~~P~vv~~hG~------------~~~~--~~~~~~~~~~l~~~G~~V~~ 226 (415)
T 3mve_A 167 IIKQLEIPF-EKGKITAHLHLTNT-D--K--PHPVVIVSAGL------------DSLQ--TDMWRLFRDHLAKHDIAMLT 226 (415)
T ss_dssp EEEEEEEEC-SSSEEEEEEEESCS-S--S--CEEEEEEECCT------------TSCG--GGGHHHHHHTTGGGTCEEEE
T ss_pred CeEEEEEEE-CCEEEEEEEEecCC-C--C--CCCEEEEECCC------------CccH--HHHHHHHHHHHHhCCCEEEE
Confidence 577788876 89999999999986 2 2 34999997642 1110 11111224688899999999
Q ss_pred CCCCceeec
Q 007620 561 GPSIPIIGE 569 (595)
Q Consensus 561 ~~~~~~~~~ 569 (595)
++.|..|.
T Consensus 227 -~D~~G~G~ 234 (415)
T 3mve_A 227 -VDMPSVGY 234 (415)
T ss_dssp -ECCTTSGG
T ss_pred -ECCCCCCC
Confidence 88887665
No 288
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=94.91 E-value=0.021 Score=54.67 Aligned_cols=65 Identities=9% Similarity=-0.032 Sum_probs=46.2
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
..+.+.++. ||.+|.++++.|. +. |+||++|+. +.. ...+....+.|+.+||.|+.
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~~p~------~~--p~vv~~HG~--------------~~~-~~~~~~~~~~l~~~g~~v~~ 60 (290)
T 3ksr_A 5 KLSSIEIPV-GQDELSGTLLTPT------GM--PGVLFVHGW--------------GGS-QHHSLVRAREAVGLGCICMT 60 (290)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEEE------SE--EEEEEECCT--------------TCC-TTTTHHHHHHHHTTTCEEEC
T ss_pred ceeeEEecC-CCeEEEEEEecCC------CC--cEEEEeCCC--------------CCC-cCcHHHHHHHHHHCCCEEEE
Confidence 467788886 8999999999997 22 999997742 111 11111235789999999999
Q ss_pred CCCCceeecC
Q 007620 561 GPSIPIIGEG 570 (595)
Q Consensus 561 ~~~~~~~~~~ 570 (595)
++.+..|..
T Consensus 61 -~d~~G~g~s 69 (290)
T 3ksr_A 61 -FDLRGHEGY 69 (290)
T ss_dssp -CCCTTSGGG
T ss_pred -eecCCCCCC
Confidence 888876653
No 289
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=94.89 E-value=0.036 Score=52.71 Aligned_cols=69 Identities=10% Similarity=0.126 Sum_probs=42.6
Q ss_pred eEEEEEECCCCcEEEEEEEcCCC---CCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEE
Q 007620 482 KEMIKYQRKDGVPLTATLYLPPG---YDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (595)
Q Consensus 482 ~e~v~~~~~DG~~i~g~l~~P~~---~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~V 558 (595)
.+.+++ ..+|.++...+++|.+ +.+.+ +.|+||++|++-+. .+... .+....+.|+++||.|
T Consensus 4 ~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~--~~p~vv~~HGgg~~--------~~~~~----~~~~~~~~l~~~G~~v 68 (277)
T 3bxp_A 4 VEQRTL-NTAAHPFQITAYWLDQISDFETAV--DYPIMIICPGGGFT--------YHSGR----EEAPIATRMMAAGMHT 68 (277)
T ss_dssp EEEEEE-CSTTCCEEEEEEEECCCCSSSCCC--CEEEEEEECCSTTT--------SCCCT----THHHHHHHHHHTTCEE
T ss_pred eEEEEe-ccCCCcceEEEEeCCcccccccCC--CccEEEEECCCccc--------cCCCc----cchHHHHHHHHCCCEE
Confidence 456677 4688999999999983 23333 44999998753110 01100 1112346889999999
Q ss_pred EeCCCCce
Q 007620 559 LAGPSIPI 566 (595)
Q Consensus 559 l~~~~~~~ 566 (595)
+. ++.+.
T Consensus 69 ~~-~d~~g 75 (277)
T 3bxp_A 69 VV-LNYQL 75 (277)
T ss_dssp EE-EECCC
T ss_pred EE-Eeccc
Confidence 99 55444
No 290
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=94.74 E-value=1.4 Score=43.31 Aligned_cols=39 Identities=13% Similarity=0.073 Sum_probs=25.0
Q ss_pred cceEEEEcC-CCCe-eecCCC-C-eeeeeEECCCCCeEEEEEc
Q 007620 156 TAQLVLGSL-DGTA-KDFGTP-A-VYTAVEPSPDQKYVLITSM 194 (595)
Q Consensus 156 ~~~l~~~d~-~g~~-~~lt~~-~-~~~~~~~SpDg~~l~~~~~ 194 (595)
...|.+.|+ +|+. ..|... . ....++|||||++|+-.+.
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 346778888 6654 345422 2 2335799999999886653
No 291
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=94.68 E-value=0.042 Score=51.64 Aligned_cols=71 Identities=13% Similarity=0.220 Sum_probs=40.7
Q ss_pred ceEEEEEECC-CCcEEEEEEEcCCCCC----CCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccC
Q 007620 481 QKEMIKYQRK-DGVPLTATLYLPPGYD----QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR 555 (595)
Q Consensus 481 ~~e~v~~~~~-DG~~i~g~l~~P~~~~----~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~G 555 (595)
..+.+++.+. +|.++.++|++|.+++ +.+ +.|+||++|+.. +....|... .....+++..|
T Consensus 6 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~--~~p~vv~~HG~~-----------~~~~~~~~~-~~~~~~~~~~~ 71 (263)
T 2uz0_A 6 AVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECE--DIPVLYLLHGMS-----------GNHNSWLKR-TNVERLLRGTN 71 (263)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECC---------C--CBCEEEEECCTT-----------CCTTHHHHH-SCHHHHTTTCC
T ss_pred eEeEEEEechhhCCceeEEEEeCCCccccCCcCC--CCCEEEEECCCC-----------CCHHHHHhc-cCHHHHHhcCC
Confidence 4566777654 7899999999999873 233 449999987531 111112110 01123555679
Q ss_pred eEEEeCCCCce
Q 007620 556 FAVLAGPSIPI 566 (595)
Q Consensus 556 Y~Vl~~~~~~~ 566 (595)
|+|+. |+...
T Consensus 72 ~~v~~-~~~~~ 81 (263)
T 2uz0_A 72 LIVVM-PNTSN 81 (263)
T ss_dssp CEEEE-CCCTT
T ss_pred eEEEE-ECCCC
Confidence 99997 65543
No 292
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.65 E-value=2.9 Score=39.23 Aligned_cols=130 Identities=15% Similarity=0.115 Sum_probs=65.4
Q ss_pred eEEEEcCCCCeeec--CC-CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCC
Q 007620 158 QLVLGSLDGTAKDF--GT-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP 234 (595)
Q Consensus 158 ~l~~~d~~g~~~~l--t~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~ 234 (595)
.|++++.+|+...+ .. ......+.+.++|+ |+++... ...|+++|.++. ...+.. +...
T Consensus 126 ~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~------------~~~i~~~~~~g~-~~~~~~-~~~~--- 187 (300)
T 2qc5_A 126 RIGKLTADGTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQ------------NNSIGRITNTGK-LEEYPL-PTNA--- 187 (300)
T ss_dssp EEEEECTTSCEEEEECSSTTCCEEEEEECTTSS-EEEEETT------------TTEEEEECTTCC-EEEEEC-SSTT---
T ss_pred eEEEECCCCCEEEccCCCCCCCceeEEECCCCC-EEEEecC------------CCeEEEECCCCc-EEEeeC-CCCC---
Confidence 45666665544332 21 12345788999998 6665432 236888888443 333321 1000
Q ss_pred ccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceecc--ccCccccceeecCCCcE
Q 007620 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLA 312 (595)
Q Consensus 235 ~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~--~~~~~~~~~~wspDg~~ 312 (595)
.....+...++|. |++.. .....+++++. + ++...+. ........+.++++|..
T Consensus 188 -------~~~~~i~~d~~g~--l~v~~-----------~~~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~l 243 (300)
T 2qc5_A 188 -------AAPVGITSGNDGA--LWFVE-----------IMGNKIGRITT---T-GEISEYDIPTPNARPHAITAGKNSEI 243 (300)
T ss_dssp -------CCEEEEEECTTSS--EEEEE-----------TTTTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTCE
T ss_pred -------CCcceEEECCCCC--EEEEc-----------cCCCEEEEEcC---C-CcEEEEECCCCCCCceEEEECCCCCE
Confidence 1122455566664 54431 11234666663 3 2433321 11223456778888875
Q ss_pred EEEEEeecccceEEEEEeCCC
Q 007620 313 LVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 313 l~~~~~~~~~~~~L~~~d~~~ 333 (595)
++... ....|+++++++
T Consensus 244 ~v~~~----~~~~i~~~~~~g 260 (300)
T 2qc5_A 244 WFTEW----GANQIGRITNDN 260 (300)
T ss_dssp EEEET----TTTEEEEECTTS
T ss_pred EEecc----CCCeEEEECCCC
Confidence 55431 224788999843
No 293
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=94.55 E-value=0.041 Score=55.34 Aligned_cols=76 Identities=12% Similarity=0.179 Sum_probs=47.3
Q ss_pred ceEEEEEECCC--C--cEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccC-CCCchhHHHh-cc
Q 007620 481 QKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG-MTPTSSLIFL-AR 554 (595)
Q Consensus 481 ~~e~v~~~~~D--G--~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~-~~~~~~q~la-~~ 554 (595)
+...|.|++.| | ..+.|+|++|.+. + .+.|+|++.|+... .. ...|. +.. ..+...+.|| ++
T Consensus 42 ~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~-~---~~~PvV~~~HG~~~-----~~--~~~ps-~~~~~~~~~~~~lal~~ 109 (377)
T 4ezi_A 42 QLYKINYKTQSPDGNLTIASGLVAMPIHP-V---GQVGIISYQHGTRF-----ER--NDVPS-RNNEKNYIYLAAYGNSA 109 (377)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEESSC-S---SCEEEEEEECCCCC-----ST--TCSGG-GCCGGGHHHHHHHTTTT
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEECCCC-C---CCCcEEEEeCCCcC-----Cc--ccCCC-cCcccchHHHHHHHHhC
Confidence 56667776665 5 4688999999874 1 24599999886421 00 11121 110 0112346788 99
Q ss_pred CeEEEeCCCCceeec
Q 007620 555 RFAVLAGPSIPIIGE 569 (595)
Q Consensus 555 GY~Vl~~~~~~~~~~ 569 (595)
||+|+. +|.+..|.
T Consensus 110 Gy~Vv~-~D~rG~G~ 123 (377)
T 4ezi_A 110 GYMTVM-PDYLGLGD 123 (377)
T ss_dssp CCEEEE-ECCTTSTT
T ss_pred CcEEEE-eCCCCCCC
Confidence 999999 77777664
No 294
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=94.50 E-value=0.1 Score=51.21 Aligned_cols=67 Identities=13% Similarity=0.161 Sum_probs=43.4
Q ss_pred CceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhcc-CeEE
Q 007620 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAV 558 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~-GY~V 558 (595)
...+.+++.+.+| +|.+++|.|.+ . + +.|+||++|++-| +.|.... +......||.+ ||.|
T Consensus 63 ~~~~~~~i~~~~~-~i~~~iy~P~~-~--~--~~p~vv~~HGGg~--------~~g~~~~----~~~~~~~La~~~g~~V 124 (323)
T 3ain_A 63 GKIEDITIPGSET-NIKARVYYPKT-Q--G--PYGVLVYYHGGGF--------VLGDIES----YDPLCRAITNSCQCVT 124 (323)
T ss_dssp SEEEEEEEECSSS-EEEEEEEECSS-C--S--CCCEEEEECCSTT--------TSCCTTT----THHHHHHHHHHHTSEE
T ss_pred cEEEEEEecCCCC-eEEEEEEecCC-C--C--CCcEEEEECCCcc--------ccCChHH----HHHHHHHHHHhcCCEE
Confidence 4788899998888 89999999986 2 2 3499999875311 1111111 11224577764 9999
Q ss_pred EeCCCCc
Q 007620 559 LAGPSIP 565 (595)
Q Consensus 559 l~~~~~~ 565 (595)
+. ++.+
T Consensus 125 v~-~Dyr 130 (323)
T 3ain_A 125 IS-VDYR 130 (323)
T ss_dssp EE-ECCC
T ss_pred EE-ecCC
Confidence 98 4443
No 295
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=94.47 E-value=0.082 Score=51.37 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=42.6
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhcc-CeEEE
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~-GY~Vl 559 (595)
..+.+++++.|| +|.++++.|.+- + +.|+||++|++.+ +.|....| ......|+++ ||.|+
T Consensus 50 ~~~~~~i~~~~g-~~~~~~~~P~~~---~--~~p~vv~~HGgg~--------~~g~~~~~----~~~~~~la~~~g~~v~ 111 (313)
T 2wir_A 50 RVEDITIPGRGG-PIRARVYRPRDG---E--RLPAVVYYHGGGF--------VLGSVETH----DHVCRRLANLSGAVVV 111 (313)
T ss_dssp EEEEEEEEETTE-EEEEEEEECSCC---S--SEEEEEEECCSTT--------TSCCTGGG----HHHHHHHHHHHCCEEE
T ss_pred eEEEEEeeCCCC-cEEEEEEecCCC---C--CccEEEEECCCcc--------cCCChHHH----HHHHHHHHHHcCCEEE
Confidence 678899999898 999999999752 2 3499999875311 11111111 1224577774 99999
Q ss_pred eCCCC
Q 007620 560 AGPSI 564 (595)
Q Consensus 560 ~~~~~ 564 (595)
. ++.
T Consensus 112 ~-~d~ 115 (313)
T 2wir_A 112 S-VDY 115 (313)
T ss_dssp E-EEC
T ss_pred E-eec
Confidence 8 443
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.40 E-value=2.1 Score=43.58 Aligned_cols=56 Identities=9% Similarity=-0.004 Sum_probs=38.4
Q ss_pred ccceEEccC--CCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007620 33 INFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 33 ~~~~~~SPD--G~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
...+.|+|+ +..|++ +.. . ..|+++++++|+...+..... ....+.|+++|+ |+++
T Consensus 141 P~gvavd~~s~~g~Lyv-~D~--------~-~~I~~id~~~g~v~~~~~~~~-----~P~giavd~dG~-lyVa 198 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYW-VGQ--------R-DAFRHVDFVNQYVDIKTTNIG-----QCADVNFTLNGD-MVVV 198 (433)
T ss_dssp CCEEEECTTTTTCEEEE-ECB--------T-SCEEEEETTTTEEEEECCCCS-----CEEEEEECTTCC-EEEE
T ss_pred CceEEEccccCCCEEEE-EeC--------C-CCEEEEECCCCEEEEeecCCC-----CccEEEECCCCC-EEEE
Confidence 456789995 455554 432 2 789999998888776643221 245789999999 6665
No 297
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=94.26 E-value=0.07 Score=53.27 Aligned_cols=66 Identities=15% Similarity=0.153 Sum_probs=43.6
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
..+.+++++.||..|.+++|.|.+.. + +.|+||++|++.| +.|.... ..+....+.|+++||+|+.
T Consensus 81 ~~~~~~~~~~~g~~l~~~v~~p~~~~--~--~~p~vv~iHGgg~--------~~g~~~~--~~~~~~~~~la~~g~~vv~ 146 (361)
T 1jkm_A 81 ETSTETILGVDGNEITLHVFRPAGVE--G--VLPGLVYTHGGGM--------TILTTDN--RVHRRWCTDLAAAGSVVVM 146 (361)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTCC--S--CEEEEEEECCSTT--------TSSCSSS--HHHHHHHHHHHHTTCEEEE
T ss_pred eeeeeeeecCCCCeEEEEEEeCCCCC--C--CCeEEEEEcCCcc--------ccCCCcc--cchhHHHHHHHhCCCEEEE
Confidence 56778889999999999999998632 2 4599999875421 1111110 0001124688889999998
No 298
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=94.22 E-value=0.15 Score=50.43 Aligned_cols=77 Identities=13% Similarity=0.008 Sum_probs=48.3
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCC--CCchhHHHhccCeEE
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGM--TPTSSLIFLARRFAV 558 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~--~~~~~q~la~~GY~V 558 (595)
..+.+.++..||..|..+.+.|....+....+-|+||++|+.. ++...|... .....+.|+++||.|
T Consensus 26 ~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~-----------~~~~~~~~~~~~~~~a~~l~~~G~~v 94 (377)
T 1k8q_A 26 PAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLL-----------ASATNWISNLPNNSLAFILADAGYDV 94 (377)
T ss_dssp CCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTT-----------CCGGGGSSSCTTTCHHHHHHHTTCEE
T ss_pred CceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCC-----------CchhhhhcCCCcccHHHHHHHCCCCE
Confidence 6788889999999999999977542100001228888876421 111122211 112345899999999
Q ss_pred EeCCCCceeec
Q 007620 559 LAGPSIPIIGE 569 (595)
Q Consensus 559 l~~~~~~~~~~ 569 (595)
+. ++.|..|.
T Consensus 95 i~-~D~~G~G~ 104 (377)
T 1k8q_A 95 WL-GNSRGNTW 104 (377)
T ss_dssp EE-CCCTTSTT
T ss_pred EE-ecCCCCCC
Confidence 99 88887664
No 299
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.17 E-value=2.1 Score=44.23 Aligned_cols=62 Identities=10% Similarity=0.145 Sum_probs=40.8
Q ss_pred ccceEEcc-CCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEE-------ecCCcEEEEE
Q 007620 33 INFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW-------VNNSTLLIFT 104 (595)
Q Consensus 33 ~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~W-------spdg~~l~~~ 104 (595)
....+++| ++..|+++. + ....|+++|++++....+.......++ ....+.| +++|+.|++.
T Consensus 141 p~~la~dp~~~~~Lyv~~-~--------~~~~i~~ID~~~~~v~~l~~~~~~~~~-~p~~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICY-D--------GHKAIQLIDLKNRMLSSPLNINTIPTN-RIRSIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp EEEEEEETTEEEEEEEEE-E--------TEEEEEEEETTTTEEEEEECCTTSSCS-BEEEEEECCCBTTTBCTTCEEEEE
T ss_pred CCEEEEccCCCCEEEEEE-C--------CCCeEEEEECCCCEEEEEEccCccccC-CCcEEEEeecccccCCCCCEEEEE
Confidence 44668999 466655543 2 246799999999888776543221111 1346789 9999988776
No 300
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=94.13 E-value=0.079 Score=58.58 Aligned_cols=28 Identities=18% Similarity=0.307 Sum_probs=22.4
Q ss_pred ECCCCcE--EEEEEEcCCCCCCCCCCCCcEEEEec
Q 007620 488 QRKDGVP--LTATLYLPPGYDQSKDGPLPCLFWAY 520 (595)
Q Consensus 488 ~~~DG~~--i~g~l~~P~~~~~~k~y~lP~vv~~y 520 (595)
+.+||.+ |.++||+|.+. + ++|+||..|
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~---~--k~PvIv~~~ 208 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKST---E--KLPVVMTAS 208 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCS---S--CEEEEEEEC
T ss_pred cCCCCCeeeEEEEEEecCCC---C--cccEEEecC
Confidence 5789999 99999999862 3 449999654
No 301
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=93.81 E-value=0.048 Score=51.01 Aligned_cols=66 Identities=15% Similarity=0.068 Sum_probs=42.9
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcc-cCCCCchhHHHhccCeEEEeCC
Q 007620 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF-SGMTPTSSLIFLARRFAVLAGP 562 (595)
Q Consensus 484 ~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~-~~~~~~~~q~la~~GY~Vl~~~ 562 (595)
.++++ .||.+|+++++.|.+.. ++. |+||++|+- +... ...+....+.|+++||.|+. +
T Consensus 3 ~~~~~-~~g~~l~~~~~~p~~~~--~~~--p~vvl~HG~--------------~~~~~~~~~~~~~~~l~~~g~~vi~-~ 62 (251)
T 2wtm_A 3 AMYID-CDGIKLNAYLDMPKNNP--EKC--PLCIIIHGF--------------TGHSEERHIVAVQETLNEIGVATLR-A 62 (251)
T ss_dssp EEEEE-ETTEEEEEEEECCTTCC--SSE--EEEEEECCT--------------TCCTTSHHHHHHHHHHHHTTCEEEE-E
T ss_pred ceEEe-cCCcEEEEEEEccCCCC--CCC--CEEEEEcCC--------------CcccccccHHHHHHHHHHCCCEEEE-e
Confidence 35665 59999999999997632 223 888887642 1110 00011224688999999999 8
Q ss_pred CCceeec
Q 007620 563 SIPIIGE 569 (595)
Q Consensus 563 ~~~~~~~ 569 (595)
|.|..|.
T Consensus 63 D~~G~G~ 69 (251)
T 2wtm_A 63 DMYGHGK 69 (251)
T ss_dssp CCTTSTT
T ss_pred cCCCCCC
Confidence 8887764
No 302
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.79 E-value=2.4 Score=39.64 Aligned_cols=77 Identities=9% Similarity=-0.102 Sum_probs=45.9
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceE-ecccCCCc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK-PLFESPDI 83 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~-~lt~~~~~ 83 (595)
+.|...|++ +|+..+-..++.. ...--.+++|++|+.+. .....++++|+++.+.. ++....
T Consensus 65 S~v~~vD~~----Tgkv~~~~~l~~~--~FgeGit~~g~~ly~lt---------w~~~~v~v~D~~t~~~~~ti~~~~-- 127 (262)
T 3nol_A 65 SSIRKVDIE----SGKTLQQIELGKR--YFGEGISDWKDKIVGLT---------WKNGLGFVWNIRNLRQVRSFNYDG-- 127 (262)
T ss_dssp EEEEEECTT----TCCEEEEEECCTT--CCEEEEEEETTEEEEEE---------SSSSEEEEEETTTCCEEEEEECSS--
T ss_pred ceEEEEECC----CCcEEEEEecCCc--cceeEEEEeCCEEEEEE---------eeCCEEEEEECccCcEEEEEECCC--
Confidence 346666777 6766544434432 33444677899886654 23578999999987743 332211
Q ss_pred cccccccceEEecCCcEEEEE
Q 007620 84 CLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~ 104 (595)
.....++|++.|+.+
T Consensus 128 ------eG~glt~dg~~L~~S 142 (262)
T 3nol_A 128 ------EGWGLTHNDQYLIMS 142 (262)
T ss_dssp ------CCCCEEECSSCEEEC
T ss_pred ------CceEEecCCCEEEEE
Confidence 123444677766553
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.76 E-value=8.5 Score=41.13 Aligned_cols=61 Identities=7% Similarity=-0.020 Sum_probs=41.8
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
......+.|.+.+|+|+-- .....|++.++++...+.+....-. ....+..+++++.|++.
T Consensus 128 ~P~~Iavdp~~g~ly~tD~--------g~~~~I~r~~~dG~~~~~l~~~~~~----~P~Glald~~~~~LY~a 188 (619)
T 3s94_A 128 QPRAIALDPSSGFMYWTDW--------GEVPKIERAGMDGSSRFIIINSEIY----WPNGLTLDYEEQKLYWA 188 (619)
T ss_dssp CCCCEEEETTTTEEEEEEC--------SSSCEEEEEETTSCSCEEEECSSCS----SEEEEEEETTTTEEEEE
T ss_pred CCceEEEecCCCeEEEecc--------CCCCEEEEEECCCCceEEEEeCCCC----CCcEEEEEccCCEEEEE
Confidence 4667899998888877632 1246899999987665555322110 23578888988888886
No 304
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=93.70 E-value=0.14 Score=47.78 Aligned_cols=66 Identities=14% Similarity=0.133 Sum_probs=41.9
Q ss_pred eEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeC
Q 007620 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (595)
Q Consensus 482 ~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~ 561 (595)
.+.+++++.||.+|.++++.|.+ . + +.|+||++|+..+. .+. ...+.....++|+.+ |.|+.
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~-~--~--~~~~vv~~HG~~~~--------~~~---~~~~~~~~~~~l~~~-~~v~~- 64 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKN-Q--P--TKGVIVYIHGGGLM--------FGK---ANDLSPQYIDILTEH-YDLIQ- 64 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSS-S--S--CSEEEEEECCSTTT--------SCC---TTCSCHHHHHHHTTT-EEEEE-
T ss_pred ceEEEEecCCcEEEEEEEEccCC-C--C--CCCEEEEEECCccc--------CCc---hhhhHHHHHHHHHhC-ceEEe-
Confidence 35677889999999999999974 1 1 33999997753110 011 111111234677777 99999
Q ss_pred CCCc
Q 007620 562 PSIP 565 (595)
Q Consensus 562 ~~~~ 565 (595)
++.+
T Consensus 65 ~d~~ 68 (275)
T 3h04_A 65 LSYR 68 (275)
T ss_dssp ECCC
T ss_pred eccc
Confidence 6665
No 305
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=93.66 E-value=0.087 Score=51.52 Aligned_cols=70 Identities=16% Similarity=0.246 Sum_probs=45.1
Q ss_pred CceEEEEEECCCCc-EEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhc-cCeE
Q 007620 480 LQKEMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFA 557 (595)
Q Consensus 480 ~~~e~v~~~~~DG~-~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~-~GY~ 557 (595)
+..+.+++++.||. +|.++++.|.+-. + +.|+||++|++.+ +.|....+ ......|++ .||.
T Consensus 49 ~~~~~~~i~~~~g~~~l~~~~~~P~~~~--~--~~p~vv~~HGgg~--------~~g~~~~~----~~~~~~la~~~G~~ 112 (323)
T 1lzl_A 49 VSLRELSAPGLDGDPEVKIRFVTPDNTA--G--PVPVLLWIHGGGF--------AIGTAESS----DPFCVEVARELGFA 112 (323)
T ss_dssp EEEEEEEECCSTTCCCEEEEEEEESSCC--S--CEEEEEEECCSTT--------TSCCGGGG----HHHHHHHHHHHCCE
T ss_pred ceEEEEEecCCCCCceeEEEEEecCCCC--C--CCcEEEEECCCcc--------ccCChhhh----HHHHHHHHHhcCcE
Confidence 37788999999997 8999999997522 2 3499999875311 11111111 122456776 5999
Q ss_pred EEeCCCCce
Q 007620 558 VLAGPSIPI 566 (595)
Q Consensus 558 Vl~~~~~~~ 566 (595)
|+. ++.+.
T Consensus 113 Vv~-~d~rg 120 (323)
T 1lzl_A 113 VAN-VEYRL 120 (323)
T ss_dssp EEE-ECCCC
T ss_pred EEE-ecCCC
Confidence 999 55443
No 306
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=93.65 E-value=0.1 Score=50.65 Aligned_cols=69 Identities=10% Similarity=-0.061 Sum_probs=43.8
Q ss_pred eEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeC
Q 007620 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (595)
Q Consensus 482 ~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~ 561 (595)
.+...++..||.+|+++.+.|.+-.+ ++. |+||++|+- ..... .+....+.|+++||.|+.
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~~~-~~~--~~VvllHG~--------------g~~~~-~~~~~~~~L~~~G~~Vi~- 67 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKENVP-FKN--NTILIASGF--------------ARRMD-HFAGLAEYLSTNGFHVFR- 67 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSC-CCS--CEEEEECTT--------------CGGGG-GGHHHHHHHHTTTCCEEE-
T ss_pred ceEEEEEcCCCCEEEEEEecCcccCC-CCC--CEEEEecCC--------------ccCch-HHHHHHHHHHHCCCEEEE-
Confidence 55667788899999999998864211 122 778876631 11000 111235689999999999
Q ss_pred CCCcee-ec
Q 007620 562 PSIPII-GE 569 (595)
Q Consensus 562 ~~~~~~-~~ 569 (595)
+|.+.. |.
T Consensus 68 ~D~rGh~G~ 76 (305)
T 1tht_A 68 YDSLHHVGL 76 (305)
T ss_dssp ECCCBCC--
T ss_pred eeCCCCCCC
Confidence 888864 64
No 307
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=93.60 E-value=0.021 Score=54.62 Aligned_cols=70 Identities=13% Similarity=0.135 Sum_probs=43.1
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCC---CCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeE
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGY---DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~---~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~ 557 (595)
+.+.|.|+..||..+...+| |++. .+++ +.|+||++|++.+. ++. ...+....+.|+++||.
T Consensus 18 ~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~--~~p~vv~lHGgg~~---------~~~---~~~~~~~~~~l~~~G~~ 82 (283)
T 3bjr_A 18 QGMQVIKQKLTATCAQLTGY-LHQPDTNAHQT--NLPAIIIVPGGSYT---------HIP---VAQAESLAMAFAGHGYQ 82 (283)
T ss_dssp CSSEEEEEECTTSSCEEEEE-EC--------C--CEEEEEEECCSTTT---------CCC---HHHHHHHHHHHHTTTCE
T ss_pred CCcceEEeecCCCceeEEEe-cCCccccccCC--CCcEEEEECCCccc---------cCC---ccccHHHHHHHHhCCcE
Confidence 77889999999998999999 7752 1333 34999997743110 000 00011234688999999
Q ss_pred EEeCCCCce
Q 007620 558 VLAGPSIPI 566 (595)
Q Consensus 558 Vl~~~~~~~ 566 (595)
|+. ++.+.
T Consensus 83 v~~-~d~~g 90 (283)
T 3bjr_A 83 AFY-LEYTL 90 (283)
T ss_dssp EEE-EECCC
T ss_pred EEE-EeccC
Confidence 998 54443
No 308
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=93.58 E-value=6.8 Score=39.42 Aligned_cols=54 Identities=17% Similarity=0.194 Sum_probs=33.8
Q ss_pred ceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEE
Q 007620 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 35 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~ 104 (595)
-.++++||+.|+.... ...|.++|+.+++......... ..+..+.| |++.|+..
T Consensus 136 v~~~~~d~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~h~----~~v~~l~~--~~~~l~sg 189 (435)
T 1p22_A 136 VYCLQYDDQKIVSGLR----------DNTIKIWDKNTLECKRILTGHT----GSVLCLQY--DERVIITG 189 (435)
T ss_dssp EEEEECCSSEEEEEES----------SSCEEEEESSSCCEEEEECCCS----SCEEEEEC--CSSEEEEE
T ss_pred EEEEEECCCEEEEEeC----------CCeEEEEeCCCCeEEEEEcCCC----CcEEEEEE--CCCEEEEE
Confidence 3467889998877653 2457777998887655433221 14556666 77766654
No 309
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=93.56 E-value=0.14 Score=49.59 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=43.9
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhcc-CeEEE
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~-GY~Vl 559 (595)
..+.+++++.|| +|.+++++|.+- + +.|+||++|++.+ +.|....| ....+.|+.+ ||.|+
T Consensus 47 ~~~~~~i~~~~g-~i~~~~~~p~~~---~--~~p~vv~~HGgg~--------~~g~~~~~----~~~~~~la~~~g~~v~ 108 (311)
T 2c7b_A 47 ETRDVHIPVSGG-SIRARVYFPKKA---A--GLPAVLYYHGGGF--------VFGSIETH----DHICRRLSRLSDSVVV 108 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESSSC---S--SEEEEEEECCSTT--------TSCCTGGG----HHHHHHHHHHHTCEEE
T ss_pred eEEEEEecCCCC-cEEEEEEecCCC---C--CCcEEEEECCCcc--------cCCChhhh----HHHHHHHHHhcCCEEE
Confidence 788899999898 999999999752 1 2399999875311 11111111 1224577776 99999
Q ss_pred eCCCCce
Q 007620 560 AGPSIPI 566 (595)
Q Consensus 560 ~~~~~~~ 566 (595)
. ++.+.
T Consensus 109 ~-~d~rg 114 (311)
T 2c7b_A 109 S-VDYRL 114 (311)
T ss_dssp E-ECCCC
T ss_pred E-ecCCC
Confidence 8 55543
No 310
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=93.52 E-value=0.12 Score=50.94 Aligned_cols=67 Identities=10% Similarity=0.047 Sum_probs=40.1
Q ss_pred CceEEEEEECCCCcEEEEEEEcCCCC-CCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHh-ccCeE
Q 007620 480 LQKEMIKYQRKDGVPLTATLYLPPGY-DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFA 557 (595)
Q Consensus 480 ~~~e~v~~~~~DG~~i~g~l~~P~~~-~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la-~~GY~ 557 (595)
+..+.+.+.+ |..+.+.+|+|.+. ++++ +.|+||++|++.+ +.+.+... .+....+.|+ ++||+
T Consensus 53 v~~~~v~~~~--~~~~~~~~~~P~~~~~~~~--~~p~vv~~HGgg~--------~~~~~~~~--~~~~~~~~la~~~g~~ 118 (338)
T 2o7r_A 53 VLTKDLALNP--LHNTFVRLFLPRHALYNSA--KLPLVVYFHGGGF--------ILFSAAST--IFHDFCCEMAVHAGVV 118 (338)
T ss_dssp EEEEEEEEET--TTTEEEEEEEEGGGGGSSC--CEEEEEEECCSTT--------TSCCTTBH--HHHHHHHHHHHHHTCE
T ss_pred EEEEEEEecC--CCCeEEEEEeCCCCCcCCC--CceEEEEEcCCcC--------cCCCCCch--hHHHHHHHHHHHCCcE
Confidence 3667788865 56688889999864 2333 4599999875421 11111110 0011245677 78999
Q ss_pred EEe
Q 007620 558 VLA 560 (595)
Q Consensus 558 Vl~ 560 (595)
|+.
T Consensus 119 vv~ 121 (338)
T 2o7r_A 119 IAS 121 (338)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 311
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.37 E-value=5.7 Score=37.91 Aligned_cols=41 Identities=12% Similarity=0.234 Sum_probs=26.5
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccC
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES 80 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~ 80 (595)
......++|||+ | |++... .....|+.++.++|+.+.+...
T Consensus 73 ~p~gia~~~dG~-l-~vad~~------~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 73 KVSGLAFTSNGD-L-VATGWN------ADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EEEEEEECTTSC-E-EEEEEC------TTSCEEEEEECTTSCEEEEEEC
T ss_pred CceeEEEcCCCc-E-EEEecc------CCcceEEEEcCCCCeEEEEEeC
Confidence 466778999998 4 444321 1234688888888887666443
No 312
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.27 E-value=1.9 Score=40.34 Aligned_cols=74 Identities=9% Similarity=-0.053 Sum_probs=42.7
Q ss_pred eEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCce-EecccCCCccc
Q 007620 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICL 85 (595)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~-~~lt~~~~~~~ 85 (595)
|...|++ +|+..+-. ++.. ...--.+++|++|+.+. .....++++|+++.+. .++....+
T Consensus 77 v~~iD~~----Tgkv~~~~-l~~~--~FgeGit~~g~~Ly~lt---------w~~~~v~V~D~~Tl~~~~ti~~~~e--- 137 (268)
T 3nok_A 77 LRQLSLE----SAQPVWME-RLGN--IFAEGLASDGERLYQLT---------WTEGLLFTWSGMPPQRERTTRYSGE--- 137 (268)
T ss_dssp EEECCSS----CSSCSEEE-ECTT--CCEEEEEECSSCEEEEE---------SSSCEEEEEETTTTEEEEEEECSSC---
T ss_pred EEEEECC----CCcEEeEE-CCCC--cceeEEEEeCCEEEEEE---------ccCCEEEEEECCcCcEEEEEeCCCc---
Confidence 4555666 56554433 4543 33334677888886654 2357899999998774 34432221
Q ss_pred cccccceEEecCCcEEEEE
Q 007620 86 NAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 86 ~~~~~~~~Wspdg~~l~~~ 104 (595)
....++||+.|+.+
T Consensus 138 -----GwGLt~Dg~~L~vS 151 (268)
T 3nok_A 138 -----GWGLCYWNGKLVRS 151 (268)
T ss_dssp -----CCCEEEETTEEEEE
T ss_pred -----eeEEecCCCEEEEE
Confidence 22334678877664
No 313
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.10 E-value=3.9 Score=37.79 Aligned_cols=57 Identities=9% Similarity=0.029 Sum_probs=34.1
Q ss_pred cceEEEEcC-CCCee-ecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEe
Q 007620 156 TAQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-REL 224 (595)
Q Consensus 156 ~~~l~~~d~-~g~~~-~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l 224 (595)
.+.|.++|+ +|++. .+.-+..+......+++++|+..... ...++++|.++.+. ..+
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~------------~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR------------NHEGFVYDLATLTPRARF 101 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------------SSEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee------------CCEEEEEECCcCcEEEEE
Confidence 467889999 77643 33322222223344457888777543 34899999986554 444
No 314
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.07 E-value=2.4 Score=43.17 Aligned_cols=128 Identities=11% Similarity=0.067 Sum_probs=68.6
Q ss_pred CCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCce--EecccCCCccccccccceEEe
Q 007620 18 LGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESPDICLNAVFGSFVWV 95 (595)
Q Consensus 18 ~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~--~~lt~~~~~~~~~~~~~~~Ws 95 (595)
++....+. ........+.|+|+|++|++.-.... .....+++++.+++-. +.+.... ....+.++
T Consensus 168 ~~~v~~~~--~~~~~P~~ia~d~~G~~lyvad~~~~-----~~~~~v~~~~~~g~~~~~~~l~~~~------~p~giavd 234 (430)
T 3tc9_A 168 KEYVSTVY--SGLSKVRTICWTHEADSMIITNDQNN-----NDRPNNYILTRESGFKVITELTKGQ------NCNGAETH 234 (430)
T ss_dssp TTEEEEEE--CCCSCEEEEEECTTSSEEEEEECCSC-----TTSEEEEEEEGGGTSCSEEEEEECS------SCCCEEEC
T ss_pred CCEEEEEe--cCCCCcceEEEeCCCCEEEEEeCCCC-----cccceEEEEeCCCceeeeeeeccCC------CceEEEEe
Confidence 44444443 23334677899999997766543210 1123466666544322 2232111 23467788
Q ss_pred cCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCC-CeeecC--
Q 007620 96 NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-- 172 (595)
Q Consensus 96 pdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~lt-- 172 (595)
|++..|++.-. ...+|+++++++ ....+.
T Consensus 235 p~~g~lyv~d~------------------------------------------------~~~~V~~~~~~~~~~~~~~~~ 266 (430)
T 3tc9_A 235 PINGELYFNSW------------------------------------------------NAGQVFRYDFTTQETTPLFTI 266 (430)
T ss_dssp TTTCCEEEEET------------------------------------------------TTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEEC------------------------------------------------CCCEEEEEECCCCcEEEEEEc
Confidence 85444666411 124577777754 332221
Q ss_pred -CCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCC
Q 007620 173 -TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (595)
Q Consensus 173 -~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g 218 (595)
.......++++|+|++|+++... ...|++++.++
T Consensus 267 ~~~~~P~gia~~pdG~~lyv~d~~------------~~~I~~~~~d~ 301 (430)
T 3tc9_A 267 QDSGWEFHIQFHPSGNYAYIVVVN------------QHYILRSDYDW 301 (430)
T ss_dssp SSSSCCEEEEECTTSSEEEEEETT------------TTEEEEEEEET
T ss_pred CCCCcceeEEEcCCCCEEEEEECC------------CCEEEEEeCCc
Confidence 11234578999999988888542 23677766543
No 315
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=93.04 E-value=0.078 Score=49.84 Aligned_cols=67 Identities=13% Similarity=0.030 Sum_probs=44.4
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCc-ccCCCCchhHHHhccCeEEE
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~-~~~~~~~~~q~la~~GY~Vl 559 (595)
..+.+.++ .||.+|.++++.|.+ ++. |+||++|+. +.. .........+.|+.+||.|+
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~----~~~--p~vv~~HG~--------------~~~~~~~~~~~~~~~l~~~G~~v~ 79 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFG----EIY--DMAIIFHGF--------------TANRNTSLLREIANSLRDENIASV 79 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSS----SSE--EEEEEECCT--------------TCCTTCHHHHHHHHHHHHTTCEEE
T ss_pred cceEEEec-cCCEEEEEEEEcCCC----CCC--CEEEEEcCC--------------CCCccccHHHHHHHHHHhCCcEEE
Confidence 45555555 699999999999874 123 899987742 111 01011123568999999999
Q ss_pred eCCCCceeec
Q 007620 560 AGPSIPIIGE 569 (595)
Q Consensus 560 ~~~~~~~~~~ 569 (595)
. ++.|..|.
T Consensus 80 ~-~d~~G~G~ 88 (270)
T 3pfb_A 80 R-FDFNGHGD 88 (270)
T ss_dssp E-ECCTTSTT
T ss_pred E-EccccccC
Confidence 9 88877664
No 316
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=92.99 E-value=0.2 Score=44.60 Aligned_cols=60 Identities=10% Similarity=0.077 Sum_probs=39.9
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceee
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~ 568 (595)
..||.+|++++|.|.+ +. |+||++|+.. +....|... ...+.|+++||.|+. ++.|..|
T Consensus 10 ~~~g~~l~~~~~~~~~-----~~--~~vv~~hG~~-----------~~~~~~~~~--~~~~~l~~~G~~v~~-~d~~g~g 68 (207)
T 3bdi_A 10 DVNGTRVFQRKMVTDS-----NR--RSIALFHGYS-----------FTSMDWDKA--DLFNNYSKIGYNVYA-PDYPGFG 68 (207)
T ss_dssp EETTEEEEEEEECCTT-----CC--EEEEEECCTT-----------CCGGGGGGG--THHHHHHTTTEEEEE-ECCTTST
T ss_pred eeCCcEEEEEEEeccC-----CC--CeEEEECCCC-----------CCccccchH--HHHHHHHhCCCeEEE-EcCCccc
Confidence 3599999999999976 22 8888877421 111112110 135789999999999 7777555
Q ss_pred c
Q 007620 569 E 569 (595)
Q Consensus 569 ~ 569 (595)
.
T Consensus 69 ~ 69 (207)
T 3bdi_A 69 R 69 (207)
T ss_dssp T
T ss_pred c
Confidence 3
No 317
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=92.83 E-value=0.092 Score=54.14 Aligned_cols=52 Identities=23% Similarity=0.395 Sum_probs=35.4
Q ss_pred EEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceee
Q 007620 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 494 ~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~ 568 (595)
.|.|++++|++- .+.|+||++|+ +.... ..+..+.||++||+|+. ++....+
T Consensus 160 ~l~~~l~~P~~~-----~~~P~Vv~lhG--------------~~~~~---~~~~a~~La~~Gy~Vla-~D~rG~~ 211 (446)
T 3hlk_A 160 RVRGTLFLPPEP-----GPFPGIVDMFG--------------TGGGL---LEYRASLLAGKGFAVMA-LAYYNYE 211 (446)
T ss_dssp TEEEEEEECSSS-----CCBCEEEEECC--------------SSCSC---CCHHHHHHHTTTCEEEE-ECCSSST
T ss_pred eEEEEEEeCCCC-----CCCCEEEEECC--------------CCcch---hhHHHHHHHhCCCEEEE-eccCCCC
Confidence 799999999752 24499998764 22111 12236899999999999 6655443
No 318
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=92.81 E-value=5 Score=37.04 Aligned_cols=77 Identities=9% Similarity=-0.017 Sum_probs=46.7
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceE-ecccCCCc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK-PLFESPDI 83 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~-~lt~~~~~ 83 (595)
+.|...|++ +|+..+-..++.. ...--.+++|++|+-+.- ....++++|.++.+.. ++....
T Consensus 43 S~v~~vD~~----tgkv~~~~~l~~~--~fgeGi~~~~~~ly~ltw---------~~~~v~v~D~~tl~~~~ti~~~~-- 105 (243)
T 3mbr_X 43 SSVRKVDLE----TGRILQRAEVPPP--YFGAGIVAWRDRLIQLTW---------RNHEGFVYDLATLTPRARFRYPG-- 105 (243)
T ss_dssp CEEEEEETT----TCCEEEEEECCTT--CCEEEEEEETTEEEEEES---------SSSEEEEEETTTTEEEEEEECSS--
T ss_pred ceEEEEECC----CCCEEEEEeCCCC--cceeEEEEeCCEEEEEEe---------eCCEEEEEECCcCcEEEEEeCCC--
Confidence 456677887 7776655445544 334446677888766542 3578999999987643 332211
Q ss_pred cccccccceEEecCCcEEEEE
Q 007620 84 CLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~ 104 (595)
.....++|++.|+.+
T Consensus 106 ------~Gwglt~dg~~L~vS 120 (243)
T 3mbr_X 106 ------EGWALTSDDSHLYMS 120 (243)
T ss_dssp ------CCCEEEECSSCEEEE
T ss_pred ------CceEEeeCCCEEEEE
Confidence 123344677776664
No 319
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=92.63 E-value=0.08 Score=54.14 Aligned_cols=52 Identities=25% Similarity=0.373 Sum_probs=35.1
Q ss_pred EEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceee
Q 007620 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 494 ~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~ 568 (595)
.|.|++++|++- + +.|+||++|+ +...+ ..+..+.||++||+|+. ++.+..+
T Consensus 144 ~l~~~l~~P~~~---~--~~P~Vv~~hG--------------~~~~~---~~~~a~~La~~Gy~V~a-~D~rG~g 195 (422)
T 3k2i_A 144 RVRATLFLPPGP---G--PFPGIIDIFG--------------IGGGL---LEYRASLLAGHGFATLA-LAYYNFE 195 (422)
T ss_dssp TEEEEEEECSSS---C--CBCEEEEECC--------------TTCSC---CCHHHHHHHTTTCEEEE-EECSSST
T ss_pred cEEEEEEcCCCC---C--CcCEEEEEcC--------------CCcch---hHHHHHHHHhCCCEEEE-EccCCCC
Confidence 799999999862 1 3499998764 22211 12236899999999999 5554433
No 320
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.38 E-value=3.5 Score=38.60 Aligned_cols=129 Identities=9% Similarity=-0.011 Sum_probs=65.6
Q ss_pred ceEEEEcC-CCC-eeecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE-EEeccCCCCccC
Q 007620 157 AQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDI 233 (595)
Q Consensus 157 ~~l~~~d~-~g~-~~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~l~~~~~~~~~ 233 (595)
.+|.++|+ +|+ .+.+..+..+ .....++|++|+..... ...++++|.++.+. ..+.-.
T Consensus 75 g~v~~iD~~Tgkv~~~~l~~~~F-geGit~~g~~Ly~ltw~------------~~~v~V~D~~Tl~~~~ti~~~------ 135 (268)
T 3nok_A 75 GTLRQLSLESAQPVWMERLGNIF-AEGLASDGERLYQLTWT------------EGLLFTWSGMPPQRERTTRYS------ 135 (268)
T ss_dssp TEEEECCSSCSSCSEEEECTTCC-EEEEEECSSCEEEEESS------------SCEEEEEETTTTEEEEEEECS------
T ss_pred CEEEEEECCCCcEEeEECCCCcc-eeEEEEeCCEEEEEEcc------------CCEEEEEECCcCcEEEEEeCC------
Confidence 34778888 674 3334223322 22345578888777542 24899999886554 444321
Q ss_pred CccccccccCCCCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccc--cCc---cccceeecC
Q 007620 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK--LDL---RFRSVSWCD 308 (595)
Q Consensus 234 ~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~--~~~---~~~~~~wsp 308 (595)
.......+|++ .|+.. + ..+.++++|. .+......+.- ... ....+.|.
T Consensus 136 ----------~eGwGLt~Dg~-~L~vS---d---------Gs~~l~~iDp--~T~~v~~~I~V~~~g~~v~~lNeLe~~- 189 (268)
T 3nok_A 136 ----------GEGWGLCYWNG-KLVRS---D---------GGTMLTFHEP--DGFALVGAVQVKLRGQPVELINELECA- 189 (268)
T ss_dssp ----------SCCCCEEEETT-EEEEE---C---------SSSEEEEECT--TTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred ----------CceeEEecCCC-EEEEE---C---------CCCEEEEEcC--CCCeEEEEEEeCCCCcccccccccEEe-
Confidence 11223345665 24332 1 2346777774 33222222221 111 12234566
Q ss_pred CCcEEEEEEeecccceEEEEEeCCCC
Q 007620 309 DSLALVNETWYKTSQTRTWLVCPGSK 334 (595)
Q Consensus 309 Dg~~l~~~~~~~~~~~~L~~~d~~~~ 334 (595)
||..++ ..+. ...|.+||++++
T Consensus 190 dG~lya-nvw~---s~~I~vIDp~TG 211 (268)
T 3nok_A 190 NGVIYA-NIWH---SSDVLEIDPATG 211 (268)
T ss_dssp TTEEEE-EETT---CSEEEEECTTTC
T ss_pred CCEEEE-EECC---CCeEEEEeCCCC
Confidence 675333 3232 238999999984
No 321
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=92.34 E-value=0.079 Score=50.74 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=31.2
Q ss_pred ceEEEEEECCC-CcEEEEEEEcCCCCCCCCCCCCcEEEEe
Q 007620 481 QKEMIKYQRKD-GVPLTATLYLPPGYDQSKDGPLPCLFWA 519 (595)
Q Consensus 481 ~~e~v~~~~~D-G~~i~g~l~~P~~~~~~k~y~lP~vv~~ 519 (595)
..+.+++++.+ |.++..+||+|++|+++++| |+|++.
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y~~~~~y--Pvly~l 49 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPASGY--PILYML 49 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTTCE--EEEEES
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCCCCCCCC--CEEEEe
Confidence 78889999886 68999999999999887766 987653
No 322
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=92.34 E-value=0.15 Score=49.86 Aligned_cols=67 Identities=15% Similarity=0.166 Sum_probs=45.7
Q ss_pred ceEEE-EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 481 QKEMI-KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v-~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
..+.+ .+...||.+|.++++.|.+ + +.|+||++|+. +.... .+....+.|+.+||.|+
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~----~--~~p~vv~~HG~--------------~~~~~-~~~~~~~~l~~~g~~vi 91 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTG----T--PKALIFVSHGA--------------GEHSG-RYEELARMLMGLDLLVF 91 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSS----C--CSEEEEEECCT--------------TCCGG-GGHHHHHHHHTTTEEEE
T ss_pred ccccCceEEccCCeEEEEEEeCCCC----C--CCcEEEEECCC--------------Ccccc-hHHHHHHHHHhCCCeEE
Confidence 34444 7788999999999998874 1 23899987642 11111 11123578899999999
Q ss_pred eCCCCceeec
Q 007620 560 AGPSIPIIGE 569 (595)
Q Consensus 560 ~~~~~~~~~~ 569 (595)
. ++.+..|.
T Consensus 92 ~-~D~~G~G~ 100 (342)
T 3hju_A 92 A-HDHVGHGQ 100 (342)
T ss_dssp E-ECCTTSTT
T ss_pred E-EcCCCCcC
Confidence 9 88887664
No 323
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=91.90 E-value=8.1 Score=36.04 Aligned_cols=49 Identities=14% Similarity=0.195 Sum_probs=27.9
Q ss_pred eEEEEcCCCCeeecCC---CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCc
Q 007620 158 QLVLGSLDGTAKDFGT---PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK 219 (595)
Q Consensus 158 ~l~~~d~~g~~~~lt~---~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~ 219 (595)
.|++++.+++...+.. ......+.++++|+ |+++... ...|++++.++.
T Consensus 168 ~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~------------~~~i~~~~~~g~ 219 (300)
T 2qc5_A 168 SIGRITNTGKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIM------------GNKIGRITTTGE 219 (300)
T ss_dssp EEEEECTTCCEEEEECSSTTCCEEEEEECTTSS-EEEEETT------------TTEEEEECTTCC
T ss_pred eEEEECCCCcEEEeeCCCCCCCcceEEECCCCC-EEEEccC------------CCEEEEEcCCCc
Confidence 4666666554443321 12345788899884 5555432 236888888443
No 324
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=91.82 E-value=8.2 Score=35.93 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=28.4
Q ss_pred eeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEe
Q 007620 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (595)
Q Consensus 176 ~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l 224 (595)
....++|.|+++.|+++.+.. ..|+.+|..+...+.+
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~------------~~I~~ld~~g~v~~~i 64 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKP------------AAIVEMTTNGDLIRTI 64 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETT------------EEEEEEETTCCEEEEE
T ss_pred CcceeEEeCCCCEEEEEECCC------------CeEEEEeCCCCEEEEE
Confidence 356899999999998886542 4799999987666665
No 325
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=91.62 E-value=0.27 Score=46.55 Aligned_cols=62 Identities=16% Similarity=0.188 Sum_probs=43.6
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCc
Q 007620 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (595)
Q Consensus 486 ~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~ 565 (595)
.++..||.+|+++++.|.+ + +.|+||++|+. ..... .+....+.|+.+||.|+. ++.|
T Consensus 21 ~~~~~~g~~l~~~~~~~~~----~--~~~~vv~~hG~--------------~~~~~-~~~~~~~~l~~~g~~v~~-~d~~ 78 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG----T--PKALIFVSHGA--------------GEHSG-RYEELARMLMGLDLLVFA-HDHV 78 (303)
T ss_dssp EEECTTSCEEEEEEECCSS----C--CSEEEEEECCT--------------TCCGG-GGHHHHHHHHHTTEEEEE-ECCT
T ss_pred eEecCCCeEEEEEEeccCC----C--CCeEEEEECCC--------------Cchhh-HHHHHHHHHHhCCCcEEE-eCCC
Confidence 7788999999999998874 2 23899987642 11101 111235789999999999 8888
Q ss_pred eeec
Q 007620 566 IIGE 569 (595)
Q Consensus 566 ~~~~ 569 (595)
..|.
T Consensus 79 G~G~ 82 (303)
T 3pe6_A 79 GHGQ 82 (303)
T ss_dssp TSTT
T ss_pred CCCC
Confidence 7765
No 326
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.52 E-value=4.7 Score=39.67 Aligned_cols=159 Identities=16% Similarity=0.073 Sum_probs=83.3
Q ss_pred eEEEecCCCCCCCCceeee--cC-CC--CCcccceEEcc--CCCEEEEEEecccccccCCCceEEEEEECCCCceEeccc
Q 007620 7 IGIHRLLPDDSLGPEKEVH--GY-PD--GAKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (595)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt--~~-~~--~~~~~~~~~SP--DG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~ 79 (595)
||++|++. .+++.++|. .. +. ........+.+ ||+.-.|+.+.... ....+||.++.+++..+.+..
T Consensus 85 I~~~d~~~--~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~----~s~ielf~~d~~~~~~~~~~~ 158 (355)
T 3sre_A 85 ILLMDLNE--KEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGS----SSTVEVFKFQEEEKSLLHLKT 158 (355)
T ss_dssp EEEEETTS--SSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTT----CCEEEEEEEETTTTEEEEEEE
T ss_pred EEEEecCC--CCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCC----CCeEEEEEEECCCCEEEEEec
Confidence 88888862 234555554 21 11 11233445544 67755666654211 235678888887776665544
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceE
Q 007620 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (595)
Q Consensus 80 ~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 159 (595)
.....++ ........++|+ ++++...- - ++.. ...... .. . .....|
T Consensus 159 ~~g~~~~-~pND~~v~~~G~-fyvt~~~~-f----------------td~~----~~~~e~-~~----~-----~~~g~v 205 (355)
T 3sre_A 159 IRHKLLP-SVNDIVAVGPEH-FYATNDHY-F----------------IDPY----LKSWEM-HL----G-----LAWSFV 205 (355)
T ss_dssp ECCTTCS-SEEEEEEEETTE-EEEEESCS-C----------------SSHH----HHHHHH-HT----T-----CCCEEE
T ss_pred cccCCCC-CCceEEEeCCCC-EEecCCcE-e----------------CCcc----cccchh-hc----c-----CCccEE
Confidence 3332111 234778888887 33331100 0 0000 000000 00 0 024678
Q ss_pred EEEcCCCCeeecCCC-CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC
Q 007620 160 VLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (595)
Q Consensus 160 ~~~d~~g~~~~lt~~-~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (595)
|.++. ++.+.+... ..-..++|||||++|+++... ...|++++++
T Consensus 206 yr~d~-~~~~~~~~~l~~pNGia~spDg~~lYvadt~------------~~~I~~~~~~ 251 (355)
T 3sre_A 206 TYYSP-NDVRVVAEGFDFANGINISPDGKYVYIAELL------------AHKIHVYEKH 251 (355)
T ss_dssp EEECT-TCCEEEEEEESSEEEEEECTTSSEEEEEEGG------------GTEEEEEEEC
T ss_pred EEEEC-CeEEEeecCCcccCcceECCCCCEEEEEeCC------------CCeEEEEEEC
Confidence 88876 355544332 234589999999999998653 2378888865
No 327
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=91.12 E-value=0.28 Score=47.23 Aligned_cols=60 Identities=7% Similarity=0.087 Sum_probs=35.4
Q ss_pred eEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 482 ~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
.+.+.|. +..+...+|+|.+-. + +.|+||++|++-+. .+.... .....+.|+++||+|+.
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~~--~--~~p~vv~~HGgg~~--------~~~~~~----~~~~~~~l~~~G~~v~~ 117 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKTT--N--QAPLFVFVHGGYWQ--------EMDMSM----SCSIVGPLVRRGYRVAV 117 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTCC--T--TCCEEEEECCSTTT--------SCCGGG----SCTTHHHHHHTTCEEEE
T ss_pred eeeeccC---CCCcEEEEEecCCCC--C--CCCEEEEECCCcCc--------CCChhH----HHHHHHHHHhCCCEEEE
Confidence 4455564 445567778887422 2 44999998753110 111111 12235789999999998
No 328
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.83 E-value=5.3 Score=38.42 Aligned_cols=66 Identities=20% Similarity=0.168 Sum_probs=38.5
Q ss_pred ccceEEcc-CCCEEEEEEeccccc--------ccCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEE
Q 007620 33 INFVSWSP-DGKRIAFSVRVDEED--------NVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIF 103 (595)
Q Consensus 33 ~~~~~~SP-DG~~laf~~~~~~~~--------~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~ 103 (595)
.....+.| ||+ |++........ .+......|++++.++++.+.+..... ....+.|+|||+.|++
T Consensus 128 p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~-----~p~gia~~~dg~~lyv 201 (322)
T 2fp8_A 128 LYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH-----VPGGAEVSADSSFVLV 201 (322)
T ss_dssp EEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES-----CCCEEEECTTSSEEEE
T ss_pred cceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc-----cCcceEECCCCCEEEE
Confidence 45678999 895 54443210000 000123679999998887655422111 2346899999998877
Q ss_pred E
Q 007620 104 T 104 (595)
Q Consensus 104 ~ 104 (595)
.
T Consensus 202 ~ 202 (322)
T 2fp8_A 202 A 202 (322)
T ss_dssp E
T ss_pred E
Confidence 5
No 329
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=90.78 E-value=0.46 Score=44.34 Aligned_cols=63 Identities=16% Similarity=0.214 Sum_probs=37.9
Q ss_pred EEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCC
Q 007620 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 563 (595)
Q Consensus 484 ~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~ 563 (595)
...++-.||..+...++.|.+ + +. |+||++|++-+ ..+....| ....+.|+++||.|+. ++
T Consensus 40 ~~~i~~~~~~~~~~~~~~p~~--~--~~--p~vv~~HGgg~--------~~~~~~~~----~~~~~~l~~~G~~v~~-~d 100 (262)
T 2pbl_A 40 RLNLSYGEGDRHKFDLFLPEG--T--PV--GLFVFVHGGYW--------MAFDKSSW----SHLAVGALSKGWAVAM-PS 100 (262)
T ss_dssp EEEEESSSSTTCEEEEECCSS--S--CS--EEEEEECCSTT--------TSCCGGGC----GGGGHHHHHTTEEEEE-EC
T ss_pred ccccccCCCCCceEEEEccCC--C--CC--CEEEEEcCccc--------ccCChHHH----HHHHHHHHhCCCEEEE-eC
Confidence 334444567777888999976 2 23 99999875310 00111111 1235788999999999 55
Q ss_pred Cc
Q 007620 564 IP 565 (595)
Q Consensus 564 ~~ 565 (595)
.+
T Consensus 101 ~~ 102 (262)
T 2pbl_A 101 YE 102 (262)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 330
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=90.46 E-value=0.22 Score=46.41 Aligned_cols=70 Identities=11% Similarity=0.076 Sum_probs=44.3
Q ss_pred ceEEEEE-ECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 481 QKEMIKY-QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~-~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
+.+.+++ ++.||.+|..+.+.|.+ + +.|+||++|+.. +....+. .....++++++||.|+
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~--~----~~~~vv~~HG~~-----------~~~~~~~--~~~~~~~l~~~g~~v~ 70 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ--D----ERPTCIWLGGYR-----------SDMTGTK--ALEMDDLAASLGVGAI 70 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS--T----TSCEEEEECCTT-----------CCTTSHH--HHHHHHHHHHHTCEEE
T ss_pred CcceEEEeeccCcceEEEEeccCCC--C----CCCeEEEECCCc-----------cccccch--HHHHHHHHHhCCCcEE
Confidence 5566666 67799999998887653 2 128899877420 1111110 0112467889999999
Q ss_pred eCCCCceeecC
Q 007620 560 AGPSIPIIGEG 570 (595)
Q Consensus 560 ~~~~~~~~~~~ 570 (595)
. ++.|..|.-
T Consensus 71 ~-~d~~G~G~s 80 (270)
T 3llc_A 71 R-FDYSGHGAS 80 (270)
T ss_dssp E-ECCTTSTTC
T ss_pred E-eccccCCCC
Confidence 9 888876653
No 331
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=90.16 E-value=0.16 Score=51.49 Aligned_cols=63 Identities=8% Similarity=-0.093 Sum_probs=39.2
Q ss_pred ceEEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeE--
Q 007620 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA-- 557 (595)
Q Consensus 481 ~~e~v~~~~~-DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~-- 557 (595)
+.+.++|.+. .|.++..+||+|.+++ +++| |+|++.|++ -+..........+.|+++|++
T Consensus 167 ~v~~~~~~S~~~g~~~~~~vy~P~~~~-~~~~--PvlvllHG~--------------~~~~~~~~~~~~~~l~~~g~~~p 229 (403)
T 3c8d_A 167 PAKEIIWKSERLKNSRRVWIFTTGDVT-AEER--PLAVLLDGE--------------FWAQSMPVWPVLTSLTHRQQLPP 229 (403)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEC------CCC--CEEEESSHH--------------HHHHTSCCHHHHHHHHHTTSSCS
T ss_pred ceEEEEEEccccCCcEEEEEEeCCCCC-CCCC--CEEEEeCCH--------------HHhhcCcHHHHHHHHHHcCCCCC
Confidence 6778888775 7889999999999875 3445 999997642 110011111235788999985
Q ss_pred --EEe
Q 007620 558 --VLA 560 (595)
Q Consensus 558 --Vl~ 560 (595)
|+.
T Consensus 230 ~iVV~ 234 (403)
T 3c8d_A 230 AVYVL 234 (403)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 777
No 332
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=90.02 E-value=0.14 Score=50.11 Aligned_cols=25 Identities=12% Similarity=0.139 Sum_probs=18.5
Q ss_pred cEEEEEEEcCCCCCCCCCCCCcEEEEeccC
Q 007620 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPE 522 (595)
Q Consensus 493 ~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~ 522 (595)
..|.+++|.|.+- + +.|+||++|++
T Consensus 65 ~~i~~~~~~p~~~---~--~~p~vv~~HGG 89 (322)
T 3fak_A 65 AGCAAEWVRAPGC---Q--AGKAILYLHGG 89 (322)
T ss_dssp TTEEEEEEECTTC---C--TTCEEEEECCS
T ss_pred CCeEEEEEeCCCC---C--CccEEEEEcCC
Confidence 4599999999752 2 34999998753
No 333
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=89.85 E-value=0.59 Score=45.22 Aligned_cols=60 Identities=13% Similarity=0.154 Sum_probs=38.7
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHh-ccCeEEE
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la-~~GY~Vl 559 (595)
..+.+++++.|| .|.+++| |. . + +.|+||++|++.+ +.|....+ ......|| ..||.|+
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~--~--~--~~p~vv~~HGgg~--------~~g~~~~~----~~~~~~la~~~g~~Vv 114 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ--K--P--DSPVLVYYHGGGF--------VICSIESH----DALCRRIARLSNSTVV 114 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES--S--S--SEEEEEEECCSTT--------TSCCTGGG----HHHHHHHHHHHTSEEE
T ss_pred eEEEEEecCCCC-cEEEEEE-cC--C--C--CceEEEEECCccc--------ccCChhHh----HHHHHHHHHHhCCEEE
Confidence 578889998898 8999999 42 1 2 3499999875311 11221111 11245677 6799999
Q ss_pred e
Q 007620 560 A 560 (595)
Q Consensus 560 ~ 560 (595)
.
T Consensus 115 ~ 115 (311)
T 1jji_A 115 S 115 (311)
T ss_dssp E
T ss_pred E
Confidence 8
No 334
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=89.03 E-value=0.16 Score=45.57 Aligned_cols=61 Identities=13% Similarity=0.120 Sum_probs=39.3
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceeec
Q 007620 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 490 ~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
.||.+|+.+++.|.+ . +.. |+||++|+.. +....|... ...+.|+++||.|+. ++.+..|.
T Consensus 14 ~~g~~l~~~~~~p~~-~--~~~--~~vv~~hG~~-----------~~~~~~~~~--~~~~~l~~~G~~v~~-~d~~g~g~ 74 (210)
T 1imj_A 14 VQGQALFFREALPGS-G--QAR--FSVLLLHGIR-----------FSSETWQNL--GTLHRLAQAGYRAVA-IDLPGLGH 74 (210)
T ss_dssp ETTEEECEEEEECSS-S--CCS--CEEEECCCTT-----------CCHHHHHHH--THHHHHHHTTCEEEE-ECCTTSGG
T ss_pred eCCeEEEEEEeCCCC-C--CCC--ceEEEECCCC-----------Cccceeecc--hhHHHHHHCCCeEEE-ecCCCCCC
Confidence 489999999999975 2 123 8889876420 111111100 025689999999999 88776664
No 335
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=88.55 E-value=0.43 Score=50.44 Aligned_cols=54 Identities=20% Similarity=0.402 Sum_probs=33.9
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhc-cCeEEEe
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLA 560 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~-~GY~Vl~ 560 (595)
+.|.+.+. ++.|.+..+++ ++|+|||+|+|.|. .|+... +.. ..||+ +||+|+.
T Consensus 95 ~edcl~ln--v~~P~~~~~~~--~~Pv~v~iHGG~~~--------~g~~~~-----~~~-~~la~~~g~vvv~ 149 (542)
T 2h7c_A 95 SEDCLYLN--IYTPADLTKKN--RLPVMVWIHGGGLM--------VGAAST-----YDG-LALAAHENVVVVT 149 (542)
T ss_dssp ESCCCEEE--EEECSCTTSCC--CEEEEEEECCSTTT--------SCCSTT-----SCC-HHHHHHHTCEEEE
T ss_pred CCCCcEEE--EEECCCCCCCC--CCCEEEEECCCccc--------CCCccc-----cCH-HHHHhcCCEEEEe
Confidence 56887765 77898765544 45999998865432 232221 111 34554 7999998
No 336
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=88.07 E-value=0.7 Score=45.54 Aligned_cols=68 Identities=16% Similarity=0.204 Sum_probs=39.2
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCC------------CCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchh
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQ------------SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS 548 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~------------~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~ 548 (595)
..+.+.+.+ |..|..++|+|.+... ....+.|+||++|++.+ ..|..... .+....
T Consensus 71 ~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~--------~~g~~~~~--~~~~~~ 138 (351)
T 2zsh_A 71 FSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSF--------AHSSANSA--IYDTLC 138 (351)
T ss_dssp EEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTT--------TSCCTTBH--HHHHHH
T ss_pred eEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcC--------cCCCCcch--hHHHHH
Confidence 556677764 5668899999987520 01125599999875311 11111100 001124
Q ss_pred HHHh-ccCeEEEe
Q 007620 549 LIFL-ARRFAVLA 560 (595)
Q Consensus 549 q~la-~~GY~Vl~ 560 (595)
+.|| ++||+|+.
T Consensus 139 ~~la~~~g~~vv~ 151 (351)
T 2zsh_A 139 RRLVGLCKCVVVS 151 (351)
T ss_dssp HHHHHHHTSEEEE
T ss_pred HHHHHHcCCEEEE
Confidence 6778 78999998
No 337
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=87.43 E-value=25 Score=35.12 Aligned_cols=70 Identities=16% Similarity=0.055 Sum_probs=38.0
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~ 85 (595)
.|.+.|+. +++...... .....+....| ||+.|+.... ...|.++++.+++.........
T Consensus 154 ~i~iwd~~----~~~~~~~~~-~h~~~v~~l~~--~~~~l~sg~~----------dg~i~vwd~~~~~~~~~~~~h~--- 213 (435)
T 1p22_A 154 TIKIWDKN----TLECKRILT-GHTGSVLCLQY--DERVIITGSS----------DSTVRVWDVNTGEMLNTLIHHC--- 213 (435)
T ss_dssp CEEEEESS----SCCEEEEEC-CCSSCEEEEEC--CSSEEEEEET----------TSCEEEEESSSCCEEEEECCCC---
T ss_pred eEEEEeCC----CCeEEEEEc-CCCCcEEEEEE--CCCEEEEEcC----------CCeEEEEECCCCcEEEEEcCCC---
Confidence 47788887 555443331 12223444444 8887765542 2457777988887544332211
Q ss_pred cccccceEEec
Q 007620 86 NAVFGSFVWVN 96 (595)
Q Consensus 86 ~~~~~~~~Wsp 96 (595)
..+..+.|++
T Consensus 214 -~~v~~l~~~~ 223 (435)
T 1p22_A 214 -EAVLHLRFNN 223 (435)
T ss_dssp -SCEEEEECCT
T ss_pred -CcEEEEEEcC
Confidence 1355667753
No 338
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=87.19 E-value=14 Score=37.47 Aligned_cols=49 Identities=10% Similarity=-0.036 Sum_probs=29.9
Q ss_pred ceEEEEcCC-CCe-eecC-C--CCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCC
Q 007620 157 AQLVLGSLD-GTA-KDFG-T--PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (595)
Q Consensus 157 ~~l~~~d~~-g~~-~~lt-~--~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 217 (595)
.+|++++.+ |+. +.+. . ......++++|||++|+++... ...|++++.+
T Consensus 250 ~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~------------~~~I~~~~~d 303 (433)
T 4hw6_A 250 AMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG------------KHCIYRVDYN 303 (433)
T ss_dssp SEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT------------TTEEEEEEBC
T ss_pred CEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC------------CCEEEEEeCC
Confidence 457777774 654 3331 1 1122358999999988888542 2367776654
No 339
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=86.19 E-value=1.1 Score=42.52 Aligned_cols=69 Identities=7% Similarity=-0.003 Sum_probs=42.7
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
..+.++++. ||..+...++.+..-++ +.|+||++|+. +.... .+....+.|+.+||.|+.
T Consensus 19 ~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~p~vv~~hG~--------------~~~~~-~~~~~~~~l~~~g~~v~~ 78 (315)
T 4f0j_A 19 PVHYLDFTS-QGQPLSMAYLDVAPKKA----NGRTILLMHGK--------------NFCAG-TWERTIDVLADAGYRVIA 78 (315)
T ss_dssp CCEEEEEEE-TTEEEEEEEEEECCSSC----CSCEEEEECCT--------------TCCGG-GGHHHHHHHHHTTCEEEE
T ss_pred cceeEEEec-CCCCeeEEEeecCCCCC----CCCeEEEEcCC--------------CCcch-HHHHHHHHHHHCCCeEEE
Confidence 677788865 77777666664433122 22888887642 11111 111235789999999999
Q ss_pred CCCCceeecC
Q 007620 561 GPSIPIIGEG 570 (595)
Q Consensus 561 ~~~~~~~~~~ 570 (595)
++.|..|.-
T Consensus 79 -~d~~G~G~s 87 (315)
T 4f0j_A 79 -VDQVGFCKS 87 (315)
T ss_dssp -ECCTTSTTS
T ss_pred -eecCCCCCC
Confidence 888877653
No 340
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=86.00 E-value=0.54 Score=47.50 Aligned_cols=67 Identities=15% Similarity=0.076 Sum_probs=40.9
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
..+.+.++. +|.+|+++++.| + + + +.|+||++|+. ......+.......++++||.|+.
T Consensus 134 ~~~~~~i~~-~~~~l~~~~~~~-~-~--~--~~p~vv~~HG~--------------~~~~~~~~~~~~~~~~~~g~~vi~ 192 (405)
T 3fnb_A 134 PLKSIEVPF-EGELLPGYAIIS-E-D--K--AQDTLIVVGGG--------------DTSREDLFYMLGYSGWEHDYNVLM 192 (405)
T ss_dssp CCEEEEEEE-TTEEEEEEEECC-S-S--S--CCCEEEEECCS--------------SCCHHHHHHHTHHHHHHTTCEEEE
T ss_pred CcEEEEEeE-CCeEEEEEEEcC-C-C--C--CCCEEEEECCC--------------CCCHHHHHHHHHHHHHhCCcEEEE
Confidence 567777775 789999999943 2 1 2 23899997642 110000001112366789999999
Q ss_pred CCCCceeec
Q 007620 561 GPSIPIIGE 569 (595)
Q Consensus 561 ~~~~~~~~~ 569 (595)
++.|..|.
T Consensus 193 -~D~~G~G~ 200 (405)
T 3fnb_A 193 -VDLPGQGK 200 (405)
T ss_dssp -ECCTTSTT
T ss_pred -EcCCCCcC
Confidence 77776553
No 341
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=85.72 E-value=1.1 Score=42.66 Aligned_cols=64 Identities=13% Similarity=0.176 Sum_probs=40.1
Q ss_pred ceEEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~~-DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
+.+.++|.+. +|.+++.+ |+|.+ + |+||+.|+... .+....|... ....++++++||+|+
T Consensus 10 ~~~~~~~~S~~~~~~~~~~-~~P~~-------~-p~vvllHG~~~---------~~~~~~w~~~-~~~~~~~~~~~~~vv 70 (280)
T 1r88_A 10 PYENLMVPSPSMGRDIPVA-FLAGG-------P-HAVYLLDAFNA---------GPDVSNWVTA-GNAMNTLAGKGISVV 70 (280)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECCS-------S-SEEEEECCSSC---------CSSSCHHHHT-SCHHHHHTTSSSEEE
T ss_pred CEEEEEEECcccCCcceEE-EeCCC-------C-CEEEEECCCCC---------CCChhhhhhc-ccHHHHHhcCCeEEE
Confidence 6788898875 78999999 78875 1 78888764200 0000111111 012478888999999
Q ss_pred eCCCC
Q 007620 560 AGPSI 564 (595)
Q Consensus 560 ~~~~~ 564 (595)
. |+.
T Consensus 71 ~-pd~ 74 (280)
T 1r88_A 71 A-PAG 74 (280)
T ss_dssp E-ECC
T ss_pred E-ECC
Confidence 9 544
No 342
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=84.37 E-value=1.2 Score=41.57 Aligned_cols=65 Identities=9% Similarity=0.058 Sum_probs=40.1
Q ss_pred ceEEEEEECC--CCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEE
Q 007620 481 QKEMIKYQRK--DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (595)
Q Consensus 481 ~~e~v~~~~~--DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~V 558 (595)
..+.+++... +|.. .+.|++|..... + +.|+||++|+. ++... .+....+.|+++||.|
T Consensus 24 ~~~~~~~~~~~~~~~~-~~~l~~p~~~~~-~--~~p~vv~~HG~------------~~~~~---~~~~~~~~l~~~G~~v 84 (262)
T 1jfr_A 24 ATSQTSVSSLVASGFG-GGTIYYPTSTAD-G--TFGAVVISPGF------------TAYQS---SIAWLGPRLASQGFVV 84 (262)
T ss_dssp CEEEEEECTTTCSSSC-CEEEEEESCCTT-C--CEEEEEEECCT------------TCCGG---GTTTHHHHHHTTTCEE
T ss_pred CccceEecceeccCCC-ceeEEecCCCCC-C--CCCEEEEeCCc------------CCCch---hHHHHHHHHHhCCCEE
Confidence 5666667665 4543 678889976322 2 34999998742 11111 1123457899999999
Q ss_pred EeCCCCc
Q 007620 559 LAGPSIP 565 (595)
Q Consensus 559 l~~~~~~ 565 (595)
+. ++.+
T Consensus 85 ~~-~d~~ 90 (262)
T 1jfr_A 85 FT-IDTN 90 (262)
T ss_dssp EE-ECCS
T ss_pred EE-eCCC
Confidence 99 6654
No 343
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=84.33 E-value=22 Score=36.59 Aligned_cols=17 Identities=18% Similarity=0.258 Sum_probs=13.7
Q ss_pred eeeEECCCCCeEEEEEc
Q 007620 178 TAVEPSPDQKYVLITSM 194 (595)
Q Consensus 178 ~~~~~SpDg~~l~~~~~ 194 (595)
..++|+|+|+.|+++-.
T Consensus 313 ~~ia~~p~G~~lYvaD~ 329 (496)
T 3kya_A 313 FQIFIHPTGKYAYFGVI 329 (496)
T ss_dssp EEEEECTTSSEEEEEET
T ss_pred eEEEEcCCCCEEEEEeC
Confidence 47899999998877753
No 344
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=84.21 E-value=0.61 Score=44.99 Aligned_cols=66 Identities=17% Similarity=0.218 Sum_probs=41.2
Q ss_pred ceEEEEEECC-CCcEEEEEEEcCCCCCC-----CCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhcc
Q 007620 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQ-----SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR 554 (595)
Q Consensus 481 ~~e~v~~~~~-DG~~i~g~l~~P~~~~~-----~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~ 554 (595)
+...+++.+. =|.++.-.||+|++|+. +|+| |||.+.|+. .+....|.... ...++++..
T Consensus 13 ~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~--PVLYlLhG~-----------~~~~~~w~~~~-~~~~~~~~~ 78 (299)
T 4fol_A 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRI--PTVFYLSGL-----------TCTPDNASEKA-FWQFQADKY 78 (299)
T ss_dssp EEEEEEEECTTTSSEEEEEEEECGGGGCC------CB--CEEEEECCT-----------TCCHHHHHHHS-CHHHHHHHH
T ss_pred EEEEEEEECcccCCceEEEEEcCCCCCccccccCCCc--CEEEEECCC-----------CCChHHHHHhc-hHhHHHHHc
Confidence 4555666654 67899999999999853 4445 999997742 12222232111 112466667
Q ss_pred CeEEEe
Q 007620 555 RFAVLA 560 (595)
Q Consensus 555 GY~Vl~ 560 (595)
|.+|++
T Consensus 79 ~~~~v~ 84 (299)
T 4fol_A 79 GFAIVF 84 (299)
T ss_dssp TCEEEE
T ss_pred Cchhhc
Confidence 999998
No 345
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=83.98 E-value=18 Score=39.26 Aligned_cols=157 Identities=9% Similarity=-0.012 Sum_probs=85.8
Q ss_pred ceeeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCC--------ce
Q 007620 3 FFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG--------EA 74 (595)
Q Consensus 3 ~~~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g--------~~ 74 (595)
|.+.+|+.++.+ .+++.++|. ++. ...+.++++|..++++.......+..-....|.+++++++ +.
T Consensus 267 ~~~~~~~~~~~~--~~~~~~~l~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 340 (711)
T 4hvt_A 267 YNYDNYILDTKY--KNLKLQKIN-MPS---DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSL 340 (711)
T ss_dssp SCEEEEEEECSS--SSCEEEECC-SCT---TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTC
T ss_pred CceeEEEEcCCC--CCCcceEee-cCC---cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccc
Confidence 347788888752 235555664 343 3345677777544444321000000013567999998764 22
Q ss_pred Ee-cccCCCccccccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEE
Q 007620 75 KP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY 153 (595)
Q Consensus 75 ~~-lt~~~~~~~~~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 153 (595)
+. ++...+ ..+..+.|+.+ .|++... .+
T Consensus 341 ~~~~~~~~~----~~l~~~~~~~~--~l~~~~~---------------------~~------------------------ 369 (711)
T 4hvt_A 341 KILFTPTAN----EVFNFISTTKD--RVFLATY---------------------DN------------------------ 369 (711)
T ss_dssp EEEECCCTT----EEEEEEEECSS--CEEEEEE---------------------ET------------------------
T ss_pred eEEECCCCC----CeEEEEEEECC--EEEEEEE---------------------EC------------------------
Confidence 33 333222 13457888876 3444321 00
Q ss_pred eecceEEEEcC-CCC--eee-cCCC--CeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccC
Q 007620 154 YTTAQLVLGSL-DGT--AKD-FGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL 227 (595)
Q Consensus 154 ~~~~~l~~~d~-~g~--~~~-lt~~--~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~ 227 (595)
...+|+++++ +|+ .+. +.-+ ..+...+.+++++.+++....-. .+..++.+|+. ++.+.+...
T Consensus 370 -~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~---------~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 370 -VVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSI---------VPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp -TEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSS---------SCCEEEEECTT-SCEEEEECC
T ss_pred -CEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCC---------CCCEEEEEeCC-CcEEEEecC
Confidence 1356788887 563 445 4322 34455677899988887754321 25689999988 666666543
No 346
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=83.71 E-value=37 Score=36.58 Aligned_cols=59 Identities=14% Similarity=0.055 Sum_probs=35.4
Q ss_pred eeeeEEEecCCCCCCCCceeeecCCCC-----CcccceEEcc---CCC--EEEEEEecccccccCCCceEEEEEECCCCc
Q 007620 4 FTGIGIHRLLPDDSLGPEKEVHGYPDG-----AKINFVSWSP---DGK--RIAFSVRVDEEDNVSSCKLRVWIADAETGE 73 (595)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~lt~~~~~-----~~~~~~~~SP---DG~--~laf~~~~~~~~~~~~~~~~L~v~d~~~g~ 73 (595)
...|+-+|.. +|+.+.-.++... ...+.|.+.. ||+ .+++... ....||++|.++|+
T Consensus 282 ~~sv~AlD~~----TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~---------~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 282 LASIVALDPD----TGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAP---------KNGFFFVLDRTNGK 348 (677)
T ss_dssp TTEEEEECTT----TCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECC---------TTSEEEEEETTTCC
T ss_pred eEEEEEEECC----CCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEEC---------CCCEEEEEECCCCC
Confidence 3458888887 7877654433221 1134555544 785 4444432 34789999999998
Q ss_pred eE
Q 007620 74 AK 75 (595)
Q Consensus 74 ~~ 75 (595)
..
T Consensus 349 ~l 350 (677)
T 1kb0_A 349 FI 350 (677)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 347
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=82.87 E-value=0.32 Score=48.84 Aligned_cols=55 Identities=13% Similarity=0.087 Sum_probs=31.7
Q ss_pred cEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCcee
Q 007620 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 567 (595)
Q Consensus 493 ~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~ 567 (595)
..+++.+..|.. +++ +.|+||+.|+. ++. ...+....+.||++||+|+. ++.+..
T Consensus 82 ~~~p~~~~~P~~--~~~--~~P~Vv~~HG~------------~~~---~~~~~~~a~~La~~Gy~V~~-~d~~g~ 136 (383)
T 3d59_A 82 MTTPANWNSPLR--PGE--KYPLVVFSHGL------------GAF---RTLYSAIGIDLASHGFIVAA-VEHRDR 136 (383)
T ss_dssp CEESSEETCCBC--CSS--CEEEEEEECCT------------TCC---TTTTHHHHHHHHHTTCEEEE-ECCCSS
T ss_pred eeeccccCCCcc--cCC--CCCEEEEcCCC------------CCC---chHHHHHHHHHHhCceEEEE-eccCCC
Confidence 445544444432 233 44999997742 111 11112346899999999999 666543
No 348
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=82.42 E-value=38 Score=32.98 Aligned_cols=63 Identities=14% Similarity=0.095 Sum_probs=37.4
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc--cccccceEEecC---CcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL--NAVFGSFVWVNN---STLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~--~~~~~~~~Wspd---g~~l~~~ 104 (595)
......|.|||+ | |+..+ ....|++++.++|+...+...+.... ..+...++++|| +..|++.
T Consensus 33 ~P~~ia~~pdG~-l-lVter--------~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 33 SPWGLAPLPGGD-L-LVSSR--------DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp SEEEEEECTTSC-E-EEEET--------TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred CceEEEEcCCCc-E-EEEEe--------cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 456779999997 4 44432 24689999877777655533221110 112347889986 4556554
No 349
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=82.38 E-value=2.3 Score=39.94 Aligned_cols=56 Identities=16% Similarity=0.340 Sum_probs=32.4
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 486 ~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
.++-.+|.++ .+|.|.+ + +.|+|||+|++-| +.|+...+ .......+++.||.|+.
T Consensus 8 ~~~~~~~~~~--~~y~p~~----~--~~p~iv~~HGGg~--------~~g~~~~~---~~~~~~~l~~~g~~Vi~ 63 (274)
T 2qru_A 8 NQTLANGATV--TIYPTTT----E--PTNYVVYLHGGGM--------IYGTKSDL---PEELKELFTSNGYTVLA 63 (274)
T ss_dssp EEECTTSCEE--EEECCSS----S--SCEEEEEECCSTT--------TSCCGGGC---CHHHHHHHHTTTEEEEE
T ss_pred cccccCCeeE--EEEcCCC----C--CCcEEEEEeCccc--------cCCChhhc---hHHHHHHHHHCCCEEEE
Confidence 4445678666 6777864 1 3399999875411 12221111 11123568888999998
No 350
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=81.64 E-value=2 Score=41.21 Aligned_cols=66 Identities=12% Similarity=0.120 Sum_probs=38.0
Q ss_pred ceEEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~~-DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
+.+.++|.+. .|.+|..+ +.| .+ +++ |+||+.|+... .+....|.... ...++++..||+|+
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p-~~---~~~--p~vvllHG~~~---------~~~~~~w~~~~-~~~~~~~~~~~~vv 70 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQS-GG---ANS--PALYLLDGLRA---------QDDFSGWDINT-PAFEWYDQSGLSVV 70 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EEC-CS---TTB--CEEEEECCTTC---------CSSSCHHHHHC-CHHHHHTTSSCEEE
T ss_pred eEEEEEEECccCCCceEEE-ECC-CC---CCC--CEEEEeCCCCC---------CCCcchhhcCC-CHHHHHhcCCeEEE
Confidence 5677888776 57788877 444 43 345 99999774200 00011111100 11367888999999
Q ss_pred eCCCC
Q 007620 560 AGPSI 564 (595)
Q Consensus 560 ~~~~~ 564 (595)
. |+.
T Consensus 71 ~-p~~ 74 (304)
T 1sfr_A 71 M-PVG 74 (304)
T ss_dssp E-ECC
T ss_pred E-ECC
Confidence 8 543
No 351
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=81.34 E-value=0.82 Score=43.39 Aligned_cols=22 Identities=18% Similarity=0.212 Sum_probs=18.6
Q ss_pred hhHHHhccCeEEEeCCCCceeec
Q 007620 547 SSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 547 ~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
..+.|+++||.|+. +|.|..|.
T Consensus 70 la~~La~~Gy~Via-~Dl~GhG~ 91 (281)
T 4fbl_A 70 LAEGFARAGYTVAT-PRLTGHGT 91 (281)
T ss_dssp HHHHHHHTTCEEEE-CCCTTSSS
T ss_pred HHHHHHHCCCEEEE-ECCCCCCC
Confidence 35799999999999 99987664
No 352
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=81.16 E-value=16 Score=36.41 Aligned_cols=69 Identities=14% Similarity=0.065 Sum_probs=41.8
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
..|.++|+.. -.....+..+.. .....++.+.. +|.+. ....|++++++++....+ ..
T Consensus 106 ~~l~v~dv~s---l~~~~~~~~~~~--~v~~i~~~~p~--~av~~----------~dG~L~v~dl~~~~~~~~---~~-- 163 (388)
T 1xip_A 106 NALYSLDLEE---LSEFRTVTSFEK--PVFQLKNVNNT--LVILN----------SVNDLSALDLRTKSTKQL---AQ-- 163 (388)
T ss_dssp SEEEEEESSS---TTCEEEEEECSS--CEEEEEECSSE--EEEEE----------TTSEEEEEETTTCCEEEE---EE--
T ss_pred CcEEEEEchh---hhccCccceeec--ceeeEEecCCC--EEEEE----------CCCCEEEEEccCCccccc---cC--
Confidence 4677888762 222223332222 24455665542 55543 237899999998876554 22
Q ss_pred ccccccceEEecCC
Q 007620 85 LNAVFGSFVWVNNS 98 (595)
Q Consensus 85 ~~~~~~~~~Wspdg 98 (595)
.+.++.|||+|
T Consensus 164 ---~Vs~v~WSpkG 174 (388)
T 1xip_A 164 ---NVTSFDVTNSQ 174 (388)
T ss_dssp ---SEEEEEECSSE
T ss_pred ---CceEEEEcCCc
Confidence 57899999999
No 353
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=80.98 E-value=0.99 Score=47.47 Aligned_cols=31 Identities=23% Similarity=0.638 Sum_probs=21.3
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCC
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPED 523 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~ 523 (595)
+.|.+.+ .++.|.+..+++ ++|+|||+|+|.
T Consensus 94 sedcl~l--~v~~P~~~~~~~--~~Pv~v~iHGGg 124 (534)
T 1llf_A 94 SEDCLTI--NVVRPPGTKAGA--NLPVMLWIFGGG 124 (534)
T ss_dssp CSCCCEE--EEEECTTCCTTC--CEEEEEEECCST
T ss_pred CCCCeEE--EEEECCCCCCCC--CceEEEEEeCCC
Confidence 4566655 577898755444 459999988653
No 354
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=79.69 E-value=56 Score=33.15 Aligned_cols=17 Identities=24% Similarity=0.469 Sum_probs=12.9
Q ss_pred eeeEECCC---CCeEEEEEc
Q 007620 178 TAVEPSPD---QKYVLITSM 194 (595)
Q Consensus 178 ~~~~~SpD---g~~l~~~~~ 194 (595)
..++|+|| +.+|+++..
T Consensus 80 lgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEE
T ss_pred eEEEECCCcCcCCEEEEEEe
Confidence 47899997 777777754
No 355
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=79.49 E-value=4.4 Score=42.32 Aligned_cols=70 Identities=14% Similarity=0.179 Sum_probs=47.0
Q ss_pred cccceEEccCCCEEEEEEeccc-ccc--cCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEe
Q 007620 32 KINFVSWSPDGKRIAFSVRVDE-EDN--VSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~-~~~--~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~ 105 (595)
...+..++++|. |.|...... ..+ +.-..+++|+++..+|+.+++...+.. .....+.||||++.|++..
T Consensus 477 sPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~---aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT---CEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC---ccccCCEECCCCCEEEEEE
Confidence 355678999995 777554210 000 002345899999999999888654332 1467899999999998864
No 356
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=79.37 E-value=33 Score=33.49 Aligned_cols=60 Identities=8% Similarity=-0.051 Sum_probs=34.7
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCC-ccccccccceEEecC---CcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-ICLNAVFGSFVWVNN---STLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~-~~~~~~~~~~~Wspd---g~~l~~~ 104 (595)
....+.|+|||+ | |++.+ ...|++++. +|+ +.+...+- ..-......+.++|| +..|++.
T Consensus 30 ~P~~ia~~pdG~-l-~V~e~---------~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~ 93 (354)
T 3a9g_A 30 VPWSIAPLGGGR-Y-LVTER---------PGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLY 93 (354)
T ss_dssp CEEEEEEEETTE-E-EEEET---------TTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CCeEEEEcCCCe-E-EEEeC---------CCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEE
Confidence 466789999996 4 44433 267888874 455 44432110 000013457889998 6666664
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=79.08 E-value=3.6 Score=43.53 Aligned_cols=68 Identities=15% Similarity=0.234 Sum_probs=46.0
Q ss_pred ccceEEccCCCEEEEEEecccccc----cCCCceEEEEEECCCCceEecccCCCccccccccceEEecCCcEEEEEe
Q 007620 33 INFVSWSPDGKRIAFSVRVDEEDN----VSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (595)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~----~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~~~~~~~~Wspdg~~l~~~~ 105 (595)
.-++.|+|+|. | |+........ ...+.+++|+.+..+|+.+++...+.+ .++..+.|+||++.|++..
T Consensus 478 PDNL~fd~~G~-L-wI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g---aE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGR-L-WILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCC-E-EEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT---CEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCC-E-EEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC---ccCcCeeECCCCCEEEEEE
Confidence 34568999997 4 4443211000 002457899999999999988665543 3677999999999988754
No 358
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=77.35 E-value=1.1 Score=41.67 Aligned_cols=51 Identities=18% Similarity=0.245 Sum_probs=32.2
Q ss_pred EEEEcCCCCCC-CCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCc
Q 007620 497 ATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (595)
Q Consensus 497 g~l~~P~~~~~-~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~ 565 (595)
+.|++|.+... ++ +.|+||++|+. ..... .+....+.|+++||.|+. ++.+
T Consensus 34 ~~~~~p~~~~~~g~--~~p~vv~~HG~--------------~~~~~-~~~~~~~~l~~~G~~v~~-~d~~ 85 (258)
T 2fx5_A 34 CRIYRPRDLGQGGV--RHPVILWGNGT--------------GAGPS-TYAGLLSHWASHGFVVAA-AETS 85 (258)
T ss_dssp EEEEEESSTTGGGC--CEEEEEEECCT--------------TCCGG-GGHHHHHHHHHHTCEEEE-ECCS
T ss_pred EEEEeCCCCcccCC--CceEEEEECCC--------------CCCch-hHHHHHHHHHhCCeEEEE-ecCC
Confidence 88999986322 22 34999997742 11111 111235789999999999 6666
No 359
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=77.08 E-value=2.3 Score=44.83 Aligned_cols=55 Identities=16% Similarity=0.311 Sum_probs=32.4
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhc-cCeEEEe
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLA 560 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~-~GY~Vl~ 560 (595)
+.|.+.|.-| .|.+ .+++ ++|+|||+|+|.|. .|+... .....+.||+ +||+|+.
T Consensus 93 ~edcl~l~v~--~P~~-~~~~--~~Pviv~iHGGg~~--------~g~~~~----~~~~~~~la~~~g~vvv~ 148 (543)
T 2ha2_A 93 SEDCLYLNVW--TPYP-RPAS--PTPVLIWIYGGGFY--------SGAASL----DVYDGRFLAQVEGAVLVS 148 (543)
T ss_dssp ESCCCEEEEE--EESS-CCSS--CEEEEEEECCSTTT--------CCCTTS----GGGCTHHHHHHHCCEEEE
T ss_pred CCcCCeEEEe--ecCC-CCCC--CCeEEEEECCCccc--------cCCCCC----CcCChHHHHhcCCEEEEE
Confidence 5688777655 5765 2223 46999998865332 222110 0112356776 7999998
No 360
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=76.68 E-value=4.8 Score=41.82 Aligned_cols=64 Identities=19% Similarity=0.136 Sum_probs=42.3
Q ss_pred ceEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 481 ~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
..+...++..||.+|+.... + .. |+||++|+ .+..... +....+.|+.+||.|+.
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~---g-----~~--p~vv~~HG--------------~~~~~~~-~~~~~~~l~~~G~~v~~ 290 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVEL---G-----SG--PAVCLCHG--------------FPESWYS-WRYQIPALAQAGYRVLA 290 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEE---C-----SS--SEEEEECC--------------TTCCGGG-GTTHHHHHHHTTCEEEE
T ss_pred ccceeEEEeCCCcEEEEEEc---C-----CC--CEEEEEeC--------------CCCchhH-HHHHHHHHHhCCCEEEE
Confidence 56666777789999986654 1 12 78888764 2221111 12235789999999999
Q ss_pred CCCCceeecC
Q 007620 561 GPSIPIIGEG 570 (595)
Q Consensus 561 ~~~~~~~~~~ 570 (595)
++.|..|.-
T Consensus 291 -~D~~G~G~S 299 (555)
T 3i28_A 291 -MDMKGYGES 299 (555)
T ss_dssp -ECCTTSTTS
T ss_pred -ecCCCCCCC
Confidence 888877753
No 361
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=76.66 E-value=4.4 Score=40.46 Aligned_cols=78 Identities=9% Similarity=0.014 Sum_probs=46.3
Q ss_pred eeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc---eEecccCCC
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFESPD 82 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~---~~~lt~~~~ 82 (595)
.|++.|++ ++...++. ..++..+|||+| ++.... + ..+.+++.++++ .+.|...+.
T Consensus 147 ~L~v~dl~----~~~~~~~~-----~~Vs~v~WSpkG--~~vg~~--------d--g~i~~~~~~~~~~~~k~~I~~Pp~ 205 (388)
T 1xip_A 147 DLSALDLR----TKSTKQLA-----QNVTSFDVTNSQ--LAVLLK--------D--RSFQSFAWRNGEMEKQFEFSLPSE 205 (388)
T ss_dssp EEEEEETT----TCCEEEEE-----ESEEEEEECSSE--EEEEET--------T--SCEEEEEEETTEEEEEEEECCCHH
T ss_pred CEEEEEcc----CCcccccc-----CCceEEEEcCCc--eEEEEc--------C--CcEEEEcCCCccccccceecCCcc
Confidence 57888887 55555543 258899999999 444332 2 334455666666 333411100
Q ss_pred c----cccccccceEEecCCcEEEEE
Q 007620 83 I----CLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 83 ~----~~~~~~~~~~Wspdg~~l~~~ 104 (595)
. ..+..+.++.|.++++.++..
T Consensus 206 ~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 206 LEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp HHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cccccCCCeeEEEEEEecCCeEEEEE
Confidence 0 001246689999999976654
No 362
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=76.43 E-value=59 Score=31.63 Aligned_cols=67 Identities=19% Similarity=0.231 Sum_probs=34.9
Q ss_pred eeeeEECCC---CCeEEEEEcc-cCccccccCcccceeEEEEcCCCc-----eEEEe-ccCCCCccCCccccccccCCCC
Q 007620 177 YTAVEPSPD---QKYVLITSMH-RPYSYKVPCARFSQKVQVWTTDGK-----LVREL-CDLPPAEDIPVCYNSVREGMRS 246 (595)
Q Consensus 177 ~~~~~~SpD---g~~l~~~~~~-~~~~~~~~~~~~~~~l~~~d~~g~-----~~~~l-~~~~~~~~~~~~~~~~~~~~~~ 246 (595)
...++++|| +.+|+++... .... .....|.+++.+++ ..+.+ ...+... ......
T Consensus 75 ~~gia~~pdf~~~g~lyv~~~~~~~~~------~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~---------~h~~~~ 139 (354)
T 3a9g_A 75 LLGLALHPEFPKKSWVYLYASYFAEGG------HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAY---------IHNGGR 139 (354)
T ss_dssp EEEEEECTTTTTSCEEEEEEEEECGGG------CEEEEEEEEEECSSSCCEEEEEEEEEEEECCS---------SCCCCC
T ss_pred eeeEEeCCCCCcCCEEEEEEeccCCCC------CcceEEEEEEECCCCcCcCccEEEEEcCCCCC---------CcCCce
Confidence 457899998 7777766432 1100 00146788876654 12222 2222100 011346
Q ss_pred ceeecCCCeeEEEE
Q 007620 247 ISWRADKPSTLYWV 260 (595)
Q Consensus 247 ~~wspdg~~~l~~~ 260 (595)
+.+.|||. ||+.
T Consensus 140 l~~~pDG~--Lyvt 151 (354)
T 3a9g_A 140 IRFGPDGM--LYIT 151 (354)
T ss_dssp EEECTTSC--EEEE
T ss_pred EEECCCCc--EEEE
Confidence 88999986 6554
No 363
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=75.92 E-value=1.9 Score=45.35 Aligned_cols=32 Identities=25% Similarity=0.652 Sum_probs=21.6
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCc
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDY 524 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~ 524 (595)
+.|.+.+. ++.|.+..+++ ++|+|||+|+|.|
T Consensus 102 sedcl~l~--v~~P~~~~~~~--~~Pviv~iHGGg~ 133 (544)
T 1thg_A 102 NEDCLYLN--VFRPAGTKPDA--KLPVMVWIYGGAF 133 (544)
T ss_dssp CSCCCEEE--EEEETTCCTTC--CEEEEEEECCCTT
T ss_pred CCCCeEEE--EEeCCCCCCCC--CCcEEEEECCCcc
Confidence 56776664 66787755444 4599999886533
No 364
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=75.66 E-value=35 Score=33.38 Aligned_cols=151 Identities=9% Similarity=0.004 Sum_probs=72.3
Q ss_pred cceEEEEcCC---CCeeec--CC--CC----eeeeeEECC--CCC-eEEEEEcccCccccccCcccceeEEEEcCCCceE
Q 007620 156 TAQLVLGSLD---GTAKDF--GT--PA----VYTAVEPSP--DQK-YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (595)
Q Consensus 156 ~~~l~~~d~~---g~~~~l--t~--~~----~~~~~~~Sp--Dg~-~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~ 221 (595)
..+|+++|++ ++.+.| +. .. ....+++.+ ||+ +|+++ ++... ....+++.++..++..
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv-nh~~~-------~s~ielf~~d~~~~~~ 153 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV-NHPGS-------SSTVEVFKFQEEEKSL 153 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE-ECSTT-------CCEEEEEEEETTTTEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE-ECCCC-------CCeEEEEEEECCCCEE
Confidence 5689999984 245544 22 11 223556544 566 45544 44321 1133677778777766
Q ss_pred EEeccCCCCccCCccccccccCCCCceeecCCCeeEEEEEeecCCCcc---c---ccCCcceEEeccCCCCCCCCceecc
Q 007620 222 RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN---V---EVSPRDIIYTQPAEPAEGEKPEILH 295 (595)
Q Consensus 222 ~~l~~~~~~~~~~~~~~~~~~~~~~~~wspdg~~~l~~~~~~d~~~~~---~---~~~~~~~~~~~d~~~~~g~~~~~l~ 295 (595)
..+...... +. ...-+....++|. +|.-...--.+.. . .......+|.++. ++.+.+.
T Consensus 154 ~~~~~~~g~---~~------~~pND~~v~~~G~--fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-----~~~~~~~ 217 (355)
T 3sre_A 154 LHLKTIRHK---LL------PSVNDIVAVGPEH--FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-----NDVRVVA 217 (355)
T ss_dssp EEEEEECCT---TC------SSEEEEEEEETTE--EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-----TCCEEEE
T ss_pred EEEeccccC---CC------CCCceEEEeCCCC--EEecCCcEeCCcccccchhhccCCccEEEEEEC-----CeEEEee
Confidence 665443211 10 0011344455554 3221100000000 0 0012235666562 3444443
Q ss_pred ccCccccceeecCCCcEEEEEEeecccceEEEEEeCCC
Q 007620 296 KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (595)
Q Consensus 296 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~L~~~d~~~ 333 (595)
..-.....++||||++.++... ....+|++++++.
T Consensus 218 ~~l~~pNGia~spDg~~lYvad---t~~~~I~~~~~~~ 252 (355)
T 3sre_A 218 EGFDFANGINISPDGKYVYIAE---LLAHKIHVYEKHA 252 (355)
T ss_dssp EEESSEEEEEECTTSSEEEEEE---GGGTEEEEEEECT
T ss_pred cCCcccCcceECCCCCEEEEEe---CCCCeEEEEEECC
Confidence 3323345689999998766543 2334788888764
No 365
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=74.75 E-value=2.5 Score=44.27 Aligned_cols=31 Identities=13% Similarity=0.282 Sum_probs=20.7
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCC
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPED 523 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~ 523 (595)
+.|.+.+ .++.|.+..+++ ++|+|||+|+|-
T Consensus 82 ~edcl~l--~v~~P~~~~~~~--~~Pviv~iHGGg 112 (522)
T 1ukc_A 82 SEDCLFI--NVFKPSTATSQS--KLPVWLFIQGGG 112 (522)
T ss_dssp ESCCCEE--EEEEETTCCTTC--CEEEEEEECCST
T ss_pred CCcCCEE--EEEECCCCCCCC--CCCEEEEECCCc
Confidence 4566544 667787654444 459999988653
No 366
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=74.72 E-value=1.8 Score=44.97 Aligned_cols=54 Identities=17% Similarity=0.274 Sum_probs=31.1
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccC-eEEEe
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLA 560 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~G-Y~Vl~ 560 (595)
+.|.+. ..++.|.+- . + ++|+|||+|+|.|. .|+...+ ....+.||++| |+|+.
T Consensus 79 ~edcL~--l~v~~P~~~-~-~--~~PviV~iHGGg~~--------~g~~~~~----~~~~~~la~~g~~vvv~ 133 (489)
T 1qe3_A 79 SEDCLY--VNVFAPDTP-S-Q--NLPVMVWIHGGAFY--------LGAGSEP----LYDGSKLAAQGEVIVVT 133 (489)
T ss_dssp CSCCCE--EEEEEECSS-C-C--SEEEEEEECCSTTT--------SCCTTSG----GGCCHHHHHHHTCEEEE
T ss_pred CCCCCE--EEEEeCCCC-C-C--CCCEEEEECCCccc--------cCCCCCc----ccCHHHHHhcCCEEEEe
Confidence 445554 457778752 2 2 35999998865332 1221111 11246788886 99998
No 367
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=74.19 E-value=2 Score=38.76 Aligned_cols=60 Identities=20% Similarity=0.179 Sum_probs=36.0
Q ss_pred EEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCC
Q 007620 485 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 564 (595)
Q Consensus 485 v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~ 564 (595)
+.+...+|. ..+++.|.+ .. |+||++|+.. +....|. ...+.|+++||.|+. ++.
T Consensus 5 ~~~~~~~g~--~~~~~~~~~-----~~--~~vv~~hG~~-----------~~~~~~~----~~~~~l~~~G~~v~~-~d~ 59 (238)
T 1ufo_A 5 TERLTLAGL--SVLARIPEA-----PK--ALLLALHGLQ-----------GSKEHIL----ALLPGYAERGFLLLA-FDA 59 (238)
T ss_dssp EEEEEETTE--EEEEEEESS-----CC--EEEEEECCTT-----------CCHHHHH----HTSTTTGGGTEEEEE-CCC
T ss_pred ecccccCCE--EEEEEecCC-----Cc--cEEEEECCCc-----------ccchHHH----HHHHHHHhCCCEEEE-ecC
Confidence 344445775 445677865 12 8899877420 1111121 123578889999999 888
Q ss_pred ceeec
Q 007620 565 PIIGE 569 (595)
Q Consensus 565 ~~~~~ 569 (595)
|..|.
T Consensus 60 ~g~g~ 64 (238)
T 1ufo_A 60 PRHGE 64 (238)
T ss_dssp TTSTT
T ss_pred CCCcc
Confidence 87664
No 368
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=73.78 E-value=1.9 Score=41.35 Aligned_cols=55 Identities=16% Similarity=0.195 Sum_probs=34.2
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCce
Q 007620 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 490 ~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~ 566 (595)
.+|.. .+.+++|.+.. +.|+||++|+.. +....| ....+.|+++||.|+. ++.+.
T Consensus 79 ~~g~~-~~~~~~p~~~~-----~~p~vv~~HG~~-----------~~~~~~----~~~~~~la~~G~~vv~-~d~~g 133 (306)
T 3vis_A 79 ADGFG-GGTIYYPRENN-----TYGAIAISPGYT-----------GTQSSI----AWLGERIASHGFVVIA-IDTNT 133 (306)
T ss_dssp CSSSC-CEEEEEESSCS-----CEEEEEEECCTT-----------CCHHHH----HHHHHHHHTTTEEEEE-ECCSS
T ss_pred cCCCc-ceEEEeeCCCC-----CCCEEEEeCCCc-----------CCHHHH----HHHHHHHHhCCCEEEE-ecCCC
Confidence 56655 46888887633 339999977420 110111 1235789999999999 65554
No 369
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=73.68 E-value=5.2 Score=37.00 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=36.4
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCc
Q 007620 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (595)
Q Consensus 486 ~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~ 565 (595)
+|+..||.+|+...+ + . . |.||++| |.+.... .+....+.|+++||.|+. +|.|
T Consensus 2 ~~~~~~g~~l~y~~~---G--~---g--~~vvllH--------------G~~~~~~-~w~~~~~~l~~~g~~vi~-~D~~ 55 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDW---G--S---G--KPVLFSH--------------GWLLDAD-MWEYQMEYLSSRGYRTIA-FDRR 55 (271)
T ss_dssp EEECTTSCEEEEEEE---S--S---S--SEEEEEC--------------CTTCCGG-GGHHHHHHHHTTTCEEEE-ECCT
T ss_pred eEEcCCCCEEEEEcc---C--C---C--CeEEEEC--------------CCCCcHH-HHHHHHHHHHhCCceEEE-ecCC
Confidence 467889999987654 2 1 1 4466655 3222111 111124678899999999 9998
Q ss_pred eeecC
Q 007620 566 IIGEG 570 (595)
Q Consensus 566 ~~~~~ 570 (595)
..|.-
T Consensus 56 G~G~S 60 (271)
T 3ia2_A 56 GFGRS 60 (271)
T ss_dssp TSTTS
T ss_pred CCccC
Confidence 87753
No 370
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=73.48 E-value=2.8 Score=43.61 Aligned_cols=54 Identities=24% Similarity=0.378 Sum_probs=32.5
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccC-eEEEe
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLA 560 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~G-Y~Vl~ 560 (595)
+.|++.+.- +.|.. .++ ++|+|||+|++.|. .|+.... ....+.||++| ++|+.
T Consensus 81 ~edcl~l~v--~~P~~--~~~--~~Pviv~iHGGg~~--------~g~~~~~----~~~~~~la~~~~~vvv~ 135 (498)
T 2ogt_A 81 SEDGLYLNI--WSPAA--DGK--KRPVLFWIHGGAFL--------FGSGSSP----WYDGTAFAKHGDVVVVT 135 (498)
T ss_dssp BSCCCEEEE--EESCS--SSC--CEEEEEEECCSTTT--------SCCTTCG----GGCCHHHHHHHTCEEEE
T ss_pred CCCCcEEEE--EecCC--CCC--CCcEEEEEcCCccC--------CCCCCCC----cCCHHHHHhCCCEEEEe
Confidence 568877765 46762 323 45999998865332 2222111 11246888887 99998
No 371
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=72.73 E-value=6.7 Score=36.29 Aligned_cols=60 Identities=22% Similarity=0.261 Sum_probs=37.6
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCce
Q 007620 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 487 ~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~ 566 (595)
++..||.+|+....-|. +. |.||++| |.+..... +....+.|+.+||.|+. +|.|.
T Consensus 3 ~~~~~g~~l~y~~~g~~------~~--~~vvllH--------------G~~~~~~~-w~~~~~~l~~~g~~vi~-~D~~G 58 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPR------DG--LPVVFHH--------------GWPLSADD-WDNQMLFFLSHGYRVIA-HDRRG 58 (275)
T ss_dssp EECTTSCEEEEEEESCT------TS--CEEEEEC--------------CTTCCGGG-GHHHHHHHHHTTCEEEE-ECCTT
T ss_pred EEccCCCEEEEEEcCCC------CC--ceEEEEC--------------CCCCchhh-HHHHHHHHHHCCceEEE-EcCCc
Confidence 56789999987666432 12 5667655 32221111 11224688999999999 88888
Q ss_pred eecC
Q 007620 567 IGEG 570 (595)
Q Consensus 567 ~~~~ 570 (595)
.|.-
T Consensus 59 ~G~S 62 (275)
T 1a88_A 59 HGRS 62 (275)
T ss_dssp STTS
T ss_pred CCCC
Confidence 7753
No 372
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=72.59 E-value=73 Score=30.94 Aligned_cols=78 Identities=18% Similarity=0.244 Sum_probs=35.9
Q ss_pred CCceeecCCCeeEEEEEeecCCCccc---ccCCcceEEeccCCCCCCCCc-------eeccccCc-cccceeecCCCcEE
Q 007620 245 RSISWRADKPSTLYWVEAQDRGDANV---EVSPRDIIYTQPAEPAEGEKP-------EILHKLDL-RFRSVSWCDDSLAL 313 (595)
Q Consensus 245 ~~~~wspdg~~~l~~~~~~d~~~~~~---~~~~~~~~~~~d~~~~~g~~~-------~~l~~~~~-~~~~~~wspDg~~l 313 (595)
..+.|.|||. ||+. .-+.++... .......|+.++. +|.-+ ..+..... ....++|.|+|..+
T Consensus 143 ~~l~fgpDG~--Lyvt-~Gd~~~~~~~qd~~~~~G~IlRi~~---dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~ 216 (347)
T 3das_A 143 GRIAFGPDKM--LYAG-TGESGDTGLSQDRKSLGGKILRMTP---DGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLF 216 (347)
T ss_dssp CCEEECTTSC--EEEE-CBCTTCGGGTTCTTCSTTCEEEECT---TSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEE
T ss_pred ccccCCCCCC--EEEE-ECCCCCCccccCCCCCCCEEEEEeC---CCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEE
Confidence 4688999986 6553 222222110 0122456666664 43210 11221111 23456788877655
Q ss_pred EEEEeecccceEEEEE
Q 007620 314 VNETWYKTSQTRTWLV 329 (595)
Q Consensus 314 ~~~~~~~~~~~~L~~~ 329 (595)
+.+. ......+|.++
T Consensus 217 ~~d~-g~~~~deln~i 231 (347)
T 3das_A 217 ASEF-GQDTWDELNAI 231 (347)
T ss_dssp EEEC-CSSSCEEEEEE
T ss_pred EEec-CCCCCceeeEE
Confidence 5543 11222355555
No 373
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=72.31 E-value=2.6 Score=41.14 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=31.0
Q ss_pred ceEEEEEECC-CCcEEEEEEEcCCCCCC-CCCCCCcEEEEec
Q 007620 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQ-SKDGPLPCLFWAY 520 (595)
Q Consensus 481 ~~e~v~~~~~-DG~~i~g~l~~P~~~~~-~k~y~lP~vv~~y 520 (595)
+.+.+++.+. -|.+...+|++|++|++ .++| |||++.|
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y~~~~~~y--PVlylld 50 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGYAQSLEAY--PVVYLLD 50 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTGGGSCCCE--EEEEESS
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCCCCCCCCc--cEEEEec
Confidence 5677788776 58899999999999986 5666 9998865
No 374
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=71.53 E-value=7.4 Score=36.09 Aligned_cols=60 Identities=27% Similarity=0.341 Sum_probs=37.6
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCce
Q 007620 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 487 ~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~ 566 (595)
++..||.+|+....-|. +. |.||++| |.+..... +....+.|+++||.|+. +|.|.
T Consensus 4 ~~~~~g~~l~y~~~g~~------~~--~~vvllH--------------G~~~~~~~-w~~~~~~L~~~g~~vi~-~D~~G 59 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPR------DA--PVIHFHH--------------GWPLSADD-WDAQLLFFLAHGYRVVA-HDRRG 59 (276)
T ss_dssp EECTTSCEEEEEEESCT------TS--CEEEEEC--------------CTTCCGGG-GHHHHHHHHHTTCEEEE-ECCTT
T ss_pred EECCCCcEEEEEecCCC------CC--CeEEEEC--------------CCCcchhH-HHHHHHHHHhCCCEEEE-ecCCC
Confidence 56789999987766432 12 5677765 32221110 11124688999999999 88888
Q ss_pred eecC
Q 007620 567 IGEG 570 (595)
Q Consensus 567 ~~~~ 570 (595)
.|.-
T Consensus 60 ~G~S 63 (276)
T 1zoi_A 60 HGRS 63 (276)
T ss_dssp STTS
T ss_pred CCCC
Confidence 8753
No 375
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=71.44 E-value=6.9 Score=30.82 Aligned_cols=70 Identities=9% Similarity=0.067 Sum_probs=42.5
Q ss_pred EEEEEecCCCcceEEEEeCCC---CceeeEecCCCC-CCCcC--CC-ceEEEEEECCCCcEEEEEEEcCCCCCCCCCC
Q 007620 441 ILTSKESKTEITQYHILSWPL---KKSSQITNFPHP-YPTLA--SL-QKEMIKYQRKDGVPLTATLYLPPGYDQSKDG 511 (595)
Q Consensus 441 l~~~~~s~~~p~~l~~~d~~~---~~~~~Lt~~~~~-~~~~~--~~-~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y 511 (595)
+++.........++..+++.. ..+..++.. .. |.... .+ -|=.|++++.||..+-..=+.|.++++|+.|
T Consensus 28 l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~GplSfRvtts~G~~~va~nViPa~W~~Gqty 104 (108)
T 2jnz_A 28 LVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVGPFNFRFMSKGGMRNVFDEVIPTAFSIGKTY 104 (108)
T ss_dssp EEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCSSEEEEEEETTTEEEEEEEEECSSCCTTCEE
T ss_pred EEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCCCEEEEEEEcCCcEEEECeEECCCCCCCCEE
Confidence 333333344445555555542 234555443 22 21111 23 4667888999999999999999999998766
No 376
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=70.51 E-value=5.3 Score=36.73 Aligned_cols=58 Identities=16% Similarity=0.129 Sum_probs=38.0
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceee
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~ 568 (595)
..||.+|....+-|.+ . |+||++|+. +.... .+....+.|+.+||.|+. ++.|..|
T Consensus 10 ~~~g~~l~~~~~g~~~------~--~~vv~~hG~--------------~~~~~-~~~~~~~~l~~~G~~v~~-~d~~G~G 65 (286)
T 3qit_A 10 EFGGNQICLCSWGSPE------H--PVVLCIHGI--------------LEQGL-AWQEVALPLAAQGYRVVA-PDLFGHG 65 (286)
T ss_dssp EETTEEEEEEEESCTT------S--CEEEEECCT--------------TCCGG-GGHHHHHHHHHTTCEEEE-ECCTTST
T ss_pred ecCCceEEEeecCCCC------C--CEEEEECCC--------------Ccccc-hHHHHHHHhhhcCeEEEE-ECCCCCC
Confidence 3589999999885432 2 778887642 11111 111235789999999999 8888777
Q ss_pred cC
Q 007620 569 EG 570 (595)
Q Consensus 569 ~~ 570 (595)
.-
T Consensus 66 ~s 67 (286)
T 3qit_A 66 RS 67 (286)
T ss_dssp TS
T ss_pred CC
Confidence 53
No 377
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=70.37 E-value=7.7 Score=37.82 Aligned_cols=61 Identities=16% Similarity=0.197 Sum_probs=38.9
Q ss_pred ECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCcee
Q 007620 488 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 567 (595)
Q Consensus 488 ~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~ 567 (595)
...||.+|+.+..-|.+ +.. |+||++|+. +.....+ ....+.|+++||.|+. ++.|..
T Consensus 8 ~~~~g~~l~y~~~G~~~----~~~--~~vv~~hG~--------------~~~~~~~-~~~~~~l~~~g~~vi~-~d~~g~ 65 (356)
T 2e3j_A 8 LNCRGTRIHAVADSPPD----QQG--PLVVLLHGF--------------PESWYSW-RHQIPALAGAGYRVVA-IDQRGY 65 (356)
T ss_dssp EEETTEEEEEEEECCTT----CCS--CEEEEECCT--------------TCCGGGG-TTTHHHHHHTTCEEEE-ECCTTS
T ss_pred EccCCeEEEEEEecCCC----CCC--CEEEEECCC--------------CCcHHHH-HHHHHHHHHcCCEEEE-EcCCCC
Confidence 34589999998886653 123 778887642 2111111 1235688889999999 888877
Q ss_pred ecC
Q 007620 568 GEG 570 (595)
Q Consensus 568 ~~~ 570 (595)
|.-
T Consensus 66 g~s 68 (356)
T 2e3j_A 66 GRS 68 (356)
T ss_dssp TTS
T ss_pred CCC
Confidence 653
No 378
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=69.99 E-value=81 Score=30.39 Aligned_cols=63 Identities=10% Similarity=-0.056 Sum_probs=40.2
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc----cccccccceEE---ecCCcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI----CLNAVFGSFVW---VNNSTLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~----~~~~~~~~~~W---spdg~~l~~~ 104 (595)
...+++|.+...+++|..- ....|.+++++++....+ ..+.. .-....+.+.| .|+|++++++
T Consensus 14 yPE~~~wd~~~g~~~vs~l---------~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~ 83 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNL---------YKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVM 83 (334)
T ss_dssp CCSCEEEETTTTEEEEEET---------TTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEE
T ss_pred CCcCccCcCCCCEEEEEec---------cCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEE
Confidence 4668999998777766553 357899999987765544 22221 00112358899 5887776654
No 379
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=69.31 E-value=1.5 Score=42.48 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=24.0
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccC
Q 007620 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPE 522 (595)
Q Consensus 490 ~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~ 522 (595)
..|....++||.|.+..+++. +.|+||..|+-
T Consensus 199 ~~~~~~~~~~yvP~~~~~~~~-~~~l~v~lHGc 230 (318)
T 2d81_A 199 ANGMDTTGYLYVPQSCASGAT-VCSLHVALHGC 230 (318)
T ss_dssp CTTBCSEEEEEECHHHHSSSS-CEEEEEEECCT
T ss_pred CCCCCcceEEEecCCCCCCCC-CCCEEEEecCC
Confidence 467778899999999876542 15899998853
No 380
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=69.08 E-value=2.2 Score=41.41 Aligned_cols=22 Identities=0% Similarity=-0.165 Sum_probs=15.6
Q ss_pred EEEEEEcCCCCCCCCCCCCcEEEEeccC
Q 007620 495 LTATLYLPPGYDQSKDGPLPCLFWAYPE 522 (595)
Q Consensus 495 i~g~l~~P~~~~~~k~y~lP~vv~~y~~ 522 (595)
+..+++.|.+ . +.|+||++|++
T Consensus 84 ~~~~~~~p~~-~-----~~p~vv~lHGg 105 (326)
T 3d7r_A 84 MQVFRFNFRH-Q-----IDKKILYIHGG 105 (326)
T ss_dssp EEEEEEESTT-C-----CSSEEEEECCS
T ss_pred EEEEEEeeCC-C-----CCeEEEEECCC
Confidence 6778888875 2 23999997753
No 381
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=68.60 E-value=6.8 Score=40.04 Aligned_cols=63 Identities=13% Similarity=0.056 Sum_probs=40.3
Q ss_pred EEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCC
Q 007620 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (595)
Q Consensus 483 e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~ 562 (595)
..+.+.+.||.+|+.... + .. |+||++|+. +.....+ ....+.|+++||.|+. +
T Consensus 4 i~~~~~~~dG~~l~y~~~---G-----~g--p~VV~lHG~--------------~~~~~~~-~~l~~~La~~Gy~Vi~-~ 57 (456)
T 3vdx_A 4 ITVGQENSTSIDLYYEDH---G-----TG--VPVVLIHGF--------------PLSGHSW-ERQSAALLDAGYRVIT-Y 57 (456)
T ss_dssp EEEEEETTEEEEEEEEEE---S-----SS--EEEEEECCT--------------TCCGGGG-TTHHHHHHHHTEEEEE-E
T ss_pred EeecccccCCeEEEEEEe---C-----CC--CEEEEECCC--------------CCcHHHH-HHHHHHHHHCCcEEEE-E
Confidence 446677889999885433 1 12 788887642 2111111 1235789999999999 8
Q ss_pred CCceeecCC
Q 007620 563 SIPIIGEGD 571 (595)
Q Consensus 563 ~~~~~~~~~ 571 (595)
|.|..|.-+
T Consensus 58 D~rG~G~S~ 66 (456)
T 3vdx_A 58 DRRGFGQSS 66 (456)
T ss_dssp CCTTSTTSC
T ss_pred CCCCCCCCC
Confidence 888877533
No 382
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=68.32 E-value=5.7 Score=37.47 Aligned_cols=58 Identities=14% Similarity=0.072 Sum_probs=35.0
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceee
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~ 568 (595)
..||.+|+....=|. .. |.||++|+ .+.....+.......|+++||.|+. +|.|..|
T Consensus 7 ~~~g~~l~y~~~G~~------~~--~~vvllHG--------------~~~~~~~w~~~~~~~L~~~G~~vi~-~D~rG~G 63 (298)
T 1q0r_A 7 PSGDVELWSDDFGDP------AD--PALLLVMG--------------GNLSALGWPDEFARRLADGGLHVIR-YDHRDTG 63 (298)
T ss_dssp EETTEEEEEEEESCT------TS--CEEEEECC--------------TTCCGGGSCHHHHHHHHTTTCEEEE-ECCTTST
T ss_pred ccCCeEEEEEeccCC------CC--CeEEEEcC--------------CCCCccchHHHHHHHHHhCCCEEEe-eCCCCCC
Confidence 358999987765331 12 56777653 2221111111112678999999999 8888877
Q ss_pred c
Q 007620 569 E 569 (595)
Q Consensus 569 ~ 569 (595)
.
T Consensus 64 ~ 64 (298)
T 1q0r_A 64 R 64 (298)
T ss_dssp T
T ss_pred C
Confidence 5
No 383
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=67.42 E-value=8.3 Score=40.40 Aligned_cols=54 Identities=15% Similarity=0.293 Sum_probs=32.3
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHh-ccCeEEEe
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLA 560 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la-~~GY~Vl~ 560 (595)
+.|.+.|.- +.|.+.. + ++|+|||+|+|.|. .|+.... ....+.|| .+|++|+.
T Consensus 91 sedcl~lnv--~~P~~~~--~--~~Pv~v~iHGG~~~--------~g~~~~~----~~~~~~la~~~~~vvv~ 145 (537)
T 1ea5_A 91 SEDCLYLNI--WVPSPRP--K--STTVMVWIYGGGFY--------SGSSTLD----VYNGKYLAYTEEVVLVS 145 (537)
T ss_dssp CSCCCEEEE--EECSSCC--S--SEEEEEEECCSTTT--------CCCTTCG----GGCTHHHHHHHTCEEEE
T ss_pred CCcCCeEEE--eccCCCC--C--CCeEEEEECCCccc--------CCCCCCC----ccChHHHHhcCCEEEEE
Confidence 568877754 4676532 3 45999998865432 2222110 01235666 78999998
No 384
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=67.41 E-value=4.7 Score=42.23 Aligned_cols=54 Identities=19% Similarity=0.396 Sum_probs=31.8
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhc-cCeEEEe
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLA 560 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~-~GY~Vl~ 560 (595)
+.|.+.+. ++.|.... + ++|+|||+|+|-|. .|+... .....+.||+ +|++|+.
T Consensus 89 ~edcl~ln--v~~P~~~~--~--~~Pv~v~iHGGg~~--------~g~~~~----~~~~~~~la~~~~~vvv~ 143 (529)
T 1p0i_A 89 SEDCLYLN--VWIPAPKP--K--NATVLIWIYGGGFQ--------TGTSSL----HVYDGKFLARVERVIVVS 143 (529)
T ss_dssp CSCCCEEE--EEEESSCC--S--SEEEEEEECCSTTT--------SCCTTC----GGGCTHHHHHHHCCEEEE
T ss_pred CCcCCeEE--EeeCCCCC--C--CCeEEEEECCCccc--------cCCCCc----cccChHHHhccCCeEEEE
Confidence 56777665 55676532 2 45999998865332 222111 0112356776 7999998
No 385
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=67.23 E-value=1e+02 Score=32.22 Aligned_cols=57 Identities=18% Similarity=0.057 Sum_probs=34.1
Q ss_pred eeEEEecCCCCCCCCceeeecCCCC-----CcccceEEc---cCCC--EEEEEEecccccccCCCceEEEEEECCCCceE
Q 007620 6 GIGIHRLLPDDSLGPEKEVHGYPDG-----AKINFVSWS---PDGK--RIAFSVRVDEEDNVSSCKLRVWIADAETGEAK 75 (595)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~lt~~~~~-----~~~~~~~~S---PDG~--~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~ 75 (595)
.|+-+|.. +|+.+.-.++... .....|.+. +||+ ++++... ....||++|.++|+..
T Consensus 273 ~v~Ald~~----tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~---------~~G~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 273 TIWGRDLD----TGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHID---------RNGILYTLNRENGNLI 339 (571)
T ss_dssp EEEEEETT----TCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEEC---------TTSEEEEEETTTCCEE
T ss_pred EEEEEecC----CCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeC---------CCcEEEEEECCCCCEE
Confidence 47788887 7777544333211 023456554 4786 4445443 2458999999888753
No 386
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=65.49 E-value=12 Score=29.00 Aligned_cols=72 Identities=10% Similarity=0.080 Sum_probs=44.8
Q ss_pred EEEEEEecCCCcceEEEEeCCC---CceeeEecCCCCCCCcC--CC-ceEEEEEECCCCcEEEEEEEcCCCCCCCCCC
Q 007620 440 KILTSKESKTEITQYHILSWPL---KKSSQITNFPHPYPTLA--SL-QKEMIKYQRKDGVPLTATLYLPPGYDQSKDG 511 (595)
Q Consensus 440 ~l~~~~~s~~~p~~l~~~d~~~---~~~~~Lt~~~~~~~~~~--~~-~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y 511 (595)
++++.........++..+++.. +.+..++.....+.... .+ -|=.|++++.||..+-..=+.|.++++|+.|
T Consensus 16 ~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~rwGa~W~~~s~~~l~GplSfRvt~~~G~~~v~~nViPa~W~~G~ty 93 (100)
T 3ft1_A 16 KLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKKGNVWEVKSSKPLVGPFNFRFMSKGGMRNVFDEVIPTAFSIGKTY 93 (100)
T ss_dssp EEEEEEEEECTTCCEEEEEEECTTCCCCEECEEETTEEEEECSSCCCSSEEEEEEETTCCEEEEEEEECTTCCTTCEE
T ss_pred eEEEEEEEcCCCccEEEEEEEeCCCCCeEEecccCCEeEeCCCCCCCCCEEEEEEEcCCcEEEECeEeCCCCCCCcEE
Confidence 4445555555566666665542 23444444211121111 23 4667888889999999999999999998765
No 387
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=65.03 E-value=4.4 Score=39.08 Aligned_cols=12 Identities=0% Similarity=-0.025 Sum_probs=9.3
Q ss_pred HHHhcc-CeEEEe
Q 007620 549 LIFLAR-RFAVLA 560 (595)
Q Consensus 549 q~la~~-GY~Vl~ 560 (595)
..||++ ||+|+.
T Consensus 104 ~~la~~~g~~v~~ 116 (322)
T 3k6k_A 104 TQLAKQSSATLWS 116 (322)
T ss_dssp HHHHHHHTCEEEE
T ss_pred HHHHHhcCCEEEE
Confidence 566654 999998
No 388
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=64.81 E-value=11 Score=34.58 Aligned_cols=57 Identities=18% Similarity=0.332 Sum_probs=35.6
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCce
Q 007620 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 487 ~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~ 566 (595)
++..||.+|+.... + .. |.||++| |.+.....+ ....+.|+++||.|+. +|.|.
T Consensus 3 ~~~~~g~~l~y~~~---g-----~~--~~vvllH--------------G~~~~~~~~-~~~~~~L~~~g~~vi~-~D~~G 56 (273)
T 1a8s_A 3 FTTRDGTQIYYKDW---G-----SG--QPIVFSH--------------GWPLNADSW-ESQMIFLAAQGYRVIA-HDRRG 56 (273)
T ss_dssp EECTTSCEEEEEEE---S-----CS--SEEEEEC--------------CTTCCGGGG-HHHHHHHHHTTCEEEE-ECCTT
T ss_pred EecCCCcEEEEEEc---C-----CC--CEEEEEC--------------CCCCcHHHH-hhHHhhHhhCCcEEEE-ECCCC
Confidence 56789998875543 2 12 5677765 322211111 1224688999999999 88888
Q ss_pred eec
Q 007620 567 IGE 569 (595)
Q Consensus 567 ~~~ 569 (595)
.|.
T Consensus 57 ~G~ 59 (273)
T 1a8s_A 57 HGR 59 (273)
T ss_dssp STT
T ss_pred CCC
Confidence 775
No 389
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=64.60 E-value=2.9 Score=41.50 Aligned_cols=66 Identities=14% Similarity=0.109 Sum_probs=41.5
Q ss_pred EEEECCCCcEEEEEEEcCCC---CCCCCCCCCcEEEEeccCCccCcccCCcccCCCC-cccCCCCchhHHHh----ccCe
Q 007620 485 IKYQRKDGVPLTATLYLPPG---YDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN-EFSGMTPTSSLIFL----ARRF 556 (595)
Q Consensus 485 v~~~~~DG~~i~g~l~~P~~---~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~-~~~~~~~~~~q~la----~~GY 556 (595)
.++...||.+|+++.+.|.+ ..+.. +.|+||++|+- ++.. .|. ...+.|+ ..||
T Consensus 23 ~~~~~~dg~~l~~~~~g~~~~~~~~~~~--~~~~vvllHG~------------~~~~~~~~----~~~~~L~~~~~~~G~ 84 (398)
T 2y6u_A 23 STLCATDRLELTYDVYTSAERQRRSRTA--TRLNLVFLHGS------------GMSKVVWE----YYLPRLVAADAEGNY 84 (398)
T ss_dssp SBSSTTCCCEEEEEEEEESCTTTCCTTC--EEEEEEEECCT------------TCCGGGGG----GGGGGSCCCBTTTTE
T ss_pred ccccCCCceEEEEEEEecCCCCCCCCCC--CCCeEEEEcCC------------CCcHHHHH----HHHHHHHHhhhhcCc
Confidence 35667899999999998865 22222 33888887642 1111 111 2245677 3499
Q ss_pred ---EEEeCCCCceeec
Q 007620 557 ---AVLAGPSIPIIGE 569 (595)
Q Consensus 557 ---~Vl~~~~~~~~~~ 569 (595)
.|+. +|.+..|.
T Consensus 85 ~~~~vi~-~D~~G~G~ 99 (398)
T 2y6u_A 85 AIDKVLL-IDQVNHGD 99 (398)
T ss_dssp EEEEEEE-ECCTTSHH
T ss_pred ceeEEEE-EcCCCCCC
Confidence 9998 88887664
No 390
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=63.40 E-value=3.4 Score=37.35 Aligned_cols=22 Identities=14% Similarity=0.170 Sum_probs=17.9
Q ss_pred hhHHHhccCeEEEeCCCCceeec
Q 007620 547 SSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 547 ~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
..+.|+++||.|+. ++.|..|.
T Consensus 41 ~~~~l~~~G~~v~~-~d~~g~g~ 62 (251)
T 3dkr_A 41 MARALQRSGYGVYV-PLFSGHGT 62 (251)
T ss_dssp HHHHHHHTTCEEEE-CCCTTCSS
T ss_pred HHHHHHHCCCEEEe-cCCCCCCC
Confidence 35789999999999 88877664
No 391
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=62.21 E-value=4 Score=43.02 Aligned_cols=36 Identities=17% Similarity=0.309 Sum_probs=22.8
Q ss_pred CcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEe
Q 007620 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (595)
Q Consensus 513 lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~ 560 (595)
+|+|||+|+|.|. .|+... .....+.|+++|++|+.
T Consensus 115 ~Pviv~iHGGg~~--------~g~~~~----~~~~~~~l~~~g~vvv~ 150 (551)
T 2fj0_A 115 LPVLVFIHGGGFA--------FGSGDS----DLHGPEYLVSKDVIVIT 150 (551)
T ss_dssp EEEEEEECCSTTT--------SCCSCT----TTCBCTTGGGGSCEEEE
T ss_pred CCEEEEEcCCccc--------cCCCcc----cccCHHHHHhCCeEEEE
Confidence 6999999875432 222211 01123678899999998
No 392
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=62.13 E-value=8.1 Score=38.52 Aligned_cols=61 Identities=18% Similarity=0.195 Sum_probs=38.6
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhcc---------CeEEE
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR---------RFAVL 559 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~---------GY~Vl 559 (595)
..||.+|+.+...|.+ + .. |.||++| |.|.....+ ......|+.. ||.|+
T Consensus 74 ~i~g~~i~~~~~~~~~--~--~~--~plll~H--------------G~~~s~~~~-~~~~~~L~~~~~~~~~~~~~~~vi 132 (388)
T 4i19_A 74 EIDGATIHFLHVRSPE--P--DA--TPMVITH--------------GWPGTPVEF-LDIIGPLTDPRAHGGDPADAFHLV 132 (388)
T ss_dssp EETTEEEEEEEECCSS--T--TC--EEEEEEC--------------CTTCCGGGG-HHHHHHHHCGGGGTSCGGGCEEEE
T ss_pred EECCeEEEEEEccCCC--C--CC--CeEEEEC--------------CCCCCHHHH-HHHHHHHhCcccccCCCCCCeEEE
Confidence 3599999988887653 1 12 5667654 433322211 1224577776 99999
Q ss_pred eCCCCceeecCC
Q 007620 560 AGPSIPIIGEGD 571 (595)
Q Consensus 560 ~~~~~~~~~~~~ 571 (595)
. +|+|..|.-+
T Consensus 133 ~-~dl~G~G~S~ 143 (388)
T 4i19_A 133 I-PSLPGFGLSG 143 (388)
T ss_dssp E-ECCTTSGGGC
T ss_pred E-EcCCCCCCCC
Confidence 9 9999988633
No 393
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=61.59 E-value=1e+02 Score=29.81 Aligned_cols=67 Identities=12% Similarity=-0.024 Sum_probs=37.1
Q ss_pred cccceEEccC---CCEEEEEEecccccccCCCceEEEEEECCCCc---eEec-ccCC--CccccccccceEEecCCcEEE
Q 007620 32 KINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPL-FESP--DICLNAVFGSFVWVNNSTLLI 102 (595)
Q Consensus 32 ~~~~~~~SPD---G~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~---~~~l-t~~~--~~~~~~~~~~~~Wspdg~~l~ 102 (595)
......++|| +.+|++....... .....|++++++++. .+.+ +..+ ... ......+.|.|||. |+
T Consensus 76 ~p~gia~~pdf~~~g~lYv~~~~~~~----~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~-~h~~~~l~~~pdG~-Ly 149 (352)
T 2ism_A 76 GLLGLALHPRFPQEPYVYAYRTVAEG----GLRNQVVRLRHLGERGVLDRVVLDGIPARPHG-LHSGGRIAFGPDGM-LY 149 (352)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEECTT----SSEEEEEEEEECSSCEEEEEEEEEEECCCTTC-CCCCCCEEECTTSC-EE
T ss_pred CceeEEECCCCCCCCEEEEEEecCCC----CCccEEEEEEeCCCCcCceEEEEEeCCCCCCC-CcCCceEEECCCCC-EE
Confidence 4567799999 6666554432100 012679999887652 2222 2122 111 01235899999994 66
Q ss_pred EE
Q 007620 103 FT 104 (595)
Q Consensus 103 ~~ 104 (595)
++
T Consensus 150 v~ 151 (352)
T 2ism_A 150 VT 151 (352)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 394
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=60.98 E-value=11 Score=34.97 Aligned_cols=65 Identities=17% Similarity=0.179 Sum_probs=39.8
Q ss_pred eEEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeC
Q 007620 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (595)
Q Consensus 482 ~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~ 561 (595)
.+...+...||.+|+...+-+.+ + . |.||++| |.+.....+ ......|++ ||.|+.
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~--~---~--~~vvllH--------------G~~~~~~~~-~~~~~~L~~-~~~vi~- 60 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDI--S---R--PPVLCLP--------------GLTRNARDF-EDLATRLAG-DWRVLC- 60 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCT--T---S--CCEEEEC--------------CTTCCGGGG-HHHHHHHBB-TBCEEE-
T ss_pred cccCeeecCCCceEEEEEcCCCC--C---C--CcEEEEC--------------CCCcchhhH-HHHHHHhhc-CCEEEe-
Confidence 45667888899999998874432 1 1 5566655 322211111 112346655 999999
Q ss_pred CCCceeecC
Q 007620 562 PSIPIIGEG 570 (595)
Q Consensus 562 ~~~~~~~~~ 570 (595)
+|.|..|.-
T Consensus 61 ~Dl~G~G~S 69 (285)
T 3bwx_A 61 PEMRGRGDS 69 (285)
T ss_dssp ECCTTBTTS
T ss_pred ecCCCCCCC
Confidence 999988753
No 395
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=60.11 E-value=4.6 Score=42.81 Aligned_cols=34 Identities=29% Similarity=0.737 Sum_probs=22.1
Q ss_pred EECCCCcEEEEEEEcCCCCC-CCCCCCCcEEEEeccCCc
Q 007620 487 YQRKDGVPLTATLYLPPGYD-QSKDGPLPCLFWAYPEDY 524 (595)
Q Consensus 487 ~~~~DG~~i~g~l~~P~~~~-~~k~y~lP~vv~~y~~~~ 524 (595)
+.+.|.+.|. ++.|.+.. .++ ++|+|||+|+|-|
T Consensus 75 ~~sedcl~ln--v~~P~~~~~~~~--~~PV~v~iHGGg~ 109 (579)
T 2bce_A 75 YGNEDCLYLN--IWVPQGRKEVSH--DLPVMIWIYGGAF 109 (579)
T ss_dssp ESCSCCCEEE--EEEEECSSSCCC--SEEEEEECCCCSE
T ss_pred CCCCCCCEEE--EEECCCCCCCCC--CCeEEEEECCCcc
Confidence 4466777765 56687643 233 4599999887643
No 396
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=59.09 E-value=1.5 Score=42.64 Aligned_cols=60 Identities=10% Similarity=-0.122 Sum_probs=35.6
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccC-CCCchhHHHhccCeEEEeCCCCceee
Q 007620 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSG-MTPTSSLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 491 DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~-~~~~~~q~la~~GY~Vl~~~~~~~~~ 568 (595)
++..+.+.|+.|.++..+.+ +.||++|+ ....... +.....+.|+++||.|+. ++.|..|
T Consensus 12 ~~~~l~~~i~~p~~~~~~~~---~~VvllHG--------------~~~~~~~~~~~~l~~~L~~~G~~v~~-~d~~g~g 72 (317)
T 1tca_A 12 PKSVLDAGLTCQGASPSSVS---KPILLVPG--------------TGTTGPQSFDSNWIPLSTQLGYTPCW-ISPPPFM 72 (317)
T ss_dssp CHHHHHHTEEETTBCTTSCS---SEEEEECC--------------TTCCHHHHHTTTHHHHHHTTTCEEEE-ECCTTTT
T ss_pred CHHHHhheeeCCCCCCCCCC---CeEEEECC--------------CCCCcchhhHHHHHHHHHhCCCEEEE-ECCCCCC
Confidence 45567778889988764432 44666553 2111000 111234788999999998 7766554
No 397
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=58.80 E-value=5.9 Score=38.34 Aligned_cols=22 Identities=14% Similarity=0.132 Sum_probs=17.8
Q ss_pred hhHHHhccCeEEEeCCCCceeec
Q 007620 547 SSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 547 ~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
..+.|+++||.|+. +|.+..|.
T Consensus 88 ~~~~l~~~G~~V~~-~D~~G~G~ 109 (328)
T 1qlw_A 88 WDEYFLRKGYSTYV-IDQSGRGR 109 (328)
T ss_dssp HHHHHHHTTCCEEE-EECTTSTT
T ss_pred HHHHHHHCCCeEEE-ECCCCccc
Confidence 46799999999999 77776654
No 398
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=57.67 E-value=12 Score=35.14 Aligned_cols=64 Identities=22% Similarity=0.189 Sum_probs=37.8
Q ss_pred EEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCC
Q 007620 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (595)
Q Consensus 483 e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~ 562 (595)
+...+...||.+|+....-|. .. |.||++| |.+......+....+.| ++||.|+. +
T Consensus 3 ~~~~~~~~~g~~l~~~~~G~~------~~--~~vvllH--------------G~~~~~~~~w~~~~~~L-~~~~~vi~-~ 58 (286)
T 2yys_A 3 EEIGYVPVGEAELYVEDVGPV------EG--PALFVLH--------------GGPGGNAYVLREGLQDY-LEGFRVVY-F 58 (286)
T ss_dssp EEEEEEECSSCEEEEEEESCT------TS--CEEEEEC--------------CTTTCCSHHHHHHHGGG-CTTSEEEE-E
T ss_pred cceeEEeECCEEEEEEeecCC------CC--CEEEEEC--------------CCCCcchhHHHHHHHHh-cCCCEEEE-E
Confidence 344566679999988776442 12 6677765 33221110001123456 56999999 9
Q ss_pred CCceeecC
Q 007620 563 SIPIIGEG 570 (595)
Q Consensus 563 ~~~~~~~~ 570 (595)
|.|..|.-
T Consensus 59 Dl~G~G~S 66 (286)
T 2yys_A 59 DQRGSGRS 66 (286)
T ss_dssp CCTTSTTS
T ss_pred CCCCCCCC
Confidence 99888753
No 399
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=56.55 E-value=20 Score=32.34 Aligned_cols=59 Identities=15% Similarity=0.134 Sum_probs=36.5
Q ss_pred EEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCC
Q 007620 485 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 564 (595)
Q Consensus 485 v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~ 564 (595)
-+++..||.+|+....- +. |.||++|+. +..... +....+.|+ +||.|+. ++.
T Consensus 5 ~~~~~~~g~~l~~~~~g--------~~--~~vv~lHG~--------------~~~~~~-~~~~~~~l~-~~~~vi~-~d~ 57 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSG--------SG--PPVVLVGGA--------------LSTRAG-GAPLAERLA-PHFTVIC-YDR 57 (262)
T ss_dssp CEEECTTSCEEEEEEEE--------CS--SEEEEECCT--------------TCCGGG-GHHHHHHHT-TTSEEEE-ECC
T ss_pred heEEcCCCcEEEEEEcC--------CC--CcEEEECCC--------------CcChHH-HHHHHHHHh-cCcEEEE-Eec
Confidence 35678899999876642 12 678876642 211110 112245676 9999999 888
Q ss_pred ceeecC
Q 007620 565 PIIGEG 570 (595)
Q Consensus 565 ~~~~~~ 570 (595)
|..|.-
T Consensus 58 ~G~G~S 63 (262)
T 3r0v_A 58 RGRGDS 63 (262)
T ss_dssp TTSTTC
T ss_pred CCCcCC
Confidence 877753
No 400
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=55.96 E-value=14 Score=34.35 Aligned_cols=22 Identities=9% Similarity=0.126 Sum_probs=18.5
Q ss_pred hHHHhccCeEEEeCCCCceeecC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
...|+++||.|+. +|.|..|.-
T Consensus 47 ~~~l~~~g~~vi~-~D~~G~G~S 68 (281)
T 3fob_A 47 VPALVEAGYRVIT-YDRRGFGKS 68 (281)
T ss_dssp HHHHHHTTEEEEE-ECCTTSTTS
T ss_pred HHHHHhCCCEEEE-eCCCCCCCC
Confidence 4688899999999 999988853
No 401
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=55.58 E-value=16 Score=37.37 Aligned_cols=38 Identities=16% Similarity=0.243 Sum_probs=26.4
Q ss_pred ceEEEEEECC--CCcE--EEEEEEcCCCCCCCCCCCCcEEEEeccC
Q 007620 481 QKEMIKYQRK--DGVP--LTATLYLPPGYDQSKDGPLPCLFWAYPE 522 (595)
Q Consensus 481 ~~e~v~~~~~--DG~~--i~g~l~~P~~~~~~k~y~lP~vv~~y~~ 522 (595)
+...|.|++. +|.. +-|.|+.|.+-.+ +.|+|.|.|+.
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~~~----~~pvvs~~hgt 115 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKPAS----PPKIFSYQVYE 115 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSCCS----SCEEEEEECCC
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCCCC----CCcEEEEeCCc
Confidence 4455555444 5654 8999999987432 35999998864
No 402
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=55.36 E-value=14 Score=33.92 Aligned_cols=57 Identities=16% Similarity=0.149 Sum_probs=35.0
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCce
Q 007620 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 487 ~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~ 566 (595)
++..||.+|+.... + +. |.||++| |.+.... .+....+.|+.+||.|+. +|.|.
T Consensus 3 ~~~~~g~~l~y~~~---g-----~g--~~vvllH--------------G~~~~~~-~w~~~~~~l~~~g~~vi~-~D~~G 56 (274)
T 1a8q_A 3 CTTRDGVEIFYKDW---G-----QG--RPVVFIH--------------GWPLNGD-AWQDQLKAVVDAGYRGIA-HDRRG 56 (274)
T ss_dssp EECTTSCEEEEEEE---C-----SS--SEEEEEC--------------CTTCCGG-GGHHHHHHHHHTTCEEEE-ECCTT
T ss_pred EEccCCCEEEEEec---C-----CC--ceEEEEC--------------CCcchHH-HHHHHHHHHHhCCCeEEE-EcCCC
Confidence 56779998876543 1 12 5577755 3222111 111124688899999999 88888
Q ss_pred eec
Q 007620 567 IGE 569 (595)
Q Consensus 567 ~~~ 569 (595)
.|.
T Consensus 57 ~G~ 59 (274)
T 1a8q_A 57 HGH 59 (274)
T ss_dssp STT
T ss_pred CCC
Confidence 775
No 403
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=55.14 E-value=4.7 Score=37.53 Aligned_cols=16 Identities=0% Similarity=-0.124 Sum_probs=11.7
Q ss_pred hHHH----hccCeEEEeCCCC
Q 007620 548 SLIF----LARRFAVLAGPSI 564 (595)
Q Consensus 548 ~q~l----a~~GY~Vl~~~~~ 564 (595)
.+.| +++||.|+. ++.
T Consensus 66 ~~~L~~~a~~~g~~vi~-~d~ 85 (273)
T 1vkh_A 66 ANTIKSMDTESTVCQYS-IEY 85 (273)
T ss_dssp HHHHHHHCTTCCEEEEE-ECC
T ss_pred HHHHhhhhccCCcEEEE-eec
Confidence 3566 688999999 544
No 404
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=55.05 E-value=67 Score=31.68 Aligned_cols=89 Identities=10% Similarity=0.053 Sum_probs=54.8
Q ss_pred eeeeEEEecCCCCCCC--CceeeecCCCC-----CcccceEEc---cC---CCEEEEEEecccccccCCCceEEEEEECC
Q 007620 4 FTGIGIHRLLPDDSLG--PEKEVHGYPDG-----AKINFVSWS---PD---GKRIAFSVRVDEEDNVSSCKLRVWIADAE 70 (595)
Q Consensus 4 ~~~~~~~~~~~~~~~g--~~~~lt~~~~~-----~~~~~~~~S---PD---G~~laf~~~~~~~~~~~~~~~~L~v~d~~ 70 (595)
.+-|.+.||+ ++ +..+...++.. .....+++. |+ ++..||++.. ....|.|+|++
T Consensus 122 ~pkLv~~DL~----t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~--------~~~gLIVydl~ 189 (381)
T 3q6k_A 122 RPAIVAYDLK----QPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF--------LRGALFIYDHK 189 (381)
T ss_dssp CCEEEEEESS----STTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET--------TTTEEEEEETT
T ss_pred CceEEEEECC----CCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC--------CCCcEEEEECC
Confidence 3568888888 44 44333325432 135566666 43 2678999863 45789999999
Q ss_pred CCceEecccC---CCcc----c-------cccccceEEecC----CcEEEEE
Q 007620 71 TGEAKPLFES---PDIC----L-------NAVFGSFVWVNN----STLLIFT 104 (595)
Q Consensus 71 ~g~~~~lt~~---~~~~----~-------~~~~~~~~Wspd----g~~l~~~ 104 (595)
+|+..++... ++.. + ..++..++-||+ ++.|+|.
T Consensus 190 ~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~ 241 (381)
T 3q6k_A 190 KQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYL 241 (381)
T ss_dssp TTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEE
T ss_pred CCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEE
Confidence 9998888631 1100 0 012345667777 7788886
No 405
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=54.58 E-value=11 Score=36.47 Aligned_cols=20 Identities=5% Similarity=-0.064 Sum_probs=15.9
Q ss_pred HHHhccCeEEEeCCCCceeec
Q 007620 549 LIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 549 q~la~~GY~Vl~~~~~~~~~~ 569 (595)
+.|+++||.|+. +|.|..|+
T Consensus 79 ~~l~~~~~~vi~-~D~~G~G~ 98 (377)
T 3i1i_A 79 KAIDTNQYFVIC-TDNLCNVQ 98 (377)
T ss_dssp SSEETTTCEEEE-ECCTTCSC
T ss_pred CccccccEEEEE-eccccccc
Confidence 467789999999 99886543
No 406
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=53.99 E-value=6.5 Score=35.95 Aligned_cols=24 Identities=17% Similarity=0.108 Sum_probs=19.0
Q ss_pred hHHHhccCeEEEeCCCCceeecCCC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEGDK 572 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~~~ 572 (595)
.+.|+++||.|+. +|.|..|.-..
T Consensus 32 ~~~l~~~g~~v~~-~D~~G~G~S~~ 55 (267)
T 3sty_A 32 VALMRSSGHNVTA-LDLGASGINPK 55 (267)
T ss_dssp HHHHHHTTCEEEE-ECCTTSTTCSC
T ss_pred HHHHHhcCCeEEE-eccccCCCCCC
Confidence 4688899999999 88887775433
No 407
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=53.70 E-value=23 Score=32.86 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=17.6
Q ss_pred hHHHhccCeEEEeCCCCceeecC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
...|+++||.|+. ++.|..|.-
T Consensus 49 ~~~l~~~g~~v~~-~d~~G~G~S 70 (309)
T 3u1t_A 49 IPYVVAAGYRAVA-PDLIGMGDS 70 (309)
T ss_dssp HHHHHHTTCEEEE-ECCTTSTTS
T ss_pred HHHHHhCCCEEEE-EccCCCCCC
Confidence 4567889999999 888877753
No 408
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=53.49 E-value=5 Score=34.17 Aligned_cols=21 Identities=5% Similarity=-0.004 Sum_probs=17.7
Q ss_pred hHHHhccCeEEEeCCCCceeec
Q 007620 548 SLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
.+.|+++||.|+. ++.+..|.
T Consensus 26 ~~~l~~~g~~v~~-~d~~g~g~ 46 (176)
T 2qjw_A 26 AEVAERLGWTHER-PDFTDLDA 46 (176)
T ss_dssp HHHHHHTTCEEEC-CCCHHHHT
T ss_pred HHHHHHCCCEEEE-eCCCCCCC
Confidence 4688999999999 88887765
No 409
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=53.26 E-value=7.8 Score=35.85 Aligned_cols=21 Identities=14% Similarity=0.121 Sum_probs=17.9
Q ss_pred hHHHhccCeEEEeCCCCceeec
Q 007620 548 SLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
...|+++||-|+. +|.|..|.
T Consensus 30 ~~~L~~~g~~via-~Dl~G~G~ 50 (264)
T 2wfl_A 30 KPLLESAGHKVTA-VDLSAAGI 50 (264)
T ss_dssp HHHHHHTTCEEEE-ECCTTSTT
T ss_pred HHHHHhCCCEEEE-eecCCCCC
Confidence 4688889999999 99998775
No 410
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=52.86 E-value=16 Score=32.06 Aligned_cols=17 Identities=12% Similarity=0.159 Sum_probs=14.5
Q ss_pred hHHHhc--cCeEEEeCCCCc
Q 007620 548 SLIFLA--RRFAVLAGPSIP 565 (595)
Q Consensus 548 ~q~la~--~GY~Vl~~~~~~ 565 (595)
.+.|++ +||.|+. |+.|
T Consensus 34 ~~~l~~~~~g~~v~~-~d~p 52 (218)
T 1auo_A 34 AEALQESLLTTRFVL-PQAP 52 (218)
T ss_dssp HHHHHTTCTTEEEEE-CCCC
T ss_pred HHHHhhcCCceEEEe-CCCC
Confidence 568888 9999999 8876
No 411
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=52.15 E-value=17 Score=36.47 Aligned_cols=60 Identities=17% Similarity=0.241 Sum_probs=38.1
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhc------cCeEEEeCCC
Q 007620 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA------RRFAVLAGPS 563 (595)
Q Consensus 490 ~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~------~GY~Vl~~~~ 563 (595)
.||.+|+.....+.+ + .. |.||++| |.|.....+ ......|+. .||-|+. ||
T Consensus 92 i~g~~i~~~~~~~~~--~--~~--~pllllH--------------G~~~s~~~~-~~~~~~L~~~~~~~~~gf~vv~-~D 149 (408)
T 3g02_A 92 IEGLTIHFAALFSER--E--DA--VPIALLH--------------GWPGSFVEF-YPILQLFREEYTPETLPFHLVV-PS 149 (408)
T ss_dssp ETTEEEEEEEECCSC--T--TC--EEEEEEC--------------CSSCCGGGG-HHHHHHHHHHCCTTTCCEEEEE-EC
T ss_pred ECCEEEEEEEecCCC--C--CC--CeEEEEC--------------CCCCcHHHH-HHHHHHHhcccccccCceEEEE-EC
Confidence 399999999887653 1 12 5566654 444322211 112457776 5999999 99
Q ss_pred CceeecCC
Q 007620 564 IPIIGEGD 571 (595)
Q Consensus 564 ~~~~~~~~ 571 (595)
+|.+|.-+
T Consensus 150 lpG~G~S~ 157 (408)
T 3g02_A 150 LPGYTFSS 157 (408)
T ss_dssp CTTSTTSC
T ss_pred CCCCCCCC
Confidence 99988633
No 412
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=51.62 E-value=6.4 Score=41.67 Aligned_cols=54 Identities=20% Similarity=0.455 Sum_probs=29.9
Q ss_pred CCCCcEEEEEEEcCCCCC---CCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhcc-CeEEEe
Q 007620 489 RKDGVPLTATLYLPPGYD---QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLA 560 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~---~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~-GY~Vl~ 560 (595)
+.|.+.+ .++.|.+.. +++ ++|+|||+|+|-| +.|+...+ ....||++ |++|+.
T Consensus 108 sEdcL~l--~v~~P~~~~~~~~~~--~~Pv~v~iHGGg~--------~~g~~~~~------~~~~la~~~~~vvv~ 165 (574)
T 3bix_A 108 SEDCLYL--NIYVPTEDDIRDSGG--PKPVMVYIHGGSY--------MEGTGNLY------DGSVLASYGNVIVIT 165 (574)
T ss_dssp CSCCCEE--EEEEEC--------C--CEEEEEECCCSSS--------SSCCGGGS------CCHHHHHHHTCEEEE
T ss_pred CCcCCEE--EEEECCCCCcCCCCC--CCcEEEEECCCcc--------cCCCCCcc------CchhhhccCCEEEEE
Confidence 4566555 577787642 122 4699999886533 22322211 12467776 699998
No 413
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=50.20 E-value=7.6 Score=37.64 Aligned_cols=22 Identities=14% Similarity=-0.023 Sum_probs=17.6
Q ss_pred hhHHHhccCeEEEeCCCCceeec
Q 007620 547 SSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 547 ~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
..+.|+.+||.|+. ++.+..|.
T Consensus 85 ~~~~l~~~g~~v~~-~d~~G~G~ 106 (354)
T 2rau_A 85 IVLYLARNGFNVYT-IDYRTHYV 106 (354)
T ss_dssp HHHHHHHTTEEEEE-EECGGGGC
T ss_pred HHHHHHhCCCEEEE-ecCCCCCC
Confidence 35788999999999 77777664
No 414
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=49.53 E-value=5.8 Score=37.00 Aligned_cols=71 Identities=15% Similarity=0.068 Sum_probs=28.2
Q ss_pred ceEEEEEECCCCcE-EEEEEEcCCCCCCCCC-----CCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhcc
Q 007620 481 QKEMIKYQRKDGVP-LTATLYLPPGYDQSKD-----GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR 554 (595)
Q Consensus 481 ~~e~v~~~~~DG~~-i~g~l~~P~~~~~~k~-----y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~ 554 (595)
..|.+.|++.+|.. ...|+..+.. .+... ..-|.||++|+. -+....| ......|+.
T Consensus 14 ~~~~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lvllHG~-----------~~~~~~~----~~l~~~L~~- 76 (280)
T 3qmv_A 14 GTENLYFQSNALLSQRSAWFPRPVA-APAAEPPDPAAAPLRLVCFPYA-----------GGTVSAF----RGWQERLGD- 76 (280)
T ss_dssp --------------CHHHHSCCCCC-CCCCCCCCTTTCSEEEEEECCT-----------TCCGGGG----TTHHHHHCT-
T ss_pred CcceeeeecchhhhhcchheecCCC-CCcccccccCCCCceEEEECCC-----------CCChHHH----HHHHHhcCC-
Confidence 56778888888743 3445443321 21100 011677776642 0111111 122456665
Q ss_pred CeEEEeCCCCceeec
Q 007620 555 RFAVLAGPSIPIIGE 569 (595)
Q Consensus 555 GY~Vl~~~~~~~~~~ 569 (595)
||.|+. ++.|..|.
T Consensus 77 ~~~v~~-~D~~G~G~ 90 (280)
T 3qmv_A 77 EVAVVP-VQLPGRGL 90 (280)
T ss_dssp TEEEEE-CCCTTSGG
T ss_pred CceEEE-EeCCCCCC
Confidence 999999 99888775
No 415
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=47.92 E-value=18 Score=36.43 Aligned_cols=16 Identities=13% Similarity=0.160 Sum_probs=13.2
Q ss_pred HHhccCeEEEeCCCCce
Q 007620 550 IFLARRFAVLAGPSIPI 566 (595)
Q Consensus 550 ~la~~GY~Vl~~~~~~~ 566 (595)
.|+++||.|+. +|.+.
T Consensus 137 ~L~~~~~~Vi~-~D~~G 152 (444)
T 2vat_A 137 AFDTSRYFIIC-LNYLG 152 (444)
T ss_dssp SBCTTTCEEEE-ECCTT
T ss_pred hhhccCCEEEE-ecCCC
Confidence 46689999999 77776
No 416
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=47.86 E-value=40 Score=30.96 Aligned_cols=60 Identities=20% Similarity=0.244 Sum_probs=36.0
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCc
Q 007620 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (595)
Q Consensus 486 ~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~ 565 (595)
.+...||.+|+.... + +. |.||++|+.. ++...|. ...+.|+. ||.|+. +|.|
T Consensus 16 ~~~~~~g~~l~~~~~---g-----~~--~~vv~lHG~~-----------~~~~~~~----~~~~~l~~-~~~v~~-~D~~ 68 (306)
T 3r40_A 16 EWINTSSGRIFARVG---G-----DG--PPLLLLHGFP-----------QTHVMWH----RVAPKLAE-RFKVIV-ADLP 68 (306)
T ss_dssp EEECCTTCCEEEEEE---E-----CS--SEEEEECCTT-----------CCGGGGG----GTHHHHHT-TSEEEE-ECCT
T ss_pred EEEEeCCEEEEEEEc---C-----CC--CeEEEECCCC-----------CCHHHHH----HHHHHhcc-CCeEEE-eCCC
Confidence 334569999887764 1 12 7788876420 1111111 22457777 999999 8888
Q ss_pred eeecCCC
Q 007620 566 IIGEGDK 572 (595)
Q Consensus 566 ~~~~~~~ 572 (595)
..|.-..
T Consensus 69 G~G~S~~ 75 (306)
T 3r40_A 69 GYGWSDM 75 (306)
T ss_dssp TSTTSCC
T ss_pred CCCCCCC
Confidence 8775433
No 417
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=47.69 E-value=2e+02 Score=27.65 Aligned_cols=163 Identities=12% Similarity=0.028 Sum_probs=81.9
Q ss_pred eeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccc-cCCCCcee---ecCC
Q 007620 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR-EGMRSISW---RADK 253 (595)
Q Consensus 178 ~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~w---spdg 253 (595)
..+.|.+....++++... ...|.+++..++....+ ..+... ..+.. .....+.| -|++
T Consensus 16 E~~~wd~~~g~~~vs~l~------------~g~V~~~~~~~~~~~~~-~~~~~s-----~~g~~~~~~sGl~~~~~D~~g 77 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLY------------KGRIEVYNPKTQSHFNV-VIDGAS-----SNGDGEQQMSGLSLLTHDNSK 77 (334)
T ss_dssp SCEEEETTTTEEEEEETT------------TTEEEEECTTTCCEEEE-CCTTTC-----CSSCCSEEEEEEEESSSSSCC
T ss_pred cCccCcCCCCEEEEEecc------------CCEEEEEcCCCCeEEEE-ecCCcc-----ccCCCcceeeEEEEeccCCCC
Confidence 478998877788888653 34788999986655555 332110 00000 01134677 4664
Q ss_pred CeeEEEEEeecCCCcc----cccCCcceEEeccCCCCC---CCCceecccc----C----------ccccceeecCCCcE
Q 007620 254 PSTLYWVEAQDRGDAN----VEVSPRDIIYTQPAEPAE---GEKPEILHKL----D----------LRFRSVSWCDDSLA 312 (595)
Q Consensus 254 ~~~l~~~~~~d~~~~~----~~~~~~~~~~~~d~~~~~---g~~~~~l~~~----~----------~~~~~~~wspDg~~ 312 (595)
+ |+.+ .+.+... ........++.+|+ . .++.....+. + .....+...++|.+
T Consensus 78 r--L~vv--~~~~~af~~~g~~~~g~~~v~~~Dl---~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna 150 (334)
T 2p9w_A 78 R--LFAV--MKNAKSFNFADQSSHGASSFHSFNL---PLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS 150 (334)
T ss_dssp E--EEEE--EEETTTTCTTSCCSSSCCEEEEEES---SCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE
T ss_pred c--EEEE--EcccccccccccccCCCCEEEEEcC---CcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE
Confidence 3 5433 2211100 01122345666676 3 2333321111 1 12345667788988
Q ss_pred EEEEEeecccceEEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEEEe
Q 007620 313 LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (595)
Q Consensus 313 l~~~~~~~~~~~~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 371 (595)
++.+... ...||++++++ .....+. .........+|-.-+.+.|||+.|++..
T Consensus 151 YVt~s~~---~~~I~rV~pdG--~~~~~~~-~~~~~~~~~~G~nGIv~~pdg~~Liv~~ 203 (334)
T 2p9w_A 151 YVAFALG---MPAIARVSADG--KTVSTFA-WESGNGGQRPGYSGITFDPHSNKLIAFG 203 (334)
T ss_dssp EEEEEES---SCEEEEECTTS--CCEEEEE-ECCCCSSSCCSCSEEEEETTTTEEEEES
T ss_pred EEeCCCC---CCeEEEEeCCC--CEEeeee-ecCCCcccccCcceEEEeCCCCEEEEEc
Confidence 7765421 14799999998 3223221 1111111112223378889999887764
No 418
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=47.61 E-value=8.5 Score=40.82 Aligned_cols=37 Identities=27% Similarity=0.369 Sum_probs=21.5
Q ss_pred CCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhc-cCeEEEe
Q 007620 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLA 560 (595)
Q Consensus 512 ~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~-~GY~Vl~ 560 (595)
++|||||+|+|.|. .|+.... ....+.||+ .|++|+.
T Consensus 140 ~~PV~v~iHGGg~~--------~g~~~~~----~~~~~~l~~~~~~vvv~ 177 (585)
T 1dx4_A 140 GLPILIWIYGGGFM--------TGSATLD----IYNADIMAAVGNVIVAS 177 (585)
T ss_dssp SEEEEEEECCSTTT--------CCCTTCG----GGCCHHHHHHHTCEEEE
T ss_pred CCCEEEEECCCccc--------CCCCCCC----CCCchhhhccCCEEEEE
Confidence 45999998865432 2222110 111256665 7999998
No 419
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=47.09 E-value=26 Score=32.45 Aligned_cols=20 Identities=15% Similarity=-0.112 Sum_probs=16.2
Q ss_pred HHHhccCeEEEeCCCCceeec
Q 007620 549 LIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 549 q~la~~GY~Vl~~~~~~~~~~ 569 (595)
..++++||.|+. +|.+..|.
T Consensus 49 ~~l~~~g~~vi~-~D~~G~G~ 68 (293)
T 1mtz_A 49 RDMTKEGITVLF-YDQFGCGR 68 (293)
T ss_dssp GGGGGGTEEEEE-ECCTTSTT
T ss_pred HHHHhcCcEEEE-ecCCCCcc
Confidence 455788999999 88888775
No 420
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=46.36 E-value=14 Score=34.32 Aligned_cols=22 Identities=18% Similarity=0.152 Sum_probs=18.6
Q ss_pred hHHHhccCeEEEeCCCCceeecC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
...|+++||.|+. +|.|..|.-
T Consensus 24 ~~~L~~~g~rVia-~Dl~G~G~S 45 (273)
T 1xkl_A 24 KPLLEAAGHKVTA-LDLAASGTD 45 (273)
T ss_dssp HHHHHHTTCEEEE-CCCTTSTTC
T ss_pred HHHHHhCCCEEEE-ecCCCCCCC
Confidence 4688889999999 999988753
No 421
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=46.28 E-value=13 Score=34.03 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=17.0
Q ss_pred hHHHhccCeEEEeCCCCceeecC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
.+.|+++||.|+. ++.|..|.-
T Consensus 44 ~~~l~~~g~~v~~-~d~~G~G~s 65 (279)
T 4g9e_A 44 LEGEIGKKWRVIA-PDLPGHGKS 65 (279)
T ss_dssp HHSHHHHHEEEEE-ECCTTSTTS
T ss_pred HhHHHhcCCeEEe-ecCCCCCCC
Confidence 3456788999999 888877753
No 422
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=45.89 E-value=49 Score=30.22 Aligned_cols=60 Identities=18% Similarity=0.119 Sum_probs=36.1
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCc
Q 007620 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (595)
Q Consensus 486 ~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~ 565 (595)
.|...||.+|+....=+. .. |+||++|+ .+.....+ ......|+ ++|-|+. +|.|
T Consensus 8 ~~~~~~g~~l~y~~~G~~------~~--p~lvl~hG--------------~~~~~~~w-~~~~~~L~-~~~~vi~-~D~r 62 (266)
T 3om8_A 8 FLATSDGASLAYRLDGAA------EK--PLLALSNS--------------IGTTLHMW-DAQLPALT-RHFRVLR-YDAR 62 (266)
T ss_dssp EEECTTSCEEEEEEESCT------TS--CEEEEECC--------------TTCCGGGG-GGGHHHHH-TTCEEEE-ECCT
T ss_pred EEeccCCcEEEEEecCCC------CC--CEEEEeCC--------------CccCHHHH-HHHHHHhh-cCcEEEE-EcCC
Confidence 456789999988776331 12 77777653 21111111 11234665 4899999 9999
Q ss_pred eeecC
Q 007620 566 IIGEG 570 (595)
Q Consensus 566 ~~~~~ 570 (595)
..|.-
T Consensus 63 G~G~S 67 (266)
T 3om8_A 63 GHGAS 67 (266)
T ss_dssp TSTTS
T ss_pred CCCCC
Confidence 88753
No 423
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=45.27 E-value=12 Score=33.95 Aligned_cols=24 Identities=13% Similarity=0.047 Sum_probs=19.3
Q ss_pred hhHHHhccCeEEEeCCCCceeecCC
Q 007620 547 SSLIFLARRFAVLAGPSIPIIGEGD 571 (595)
Q Consensus 547 ~~q~la~~GY~Vl~~~~~~~~~~~~ 571 (595)
..+.|+.+||.|+. +|.|..|.-.
T Consensus 23 ~~~~l~~~g~~vi~-~D~~G~G~S~ 46 (258)
T 3dqz_A 23 LKPLLESAGHRVTA-VELAASGIDP 46 (258)
T ss_dssp HHHHHHHTTCEEEE-ECCTTSTTCS
T ss_pred HHHHHHhCCCEEEE-ecCCCCcCCC
Confidence 35789999999999 8888877543
No 424
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=43.73 E-value=14 Score=33.87 Aligned_cols=22 Identities=18% Similarity=0.101 Sum_probs=18.8
Q ss_pred hHHHhccCeEEEeCCCCceeecC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
...|+++||.|+. +|.|..|.-
T Consensus 23 ~~~L~~~g~~via-~Dl~G~G~S 44 (257)
T 3c6x_A 23 KPLLEALGHKVTA-LDLAASGVD 44 (257)
T ss_dssp HHHHHHTTCEEEE-ECCTTSTTC
T ss_pred HHHHHhCCCEEEE-eCCCCCCCC
Confidence 4688899999999 999988864
No 425
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=42.89 E-value=8.4 Score=33.78 Aligned_cols=21 Identities=10% Similarity=0.178 Sum_probs=15.5
Q ss_pred hHHHhccC--eEEEeCCCCceeec
Q 007620 548 SLIFLARR--FAVLAGPSIPIIGE 569 (595)
Q Consensus 548 ~q~la~~G--Y~Vl~~~~~~~~~~ 569 (595)
.++++++| |.|+. |+.|..|.
T Consensus 24 ~~~~~~~~~~~~v~~-pdl~~~g~ 46 (202)
T 4fle_A 24 KSWLQQHHPHIEMQI-PQLPPYPA 46 (202)
T ss_dssp HHHHHHHCTTSEEEC-CCCCSSHH
T ss_pred HHHHHHcCCCcEEEE-eCCCCCHH
Confidence 35777765 89998 88887653
No 426
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=42.85 E-value=39 Score=31.55 Aligned_cols=62 Identities=11% Similarity=0.035 Sum_probs=35.7
Q ss_pred EEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCC
Q 007620 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (595)
Q Consensus 483 e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~ 562 (595)
+...++..||.+|+....-++ +. |.||++| |++.... ......+|.++||.|+. +
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~------~g--~pvvllH--------------G~~~~~~--~~~~~~~~~~~~~~vi~-~ 66 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNP------HG--KPVVMLH--------------GGPGGGC--NDKMRRFHDPAKYRIVL-F 66 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECT------TS--EEEEEEC--------------STTTTCC--CGGGGGGSCTTTEEEEE-E
T ss_pred ccceEEcCCCCEEEEEecCCC------CC--CeEEEEC--------------CCCCccc--cHHHHHhcCcCcceEEE-E
Confidence 344566668988876554221 12 4466655 3332111 11122456678999999 8
Q ss_pred CCceeec
Q 007620 563 SIPIIGE 569 (595)
Q Consensus 563 ~~~~~~~ 569 (595)
|.|..|.
T Consensus 67 D~~G~G~ 73 (313)
T 1azw_A 67 DQRGSGR 73 (313)
T ss_dssp CCTTSTT
T ss_pred CCCCCcC
Confidence 8888775
No 427
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=42.78 E-value=2.3e+02 Score=27.10 Aligned_cols=68 Identities=19% Similarity=0.179 Sum_probs=35.8
Q ss_pred eeeeEECCC---CCeEEEEEcccCccccccCcccceeEEEEcCCCc---eEEE-eccCCCCccCCccccccccCCCCcee
Q 007620 177 YTAVEPSPD---QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK---LVRE-LCDLPPAEDIPVCYNSVREGMRSISW 249 (595)
Q Consensus 177 ~~~~~~SpD---g~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~w 249 (595)
...++++|| +.+|+++...... .....|.+++.+++ ..+. +...+... +.......+.+
T Consensus 77 p~gia~~pdf~~~g~lYv~~~~~~~-------~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~-------~~~h~~~~l~~ 142 (352)
T 2ism_A 77 LLGLALHPRFPQEPYVYAYRTVAEG-------GLRNQVVRLRHLGERGVLDRVVLDGIPARP-------HGLHSGGRIAF 142 (352)
T ss_dssp EEEEEECTTTTTSCEEEEEEEECTT-------SSEEEEEEEEECSSCEEEEEEEEEEECCCT-------TCCCCCCCEEE
T ss_pred ceeEEECCCCCCCCEEEEEEecCCC-------CCccEEEEEEeCCCCcCceEEEEEeCCCCC-------CCCcCCceEEE
Confidence 457899999 7777776432110 01246888887654 2222 23232100 00011346889
Q ss_pred ecCCCeeEEEE
Q 007620 250 RADKPSTLYWV 260 (595)
Q Consensus 250 spdg~~~l~~~ 260 (595)
.|||. ||+.
T Consensus 143 ~pdG~--Lyv~ 151 (352)
T 2ism_A 143 GPDGM--LYVT 151 (352)
T ss_dssp CTTSC--EEEE
T ss_pred CCCCC--EEEE
Confidence 99985 6554
No 428
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=42.71 E-value=36 Score=32.20 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=18.8
Q ss_pred hHHHhccCeEEEeCCCCceeecC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
...|+.+||-|+. +|.|..|.-
T Consensus 67 ~~~L~~~g~rvia-~Dl~G~G~S 88 (310)
T 1b6g_A 67 IPVFAESGARVIA-PDFFGFGKS 88 (310)
T ss_dssp HHHHHHTTCEEEE-ECCTTSTTS
T ss_pred HHHHHhCCCeEEE-eCCCCCCCC
Confidence 4688999999999 999988863
No 429
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=42.59 E-value=26 Score=33.21 Aligned_cols=56 Identities=18% Similarity=0.418 Sum_probs=34.8
Q ss_pred ECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCcee
Q 007620 488 QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPII 567 (595)
Q Consensus 488 ~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~ 567 (595)
...||.+|+.... + .. |.||++| |.+.....+ ......|+++||.|+. +|.|..
T Consensus 16 ~~~~g~~l~y~~~---G-----~g--~~vvllH--------------G~~~~~~~w-~~~~~~L~~~g~~via-~Dl~G~ 69 (328)
T 2cjp_A 16 VAVNGLNMHLAEL---G-----EG--PTILFIH--------------GFPELWYSW-RHQMVYLAERGYRAVA-PDLRGY 69 (328)
T ss_dssp EEETTEEEEEEEE---C-----SS--SEEEEEC--------------CTTCCGGGG-HHHHHHHHTTTCEEEE-ECCTTS
T ss_pred ecCCCcEEEEEEc---C-----CC--CEEEEEC--------------CCCCchHHH-HHHHHHHHHCCcEEEE-ECCCCC
Confidence 3458888887654 2 12 6677765 333211111 1124578889999999 999988
Q ss_pred ec
Q 007620 568 GE 569 (595)
Q Consensus 568 ~~ 569 (595)
|.
T Consensus 70 G~ 71 (328)
T 2cjp_A 70 GD 71 (328)
T ss_dssp TT
T ss_pred CC
Confidence 85
No 430
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=42.48 E-value=35 Score=31.95 Aligned_cols=22 Identities=27% Similarity=0.274 Sum_probs=18.8
Q ss_pred hHHHhccCeEEEeCCCCceeecC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
...|+.+||-|+. +|.|..|.-
T Consensus 66 ~~~L~~~g~rvia-~Dl~G~G~S 87 (297)
T 2xt0_A 66 LPVFTAAGGRVVA-PDLFGFGRS 87 (297)
T ss_dssp HHHHHHTTCEEEE-ECCTTSTTS
T ss_pred HHHHHhCCcEEEE-eCCCCCCCC
Confidence 4688999999999 999988853
No 431
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=42.22 E-value=40 Score=31.54 Aligned_cols=62 Identities=21% Similarity=0.211 Sum_probs=35.6
Q ss_pred EEEEEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCC
Q 007620 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (595)
Q Consensus 483 e~v~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~ 562 (595)
+...++..||.+|+....=++ +. |.||++| |++.... ......+|.++||.|+. +
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~------~g--~~vvllH--------------G~~~~~~--~~~~~~~~~~~~~~vi~-~ 69 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNP------NG--KPAVFIH--------------GGPGGGI--SPHHRQLFDPERYKVLL-F 69 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECT------TS--EEEEEEC--------------CTTTCCC--CGGGGGGSCTTTEEEEE-E
T ss_pred eeeEEEcCCCcEEEEEEcCCC------CC--CcEEEEC--------------CCCCccc--chhhhhhccccCCeEEE-E
Confidence 334566679998876554221 12 4466655 3332111 11123466678999999 8
Q ss_pred CCceeec
Q 007620 563 SIPIIGE 569 (595)
Q Consensus 563 ~~~~~~~ 569 (595)
|.+..|.
T Consensus 70 D~~G~G~ 76 (317)
T 1wm1_A 70 DQRGCGR 76 (317)
T ss_dssp CCTTSTT
T ss_pred CCCCCCC
Confidence 8888775
No 432
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=41.54 E-value=17 Score=32.26 Aligned_cols=18 Identities=11% Similarity=0.222 Sum_probs=13.9
Q ss_pred hHHHhccCeEEEeCCCCce
Q 007620 548 SLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~ 566 (595)
.+.|+++||.|+. ++.|.
T Consensus 43 ~~~l~~~g~~v~~-~~~~~ 60 (232)
T 1fj2_A 43 FAGIRSSHIKYIC-PHAPV 60 (232)
T ss_dssp HHTTCCTTEEEEE-CCCCE
T ss_pred HHHHhcCCcEEEe-cCCCc
Confidence 3577778999999 76655
No 433
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=40.40 E-value=34 Score=31.43 Aligned_cols=56 Identities=16% Similarity=0.105 Sum_probs=33.0
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceeec
Q 007620 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 490 ~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
.||.+|+....-++ +. |+||++|+ .+.....+ ......| ++||.|+. ++.|..|.
T Consensus 17 ~~g~~l~~~~~g~~------~~--~~vl~lHG--------------~~~~~~~~-~~~~~~l-~~~~~v~~-~d~~G~G~ 71 (299)
T 3g9x_A 17 VLGERMHYVDVGPR------DG--TPVLFLHG--------------NPTSSYLW-RNIIPHV-APSHRCIA-PDLIGMGK 71 (299)
T ss_dssp ETTEEEEEEEESCS------SS--CCEEEECC--------------TTCCGGGG-TTTHHHH-TTTSCEEE-ECCTTSTT
T ss_pred eCCeEEEEEecCCC------CC--CEEEEECC--------------CCccHHHH-HHHHHHH-ccCCEEEe-eCCCCCCC
Confidence 48999987776432 12 56777663 22111111 1123556 46999999 88887775
Q ss_pred C
Q 007620 570 G 570 (595)
Q Consensus 570 ~ 570 (595)
-
T Consensus 72 s 72 (299)
T 3g9x_A 72 S 72 (299)
T ss_dssp S
T ss_pred C
Confidence 3
No 434
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=40.24 E-value=19 Score=32.64 Aligned_cols=21 Identities=19% Similarity=0.020 Sum_probs=17.7
Q ss_pred hHHHhccCeEEEeCCCCceeec
Q 007620 548 SLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
.+.|+.+||.|+. +|.|..|.
T Consensus 44 ~~~l~~~g~~vi~-~D~~G~G~ 64 (254)
T 2ocg_A 44 LKNLNKKLFTVVA-WDPRGYGH 64 (254)
T ss_dssp HHHSCTTTEEEEE-ECCTTSTT
T ss_pred HHHHhhCCCeEEE-ECCCCCCC
Confidence 4688889999999 88888775
No 435
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=39.51 E-value=10 Score=36.92 Aligned_cols=16 Identities=6% Similarity=0.139 Sum_probs=13.5
Q ss_pred HHhccCeEEEeCCCCce
Q 007620 550 IFLARRFAVLAGPSIPI 566 (595)
Q Consensus 550 ~la~~GY~Vl~~~~~~~ 566 (595)
.|+++||.|+. +|.|.
T Consensus 93 ~L~~~g~~vi~-~D~~G 108 (377)
T 2b61_A 93 ALDTDRYFFIS-SNVLG 108 (377)
T ss_dssp SEETTTCEEEE-ECCTT
T ss_pred ccccCCceEEE-ecCCC
Confidence 37789999999 88876
No 436
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=39.51 E-value=23 Score=32.61 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=17.7
Q ss_pred hHHHhccCeEEEeCCCCceeec
Q 007620 548 SLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
...|+++||.|+. ++.|..|.
T Consensus 64 ~~~l~~~g~~vi~-~D~~G~G~ 84 (293)
T 3hss_A 64 VPAFLAAGYRCIT-FDNRGIGA 84 (293)
T ss_dssp HHHHHHTTEEEEE-ECCTTSGG
T ss_pred hhhHhhcCCeEEE-EccCCCCC
Confidence 5688899999999 88887765
No 437
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=38.82 E-value=32 Score=30.38 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=15.0
Q ss_pred HHHhccCeEEEeCCCCceeecC
Q 007620 549 LIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 549 q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
..|+ +||.|+. ++.|..|..
T Consensus 36 ~~l~-~g~~v~~-~d~~g~g~s 55 (245)
T 3e0x_A 36 EKYL-EDYNCIL-LDLKGHGES 55 (245)
T ss_dssp GGGC-TTSEEEE-ECCTTSTTC
T ss_pred HHHH-hCCEEEE-ecCCCCCCC
Confidence 3454 8999999 888877653
No 438
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=38.57 E-value=18 Score=32.15 Aligned_cols=18 Identities=11% Similarity=0.146 Sum_probs=14.6
Q ss_pred hHHHhc--cCeEEEeCCCCce
Q 007620 548 SLIFLA--RRFAVLAGPSIPI 566 (595)
Q Consensus 548 ~q~la~--~GY~Vl~~~~~~~ 566 (595)
.+.|++ +||.|+. |+.|.
T Consensus 44 ~~~l~~~~~g~~v~~-~d~p~ 63 (226)
T 3cn9_A 44 AEALQMVLPSTRFIL-PQAPS 63 (226)
T ss_dssp HHHHHHHCTTEEEEE-CCCCE
T ss_pred HHHHhhcCCCcEEEe-ecCCC
Confidence 467887 9999999 88773
No 439
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=38.52 E-value=17 Score=31.25 Aligned_cols=16 Identities=19% Similarity=0.137 Sum_probs=13.4
Q ss_pred HHHhccCeEEEeCCCCc
Q 007620 549 LIFLARRFAVLAGPSIP 565 (595)
Q Consensus 549 q~la~~GY~Vl~~~~~~ 565 (595)
+.|+++||.|+. ++.|
T Consensus 27 ~~l~~~g~~v~~-~d~~ 42 (192)
T 1uxo_A 27 KRLLADGVQADI-LNMP 42 (192)
T ss_dssp HHHHHTTCEEEE-ECCS
T ss_pred HHHHhCCcEEEE-ecCC
Confidence 468889999999 7777
No 440
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=37.50 E-value=4e+02 Score=28.33 Aligned_cols=52 Identities=13% Similarity=0.112 Sum_probs=29.7
Q ss_pred ceEEEEcC-CCCee-ecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceE
Q 007620 157 AQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (595)
Q Consensus 157 ~~l~~~d~-~g~~~-~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~ 221 (595)
..|..+|+ +|+.. ++..........++..|..|++.+ . ...|+.+|.++|+.
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt-~------------dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGS-A------------DGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC-T------------TSEEEEEETTTCCE
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEEC-C------------CCcEEEEECCCCcc
Confidence 56889999 77543 222121111235556666555543 2 23788999886654
No 441
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=37.35 E-value=31 Score=32.90 Aligned_cols=61 Identities=13% Similarity=0.048 Sum_probs=34.1
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhc-cCeEEEeCCCCceee
Q 007620 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIG 568 (595)
Q Consensus 490 ~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~-~GY~Vl~~~~~~~~~ 568 (595)
.+|.+|+....-|.+-. ... .| ||++| |++..... +......|+. .||.|+. +|.+..|
T Consensus 35 ~~g~~l~y~~~G~~~~~--~~g-~p-lvllH--------------G~~~~~~~-w~~~~~~l~~~~~~~Via-~D~rG~G 94 (330)
T 3nwo_A 35 FGDHETWVQVTTPENAQ--PHA-LP-LIVLH--------------GGPGMAHN-YVANIAALADETGRTVIH-YDQVGCG 94 (330)
T ss_dssp ETTEEEEEEEECCSSCC--TTC-CC-EEEEC--------------CTTTCCSG-GGGGGGGHHHHHTCCEEE-ECCTTST
T ss_pred ecCcEEEEEEecCccCC--CCC-Cc-EEEEC--------------CCCCCchh-HHHHHHHhccccCcEEEE-ECCCCCC
Confidence 48899998888664211 101 15 44444 33321111 1122345665 6999999 8888887
Q ss_pred cC
Q 007620 569 EG 570 (595)
Q Consensus 569 ~~ 570 (595)
.-
T Consensus 95 ~S 96 (330)
T 3nwo_A 95 NS 96 (330)
T ss_dssp TS
T ss_pred CC
Confidence 53
No 442
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=36.78 E-value=28 Score=32.04 Aligned_cols=22 Identities=18% Similarity=0.227 Sum_probs=18.5
Q ss_pred hHHHhccCeEEEeCCCCceeecC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
.+.|+++||.|+. +|.|..|.-
T Consensus 43 ~~~L~~~g~~vi~-~D~~G~G~S 64 (277)
T 1brt_A 43 SAALLDAGYRVIT-YDRRGFGQS 64 (277)
T ss_dssp HHHHHHTTCEEEE-ECCTTSTTS
T ss_pred HHHHhhCCCEEEE-eCCCCCCCC
Confidence 4688999999999 999888753
No 443
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=36.72 E-value=20 Score=32.76 Aligned_cols=22 Identities=14% Similarity=0.200 Sum_probs=17.7
Q ss_pred hhHHHhccCeEEEeCCCCceeec
Q 007620 547 SSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 547 ~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
..+.|+.+||.|+. ++.|..|.
T Consensus 59 ~~~~l~~~G~~v~~-~d~~G~G~ 80 (270)
T 3rm3_A 59 LAEAYAKAGYTVCL-PRLKGHGT 80 (270)
T ss_dssp HHHHHHHTTCEEEE-CCCTTCSS
T ss_pred HHHHHHHCCCEEEE-eCCCCCCC
Confidence 35789999999999 88876654
No 444
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=36.62 E-value=23 Score=34.70 Aligned_cols=11 Identities=9% Similarity=-0.097 Sum_probs=7.6
Q ss_pred eEEEEcCCCce
Q 007620 210 KVQVWTTDGKL 220 (595)
Q Consensus 210 ~l~~~d~~g~~ 220 (595)
.++.+|..+|+
T Consensus 184 ~v~a~d~~tG~ 194 (369)
T 2hz6_A 184 LVVTVDSESGD 194 (369)
T ss_dssp EEEEECTTTCC
T ss_pred EEEEEECCCCc
Confidence 67788876554
No 445
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=36.50 E-value=20 Score=30.91 Aligned_cols=18 Identities=22% Similarity=0.196 Sum_probs=14.4
Q ss_pred hHHHhcc-CeEEEeCCCCce
Q 007620 548 SLIFLAR-RFAVLAGPSIPI 566 (595)
Q Consensus 548 ~q~la~~-GY~Vl~~~~~~~ 566 (595)
.+.|+++ ||.|+. ++.|.
T Consensus 28 ~~~l~~~~g~~vi~-~d~~g 46 (194)
T 2qs9_A 28 KKELEKIPGFQCLA-KNMPD 46 (194)
T ss_dssp HHHHTTSTTCCEEE-CCCSS
T ss_pred HHHHhhccCceEEE-eeCCC
Confidence 4678888 999999 77774
No 446
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=36.20 E-value=1.2e+02 Score=30.56 Aligned_cols=63 Identities=19% Similarity=0.425 Sum_probs=39.0
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc----cccccceEEecC---CcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL----NAVFGSFVWVNN---STLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~----~~~~~~~~Wspd---g~~l~~~ 104 (595)
......|.|||+ | |++.+ ....|++++..+|+...+........ ..+.-.++|+|| +..|++.
T Consensus 28 ~P~~~a~~pdG~-l-~V~e~--------~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 28 KPHALLWGPDNQ-I-WLTER--------ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp SEEEEEECTTSC-E-EEEET--------TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CceEEEEcCCCc-E-EEEEc--------CCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 466789999997 3 33432 23479999877677665543332110 112337899997 7777775
No 447
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=34.14 E-value=37 Score=32.59 Aligned_cols=19 Identities=11% Similarity=0.261 Sum_probs=15.0
Q ss_pred HHhccCeEEEeCCCCce--eec
Q 007620 550 IFLARRFAVLAGPSIPI--IGE 569 (595)
Q Consensus 550 ~la~~GY~Vl~~~~~~~--~~~ 569 (595)
.|+++||.|+. +|.+. .|.
T Consensus 84 ~l~~~g~~vi~-~D~~G~~~G~ 104 (366)
T 2pl5_A 84 SFDTNQYFIIC-SNVIGGCKGS 104 (366)
T ss_dssp SEETTTCEEEE-ECCTTCSSSS
T ss_pred cccccccEEEE-ecCCCcccCC
Confidence 36688999999 88887 564
No 448
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=33.41 E-value=30 Score=33.23 Aligned_cols=22 Identities=9% Similarity=-0.034 Sum_probs=18.0
Q ss_pred hhHHHhccCeEEEeCCCCceeec
Q 007620 547 SSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 547 ~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
..+.|+.+||.|+. ++.|..|.
T Consensus 33 l~~~L~~~G~~V~~-~d~~g~g~ 54 (320)
T 1ys1_X 33 IQEDLQQRGATVYV-ANLSGFQS 54 (320)
T ss_dssp HHHHHHHTTCCEEE-CCCCSSCC
T ss_pred HHHHHHhCCCEEEE-EcCCCCCC
Confidence 35789999999999 88887664
No 449
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=32.34 E-value=21 Score=32.41 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=17.6
Q ss_pred hHHHhccCeEEEeCCCCceeec
Q 007620 548 SLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
.+.|+++||.|+. +|.|..|.
T Consensus 36 ~~~L~~~g~~vi~-~D~~GhG~ 56 (247)
T 1tqh_A 36 GRFLESKGYTCHA-PIYKGHGV 56 (247)
T ss_dssp HHHHHHTTCEEEE-CCCTTSSS
T ss_pred HHHHHHCCCEEEe-cccCCCCC
Confidence 4678889999999 99888774
No 450
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=32.22 E-value=28 Score=31.30 Aligned_cols=20 Identities=20% Similarity=0.310 Sum_probs=15.8
Q ss_pred hHHHhccCeEEEeCCCCceeec
Q 007620 548 SLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
.+.|+. ||.|+. +|.|..|.
T Consensus 40 ~~~l~~-g~~v~~-~D~~G~G~ 59 (269)
T 4dnp_A 40 LPFFLR-DYRVVL-YDLVCAGS 59 (269)
T ss_dssp GGGGTT-TCEEEE-ECCTTSTT
T ss_pred HHHHhC-CcEEEE-EcCCCCCC
Confidence 457777 999999 88887664
No 451
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=32.22 E-value=16 Score=35.15 Aligned_cols=20 Identities=10% Similarity=-0.170 Sum_probs=16.0
Q ss_pred hHHHhccCeEEEeCCCCceee
Q 007620 548 SLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~ 568 (595)
.++|+++||.|+. ++.|..|
T Consensus 87 ~~~L~~~Gy~V~a-~DlpG~G 106 (316)
T 3icv_A 87 IPLSAQLGYTPCW-ISPPPFM 106 (316)
T ss_dssp HHHHHHTTCEEEE-ECCTTTT
T ss_pred HHHHHHCCCeEEE-ecCCCCC
Confidence 4689999999998 7777544
No 452
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=31.22 E-value=3.1e+02 Score=25.07 Aligned_cols=69 Identities=9% Similarity=-0.161 Sum_probs=40.3
Q ss_pred ceeeeEEEecCCCCCCCC---ceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEeccc
Q 007620 3 FFTGIGIHRLLPDDSLGP---EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (595)
Q Consensus 3 ~~~~~~~~~~~~~~~~g~---~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~ 79 (595)
...++|++|+. +++ -+++..++.. ........-++ +|+........ .....++++|+.+++.+++..
T Consensus 76 ~~~~~~~~d~~----~~~~~~W~~~~~~p~~-r~~~~~~~~~~-~lyv~GG~~~~----~~~~~~~~~d~~~~~W~~~~~ 145 (301)
T 2vpj_A 76 RLSSVECLDYT----ADEDGVWYSVAPMNVR-RGLAGATTLGD-MIYVSGGFDGS----RRHTSMERYDPNIDQWSMLGD 145 (301)
T ss_dssp BCCCEEEEETT----CCTTCCCEEECCCSSC-CBSCEEEEETT-EEEEECCBCSS----CBCCEEEEEETTTTEEEEEEE
T ss_pred cCceEEEEECC----CCCCCeeEECCCCCCC-ccceeEEEECC-EEEEEcccCCC----cccceEEEEcCCCCeEEECCC
Confidence 35689999997 555 5666655543 33333333455 44443322110 224689999999988777754
Q ss_pred CC
Q 007620 80 SP 81 (595)
Q Consensus 80 ~~ 81 (595)
.+
T Consensus 146 ~p 147 (301)
T 2vpj_A 146 MQ 147 (301)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 453
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=31.20 E-value=69 Score=29.75 Aligned_cols=55 Identities=13% Similarity=0.089 Sum_probs=32.8
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceee
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~ 568 (595)
..+|..++....-| . |+||++|+. +.... .+....+.|++ ||.|+. ++.|..|
T Consensus 54 ~~~~~~~~~~~~g~--------~--p~vv~lhG~--------------~~~~~-~~~~~~~~L~~-~~~v~~-~D~~G~G 106 (314)
T 3kxp_A 54 DIGRITLNVREKGS--------G--PLMLFFHGI--------------TSNSA-VFEPLMIRLSD-RFTTIA-VDQRGHG 106 (314)
T ss_dssp ECSSCEEEEEEECC--------S--SEEEEECCT--------------TCCGG-GGHHHHHTTTT-TSEEEE-ECCTTST
T ss_pred EECCEEEEEEecCC--------C--CEEEEECCC--------------CCCHH-HHHHHHHHHHc-CCeEEE-EeCCCcC
Confidence 45888888776532 2 788887642 11111 11122456666 799999 8888776
Q ss_pred cC
Q 007620 569 EG 570 (595)
Q Consensus 569 ~~ 570 (595)
.-
T Consensus 107 ~S 108 (314)
T 3kxp_A 107 LS 108 (314)
T ss_dssp TS
T ss_pred CC
Confidence 53
No 454
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=30.37 E-value=90 Score=28.48 Aligned_cols=57 Identities=25% Similarity=0.340 Sum_probs=35.0
Q ss_pred EECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCce
Q 007620 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 487 ~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~ 566 (595)
+...||.+|+....- .. |+||++|+. +.....+ ....+.|+.+ |.|+. +|.|.
T Consensus 14 ~~~~~g~~l~~~~~g--------~~--~~vv~lHG~--------------~~~~~~~-~~~~~~L~~~-~~vi~-~D~~G 66 (301)
T 3kda_A 14 YREVDGVKLHYVKGG--------QG--PLVMLVHGF--------------GQTWYEW-HQLMPELAKR-FTVIA-PDLPG 66 (301)
T ss_dssp EEEETTEEEEEEEEE--------SS--SEEEEECCT--------------TCCGGGG-TTTHHHHTTT-SEEEE-ECCTT
T ss_pred EEeeCCeEEEEEEcC--------CC--CEEEEECCC--------------CcchhHH-HHHHHHHHhc-CeEEE-EcCCC
Confidence 334599998866542 12 778887642 2211111 1235678888 99999 88888
Q ss_pred eecC
Q 007620 567 IGEG 570 (595)
Q Consensus 567 ~~~~ 570 (595)
.|.-
T Consensus 67 ~G~S 70 (301)
T 3kda_A 67 LGQS 70 (301)
T ss_dssp STTC
T ss_pred CCCC
Confidence 7753
No 455
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=30.02 E-value=37 Score=30.73 Aligned_cols=21 Identities=14% Similarity=0.061 Sum_probs=16.6
Q ss_pred hHHHhccCeEEEeCCCCceeecC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
.+.|+. ||.|+. ++.|..|.-
T Consensus 48 ~~~l~~-g~~v~~-~d~~G~G~s 68 (282)
T 3qvm_A 48 LPELEK-QFTVIV-FDYVGSGQS 68 (282)
T ss_dssp HHHHHT-TSEEEE-CCCTTSTTS
T ss_pred HHHHhc-CceEEE-EecCCCCCC
Confidence 467776 999999 888877753
No 456
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=29.95 E-value=70 Score=29.49 Aligned_cols=64 Identities=11% Similarity=0.077 Sum_probs=33.5
Q ss_pred ceEEEEEECC-CCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEE
Q 007620 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (595)
Q Consensus 481 ~~e~v~~~~~-DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl 559 (595)
+.+.+++.+. .|.+|..++ |+++ + |+||+.|+... .+....|.... ...++++.+||+|+
T Consensus 5 ~~~~~~~~s~~~~~~~~v~~--~p~~-~------~~v~llHG~~~---------~~~~~~w~~~~-~~~~~l~~~~~~vv 65 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQF--QGGG-P------HAVYLLDGLRA---------QDDYNGWDINT-PAFEEYYQSGLSVI 65 (280)
T ss_dssp CEEEEEEEETTTTEEEEEEE--ECCS-S------SEEEECCCTTC---------CSSSCHHHHHS-CHHHHHTTSSSEEE
T ss_pred eEEEEEEECcccCceeEEEE--cCCC-C------CEEEEECCCCC---------CCCcccccccC-cHHHHHhcCCeEEE
Confidence 4566777655 677777663 5544 1 46777653200 00011111100 11257888999999
Q ss_pred eCCCC
Q 007620 560 AGPSI 564 (595)
Q Consensus 560 ~~~~~ 564 (595)
. |+.
T Consensus 66 ~-pd~ 69 (280)
T 1dqz_A 66 M-PVG 69 (280)
T ss_dssp E-ECC
T ss_pred E-ECC
Confidence 9 543
No 457
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=29.82 E-value=83 Score=28.71 Aligned_cols=72 Identities=10% Similarity=0.040 Sum_probs=43.1
Q ss_pred EEEEEEecCCCcceEEEEeCCC---CceeeEecCCCC-CCCcCC--C-ceEEEEEECCCCcEEEEEEEcCCCCCCCCCC
Q 007620 440 KILTSKESKTEITQYHILSWPL---KKSSQITNFPHP-YPTLAS--L-QKEMIKYQRKDGVPLTATLYLPPGYDQSKDG 511 (595)
Q Consensus 440 ~l~~~~~s~~~p~~l~~~d~~~---~~~~~Lt~~~~~-~~~~~~--~-~~e~v~~~~~DG~~i~g~l~~P~~~~~~k~y 511 (595)
++++.........+|..+++.. ..++.++..-.. |..... + -+-.|++++.||..|...-+.|.++++++.|
T Consensus 160 ~~~vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~gpls~RvT~~~G~~v~~~nViP~~w~~g~ty 238 (241)
T 1n10_A 160 YLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKTEAEDVIPEGWKADTSY 238 (241)
T ss_dssp EEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSCEEEEEEESSSCEEEEEEEECSSCCSSEEE
T ss_pred eEEEEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCCCEEEEEEEeCCcEEEEccccCCCCCCCCEE
Confidence 4444444444344455444432 356666654211 211111 3 4667888999999999999999999987654
No 458
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=28.99 E-value=60 Score=34.19 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=27.7
Q ss_pred CCCceeeecCCCCCcccceEEccCCCEEEEEEec
Q 007620 18 LGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRV 51 (595)
Q Consensus 18 ~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~ 51 (595)
.|+.+++...|.+.....|.|||||+.|.+....
T Consensus 518 ~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQH 551 (592)
T 3zwu_A 518 TGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp TCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCeEEEEEeCCCCccCcCeeECCCCCEEEEEEEC
Confidence 6788887777888889999999999998665544
No 459
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=28.78 E-value=63 Score=28.23 Aligned_cols=53 Identities=11% Similarity=0.046 Sum_probs=29.7
Q ss_pred CCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCce
Q 007620 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 491 DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~ 566 (595)
++.+++.+++.|.+ + .. |+||++|+. ..... .+....+.|+. ||.|+. ++.|.
T Consensus 14 ~~~~l~~~~~~~~~--~--~~--p~vv~lHG~--------------g~~~~-~~~~~~~~l~~-~~~vv~-~d~~~ 66 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK--E--SR--ECLFLLHGS--------------GVDET-TLVPLARRIAP-TATLVA-ARGRI 66 (223)
T ss_dssp CSSSSCEEEESTTS--S--CC--CEEEEECCT--------------TBCTT-TTHHHHHHHCT-TSEEEE-ECCSE
T ss_pred cCCCceEEEeCCCC--C--CC--CEEEEEecC--------------CCCHH-HHHHHHHhcCC-CceEEE-eCCCC
Confidence 45677777665542 2 22 888887642 11101 11112356664 999999 77665
No 460
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=28.72 E-value=3.4e+02 Score=24.83 Aligned_cols=239 Identities=11% Similarity=0.015 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcccc
Q 007620 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLN 86 (595)
Q Consensus 7 ~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~~ 86 (595)
|+..|.. +...+... ........+... +..|.+.... ..|+.++.+ |+..........
T Consensus 80 l~~~d~~----g~~~~~~~--~~~~~~~~~~~~--~~~l~v~t~~----------~~l~~~d~~-g~~~~~~~~~~~--- 137 (330)
T 3hxj_A 80 VYAINPD----GTEKWRFD--TKKAIVSDFTIF--EDILYVTSMD----------GHLYAINTD-GTEKWRFKTKKA--- 137 (330)
T ss_dssp EEEECCC----GGGGGGSC--C-----CCEEEE--TTEEEEECTT----------SEEEEECTT-SCEEEEEECSSC---
T ss_pred EEEECCC----CcEEEEEE--CCCCcccCceEE--CCEEEEEecC----------CEEEEEcCC-CCEEEEEcCCCc---
Q ss_pred ccccceEEecCCcEEEEEecCCCCCCCCccccCCCCeeeecCcccccccccccccccCcCCccceEEeecceEEEEcCCC
Q 007620 87 AVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG 166 (595)
Q Consensus 87 ~~~~~~~Wspdg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g 166 (595)
.+..+...++|..++-. ....|+.++..|
T Consensus 138 -~~~~~~~~~~g~l~vgt--------------------------------------------------~~~~l~~~d~~g 166 (330)
T 3hxj_A 138 -IYATPIVSEDGTIYVGS--------------------------------------------------NDNYLYAINPDG 166 (330)
T ss_dssp -CCSCCEECTTSCEEEEC--------------------------------------------------TTSEEEEECTTS
T ss_pred -eeeeeEEcCCCEEEEEc--------------------------------------------------CCCEEEEECCCC
Q ss_pred --CeeecCCCCeeeeeEECCCCCeEEEEEcccCccccccCcccceeEEEEcCCCceEEEeccCCCCccCCccccccccCC
Q 007620 167 --TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGM 244 (595)
Q Consensus 167 --~~~~lt~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 244 (595)
..+.-........+...++|. |++.. . .|+.+|.++.......... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~d~~g~-l~v~t---~------------~l~~~d~~g~~~~~~~~~~-------------~~~ 217 (330)
T 3hxj_A 167 TEKWRFKTNDAITSAASIGKDGT-IYFGS---D------------KVYAINPDGTEKWNFYAGY-------------WTV 217 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTCC-EEEES---S------------SEEEECTTSCEEEEECCSS-------------CCC
T ss_pred CEeEEEecCCCceeeeEEcCCCE-EEEEe---C------------EEEEECCCCcEEEEEccCC-------------cce
Q ss_pred CCceeecCCCeeEEEEEeecCCCcccccCCcceEEeccCCCCCCCCceeccccCccccceeecCCCcEEEEEEeecccce
Q 007620 245 RSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQT 324 (595)
Q Consensus 245 ~~~~wspdg~~~l~~~~~~d~~~~~~~~~~~~~~~~~d~~~~~g~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~ 324 (595)
..+...++|. |+.. .....++.++. ++...............+...++|..++.....
T Consensus 218 ~~~~~~~~g~--l~v~------------t~~~gl~~~~~---~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~g----- 275 (330)
T 3hxj_A 218 TRPAISEDGT--IYVT------------SLDGHLYAINP---DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDG----- 275 (330)
T ss_dssp SCCEECTTSC--EEEE------------ETTTEEEEECT---TSCEEEEEECSSCCCSCCEECTTSCEEEECTTC-----
T ss_pred eceEECCCCe--EEEE------------cCCCeEEEECC---CCCEeEEeeCCCCccccceEcCCCeEEEecCCC-----
Q ss_pred EEEEEeCCCCCCCcEEEeecccccccCCCCCCCeeeCCCCCEEEE
Q 007620 325 RTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIA 369 (595)
Q Consensus 325 ~L~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dg~~l~~ 369 (595)
.|+.+|.++.......+-...+...+.+..+.++.-+.+|...+.
T Consensus 276 gl~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 276 HLYAINPDGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYAL 320 (330)
T ss_dssp EEEEECTTSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEE
T ss_pred CEEEECCCCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEE
No 461
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=27.07 E-value=2.2e+02 Score=30.45 Aligned_cols=80 Identities=11% Similarity=-0.056 Sum_probs=48.6
Q ss_pred eeeEEEecCCCCCCCCce-eeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCc
Q 007620 5 TGIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~-~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~ 83 (595)
..|...|+. +|+.+ ++. +. .......++++|..|++ .. ....|+++|+++|+...-......
T Consensus 457 g~l~A~D~~----tG~~~W~~~-~~--~~~~~g~~~~~g~~v~~-g~---------~dg~l~a~D~~tG~~lw~~~~~~~ 519 (677)
T 1kb0_A 457 GRLLAWDPV----AQKAAWSVE-HV--SPWNGGTLTTAGNVVFQ-GT---------ADGRLVAYHAATGEKLWEAPTGTG 519 (677)
T ss_dssp EEEEEEETT----TTEEEEEEE-ES--SSCCCCEEEETTTEEEE-EC---------TTSEEEEEETTTCCEEEEEECSSC
T ss_pred cEEEEEeCC----CCcEEeecC-CC--CCCcCcceEeCCCEEEE-EC---------CCCcEEEEECCCCceeeeeeCCCC
Confidence 457788987 67654 333 22 12345567788886644 43 246899999999986443333321
Q ss_pred cccccccceEEecCCcEEEEE
Q 007620 84 CLNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 84 ~~~~~~~~~~Wspdg~~l~~~ 104 (595)
. ....+.|+.||+..+..
T Consensus 520 ~---~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 520 V---VAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp C---CSCCEEEEETTEEEEEE
T ss_pred c---ccCCEEEEeCCEEEEEE
Confidence 1 12356788999865554
No 462
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=26.36 E-value=5.6e+02 Score=26.53 Aligned_cols=58 Identities=16% Similarity=0.032 Sum_probs=35.4
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCC-----cccceEEc----cCCC--EEEEEEecccccccCCCceEEEEEECCCCc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGA-----KINFVSWS----PDGK--RIAFSVRVDEEDNVSSCKLRVWIADAETGE 73 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~-----~~~~~~~S----PDG~--~laf~~~~~~~~~~~~~~~~L~v~d~~~g~ 73 (595)
..|+-+|.. +|+.+.-.++.... ..+.|.+. .||+ .++|... ....||++|.++|+
T Consensus 291 ~~v~AlD~~----TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~---------~~G~l~~lD~~tG~ 357 (582)
T 1flg_A 291 SGQVGVDPS----SGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHAD---------RNGFFYVVDRSNGK 357 (582)
T ss_dssp SEEEEECTT----TCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEEC---------TTSEEEEEETTTCC
T ss_pred ceEEEEeCC----CCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEEC---------CCceEEEEECCCCC
Confidence 467888887 78776554332211 13456554 4787 3444442 34689999998887
Q ss_pred eE
Q 007620 74 AK 75 (595)
Q Consensus 74 ~~ 75 (595)
..
T Consensus 358 ~l 359 (582)
T 1flg_A 358 LQ 359 (582)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 463
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=25.92 E-value=2e+02 Score=30.76 Aligned_cols=81 Identities=14% Similarity=-0.008 Sum_probs=47.9
Q ss_pred eeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCcc
Q 007620 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (595)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~ 84 (595)
-.|...|+. +|+.+.-..+.. ......++..|..| |+.. ....|+.+|.++|+..--+......
T Consensus 455 g~l~A~D~~----tG~~~W~~~~~~--~~~~g~~~tagglv-f~gt---------~dg~l~a~D~~tG~~lw~~~~~~~~ 518 (689)
T 1yiq_A 455 GKLIAWDPV----KQQAAWEVPYVT--IFNGGTLSTAGNLV-FEGS---------ADGRVIAYAADTGEKLWEQPAASGV 518 (689)
T ss_dssp EEEEEEETT----TTEEEEEEEESS--SCCCCEEEETTTEE-EEEC---------TTSEEEEEETTTCCEEEEEECSSCC
T ss_pred eeEEEEECC----CCCeEeEccCCC--CccCccceECCCEE-EEEC---------CCCcEEEEECCCCccceeeeCCCCc
Confidence 457888998 776553332222 23344677777754 5543 2367999999999864333323211
Q ss_pred ccccccceEEecCCcEEEEE
Q 007620 85 LNAVFGSFVWVNNSTLLIFT 104 (595)
Q Consensus 85 ~~~~~~~~~Wspdg~~l~~~ 104 (595)
....+.|+.||++.+..
T Consensus 519 ---~~~p~ty~~~G~qyv~~ 535 (689)
T 1yiq_A 519 ---MAAPVTYSVDGEQYVTF 535 (689)
T ss_dssp ---CSCCEEEEETTEEEEEE
T ss_pred ---ccCceEEEECCEEEEEE
Confidence 12356789999965443
No 464
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=25.63 E-value=1e+02 Score=29.87 Aligned_cols=63 Identities=16% Similarity=0.152 Sum_probs=35.8
Q ss_pred cccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCceEecccCCCccc--cccccceEEecC---CcEEEEE
Q 007620 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL--NAVFGSFVWVNN---STLLIFT 104 (595)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~~~~lt~~~~~~~--~~~~~~~~Wspd---g~~l~~~ 104 (595)
......|.|||++| |++.+ ...|++++.++...+.+...+.... ..+...+.++|| +..|++.
T Consensus 19 ~P~~i~~~pdG~~l-~V~e~---------~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 19 HPWALAFLPDNHGM-LITLR---------GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SEEEEEECSTTCCE-EEEET---------TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CcEEEEEcCCCCEE-EEEeC---------CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 35678999999864 44433 2579999865332222322221100 112347899997 6667665
No 465
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=25.43 E-value=82 Score=32.91 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=26.0
Q ss_pred CCCceeeecCCCCCcccceEEccCCCEEEEEEec
Q 007620 18 LGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRV 51 (595)
Q Consensus 18 ~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~ 51 (595)
+|+.+++..-+.......+.||||++.|+.....
T Consensus 518 tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 518 TGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp TCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 6777777655555578899999999988776654
No 466
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=25.14 E-value=1.2e+02 Score=28.08 Aligned_cols=18 Identities=11% Similarity=-0.049 Sum_probs=14.2
Q ss_pred hHHHhccCeEEEeCCCCcee
Q 007620 548 SLIFLARRFAVLAGPSIPII 567 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~ 567 (595)
.+.|+. ||.|+. +|.|..
T Consensus 87 ~~~L~~-g~~vi~-~D~~G~ 104 (306)
T 2r11_A 87 IADWSS-KYRTYA-VDIIGD 104 (306)
T ss_dssp HHHHHH-HSEEEE-ECCTTS
T ss_pred HHHHhc-CCEEEE-ecCCCC
Confidence 456776 999999 888776
No 467
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=24.72 E-value=12 Score=33.39 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=13.9
Q ss_pred hHHHhccCeEEEeCCCCce
Q 007620 548 SLIFLARRFAVLAGPSIPI 566 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~ 566 (595)
.+.|+..||+|+. |+.|.
T Consensus 42 ~~~l~~~~~~v~~-P~~~g 59 (210)
T 4h0c_A 42 QKVLKLDEMAIYA-PQATN 59 (210)
T ss_dssp GGTSSCTTEEEEE-ECCGG
T ss_pred HHHhCCCCeEEEe-ecCCC
Confidence 4677889999999 66554
No 468
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=24.45 E-value=1.1e+02 Score=27.30 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=16.3
Q ss_pred hHHHhccCeEEEeCCCCceeecC
Q 007620 548 SLIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
.+.|+. ||.|+. ++.|..|.-
T Consensus 43 ~~~L~~-~~~vi~-~d~~G~G~s 63 (278)
T 3oos_A 43 ANPFTD-HYSVYL-VNLKGCGNS 63 (278)
T ss_dssp TGGGGG-TSEEEE-ECCTTSTTS
T ss_pred HHHhhc-CceEEE-EcCCCCCCC
Confidence 356776 999999 888887753
No 469
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=24.32 E-value=4.1e+02 Score=24.20 Aligned_cols=68 Identities=12% Similarity=-0.141 Sum_probs=39.9
Q ss_pred eeeeEEEecCCCCCCCCceeeecCCCCCcccceEEccCCCEEEEEEecccccccCCCceEEEEEECCCCc---eEecccC
Q 007620 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFES 80 (595)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~lt~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~L~v~d~~~g~---~~~lt~~ 80 (595)
..+++++|+. +++-..+..++.. ........-+++ |+........ .....+|++|+.+++ .+.+...
T Consensus 30 ~~~~~~~d~~----~~~W~~~~~~p~~-r~~~~~~~~~~~-l~v~GG~~~~----~~~~~~~~~d~~~~~~~~W~~~~~~ 99 (301)
T 2vpj_A 30 IDVVEKYDPK----TQEWSFLPSITRK-RRYVASVSLHDR-IYVIGGYDGR----SRLSSVECLDYTADEDGVWYSVAPM 99 (301)
T ss_dssp CCCEEEEETT----TTEEEECCCCSSC-CBSCEEEEETTE-EEEECCBCSS----CBCCCEEEEETTCCTTCCCEEECCC
T ss_pred eeEEEEEcCC----CCeEEeCCCCChh-hccccEEEECCE-EEEEcCCCCC----ccCceEEEEECCCCCCCeeEECCCC
Confidence 4578888887 6665666655543 333444444554 4443322110 234679999999888 7777544
Q ss_pred C
Q 007620 81 P 81 (595)
Q Consensus 81 ~ 81 (595)
+
T Consensus 100 p 100 (301)
T 2vpj_A 100 N 100 (301)
T ss_dssp S
T ss_pred C
Confidence 3
No 470
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=24.14 E-value=72 Score=31.84 Aligned_cols=30 Identities=20% Similarity=0.465 Sum_probs=20.6
Q ss_pred EEEECCCCc--EEEEEEEcCCCCCCCCCCCCcEEEEec
Q 007620 485 IKYQRKDGV--PLTATLYLPPGYDQSKDGPLPCLFWAY 520 (595)
Q Consensus 485 v~~~~~DG~--~i~g~l~~P~~~~~~k~y~lP~vv~~y 520 (595)
|+++. .|. .+.+.|++|.+ +.|.|+||.++
T Consensus 114 I~v~~-~g~s~sf~~~i~lP~g-----~~P~Pvii~~~ 145 (433)
T 4g4g_A 114 VRVTV-GSKSISFSASIRKPSG-----AGPFPAIIGIG 145 (433)
T ss_dssp EEEEE-TTEEEEEEEEEECCSS-----SCCEEEEEEES
T ss_pred EEEEc-CCeeEEEEEEEECCCC-----CCCccEEEEEC
Confidence 45543 554 56999999976 23569999753
No 471
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=24.10 E-value=1.4e+02 Score=26.95 Aligned_cols=60 Identities=13% Similarity=0.131 Sum_probs=34.6
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceee
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~ 568 (595)
..||.+|+....-|.+ + .. |.||++|+ .+.....+ ......|+ ++|.|+. +|.|..|
T Consensus 8 ~~~g~~l~y~~~g~~~--~--~~--~~vvllHG--------------~~~~~~~~-~~~~~~L~-~~~~vi~-~D~~G~G 64 (266)
T 2xua_A 8 AVNGTELHYRIDGERH--G--NA--PWIVLSNS--------------LGTDLSMW-APQVAALS-KHFRVLR-YDTRGHG 64 (266)
T ss_dssp ECSSSEEEEEEESCSS--S--CC--CEEEEECC--------------TTCCGGGG-GGGHHHHH-TTSEEEE-ECCTTST
T ss_pred EECCEEEEEEEcCCcc--C--CC--CeEEEecC--------------ccCCHHHH-HHHHHHHh-cCeEEEE-ecCCCCC
Confidence 3589999988774421 0 12 77787663 11111111 12245665 4699999 8888877
Q ss_pred cCC
Q 007620 569 EGD 571 (595)
Q Consensus 569 ~~~ 571 (595)
.-.
T Consensus 65 ~S~ 67 (266)
T 2xua_A 65 HSE 67 (266)
T ss_dssp TSC
T ss_pred CCC
Confidence 533
No 472
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=22.74 E-value=80 Score=27.29 Aligned_cols=16 Identities=6% Similarity=-0.004 Sum_probs=11.8
Q ss_pred hHHHhccCeEEEeCCCCc
Q 007620 548 SLIFLARRFAVLAGPSIP 565 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~ 565 (595)
.+.|+ .||.|+. ++.|
T Consensus 36 ~~~l~-~~~~v~~-~~~~ 51 (209)
T 3og9_A 36 AEMIA-PSHPILS-IRGR 51 (209)
T ss_dssp HHHHS-TTCCEEE-ECCS
T ss_pred HHhcC-CCceEEE-ecCC
Confidence 35666 8999998 7755
No 473
>2f40_A Hypothetical protein PF1455; protein structure prediction, residual dipolar couplings, PY furious, simulated annealing, structural genomics; NMR {Pyrococcus furiosus} SCOP: i.11.1.1
Probab=21.76 E-value=29 Score=25.64 Aligned_cols=30 Identities=7% Similarity=-0.083 Sum_probs=23.3
Q ss_pred HHhccCeEEEeCCCCceeecCCCCCCchhhHhhhcccce
Q 007620 550 IFLARRFAVLAGPSIPIIGEGDKLPNDRYLILSYLNRVR 588 (595)
Q Consensus 550 ~la~~GY~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (595)
=||.+||+||. .++.+.+.+++.++++..+
T Consensus 43 gYAk~g~ViFD---------e~kl~~e~lLeelkPEVi~ 72 (96)
T 2f40_A 43 PYAKVAEVVID---------DSKVNIEELKEKLKGEVIE 72 (96)
T ss_dssp TTTTCCEEECC---------BCSCSHHHHHHHTTTCSSC
T ss_pred cccccceEEEC---------cccCCHHHHHHHcChhhcc
Confidence 57889999998 5677778888888777654
No 474
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=21.68 E-value=1.1e+02 Score=27.25 Aligned_cols=56 Identities=18% Similarity=0.180 Sum_probs=32.1
Q ss_pred CCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCceeec
Q 007620 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (595)
Q Consensus 490 ~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~~~~~ 569 (595)
.||.+|+....-++ .. |+||++|+ .+.....+ ....+.|+ ++|.|+. +|.|..|.
T Consensus 6 ~~g~~l~~~~~g~~------~~--~~vv~lHG--------------~~~~~~~~-~~~~~~L~-~~~~v~~-~D~~G~G~ 60 (264)
T 3ibt_A 6 VNGTLMTYSESGDP------HA--PTLFLLSG--------------WCQDHRLF-KNLAPLLA-RDFHVIC-PDWRGHDA 60 (264)
T ss_dssp ETTEECCEEEESCS------SS--CEEEEECC--------------TTCCGGGG-TTHHHHHT-TTSEEEE-ECCTTCST
T ss_pred eCCeEEEEEEeCCC------CC--CeEEEEcC--------------CCCcHhHH-HHHHHHHH-hcCcEEE-EccccCCC
Confidence 37888776655332 12 77888764 22111111 12235664 5699999 88888775
Q ss_pred C
Q 007620 570 G 570 (595)
Q Consensus 570 ~ 570 (595)
-
T Consensus 61 S 61 (264)
T 3ibt_A 61 K 61 (264)
T ss_dssp T
T ss_pred C
Confidence 3
No 475
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=21.39 E-value=84 Score=30.79 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=18.0
Q ss_pred cEEEEEEEcCCCCCCCCCCCCcEEEEec
Q 007620 493 VPLTATLYLPPGYDQSKDGPLPCLFWAY 520 (595)
Q Consensus 493 ~~i~g~l~~P~~~~~~k~y~lP~vv~~y 520 (595)
..+...|++|.+-. .|.|+||.++
T Consensus 90 ~~~~~~i~lP~~~~----~p~Pvii~i~ 113 (375)
T 3pic_A 90 ISFTVTITYPSSGT----APYPAIIGYG 113 (375)
T ss_dssp EEEEEEEECCSSSC----SSEEEEEEET
T ss_pred eEEEEEEECCCCCC----CCccEEEEEC
Confidence 46899999998632 3669999754
No 476
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=21.20 E-value=49 Score=31.09 Aligned_cols=57 Identities=9% Similarity=-0.046 Sum_probs=31.0
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCC-CCcccCCCCchhHHHhcc--CeEEEeCCCCc
Q 007620 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGS-PNEFSGMTPTSSLIFLAR--RFAVLAGPSIP 565 (595)
Q Consensus 489 ~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~gg-p~~~~~~~~~~~q~la~~--GY~Vl~~~~~~ 565 (595)
+..+...--+..+|+ .+++.+ |+||+.|+- |+ ...|. ...+.|+.+ ++.|+. |..|
T Consensus 46 ~~~~~~~l~y~~~p~--~~~~~~--plVI~LHG~------------G~~~~~~~----~~~~~l~~~~~~~~~v~-P~Ap 104 (285)
T 4fhz_A 46 ADIMTRKLTFGRRGA--APGEAT--SLVVFLHGY------------GADGADLL----GLAEPLAPHLPGTAFVA-PDAP 104 (285)
T ss_dssp --CCCCCCCEEEEES--CTTCCS--EEEEEECCT------------TBCHHHHH----TTHHHHGGGSTTEEEEE-ECCS
T ss_pred cccccccceeecCCC--CCCCCC--cEEEEEcCC------------CCCHHHHH----HHHHHHHHhCCCeEEEe-cCCC
Confidence 334445555566676 444545 999998742 11 11221 123566655 899988 6655
Q ss_pred e
Q 007620 566 I 566 (595)
Q Consensus 566 ~ 566 (595)
.
T Consensus 105 ~ 105 (285)
T 4fhz_A 105 E 105 (285)
T ss_dssp E
T ss_pred c
Confidence 4
No 477
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=21.09 E-value=56 Score=30.55 Aligned_cols=21 Identities=5% Similarity=-0.007 Sum_probs=16.3
Q ss_pred hhHHHhccCeEEEeCCCCceee
Q 007620 547 SSLIFLARRFAVLAGPSIPIIG 568 (595)
Q Consensus 547 ~~q~la~~GY~Vl~~~~~~~~~ 568 (595)
..+.|+++||.|+. ++.|..|
T Consensus 31 ~~~~L~~~G~~v~~-~d~~g~g 51 (285)
T 1ex9_A 31 IPSALRRDGAQVYV-TEVSQLD 51 (285)
T ss_dssp HHHHHHHTTCCEEE-ECCCSSS
T ss_pred HHHHHHhCCCEEEE-EeCCCCC
Confidence 35789999999999 7766544
No 478
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=20.94 E-value=41 Score=30.91 Aligned_cols=20 Identities=15% Similarity=0.114 Sum_probs=15.0
Q ss_pred HHHhccCeEEEeCCCCceeecC
Q 007620 549 LIFLARRFAVLAGPSIPIIGEG 570 (595)
Q Consensus 549 q~la~~GY~Vl~~~~~~~~~~~ 570 (595)
..|+ +||.|+. +|.|..|.-
T Consensus 64 ~~L~-~~~~vi~-~D~~G~G~S 83 (292)
T 3l80_A 64 DKLP-DSIGILT-IDAPNSGYS 83 (292)
T ss_dssp TTSC-TTSEEEE-ECCTTSTTS
T ss_pred HHHh-hcCeEEE-EcCCCCCCC
Confidence 3454 7999999 888877753
No 479
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=20.72 E-value=68 Score=28.03 Aligned_cols=13 Identities=23% Similarity=0.140 Sum_probs=10.3
Q ss_pred hHHHhccCeEEEeCC
Q 007620 548 SLIFLARRFAVLAGP 562 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~ 562 (595)
.+.|+. ||.|+. +
T Consensus 58 ~~~l~~-g~~v~~-~ 70 (226)
T 2h1i_A 58 AEIVDS-EASVLS-V 70 (226)
T ss_dssp HHHHHT-TSCEEE-E
T ss_pred HHHhcc-CceEEE-e
Confidence 467777 999999 5
No 480
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=20.58 E-value=27 Score=31.36 Aligned_cols=19 Identities=5% Similarity=0.072 Sum_probs=14.7
Q ss_pred hHHHhccCeEEEeCCCCcee
Q 007620 548 SLIFLARRFAVLAGPSIPII 567 (595)
Q Consensus 548 ~q~la~~GY~Vl~~~~~~~~ 567 (595)
.+.|..+||.|+. ++.|+.
T Consensus 29 ~~~l~~~g~~v~~-~d~p~~ 47 (243)
T 1ycd_A 29 RKLLKKANVQCDY-IDAPVL 47 (243)
T ss_dssp HHHHHHTTCEEEE-ECCSEE
T ss_pred HHHHhhcceEEEE-cCCCee
Confidence 3566777999999 888854
No 481
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=20.14 E-value=1.5e+02 Score=26.93 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=32.9
Q ss_pred EEECCCCcEEEEEEEcCCCCCCCCCCCCcEEEEeccCCccCcccCCcccCCCCcccCCCCchhHHHhccCeEEEeCCCCc
Q 007620 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (595)
Q Consensus 486 ~~~~~DG~~i~g~l~~P~~~~~~k~y~lP~vv~~y~~~~~~~~~~~~~~ggp~~~~~~~~~~~q~la~~GY~Vl~~~~~~ 565 (595)
.+...||.+|.....-+ . |+||++|+-. ++...|. .....|+++ |.|+. ++.|
T Consensus 12 ~~~~~~g~~l~~~~~g~--------~--~~vv~lHG~~-----------~~~~~~~----~~~~~L~~~-~~vi~-~D~~ 64 (302)
T 1mj5_A 12 KFIEIKGRRMAYIDEGT--------G--DPILFQHGNP-----------TSSYLWR----NIMPHCAGL-GRLIA-CDLI 64 (302)
T ss_dssp EEEEETTEEEEEEEESC--------S--SEEEEECCTT-----------CCGGGGT----TTGGGGTTS-SEEEE-ECCT
T ss_pred eEEEECCEEEEEEEcCC--------C--CEEEEECCCC-----------CchhhhH----HHHHHhccC-CeEEE-EcCC
Confidence 34456899888766421 2 7788876420 1111121 123456655 79998 8888
Q ss_pred eeecC
Q 007620 566 IIGEG 570 (595)
Q Consensus 566 ~~~~~ 570 (595)
..|.-
T Consensus 65 G~G~S 69 (302)
T 1mj5_A 65 GMGDS 69 (302)
T ss_dssp TSTTS
T ss_pred CCCCC
Confidence 77653
Done!