BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007621
(595 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359484084|ref|XP_002274185.2| PREDICTED: uncharacterized protein LOC100242606 [Vitis vinifera]
Length = 564
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/578 (64%), Positives = 453/578 (78%), Gaps = 18/578 (3%)
Query: 16 MITQINHFLVFF--PVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVSLAESTQPPA 73
MI Q+NH+ V P S S F P+R+R F R + K+ ES+ P
Sbjct: 1 MICQLNHYGVVLRKPTSAHTLS--------FTPLRIRYFHCCRPANYLKL---ESSIP-- 47
Query: 74 SLVASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTR 133
RVSR+ RTEAQ+VLFDYLH TRS DAEH+SKNSP F+ LLSK+++ +DV R
Sbjct: 48 ---GRRVSRVVRTEAQDVLFDYLHCTRSFHLTDAEHMSKNSPHFLQKLLSKVENEQDVAR 104
Query: 134 SLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRS 193
SL +FLRYNPINEFEPFFESLGL+ SE+S LLPR+LMFLSDD V+++N+HVLCDYGI RS
Sbjct: 105 SLSKFLRYNPINEFEPFFESLGLAPSEISALLPRNLMFLSDDCVMIENYHVLCDYGIARS 164
Query: 194 KMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVL 253
+G+MY E IFR++ G+L SK+ AYE LGLS++TVIKLVSCCP LL+GGV+S+FV VL
Sbjct: 165 SIGRMYKEVQAIFRYELGLLGSKVRAYEGLGLSRSTVIKLVSCCPWLLVGGVNSQFVMVL 224
Query: 254 EKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGS 313
+++K LGF++DWIG YL GK SYNW ++ +T+DFL K+GY+E Q+++LFKTNP L+FEGS
Sbjct: 225 KRVKGLGFESDWIGGYLSGKSSYNWKRMHDTIDFLEKVGYSEEQMVSLFKTNPELLFEGS 284
Query: 314 GQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNM 373
G+K YVL GRLLKLG KM V SLF QNPQILS K VKNL QAVGFL EIGM ++DI ++
Sbjct: 285 GKKFYVLIGRLLKLGFKMKGVLSLFLQNPQILSKKCVKNLWQAVGFLFEIGMKVEDIVSI 344
Query: 374 VLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQN 433
V H +L+ SCSLKGP+TV LKVGRE LCQIIK+DP +L LASK+++ E V CQ+
Sbjct: 345 VSSHVQLLCSCSLKGPRTVLRSLKVGREGLCQIIKEDPSELLSLASKSKINSMEHVTCQS 404
Query: 434 PSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKR 493
PSK +EKT FLLRLGYVENS+E+ KALK FRGRGDQLQERFDCLVQAGLD NVV N++K+
Sbjct: 405 PSKHLEKTTFLLRLGYVENSDEMFKALKLFRGRGDQLQERFDCLVQAGLDCNVVSNMIKQ 464
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVA 553
AP VLNQ+K V+EKKID L+N L YPL+SVVAFP+YLCYD+ RIN R MYVWLR++G A
Sbjct: 465 APSVLNQTKYVIEKKIDCLRNCLGYPLQSVVAFPSYLCYDIERINLRFSMYVWLRDKGAA 524
Query: 554 KPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKS 591
K LSLSTILACSDA+F KYFVDVHPEGPA WE L+KS
Sbjct: 525 KSNLSLSTILACSDARFVKYFVDVHPEGPAQWERLRKS 562
>gi|224115418|ref|XP_002332130.1| predicted protein [Populus trichocarpa]
gi|222875180|gb|EEF12311.1| predicted protein [Populus trichocarpa]
Length = 577
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/580 (63%), Positives = 455/580 (78%), Gaps = 3/580 (0%)
Query: 16 MITQINHFLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVSLAESTQPPASL 75
MI Q+N LVF PV E + +KQN F ++V+ FCSSR + KVS + S Q +L
Sbjct: 1 MIAQVNKSLVFSPVDIEIS--YKKQNPFLSSLKVQCFCSSRSSQNAKVSHSGSVQSLVTL 58
Query: 76 VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSL 135
++RVSR+ART+AQ VLFDYLH TR+ + DAEHISKNSP F+ NLL+KID+ KDV R L
Sbjct: 59 HSTRVSRVARTDAQRVLFDYLHCTRNFDFNDAEHISKNSPHFIENLLTKIDNDKDVVRLL 118
Query: 136 MRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKM 195
+FLRYNPINEFEPFFESLGL SE+ +LP HLM+L D+++LL+NFHVLC+YGIPRSK+
Sbjct: 119 NKFLRYNPINEFEPFFESLGLRPSEVPSVLPPHLMYLGDNDMLLENFHVLCNYGIPRSKI 178
Query: 196 GKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEK 255
G+MY EA EIF ++ GVL KL AYENLGLSK TV+KLVSCCPSLLIGGVD FV VL +
Sbjct: 179 GRMYKEAIEIFGYNYGVLKLKLLAYENLGLSKTTVVKLVSCCPSLLIGGVDREFVNVLGR 238
Query: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315
L G KND IG YL K SY+W ++ +T+ FL K+GY+E Q +L KTNP LVFEGSG+
Sbjct: 239 LNRAGLKNDLIGGYLSAKESYDWKRLIDTIYFLDKVGYSEEQFRDLLKTNPVLVFEGSGK 298
Query: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
KVY+LFGRLLKLGLK+NE+YSLF+Q PQILS+K KNLL+ + L+ IGMG++DI+N++
Sbjct: 299 KVYLLFGRLLKLGLKVNEIYSLFTQYPQILSAKRAKNLLRGIHILLGIGMGVEDIANIIS 358
Query: 376 MHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPS 435
EL+ S +LKGP T+ + K ++SLCQI+ ++PL+LFHL SK+EV+ + + Q P+
Sbjct: 359 TQMELLCSAALKGPVTLRRQFKDKKDSLCQILMENPLELFHLDSKSEVESSKMLSSQGPT 418
Query: 436 KDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAP 495
+EKT FLLRLGYVENS+E+ +ALK FRGRGDQLQERFDC VQAGLD NVV + +K+AP
Sbjct: 419 NKLEKTAFLLRLGYVENSDEMARALKMFRGRGDQLQERFDCPVQAGLDCNVVSSFIKQAP 478
Query: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP 555
MVLNQ+KDV+EKKID L N C + S+VAFP+YLCYDM RIN R +MY WL+E+G AKP
Sbjct: 479 MVLNQTKDVIEKKIDCLTNLGC-SVNSLVAFPSYLCYDMERINLRFRMYTWLKEKGAAKP 537
Query: 556 TLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSNSS 595
LSLSTILACSDA+F KYFVDVHPEGPAMWESL+ +S SS
Sbjct: 538 KLSLSTILACSDARFIKYFVDVHPEGPAMWESLRNTSASS 577
>gi|356553729|ref|XP_003545205.1| PREDICTED: uncharacterized protein LOC100803162 [Glycine max]
Length = 564
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 298/515 (57%), Positives = 387/515 (75%)
Query: 79 RVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSLMRF 138
RVSRL R+EAQ L DY+HSTR + DAE+IS+NSP F+ +L+S ID DV RSL RF
Sbjct: 46 RVSRLLRSEAQHALMDYMHSTRGYTFSDAEYISENSPRFIESLVSMIDDKDDVLRSLERF 105
Query: 139 LRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKM 198
LRYNPINEFEPFFESLG+ SEL LP + FL+DD VLL NFH LC+YG+PR++MGK
Sbjct: 106 LRYNPINEFEPFFESLGIDPSELYLFLPHGMFFLADDHVLLQNFHALCNYGVPRNRMGKF 165
Query: 199 YVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKE 258
+ EA EIF + GVL SKL AYENLGL K+TV+KLV CCP LL+G V+ FV VL+ LK
Sbjct: 166 FKEAKEIFGYASGVLLSKLEAYENLGLRKSTVVKLVVCCPLLLVGDVNFEFVSVLDWLKR 225
Query: 259 LGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVY 318
+G ++DW+ YL +Y+W ++ + + FL+K+GY+E Q+ NLF+ NP L+ EG G+KVY
Sbjct: 226 IGIESDWMVNYLSCSRTYSWKRMLDAMLFLHKVGYSEEQMHNLFRENPKLLLEGFGRKVY 285
Query: 319 VLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHA 378
++FGRLLK+G++MN VYS F + P IL +K ++L+ + FL IGMG DI++++ +
Sbjct: 286 LVFGRLLKVGVEMNVVYSYFVEYPNILLNKCANDMLRVIDFLGAIGMGKDDITHILSKYM 345
Query: 379 ELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDV 438
L+ + SLKG KTVC +LKVG+ L QIIKDDPLKL LASK E K + +VD +P +
Sbjct: 346 HLLITRSLKGHKTVCQELKVGKADLYQIIKDDPLKLISLASKQEQKGNGKVDSHDPRNYL 405
Query: 439 EKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVL 498
EKT FLL+LGY+ENSEE+ KALK FRGRGDQLQERFDCLV+AGLD N V ++KRAPM+L
Sbjct: 406 EKTTFLLKLGYIENSEEMAKALKMFRGRGDQLQERFDCLVEAGLDYNSVIEMIKRAPMIL 465
Query: 499 NQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLS 558
+Q+K V++KKID+LKN L YPLE +V FP Y C+D+ +I R MY WL+ER PTL+
Sbjct: 466 SQNKAVIQKKIDFLKNVLDYPLEGLVGFPTYFCHDLDKIVERLSMYAWLKERNAVNPTLT 525
Query: 559 LSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSN 593
LSTI+A +D +F KYFV+VHP+G A+W+ LK+ SN
Sbjct: 526 LSTIIASNDKRFVKYFVNVHPQGSAIWKGLKRLSN 560
>gi|79478031|ref|NP_193700.2| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|332658810|gb|AEE84210.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 575
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 315/594 (53%), Positives = 408/594 (68%), Gaps = 51/594 (8%)
Query: 1 MLLSLNRKRVSGVSQMITQINHFLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQ 60
MLLS N++RV + MI+ +N+ + F + + +Q+ A F+ + + S+ ++RLT+Q
Sbjct: 32 MLLSRNQRRVHKLLNMISNLNYCITFSSIPRQNP--VQRLKAVFVRINL-SYNNTRLTYQ 88
Query: 61 PKVSLAESTQPPASLVASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLN 120
EHISKNSP F+
Sbjct: 89 ----------------------------------------------LEHISKNSPCFMST 102
Query: 121 LLSKIDSG-KDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLL 179
LLSKID KDV++ L +FLRYNPINEFEPFFESLGL E LPR LMFLSDD ++
Sbjct: 103 LLSKIDDNQKDVSKGLTKFLRYNPINEFEPFFESLGLCPYEFETFLPRKLMFLSDDGIMF 162
Query: 180 DNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPS 239
+NFH LC+YGIPR K+G+MY EA EIFR++ G+LA KL YENLGLSK TVIKLV+ CP
Sbjct: 163 ENFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLSKATVIKLVTSCPL 222
Query: 240 LLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLL 299
LL+GG+D+ F V++KLK L DW+GRYL + +Y+W ++ ET++FL K+G E +L
Sbjct: 223 LLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIEFLDKVGCKEEKLS 282
Query: 300 NLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGF 359
+L KT PALV EGSG+K YVLFGRL K GL++NE+Y LF NP++LS K VKN+ + + F
Sbjct: 283 SLLKTYPALVIEGSGKKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDF 342
Query: 360 LIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLAS 419
LI I M + I+ ++L H EL+GSCSL P+T C L V ++ LC+I+K +PL+LF S
Sbjct: 343 LIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKEPLRLFCFVS 402
Query: 420 KTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQ 479
T+ + + + ++ K +EKTEFLLRLGYVENS+E+ KALKQFRGRGDQLQERFDCLV+
Sbjct: 403 TTKKRKSKPLS-EDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVK 461
Query: 480 AGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINH 539
AGL+ NVV I++ APM+LN SKDV+EKKI L L YP+ES+V FPAYLCYDM RI+H
Sbjct: 462 AGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHH 521
Query: 540 RCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSN 593
R MY+WLRER AKP LS STIL C DA+F KYFV+VHPEGPA+WES+ +SS
Sbjct: 522 RFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWESINQSST 575
>gi|297804174|ref|XP_002869971.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp.
lyrata]
gi|297315807|gb|EFH46230.1| hypothetical protein ARALYDRAFT_914700 [Arabidopsis lyrata subsp.
lyrata]
Length = 550
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 312/594 (52%), Positives = 405/594 (68%), Gaps = 51/594 (8%)
Query: 1 MLLSLNRKRVSGVSQMITQINHFLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQ 60
MLL ++RV + MI+ +N+ + F P+ + +Q+ A F+ + + S+ ++RLT+Q
Sbjct: 7 MLLCREQRRVHKLLNMISNLNNCIAFSPIPRQNQ--VQRLKAVFVRINL-SYNNTRLTYQ 63
Query: 61 PKVSLAESTQPPASLVASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLN 120
EHISKNSP F+
Sbjct: 64 ----------------------------------------------LEHISKNSPCFMST 77
Query: 121 LLSKIDSG-KDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLL 179
LLSKID KDV+R L +FLRYNPINEFEPFFESLGL E LP+ LMFLSDD ++
Sbjct: 78 LLSKIDDNHKDVSRGLTKFLRYNPINEFEPFFESLGLCPYEFETFLPQKLMFLSDDGIMF 137
Query: 180 DNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPS 239
+NFH LC+YGIPR K+G MY EA EIFR++ G+LA KL YENLGLSK TVIKLV+ CP
Sbjct: 138 ENFHALCNYGIPRGKIGHMYKEAREIFRYESGLLAMKLRDYENLGLSKATVIKLVTSCPL 197
Query: 240 LLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLL 299
LL+GG+D+ F V++KLK L DW+GRYL + +Y+W ++ ET++FL K+G + L
Sbjct: 198 LLVGGIDAEFASVVDKLKGLQVGCDWLGRYLSDRRTYSWRRILETIEFLDKVGCKDENLS 257
Query: 300 NLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGF 359
+L KT PALV EGSG+K YVLFGRL K+GL++NE+Y LF NP++LS K VKN+ + + F
Sbjct: 258 SLLKTYPALVIEGSGKKFYVLFGRLFKVGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDF 317
Query: 360 LIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLAS 419
LI I M + I+ ++L H EL+GSCSL P+T C L V ++ LCQ++K +PL+LF S
Sbjct: 318 LIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVRQDELCQLLKKEPLRLFSFVS 377
Query: 420 KTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQ 479
T+ + + + ++ K +EKT FLLRLGYVENS+E+ KALKQFRGRGDQLQERFDCLV+
Sbjct: 378 TTKKRKSKPLS-EDSRKYLEKTAFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVK 436
Query: 480 AGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINH 539
AGL+ NVV I++ APM+LN SKDV+EKKI L L YP+ES+V FPAYLCYDM RI+H
Sbjct: 437 AGLNHNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHH 496
Query: 540 RCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSN 593
R MY+WLRER AKP LS STIL C DA+F KYFV+VHPEGPA+WES+ +SS
Sbjct: 497 RFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWESINQSST 550
>gi|3250674|emb|CAA19682.1| putative protein [Arabidopsis thaliana]
gi|7268761|emb|CAB78967.1| putative protein [Arabidopsis thaliana]
Length = 557
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 304/594 (51%), Positives = 394/594 (66%), Gaps = 69/594 (11%)
Query: 1 MLLSLNRKRVSGVSQMITQINHFLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQ 60
MLLS N++RV + MI+ +N+ + F + + +Q+ A F+ + + S+ ++RLT+Q
Sbjct: 32 MLLSRNQRRVHKLLNMISNLNYCITFSSIPRQNP--VQRLKAVFVRINL-SYNNTRLTYQ 88
Query: 61 PKVSLAESTQPPASLVASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLN 120
EHISKNSP F+
Sbjct: 89 ----------------------------------------------LEHISKNSPCFMST 102
Query: 121 LLSKIDSG-KDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLL 179
LLSKID KDV++ L +FLRYNPINEFEPFFESLGL E LPR LMFLSDD ++
Sbjct: 103 LLSKIDDNQKDVSKGLTKFLRYNPINEFEPFFESLGLCPYEFETFLPRKLMFLSDDGIMF 162
Query: 180 DNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPS 239
+NFH LC+YGIPR K+G+MY EA EIFR++ G+LA KL YENLGLSK TVIKLV+ CP
Sbjct: 163 ENFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLSKATVIKLVTSCPL 222
Query: 240 LLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLL 299
LL+GG+D+ F V++KLK L DW+GRYL + +Y+W ++ ET++FL K+G E +L
Sbjct: 223 LLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIEFLDKVGCKEEKLS 282
Query: 300 NLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGF 359
+L KT PALV EGSG+K YVLF NP++LS K VKN+ + + F
Sbjct: 283 SLLKTYPALVIEGSGKKFYVLF------------------DNPEMLSDKCVKNIQKTLDF 324
Query: 360 LIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLAS 419
LI I M + I+ ++L H EL+GSCSL P+T C L V ++ LC+I+K +PL+LF S
Sbjct: 325 LIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKEPLRLFCFVS 384
Query: 420 KTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQ 479
T+ + + + ++ K +EKTEFLLRLGYVENS+E+ KALKQFRGRGDQLQERFDCLV+
Sbjct: 385 TTKKRKSKPLS-EDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVK 443
Query: 480 AGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINH 539
AGL+ NVV I++ APM+LN SKDV+EKKI L L YP+ES+V FPAYLCYDM RI+H
Sbjct: 444 AGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHH 503
Query: 540 RCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSN 593
R MY+WLRER AKP LS STIL C DA+F KYFV+VHPEGPA+WES+ +SS
Sbjct: 504 RFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWESINQSST 557
>gi|357493099|ref|XP_003616838.1| hypothetical protein MTR_5g084810 [Medicago truncatula]
gi|355518173|gb|AES99796.1| hypothetical protein MTR_5g084810 [Medicago truncatula]
Length = 592
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/575 (45%), Positives = 376/575 (65%), Gaps = 9/575 (1%)
Query: 23 FLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKV-SLAESTQPPASLVASRVS 81
F ++ P S + S QN F+ R SS ++ + + + ++STQ PA +
Sbjct: 14 FFLYNPNSTPQNSNFSHQNPNFL----RQNPSSSISFKNSILNCSKSTQIPALSPPIYIK 69
Query: 82 RLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKI---DSGKDVTRSLMRF 138
R + +AQ LF+YLH T++ + DAE ISKNSP F+ L+SKI D G DV R+L R+
Sbjct: 70 RATKIQAQRALFEYLHYTQNYTFSDAEFISKNSPHFIDFLISKINIPDDG-DVFRALSRY 128
Query: 139 LRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKM 198
L Y+PINEFEPF ESLG++ ++L LP+ FL DD VL+DNFHVLC +G+PR++M K+
Sbjct: 129 LMYHPINEFEPFLESLGINHTKLEKFLPKGCYFLCDDSVLVDNFHVLCYHGVPRNRMAKI 188
Query: 199 YVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKE 258
Y EA EIF + GVL K AYE+LGLSK+++IKL CCP LL+G VDS FV VL+ LK
Sbjct: 189 YTEAREIFGYGNGVLEKKFQAYEDLGLSKSSLIKLFVCCPLLLVGDVDSEFVVVLDWLKR 248
Query: 259 LGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVY 318
+G ++ W + +Y+W ++ ETL+F +++GY+E + +LFK +P L+ EG G+K+Y
Sbjct: 249 IGIESKWFVNCMSSSNTYSWKRMIETLEFFHQVGYSEKHMYDLFKVDPNLLLEGLGRKLY 308
Query: 319 VLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHA 378
+ GR +K G+ +N V S F ++ +LSSK V+NL+ + FL I M DI++++ +
Sbjct: 309 LFLGRFIKSGVDVNVVCSCFIEHSDMLSSKRVENLMSVISFLYNIRMEQDDIAHVLSNYM 368
Query: 379 ELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDV 438
++ S+KG + VC +L V + LC+II DDPL+L LA K + K P +
Sbjct: 369 HILSKHSIKGYRAVCMELGVPKADLCRIINDDPLELISLACKQKHKRSGGQSYCVPLSKL 428
Query: 439 EKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVL 498
EKT FLL+LGY+ENSEE+ +A+K F GRGDQLQER DCLV+AGLD + +VKR P +L
Sbjct: 429 EKTAFLLKLGYIENSEEMEEAVKLFPGRGDQLQERLDCLVEAGLDCSTAIRMVKRVPKIL 488
Query: 499 NQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLS 558
++V++KKID+LKN L YP+E +V +P Y D+ R++ R MY WL+ER LS
Sbjct: 489 VLKRNVIQKKIDFLKNTLGYPIECLVRYPTYFLQDVDRMSARVSMYEWLKERNAVSHALS 548
Query: 559 LSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSN 593
LSTI++ + +F + FV++HPEGP +W+ +K SN
Sbjct: 549 LSTIVSYDEKRFVQVFVNMHPEGPTIWQRIKTLSN 583
>gi|255579009|ref|XP_002530356.1| conserved hypothetical protein [Ricinus communis]
gi|223530103|gb|EEF32017.1| conserved hypothetical protein [Ricinus communis]
Length = 523
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/517 (47%), Positives = 347/517 (67%), Gaps = 8/517 (1%)
Query: 77 ASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSLM 136
+S+ S AR +AQ L +YLHSTRSL DAEH+SK SP F+ LL K+D +DV RS+
Sbjct: 7 SSQFSNAARKQAQAALLEYLHSTRSLQVTDAEHMSKGSPSFLEKLLQKVDIKEDVGRSVA 66
Query: 137 RFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMG 196
RFLRY+PINEFEPFFESLGL +E P LPR LMFLSDDE+LL+N H LC+YGIPR+K+G
Sbjct: 67 RFLRYHPINEFEPFFESLGLRPAEYRPFLPRDLMFLSDDELLLENLHTLCNYGIPRNKIG 126
Query: 197 KMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKL 256
++Y+EA E+F +D GVLA+KL AYE +GL ++ + K+V C P LLIG V+ F+K +E L
Sbjct: 127 RIYIEAGEVFGYDYGVLATKLRAYEEMGLDQSFMAKIVVCSPYLLIGDVNVDFIKSMEIL 186
Query: 257 KELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQK 316
++ G + WI ++L K SYNW ++ L+ K + E QL + +P +VFEGSG +
Sbjct: 187 RKGGIELCWIEKHLSEKCSYNWSKLHALLNLFSKACFREEQLCEIISQHPGIVFEGSGDR 246
Query: 317 VYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLM 376
L G L+K G N++ S+F Q PQI KF+ N+ Q FL EI M + +I ++
Sbjct: 247 TLSLIGFLVKFGSSKNQICSMFLQFPQIKVGKFLLNMRQCFLFLTEIEMEILEIGKIIRS 306
Query: 377 HAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP--LKLFHLASKTE-VKIDEQVDCQN 433
+ ++GSC+LK ++ S L VG++ LC II +P +K + + SK + DE++ +
Sbjct: 307 YPLMLGSCTLKKSNSLLSCLNVGKKRLCNIILQNPQEMKNWVIGSKVNPLPSDERLRSR- 365
Query: 434 PSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKR 493
+ K +FLL LG+VENS E+ KALK FRGRG +LQERFD +++AGLD V +V++
Sbjct: 366 ----MLKNKFLLDLGFVENSTEMEKALKVFRGRGAELQERFDSIMEAGLDKKDVHEMVRQ 421
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVA 553
AP +LNQ K+V++ KID+ N L +P+ S+V FPA+L Y + + + MY WL+++G
Sbjct: 422 APQILNQKKEVVKMKIDFFVNDLGFPISSLVTFPAFLNYTIPTVKLKLAMYNWLKDQGKV 481
Query: 554 KPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
P LSLST+++ SD F K +V++HP+G W+ LKK
Sbjct: 482 DPMLSLSTLISTSDKLFVKRYVELHPKGSEFWQDLKK 518
>gi|225441407|ref|XP_002275246.1| PREDICTED: uncharacterized protein LOC100241837 [Vitis vinifera]
gi|147864060|emb|CAN83222.1| hypothetical protein VITISV_031366 [Vitis vinifera]
gi|297739852|emb|CBI30034.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/513 (48%), Positives = 350/513 (68%), Gaps = 5/513 (0%)
Query: 80 VSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSLMRFL 139
+SR R +AQ L +YLH TRSL +MDAE++SKNSP F+ +L K+ + ++ +S+ RFL
Sbjct: 75 ISRTTRAQAQAALLEYLHCTRSLQFMDAENMSKNSPFFLEKILGKVKNEAEIGKSITRFL 134
Query: 140 RYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMY 199
RY+PINEFEPFFESLGL+ SE + LLPR+LMFL DD+VLL+N+++LC+YGI R+K+GK+Y
Sbjct: 135 RYHPINEFEPFFESLGLTPSEFTNLLPRNLMFLCDDQVLLENYYILCNYGIARNKIGKIY 194
Query: 200 VEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKEL 259
EA E+FR+D G+L KL AY LGLS++T+IK ++ P LLIG + FVK +EKLK +
Sbjct: 195 KEAPEVFRYDSGILRLKLQAYLELGLSQSTMIKAIASSPYLLIGDANMDFVKAMEKLKSV 254
Query: 260 GFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYV 319
G +++WI ++L Y+W Q+ L K+G+N QL L + +P ++ E SG +
Sbjct: 255 GIESNWIEKHLSEGNYYDWSQMVGLLCLFSKMGFNGEQLGELIRQHPGILLECSGNLAHS 314
Query: 320 LFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAE 379
L G LLK G NE+Y F Q P I KF +N FLIEI + +++I +V H
Sbjct: 315 LVGLLLKFGFTTNEIYIFFLQFPPIEFGKFYRNFRHCYLFLIEIELEVEEIGRIVRSHTV 374
Query: 380 LMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP--LKLFHLASKTEVKIDEQVDCQNPSKD 437
L+GSC+LK ++ + L +G++ LC IIKD+P LK + L S+ + D ++
Sbjct: 375 LLGSCALKRVNSLLANLNIGKKRLCGIIKDNPQELKKWVLGSRVGPLPNLGEDLRS---Q 431
Query: 438 VEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMV 497
++KT+FL LGYVEN++E+ KA K FRG+G +LQERFD L++AGLD V ++K AP +
Sbjct: 432 LQKTKFLSDLGYVENTKEIEKARKLFRGKGMELQERFDFLMKAGLDRKDVSEMIKVAPQI 491
Query: 498 LNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTL 557
LNQS DV+E KIDYL + L YP+ S+V FP+YL Y R+ R MY WL+++GVA+P L
Sbjct: 492 LNQSTDVIEMKIDYLIHALGYPISSLVTFPSYLSYTTERVELRMSMYNWLKDQGVAEPNL 551
Query: 558 SLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
+LSTI+ACSD F +V+ HP+G +WE LK+
Sbjct: 552 ALSTIIACSDNYFIDRYVNRHPKGAEIWEKLKQ 584
>gi|255579007|ref|XP_002530355.1| conserved hypothetical protein [Ricinus communis]
gi|223530102|gb|EEF32016.1| conserved hypothetical protein [Ricinus communis]
Length = 573
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/539 (45%), Positives = 351/539 (65%), Gaps = 11/539 (2%)
Query: 56 RLTHQPKVSLAESTQPPASLVASRVSRLARTE---AQEVLFDYLHSTRSLGYMDAEHISK 112
R +V + + P+ + +++RT AQ L +YLH TRS+ +MDAE++S
Sbjct: 36 RFYGSERVEICDDLANPSVDSNRSIGKISRTTVKGAQAALLEYLHVTRSIPFMDAENMSV 95
Query: 113 NSPDFVLNLLSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFL 172
NSP F+ LL KID+G D+ S+ RFLRY+PINEFEPFFESLGL EL PLLPR LMFL
Sbjct: 96 NSPHFLKKLLQKIDNGTDIGWSVTRFLRYHPINEFEPFFESLGLKPYELIPLLPRDLMFL 155
Query: 173 SDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIK 232
SDD++LL+N++VLC+YGIPR K+G++Y EA EIF ++ G LASKL AYE LGLS+ + K
Sbjct: 156 SDDDLLLENYYVLCNYGIPRYKIGRIYKEAMEIFGYNYGALASKLEAYEQLGLSQYFICK 215
Query: 233 LVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIG 292
+V+C P LLIG V+ FVKV++ L+E G + WI +L + SYNW Q+ L+ K G
Sbjct: 216 VVACSPYLLIGDVNVDFVKVVKILREGGIEFSWIEEHLM-ENSYNWRQILALLNLFRKAG 274
Query: 293 YNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKN 352
YNE QL L +P ++FEGSG K L G L KLG MN++ S+F Q P++ KFV N
Sbjct: 275 YNEAQLGALISHHPGILFEGSGDKTLSLIGFLFKLGCSMNQICSMFLQFPEMQVGKFVYN 334
Query: 353 LLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP- 411
L + L +I M + +I +V H L+GS +LK ++ + L +G++ L ++I+++P
Sbjct: 335 LKRCFLLLTDIEMDINEIGKIVCSHLLLLGSFTLKRTNSILANLNIGKKRLHKLIQENPQ 394
Query: 412 -LKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQL 470
+K + + S+ E++ KT+FL+ +G V N ++ +ALK FRGRG ++
Sbjct: 395 EMKRWEMGSRV-----ERLPSSWEESKTLKTKFLVDMGLVNNLNKMEQALKVFRGRGTEI 449
Query: 471 QERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYL 530
QERFDC+V+AGLD V ++K +P +LNQ K++LEKKID+L N L YP +V FP+YL
Sbjct: 450 QERFDCIVKAGLDRKDVLEMIKTSPQILNQKKEILEKKIDFLVNGLGYPASYLVNFPSYL 509
Query: 531 CYDMGRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLK 589
Y + R+ R MY WL+E+G L+LST++AC++ F + +V HP GP +W+ LK
Sbjct: 510 NYTIVRVKLRLSMYTWLKEQGTIDSKLALSTVIACAENLFVEQYVKHHPRGPVVWQDLK 568
>gi|224137882|ref|XP_002322675.1| predicted protein [Populus trichocarpa]
gi|222867305|gb|EEF04436.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/517 (47%), Positives = 339/517 (65%), Gaps = 7/517 (1%)
Query: 78 SRVSRLARTEAQE--VLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSL 135
S++S AR EAQ L +YLHSTRS ++DAEH+SK SP FV NLL K++ D+ RS+
Sbjct: 64 SKISDAARREAQASTALLEYLHSTRSFQFLDAEHMSKYSPVFVKNLLKKVNIDADIRRSI 123
Query: 136 MRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKM 195
R+LRY+PINEFE FFES+GL E S LLPR LM+LSDD++LL+N+HV+C+YGI R+KM
Sbjct: 124 TRYLRYHPINEFEIFFESMGLKPQEYSSLLPRDLMYLSDDDLLLENYHVMCNYGIARNKM 183
Query: 196 GKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEK 255
GK+Y EATE+FR+D GVLA KL AYE LGLS + + K+V P LLIG + F+K+LE
Sbjct: 184 GKIYKEATEVFRYDYGVLALKLKAYEKLGLSSSFIAKVVVRSPDLLIGDANIDFIKILEL 243
Query: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315
L++ G + I + L K +YNW Q+ L+ K GYN+ QL L P ++ E S
Sbjct: 244 LRKGGLEYRRIEKLLSDKSTYNWSQLLSLLNLFGKAGYNDEQLSELISQKPWILREDSVD 303
Query: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
+ +L G LLK G MN++ SLF Q P++ KF NL FL EI M +I +
Sbjct: 304 RALLLIGFLLKFGSTMNQICSLFLQFPKVQVEKFASNLRHCFLFLNEINMEAYEIGKLFR 363
Query: 376 MHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP--LKLFHLASKTEVKIDEQVDCQN 433
H +GS +LK ++ S+L G++ +C++I+++P +K + SK E D + ++
Sbjct: 364 SHPIFIGSFTLKKTNSLLSRLNAGKKRICEVIQENPEIMKKWVKGSKIEWLPDSGEELRS 423
Query: 434 PSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKR 493
+ KT+F L LG+VENS+E+ +ALK FRGRG +LQERFDCLV AGLD V ++K
Sbjct: 424 ---QMLKTKFFLDLGFVENSDEMKRALKVFRGRGAELQERFDCLVIAGLDRKDVCEMIKV 480
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVA 553
+P +LNQ ++V+E KID+L N L +P+ S+V FP+YL Y M R R MY WL+E+G
Sbjct: 481 SPQILNQKREVIEMKIDFLINDLGFPVSSLVRFPSYLSYTMQRAKLRLTMYNWLKEQGKV 540
Query: 554 KPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
P LS STI+ C+D F +VD HP GP +WE LKK
Sbjct: 541 NPMLSFSTIVGCTDNVFLSQYVDRHPRGPEIWEDLKK 577
>gi|297791279|ref|XP_002863524.1| hypothetical protein ARALYDRAFT_917019 [Arabidopsis lyrata subsp.
lyrata]
gi|297309359|gb|EFH39783.1| hypothetical protein ARALYDRAFT_917019 [Arabidopsis lyrata subsp.
lyrata]
Length = 462
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/444 (52%), Positives = 318/444 (71%), Gaps = 8/444 (1%)
Query: 153 SLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGV 212
SLGL SE+ L R L+ LSDD ++ +NFHVLC YGIPR K+G+M+ EA EIF ++ GV
Sbjct: 24 SLGLRPSEIPRFLQRDLVLLSDDGIMFENFHVLCYYGIPRGKIGRMFKEAREIFGYENGV 83
Query: 213 LASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPG 272
LASKL AYE+L LSK VIKLV+CCP LL+G +DS FV V+ KLK + DW+ RYL
Sbjct: 84 LASKLEAYESLVLSKPIVIKLVTCCPLLLVGDIDSEFVSVINKLKGVNIGCDWLARYLSD 143
Query: 273 KGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMN 332
+ +YNW ++ ET++ L K+G+ + +L +L K P LV E SG K Y++ + K+GL+MN
Sbjct: 144 RKTYNWLRILETMELLDKVGFKDERLSSLLKAYPDLVGEASGNKAYIMLEKFHKVGLQMN 203
Query: 333 EVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTV 392
E+ +L + NP++L K VK +L+ + FL I M + + +L H +L+ S SL GP+ V
Sbjct: 204 EIDNLVTDNPEMLLEKSVKRILETLKFLKRIRMEKQFVVRFLLCHMKLICSSSLLGPRAV 263
Query: 393 CSKLKVGRESLCQIIKDDPLKLFHLASKT---EVKIDEQVDCQNPSKDVEKTEFLLRLGY 449
++LK+GR+ LCQIIK++PL+LF LASKT +K+D +D +N EKT FLL+LGY
Sbjct: 264 WNRLKIGRDQLCQIIKEEPLRLFSLASKTNNSRIKLD-SLDLRN----AEKTVFLLKLGY 318
Query: 450 VENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKI 509
VENS+E+ +ALK+F+GRGD+LQERFDC V+AGLD NVV +VKRAP +LN+ K ++EKKI
Sbjct: 319 VENSDEMVRALKKFQGRGDELQERFDCFVKAGLDYNVVSQLVKRAPHMLNRPKGIIEKKI 378
Query: 510 DYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLSLSTILACSDAK 569
+ L +YL YP+ESV+ P YLCY M RI+HR MY+WL+ER A P L+L TI+ S+
Sbjct: 379 NLLTDYLGYPIESVIESPTYLCYSMERIHHRFSMYIWLKERDAAMPRLTLGTIVGISNTL 438
Query: 570 FEKYFVDVHPEGPAMWESLKKSSN 593
F YFV+ HPEG A WE++KK+S
Sbjct: 439 FVSYFVNTHPEGRATWENIKKAST 462
>gi|224137886|ref|XP_002322676.1| predicted protein [Populus trichocarpa]
gi|222867306|gb|EEF04437.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/566 (44%), Positives = 357/566 (63%), Gaps = 25/566 (4%)
Query: 29 VSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVSLAESTQPPASLVASRVSRLARTEA 88
VS+ KT + + F I R + + R+ AE+ Q +S L+RTEA
Sbjct: 18 VSSNKTPLSSMVSLFNIAENPRFYITKRIVQ------AENGQS--------ISPLSRTEA 63
Query: 89 QEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSLMRFLRYNPINEFE 148
Q L +YLH TR++ + DAE++SKNSP F+ LL+K+D + +S+ R+L ++PINEFE
Sbjct: 64 QAALLEYLHFTRNIQFTDAENMSKNSPHFLEKLLAKVDIDASIGQSITRYLCFHPINEFE 123
Query: 149 PFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRH 208
PFFESLGL + +PLLPR LMFL DD++LL+N+HVLC+YGI RSK+GK+Y EA E+F +
Sbjct: 124 PFFESLGLKPHDYNPLLPRDLMFLCDDDLLLENYHVLCNYGIARSKIGKIYKEAAEVFGY 183
Query: 209 DRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGR 268
D GVL KL AYE LGL ++ ++KLV C P LLIG V++ FVKVL L++ G I
Sbjct: 184 DYGVLVLKLKAYEELGLGQSFMMKLVVCSPYLLIGEVNADFVKVLGILRKEGVDISRIEE 243
Query: 269 YLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLG 328
+L K SY+W ++ L+ GYNE QL L + + FE S ++Y+L G LLK G
Sbjct: 244 HLSEKSSYDWSKLLALLNLFRHAGYNEEQLGGLISRHLGIFFEDSVDRIYLLIGFLLKFG 303
Query: 329 LKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKG 388
MN++ S+F Q PQ+ +F NL FL EI M +I N+ H ++GSC LK
Sbjct: 304 STMNQICSMFLQFPQMEFEEFFSNLRHCFLFLKEIQMEAHEIRNIFHSHPLMLGSCRLKK 363
Query: 389 PKTVCSKLKVGRESLCQIIKDDP--LKLFHLASKTEVKIDEQVDCQN--PSKDVEKTEFL 444
P T+ L + +C++I++ P LK + + SK E QN ++KT+FL
Sbjct: 364 PNTLRLALHAADKRMCEVIQESPQVLKKWVMGSKVE-------RLQNLILKSRMQKTKFL 416
Query: 445 LRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDV 504
L LG V++S E+ KALK FRG G ++QERFDC+V+AGL V ++K +P +LNQ+KDV
Sbjct: 417 LDLGIVDDSNEIGKALKVFRGSGAKIQERFDCIVEAGLSRKDVCEMIKASPQILNQTKDV 476
Query: 505 LEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLSLSTILA 564
LE KID+L N + YP+ +V FP+YL Y M R+ R MY WL+++G + P LSLST+++
Sbjct: 477 LEMKIDFLVNKVGYPVSYLVTFPSYLNYTMERVELRLAMYNWLKDQGKSVPMLSLSTVIS 536
Query: 565 CSDAKFEKYFVDVHPEGPAMWESLKK 590
SD KF +V+ HP GP +W++LKK
Sbjct: 537 LSDKKFINEYVNSHPRGPEIWQNLKK 562
>gi|449457339|ref|XP_004146406.1| PREDICTED: uncharacterized protein LOC101221161 [Cucumis sativus]
Length = 594
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/515 (45%), Positives = 338/515 (65%), Gaps = 3/515 (0%)
Query: 77 ASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSLM 136
R+SR EAQ + +YLHSTR + + DA+ +SKNSP F+ LL +++ D+ RS++
Sbjct: 70 GRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSII 129
Query: 137 RFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMG 196
RFLRY+PINEFEPFFES+GL +E + LPR+LMFLSDD++LL+NFHVL +YG+ R+K G
Sbjct: 130 RFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTG 189
Query: 197 KMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKL 256
K+Y E T+IFR++ GVL SKL AYE LGLS+ V +V C P LLIGGV+ RFVKVLEKL
Sbjct: 190 KIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKL 249
Query: 257 KELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQK 316
+ +GF+ W+ L SYNW Q+ L + ++G + +L +L P L+ E SG K
Sbjct: 250 ENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSK 309
Query: 317 VYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLM 376
L G LLK+G M ++ S+F Q PQI +FV N+ Q EI M +++I +
Sbjct: 310 SLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRS 369
Query: 377 HAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHL-ASKTEVKIDEQVDCQNPS 435
L+G +LK K++ L VG++ LCQ + ++P +L +L K +++ + +
Sbjct: 370 RPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGEVMRSK 429
Query: 436 KDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAP 495
+ +KT+FLL+LG ENS E+ +ALK FRG+ LQERFDC+V+AG+D V ++K P
Sbjct: 430 Q--QKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCP 487
Query: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP 555
++N KD +E+KID+L N L YP+ S+++FP YL + + R MY WL+E+G A P
Sbjct: 488 RIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADP 547
Query: 556 TLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
L+L TI++CS+ +F ++ V+ HP G +WE+LK+
Sbjct: 548 MLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKR 582
>gi|449531338|ref|XP_004172643.1| PREDICTED: uncharacterized LOC101221161 [Cucumis sativus]
Length = 594
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/515 (45%), Positives = 338/515 (65%), Gaps = 3/515 (0%)
Query: 77 ASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSLM 136
R+SR EAQ + +YLHSTR + + DA+ +SKNSP F+ LL +++ D+ RS++
Sbjct: 70 GRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSII 129
Query: 137 RFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMG 196
RFLRY+PINEFEPFFES+GL +E + LPR+LMFLSDD++LL+NFHVL +YG+ R+K G
Sbjct: 130 RFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTG 189
Query: 197 KMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKL 256
K+Y E T+IFR++ GVL SKL AYE LGLS+ V +V C P LLIGGV+ RFVKVLEKL
Sbjct: 190 KIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKL 249
Query: 257 KELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQK 316
+ +GF+ W+ L SYNW Q+ L + ++G + +L +L P L+ E SG K
Sbjct: 250 ENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSK 309
Query: 317 VYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLM 376
L G LLK+G M ++ S+F Q PQI +FV N+ Q EI M +++I +
Sbjct: 310 SLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRS 369
Query: 377 HAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHL-ASKTEVKIDEQVDCQNPS 435
L+G +LK K++ L VG++ LCQ + ++P +L +L K +++ + +
Sbjct: 370 RPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGEVMRSK 429
Query: 436 KDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAP 495
+ +KT+FLL+LG ENS E+ +ALK FRG+ LQERFDC+V+AG+D V ++K P
Sbjct: 430 Q--QKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDEKDVYKMIKVCP 487
Query: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP 555
++N KD +E+KID+L N L YP+ S+++FP YL + + R MY WL+E+G A P
Sbjct: 488 RIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADP 547
Query: 556 TLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
L+L TI++CS+ +F ++ V+ HP G +WE+LK+
Sbjct: 548 MLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKR 582
>gi|224137890|ref|XP_002322677.1| predicted protein [Populus trichocarpa]
gi|222867307|gb|EEF04438.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/513 (45%), Positives = 337/513 (65%), Gaps = 7/513 (1%)
Query: 80 VSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSLMRFL 139
++ ++R AQ L +YL+ TR++ + DA+++SKNSP F+ LL+K+D D+ S+ RFL
Sbjct: 55 INPVSRIAAQTALLEYLYVTRNIQFTDADNMSKNSPHFLEKLLAKVDIDADIGHSITRFL 114
Query: 140 RYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMY 199
++PINEFEPFFESLGL + +PLLPR LMFL DD++LL+N+HVLC+YGI RSK+GK+Y
Sbjct: 115 CFHPINEFEPFFESLGLKPHDYNPLLPRDLMFLCDDDLLLENYHVLCNYGIARSKIGKIY 174
Query: 200 VEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKEL 259
EATE+F +D GVL KL AYE LGL ++ ++KLV C P LLIG V++ F+KVLE L++
Sbjct: 175 KEATEVFGYDYGVLVLKLKAYEELGLVQSFMMKLVVCSPYLLIGEVNADFIKVLEILRKE 234
Query: 260 GFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYV 319
G I +L K SY+W ++ L+ GYNE QL L + A+ FE S ++Y+
Sbjct: 235 GVDISRIEEHLSEKSSYDWSKLLALLNLFRHAGYNEEQLGGLISQHLAIFFEDSVDRIYL 294
Query: 320 LFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAE 379
L G LLK G MN++ S+F PQ+ +F NL FL EI M +I ++ H
Sbjct: 295 LIGFLLKFGSTMNQICSMFLWFPQMEFEEFFSNLRHCFLFLNEIQMEAHEIQSIFRSHPL 354
Query: 380 LMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP--LKLFHLASKTEVKIDEQVDCQNPSKD 437
++GSC LK P T+ L + +C++I++ P LK + + S K+ + + S+
Sbjct: 355 MLGSCRLKKPNTLRLALHAAEKRMCEVIQESPQVLKKWVMGS----KVKRLPNLRLKSRK 410
Query: 438 VEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMV 497
+ KT+FLL LG V+NS ++ KALK FRG G++ QERFDC+V+AG+ V ++K +P +
Sbjct: 411 L-KTKFLLDLGIVDNSNKIGKALKVFRGSGEKFQERFDCIVEAGVSRKDVCEMIKASPQI 469
Query: 498 LNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTL 557
L QSKDVLE KID+L N + YP+ +V FP+YL + R+ R MY WL+++G + P L
Sbjct: 470 LGQSKDVLEMKIDFLVNKVGYPVSYLVTFPSYLNFTTQRVELRLAMYNWLKDQGKSVPML 529
Query: 558 SLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
SL ++++ SD KF +V+ HP GP +W++LKK
Sbjct: 530 SLRSLISLSDKKFINEYVNSHPRGPEIWQNLKK 562
>gi|22327586|ref|NP_680395.1| mitochondrial transcription termination factor-like protein
[Arabidopsis thaliana]
gi|332007823|gb|AED95206.1| mitochondrial transcription termination factor-like protein
[Arabidopsis thaliana]
Length = 414
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/416 (51%), Positives = 292/416 (70%), Gaps = 2/416 (0%)
Query: 178 LLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCC 237
+ +NFHVLC YGIPR K+G++Y EA EIF ++ GVLASKL YE L L K VIKLV+CC
Sbjct: 1 MFENFHVLCYYGIPRDKIGRLYKEAREIFVYENGVLASKLEPYEILVLRKAIVIKLVTCC 60
Query: 238 PSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQ 297
P LL+GG+D FV V+ KLK L DW+ RYL + +YNW ++ ET++ L K+G+ E +
Sbjct: 61 PLLLVGGIDCEFVSVVNKLKGLNLGCDWLARYLSVRKTYNWRRILETMELLEKVGFKEKK 120
Query: 298 LLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAV 357
L NL K P LV E SG K Y++F + K+GL+MNE+ L N ++L K VK +L+A+
Sbjct: 121 LSNLLKAYPDLVGETSGNKAYIMFEKFHKVGLQMNEIDKLLIDNSEMLLEKSVKRILEAL 180
Query: 358 GFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHL 417
FL I + + + + H + + S SL P+ V ++LK+ R+ LCQIIK++PL+LF +
Sbjct: 181 KFLKCIRIEKQFVVRFLQCHMKHICSSSLLVPRAVWNRLKIRRDELCQIIKEEPLRLFSI 240
Query: 418 ASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCL 477
ASKT K ++D + S++ EKT FLL+LGYVENS+E+ +ALK+F+GRGD+LQERFDC
Sbjct: 241 ASKTN-KGRIELDSLD-SRNAEKTTFLLKLGYVENSDEMVRALKKFQGRGDELQERFDCF 298
Query: 478 VQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRI 537
V+AGLD NVV +VKRAP +LN+ KD++EKKI L +YL YP+ESV+ P YLCY M RI
Sbjct: 299 VKAGLDYNVVSQLVKRAPHILNRPKDIIEKKIIMLIDYLVYPIESVIESPTYLCYSMKRI 358
Query: 538 NHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSN 593
+ R MY+WLRER P L+L T++ S+ YFV+ HPEGPA WE++KK+S
Sbjct: 359 HQRFTMYIWLRERDAVIPRLTLGTVVGISNTLIVPYFVNTHPEGPATWENIKKAST 414
>gi|242082167|ref|XP_002445852.1| hypothetical protein SORBIDRAFT_07g026910 [Sorghum bicolor]
gi|241942202|gb|EES15347.1| hypothetical protein SORBIDRAFT_07g026910 [Sorghum bicolor]
Length = 641
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/526 (42%), Positives = 323/526 (61%), Gaps = 25/526 (4%)
Query: 88 AQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKI-DSGKD---------------- 130
AQ +YLH TR L ++DAEHISK+SP FV LL+++ D+ KD
Sbjct: 104 AQRTFMEYLHVTRGLSFLDAEHISKHSPAFVSKLLNQVKDAIKDPVEGGEAVFRSKVKTR 163
Query: 131 ------VTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHV 184
T +L R RY+PINEFEPFFES+GL SE LP+ LMFLSDDE LL+N+ V
Sbjct: 164 EMRDERATTALQRLFRYHPINEFEPFFESMGLKPSEYESFLPQDLMFLSDDEALLENYRV 223
Query: 185 LCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGG 244
LC+YG+ R+K+G +Y +A E+F GVLASKL A E+LG SK TVIKLV+CCP++L G
Sbjct: 224 LCNYGVMRTKIGGIYRDAGEVFSFGDGVLASKLRAIEDLGFSKTTVIKLVTCCPAVLTRG 283
Query: 245 VDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKT 304
+ +K+++ L + G + DWIG++L K SYNW ++ E F ++G+++ + L +
Sbjct: 284 PHAE-LKIIKWLDDTGIQRDWIGQFLSIKKSYNWRKMVEVPQFFTELGFDKEGIGKLIRQ 342
Query: 305 NPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIG 364
+P + +GSG+ ++ +LK G +++ LF P + + F +N+ + FL EI
Sbjct: 343 HPDFLLDGSGKALFRAVAIMLKAGSGKEDLFDLFLDFPDVQARSFARNIQSLILFLTEID 402
Query: 365 MGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVK 424
+ +DI V+ +A ++GS +K ++ + L VG+ L +II ++P +L A +V
Sbjct: 403 VSEEDIKKFVVANASMLGSARVKKANSILTYLNVGKRRLWRIIMEEPHELMKYALGLKVN 462
Query: 425 IDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDS 484
D S EK +FL +G+ E S+++ KALK FRG+GDQLQ+RFD LV+ G +
Sbjct: 463 RLPPYDRTEKSLK-EKVKFLKNIGFEEGSDDMNKALKTFRGKGDQLQDRFDFLVKTGFEP 521
Query: 485 NVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMY 544
V ++K AP VLNQ VLE KI +L N YPL ++V +PAYL + + R R MY
Sbjct: 522 KDVSKMIKVAPQVLNQKIHVLESKIAFLLNETSYPLSALVGYPAYLSFTIERTKARFLMY 581
Query: 545 VWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
WLRE+G+ P L+LST+LACS+ +F KY V H +GP +WE LKK
Sbjct: 582 NWLREKGLVPPNLALSTLLACSEKRFLKYLVLKHEKGPEVWEKLKK 627
>gi|226494423|ref|NP_001152516.1| mTERF family protein [Zea mays]
gi|195657075|gb|ACG48005.1| mTERF family protein [Zea mays]
Length = 649
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/547 (40%), Positives = 334/547 (61%), Gaps = 32/547 (5%)
Query: 73 ASLVASRVSRLARTE----AQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKI-DS 127
A +V V+R+ + AQ+ +YLH TR L + DAEHISK+SP FV NLL ++ D+
Sbjct: 85 AVMVDKEVNRMKKMRVFWTAQQTFMEYLHVTRGLSFPDAEHISKHSPVFVSNLLHQVKDA 144
Query: 128 GKD----------------------VTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLL 165
KD T++L R RY PINEFEPFFES+GL SE P L
Sbjct: 145 IKDPVEGDEAAFRSKVKTKEIRDERATKALERLFRYYPINEFEPFFESMGLKPSEYQPFL 204
Query: 166 PRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGL 225
R LMFLSDDE +L+N+ VLC+YG+ R+K+G++Y+ A E F GVLASKL A E+LG
Sbjct: 205 RRDLMFLSDDETVLENYRVLCNYGVMRNKIGQIYIGAAEAFSFGDGVLASKLRALEDLGF 264
Query: 226 SKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETL 285
SK+TVIKL++CCP++L G + +K++E L ++G + DWIG++L K SYNW ++ E
Sbjct: 265 SKSTVIKLMACCPAVLTCGPHAE-LKIIEWLDDIGIQRDWIGQFLSVKKSYNWRKMVEVP 323
Query: 286 DFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQIL 345
FL ++G++ + L + +P + +GSG ++ +LK G ++++LF P +
Sbjct: 324 QFLAELGFDNEGIGKLIRQHPDFLLDGSGNALFRAVVIMLKAGSGKGDLFNLFLDFPDVQ 383
Query: 346 SSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQ 405
+ F +N+ FL +I + +DI V+ +A ++GS +K ++ + L VG++ L +
Sbjct: 384 ARSFARNIQSVTLFLTDIDVSEEDIKKFVVANASMLGSARVKKANSILTYLSVGKKRLWK 443
Query: 406 IIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDV--EKTEFLLRLGYVENSEEVTKALKQF 463
II+++P +L + +K+ C ++ EK +FL +G+ E S ++ KALK F
Sbjct: 444 IIREEPRQL--MKYTLGLKVSRLPPCDEIAEKSLKEKVKFLKNVGFAEGSNDMNKALKAF 501
Query: 464 RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESV 523
RG+GD+LQ+RFD LV AG + V +++K AP VLNQ VL+ KI +L N YPL +
Sbjct: 502 RGKGDELQDRFDFLVNAGFEPKDVSHMIKVAPQVLNQKTHVLQSKISFLVNETAYPLSVL 561
Query: 524 VAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPA 583
V +PA+L + + R R MY WLRERG+ P +LST+LACS+ +F KY V H +GP
Sbjct: 562 VGYPAFLSFTIERTKARFLMYDWLRERGLVPPNFALSTLLACSEKRFFKYLVLKHQKGPE 621
Query: 584 MWESLKK 590
+WE LKK
Sbjct: 622 VWEKLKK 628
>gi|414869545|tpg|DAA48102.1| TPA: mTERF family protein [Zea mays]
Length = 649
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/528 (41%), Positives = 326/528 (61%), Gaps = 28/528 (5%)
Query: 88 AQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKI-DSGKD---------------- 130
AQ+ +YLH TR L + DAEHISK+SP FV NLL ++ D+ KD
Sbjct: 104 AQQTFMEYLHVTRGLSFPDAEHISKHSPVFVSNLLHQVKDAIKDPVEGDEAAFRSKVKTK 163
Query: 131 ------VTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHV 184
T++L R RY PINEFEPFFES+GL SE P L R LMFLSDDE +L+N+ V
Sbjct: 164 EIRDERATKALERLFRYYPINEFEPFFESMGLKPSEYQPFLRRDLMFLSDDETVLENYRV 223
Query: 185 LCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGG 244
LC+YG+ R+K+G++Y+ A E F GVLASKL A E+LG SK+TVIKL++CCP++L G
Sbjct: 224 LCNYGVMRNKIGQIYIGAAEAFSFGDGVLASKLRALEDLGFSKSTVIKLMACCPAVLTCG 283
Query: 245 VDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKT 304
+ +K++E L ++G + DWIG++L K SYNW ++ E FL ++G++ + L +
Sbjct: 284 PHAE-LKIIEWLDDIGIQRDWIGQFLSVKKSYNWRKMVEVPQFLAELGFDNEGIGKLIRQ 342
Query: 305 NPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIG 364
+P + +GSG ++ +LK G ++++LF P + + F +N+ FL +I
Sbjct: 343 HPDFLLDGSGNALFRAVVIMLKAGSGKGDLFNLFLDFPDVQARSFARNIQSVTLFLTDID 402
Query: 365 MGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVK 424
+ +DI V+ +A ++GS +K ++ + L VG++ L +II+++P +L + +K
Sbjct: 403 VSEEDIKKFVVANASMLGSARVKKANSILTYLSVGKKRLWKIIREEPRQL--MKYTLGLK 460
Query: 425 IDEQVDCQNPSKDV--EKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGL 482
+ C ++ EK +FL +G+ E S ++ KALK FRG+GD+LQ+RFD LV AG
Sbjct: 461 VSRLPPCDEIAEKSLKEKVKFLKNVGFAEGSNDMNKALKAFRGKGDELQDRFDFLVNAGF 520
Query: 483 DSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCK 542
+ V +++K AP VLNQ VL+ KI +L N YPL +V +PA+L + + R R
Sbjct: 521 EPKDVSHMIKVAPQVLNQKTHVLQSKISFLVNETAYPLSVLVGYPAFLSFTIERTKARFL 580
Query: 543 MYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
MY WLRERG+ P +LST+LACS+ +F KY V H +GP +WE LKK
Sbjct: 581 MYDWLRERGLVPPNFALSTLLACSEKRFFKYLVLKHQKGPEVWEKLKK 628
>gi|255579011|ref|XP_002530357.1| conserved hypothetical protein [Ricinus communis]
gi|223530104|gb|EEF32018.1| conserved hypothetical protein [Ricinus communis]
Length = 578
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/517 (43%), Positives = 331/517 (64%), Gaps = 7/517 (1%)
Query: 76 VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSL 135
+ S+ S+ AR +AQ L +YL TRSL + AEH+SKNSP F+ LL ++ +DV S+
Sbjct: 65 IRSQFSKAARKQAQAALLEYLRFTRSLQFTLAEHMSKNSPSFLEKLLQRVYVDEDVGWSV 124
Query: 136 MRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKM 195
RFLRY+PINEFEPFFESLGL + LP L+FLSDDE+LL+NFH LC+YGIP +K+
Sbjct: 125 PRFLRYHPINEFEPFFESLGLRPYQFVAFLPHDLIFLSDDELLLENFHTLCNYGIPMNKI 184
Query: 196 GKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEK 255
G+++ EA EIF ++ G+L KL YE LGL ++ + K+V C P LL G VD FVK +E
Sbjct: 185 GRIFKEAGEIFGYNYGILEMKLRTYEELGLDQSLMGKIVVCSPYLLTGDVDIDFVKSMEI 244
Query: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315
+++ G + WI ++L K SYNW Q+ L+ K GYNE QL + +P ++FEGSG
Sbjct: 245 VRKGGIEFRWIEKHLSEKCSYNWSQLHALLNLFSKTGYNEEQLCAIISQHPGIIFEGSGN 304
Query: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
L G L+K G +N++ S+FSQ PQ+ +F+ N+ Q FL EI + + +I ++
Sbjct: 305 MTLSLIGFLVKFGSSINQICSMFSQFPQMRVGRFLLNMKQCFLFLTEIKLEILEIGKIIR 364
Query: 376 MHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKL--FHLASKTEVKIDEQVDCQN 433
H ++GSC+LK ++ S L G++ +C II +PL++ + + SK E++ +
Sbjct: 365 SHPLMLGSCTLKKSSSLISILNAGKKRICNIILQNPLEMKNWVIGSKINPLPSERLRSR- 423
Query: 434 PSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKR 493
+ K +FLL LG+V+NS E+ KALK F+G G +L ERFDC++QAGLD I+++
Sbjct: 424 ----ILKIKFLLDLGFVKNSIEMEKALKVFKGSGAELHERFDCIMQAGLDKKDACEIIRQ 479
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVA 553
AP +LNQ K+V++ KID+L N L YP+ S++ FP L Y + + + M WL+++G+
Sbjct: 480 APPILNQKKEVIKMKIDFLVNDLGYPISSLLTFPTILTYAIPTVKLKWVMSNWLKDQGIV 539
Query: 554 KPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
P SL ++ SD F K +V +HP+G W++LK+
Sbjct: 540 VPMCSLRSLFKNSDKAFIKRYVKLHPKGFEFWQNLKE 576
>gi|357509907|ref|XP_003625242.1| hypothetical protein MTR_7g093000 [Medicago truncatula]
gi|355500257|gb|AES81460.1| hypothetical protein MTR_7g093000 [Medicago truncatula]
Length = 571
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/526 (43%), Positives = 328/526 (62%), Gaps = 12/526 (2%)
Query: 80 VSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKI---DSGKDVTRSLM 136
+S+L EAQ L +YLHSTRSL ++DA+++ KNSP F+ NL+ K ++ + R +
Sbjct: 44 LSKLTIKEAQAALLEYLHSTRSLQFLDADNMCKNSPFFLQNLVHKTLKNENSINTKRLIS 103
Query: 137 RFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMG 196
R LRYNPINEFEPFFESLGL SE LLPR L+FL+DD +L+ N+H LC+YG+PRSKMG
Sbjct: 104 RHLRYNPINEFEPFFESLGLKPSEYESLLPRDLIFLNDDPLLMANYHTLCNYGVPRSKMG 163
Query: 197 KMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKL 256
K++ +A ++F+ + GVL SK+ AYE+LG+S + ++ V+ P +L+G V+ FVKV+E L
Sbjct: 164 KIFKQAPQVFKFENGVLVSKIKAYEDLGISASILVNAVAVSPGILVGDVNVEFVKVVEML 223
Query: 257 KEL-------GFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALV 309
K + F + WI + + S NW + E L L G++E QL + +P +V
Sbjct: 224 KNIVAKGGDGDFDSGWIQWHYLDEVSCNWGLMLELLCLLSDTGFSEKQLAEIIHRSPCIV 283
Query: 310 FEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKD 369
FE SG K + G L+K GL +N++ LF + PQIL KF NL + L EI M K+
Sbjct: 284 FEESGGKTLSMIGFLVKFGLSVNQIALLFLEFPQILMVKFFANLRVCLQLLTEIEMEAKE 343
Query: 370 ISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVK-IDEQ 428
I + H L GS +LK K++ L VG+ LC I++D+P ++ + VK +
Sbjct: 344 IGKIFQSHTILAGSNTLKTTKSLLGCLNVGKRRLCSILQDNPHEMKNWVLGIRVKPMVGL 403
Query: 429 VDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVR 488
D + V KTEFLLRLGYVEN++E+ A K FRG+G +LQERFD +V AGL + VR
Sbjct: 404 RDLEEEKSRVGKTEFLLRLGYVENTKEMDSAFKAFRGKGAELQERFDFIVNAGLTRDEVR 463
Query: 489 NIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLR 548
+++ +P +LNQ+ D ++ KI+YL + + +V FP+YL Y R+ R MY WL
Sbjct: 464 RMIRVSPQILNQNTDRVKMKIEYLVKK-GFSVSDLVNFPSYLSYKSPRVKLRLSMYNWLV 522
Query: 549 ERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSNS 594
+ G P L+LSTI+AC+D F + +V HP G +WE L+K +S
Sbjct: 523 DHGAVTPGLALSTIIACTDNLFLQSYVKRHPSGLQVWEELQKEIHS 568
>gi|357141946|ref|XP_003572404.1| PREDICTED: uncharacterized protein LOC100822558 [Brachypodium
distachyon]
Length = 648
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/533 (42%), Positives = 324/533 (60%), Gaps = 35/533 (6%)
Query: 88 AQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKI-DSGKD---------------- 130
AQ L +YLH TR + + DAEHISK SP F LL K+ D+ ++
Sbjct: 114 AQRTLMEYLHVTRGMCFSDAEHISKRSPVFASKLLEKVKDAAREPAEGGDEVVFKSVVKK 173
Query: 131 -------VTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFH 183
V+++L+R YNPINEFEPF ES+GLSQSE S LPR LMFLSDDE+L +N+
Sbjct: 174 RDMKDERVSKALVRLFNYNPINEFEPFLESIGLSQSECSSFLPRDLMFLSDDELLFENYR 233
Query: 184 VLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIG 243
VLC+YGI R K+GK+Y +ATE+F GVL SKL E LG SK +VIKLV+ P +L+
Sbjct: 234 VLCNYGIARCKIGKIYRDATEVFGFGHGVLVSKLNDIEELGFSKTSVIKLVTATPVVLVR 293
Query: 244 GVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFK 303
+ +K+L+ L +G + DWI ++L + SYNW ++++ F +G+ + + L +
Sbjct: 294 DPNVE-LKILQWLDGIGIQWDWISQFLSARKSYNWTKMNQVPQFFSDLGFTKEGIAKLVR 352
Query: 304 TNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEI 363
+P + +GSG+ ++ L +LK G E++ LF P + F KNL + + FL E+
Sbjct: 353 QHPDFLLDGSGKVLFTLVLIMLKAGSGKKELFDLFLNFPDVPVENFTKNLRKGMLFLAEV 412
Query: 364 GMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP--LKLFHLASKT 421
G+ +DI +VL +++GS +K P ++ + L G++ L +II ++P L + L SK
Sbjct: 413 GLSNEDIKKIVLSDGQMLGSAPIKKPNSILTHLNTGKKRLRKIILENPKLLGSYRLGSKV 472
Query: 422 EVKIDEQVDCQNPSKDV--EKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQ 479
Q+ +P + K +FL +G+VE SEE+ KALK FRG+GD+LQ+R+D LV
Sbjct: 473 -----SQLPRIDPFEQSFKGKIKFLKSIGFVEGSEEMKKALKVFRGKGDELQDRYDFLVN 527
Query: 480 AGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINH 539
AG D V N++K AP +LNQ DV+E KI +L N YPL +V FPAYL + + R
Sbjct: 528 AGFDPKDVVNMIKMAPQILNQKIDVVESKISFLLNDTGYPLSELVCFPAYLSFTVERTKV 587
Query: 540 RCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSS 592
R MY WL ERG A P L+LST+LACSD F +Y+V HP GP +WE+ K+ S
Sbjct: 588 RLFMYNWLLERG-AVPQLALSTVLACSDKCFMRYYVKKHPMGPEVWENYKRES 639
>gi|110739994|dbj|BAF01901.1| hypothetical protein [Arabidopsis thaliana]
Length = 346
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/347 (57%), Positives = 260/347 (74%), Gaps = 1/347 (0%)
Query: 247 SRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNP 306
+ F V++KLK L DW+GRYL + +Y+W ++ ET++FL K+G E +L +L KT P
Sbjct: 1 AEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIEFLDKVGCKEEKLSSLLKTYP 60
Query: 307 ALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMG 366
ALV EGSG+K YVLFGRL K GL++NE+Y LF NP++LS K VKN+ + + FLI I M
Sbjct: 61 ALVIEGSGKKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLSDKCVKNIQKTLDFLIAIRME 120
Query: 367 MKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKID 426
+ I+ ++L H EL+GSCSL P+T C L V ++ LC+I+K +PL+LF S T+ +
Sbjct: 121 TQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKILKKEPLRLFCFVSTTKKRKS 180
Query: 427 EQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNV 486
+ + ++ K +EKTEFLLRLGYVENS+E+ KALKQFRGRGDQLQERFDCLV+AGL+ NV
Sbjct: 181 KPLS-EDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGRGDQLQERFDCLVKAGLNYNV 239
Query: 487 VRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVW 546
V I++ APM+LN SKDV+EKKI L L YP+ES+V FPAYLCYDM RI+HR MY+W
Sbjct: 240 VTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRFPAYLCYDMQRIHHRFSMYLW 299
Query: 547 LRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSN 593
LRER AKP LS STIL C DA+F KYFV+VHPEGPA+WES+ +SS
Sbjct: 300 LRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWESINQSST 346
>gi|115477308|ref|NP_001062250.1| Os08g0518200 [Oryza sativa Japonica Group]
gi|28411850|dbj|BAC57325.1| unknown protein [Oryza sativa Japonica Group]
gi|113624219|dbj|BAF24164.1| Os08g0518200 [Oryza sativa Japonica Group]
gi|215686698|dbj|BAG88951.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215716996|dbj|BAG95359.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201463|gb|EEC83890.1| hypothetical protein OsI_29897 [Oryza sativa Indica Group]
gi|222640869|gb|EEE69001.1| hypothetical protein OsJ_27943 [Oryza sativa Japonica Group]
Length = 636
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/532 (40%), Positives = 319/532 (59%), Gaps = 26/532 (4%)
Query: 88 AQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKI-DSGKD---------------- 130
AQ+ +YLH TR + + DAEH+SK SP F+ LL K+ D+ K+
Sbjct: 97 AQKAFMEYLHVTRGICFSDAEHMSKRSPIFISKLLEKVKDAAKEPTEEGEEVPFRSKVKK 156
Query: 131 -------VTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFH 183
V+++L+R ++PINEFEPFFES+G++ E PLLPR LMFL+DDE +LDNF
Sbjct: 157 REMRDERVSKALVRLFNFHPINEFEPFFESIGIAPGEYEPLLPRDLMFLNDDETMLDNFR 216
Query: 184 VLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIG 243
VLC+YGI R+K+G++Y +ATE+F GVLASKL A E+ GLSK +VIKLV P +L+
Sbjct: 217 VLCNYGIARTKIGRIYRDATEVFSFGHGVLASKLKALEDQGLSKTSVIKLVMSSPVILVR 276
Query: 244 GVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFK 303
+ +K+L L ++G + DW+GR+L K SYNW ++ + F +G+ + L +
Sbjct: 277 DPNVE-LKILRWLDDVGIQRDWLGRFLSVKKSYNWGKMVQVPQFFSDLGFTNEGIGKLVR 335
Query: 304 TNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEI 363
NP +F GSG+ ++ +LK G E+ LF P + F +NL + + FL EI
Sbjct: 336 QNPDFLFSGSGKMLFSAVLVMLKAGFGKKELVDLFLNFPNLSVDNFTRNLRRGIFFLAEI 395
Query: 364 GMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEV 423
G+ +DI V+ + ++GS LK P ++ + L VG++ LC+++ +DP L + +V
Sbjct: 396 GVSEEDIKKFVVSNGSILGSVQLKKPNSIMTHLSVGKKRLCRMVMEDPQLLMKFSLGAKV 455
Query: 424 KIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLD 483
+VD S EK +FL LG++E SE +T+ LK FRG+GD+L++R+D LV+ GLD
Sbjct: 456 SRIPKVDLHEASFK-EKVKFLQNLGFMEGSERMTRGLKAFRGKGDELKDRYDFLVKTGLD 514
Query: 484 SNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKM 543
V ++ AP VLNQ VLE KI +L N + YPL ++V FP++L + + R R M
Sbjct: 515 PEHVVQMITMAPHVLNQKIHVLESKISFLVNDMGYPLSTLVIFPSFLSFTVERTKLRFLM 574
Query: 544 YVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSNSS 595
Y WL E+GV L+LST+LA +D F K +V HP G +WE K S+
Sbjct: 575 YNWLLEKGVIATGLALSTLLATADKHFVKRYVVRHPMGLEVWEKFKTEVAST 626
>gi|356570512|ref|XP_003553429.1| PREDICTED: uncharacterized protein LOC100807690 [Glycine max]
Length = 562
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/544 (40%), Positives = 342/544 (62%), Gaps = 20/544 (3%)
Query: 65 LAESTQPPASLVASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSK 124
L+ +PP S + + A EAQ L +YLHSTRSL +DAE++ +NSP F+ +LL+K
Sbjct: 23 LSTKKKPPKS-GTKFIGKAALKEAQAALLEYLHSTRSLNIVDAENMCRNSPSFLHDLLAK 81
Query: 125 IDSGKDVT-------RSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEV 177
S RS+ R+LRY+PINEFEPFFES GL+ E +P LPR +++L+DD +
Sbjct: 82 SQSQTLTRSTTTTTKRSISRYLRYHPINEFEPFFESAGLTPPEYAPFLPRDMIYLNDDAL 141
Query: 178 LLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCC 237
L++N+H LC+YG+PR+KMG+++ ++FR+ GVL SKL YE LG+++ T+ +V+
Sbjct: 142 LMENYHALCNYGVPRTKMGRLFKLTPQLFRYKPGVLISKLRDYEKLGVARRTLACVVASS 201
Query: 238 PSLLIGGVDSRFVKVLEKLKELGFKN-DWIGR----YLPGKGSYNWDQVSETLDFLYKIG 292
P +L+GGVD FVKV+EKLK + K+ DWIG L +G +W V L L ++
Sbjct: 202 PCILVGGVDVGFVKVVEKLKGVVGKDVDWIGENLLDMLSDQGCCDWRIVLHVLCLLDRV- 260
Query: 293 YNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKN 352
Y+E QL + F +P++VFE SG V L L K GL +++V + + P+I +KF+ N
Sbjct: 261 YSEEQLGDFFIRHPSVVFEDSGGSVLSLINFLFKFGLSLDQVSLMLLEFPKIRVTKFLSN 320
Query: 353 LLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPL 412
L Q FL EI M +I ++ ++GS +LK T+ + L G++ LC++++DDPL
Sbjct: 321 LRQCFLFLTEIEMEALEIGEILQSQCLVLGSFTLKKTITLLTNLNAGKKRLCRVVRDDPL 380
Query: 413 --KLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQL 470
K + L + + ++ ++ ++ +K +F+L+LGYVENS+++ + ++ FRG+G +L
Sbjct: 381 VMKSWALGRRIQPFVNSYLEYESKE---QKKKFMLKLGYVENSKKMNETIRLFRGKGAEL 437
Query: 471 QERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYL 530
+ER D +V+AGLD VV +++ +P +LNQ+ D + KI+ L + L Y + + +FP++L
Sbjct: 438 EERLDFIVKAGLDYEVVCKMIRDSPRILNQTTDRINMKIENLVS-LGYSISDLASFPSFL 496
Query: 531 CYDMGRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
Y R+ R MY WL+E G + L+LSTI+ACSD FEK +V HP G +W+ LK
Sbjct: 497 SYSPRRVKLRFLMYDWLKEHGAVEAGLALSTIIACSDKAFEKLYVKRHPSGLQVWQDLKA 556
Query: 591 SSNS 594
+S
Sbjct: 557 QISS 560
>gi|15240177|ref|NP_196299.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|9759310|dbj|BAB09816.1| unnamed protein product [Arabidopsis thaliana]
gi|332003686|gb|AED91069.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 1141
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/522 (42%), Positives = 316/522 (60%), Gaps = 11/522 (2%)
Query: 79 RVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDS-------GKDV 131
R R AQ +FDY + TR L ++ AE +SKN+P F NLL K++ D+
Sbjct: 617 RTRNEIRKVAQVAMFDYFYQTRGLQFLVAESMSKNAPVFNDNLLKKLNGCDVDVDDDDDI 676
Query: 132 TRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIP 191
+++ RFL ++P+NEFEPF ESLGL SE S L+P MFL++D LL+N+HV +YGI
Sbjct: 677 VKAITRFLWFHPVNEFEPFLESLGLKPSEFSHLIPCDKMFLNEDAFLLENYHVFWNYGIG 736
Query: 192 RSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVK 251
R KMGK++ EA E+F ++ GVLASK+ +YE+LG SK + KL+ C PS+LIG ++ K
Sbjct: 737 REKMGKIFKEAREVFGYETGVLASKIKSYEDLGFSKLFLSKLIVCSPSILIGDMNVGLAK 796
Query: 252 VLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFE 311
V+E LK +GF DW+ L + SY+W + L FL + +E +L L + P L+FE
Sbjct: 797 VMEMLKAIGFGVDWVTENLSEEVSYDWSSMHRCLSFLRDLYVDENELCELIRKMPRLIFE 856
Query: 312 GSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILS-SKFVKNLLQAVGFLIEIGMGMKDI 370
SG+ +L G KLG +E+ SLF + PQ S KFV NL FL +I M +I
Sbjct: 857 DSGEWTLILAGFEAKLGSSRSELSSLFQKFPQCQSLGKFVLNLRHCFLFLKDIEMDDDEI 916
Query: 371 SNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP--LKLFHLASKTEVKIDEQ 428
+ +H+ +G LK T+ LK G+ LCQ+I+++P +K + + + +
Sbjct: 917 GKIFRLHSLWIGVSRLKQTSTLLINLKGGKGRLCQVIQENPEEMKKWIMGLRVQPLPATG 976
Query: 429 VDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVR 488
SK + KT+FLL LGY ENSEE+ +ALK FRG+G +L+ERF+ LV GL V+
Sbjct: 977 YKVNTKSKTM-KTQFLLDLGYKENSEEMERALKNFRGKGSELRERFNVLVSFGLTEKDVK 1035
Query: 489 NIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLR 548
++VK P +L Q+ D+LE K++YL L YPL ++V FP L Y + R+ R M+ WL+
Sbjct: 1036 DMVKACPSILTQACDILESKVNYLVKELGYPLSTLVTFPTCLKYTLQRMKLRFSMFSWLQ 1095
Query: 549 ERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
+RG A P L +STIL CSD F FV+ HP+GP E LKK
Sbjct: 1096 DRGKADPKLQVSTILVCSDKFFATRFVNRHPDGPKHLEDLKK 1137
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/501 (40%), Positives = 311/501 (62%), Gaps = 8/501 (1%)
Query: 79 RVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKID--SGKDVTRSLM 136
+++ R A+E + DY +STR L YM AE +SKNSP F+ NLL K+D + D+ +S+
Sbjct: 69 KITPNVRKLAEEAMLDYFYSTRGLQYMVAESMSKNSPIFIDNLLKKVDCVTASDINQSIT 128
Query: 137 RFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMG 196
R+LR++P+NEFEPF ES GL+ SE + L+P +FL ++ LL+N HVLC G+ ++G
Sbjct: 129 RYLRFHPVNEFEPFLESSGLNPSEYNHLVPCDKVFLDEEGFLLENHHVLCYSGVDPKRIG 188
Query: 197 KMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKL 256
K++ EA E+F ++ GVLASK+ AYE+LG S+ + KL+ C P +L+G + V+V++ L
Sbjct: 189 KIFKEAREVFSYETGVLASKIKAYEDLGFSRLFLSKLIVCSPRVLMGHTNIELVQVVKTL 248
Query: 257 KELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQK 316
+ LGF+ +W+ L +G +W V L L +I ++E +L L + P+L+FE SG+
Sbjct: 249 QSLGFEFEWVMENLSDEGP-DWSSVHRVLSLLREICFDEEKLYGLIRNCPSLLFENSGKW 307
Query: 317 VYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLM 376
+L G KLG +E+ SLF + P I K V NL Q FL EI M +I +
Sbjct: 308 TGILVGFETKLGASRSELCSLFQKFPLIQVEKCVSNLRQCFLFLKEIEMEDDEIHKVFRS 367
Query: 377 HAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP--LKLFHLASKTEVKIDEQVDCQNP 434
H+ +GSC LK ++ LK G+ +CQ+I+++P +K + + SK + VD ++
Sbjct: 368 HSWWLGSCKLKKTSSLLVFLKAGKTRVCQVIQENPEEMKKWTMGSKIQPLPATNVDIESK 427
Query: 435 SKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRA 494
S KT+FLL LGY ENSEE+ A+K FRG+G +L+ERF+ LV G V+++VK
Sbjct: 428 SM---KTQFLLDLGYKENSEEMETAMKNFRGKGSELRERFNVLVSLGFTKKDVKDMVKAC 484
Query: 495 PMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAK 554
P +L+Q+ D+LE K++YL L YPL ++V FP+ L + + R+ R M+ WL+ RG
Sbjct: 485 PTMLSQTCDILESKVNYLIKELGYPLSTLVDFPSCLKFTLQRMKLRFAMFSWLQARGKVD 544
Query: 555 PTLSLSTILACSDAKFEKYFV 575
+ +ST+LACSD F F+
Sbjct: 545 RKIKVSTMLACSDKIFVMSFM 565
>gi|297806695|ref|XP_002871231.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317068|gb|EFH47490.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1144
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/519 (42%), Positives = 314/519 (60%), Gaps = 7/519 (1%)
Query: 79 RVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDS-----GKDVTR 133
R R AQ +FDY + TR L ++ AE +S+N+P F NLL K++ DV +
Sbjct: 619 RTRNEIRKVAQVAMFDYFYQTRGLQFLVAESMSRNAPVFNDNLLKKLNGCDVDDDDDVVK 678
Query: 134 SLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRS 193
++ RFL ++P+NEFEPF ESLGL SE S L+P MFL++D LL+N+HV +YGI R
Sbjct: 679 AITRFLWFHPVNEFEPFLESLGLKPSEFSHLIPCDKMFLNEDAFLLENYHVFWNYGIGRE 738
Query: 194 KMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVL 253
KMGK++ EA E+F ++ GVLASK+ AYE+LG SK + KL+ C PS+LIG + K++
Sbjct: 739 KMGKIFKEAREVFGYETGVLASKIKAYEDLGFSKLFLSKLIVCSPSILIGNTNVGLAKIM 798
Query: 254 EKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGS 313
E LK + F DW+ L + SY+W + L FL + +E +L L + P L+FE S
Sbjct: 799 EMLKAISFGVDWVTENLSEEVSYDWSSMHRCLSFLRDMCVDENELRELIRKRPKLIFEDS 858
Query: 314 GQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILS-SKFVKNLLQAVGFLIEIGMGMKDISN 372
G+ +L G KLG +E+ SLF + PQ S KFV NL FL +I M +I
Sbjct: 859 GEWTMILAGFEAKLGSSRSELSSLFQKFPQSQSIGKFVSNLRHCFLFLKDIDMEADEIGK 918
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQ 432
+ +H+ +G LK T+ LK G+ LCQ+I+++P ++ V+ C+
Sbjct: 919 IFRLHSSWLGVTRLKQTSTLLINLKGGKGRLCQVIQENPEEMKKWIMGLRVQPLPATGCK 978
Query: 433 NPSKD-VEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIV 491
+K KT+FLL LGY ENSEE+ +ALK FRG+G +L+ERF+ LV G V+++V
Sbjct: 979 VDTKSKTMKTQFLLDLGYKENSEEMERALKNFRGKGSELRERFNVLVSFGFTEKDVKDMV 1038
Query: 492 KRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERG 551
K P +L+Q+ D+LE K++YL N L +PL ++V FP L Y + R+ R M+ WL++RG
Sbjct: 1039 KACPSILSQACDILESKVNYLINELGHPLLTLVTFPTCLKYTLQRMKLRFAMFSWLQDRG 1098
Query: 552 VAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKK 590
A P L++STIL CSD F FV+ HP+G E LKK
Sbjct: 1099 KADPKLAVSTILVCSDKFFATRFVNRHPDGAKHLEDLKK 1137
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/496 (41%), Positives = 302/496 (60%), Gaps = 7/496 (1%)
Query: 79 RVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKID--SGKDVTRSLM 136
R++ R A+E + DY +STR L YM AE +SKNSP F+ NLL K+D + D+ +S+
Sbjct: 69 RITPTIRKLAEEAMLDYFYSTRGLQYMVAESMSKNSPMFIDNLLKKVDCVTASDINQSIT 128
Query: 137 RFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMG 196
R+LR++P+NEFEPF ES GL +E S L+P +FL ++ LL+N HVLC G+ K+G
Sbjct: 129 RYLRFHPVNEFEPFLESSGLKPTEYSHLVPCDKVFLEEEGFLLENHHVLCYSGVDPKKIG 188
Query: 197 KMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKL 256
K++ EA E+F ++ GVLASK+ AYE+LG S+ + KL+ C P +LIG + KVL+ L
Sbjct: 189 KIFKEAREVFGYETGVLASKIKAYEDLGFSRYFLSKLIVCSPRILIGNTNVELAKVLKTL 248
Query: 257 KELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQK 316
K +GF+ DW+ L +GS +W V L +I ++E +L L + P LVFE SG+
Sbjct: 249 KSMGFEFDWVMENLSDEGSCDWSSVHRVLRLFREICFDEEELCGLIRKYPRLVFENSGKW 308
Query: 317 VYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLM 376
+L G KLG E+ SLF + P I K V NL Q FL EI M +I +
Sbjct: 309 TVILVGFETKLGSSRRELCSLFQKFPLIQVEKCVSNLRQCFLFLKEIEMEDDEIHKVFRS 368
Query: 377 HAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP--LKLFHLASKTEVKIDEQVDCQNP 434
H+ +GSC LK ++ LK G+ +CQ+I++ P +K + + SK + VD +
Sbjct: 369 HSWWLGSCRLKKTSSLLVFLKAGKTRVCQVIQESPEEMKKWTMGSKIQPLPATNVDIDS- 427
Query: 435 SKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRA 494
+ KT+FLL LGY ENSEE+ ALK FRG+ +L+ERF+ LV G V+++VK
Sbjct: 428 --KLMKTQFLLDLGYKENSEEMESALKNFRGKRSELRERFNVLVSLGFTEKDVKDMVKAC 485
Query: 495 PMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAK 554
P +L+Q+ D+LE K++YL N L YP ++V FP+ L + + R+ R M+ WL+ RG
Sbjct: 486 PTMLSQTCDILESKVNYLINELGYPHSTLVDFPSCLKFTLQRMKLRFAMFSWLQARGKVD 545
Query: 555 PTLSLSTILACSDAKF 570
+ +ST+LACSD F
Sbjct: 546 RKIKVSTMLACSDKIF 561
>gi|296085341|emb|CBI29073.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/352 (54%), Positives = 255/352 (72%), Gaps = 25/352 (7%)
Query: 15 QMITQINHFLVFF--PVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVSLAESTQPP 72
+MI Q+NH+ V P S S F P+R+R F R + K+ ES+ P
Sbjct: 99 EMICQLNHYGVVLRKPTSAHTLS--------FTPLRIRYFHCCRPANYLKL---ESSIP- 146
Query: 73 ASLVASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVT 132
RVSR+ RTEAQ+VLFDYLH TRS DAEH+SKNSP F+ LLSK+++ +DV
Sbjct: 147 ----GRRVSRVVRTEAQDVLFDYLHCTRSFHLTDAEHMSKNSPHFLQKLLSKVENEQDVA 202
Query: 133 RSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPR 192
RSL +FLRYNPINEFEPFFESLGL+ SE+S LLPR+LMFLSDD V+++N+HVLCDYGI R
Sbjct: 203 RSLSKFLRYNPINEFEPFFESLGLAPSEISALLPRNLMFLSDDCVMIENYHVLCDYGIAR 262
Query: 193 SKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKV 252
S +G+MY E IFR++ G+L SK+ AYE LGLS++TVIKLVSCCP LL+GGV+S+FV V
Sbjct: 263 SSIGRMYKEVQAIFRYELGLLGSKVRAYEGLGLSRSTVIKLVSCCPWLLVGGVNSQFVMV 322
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
L+++K LGF++DWIG YL GK SYNW ++ +T+DFL K+GY+E Q+++LFKTNP L+FEG
Sbjct: 323 LKRVKGLGFESDWIGGYLSGKSSYNWKRMHDTIDFLEKVGYSEEQMVSLFKTNPELLFEG 382
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIG 364
SG+K Y + G L ++G+K+ ++ S+ S + Q+L L+ FL+ +G
Sbjct: 383 SGKKFYAV-GFLFEIGMKVEDIVSIVSSHVQLLKH------LEKTTFLLRLG 427
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 178/337 (52%), Gaps = 32/337 (9%)
Query: 220 YENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRY---LPGKGSY 276
+E+LGL+ + + L+ +L+ D ++ L + G IGR + Y
Sbjct: 221 FESLGLAPSEISALLP--RNLMFLSDDCVMIENYHVLCDYGIARSSIGRMYKEVQAIFRY 278
Query: 277 NWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYS 336
+ + +G + ++ L P L+ G + ++ R+ LG + + +
Sbjct: 279 ELGLLGSKVRAYEGLGLSRSTVIKLVSCCPWLLVGGVNSQFVMVLKRVKGLGFESDWIGG 338
Query: 337 LFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKL 396
S SS K + + FL ++G + + ++ + EL+ S K V
Sbjct: 339 YLSGK----SSYNWKRMHDTIDFLEKVGYSEEQMVSLFKTNPELLFEGSGKKFYAVGFLF 394
Query: 397 KVGR--ESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSE 454
++G E + I+ L HL EKT FLLRLGYVENS+
Sbjct: 395 EIGMKVEDIVSIVSSHVQLLKHL---------------------EKTTFLLRLGYVENSD 433
Query: 455 EVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKN 514
E+ KALK FRGRGDQLQERFDCLVQAGLD NVV N++K+AP VLNQ+K V+EKKID L+N
Sbjct: 434 EMFKALKLFRGRGDQLQERFDCLVQAGLDCNVVSNMIKQAPSVLNQTKYVIEKKIDCLRN 493
Query: 515 YLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERG 551
L YPL+SVVAFP+YLCYD+ RIN R MYVWLR++G
Sbjct: 494 CLGYPLQSVVAFPSYLCYDIERINLRFSMYVWLRDKG 530
>gi|255559047|ref|XP_002520546.1| conserved hypothetical protein [Ricinus communis]
gi|223540260|gb|EEF41832.1| conserved hypothetical protein [Ricinus communis]
Length = 374
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 164/256 (64%), Positives = 211/256 (82%)
Query: 340 QNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVG 399
+NPQILS+K KN+LQA+ FL+ I M +++I+N++ H EL+ SCSLK P +VC +L V
Sbjct: 119 ENPQILSAKCEKNILQALEFLLYIRMRIEEIANIIYEHMELLCSCSLKRPNSVCKELNVT 178
Query: 400 RESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKA 459
++ LCQII++DP+K F+L SK++VK EQ+ ++ SK +K FLLRLGYVENS+E+ +A
Sbjct: 179 KDDLCQIIREDPMKFFNLVSKSKVKSSEQILSEDQSKKRDKVAFLLRLGYVENSDEMMRA 238
Query: 460 LKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYP 519
LK+FRGRGDQLQER+DCLVQAGLD NVV ++++ APMVLNQ+KDV+EKKID L L YP
Sbjct: 239 LKKFRGRGDQLQERYDCLVQAGLDCNVVSSLIRHAPMVLNQTKDVIEKKIDCLTRCLGYP 298
Query: 520 LESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHP 579
L SVVAFP YLCYD+ RINHR +MYVWL++RG AKP LSLSTILACSDA+FEKYFVD+HP
Sbjct: 299 LTSVVAFPTYLCYDIERINHRFRMYVWLKDRGAAKPMLSLSTILACSDARFEKYFVDIHP 358
Query: 580 EGPAMWESLKKSSNSS 595
EGPA+W+SL+ S +S
Sbjct: 359 EGPAVWKSLQNMSLTS 374
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Query: 16 MITQINHFLVFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVSLAESTQPPASL 75
M Q+NHFL F PV EK++ QN F+ ++VR F S+RLTH PK+S +EST+ SL
Sbjct: 1 MTAQLNHFLAFSPVFFEKSN--PTQNPCFLLLKVRFFSSARLTHNPKISHSESTESLISL 58
Query: 76 VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSL 135
+RVSR R EAQ+VLF+YLHSTRS + DA+HISKNSP F+ LL KID+ KDV RSL
Sbjct: 59 SGNRVSRTVRAEAQDVLFEYLHSTRSFSFTDADHISKNSPHFLQQLLFKIDNDKDVARSL 118
>gi|326504756|dbj|BAK06669.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 612
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 187/536 (34%), Positives = 286/536 (53%), Gaps = 25/536 (4%)
Query: 80 VSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRS----- 134
++R AQ DYLH R L DA HIS+ SP F+ LL K++ K VT++
Sbjct: 64 LNRWVHRAAQTTFRDYLHVKRGLCLTDANHISERSPIFLSELLEKVN--KTVTKAADQDG 121
Query: 135 ----------------LMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVL 178
L+R P+NEF PFFES+G+ E PLLP+ L FL+D +L
Sbjct: 122 EGPRFRSKVKKKVSKALVRLFHRRPVNEFRPFFESIGIRSGECDPLLPQDLTFLADAGML 181
Query: 179 LDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCP 238
L+++ L YG+ K+GK+Y++A E+F +GVL SKL A E LG K TVIKLV P
Sbjct: 182 LESYRALYSYGVAHDKIGKIYLKAAEVFSLGQGVLESKLEALEGLGFGKATVIKLVISTP 241
Query: 239 SLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQL 298
++L+ L+ L ++G + DWIG++L SYNW ++ E L F G+ + ++
Sbjct: 242 TVLVHDPAVELKTFLQWLDDIGVQPDWIGQFLAEYQSYNWQKIVEALQFWSDFGFTKDEI 301
Query: 299 LNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVG 358
+ +P L+ E SG ++ + + +G E+ L +P + N+
Sbjct: 302 GKAVRKHPDLLLEWSGGRLREVVSNMQNMGSGKRELLDLLLNHPNLKCEDVGWNISTGSF 361
Query: 359 FLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLA 418
L +IGM D+ + H + + +K T+ +L VG+ L +II +P +L +
Sbjct: 362 LLHDIGMSHDDVKKFLDSHGWIFAAAPMKAASTILGQLNVGKARLRRIIMKEPRQLMNY- 420
Query: 419 SKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLV 478
K K+ C+ EK EFL R+G+VE SE++ KA+K RG+G LQ+R++ LV
Sbjct: 421 -KIGSKVSRLPRCKPEPCVKEKREFLRRIGFVEGSEDMEKAIKAIRGKGANLQDRYNKLV 479
Query: 479 QAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRIN 538
+ GLD V ++VK AP +LNQ D + KI +L + + YP ++ AFP YL + + +
Sbjct: 480 EKGLDPEDVAHMVKMAPRILNQKTDAIAYKISFLVHVVGYPPSALPAFPRYLEFTVDKSK 539
Query: 539 HRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSNS 594
+ MY WL +RG+A P L+LST+L+ S+ +F K V P G +W LK+ S
Sbjct: 540 LKMLMYSWLLQRGLAAPQLTLSTVLSSSETEFIKAHVYKVPMGREVWWKLKQEGGS 595
>gi|255541094|ref|XP_002511611.1| conserved hypothetical protein [Ricinus communis]
gi|223548791|gb|EEF50280.1| conserved hypothetical protein [Ricinus communis]
Length = 561
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 266/526 (50%), Gaps = 20/526 (3%)
Query: 74 SLVASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKID-SGKDVT 132
S + S+ A EAQ+ L DYLHSTRSL + AEHISKNS + NL++ +D S D +
Sbjct: 22 SKIPSKYKAKAIREAQQALTDYLHSTRSLPFAYAEHISKNSLVSLSNLIANVDFSVSDFS 81
Query: 133 RSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPR 192
RS+ +FLRY+PINEFE F+ES+GL +E+ LP + F S+D LD L +G P
Sbjct: 82 RSVRKFLRYHPINEFEFFYESIGLDYNEVRNFLPSNKFFFSEDGSALDAACALASFGFPW 141
Query: 193 SKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKV 252
K+G +Y E + IF D L S+L ++ G S +VI + P +L G + +
Sbjct: 142 YKLGTLYKEDSSIFSRDPLELKSRLSGFKECGFSNTSVIGICLAFPHVLSGDLGGEIDAL 201
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+ LK F + +G + G W + + Y +G N+ ++ ++ + + +
Sbjct: 202 FDDLKR-AFIDFNMGSCVQGHVD-AWYDICLKIRVFYDLGLNKGKVGDIIGKSKTIFIDC 259
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
+ + + G+ +V L Q P++L L+ G L G ++++
Sbjct: 260 PIEVLIKKTEYFCRFGVSKVDVGMLLLQKPELLCFDLETPLISVKGILEHFGFNVEELEV 319
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVD-- 430
++ + +MG + V + + + IKD +L LAS DE +D
Sbjct: 320 VIHKYPHVMGRNKMANLPHVMRAMDLHLWFFNK-IKDGYHEL--LASYALRDPDEDLDKE 376
Query: 431 ----------CQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQA 480
+ P+ + K +F+ +G+ EN+ V K L G +LQERFDCL++
Sbjct: 377 FSDSLERIRVSRTPTHTMSKLDFVHGIGFGENALTV-KVLTHLHGSSSELQERFDCLLRL 435
Query: 481 GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINH 539
G+ + + +++ P +LNQ ++LE+K+++L + L+ + FPA+LC+++ RI
Sbjct: 436 GIGFSKLCTMIRTMPKILNQQSEILEQKVNFLCQEMGSSLQELYIFPAFLCFNLENRIKP 495
Query: 540 RCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
R + ++WL E+GV+ T S+S+I+A S+ F +HP P W
Sbjct: 496 RYRFHMWLTEKGVSTQTYSISSIVATSEKNFVARLYGIHPAVPKHW 541
>gi|297817338|ref|XP_002876552.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
lyrata]
gi|297322390|gb|EFH52811.1| hypothetical protein ARALYDRAFT_907562 [Arabidopsis lyrata subsp.
lyrata]
Length = 560
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 269/526 (51%), Gaps = 22/526 (4%)
Query: 76 VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKID-SGKDVTRS 134
V S+ LA +AQ+ + DYLH+TRSL Y AE I+ N+ + NL+ K+D S ++S
Sbjct: 25 VPSKYKSLAIGKAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKS 84
Query: 135 LMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSK 194
L + L Y+PINEFE FFES+G+ SE+ LP F S+D +LD L +G P +K
Sbjct: 85 LRKHLSYHPINEFEFFFESIGIDYSEVCEFLPEKKFFFSEDRTVLDAACALSGFGFPWNK 144
Query: 195 MGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGG--VDSRFVKV 252
+GK+Y E +F G + S+L +++LG S VI P L GG + S + +
Sbjct: 145 LGKLYKEERLVFVQSPGEIDSRLLKFKDLGFSTVAVIGTCLAFPHALCGGGELGSEILCL 204
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
KLK L +++ ++L + +W VS + Y +G ++ L N +L E
Sbjct: 205 FVKLKRLF--DEFDSQHLCEENVDSWLAVSRKIRVFYDLGCENEEMWELMGRNKSLFLEY 262
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
S + + + G++ +V L +NP I++ K ++ G L G+ ++
Sbjct: 263 SEEALVKKAEYFCRFGVRKEDVALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDA 322
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKD------------DPLKLFHLASK 420
+ + ++G LK V + + E + I+K+ DP + L +
Sbjct: 323 VAQKYPYVLGRNKLKNLPYVLRAIDL-HERIVDILKNGSHHLLASYSVMDPYE--DLDRE 379
Query: 421 TEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQA 480
+ ++E + + + +++K +FL +G+ EN + K L+ G +LQ+RF L+ +
Sbjct: 380 YQEGLEELQNSRTKTHNIQKLDFLHEIGFGENGMTM-KVLQHVHGTAVELQDRFQILLDS 438
Query: 481 GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINH 539
G+ + + +++ AP +LNQ ++ K+ +L + L+ + FPAYLC+D+ RI+
Sbjct: 439 GIIFSKICLLIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLDVFPAYLCFDLENRISP 498
Query: 540 RCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
R + + WL E+G+++ + S+++I+A S+ F +HP P W
Sbjct: 499 RFRFHKWLVEKGLSEKSYSIASIVATSEKAFIARLYGIHPAIPKHW 544
>gi|15232313|ref|NP_191599.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|7287988|emb|CAB81826.1| putative protein [Arabidopsis thaliana]
gi|332646534|gb|AEE80055.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 558
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 263/526 (50%), Gaps = 22/526 (4%)
Query: 76 VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKID-SGKDVTRS 134
V S+ LA +AQ+ + DYLH+TRSL Y AE I+ N+ + NL+ K+D S ++S
Sbjct: 25 VPSKYKSLAIGKAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKS 84
Query: 135 LMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSK 194
L + L Y+PINEFE FFES+G+ SE+S LP F S+D +LD L +G P +K
Sbjct: 85 LRKHLSYHPINEFEFFFESIGIDYSEVSEFLPEKKFFFSEDRTVLDAAFALSGFGFPWNK 144
Query: 195 MGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGG--VDSRFVKV 252
+GK+Y E +F G + S+L ++++G S VI P L GG + S +
Sbjct: 145 LGKLYKEERLVFVQRPGEIESRLLKFKDIGFSTVAVIGTCLAIPRTLCGGGELGSEIRCL 204
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
KLK L +++ +L + +W VS + Y +G ++ L N +L E
Sbjct: 205 FVKLKRLF--DEFDSHHLFEENVDSWLAVSRKIRIFYDLGCENEEMWELMCRNKSLFLEY 262
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
S + + G + G+ + L +NP I++ K ++ G L G+ ++
Sbjct: 263 SEEALMNKAGYFCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDA 322
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVD-- 430
+ + + G LK V + + E + I+K+ L LAS T + DE ++
Sbjct: 323 VAQKYPYVFGRNQLKNLPYVLRAIDL-HERIFDILKNGNHHL--LASYTLMDPDEDLERE 379
Query: 431 ----------CQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQA 480
+ +++K +FL +G+ EN + K L+ G +L +RF L+ +
Sbjct: 380 YQEGLEELQNSRTKRHNIQKLDFLHEIGFGENGITM-KVLQHVHGTAVELHDRFQILLNS 438
Query: 481 GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINH 539
G+ + + +++ AP +LNQ ++ K+ +L + L+ + FPAYLC+D+ RI+
Sbjct: 439 GIIFSKICMLIRSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISP 498
Query: 540 RCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
R + + WL E+G ++ + S+++I+A S+ F +HP P W
Sbjct: 499 RFRFHKWLVEKGFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHW 544
>gi|225453434|ref|XP_002272894.1| PREDICTED: uncharacterized protein LOC100244389 [Vitis vinifera]
Length = 561
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 160/562 (28%), Positives = 283/562 (50%), Gaps = 32/562 (5%)
Query: 43 FFIPVRVRSFC---SSRLTHQPKVSLAESTQPPASLVASRVSRLARTEAQEVLFDYLHST 99
F + + S C S +L+ PK S S + S+ A AQ+ L DY HST
Sbjct: 3 FLSTITITSLCTYLSRQLSSLPKNS-------NLSHIPSKHRSQAVLLAQKALTDYFHST 55
Query: 100 RSLGYMDAEHISKNSPDFVLNLLSKID-SGKDVTRSLMRFLRYNPINEFEPFFESLGLSQ 158
RSL ++ AEHI +NS + + +SK++ S +S RFLRY+PINEFE FFES+G++Q
Sbjct: 56 RSLPFLYAEHIGRNSFYSLYDPISKVEFSLSSFAKSFERFLRYHPINEFEFFFESIGITQ 115
Query: 159 SELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLW 218
E+S LP + F ++D +L+ L +G P +K+G +Y IF D L+ +L
Sbjct: 116 KEISGFLPPNKFFFAEDGRILNAAGALSGFGFPWNKLGILYKAEASIFDKDSDDLSRRLC 175
Query: 219 AYENLGLSKNTVIKLVSCCPSLLIG----GVDSRFVKVLEKLKELGFKNDWIGRYLPGKG 274
+++ GLS +VI + P +L G GV++ + + LK + D +G ++ +
Sbjct: 176 RFKDYGLSNVSVIGICLAFPFVLGGKGDLGVEAG--ALFDDLKRVFVDFD-LGSFVE-EN 231
Query: 275 SYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEV 334
W ++ + Y +G + ++ L + + E S + + +L ++ +
Sbjct: 232 VDAWYEICRKIRLFYDLGCEKGKIGELMGRSRNIFLEYSEEVLVRKMDFFCRLNVRKAGI 291
Query: 335 YSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCS 394
L + P+ILS ++ +GFL G+G++ ++ M+ ++G + V
Sbjct: 292 GLLLLECPEILSFDLEAPVISVMGFLKHFGLGLQKSKSVARMYPYVLGRNKMANLPHVMR 351
Query: 395 KLKVGRESLCQIIKDDPLKLF--HLASKTEVKIDEQV--------DCQNPSKDVEKTEFL 444
L + E ++K+ +L ++ S + +DE + P+ + K FL
Sbjct: 352 ALDL-HEWFFGMMKNGNHRLLGNYVLSHPDEDLDEDYRVGLEKIQSSRTPAHTINKLNFL 410
Query: 445 LRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDV 504
+GY EN + K L+ G +LQERF+CL+ AGL+ + + ++ + +LNQ ++
Sbjct: 411 HGIGYGENLLTM-KVLEHVHGTSSELQERFNCLLHAGLEFSKLCTMISFSAKILNQKPEI 469
Query: 505 LEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTIL 563
LE+K+++L + L+ + FPAYLC+++ RI R + +VWL E G+ SL++++
Sbjct: 470 LERKVNFLIQEMGLSLQYLDVFPAYLCFNLDNRIKPRYRCHVWLAENGLCTKNYSLASMI 529
Query: 564 ACSDAKFEKYFVDVHPEGPAMW 585
A S+ F +HP P +W
Sbjct: 530 ATSEKSFIARLYGIHPAVPKLW 551
>gi|224146847|ref|XP_002336351.1| predicted protein [Populus trichocarpa]
gi|222834777|gb|EEE73240.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/140 (73%), Positives = 119/140 (85%), Gaps = 1/140 (0%)
Query: 456 VTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNY 515
+ +ALK FRGRGDQLQERFDCLVQAGLD NVV + +K+APMVLNQ+KDV+EKKID L N
Sbjct: 1 MARALKMFRGRGDQLQERFDCLVQAGLDYNVVSSFIKQAPMVLNQTKDVIEKKIDCLTNL 60
Query: 516 LCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
C + S+VAFP+YLCYDM RIN R +MY WL+E+G AKP LSLSTILACSDA+F KYFV
Sbjct: 61 GC-SVNSLVAFPSYLCYDMERINLRFRMYTWLKEKGAAKPKLSLSTILACSDARFIKYFV 119
Query: 576 DVHPEGPAMWESLKKSSNSS 595
DVHPEGPAMWESL+ +S SS
Sbjct: 120 DVHPEGPAMWESLRNTSASS 139
>gi|224075774|ref|XP_002335846.1| predicted protein [Populus trichocarpa]
gi|222835772|gb|EEE74207.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 166/264 (62%), Gaps = 11/264 (4%)
Query: 331 MNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPK 390
MN++ S+F Q PQ+ +F NL FL EI M +I N+ H ++GSC LK P
Sbjct: 1 MNQICSMFLQFPQMEFEEFFSNLRHCFLFLKEIQMEAHEIRNIFHSHPLMLGSCRLKKPN 60
Query: 391 TVCSKLKVGRESLCQIIKDDP--LKLFHLASKTEVKIDEQVDCQNP--SKDVEKTEFLLR 446
T+ L + +C++I++ P LK + + SK E QN ++KT+FLL
Sbjct: 61 TLRLALHAADKRMCEVIQESPQVLKKWVMGSKVE-------RLQNLILKSRMQKTKFLLD 113
Query: 447 LGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLE 506
LG V++S E+ KALK FRG G ++QERFDC+V+AGL V ++K +P +LNQ+KDVLE
Sbjct: 114 LGIVDDSNEIGKALKVFRGSGAKIQERFDCIVEAGLSRKDVCEMIKASPQILNQTKDVLE 173
Query: 507 KKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLSLSTILACS 566
KID+L N + YP+ +V FP+YL Y M R+ R MY WL+++G + P LSLST+++ S
Sbjct: 174 MKIDFLVNKVGYPVSYLVTFPSYLNYTMERVELRLAMYNWLKDQGKSVPMLSLSTVISLS 233
Query: 567 DAKFEKYFVDVHPEGPAMWESLKK 590
D KF +V+ HP GP +W++LKK
Sbjct: 234 DKKFINEYVNSHPRGPEIWQNLKK 257
>gi|357507879|ref|XP_003624228.1| hypothetical protein MTR_7g080620 [Medicago truncatula]
gi|355499243|gb|AES80446.1| hypothetical protein MTR_7g080620 [Medicago truncatula]
Length = 737
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 151/533 (28%), Positives = 257/533 (48%), Gaps = 54/533 (10%)
Query: 87 EAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKID-SGKDVTRSLMRFLRYNPIN 145
EAQ+ L DYLH+T+S+ + AEHI N+ + NL+SK++ S + ++ R +R++PIN
Sbjct: 60 EAQKALTDYLHNTKSIPFTYAEHIGNNTFCSLTNLISKVNFSPPTFSNNIKRVIRFHPIN 119
Query: 146 EFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEI 205
EFE FFES+G+ + +S LLP +F S+D LL+ VLCD+G P K+G +Y+E + I
Sbjct: 120 EFEVFFESIGIDYTLVSDLLPNDKLFFSEDRTLLEAACVLCDFGFPWEKLGVLYMEKSSI 179
Query: 206 FRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLL----------IGGVDSRFVKVLEK 255
F L +L ++ G VI + P +L + G+D F +
Sbjct: 180 FGKSVEELKLRLCWFKRFGFGNVEVIGICLAFPFVLSEEVDQIQKGVFGIDGLFSDL--- 236
Query: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315
+L F ++ +G Y+ G +W +V L + + + + L N ++ +
Sbjct: 237 --KLIFLDNSLGSYVEGNVD-SWYEVCRKLRMFFDLSGWKGNVGELMGKNKSIFVDHKED 293
Query: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
++ L + G K EV L Q P++L K ++ + L GM KD+ +++
Sbjct: 294 EIVHRVEYLCRFGGKKEEVALLILQCPEVLKLDLEKTVINVLELLKHFGMSSKDLEDVIE 353
Query: 376 MHAELMGSCSLKGPKTV----------CSKLKVGRESLCQ--IIKD----------DPLK 413
++G+ + V C KLK G L I D D L+
Sbjct: 354 NFGHVLGTIRMVNLPNVMRAMGLQEWFCDKLKGGHHQLLADYIASDRNEDRDKVYQDGLR 413
Query: 414 LFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQER 473
H+ S+ V + K FL RLG+ EN+ + L G +LQER
Sbjct: 414 RIHI-SRARV------------HSINKLNFLHRLGFGENALTMN-LLDCLHGTSSELQER 459
Query: 474 FDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYD 533
FDCL+++ ++ + + +V++ P +LNQ+ +++E+K+ + + L+ + FPA L Y
Sbjct: 460 FDCLLRSRIEFSKLCMMVRKTPRILNQNYEIIEQKVIFFNQKMGTTLDYLETFPAMLHYH 519
Query: 534 M-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
+ RI R + + WL ERG++ S+ +++ S+ KF +HP P W
Sbjct: 520 LDDRIIPRYRFHTWLTERGLSYRKYSVQSMITDSEKKFVARVFKIHPAAPKHW 572
>gi|147841403|emb|CAN60176.1| hypothetical protein VITISV_026394 [Vitis vinifera]
Length = 545
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 157/553 (28%), Positives = 275/553 (49%), Gaps = 30/553 (5%)
Query: 43 FFIPVRVRSFC---SSRLTHQPKVSLAESTQPPASLVASRVSRLARTEAQEVLFDYLHST 99
F + + S C S +L+ PK S S + S+ A AQ+ L DY HST
Sbjct: 3 FLSTITITSLCTYLSRQLSSLPKNS-------NLSHIPSKHRSQAVLLAQKALTDYFHST 55
Query: 100 RSLGYMDAEHISKNSPDFVLNLLSKID-SGKDVTRSLMRFLRYNPINEFEPFFESLGLSQ 158
RSL ++ AEHI +NS + + +SK++ S +S RFLRY+PINEFE FFES+G++Q
Sbjct: 56 RSLPFLYAEHIGRNSFYSLYDPISKVEFSLSSFAKSFERFLRYHPINEFEFFFESIGITQ 115
Query: 159 SELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLW 218
E+S LP + F ++D +L+ L +G P +K+G +Y IF D L+ +L
Sbjct: 116 KEISGFLPPNKFFFAEDGRILNAAGALSGFGFPWNKLGILYKAEASIFDKDSDDLSRRLC 175
Query: 219 AYENLGLSKNTVIKLVSCCPSLLIG----GVDSRFVKVLEKLKELGFKNDWIGRYLPGKG 274
+++ GLS +VI + P +L G GV++ + + LK + F B +G ++ +
Sbjct: 176 RFKDYGLSNVSVIGICLAFPFVLGGKGDLGVEAG--ALFDDLKRV-FVBFDLGSFVE-EN 231
Query: 275 SYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEV 334
W ++ + Y +G + ++ L + + E S + + +L ++ +
Sbjct: 232 VDAWYEICRKIRLFYDLGCEKGKIGELMGRSRNIFLEYSEEVLVRKMDFFCRLNVRKAGI 291
Query: 335 YSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMV-LMHAELMGSCSLKGPKTVC 393
L + P+ILS ++V + +G ++N+ +M A + K
Sbjct: 292 GLLLLECPEILSFDLEAPKSKSVARMYPYVLGRNKMANLPHVMRALDLHEWFFGMMKNGN 351
Query: 394 SKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENS 453
+L +G L +D L V +++ + P+ + K FL +GY EN
Sbjct: 352 HRL-LGNYVLSHPDED-------LDEDYRVGLEKIQSSRTPAHTINKLNFLHGIGYGENL 403
Query: 454 EEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLK 513
+ K L+ G +LQERF+CL+ AGL+ + + ++ + +LNQ ++LE+K+++L
Sbjct: 404 LTM-KVLEHVHGTSSELQERFNCLLHAGLEFSKLCTMISFSAKILNQKPEILERKVNFLI 462
Query: 514 NYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
+ L+ + FPAYLC+++ RI R + +VWL E G+ SL++++A S+ F
Sbjct: 463 QEMGLSLQYLDVFPAYLCFNLDNRIKPRYRXHVWLAENGLCTKNYSLASMIATSEKSFIA 522
Query: 573 YFVDVHPEGPAMW 585
+HP P +W
Sbjct: 523 RLYGIHPAVPKLW 535
>gi|224136494|ref|XP_002326874.1| predicted protein [Populus trichocarpa]
gi|222835189|gb|EEE73624.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 262/539 (48%), Gaps = 24/539 (4%)
Query: 45 IPVRV-RSFCSSRLTHQPKVSLAESTQPPASLVASRVSRLARTEAQEVLFDYLHSTRSLG 103
IP+ + +FC + PK +P + V + A AQ+ L DYLHSTRSL
Sbjct: 6 IPISIYTTFCRHFSSSLPK-------RPIFTSVPWKYKNQAIKLAQQALTDYLHSTRSLP 58
Query: 104 YMDAEHISKNSPDFVLNLLSKID-SGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELS 162
Y A+ ISKNS + NL+S I + SL ++LRY+PINE E F+ES+G+ E+S
Sbjct: 59 YSYADQISKNSLVSLSNLVSNIHFTSPTFATSLQKYLRYHPINELEFFYESIGIDYDEVS 118
Query: 163 PLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYEN 222
L F+S++ ++ VLCD+G P +K+G +Y E +F + S+L +
Sbjct: 119 GFLSNDKFFISEEGSAINVSCVLCDFGFPWNKLGMLYKEEKRVFSMSEEEVKSRLCGLKG 178
Query: 223 LGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVS 282
S +VI + P +L G + + + LK + D + + G W +V
Sbjct: 179 FRFSTTSVIGISLAFPFVLRGELSGEIGALFDDLKRVFVDFD-LESCVEGNVD-AWYEVC 236
Query: 283 ETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNP 342
+ Y +G + ++ L + + + + + K G++ +V L P
Sbjct: 237 RKIRVFYDLGCEKGKVGELMGKSKRIFVDYPVEVLVQKAEFFCKFGVRKEDVGLLLLTKP 296
Query: 343 QILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRES 402
IL + ++ G L G+ +++ ++ + + G + V +++ E
Sbjct: 297 GILDFQLEGQVISVKGLLKHFGLSAEELKSVAQNYGHVFGRNKMANLPHVMRAMEL-HEW 355
Query: 403 LCQIIKDDPLKLF--HLASKTEVKIDEQ-------VDC-QNPSKDVEKTEFLLRLGYVEN 452
IKD +L ++ S + +DE+ + C + P + K EFL +G+ EN
Sbjct: 356 FFNKIKDGNHQLLASYVMSDPDEDLDEKYRDSLERIQCTRTPMHTMNKLEFLHAIGFGEN 415
Query: 453 SEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYL 512
+ + K L G +LQER DCL++ G+ + + ++++ P +L+Q ++L++K++YL
Sbjct: 416 ALTI-KVLTDLHGTSSELQERVDCLLRYGIVFSKLCSMIRMMPKILSQKPEILQQKLNYL 474
Query: 513 KNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
+ L+ + FP++LC+++ RI R + ++WL ERG K S+++I+A SD F
Sbjct: 475 CEDMKSSLQYLDIFPSFLCFNLENRIKPRHRFHMWLTERGFCKQEYSIASIVATSDKSF 533
>gi|356503273|ref|XP_003520435.1| PREDICTED: uncharacterized protein LOC100800581 [Glycine max]
Length = 566
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 254/531 (47%), Gaps = 23/531 (4%)
Query: 76 VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKID----SGKDV 131
+ + + A ++ Q+ L DYLH+TRS+ Y A I+KNS + L++ + S
Sbjct: 26 IPWKYKKFAISQGQKSLTDYLHATRSIPYAYANQIAKNSLTSLTTLITTLGTSSFSPLHF 85
Query: 132 TRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIP 191
+L +FL Y+PINEFE FFES+G+ S LLP+ F S D+ LL VL ++G P
Sbjct: 86 PHNLNKFLMYHPINEFEFFFESIGIHPSNFHSLLPQDKFFFSQDDTLLSAACVLYEFGFP 145
Query: 192 RSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVK 251
++G +YVE+ L ++ ++ GL V+ + P + G V+
Sbjct: 146 WDRLGVLYVESGCFLNWGASELKDRVCGFKRYGLCNEQVVGVCMAFPFVFDGQKGDDEVE 205
Query: 252 VLEKLKELGFKNDWIGRYLPGKGSY---NWDQVSETLDFLYKI--GYNEVQLLNLFKTNP 306
L + L F + + GKG+Y +W +V + Y + G + V+L+
Sbjct: 206 ALFRDLGLLFGEFGLAECVEGKGNYSVDDWIRVCRKIRLFYDLNGGKSLVELIGRNNGGG 265
Query: 307 ALVFEGSGQKVYVLFGRLL-KLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGM 365
V G++ V + G K +V L P++L ++ V L GM
Sbjct: 266 VGVIVEHGEEELVQAAEYFCRFGAKKEDVARLIVDGPELLELDLEAWVVDVVKLLKYFGM 325
Query: 366 GMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKL---FHLASKTE 422
D+ ++ +A ++G+ + V L + RE IKD +L F + E
Sbjct: 326 RSDDVEDVRRDYAHVLGTVKMGNLPNVMRALGL-REWFFDKIKDGNHQLLVSFVTSCPGE 384
Query: 423 VKIDEQVD-------CQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFD 475
+ + + + P+ ++ K FL +G+ EN+ + Q G +LQ+RF+
Sbjct: 385 FQDEGYLGRLKAIKASRTPTHNISKLNFLHAIGFGENALTMN-VYAQMHGTSGKLQKRFN 443
Query: 476 CLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM- 534
CL++ G++ + + ++ P +L+Q+ LE+K+++ + Y LE ++ FPA+LC+D+
Sbjct: 444 CLLRLGIEFSKICKMITIHPKILSQNPQNLEQKVNFFCQEMGYSLEHLITFPAFLCFDLE 503
Query: 535 GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
RI R + ++W+ E+G++ S+++++A SD F + +HP W
Sbjct: 504 NRIKPRYRFHMWIMEKGLSSKNYSITSMVATSDKNFVARALKIHPAALKHW 554
>gi|356523046|ref|XP_003530153.1| PREDICTED: uncharacterized protein LOC100812245 [Glycine max]
Length = 560
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 252/531 (47%), Gaps = 24/531 (4%)
Query: 76 VASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGK----DV 131
+ + + A + Q+ L DYLH+TR + Y A+ I+KNS + L++ G
Sbjct: 22 IPWKYKKFAIAQGQKSLTDYLHATRCIPYAYADKIAKNSLTSLTTLITTTLGGSFSPPHF 81
Query: 132 TRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIP 191
+L +FLRY+PINEFE FFES+G+ S+L LLP+ F S+D+ LL+ VL ++G P
Sbjct: 82 PHNLNKFLRYHPINEFEFFFESIGIHPSKLGSLLPQDNFFFSEDDTLLNAARVLHEFGFP 141
Query: 192 RSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVK 251
++G +YVE+ F+ L +L ++ G V+ + P + G V+
Sbjct: 142 WDRLGILYVESGCFFKCGASELKGRLCGFKRYGFCNAQVVGICLAFP-FVFDGQKGDEVE 200
Query: 252 VLEKLKELGFKNDWIGRYLPGKGSY---NWDQVSETLDFLYKI--GYNEVQL-LNLFKTN 305
L L F + + GKG+ +W V + Y + G + V+L
Sbjct: 201 ALFCDLGLLFGELGLAECVEGKGNNSVDDWIGVCRKIRLFYDLNGGRSLVELVGGNNGVG 260
Query: 306 PALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGM 365
++ E +++ G K +V L ++L ++ V L GM
Sbjct: 261 VGVILEHGEEELVQATEYFCSFGAKKEDVARLIVDGRELLELDLKTRVVDVVKLLKYFGM 320
Query: 366 GMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP---LKLFHLASKTE 422
D+ ++ +A ++G+ + V L + E IKD L F + E
Sbjct: 321 SSDDVEDVRRDYAHVLGTVKMGNLPNVMRALGL-HEWFFGKIKDGNHCLLVSFVASYPNE 379
Query: 423 VKIDEQVDC-------QNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFD 475
V+ + + C + P+ ++ K FL +G+ EN+ + Q G +LQ+RFD
Sbjct: 380 VQDEGYLGCLKAIQESRTPTHNISKLNFLHAIGFGENALTMN-VYAQMHGTSVELQKRFD 438
Query: 476 CLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM- 534
CL++ G++ + V ++ P +L+Q+ LE+K+++ + + LE +V FPA+LC+D+
Sbjct: 439 CLLRLGIEFSKVCKMITIYPKILSQNPQNLEQKVNFFCQEMGHSLEHLVTFPAFLCFDLE 498
Query: 535 GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
RI R + ++W+ E+G++ S+++++A S+ F +HP W
Sbjct: 499 NRIKPRYRFHMWIMEKGLSSKKYSIASMVATSNKNFVARAFKIHPAALKHW 549
>gi|125558050|gb|EAZ03586.1| hypothetical protein OsI_25722 [Oryza sativa Indica Group]
Length = 575
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 157/529 (29%), Positives = 246/529 (46%), Gaps = 61/529 (11%)
Query: 94 DYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRS------LMRFLRYNPINEF 147
+YLH+TR L A+ I+ SP + L+ + + R+ L R L ++P+NE
Sbjct: 46 EYLHATRCLPSSHADTIAARSPRSLHAFLAGLPAVPSSLRTSAFPSLLRRHLAFHPLNEL 105
Query: 148 EPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFR 207
F ES+GL + S LMFL+D LL L +G P S++G ++ T + R
Sbjct: 106 PFFLESIGLPPTTRS-----DLMFLADHPSLLPAVAALAHFGFPWSRLGLLF--PTVLLR 158
Query: 208 HDRGVLASKLWAYEN-LG-LSKNTVIKLVSCCPSLLIGGVDS--RFVKVLEKLKELGFKN 263
++ S+L + E LG L + +I PSLL + S R V L K+
Sbjct: 159 LPPDLITSRLASLEACLGPLPRAAIIAACLAFPSLLENDLSSSDRLVDDLGKV------- 211
Query: 264 DWIGRYLPGKGSYN----WDQVSETLDFLYKIGYNEVQLLNLFKTNPALVF-EGSGQKVY 318
GR PG G+ N + V Y G + +L N VF E +++
Sbjct: 212 --FGRLGPGLGTSNDIDAFLGVCRRTWMFYDAGSEVGGIGDLVGCNNQRVFLELEEERI- 268
Query: 319 VLFGRLLK----LGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMV 374
G++LK LG+ EV NP + +F ++ +L +G+ + +++ V
Sbjct: 269 ---GKMLKFFKGLGMAGEEVGRFLLTNPMVFYLEFGDVVISVPEYLRRVGLAVDEVNAAV 325
Query: 375 LMHAELMGSCSLKGPKTVC----------SKLKVGRESLCQIIKDDPLKLFHLASKTEVK 424
H ++G L+ V K+ G ESL + D L+ ++ E++
Sbjct: 326 EKHPYVVGKNLLQNLPGVLRAMELDHWFLEKISDGGESLRYLFPDFVLE--DVSYDVEIE 383
Query: 425 -------IDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCL 477
I + D + D K EFL +GY EN E TK + D LQERFDCL
Sbjct: 384 RAFLGGMIKMKADKRAQHID-GKLEFLKSIGYGEN-EIATKIIAVLHSNRDTLQERFDCL 441
Query: 478 VQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GR 536
++ GL+ ++ IV P +LNQ K +L K++Y+ L Y +E + FPA+LC+D+ R
Sbjct: 442 LERGLEYKMLCQIVSVFPKILNQGKKMLNDKLNYMTKELGYSVEYLELFPAFLCFDLEKR 501
Query: 537 INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
+ R M WLRE G+ + TL+ +T+LA S+ +F +VHP P +W
Sbjct: 502 VKPRYTMLRWLRENGLLRRTLAPATVLANSEKRFISNLYNVHPAAPKLW 550
>gi|115471685|ref|NP_001059441.1| Os07g0409400 [Oryza sativa Japonica Group]
gi|23617035|dbj|BAC20725.1| unknown protein [Oryza sativa Japonica Group]
gi|113610977|dbj|BAF21355.1| Os07g0409400 [Oryza sativa Japonica Group]
Length = 575
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 156/529 (29%), Positives = 246/529 (46%), Gaps = 61/529 (11%)
Query: 94 DYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRS------LMRFLRYNPINEF 147
+YLH+TR L A+ I+ SP + L+ + + R+ L R L ++P+NE
Sbjct: 46 EYLHATRCLPSSHADTIAARSPRSLHAFLAGLPAVPSSLRTSAFPSLLRRHLAFHPLNEL 105
Query: 148 EPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFR 207
F ES+GL + S LMFL+D LL L +G P S++G ++ T + R
Sbjct: 106 PFFLESIGLPPTTRS-----DLMFLADHPSLLPAVAALAHFGFPWSRLGLLF--PTVLLR 158
Query: 208 HDRGVLASKLWAYEN-LG-LSKNTVIKLVSCCPSLLIGGVDS--RFVKVLEKLKELGFKN 263
++ S+L + E LG L + +I PSLL + S R V L K+
Sbjct: 159 LPPDLITSRLASLEACLGPLPRAAIIAACLAFPSLLENDLSSSDRLVDDLGKV------- 211
Query: 264 DWIGRYLPGKGSYN----WDQVSETLDFLYKIGYNEVQLLNLFKTNPALVF-EGSGQKVY 318
GR PG G+ N + V Y G + +L N VF E +++
Sbjct: 212 --FGRLGPGLGTSNDIDAFLGVCRRTWMFYDAGSEVGGIGDLVGCNNQRVFLELEEERI- 268
Query: 319 VLFGRLLK----LGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMV 374
G++LK LG+ EV NP + +F ++ +L +G+ + +++ V
Sbjct: 269 ---GKMLKFFKGLGMAGEEVGRFLLTNPMVFYLEFGDVVISVPEYLRRVGLAVNEVNAAV 325
Query: 375 LMHAELMGSCSLKGPKTVC----------SKLKVGRESLCQIIKDDPLKLFHLASKTEVK 424
H ++G L+ V K+ G ESL + D L+ ++ E++
Sbjct: 326 EKHPYVVGKNLLQNLPGVLRAMELDHWFLEKISDGGESLRYLFPDFVLE--DVSYDVEIE 383
Query: 425 -------IDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCL 477
I + D + D K EFL +GY EN + TK + D LQERFDCL
Sbjct: 384 RAFLGGMIKMKADKRAQHID-GKLEFLKSIGYGEN-KIATKIIAVLHSNRDTLQERFDCL 441
Query: 478 VQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GR 536
++ GL+ ++ IV P +LNQ K +L K++Y+ L Y +E + FPA+LC+D+ R
Sbjct: 442 LERGLEYKMLCQIVSVFPKILNQGKKMLNDKLNYMTKELGYSVEYLELFPAFLCFDLENR 501
Query: 537 INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
+ R M WLRE G+ + TL+ +T+LA S+ +F +VHP P +W
Sbjct: 502 VKPRYTMLRWLRENGLLRRTLAPATVLANSEKRFISNLYNVHPAAPKLW 550
>gi|224083320|ref|XP_002335412.1| predicted protein [Populus trichocarpa]
gi|222834134|gb|EEE72611.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 109/139 (78%)
Query: 365 MGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVK 424
MG++ I+N++ EL+ S +LKGP T+ + K ++SLCQI+ ++PL+LFHL SK+EV+
Sbjct: 1 MGVEGIANIISTQMELLCSAALKGPVTLRRQFKDKKDSLCQILMENPLELFHLDSKSEVE 60
Query: 425 IDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDS 484
+ + Q P+ +EKT FLLRLGYVENS+E+ +ALK FRGRGDQLQERFDC VQAGLD
Sbjct: 61 SSKMLSSQGPTNKLEKTAFLLRLGYVENSDEMARALKMFRGRGDQLQERFDCPVQAGLDC 120
Query: 485 NVVRNIVKRAPMVLNQSKD 503
NVV + +K+APMVLNQ+KD
Sbjct: 121 NVVSSFIKQAPMVLNQTKD 139
>gi|242045678|ref|XP_002460710.1| hypothetical protein SORBIDRAFT_02g033550 [Sorghum bicolor]
gi|241924087|gb|EER97231.1| hypothetical protein SORBIDRAFT_02g033550 [Sorghum bicolor]
Length = 576
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 157/573 (27%), Positives = 260/573 (45%), Gaps = 53/573 (9%)
Query: 45 IPVRVRSFCSSRLTHQPKVSLAESTQPPASLVASRVSRLARTEAQEVLFDYLHSTRSLGY 104
+P+R+R R +LA P + R+ +A A+ V+ +YLHSTR L
Sbjct: 1 MPLRLRVALQLRRFSSTDAALA---PPKLRNLPYRLRHVAVPAARAVISEYLHSTRCLAS 57
Query: 105 MDAEHISKNSPDFVLNLLSKIDS------GKDVTRSLMRFLRYNPINEFEPFFESLGLSQ 158
A+ I+ +SP +L+ L+ + + ++ L R L ++P+NE F ES+G
Sbjct: 58 SHADSIAAHSPRSLLSFLAALPTVPRSLPTSELPAHLRRHLNFHPLNELPFFLESIG-GP 116
Query: 159 SELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLW 218
+ +P L + MFLSD LL L +G P S++G ++ D +++++L
Sbjct: 117 TAAAPCL--NSMFLSDHPSLLGAVAALAHFGFPWSRLGLLFPSVLLDVPPD--LISARLS 172
Query: 219 AYENL--GLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSY 276
A E L + +I PSLL G + VL K FK W P S
Sbjct: 173 ALEARLHRLPRAAIIAACLTFPSLLEGDLSD--YDVLIKDIAATFKGLW-----PDLSSS 225
Query: 277 N----WDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMN 332
N + V + Y G + L + + E +++ F +LG++
Sbjct: 226 NDIDAFSGVCRRMRMFYDAGAEIGSIGGLVGGSQWVFLELGEKRIAERFWFFKELGMEGK 285
Query: 333 EVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKG-PKT 391
E+ N +I F ++ +L +G+ +I V H ++G L+ P+
Sbjct: 286 EMGRFLLSNARIFDLDFSDVVISVPRYLRRVGLAEDEIDAAVEKHPYVVGKNQLENLPRV 345
Query: 392 V---------CSKLKVGRESLCQ-----IIKDDP----LKLFHLASKTEVKIDEQVDCQN 433
+ K+ G ESL +++DD ++ L +V ++ + +
Sbjct: 346 LRAMELEHRFLEKILAGGESLRYLSPEFVLEDDSYDADVERAFLDGMAKVMLERKAHFVD 405
Query: 434 PSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKR 493
+K EFL +GY EN E TK + D L ERFD L++ G++ ++ I++
Sbjct: 406 -----KKLEFLKSVGYGEN-EITTKVIPALNSTRDLLLERFDYLLERGVEYKILCRILRV 459
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGV 552
P VLNQSKD+L +K++YL L Y LE + FPA+LC+D+ R R M WL+E G+
Sbjct: 460 FPKVLNQSKDMLNEKLNYLTEELGYSLEYLHCFPAFLCFDLENRTKPRYTMLWWLQEHGL 519
Query: 553 AKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
+ L+ +T+LA S+ +F VHP P +W
Sbjct: 520 LRKKLAPATVLANSEKRFISTLYLVHPAVPKLW 552
>gi|224134348|ref|XP_002321797.1| predicted protein [Populus trichocarpa]
gi|222868793|gb|EEF05924.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 104/142 (73%), Gaps = 5/142 (3%)
Query: 432 QNPSKDV-----EKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNV 486
+NP + + EKT FLLR +VENS+E+T+ LK FRGRG+QLQER CLVQ GLD NV
Sbjct: 2 KNPDRGLSATVLEKTAFLLREEHVENSDEMTRFLKTFRGRGNQLQERMGCLVQTGLDYNV 61
Query: 487 VRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVW 546
V + +K+ PMV NQ+KD LEKKID + N+L Y + S+ FPAYLCYD R+ R +MY+
Sbjct: 62 VSSFIKQVPMVPNQTKDALEKKIDCMTNFLGYSVNSLEEFPAYLCYDFERVKLRFRMYIR 121
Query: 547 LRERGVAKPTLSLSTILACSDA 568
LRE+G AKP +S+ TILACS A
Sbjct: 122 LREKGAAKPKVSMGTILACSCA 143
>gi|357122803|ref|XP_003563104.1| PREDICTED: uncharacterized protein LOC100821081 [Brachypodium
distachyon]
Length = 571
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 247/548 (45%), Gaps = 43/548 (7%)
Query: 66 AESTQPPA-SLVASRVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSK 124
+E + PP + R+ R A A+ + DYL STR L A+ I+ SP +L L+
Sbjct: 14 SEPSGPPKLRNLPYRLRRAAVPAARTAVSDYLISTRCLPSSHADSIAALSPRSLLTFLAG 73
Query: 125 IDS------GKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVL 178
I + D+ L R L ++P+NE F ES+GL S S LMFL+D L
Sbjct: 74 IPAVPSTFPSSDLPSLLRRHLSFHPLNELPFFLESIGLPPSADS-----ELMFLNDHPSL 128
Query: 179 LDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENL--GLSKNTVIKLVSC 236
L L +G P S++G ++ + + + +++++L E L + +I
Sbjct: 129 LPAVAALAHFGFPWSRLGLLFPDV--LLQVPPDLISARLVVLEERLRPLVRAAIIAACLA 186
Query: 237 CPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYN----WDQVSETLDFLYKIG 292
PSL +++ F +++L + L G+ N + V + Y G
Sbjct: 187 FPSL----IENDFCSCAPLVEDLIMAFGGLASDL---GAINDIDVFFGVCRRMQMFYDAG 239
Query: 293 YNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKN 352
+ + L N + E +++ KLGL +E NP + F
Sbjct: 240 MSTGSIGGLVGCNQRVFLELKEEQIGERLKFFKKLGLAGDEAGKFLLLNPGVFDLDFYDV 299
Query: 353 LLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVC----------SKLKVGRES 402
++ +L ++G+ ++ V H ++G L+ V K+ G E+
Sbjct: 300 VISVPEYLRKVGLAEDEVDAAVKKHPYVVGRNRLENLPGVLRAMGLNHRFLEKISGGGEN 359
Query: 403 LCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVE----KTEFLLRLGYVENSEEVTK 458
L + D L+ + E +++D K+ + K EFL +GY EN + TK
Sbjct: 360 LRYLSSDFVLEDSRYDMEVERAFLDRIDKVKEDKNAQHIDSKLEFLKSIGYGEN-KIATK 418
Query: 459 ALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCY 518
L + LQERFD L++ G++ ++ IV P VLNQ K++L +K++Y+ L Y
Sbjct: 419 VLPVLHSTQELLQERFDYLLERGVEYEMLCRIVSVFPKVLNQRKEMLNEKLNYMTGELGY 478
Query: 519 PLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDV 577
LE + FPA LC+D+ R+ R M WL+E G+ K L+ +T+LA S+ +F +V
Sbjct: 479 SLEYLDCFPALLCFDLENRVKPRYAMLRWLQEYGLLKRPLAPATVLANSEKRFISNLYNV 538
Query: 578 HPEGPAMW 585
HP P +W
Sbjct: 539 HPAAPKLW 546
>gi|125599923|gb|EAZ39499.1| hypothetical protein OsJ_23934 [Oryza sativa Japonica Group]
Length = 539
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/482 (29%), Positives = 225/482 (46%), Gaps = 55/482 (11%)
Query: 135 LMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSK 194
L R L ++P+NE F ES+GL + S LMFL+D LL L +G P S+
Sbjct: 57 LRRHLAFHPLNELPFFLESIGLPPTTRS-----DLMFLADHPSLLPAVAALAHFGFPWSR 111
Query: 195 MGKMYVEATEIFRHDRGVLASKLWAYEN-LG-LSKNTVIKLVSCCPSLLIGGVDS--RFV 250
+G ++ T + R ++ S+L + E LG L + +I PSLL + S R V
Sbjct: 112 LGLLF--PTVLLRLPPDLITSRLASLEACLGPLPRAAIIAACLAFPSLLENDLSSSDRLV 169
Query: 251 KVLEKLKELGFKNDWIGRYLPGKGSYN----WDQVSETLDFLYKIGYNEVQLLNLFKTNP 306
L K+ GR PG G+ N + V Y G + +L N
Sbjct: 170 DDLGKV---------FGRLGPGLGTSNDIDAFLGVCRRTWMFYDAGSEVGGIGDLVGCNN 220
Query: 307 ALVF-EGSGQKVYVLFGRLLK----LGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLI 361
VF E +++ G++LK LG+ EV NP + +F ++ +L
Sbjct: 221 QRVFLELEEERI----GKMLKFFKGLGMAGEEVGRFLLTNPMVFYLEFGDVVISVPEYLR 276
Query: 362 EIGMGMKDISNMVLMHAELMGSCSLKGPKTVC----------SKLKVGRESLCQIIKDDP 411
+G+ + +++ V H ++G L+ V K+ G ESL + D
Sbjct: 277 RVGLAVNEVNAAVEKHPYVVGKNLLQNLPGVLRAMELDHWFLEKISDGGESLRYLFPDFV 336
Query: 412 LKLFHLASKTEVK-------IDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFR 464
L+ ++ E++ I + D + D K EFL +GY EN + TK +
Sbjct: 337 LE--DVSYDVEIERAFLGGMIKMKADKRAQHID-GKLEFLKSIGYGEN-KIATKIIAVLH 392
Query: 465 GRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVV 524
D LQERFDCL++ GL+ ++ IV P +LNQ K +L K++Y+ L Y +E +
Sbjct: 393 SNRDTLQERFDCLLERGLEYKMLCQIVSVFPKILNQGKKMLNDKLNYMTKELGYSVEYLE 452
Query: 525 AFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPA 583
FPA+LC+D+ R+ R M WLRE G+ + TL+ +T+LA S+ +F +VHP P
Sbjct: 453 LFPAFLCFDLENRVKPRYTMLRWLRENGLLRRTLAPATVLANSEKRFISNLYNVHPAAPK 512
Query: 584 MW 585
+W
Sbjct: 513 LW 514
>gi|326503326|dbj|BAJ99288.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 571
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 237/534 (44%), Gaps = 42/534 (7%)
Query: 79 RVSRLARTEAQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDS------GKDVT 132
R+ R A A+ + DYL STR L A+ I+ +P + L+ I + D+
Sbjct: 28 RLRRAAVPAARTAISDYLISTRCLPSSHADSITALAPCSLHTFLAGIPAVPSTLPSSDLP 87
Query: 133 RSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPR 192
L R L Y+P+NE F ES+GL S S LMFL+D LL L +G P
Sbjct: 88 SLLRRHLSYHPLNELPFFLESIGLPPSTDS-----ELMFLTDHPTLLPAVAALAHFGFPW 142
Query: 193 SKMGKMYVEATEIFRHDRGVLASKLWAYEN--LGLSKNTVIKLVSCCPSLLIGGVDSRFV 250
+G ++ + + + +++++L A E L + +I PSL+ V S
Sbjct: 143 PDLGLLF--PSVLLQVPPDLISARLVALEESLRPLPRAAIIAACLVSPSLIENDVPSS-A 199
Query: 251 KVLEKLKELGFKNDWIGRYLPGKGSYN----WDQVSETLDFLYKIGYNEVQLLNLFKTNP 306
+++ L+ G + P G+ N + +V + Y+ G + L N
Sbjct: 200 PLVDDLRR------AYGGFGPDLGASNDIDVFLRVCRRMQMFYEAGLKIGSIGGLVGCNQ 253
Query: 307 ALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMG 366
+ E +++ +LGL E NP + F ++ +L +G+
Sbjct: 254 RVFLELKEERIGERLKFFKRLGLAGEEAGRFLLSNPGVFDLDFDDVMISVPEYLRRVGLA 313
Query: 367 MKDISNMVLMHAELMGSCSLKGPKTVC----------SKLKVGRESLCQIIKDDPLKLFH 416
++ V H ++G L+ V K+ G ESL + D L+
Sbjct: 314 DDEVDVAVKKHPYVVGRNRLENLPGVLLAMGLNHRFLEKISGGGESLLYLSPDFVLEDVS 373
Query: 417 LASKTEVKIDE---QVDCQNPSKDVE-KTEFLLRLGYVENSEEVTKALKQFRGRGDQLQE 472
+ E + +V + ++ V+ K EFL +GY EN + T L + L E
Sbjct: 374 YDREVERAFSDRMVKVKAEKSAQHVDTKLEFLKSIGYGEN-KIATHILPFLHSTREMLNE 432
Query: 473 RFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCY 532
RFD L++ G++ ++ +V P VLNQ K++L +K++Y+ L Y LE + FPA LC+
Sbjct: 433 RFDYLLERGVEYKMLCRMVSVFPKVLNQGKEMLNEKLNYMTLDLGYSLEYLDCFPALLCF 492
Query: 533 DM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
D+ R+ R M WL+ G+ K L+ +T+LA S+ +F +VHP P +W
Sbjct: 493 DLENRVKPRYAMLRWLQSYGLLKRPLAPATVLANSEKRFISNLYNVHPAAPKLW 546
>gi|226528557|ref|NP_001147866.1| mTERF family protein [Zea mays]
gi|195614222|gb|ACG28941.1| mTERF family protein [Zea mays]
gi|414886713|tpg|DAA62727.1| TPA: mTERF family protein [Zea mays]
Length = 574
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 240/530 (45%), Gaps = 62/530 (11%)
Query: 94 DYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDS------GKDVTRSLMRFLRYNPINEF 147
+YLHSTR L A+ I+ +SP + + L+ + + + L R L ++P+NE
Sbjct: 45 EYLHSTRCLPSSHADSIATHSPRSLFSFLAALPTVPCSLPTAEFPALLRRHLNFHPLNEL 104
Query: 148 EPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFR 207
F ES+G + P + +FLSD LL L +G P S++G +Y
Sbjct: 105 PFFLESIG-GPTAAPPCF--NSIFLSDHPSLLGAVAALAHFGFPWSRLGLLYPGVLLDMP 161
Query: 208 HDRGVLASKLWAYENL--GLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDW 265
D +++++L E GL + +I PSLL G + + + K++
Sbjct: 162 PD--LISTRLSVLEARLHGLPRAAIIAACLTFPSLLEGDLSDYDLLI----KDIATTFIG 215
Query: 266 IGRYLPGKGSYN-WDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFG-- 322
+G L + + V + Y G F + LV G Q+V++ G
Sbjct: 216 LGPDLRASNDIDAFSAVCRRMRMFYDAGTE-------FGSIGGLV--GGSQRVFLELGEK 266
Query: 323 ----RLL---KLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
RL +LG++ E+ N +I F ++ +L+ +G+ ++ V
Sbjct: 267 RIAERLWFFKELGMEGKEMGRFLLSNARIFDLDFSDVVISVPRYLLNVGLAEDEVDAAVG 326
Query: 376 MHAELMGSCSLKGPKTVC----------SKLKVGRESLCQ-----IIKDDP----LKLFH 416
H ++G L+ V K+ G ESL +++DD ++
Sbjct: 327 KHPYVVGKNQLENLARVLRAMELEHRFLEKILAGGESLRYLSPEFVLEDDSYDAEVERAF 386
Query: 417 LASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDC 476
L +V +D + + +K EFL +GY EN E TK + D L ERFD
Sbjct: 387 LDGMAKVMVDRKAQFVD-----KKLEFLKSVGYGEN-EITTKVIPVINSTKDLLLERFDY 440
Query: 477 LVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-G 535
L++ G++ ++ I++ P VLNQSKD+L +K++YL L Y LE + FPA+LC+D+
Sbjct: 441 LLERGVEYKILCRILRVFPKVLNQSKDMLNEKLNYLTEELGYSLEYLGCFPAFLCFDLEN 500
Query: 536 RINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMW 585
R+ R M WL+E G+ + L+ +T+LA S+ +F VHP P +W
Sbjct: 501 RVKPRYTMLWWLQEHGLLRKKLAPATVLANSEKRFISTLYLVHPAVPKLW 550
>gi|297734588|emb|CBI16639.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 7/178 (3%)
Query: 88 AQEVLFDYLHSTRSLGYMDAEHISKNSPDFVLNLLSKID-SGKDVTRSLMRFLRYNPINE 146
AQ+ L DY HSTRSL ++ AEHI +NS + + +SK++ S +S RFLRY+PINE
Sbjct: 44 AQKALTDYFHSTRSLPFLYAEHIGRNSFYSLYDPISKVEFSLSSFAKSFERFLRYHPINE 103
Query: 147 FEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIF 206
FE FFES+G++Q E+S LP + F ++D +L+ L +G P +K+G +Y IF
Sbjct: 104 FEFFFESIGITQKEISGFLPPNKFFFAEDGRILNAAGALSGFGFPWNKLGILYKAEASIF 163
Query: 207 RHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRF-----VKVLEKLKEL 259
D L+ +L +++ GLS +VI + P ++GG D+ F +++ +L +L
Sbjct: 164 DKDSDDLSRRLCRFKDYGLSNVSVIGICLAFP-FVLGGKDNLFQNHFIFEIITRLSDL 220
>gi|414590279|tpg|DAA40850.1| TPA: hypothetical protein ZEAMMB73_302563, partial [Zea mays]
Length = 118
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Query: 456 VTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNY 515
TK + + L ERF+ L++ G++ ++ I++ P VLNQS+ +L +K++YL
Sbjct: 2 TTKVIPALNSTKELLLERFNYLLKRGVEYRILCRILRLFPKVLNQSEGMLNEKLNYLTEE 61
Query: 516 LCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
L Y LE + FPA+LC+D+ R+ R M WL+E G+ K +T+LA S+ +F
Sbjct: 62 LGYSLEYLDRFPAFLCFDLENRVKPRYTMLRWLQEHGLLKKNYP-ATVLANSENRF 116
>gi|302773233|ref|XP_002970034.1| hypothetical protein SELMODRAFT_92242 [Selaginella moellendorffii]
gi|300162545|gb|EFJ29158.1| hypothetical protein SELMODRAFT_92242 [Selaginella moellendorffii]
Length = 514
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 150/364 (41%), Gaps = 43/364 (11%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
LE L +G + I RY + +D+L K+G+ +L L P +++
Sbjct: 99 LEFLASIGLEKAHILRYPVVLTCSVKRNMVPVIDYLDKLGFTPEELPALLTQFPMILYSS 158
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
+ + LL G+ + + + + P +L K + +V +L+ IG+ + I
Sbjct: 159 IAIDLTPIVDYLLGYGISLENIPKVLLRYPDVLGFKREGTMSTSVAYLVSIGVNSRQIGP 218
Query: 373 MVLMHAELMG---SCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQV 429
M+ EL+G ++K L +E + ++++ P + L E + +V
Sbjct: 219 MLTRFPELLGMRVGNNIKRKVDFYRGLGFTKEEIARLLEKHP---YVLGFDLEENVKPKV 275
Query: 430 DC--QNPSKDVEKTEFLLRLGYV-------ENSEEVTKALKQFRGRGDQLQERFDCLVQ- 479
+C Q ++ E F+ R V E +E+ + R + F+ L Q
Sbjct: 276 ECLLQAGIQEKELPSFIARFPDVFELDLRAELAEKTAWLTNEIFLRPSDVPRVFERLPQM 335
Query: 480 -----------------AGLDSNVVRNIVKRAPMVLN-QSKDVLEKKIDYLKNYLCYPLE 521
AG+ + + +V P +L + ++ L+ + + + + PL
Sbjct: 336 LVINEKMAGEKVKFLQGAGISAGDIAKMVVDCPQILAVKLEETLKPNLAFFQQKMRKPLS 395
Query: 522 SVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK----YFVDV 577
++AFP YL YD+ R R K + ER K SL+ LACSD KF++ F++
Sbjct: 396 ELLAFPVYLTYDLAR---RIKPRYRMVER--KKINCSLAWFLACSDDKFKRRMSVQFMEA 450
Query: 578 HPEG 581
P+
Sbjct: 451 PPQA 454
>gi|302806982|ref|XP_002985222.1| hypothetical protein SELMODRAFT_121675 [Selaginella moellendorffii]
gi|300147050|gb|EFJ13716.1| hypothetical protein SELMODRAFT_121675 [Selaginella moellendorffii]
Length = 514
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 153/361 (42%), Gaps = 37/361 (10%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
LE L +G + I RY + +D+L K+G+ +L L P +++
Sbjct: 99 LEFLASIGLEKAHILRYPVVLTCSVKRNMVPVIDYLDKLGFTPEELPALLTQFPMILYSS 158
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
+ + LL G+ + + + + P +L K + +V +L+ IG+ + I
Sbjct: 159 IAIDLTPIVDYLLGYGISLENIPKVLLRYPDVLGFKREGTMSTSVAYLVSIGVNTRQIGP 218
Query: 373 MVLMHAELMG---SCSLKGPKTVCSKLKVGRESLCQIIKDDPLKL-FHLASKTEVKID-- 426
M+ EL+G ++K L +E + ++++ P L F L + K++
Sbjct: 219 MLTRFPELLGMRVGNNIKRKVDFYRGLGFTKEEIARLLEKHPYVLGFDLEENVKAKVECL 278
Query: 427 EQVDCQN---PS---------------KDVEKTEFLLRLGYVENSE--EVTKALKQFRGR 466
Q Q PS K EKT +L ++ S+ V + L Q
Sbjct: 279 LQAGIQEKELPSFIARFPDVFELDLRAKLAEKTAWLTNEIFLRPSDVPRVFERLPQMLVI 338
Query: 467 GDQLQ-ERFDCLVQAGLDSNVVRNIVKRAPMVLN-QSKDVLEKKIDYLKNYLCYPLESVV 524
+++ E+ L G+ + + +V P +L + ++ L+ + + + + PL ++
Sbjct: 339 NEKMAGEKVKFLQGTGISAGDIAKMVVDCPQILAVKLEETLKPNLAFFQQKMRKPLSELL 398
Query: 525 AFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK----YFVDVHPE 580
AFP YL YD+ R R K + ER K SL+ LACSD KF++ F++ P+
Sbjct: 399 AFPVYLTYDLAR---RIKPRYRMVER--KKINCSLAWFLACSDDKFKRRMSVQFMEAPPQ 453
Query: 581 G 581
Sbjct: 454 A 454
>gi|255567636|ref|XP_002524797.1| conserved hypothetical protein [Ricinus communis]
gi|223535981|gb|EEF37640.1| conserved hypothetical protein [Ricinus communis]
Length = 524
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 143/346 (41%), Gaps = 36/346 (10%)
Query: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315
L +LG + I Y G + LD+L K+G + + P ++
Sbjct: 143 LHQLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSSFTEFLRRYPQVLHASVVV 202
Query: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
+ + L + +K N++ + + P+++ K + +V +L+ IG+ ++I ++
Sbjct: 203 DLAPVVKYLQGMDIKPNDIPRVLEKYPEVMGFKLEGTMSTSVAYLVGIGVARREIGGILT 262
Query: 376 MHAELMG---SCSLKGPKTVCSKLKVGRESLCQIIKDDPLKL-FHLASKTEVKIDE---- 427
+ E++G +K L + R ++ ++I+ P L F L + ++
Sbjct: 263 RYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIEKRPYILGFELQERVIPNVETLLKF 322
Query: 428 --------QVDCQNP---SKDVEKTEF--------LLRLGYVENSEEVTKALKQFRGRGD 468
V Q P D+E ++ LG E + V K +
Sbjct: 323 NVSKATLPSVVAQYPEIIGLDLEPKLLRQQSLLHSVIELGPEEFARVVEKMPQVISLSRI 382
Query: 469 QLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPA 528
+ + D L + G VR +V R P VL + D+++ DY K + PL+ +V FPA
Sbjct: 383 PIVKHVDFLKECGFSMQQVREMVVRCPHVLALNIDIMKLCFDYFKMEMKRPLDDLVIFPA 442
Query: 529 YLCYDMGRINHRCKMYVWLRERGVAKPTL--SLSTILACSDAKFEK 572
+ Y + + + R + VAK L SLS +L CSD KFE+
Sbjct: 443 FFTYGL-------ESTIKPRHKIVAKKELKCSLSWLLNCSDDKFEQ 481
>gi|356500833|ref|XP_003519235.1| PREDICTED: uncharacterized protein LOC100785223 [Glycine max]
Length = 518
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 148/346 (42%), Gaps = 36/346 (10%)
Query: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315
L LG + I Y G + LD+L K+G + + + P ++
Sbjct: 137 LHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSSITQFLQRYPQVLHASVVV 196
Query: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
+ + L + +K ++V + + P++L K + +V +LI IG+G ++I ++
Sbjct: 197 DLMPVVNYLKGMDIKFDDVPRVLERYPEVLGFKLEGTMSTSVAYLIGIGVGRREIGGVLT 256
Query: 376 MHAELMG---SCSLKGPKTVCSKLKVGRESLCQIIKDDPLKL-FHLASKTE--VKIDEQV 429
+ E++G +K L + R ++ ++I+ P L F L K + VK E+
Sbjct: 257 RYPEILGMRVGRVIKPFVEYLESLGIPRLAIARLIEQRPYILGFGLGEKVKPNVKYLEEY 316
Query: 430 DCQNPS-----------------KDVEKTEFLLRLGYVENSEEVTKALKQFR-----GRG 467
+ + S + +EK LL + E+ + +++ G
Sbjct: 317 NVRRTSLPSIIAQYPDIIGTDLNQKLEKQRSLLNSVLDLDPEDFGRVVEKMPQVVNLSSG 376
Query: 468 DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFP 527
L+ D L G +R +V P +L + D+++ DY + + PLE +V FP
Sbjct: 377 PMLKH-VDFLKNCGFSLPQMRQMVVGCPQLLALNIDIMKLSFDYFQMVMKRPLEDLVTFP 435
Query: 528 AYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
A+ Y + I R KM V ++G+ SLS +L CS+ KFE+
Sbjct: 436 AFFTYGLESTIKPRHKMVV---KKGLK---CSLSWMLNCSNEKFEQ 475
>gi|226503783|ref|NP_001149660.1| mTERF family protein [Zea mays]
gi|195629252|gb|ACG36267.1| mTERF family protein [Zea mays]
gi|413949340|gb|AFW81989.1| putative mitochondrial transcription termination factor family
protein [Zea mays]
Length = 494
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 148/350 (42%), Gaps = 40/350 (11%)
Query: 254 EKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGS 313
E L LG + + Y G + LD+L K+G L +L + P ++
Sbjct: 108 EFLGSLGLTQEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRRDALPDLLRRYPQVLHASV 167
Query: 314 GQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNM 373
+ + L + ++ +V + + P++L K + +V +L+ IG+G + + ++
Sbjct: 168 VVDLAPVVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSV 227
Query: 374 VLMHAELMGSCSLKGPKTVCSKLK---VGRESLCQIIKDDPLKL-FHLASKTEVKIDEQV 429
+ E++G K K L+ + R ++ +II+ P L F L K + I+ V
Sbjct: 228 ITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALV 287
Query: 430 DC------------QNPSKDVEKTEF---------LLRLGYVENSEEVTKALKQFR---- 464
D Q P DV E L + + E+ + L++
Sbjct: 288 DIGVRKEALASIVMQYP--DVLGLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAIS 345
Query: 465 -GRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESV 523
GR L+ + L G + V +V P +L + D++ +Y KN + LE +
Sbjct: 346 LGRAAVLKH-VNFLTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEEL 404
Query: 524 VAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
V FPA+ Y + + R +M + +G+ T SL+ +L CSDAKF++
Sbjct: 405 VEFPAFFTYGIESTVRPRHEM---VSRKGL---TCSLAWLLNCSDAKFDE 448
>gi|326522817|dbj|BAJ88454.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 149/352 (42%), Gaps = 42/352 (11%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L+ LG D + Y G + LD+L KIG +L +L + P ++
Sbjct: 111 VEFLRSLGLGPDDLAAYPLALGCSVRKNMVPVLDYLGKIGVRRDELPHLLRRYPQVLHAS 170
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
+ + L + +K +V + + P++L K + +V +L+ IG+ + I
Sbjct: 171 IVVDLAPVVKYLQGMDVKPGDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVARRQIGG 230
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLK---VGRESLCQIIKDDPLKL-FHLASKTEVKIDEQ 428
++ E++G K K L+ + R ++ ++I+ P L F L + + I+
Sbjct: 231 VITRFPEVLGMRVGKIIKPFVEHLQGIGLQRLAVARMIEKKPYVLGFGLEERVKPNIEAL 290
Query: 429 VDC-----QNPSKDVEKTEFL---LRLGYVENS------------------EEVTKALKQ 462
++ PS ++ + L LR VE E + +A+
Sbjct: 291 LEFGVRKEALPSIVIQYPDVLGVELRDKLVEQQSLFESSILVSGDDFGRVVERMPQAISL 350
Query: 463 FRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLES 522
GR L+ + L G + V +V P +L + D+++ +Y KN + LE
Sbjct: 351 --GRAAVLKH-VNFLTGCGFLLSQVSKMVVGCPQLLALNMDIMKMNFEYFKNEMERDLEE 407
Query: 523 VVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP--TLSLSTILACSDAKFEK 572
+V FPA+ Y + + + R VAK T SL+ +L CSDAKF++
Sbjct: 408 LVEFPAFFTYGL-------ESTIRYRHEIVAKKGFTCSLAWLLNCSDAKFDE 452
>gi|326513968|dbj|BAJ92134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 149/352 (42%), Gaps = 42/352 (11%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L+ LG D + Y G + LD+L KIG +L +L + P ++
Sbjct: 111 VEFLRSLGLGPDDLAAYPLALGCSVRKNMVPVLDYLGKIGVRRDELPHLLRRYPQVLHAS 170
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
+ + L + +K +V + + P++L K + +V +L+ IG+ + I
Sbjct: 171 IVVDLAPVVKYLQGMDVKPGDVPRVLERYPELLGFKLEGTVSTSVAYLVGIGVARRQIGG 230
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLK---VGRESLCQIIKDDPLKL-FHLASKTEVKIDEQ 428
++ E++G K K L+ + R ++ ++I+ P L F L + + I+
Sbjct: 231 VITRFPEVLGMRVGKIIKPFVEHLQGIGLQRLAVARMIEKKPYVLGFGLEERVKPNIEAL 290
Query: 429 VDC-----QNPSKDVEKTEFL---LRLGYVENS------------------EEVTKALKQ 462
++ PS ++ + L LR VE E + +A+
Sbjct: 291 LEFGVRKEALPSIVIQYPDVLGVELRDKLVEQQSLFESSILVSGDDFGRVVERMPQAISL 350
Query: 463 FRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLES 522
GR L+ + L G + V +V P +L + D+++ +Y KN + LE
Sbjct: 351 --GRAAVLKH-VNFLTGCGFLLSQVSKMVVGCPQLLALNMDIMKMNFEYFKNEMERDLEE 407
Query: 523 VVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP--TLSLSTILACSDAKFEK 572
+V FPA+ Y + + + R VAK T SL+ +L CSDAKF++
Sbjct: 408 LVEFPAFFTYGL-------ESTIRYRHEIVAKKGFTCSLAWLLNCSDAKFDE 452
>gi|326523403|dbj|BAJ88742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 149/352 (42%), Gaps = 42/352 (11%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L+ LG D + Y G + LD+L KIG +L +L + P ++
Sbjct: 102 VEFLRSLGLGPDDLAAYPLALGCSVRKNMVPVLDYLGKIGVRRDELPHLLRRYPQVLHAS 161
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
+ + L + +K +V + + P++L K + +V +L+ IG+ + I
Sbjct: 162 IVVDLAPVVKYLQGMDVKPGDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVARRQIGG 221
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLK---VGRESLCQIIKDDPLKL-FHLASKTEVKIDEQ 428
++ E++G K K L+ + R ++ ++I+ P L F L + + I+
Sbjct: 222 VITRFPEVLGMRVGKIIKPFVEHLQGIGLQRLAVARMIEKKPYVLGFGLEERVKPNIEAL 281
Query: 429 VDCQN-----PSKDVEKTEFL---LRLGYVENS------------------EEVTKALKQ 462
++ PS ++ + L LR VE E + +A+
Sbjct: 282 LEFGVRKEALPSIVIQYPDVLGVELRDKLVEQQSLFESSILVSGDDFGRVVERMPQAISL 341
Query: 463 FRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLES 522
GR L+ + L G + V +V P +L + D+++ +Y KN + LE
Sbjct: 342 --GRAAVLKH-VNFLTGCGFLLSQVSKMVVGCPQLLALNMDIMKMNFEYFKNEMERDLEE 398
Query: 523 VVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP--TLSLSTILACSDAKFEK 572
+V FPA+ Y + + + R VAK T SL+ +L CSDAKF++
Sbjct: 399 LVEFPAFFTYGL-------ESTIRYRHEIVAKKGFTCSLAWLLNCSDAKFDE 443
>gi|357490431|ref|XP_003615503.1| mTERF family protein [Medicago truncatula]
gi|355516838|gb|AES98461.1| mTERF family protein [Medicago truncatula]
Length = 530
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 176/417 (42%), Gaps = 53/417 (12%)
Query: 201 EATEIFRHDRGVLASKLWA-YENLGLS-----KNTVIKLV-------SCCPSLLIGGVDS 247
++ EI R RG AS L+A Y LS K T+ K+V P L G
Sbjct: 76 DSGEIQRKRRG--ASSLYAGYARPSLSEMKKDKATLRKVVYEFLRGIGIVPDELDGLELP 133
Query: 248 RFVKVLEK----LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFK 303
V V+++ L LG + I Y G + LD+L K+G + + +
Sbjct: 134 VTVDVMKERVDFLHSLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTITQFLR 193
Query: 304 TNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEI 363
T P ++ + + L + +K +++ + + P++L K + +V +LI I
Sbjct: 194 TYPQVLHASVVVDLVPVVKYLQGMDIKPDDIPRVLERYPEVLGFKLEGTMSTSVAYLIGI 253
Query: 364 GMGMKDISNMVLMHAELMG---SCSLKGPKTVCSKLKVGRESLCQIIKDDPLKL-FHLAS 419
G+G +++ ++ E++G +K L + R ++ ++I+ P L F L
Sbjct: 254 GVGRRELGGILTRFPEILGMRVGRVIKPFVEYLESLGIPRLAIARLIETQPYILGFDLDE 313
Query: 420 KTE--VKIDEQVDCQNPS--------KDVEKTEFLLRLGY------------VENSEEVT 457
K + VK E+ + + S D+ T+ +L E+ +
Sbjct: 314 KVKPNVKSLEEFNVRETSLASIIAQYPDIIGTDLEPKLADKRSVLNSVLDLDAEDFGLII 373
Query: 458 KALKQFRG-RGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYL 516
+ + Q + + D L G + +R ++ P +L + D+++ DY ++ +
Sbjct: 374 EKMPQVVSLSSTPMLKHVDFLKDCGFSVDQMRKMIVGCPQLLALNIDIMKLSFDYFQSEM 433
Query: 517 CYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
PLE +V FPA+ Y + I R M + ++G+ SL+ +L CSD KFE+
Sbjct: 434 ERPLEDLVEFPAFFTYGLESTIKPRHNM---VTKKGLK---CSLAWMLNCSDEKFEQ 484
>gi|296086681|emb|CBI32316.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 143/352 (40%), Gaps = 48/352 (13%)
Query: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315
L +LG + I Y G + LD+L K+G + + P ++
Sbjct: 138 LHKLGLSIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHASVVV 197
Query: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
+ + L + +K N++ + + P++L K + +V +L+ IG+ ++I ++
Sbjct: 198 DLAPVVKNLQGMDIKPNDIPRVLEKYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLT 257
Query: 376 MHAELMG---SCSLKGPKTVCSKLKVGRESLCQIIKDDPLKL-FHLASKTEVKIDEQVDC 431
+ E++G +K L + R ++ ++I+ P L F L + + + ++
Sbjct: 258 RYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEERVKANVKSLLEF 317
Query: 432 QNPSKDVEKTEFL----------------------------LRLGYVENSEEVTKALKQF 463
DV KT L LG E+ V + + Q
Sbjct: 318 -----DVRKTSLASMIAQYPEIIGIDLEPKLLSQRSLLNSALDLG-PEDFPIVVEKMPQV 371
Query: 464 RGRGDQ-LQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLES 522
G + + D L G VR +V P +L + D+++ D+ + + PL+
Sbjct: 372 VSLGKTPMLKHVDFLKDCGFSLQQVRKMVVGCPQLLALNLDIMKFSFDFFQKEMERPLDD 431
Query: 523 VVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTL--SLSTILACSDAKFEK 572
+VAFPA+ Y + + + R + VAK L SLS +L CSD KFE+
Sbjct: 432 LVAFPAFFTYGL-------ESTIRPRHQMVAKKGLKCSLSWLLICSDEKFEE 476
>gi|242087873|ref|XP_002439769.1| hypothetical protein SORBIDRAFT_09g019800 [Sorghum bicolor]
gi|241945054|gb|EES18199.1| hypothetical protein SORBIDRAFT_09g019800 [Sorghum bicolor]
Length = 498
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 148/350 (42%), Gaps = 40/350 (11%)
Query: 254 EKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGS 313
E L LG + + Y G + LD+L K+G L +L + P ++
Sbjct: 112 EFLGSLGLTREDLAAYPLALGCSVRKNMVPVLDYLGKLGVRRDALPDLLRRYPQVLHASV 171
Query: 314 GQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNM 373
+ + L + ++ +V + + P++L K + +V +L+ IG+G + I ++
Sbjct: 172 VVDLAPVVKYLQGMDVRPADVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQIGSV 231
Query: 374 VLMHAELMGSCSLKGPKTVCSKLK---VGRESLCQIIKDDPLKL-FHLASK----TEVKI 425
+ E++G K K L+ + R ++ +II+ P L F L K TE +
Sbjct: 232 ITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAVARIIEKKPYVLGFGLEEKVKPNTEALM 291
Query: 426 D--------EQVDCQNPS------KD--------VEKTEFLLRLGYVENSEEVTKALKQF 463
D + Q P +D E + + R + E + +A+
Sbjct: 292 DFGVRKEALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSREDFGRVVERMPQAISLG 351
Query: 464 RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESV 523
R +Q+ + L G + V +V P +L + D++ +Y KN + LE +
Sbjct: 352 RA---AVQKHVNFLTACGFMLSQVSKMVVACPQLLALNMDIMRMNFEYFKNEMERDLEEL 408
Query: 524 VAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
V FPA+ Y + + R +M + ++G T SL+ +L CSDAKF++
Sbjct: 409 VEFPAFFTYGLESTVRPRHEM---VSQKGF---TCSLAWLLNCSDAKFDE 452
>gi|225436880|ref|XP_002273388.1| PREDICTED: uncharacterized protein LOC100249461 [Vitis vinifera]
Length = 530
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 143/352 (40%), Gaps = 48/352 (13%)
Query: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315
L +LG + I Y G + LD+L K+G + + P ++
Sbjct: 145 LHKLGLSIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHASVVV 204
Query: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
+ + L + +K N++ + + P++L K + +V +L+ IG+ ++I ++
Sbjct: 205 DLAPVVKNLQGMDIKPNDIPRVLEKYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLT 264
Query: 376 MHAELMG---SCSLKGPKTVCSKLKVGRESLCQIIKDDPLKL-FHLASKTEVKIDEQVDC 431
+ E++G +K L + R ++ ++I+ P L F L + + + ++
Sbjct: 265 RYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEERVKANVKSLLEF 324
Query: 432 QNPSKDVEKTEFL----------------------------LRLGYVENSEEVTKALKQF 463
DV KT L LG E+ V + + Q
Sbjct: 325 -----DVRKTSLASMIAQYPEIIGIDLEPKLLSQRSLLNSALDLG-PEDFPIVVEKMPQV 378
Query: 464 RGRGDQ-LQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLES 522
G + + D L G VR +V P +L + D+++ D+ + + PL+
Sbjct: 379 VSLGKTPMLKHVDFLKDCGFSLQQVRKMVVGCPQLLALNLDIMKFSFDFFQKEMERPLDD 438
Query: 523 VVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTL--SLSTILACSDAKFEK 572
+VAFPA+ Y + + + R + VAK L SLS +L CSD KFE+
Sbjct: 439 LVAFPAFFTYGL-------ESTIRPRHQMVAKKGLKCSLSWLLICSDEKFEE 483
>gi|302799743|ref|XP_002981630.1| hypothetical protein SELMODRAFT_179019 [Selaginella moellendorffii]
gi|300150796|gb|EFJ17445.1| hypothetical protein SELMODRAFT_179019 [Selaginella moellendorffii]
Length = 457
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 161/400 (40%), Gaps = 64/400 (16%)
Query: 179 LDNFHVLC-DYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCC 237
L N HV D G SK + + H+ +L EN GL + + + +
Sbjct: 94 LKNLHVKGRDLGAVLSKQPALLLRPFNELNHNVALL-------ENAGLKREWMGLVFTFS 146
Query: 238 PSLLIGGVDSRFVKVLEKLKELGFKNDWIG----RYLPGKGSYNWDQVSETLDFLYKIGY 293
PS+L+ D + + + ELG G + P G + +++ LD+L G
Sbjct: 147 PSVLLEDHD-QLNRRIGMFTELGIDEYSFGTMAFNFPPILGRLSIQEMAAKLDYLRGFGL 205
Query: 294 NEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNL 353
+ + N+ T P L+ + + L LG++ + + + S NP +L N+
Sbjct: 206 GDHTIGNMVVTRPHLLGASVEESWQPIVKFLYCLGVERSGIRRILSLNPSVLCLDLSINI 265
Query: 354 LQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLK 413
+ V FL IG +H E++G + P + + L + + + DD
Sbjct: 266 VPKVQFLRAIG-----------VHEEVIGQVLVGFPPLLTASLNKRIRPVVRFLLDD--- 311
Query: 414 LFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQER 473
A +E KI + + Q ++ LRL S+ V R
Sbjct: 312 ----AGVSEDKIGKVIASQ---PEIIGCSLNLRL-----SDNV----------------R 343
Query: 474 FDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYD 533
F + G+ S+ + ++ PM++ + VLE K YLK + LE V+ FP + Y
Sbjct: 344 F--FMSLGIQSHQLGQMIADFPMLVKYNPAVLEPKYLYLKRVMRRRLEEVIKFPRFFSYA 401
Query: 534 M-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
+ RI R ++ L +G+ L +LACSD +F +
Sbjct: 402 LESRIVARHEL---LERKGL---QFRLKQMLACSDEEFGR 435
>gi|302759473|ref|XP_002963159.1| hypothetical protein SELMODRAFT_165772 [Selaginella moellendorffii]
gi|300168427|gb|EFJ35030.1| hypothetical protein SELMODRAFT_165772 [Selaginella moellendorffii]
Length = 457
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 160/400 (40%), Gaps = 64/400 (16%)
Query: 179 LDNFHVLC-DYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCC 237
L N HV D G SK + + H+ +L EN GL + + + +
Sbjct: 94 LKNLHVKGRDLGAVLSKQPALLLRPFNELNHNVALL-------ENAGLKREWMGLVFTFS 146
Query: 238 PSLLIGGVDSRFVKVLEKLKELGFKNDWIG----RYLPGKGSYNWDQVSETLDFLYKIGY 293
PS+L+ D + + + ELG G + P G + +++ LD+L G
Sbjct: 147 PSVLLEDHD-QLNRRIGMFTELGIDEYSFGTMAFNFPPILGRLSIQEMAAKLDYLRGFGL 205
Query: 294 NEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNL 353
+ + N+ T P L+ + + L LG++ + + + S NP +L N+
Sbjct: 206 GDHTIGNMVVTRPHLLGASVEESWQPIVKFLYCLGIERSGIRRILSLNPSVLCLDLSINI 265
Query: 354 LQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLK 413
+ V FL IG +H E++G + P + + L + + + DD
Sbjct: 266 VPKVQFLRAIG-----------VHEEVIGQVLVGFPPLLTASLNKRIRPVVRFLLDD--- 311
Query: 414 LFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQER 473
A +E KI + + Q ++ LRL S+ V R
Sbjct: 312 ----AGVSEDKIGKVIAAQ---PEIIGCSLNLRL-----SDNV----------------R 343
Query: 474 FDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYD 533
F + G+ S+ + ++ PM++ + VLE K YLK + LE + FP + Y
Sbjct: 344 F--FMSLGIQSHQLGQMIADFPMLVKYNPAVLEPKYLYLKRVMRRRLEEAIKFPRFFSYA 401
Query: 534 M-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
+ RI R ++ L +G+ L +LACSD +F +
Sbjct: 402 LESRIVARHEL---LESKGL---QFRLKQMLACSDEEFGR 435
>gi|115463801|ref|NP_001055500.1| Os05g0404000 [Oryza sativa Japonica Group]
gi|50878442|gb|AAT85216.1| unknown protein [Oryza sativa Japonica Group]
gi|113579051|dbj|BAF17414.1| Os05g0404000 [Oryza sativa Japonica Group]
gi|215736804|dbj|BAG95733.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631544|gb|EEE63676.1| hypothetical protein OsJ_18494 [Oryza sativa Japonica Group]
Length = 508
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 149/350 (42%), Gaps = 38/350 (10%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L L N+ + Y G + LD+L K+G + L +L + P ++
Sbjct: 116 VEFLHSLDLSNEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRQDALPDLLRRYPQVLHAS 175
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
+ + L + ++ ++V + + P++L K + ++ +L+ IG+ + + +
Sbjct: 176 VVVDLAPVVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARRQVGS 235
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLK---VGRESLCQIIKDDPLKL-FHLASKTEVKIDEQ 428
++ E++G K K L+ + R ++ +II+ P L F L K + I+
Sbjct: 236 VITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEAL 295
Query: 429 VD------------CQNPS-------KDVEKTEFLLRLGYVENSEEVTKALKQFR----- 464
++ Q P + + L + +SE+ + +++
Sbjct: 296 LEFGVRKEALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAISL 355
Query: 465 GRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVV 524
GR L+ + L G + V +V P +L + D+++ +Y +N + LE +V
Sbjct: 356 GRTAVLKH-VNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELV 414
Query: 525 AFPAYLCYDMGRINHRCKMYVWLRERGVAKP--TLSLSTILACSDAKFEK 572
FPA+ Y + + V R VAK T SL+ +L CSDAKF++
Sbjct: 415 EFPAFFTYGL-------ESTVRPRHEMVAKKGFTCSLAWLLNCSDAKFDE 457
>gi|302796507|ref|XP_002980015.1| hypothetical protein SELMODRAFT_419725 [Selaginella moellendorffii]
gi|300152242|gb|EFJ18885.1| hypothetical protein SELMODRAFT_419725 [Selaginella moellendorffii]
Length = 436
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 137/306 (44%), Gaps = 26/306 (8%)
Query: 281 VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQ 340
+ E + FL + G N+ Q+ + K +PAL+ + L++ GL + + ++ S
Sbjct: 39 LEENVRFLSRHGLNDTQMADAVKKHPALLLLDVASDLEPRGKFLMEQGLSPSAIAAILSS 98
Query: 341 NPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGR 400
P I+++ K+L+ + +L G+ K +S+ V+ H L+ + + V LKV
Sbjct: 99 CPAIMTTN-TKDLIARIAYLSRAGISRKFLSSCVVKHPALLSHDVDQKLRPV---LKVLS 154
Query: 401 ESLC-QIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKA 459
+ L Q++++ L + + E VD + + Y+ EV
Sbjct: 155 DRLAPQVVRN----LVAIVPAVFARKPEMVD-----------DLISAFKYIGFQGEVDTW 199
Query: 460 LKQF----RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNY 515
L+ R + ++++ D L+ + V ++K P +L VL++K+D+L
Sbjct: 200 LQSMSWGVRFGPEAVRDKIDFLMSMDIHYRHVAVMLKAEPHILQVDNAVLKEKLDFLFKG 259
Query: 516 LCYPLESVVAFPAYLC-YDMGRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYF 574
+ +E ++ PAYL M R+ R K+ L+ RG+ + + L ++ F + F
Sbjct: 260 MKLDVEELLKCPAYLSKKSMDRVKIRWKVLSLLKSRGIIQ-RIHLKDMVTLPRKWFVETF 318
Query: 575 VDVHPE 580
V +P+
Sbjct: 319 VFKYPD 324
>gi|297792853|ref|XP_002864311.1| PTAC15 [Arabidopsis lyrata subsp. lyrata]
gi|297310146|gb|EFH40570.1| PTAC15 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 440 KTEFLLRLGYVENSEEVTKALKQF-RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVL 498
K FL+++GY ++E+ A+ R D +Q + GL + + + P VL
Sbjct: 361 KLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVL 420
Query: 499 NQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTL 557
+ LE+K++YL Y+ +E ++AFPA+L Y + RI HR + L+ RG +
Sbjct: 421 QYNYSSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEE--KLKSRG---ENM 475
Query: 558 SLSTILACSDAKFEK 572
SL+ +L SD +F K
Sbjct: 476 SLNKLLTVSDERFSK 490
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 224 GLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYNWDQ 280
GL+ V K+V P+++ + + +E LKE GF + + ++L P + + D
Sbjct: 298 GLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSEDN 357
Query: 281 VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQ 340
+S L FL KIGY F V S + + G L GL ++ ++ ++
Sbjct: 358 LSHKLGFLVKIGYKHRTKELAFAMGA--VTRTSSDNMQRVIGLYLSYGLSFEDILAMSTK 415
Query: 341 NPQILSSKFVKNLLQAVGFLIE 362
+PQ+L + +L + + +LIE
Sbjct: 416 HPQVLQYNY-SSLEEKLEYLIE 436
>gi|147817761|emb|CAN68939.1| hypothetical protein VITISV_028994 [Vitis vinifera]
Length = 1575
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 118/287 (41%), Gaps = 24/287 (8%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
L FL G++++Q+ L P LV + + +G+ ++ + +QNP
Sbjct: 898 VLAFLKNHGFSDIQIAKLITRLPRLVCSDPEETLLPKIEFFSSIGISGHDFTRIVTQNPN 957
Query: 344 ILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLK---GPKTVC-SKLKVG 399
I K + F+ + + +D L A M C ++ P K V
Sbjct: 958 IWFRSVEKRFVPCYDFIKSMVLS-EDKVVTTLKRAPRMLMCDMQTSIAPNIASLRKFGVT 1016
Query: 400 RESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKA 459
+ ++ ++ D P L ++K E + E VD +G+ E A
Sbjct: 1017 QSTVLFLVTDYPNILLRTSAKFEQHVREVVD----------------MGFDPKKSEFVHA 1060
Query: 460 LKQFRGRGDQLQERFDCLVQA-GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCY 518
L+ F G + +ER + + G + +++K PM L S+ + +D+L N + +
Sbjct: 1061 LRVFAGMSELSRERKMAIYRWFGWSEEEILSVLKTHPMCLILSEKKIMDGLDFLMNKMGW 1120
Query: 519 PLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPT-LSLSTIL 563
E+V P LCY + R+ RC + L+ +G+ K LS++L
Sbjct: 1121 QREAVARVPLVLCYSLNKRVIPRCSVXQVLQSKGLLKEADFYLSSVL 1167
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 24/299 (8%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
L FL G+++ Q+ L P LV + + +G++ + + +QNP
Sbjct: 1261 VLAFLKNHGFSDTQIAKLITRRPRLVCSDPEETLLPKIEFFNSIGIRGPDFTRILTQNPN 1320
Query: 344 ILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLK---GPK-TVCSKLKVG 399
I K L F+ + + +D + L A M C ++ P + K V
Sbjct: 1321 IWFRSVKKRLAPCYDFIRSVVLS-EDKAVTTLKGAPRMLMCDMQTSIAPNIALLRKFGVS 1379
Query: 400 RESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKA 459
+ +L ++ P L ++K E + E +D +G+ E A
Sbjct: 1380 QSTLLFLVTGFPNLLLRTSAKFEKHVREVLD----------------MGFDPKKSEFVHA 1423
Query: 460 LKQFRGRGDQLQER-FDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCY 518
L+ F G +ER + G + + +++K PM L S+ + +D+L N + +
Sbjct: 1424 LRVFAGISKLSRERKMAVYSRFGWSDHEILSVLKTHPMCLMLSEKKIMDGLDFLMNKMGW 1483
Query: 519 PLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPT-LSLSTILACSDAKFEKYFV 575
++V P LCY + R+ RC + L+ G+ K LS++L S+ F FV
Sbjct: 1484 QRKAVARVPLVLCYSLNKRVIPRCAVVQVLQSEGLLKEADFYLSSVLIPSEKVFLARFV 1542
>gi|302822565|ref|XP_002992940.1| hypothetical protein SELMODRAFT_431076 [Selaginella moellendorffii]
gi|300139285|gb|EFJ06029.1| hypothetical protein SELMODRAFT_431076 [Selaginella moellendorffii]
Length = 536
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 146/332 (43%), Gaps = 30/332 (9%)
Query: 255 KLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSG 314
+LK L + + R G S + E + FL + G N+ Q+ + K +PAL+
Sbjct: 17 RLKALAKDHTTLLRKYRGDPS----SLEENVRFLSRHGLNDTQMADAVKKHPALLLLDVA 72
Query: 315 QKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMV 374
+ L++ GL + + ++ S P I+++ K+L+ + +L G+ K +S+ V
Sbjct: 73 SDLEPRGKFLMEQGLSPSAIAAILSSCPAIMTTN-TKDLIARIAYLSRAGISRKFLSSCV 131
Query: 375 LMHAELMGSCSLKGPKTVCSKLKVGRESLC-QIIKDDPLKLFHLASKTEVKIDEQVDCQN 433
+ H L+ + + V LKV + L Q++++ L + + E VD
Sbjct: 132 VKHPALLSHDVDQKLRPV---LKVLSDRLAPQVVRN----LVAIVPAVFARKPEMVD--- 181
Query: 434 PSKDVEKTEFLLRLGYVENSEEVTKALKQF----RGRGDQLQERFDCLVQAGLDSNVVRN 489
+ + Y+ EV L+ R + ++++ D L+ + V
Sbjct: 182 --------DLISAFKYIGFQGEVDTWLQSMSWGVRFGPEAVRDKIDFLMSMDIHYRHVAV 233
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLC-YDMGRINHRCKMYVWLR 548
++K P +L VL++K+D+L + +E ++ PAYL M R+ R K+ L+
Sbjct: 234 MLKAEPHILQVDNAVLKEKLDFLFKGMKLDVEELLKCPAYLSKKSMDRVKIRWKVLSLLK 293
Query: 549 ERGVAKPTLSLSTILACSDAKFEKYFVDVHPE 580
RG+ + + L ++ F + FV +P+
Sbjct: 294 SRGIIQ-RIHLKDMVTLPRKWFVETFVFKYPD 324
>gi|357133737|ref|XP_003568480.1| PREDICTED: uncharacterized protein LOC100843561 [Brachypodium
distachyon]
Length = 504
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 148/350 (42%), Gaps = 38/350 (10%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L+ LG + + + Y G + LD+L KIG +L L + P ++
Sbjct: 112 VEFLRSLGLEPEDLAAYPLALGCSVRKNMVPVLDYLGKIGVRRNELPQLLRRYPQVLHAS 171
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
+ + L + ++ +V + + P++L K + +V +L+ IG+ + +
Sbjct: 172 IVVDLAPVVKYLQGMDVRPGDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVTRRQVGA 231
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLK---VGRESLCQIIKDDPLKL-FHLASKTEVKIDEQ 428
++ E++G K K L+ + R ++ +II+ P L F L + + I+
Sbjct: 232 VITRFPEVLGMRVGKIIKPFVEHLQGIGLQRLAVARIIEKKPYVLGFGLEERVKPNIEAL 291
Query: 429 VD------------CQNPS-------KDVEKTEFLLRLGYVENSEEVTKALKQFR----- 464
++ Q P + + + L + N ++ + +++
Sbjct: 292 LEFGVRKEALASIVIQYPDILGIELREKLVAQQSLFESNILVNHDDFGRVIERMPQAINL 351
Query: 465 GRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVV 524
GR L+ + L G + V +V P +L + D+++ +Y +N + LE +V
Sbjct: 352 GRAAVLKH-VNFLTACGFLLSQVSKMVVACPQLLALNMDIMKMNFEYFQNEMERDLEELV 410
Query: 525 AFPAYLCYDMGRINHRCKMYVWLRERGVAKP--TLSLSTILACSDAKFEK 572
FPA+ Y + + V R VAK T SL+ +L CSDAKF++
Sbjct: 411 EFPAFFTYGL-------ESTVRYRHEIVAKKGFTCSLAWLLNCSDAKFDE 453
>gi|225436753|ref|XP_002269809.1| PREDICTED: uncharacterized protein LOC100257975 [Vitis vinifera]
Length = 401
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 24/304 (7%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
L FL G+++ Q+ L P LV + + +G++ + + +QNP
Sbjct: 87 VLAFLKNHGFSDTQIAKLITRRPRLVCSDPEETLLPKIEFFNSIGIRGPDFTRILTQNPN 146
Query: 344 ILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLK---GPK-TVCSKLKVG 399
I K L F+ + + +D + L A M C ++ P + K V
Sbjct: 147 IWFRSVKKRLAPCYDFIKSVVLS-EDKAVTTLKGAPRMLMCDMQTSIAPNIALLRKFGVS 205
Query: 400 RESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKA 459
+ +L ++ P L ++K E + E +D +G+ E A
Sbjct: 206 QSTLLFLVTGFPNLLLRTSAKFEKHVREVLD----------------MGFDPKKSEFVHA 249
Query: 460 LKQFRGRGDQLQER-FDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCY 518
L+ F G +ER + G + + +++K PM L S+ + +D+L N + +
Sbjct: 250 LRVFAGISKLSRERKMAVYSRFGWSDHEILSVLKTHPMCLMLSEKKIMDGLDFLMNKMGW 309
Query: 519 PLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPT-LSLSTILACSDAKFEKYFVD 576
++V P LCY + R+ RC + L+ G+ K LS++L S+ F FV
Sbjct: 310 QRKAVARVPLVLCYSLNKRVIPRCAVVQVLQSEGLLKEADFYLSSVLIPSEKVFLARFVI 369
Query: 577 VHPE 580
+ E
Sbjct: 370 KYEE 373
>gi|356524605|ref|XP_003530919.1| PREDICTED: uncharacterized protein LOC100809590 [Glycine max]
Length = 499
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 154/381 (40%), Gaps = 76/381 (19%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L++LG D I Y G + L +L KIG +L K P ++
Sbjct: 109 VEFLQKLGLTVDDINNYPLMLGCSVRKNMIPVLGYLEKIGIARPKLGGFVKNYPQVLHAS 168
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
++ + L L ++ +++ + + P++L K + +V +L+ IG+ +DI
Sbjct: 169 VIVELAPVVKFLRGLDVEKDDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGP 228
Query: 373 MVLMHAELMGS-------------CSLKGPKTVCSKL----------------------- 396
MV + L+G L PK V +++
Sbjct: 229 MVTQYPYLLGMRVGTVIKPMIDYLVDLGLPKKVLARMLEKRAYVLGYDLEETVKPNVECL 288
Query: 397 ---KVGRESLCQIIKDDPLKLFHLASKTEVKIDE-------QVDCQNPSKDVEKTEFLLR 446
VGR+ L II P ++ L K ++ + +VD + ++ VE ++
Sbjct: 289 ISFGVGRDCLASIIAQYP-QILGLPLKAKLSTQQYFFSLKLKVDPEGFARVVENMPQVVS 347
Query: 447 LGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLE 506
L + + K ++ GR Q+ V ++V + P ++ ++++
Sbjct: 348 L----HQHVIMKPVEFLLGRTIPAQD--------------VASMVVKCPQLVALRVELMK 389
Query: 507 KKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILAC 565
+ K+ + PL+ +V FP Y Y + RI R Y L+ +G+ SL+ +L C
Sbjct: 390 NSYYFFKSEMGRPLQELVEFPEYFTYSLESRIKPR---YQRLKSKGI---RCSLNWMLNC 443
Query: 566 SDAKFEK----YFVDVHPEGP 582
SD +FE+ ++++ GP
Sbjct: 444 SDQRFEERLQGHYIETESVGP 464
>gi|224131316|ref|XP_002321054.1| predicted protein [Populus trichocarpa]
gi|222861827|gb|EEE99369.1| predicted protein [Populus trichocarpa]
Length = 521
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 140/346 (40%), Gaps = 36/346 (10%)
Query: 256 LKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ 315
L +LG + I Y G + LD+L K+G + + P ++
Sbjct: 141 LHKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHASVVV 200
Query: 316 KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
+ + L + +K N++ + + P+IL K + +V +L+ IG+ +++ ++
Sbjct: 201 DLDPVVKYLQGMDIKPNDIPRVLERYPEILGFKLEGTMSTSVAYLVGIGLARREVGGVLT 260
Query: 376 MHAELMG---SCSLKGPKTVCSKLKVGRESLCQIIKDDPLKL-FHLASKTEVKIDE---- 427
+ E++G +K L + R ++ ++I+ P L F L + + +
Sbjct: 261 RYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEEQVKPNVGSLLEF 320
Query: 428 --------QVDCQNPSK-DVEKTEFLL----------RLGYVENSEEVTKALKQFRGRGD 468
V Q P +E E LL LG + V K +
Sbjct: 321 NVRKSSLPSVVAQYPEIIGIELKEKLLGQQCLLHSVIDLGPEDFGRVVEKMPQVVSLSRL 380
Query: 469 QLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPA 528
+ + D L G VR +V P +L + D+++ DY + + PL+ +V FPA
Sbjct: 381 PIVKHVDFLKDCGFSLQQVRAMVVGCPQLLALNLDIMKHSFDYFQVEMERPLDDLVTFPA 440
Query: 529 YLCYDMGRINHRCKMYVWLRERGVAKPTL--SLSTILACSDAKFEK 572
+ Y + + + R + VAK + SLS +L CSD KFE+
Sbjct: 441 FFTYGL-------ESTIKPRHKRVAKKGMKCSLSWLLNCSDEKFEQ 479
>gi|255549639|ref|XP_002515871.1| conserved hypothetical protein [Ricinus communis]
gi|223545026|gb|EEF46540.1| conserved hypothetical protein [Ricinus communis]
Length = 454
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
Query: 438 VEKTEFLLRLGYVENSEEVTKALKQF-RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPM 496
V K FL+++GY ++E+T AL R D LQ+ + G S + ++ K+ P
Sbjct: 311 VHKIVFLVKIGYGYRNKELTVALGAVTRTSCDNLQKVIELFFSYGFSSPDILSMSKKHPQ 370
Query: 497 VLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKP 555
+L S L++K++YL + + ++AFPA+L Y + RI HR ++ +R V
Sbjct: 371 ILQYSYSSLQEKMEYLIEGMGREVGELLAFPAFLGYKLDDRIKHRYEV-----KRKVIGE 425
Query: 556 TLSLSTILACSDAKF 570
+SL+ +L+ S +F
Sbjct: 426 GMSLNKLLSVSADRF 440
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 225 LSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKEL-GFKNDWIG---RYLPGKGSYNWDQ 280
LS+ I ++ P +L +D + + +E LKE+ G + G R LP SY+ +
Sbjct: 177 LSRFGGIDIIVRRPMILNFDLDRQLIPRVEFLKEISGGDEEATGTLLRKLPAILSYSLEH 236
Query: 281 VSETLDFLYKIG-YNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFS 339
+ ++ L G + Q+ +F P ++ +K+ L + GL +E++ +
Sbjct: 237 IKGHVELLRSFGGLTDPQIFKIFLVFPNVISASKERKLRPRIEFLKQCGLNSDEIFKFLT 296
Query: 340 QNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSC 384
+ P L F NL+ + FL++IG G ++ V + A SC
Sbjct: 297 KAPLFLGLSFEYNLVHKIVFLVKIGYGYRNKELTVALGAVTRTSC 341
>gi|21593780|gb|AAM65747.1| unknown [Arabidopsis thaliana]
Length = 500
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 440 KTEFLLRLGYVENSEEVTKALKQF-RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVL 498
K FL+++GY ++E+ A+ R D +Q + GL + + + P VL
Sbjct: 361 KLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVL 420
Query: 499 NQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTL 557
+ LE+K++YL Y+ +E ++AFPA+L Y + RI HR + L+ RG +
Sbjct: 421 QYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEE--KLKSRG---ENM 475
Query: 558 SLSTILACSDAKFEK 572
SL+ +L S +F K
Sbjct: 476 SLNKLLTVSAERFSK 490
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 224 GLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYNWDQ 280
GL+ V K+V P+++ + + +E LKE GF + + ++L P + + +
Sbjct: 298 GLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSENN 357
Query: 281 VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQ 340
+S L FL KIGY F V S + + G L GL ++ ++ ++
Sbjct: 358 LSHKLGFLVKIGYKHRTKELAFAMGA--VTRTSSDNMQRVIGLYLSYGLSFEDILAMSTK 415
Query: 341 NPQILSSKFVKNLLQAVGFLIE 362
+PQ+L + +L + + +LIE
Sbjct: 416 HPQVLQYNYT-SLEEKLEYLIE 436
>gi|15239573|ref|NP_200229.1| plastid transcriptionally active 15 protein [Arabidopsis thaliana]
gi|10178167|dbj|BAB11580.1| unnamed protein product [Arabidopsis thaliana]
gi|19698993|gb|AAL91232.1| unknown protein [Arabidopsis thaliana]
gi|23198092|gb|AAN15573.1| unknown protein [Arabidopsis thaliana]
gi|332009080|gb|AED96463.1| plastid transcriptionally active 15 protein [Arabidopsis thaliana]
Length = 500
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 440 KTEFLLRLGYVENSEEVTKALKQF-RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVL 498
K FL+++GY ++E+ A+ R D +Q + GL + + + P VL
Sbjct: 361 KLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVL 420
Query: 499 NQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTL 557
+ LE+K++YL Y+ +E ++AFPA+L Y + RI HR + L+ RG +
Sbjct: 421 QYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEE--KLKSRG---ENM 475
Query: 558 SLSTILACSDAKFEK 572
SL+ +L S +F K
Sbjct: 476 SLNKLLTVSAERFSK 490
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 224 GLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYNWDQ 280
GL+ V K+V P+++ + + +E LKE GF + + ++L P + + +
Sbjct: 298 GLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSENN 357
Query: 281 VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQ 340
+S L FL KIGY F V S + + G L GL ++ ++ ++
Sbjct: 358 LSHKLGFLVKIGYKHRTKELAFAMGA--VTRTSSDNMQRVIGLYLSYGLSFEDILAMSTK 415
Query: 341 NPQILSSKFVKNLLQAVGFLIE 362
+PQ+L + +L + + +LIE
Sbjct: 416 HPQVLQYNYT-SLEEKLEYLIE 436
>gi|358248076|ref|NP_001239807.1| uncharacterized protein LOC100816929 [Glycine max]
gi|255638191|gb|ACU19409.1| unknown [Glycine max]
Length = 335
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 138/301 (45%), Gaps = 30/301 (9%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
++ SE D+L IG E +L ++ P ++ +K+ L LG K NEV S
Sbjct: 42 ERASENWDYLRSIGIEERKLPSIVSKCPKILALDLYEKIVPTVECLRTLGTKPNEVASAI 101
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMG-SCSLKGPKTV--CSK 395
++ P ILS+ + L + F +G+ K I M+L++ L+ S + K + V +
Sbjct: 102 AKFPHILSNSVEEKLCPLLAFFQTLGIPEKQIGKMILLNPRLVSYSIATKLTEIVNFLAN 161
Query: 396 LKVGRESLC-QIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVE--- 451
L + ++ + ++I DP + + +D+++ P+ +EFL +G E
Sbjct: 162 LGLNKDGMIGKVIVRDPYIMGY-------SVDKRL---RPT-----SEFLKSIGLSEADL 206
Query: 452 NSEEVTKALKQFRGRGDQLQERFDCLVQAGL-DSNVVRNIVKRAPMVLNQSKDVLEKKID 510
+ V R L + L + G D +V +V P+++ ++ LE +I
Sbjct: 207 QAVAVNFPAILSRDVNKLLVPNYAYLKKRGFEDRQIVALVVGFPPILIKSIQNSLEPRIK 266
Query: 511 YLKNYLCYPLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPTLSLSTILACSDAK 569
+L + + ++ V+ +P + + + RI R K+ L+ER + SLS +L C+ K
Sbjct: 267 FLVDVMGRQVDEVIDYPCFFRHGLKRRIEPRYKL---LKERSL---NCSLSEMLDCNRKK 320
Query: 570 F 570
F
Sbjct: 321 F 321
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 213 LASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKND-WIGRYL- 270
L L ++ LG+ + + K++ P L+ + ++ +++ L LG D IG+ +
Sbjct: 116 LCPLLAFFQTLGIPEKQIGKMILLNPRLVSYSIATKLTEIVNFLANLGLNKDGMIGKVIV 175
Query: 271 --PGKGSYNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKL 327
P Y+ D+ + T +FL IG +E L + PA++ + + + L K
Sbjct: 176 RDPYIMGYSVDKRLRPTSEFLKSIGLSEADLQAVAVNFPAILSRDVNKLLVPNYAYLKKR 235
Query: 328 GLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMG 366
G + ++ +L P IL +L + FL+++ MG
Sbjct: 236 GFEDRQIVALVVGFPPILIKSIQNSLEPRIKFLVDV-MG 273
>gi|294460205|gb|ADE75685.1| unknown [Picea sitchensis]
Length = 355
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 24/288 (8%)
Query: 292 GYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKM-NEVYSLFSQNPQILSSKFV 350
G ++ F+ N ++ S Q + L GL ++ + NP+ +
Sbjct: 65 GLTPEEIAKAFRYNKEVIHAKSTQNFKEVLELLKGCGLTTPAQIRRVVLNNPKFFCPRAE 124
Query: 351 KNLLQAVGFLIEIGMGMKDISNMVLMHAELMG--SCSLKGPKTVCSKLKVGRESLCQIIK 408
+N+ +G L + M +DI +V+ H + LK ++ KL ++L ++I
Sbjct: 125 RNIQSKLGLLRTV-MKEEDIGKLVISHGRIFHYRENKLKSAISLLQKLCGEGQALSELIA 183
Query: 409 DDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRG- 467
P +L ++ +T ++ +Q + LG + S+ ++ G G
Sbjct: 184 TQP-RLLMVSEETVLESFKQAE---------------DLGCQKGSKMFACVMRGILGTGK 227
Query: 468 DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFP 527
+QL+ R CL + V+ +++R P++L S++ ++ ++D+L L +PL+ +V +P
Sbjct: 228 EQLERRLQCLSSCFSEKQVL-ELLRRWPLILGYSEENVKHRVDFLVKSLGFPLDYLVKYP 286
Query: 528 AYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF-EKY 573
A Y + RI R ++ L+ V K L I + ++ +F EKY
Sbjct: 287 ALFGYSLEKRIIPRYRVMEALKSVQVLKTELICPYIYSLTEKRFLEKY 334
>gi|224135875|ref|XP_002327325.1| predicted protein [Populus trichocarpa]
gi|222835695|gb|EEE74130.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 142/350 (40%), Gaps = 38/350 (10%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L+ +G D I Y G + L +L KIG + +L K+ P ++
Sbjct: 121 VEFLQRMGLTIDDINEYPLMLGCSVRKNIIPVLGYLEKIGISRSKLGEFVKSYPQVLHAS 180
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
++ + L L + ++ + + P++L K + +V +L+ IG+ +DI
Sbjct: 181 VVVELQPVIKFLRGLDVDKLDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGP 240
Query: 373 MVLMHAELMGS-------------CSLKGPKTVCSKLKVGRE-----SLCQIIKDDPLKL 414
MV + L+G SL PK + +++ R L + +K + L
Sbjct: 241 MVTQYPYLLGMRVGTMIKPLVDYLVSLGLPKKIVARMLEKRPYVLGYDLQETVKPNVDCL 300
Query: 415 FHLASKTEVKIDEQVDCQNPS-------KDVEKTEFLLRLGYVENSEEVTKALKQFRG-- 465
+ EV + Q P + ++ L + E + +++
Sbjct: 301 ISFGIRREVL--ASIVAQYPPILGLPLKAKLSSQQYFFNLKLKIDPERFARVIEKMPQIV 358
Query: 466 --RGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESV 523
+ + + L++ + S V +V + P +L +++ + K+ + PL+ +
Sbjct: 359 SLNQNVIMKPVQFLLERAIPSEDVATMVIKCPQLLALRVPLMKNSYYFFKSEMGRPLKEL 418
Query: 524 VAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
V FP Y Y + RI R +M L+ +G+ SL+ L CSD +FE+
Sbjct: 419 VEFPEYFTYSLESRIKPRYEM---LKSKGIRS---SLNWFLNCSDKRFEE 462
>gi|294462247|gb|ADE76674.1| unknown [Picea sitchensis]
Length = 335
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 26/212 (12%)
Query: 401 ESLCQIIKDDPLKLFHLASKT-EVKID------------EQVDCQNP---SKDVEKT--E 442
+ +C+II +P L + A + + KI+ V CQ P S +EKT
Sbjct: 111 DQVCKIITRNPSILTYNADRQLKPKIEFMKTLGLTAHEIGNVTCQGPRLLSHSIEKTVQP 170
Query: 443 FLLRLGYVENSE-EVTKALKQFRG------RGDQLQERFDCLVQAGLDSNVVRNIVKRAP 495
+L L + SE +V+K LK+ G ++L+ + L G+ N ++++V+R P
Sbjct: 171 NILYLQNLFGSEADVSKVLKRVPGILVNTNMPERLRNKLKYLASFGIPENEIKDLVRRNP 230
Query: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAK 554
++LN S D ++K +D++ + P + +++ P + + RI R K+ + + ++
Sbjct: 231 VILNVSMDKMQKNMDFIIHTAGLPAKFLLSCPLLPAFSLESRIKPRHKVLMSISALQPSE 290
Query: 555 PTLSLSTILACSDAKFEKYFVDVHPEGPAMWE 586
SL+ +L+ S+ KF + +V+ P + E
Sbjct: 291 RLPSLTYVLSLSERKFLEKYVNCSPYATKLLE 322
>gi|297814001|ref|XP_002874884.1| mitochondrial transcription termination factor family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297320721|gb|EFH51143.1| mitochondrial transcription termination factor family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 145/348 (41%), Gaps = 34/348 (9%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L +LG + I Y G + LD+L K+G + + P ++
Sbjct: 144 VEFLHKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFAEFLRRYPQVLHAS 203
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
+ + L L +K ++V + + P++L K + +V +L+ IG+ ++I
Sbjct: 204 VVIDLAPVVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGG 263
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLK---VGRESLCQIIKDDPLKL-FHL--ASKTEVKID 426
++ + E++G + K + L+ + R ++ ++I+ P L F L K V+I
Sbjct: 264 VLTRYPEILGMRVARIIKPLVEYLENLGIPRLAVARLIEKRPHILGFELDDTVKPNVQIL 323
Query: 427 EQVDCQNPS-----------------KDVEKTEFLLRLGYVENSEEV---TKALKQFRGR 466
+ D + S +E + LL N E++ + + QF
Sbjct: 324 QDFDVRETSLPSIIAQYPEIIGIDLKPKLETQKKLLCSAIDLNPEDLGSLIERMPQFVSL 383
Query: 467 GDQ-LQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVA 525
+ + + D L + G + R +V P VL + +++ +Y + + PL+ +V
Sbjct: 384 SESPMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMRRPLQDLVD 443
Query: 526 FPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
FPA+ Y + + R K + SL+ +L CSD KFE+
Sbjct: 444 FPAFFTYGLESTVKPRHKKIIKKGI------KCSLAWMLNCSDEKFEQ 485
>gi|168049743|ref|XP_001777321.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671297|gb|EDQ57851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 315
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 19/307 (6%)
Query: 281 VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQ 340
V ++FL +G + Q+ N+ +P L+ + + L LG++ ++ +LF
Sbjct: 17 VKPNIEFLCSLGLRKEQVGNIIVRSPQLLSYSVKKNLLPKIAYLESLGVERGKIITLF-- 74
Query: 341 NPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGR 400
P I+ NL+ + + IGM +V ++G + K KV
Sbjct: 75 -PAIIGYSIEDNLIPKMKYFESIGMERASFGRVVTRSPSILGLSVEQNLKP-----KVAF 128
Query: 401 ESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKAL 460
+ + D +LF S V + +D SK FL LG S+ + KAL
Sbjct: 129 FEANGVKEKDIARLF--TSHPSV-VGRAIDGSLASK----LTFLASLGLEPKSDAMAKAL 181
Query: 461 KQFRGRG-DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYP 519
+ L+ + + L++ G + NIV + P +L+ + L+ K+ + +
Sbjct: 182 VACAAQSVTSLEMKCNNLLEIGFPQKALLNIVIQQPTLLHLCEAHLKCKVKFYTEEVGLA 241
Query: 520 LESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVH 578
+E + P+ L Y + RI R K L+ G+ + +ST+++ + F K FV+ +
Sbjct: 242 VEELP--PSLLSYSLENRIKPRYKWMTLLQSSGLLSRKIPISTVMSICEKSFLKKFVEPY 299
Query: 579 PEGPAMW 585
P+ A +
Sbjct: 300 PQMVAQY 306
>gi|224284289|gb|ACN39880.1| unknown [Picea sitchensis]
Length = 542
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 147/355 (41%), Gaps = 56/355 (15%)
Query: 221 ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYN 277
E LG+ K+ + L+ P +L V V++ L L K + I R + P +
Sbjct: 181 EKLGVRKSVLPDLLRRYPQVLHSSVVIDLQPVVKFLGGLDIKANDIPRVIENYPELLGFK 240
Query: 278 WD-QVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYS 336
+ +S ++ +L IG + + + P ++ G+ + + L+ LGL+ V S
Sbjct: 241 LEGTMSTSVVYLVSIGVDRRSIGAMLTRCPQILAMRVGRVIKPIVDYLVSLGLRKEVVAS 300
Query: 337 LFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKL 396
+ + P IL + + Q V L+ G+ + ++++++ + E++G + KL
Sbjct: 301 ILEKKPYILGFSLEEQMKQNVESLLSFGVRYEALASIIVQYPEILG-------LDLRPKL 353
Query: 397 KVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEV 456
+ +E +K P L K QV + +++ E L G+ ++E++
Sbjct: 354 MLQQEFFKSYMKIGPEDFGRLLEKMS-----QVAVLSQDPVLKRIELLRAWGF--STEDI 406
Query: 457 TKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYL 516
TK +V P +L + DV+ +Y ++ +
Sbjct: 407 TK-------------------------------MVVTCPQLLALNMDVMTFSFNYFRHEM 435
Query: 517 CYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
L+ +V FPAY Y + RI R + L +G+ SLS L+CSD +F
Sbjct: 436 KRSLQDLVGFPAYFTYSLETRIKPRFRK---LSRKGI---KCSLSWFLSCSDERF 484
>gi|168006705|ref|XP_001756049.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692559|gb|EDQ78915.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 408
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 30/257 (11%)
Query: 324 LLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGS 383
L+ LG+ ++ S+ ++ PQIL + N+ + V FL G+ DI+ M+ + +G
Sbjct: 162 LVMLGVNPRKMGSILTEMPQILGMRVGNNIKRKVDFLKRFGLTSSDIAKMIETRPQFLGL 221
Query: 384 CSLKGPKTVCSKL---KVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEK 440
+ V + L V ++++ ++I P L ++K+ E++
Sbjct: 222 SLEDQMQPVLNNLVEIGVTQDTVGRVIMQFP---DILGLDVKLKLAERL----------- 267
Query: 441 TEFLLRLGYVENS--EEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVL 498
T +G +S E + K + + ER + L QAG S+ V ++V P +L
Sbjct: 268 TWLTSEVGISADSLGEVIAKLPQILIINTTKANERVEFLRQAGFSSD-VGSMVTNCPQLL 326
Query: 499 NQSKD-VLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTL 557
S D LE + YL + LE VV FPAYL Y++ + + R + K ++
Sbjct: 327 AASIDKSLEPNLAYLVGKMRRKLEEVVEFPAYLLYNL-------EETIQPRHEEITKRSM 379
Query: 558 --SLSTILACSDAKFEK 572
SL+ +L C+D F++
Sbjct: 380 ECSLAWMLNCTDDVFQQ 396
>gi|297828125|ref|XP_002881945.1| hypothetical protein ARALYDRAFT_903808 [Arabidopsis lyrata subsp.
lyrata]
gi|297327784|gb|EFH58204.1| hypothetical protein ARALYDRAFT_903808 [Arabidopsis lyrata subsp.
lyrata]
Length = 508
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 167/398 (41%), Gaps = 64/398 (16%)
Query: 212 VLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLP 271
V+ ++ + LGL+ I ++ P +L V + VL L+++G +G ++
Sbjct: 112 VMCERVEFLQKLGLT----IDDINEYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVK 167
Query: 272 GKGSYNWDQV---------SETLDFLYKIGYNEVQLLNLFKTNPALV---FEGSGQKVYV 319
N+ QV + + FL + + L + P L+ EG+ +
Sbjct: 168 -----NYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGT---MST 219
Query: 320 LFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAE 379
L+ +G+ ++ + +Q P +L + + V +LI IG+ K ++ M+ A
Sbjct: 220 SVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRAY 279
Query: 380 LMG---SCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDE-------QV 429
++G ++K V +E L +I P ++ L K ++ + ++
Sbjct: 280 IVGYNLEETVKPNVDCLISFGVKKELLPLLIAQYP-QILGLPVKAKMSTQQYFFSLKLKI 338
Query: 430 DCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRN 489
D + ++ VEK ++ L + K ++ GR Q+++ +
Sbjct: 339 DPEGFARVVEKMPQIVSL----KQNVIMKPIEFLLGRAFQVED--------------IAK 380
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
+V R P +L ++++ + K + P++ +V +P Y Y + RI R Y L+
Sbjct: 381 MVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPR---YQKLQ 437
Query: 549 ERGVAKPTLSLSTILACSDAKFEKY----FVDVHPEGP 582
+G+ SL+ L CSD +FE+ F+D EGP
Sbjct: 438 SKGIRS---SLNWFLNCSDQRFEERLQGNFIDPDTEGP 472
>gi|224132470|ref|XP_002328286.1| predicted protein [Populus trichocarpa]
gi|222837801|gb|EEE76166.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 131/298 (43%), Gaps = 24/298 (8%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
D+ SE +L IG E +L ++ P ++ G +K+ + L LG K EV S
Sbjct: 41 DRASENWAYLKTIGIQERKLPSIISKCPKILTLGLNEKLIPMVECLATLGSKPREVASAI 100
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMG---SCSLKGPKTVCSK 395
++ P ILS + L + F IG+ K + ++L++ L+ LK +
Sbjct: 101 TKFPHILSHSVEEKLCPLLAFFQAIGVPEKQLGRILLLNPRLVSYSIDSKLKEIVDFLAS 160
Query: 396 LKVGRESLC-QIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSE 454
L + ++ + +++ P + K E + K V TE LR + E
Sbjct: 161 LGLTKDGMIGKVLVKHPFITGYSVEKRLRPTSEFL------KSVGLTELDLRTVVMNFPE 214
Query: 455 EVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS-KDVLEKKIDYLK 513
+ + + + L+ F L + G + + +V P +L +S K+ LE +I +L
Sbjct: 215 VLCRDVNKI------LKPNFAYLRRCGFNDRQIAALVTGYPPILIKSVKNSLEPRIKFLV 268
Query: 514 NYLCYPLESVVAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
+ ++ VV +P++ + + + + R K+ L++R K SLS +L C+ KF
Sbjct: 269 EVMGRQIDEVVDYPSFFQHGLKKTLESRHKL---LKQR---KLDCSLSDMLGCNQKKF 320
>gi|125552291|gb|EAY98000.1| hypothetical protein OsI_19914 [Oryza sativa Indica Group]
Length = 365
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 138/319 (43%), Gaps = 38/319 (11%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
LD+L K+G + L +L + P ++ + + L + ++ ++V + + P+
Sbjct: 4 VLDYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPHDVPRVLERYPE 63
Query: 344 ILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLK---VGR 400
+L K + ++ +L+ IG+ + + +++ E++G K K L+ + R
Sbjct: 64 LLGFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQR 123
Query: 401 ESLCQIIKDDPLKL-FHLASKTEVKIDEQVD------------CQNPS-------KDVEK 440
++ +II+ P L F L K + I+ ++ Q P +
Sbjct: 124 LAIARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRKEALAFIVAQYPDILGIELRDKLAA 183
Query: 441 TEFLLRLGYVENSEEVTKALKQFR-----GRGDQLQERFDCLVQAGLDSNVVRNIVKRAP 495
+ L + +SE+ + +++ GR L+ + L G + V +V P
Sbjct: 184 QQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLK-HVNFLTSCGFLLSQVSKMVVACP 242
Query: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKP 555
+L + D+++ +Y +N + L +V FPA+ Y + + V R VAK
Sbjct: 243 QLLALNMDIMKMSFEYFQNEMERDLVELVEFPAFFTYGL-------ESTVRPRHEMVAKK 295
Query: 556 --TLSLSTILACSDAKFEK 572
T SL+ +L CSDAKF++
Sbjct: 296 GFTCSLAWLLNCSDAKFDE 314
>gi|449455138|ref|XP_004145310.1| PREDICTED: uncharacterized protein LOC101222814 [Cucumis sativus]
gi|449472883|ref|XP_004153723.1| PREDICTED: uncharacterized protein LOC101222366 [Cucumis sativus]
gi|449514567|ref|XP_004164414.1| PREDICTED: uncharacterized LOC101222366 [Cucumis sativus]
Length = 594
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 165/439 (37%), Gaps = 95/439 (21%)
Query: 103 GYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSLMRF----LRYNPINEFEPFFESLGLSQ 158
G D I KN+ + NL I DV ++L F R ++ ES GL
Sbjct: 200 GSGDGILIGKNARRMMTNL--SIPPDDDVQQTLSFFEKIEARRGGLDMLSSNEESFGL-- 255
Query: 159 SELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLW 218
L PR L+ LS + + L GIP+ +M +++ + D VL S++
Sbjct: 256 --LLESFPRMLL-LSVESHVKPMVEFLEKIGIPKERMRSIFLLFPPVIFFDTEVLKSRIM 312
Query: 219 AYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNW 278
A+E +G+ KL+ K WI +
Sbjct: 313 AFEEVGVEVTVFGKLL--------------------------LKYPWI------TSNCIH 340
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
+ + + F ++N + P L+ S K+ ++ RL LG++ ++ +
Sbjct: 341 GNLKQIVSFFESEKVPSASIINAISSWP-LILGSSTSKLELMVDRLDGLGVRSKKLGQVI 399
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSC---SLKGPKTVCSK 395
+ +PQIL K + LQ V FL E+G + I ++ E+ + +LK K
Sbjct: 400 ATSPQILLLK-PQEFLQVVSFLEEVGFDKESIGRIIARCPEISATSVEKTLKRKLEFLIK 458
Query: 396 LKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEE 455
+ V + L + IK P ++ +P K +
Sbjct: 459 IGVSKTHLPRAIKKYP----------------ELLVSDPHKTLHPR-------------- 488
Query: 456 VTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNY 515
+K R RG L ER ++ +V+ +P++ ++VL K+D+L N
Sbjct: 489 ----IKYLRQRG--LSER-----------DIASMVVRFSPLLGYSIEEVLRPKLDFLVNI 531
Query: 516 LCYPLESVVAFPAYLCYDM 534
+ P + VV +P Y Y +
Sbjct: 532 MKKPKKEVVDYPRYFSYSL 550
>gi|15232683|ref|NP_190279.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|5541664|emb|CAB51170.1| putative protein [Arabidopsis thaliana]
gi|15028091|gb|AAK76576.1| unknown protein [Arabidopsis thaliana]
gi|21436341|gb|AAM51340.1| unknown protein [Arabidopsis thaliana]
gi|332644702|gb|AEE78223.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 450
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 142/353 (40%), Gaps = 64/353 (18%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
L+ L G+ + Q+ + + P L+ + + + L G +EV + S P
Sbjct: 87 VLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPT 146
Query: 344 ILSSK----------FVKNLLQ-AVGFLIEIGMGMKD--ISNMVLMH-----AELMGSCS 385
IL K FVK+++Q I G K I N+ ++ +L+ S
Sbjct: 147 ILDKKGEESVSLYYDFVKDIMQDGKSLCISCPEGKKGNRIRNISVLRELGVPQKLLFSLL 206
Query: 386 LKGPKTVCSKLKVGRESLCQIIKD--DPLK---------LFHLASKTEVKIDEQVDCQ-- 432
+ + VC K K ESL +++ DP K ++ ++ KT I+E+V+
Sbjct: 207 ISRYQPVCGKEKF-EESLKKVVDMGFDPAKSKFVEALHVVYEMSEKT---IEEKVNVYKR 262
Query: 433 ---------------------NPSKDVEKTEFLLRLGYVENSEEVTKALKQ----FRGRG 467
+ K + E L + G VE EE+ LK R
Sbjct: 263 LGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVE--EEIISVLKSRPQCIRSSE 320
Query: 468 DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFP 527
++ + + + G + + +VKR P S + L KK + L + +PLE+VV P
Sbjct: 321 QKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIP 380
Query: 528 AYLCYDM-GRINHRCKMYVWLRERG-VAKPTLSLSTILACSDAKFEKYFVDVH 578
L Y + RI R + L +G + +S++L C+D +F K +V H
Sbjct: 381 TVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRYVMKH 433
>gi|388514893|gb|AFK45508.1| unknown [Lotus japonicus]
Length = 328
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 135/308 (43%), Gaps = 36/308 (11%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
++ +E ++L IG E +L + P ++ G +K+ + L LG K +EV S
Sbjct: 43 EKANENWEYLRSIGIQERKLPSTVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAI 102
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMG-SCSLKGPKTV--CSK 395
++ P ILS + L + F +G+ K I M+L++ L+ S K + V +
Sbjct: 103 AKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAG 162
Query: 396 LKVGRESLC-QIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSE 454
L + ++ + +++ DP + + E ++ P+ ++FL +G E
Sbjct: 163 LGLNKDGMIGKVLVKDP---YIMGYSVEKRL-------GPT-----SQFLKSIGLAEKDL 207
Query: 455 EVTKALKQF-----RGRGDQLQERFDCLVQAGL-DSNVVRNIVKRAPMVLNQSKDVLEKK 508
+V F R L L + G D +V +V P+++ ++ LE +
Sbjct: 208 QVVAM--NFPSILSRDVNKLLVPNHAYLKKCGFQDRQIVDLVVGFPPILIKSIQNSLEPR 265
Query: 509 IDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLS--LSTILACS 566
I +L + + ++ VV +P + H K + LR + + + LS LS +L C+
Sbjct: 266 IKFLVDVMGRQVDEVVDYPCFF-------RHGLKKKLQLRHKFLKQRNLSCSLSEMLDCN 318
Query: 567 DAKFEKYF 574
+ KF+ F
Sbjct: 319 EKKFQMKF 326
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 214 ASKLWAY-ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL-- 270
A++ W Y ++G+ + + VS CP +L G++ + V ++E LK LG K + +
Sbjct: 45 ANENWEYLRSIGIQERKLPSTVSKCPKILALGLNEKIVPMVECLKTLGTKPHEVASAIAK 104
Query: 271 -PGKGSYNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLG 328
P S++ ++ + L F +G E Q+ + NP L+ K+ + L LG
Sbjct: 105 FPHILSHSVEEKLCPLLAFFQALGVPEKQIGKMILLNPRLISYSIETKMAEIVDFLAGLG 164
Query: 329 L-KMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDIS 371
L K + + ++P I+ K L FL IG+ KD+
Sbjct: 165 LNKDGMIGKVLVKDPYIMGYSVEKRLGPTSQFLKSIGLAEKDLQ 208
>gi|4417266|gb|AAD20391.1| hypothetical protein [Arabidopsis thaliana]
gi|20198096|gb|AAM15397.1| hypothetical protein [Arabidopsis thaliana]
Length = 673
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 155/370 (41%), Gaps = 66/370 (17%)
Query: 251 KVLEKLKELGFKNDWIGRYLPGKG----SYNWDQVSETLDFLYKIGYNEVQLLNLFKTNP 306
+++E L+ G + DW+G Y+ G+ S++ ++V +DF K+G N+ + P
Sbjct: 283 EIVEYLESNGVRRDWMG-YVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYP 341
Query: 307 ALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNL--LQAVGFLIEIG 364
++ S Q V+ ++LK +LF+ LS KF+ L L + +L E G
Sbjct: 342 KIIGFFSFQ---VMEKKVLK---------ALFNTPALRLSFKFIIVLLVLNQINYLKEFG 389
Query: 365 MGMKDISNMVLMHAELMGSCSLKGPKTVCSK----LKVGRESLCQIIKDDPLKLFHLASK 420
+ +++ ++ LMG CS++ K L + +E + +I+ P+ K
Sbjct: 390 LSTEEVGRLLAYKPHLMG-CSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEK 448
Query: 421 T----------EVKIDEQVDCQN----------PS-------KDVEKTEFLL-RLGYVEN 452
T V+ +++ N PS K + FLL R G +
Sbjct: 449 TIAPKVVELRYNVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVIFLLTRAGVTQ- 507
Query: 453 SEEVTKALKQFRGR-----GDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEK 507
+++ K + G +L+ + G+ + ++ PM+L + D L
Sbjct: 508 -KDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRP 566
Query: 508 KIDYLKNYLCYPLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPTLSLSTILACS 566
K YL+ + PL+ ++ FP + Y + RI R + V R L +LAC+
Sbjct: 567 KYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR------VNFKLRYMLACT 620
Query: 567 DAKFEKYFVD 576
D +FE+ D
Sbjct: 621 DEEFERRVRD 630
>gi|356548262|ref|XP_003542522.1| PREDICTED: uncharacterized protein LOC100793256 [Glycine max]
Length = 335
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 34/303 (11%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
++ SE D+L IG E +L ++ P ++ K+ L LG K NEV S
Sbjct: 42 ERASENWDYLRSIGIEERKLPSIVSKCPKILALDLYGKIVPTVECLRTLGTKPNEVASAI 101
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMG-SCSLKGPKTVCSKLK 397
++ P ILS+ + L + F +G+ K I M+L++ L+ S K + V +
Sbjct: 102 AKFPHILSNSVEEKLCPLLAFFQTLGIPEKQIGKMILLNPRLISYSIETKLTEIVNFLVN 161
Query: 398 VGRES---LCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSE 454
+G + ++I DP + + +D+++ P+ D FL +G E
Sbjct: 162 LGLSKDGMIGKVIVRDPYIMGY-------SVDKRL---RPTSD-----FLKSIGLSEADL 206
Query: 455 EVTKALKQF-----RGRGDQLQERFDCLVQAGLDS-NVVRNIVKRAPMVLNQSKDVLEKK 508
+ F R L + L + G + +V +V P+++ ++ LE +
Sbjct: 207 QAVAV--NFPGILSRDVNKLLVPNYAYLKKRGFEERQIVALVVGFPPILIKSIQNSLEPR 264
Query: 509 IDYLKNYLCYPLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPTLSLSTILACSD 567
I +L + + ++ V+ +P + + + RI R K+ L+ER + SLS +L C+
Sbjct: 265 IKFLVDVMGRQVDEVIDYPCFFRHGLKRRIEPRYKL---LKERSL---NCSLSEMLDCNR 318
Query: 568 AKF 570
KF
Sbjct: 319 KKF 321
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 6/168 (3%)
Query: 214 ASKLWAY-ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPG 272
AS+ W Y ++G+ + + +VS CP +L + + V +E L+ LG K + + +
Sbjct: 44 ASENWDYLRSIGIEERKLPSIVSKCPKILALDLYGKIVPTVECLRTLGTKPNEVASAIAK 103
Query: 273 KGSYNWDQVSETL----DFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLG 328
+ V E L F +G E Q+ + NP L+ K+ + L+ LG
Sbjct: 104 FPHILSNSVEEKLCPLLAFFQTLGIPEKQIGKMILLNPRLISYSIETKLTEIVNFLVNLG 163
Query: 329 L-KMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVL 375
L K + + ++P I+ K L FL IG+ D+ + +
Sbjct: 164 LSKDGMIGKVIVRDPYIMGYSVDKRLRPTSDFLKSIGLSEADLQAVAV 211
>gi|297837213|ref|XP_002886488.1| hypothetical protein ARALYDRAFT_893270 [Arabidopsis lyrata subsp.
lyrata]
gi|297332329|gb|EFH62747.1| hypothetical protein ARALYDRAFT_893270 [Arabidopsis lyrata subsp.
lyrata]
Length = 463
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 438 VEKTEFLLRLGYVENSEEVTKALKQ----FRGRGDQLQERFDCLVQAGLDSNVVRNIVKR 493
++ E L R G E +EV K+ R Q+ + + G + +VKR
Sbjct: 301 IQTFEALKRCGLCE--DEVMSVFKKNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVKR 358
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGV 552
P + S ++++KK +++ + +PL+ + FP L Y M RI RC + L +G
Sbjct: 359 FPQCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRIVPRCNVIKALMSKGS 418
Query: 553 AKPTL-SLSTILACSDAKFEKYFVDVHPE 580
L + ++LAC+D F +V H E
Sbjct: 419 LGSELPPMPSVLACTDQTFLNRYVVEHDE 447
>gi|449453646|ref|XP_004144567.1| PREDICTED: uncharacterized protein LOC101218706 [Cucumis sativus]
gi|449500128|ref|XP_004161012.1| PREDICTED: uncharacterized protein LOC101225990 [Cucumis sativus]
Length = 328
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 6/174 (3%)
Query: 214 ASKLWAY-ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL-- 270
AS+ W Y E +G+ K + +VS CP +L G+ + V ++E L L K I +
Sbjct: 44 ASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAIAK 103
Query: 271 -PGKGSYNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLG 328
PG SY+ ++ + L F +G E QL + NP L+ K+ L +G
Sbjct: 104 FPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVG 163
Query: 329 L-KMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELM 381
L K + + ++NP ++ K L V FL IG+ D+ + L +++
Sbjct: 164 LTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDIL 217
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 134/305 (43%), Gaps = 38/305 (12%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
++ SE ++L +IG + +L ++ P ++ G +K+ + L L K +E+ +
Sbjct: 42 ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAI 101
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMG-SCSLKGPKTVCSKLK 397
++ P ILS + L + F +G+ K + M+L++ L+ S K +TV
Sbjct: 102 AKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAG 161
Query: 398 VG--RESLC-QIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSE 454
VG +E + +++ +P + + +D+++ P+ EFL +G N
Sbjct: 162 VGLTKEGVIGKVLAKNPFLMGY-------SVDKRL---RPT-----VEFLKSIGL--NKM 204
Query: 455 EVTKALKQF-----RGRGDQLQERFDCLVQAGL-DSNVVRNIVKRAPMVLNQSKDVLEKK 508
++ +F R L+ D L G D +V + P+++ + LE +
Sbjct: 205 DLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPR 264
Query: 509 IDYLKNYLCYPLESVVAFPAYLCYDMGR---INHRCKMYVWLRERGVAKPTLSLSTILAC 565
I +L + LE V +P + + + + + HR L+E+ V +LS +L C
Sbjct: 265 IRFLVEIMGRKLEEVAEYPDFFKHGLKKKLELRHR-----LLKEKNV---DFALSELLEC 316
Query: 566 SDAKF 570
+ KF
Sbjct: 317 NQKKF 321
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 220 YENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGF-KNDWIGRYL---PGKGS 275
++ LG+ + + K++ P L+ ++S+ V+ ++ L +G K IG+ L P
Sbjct: 123 FQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAGVGLTKEGVIGKVLAKNPFLMG 182
Query: 276 YNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEV 334
Y+ D+ + T++FL IG N++ L + P ++ + + L G K E+
Sbjct: 183 YSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDVDKVLRYNLDYLRSRGFKDGEI 242
Query: 335 YSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMK 368
SL + P +L +L + FL+EI MG K
Sbjct: 243 VSLVTGYPPVLIKSIQHSLEPRIRFLVEI-MGRK 275
>gi|18406426|ref|NP_566005.1| transcription termination factor domain-containing protein
[Arabidopsis thaliana]
gi|3212859|gb|AAC23410.1| expressed protein [Arabidopsis thaliana]
gi|14532592|gb|AAK64024.1| unknown protein [Arabidopsis thaliana]
gi|19310761|gb|AAL85111.1| unknown protein [Arabidopsis thaliana]
gi|330255268|gb|AEC10362.1| transcription termination factor domain-containing protein
[Arabidopsis thaliana]
Length = 507
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 167/399 (41%), Gaps = 64/399 (16%)
Query: 212 VLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLP 271
V+ ++ + LGL+ I ++ P +L V + VL L+++G +G ++
Sbjct: 111 VMCERVEFLQKLGLT----IDDINEYPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFVK 166
Query: 272 GKGSYNWDQV---------SETLDFLYKIGYNEVQLLNLFKTNPALV---FEGSGQKVYV 319
N+ QV + + FL + + L + P L+ EG+ +
Sbjct: 167 -----NYPQVLHASVVVELAPVVKFLRGLDVEKQDLGYVLMKYPELLGFKLEGT---MST 218
Query: 320 LFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAE 379
L+ +G+ ++ + +Q P +L + + V +LI IG+ K ++ M+ +
Sbjct: 219 SVAYLVSIGVSPRDIGPMVTQYPYLLGMRVGTMIKPLVDYLISIGLPKKIVARMLEKRSY 278
Query: 380 LMG---SCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDE-------QV 429
++G ++K V +E L +I P ++ L K ++ + ++
Sbjct: 279 IVGYNLEETVKPNVDCLISFGVKKELLPLLIAQYP-QILGLPVKAKMSTQQYFFSLKLKI 337
Query: 430 DCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRN 489
D + ++ VEK ++ L + K ++ GR Q+++ +
Sbjct: 338 DPEGFARVVEKMPQIVSL----KQNVIMKPIEFLLGRAFQVED--------------IAK 379
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
+V R P +L ++++ + K + P++ +V +P Y Y + RI R Y L+
Sbjct: 380 MVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPR---YQKLQ 436
Query: 549 ERGVAKPTLSLSTILACSDAKFEKY----FVDVHPEGPA 583
+G+ SL+ L CSD +FE+ F+D EGP
Sbjct: 437 SKGIRS---SLNWFLNCSDQRFEERLQGNFIDPDTEGPT 472
>gi|356526741|ref|XP_003531975.1| PREDICTED: uncharacterized protein LOC100792255 [Glycine max]
Length = 400
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 469 QLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPA 528
+ + RF+ + G + + V++ P V+ S++V KK+ +L + +P E + +P
Sbjct: 269 RWESRFEVYERCGWNREIALRAVRKFPSVVKLSEEVFIKKMSFLVKDMGWPSEDIAEYPQ 328
Query: 529 YLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV-----DVHPEGP 582
+ Y++ RI R + L+ +G+ K L S I+ ++AKF K FV D+ P P
Sbjct: 329 VVTYNLEKRIIPRFSVIKMLKSKGLLKNNLHFSGIICITEAKFLKKFVISFQKDL-PFLP 387
Query: 583 AMWESLKKSSN 593
+ SL N
Sbjct: 388 DFYNSLANQQN 398
>gi|15236230|ref|NP_192208.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|3924606|gb|AAC79107.1| hypothetical protein [Arabidopsis thaliana]
gi|7269784|emb|CAB77784.1| hypothetical protein [Arabidopsis thaliana]
gi|332656857|gb|AEE82257.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 541
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 144/348 (41%), Gaps = 34/348 (9%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L +LG + I Y G + LD+L K+G + + P ++
Sbjct: 151 VEFLHKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTEFLRRYPQVLHSS 210
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
+ + L L +K ++V + + P++L K + +V +L+ IG+ ++I
Sbjct: 211 VVIDLAPVVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGG 270
Query: 373 MVLMHAELMGSCSLKGPKTVCSKLKV---GRESLCQIIKDDPLKL-FHL--ASKTEVKID 426
++ + E++G + K + L+V R + ++I+ P L F L K V+I
Sbjct: 271 ILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQIL 330
Query: 427 EQVDCQN---PSKDVEKTEF--------------LLRLGYVENSEEV---TKALKQFRGR 466
+ + + PS + E LL N E++ + + QF
Sbjct: 331 QDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSL 390
Query: 467 GDQ-LQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVA 525
+ + + D L + G + R +V P VL + +++ +Y + + PL+ +V
Sbjct: 391 SESPMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVD 450
Query: 526 FPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
FPA+ Y + + R K + SL+ +L CSD KFE+
Sbjct: 451 FPAFFTYGLESTVKPRHKKIIKKGI------KCSLAWMLNCSDEKFEQ 492
>gi|15220717|ref|NP_176406.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|26452931|dbj|BAC43542.1| unknown protein [Arabidopsis thaliana]
gi|28973555|gb|AAO64102.1| unknown protein [Arabidopsis thaliana]
gi|332195806|gb|AEE33927.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 463
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 438 VEKTEFLLRLGYVENSEEVTKALKQ----FRGRGDQLQERFDCLVQAGLDSNVVRNIVKR 493
++ E L R G E+ EV K+ R Q+ + + G + +VK
Sbjct: 301 IQTFEALKRCGLCED--EVLSVFKKNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVKC 358
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGV 552
P + S ++++KK +++ + +PL+ + FP L Y M R RC + L +G+
Sbjct: 359 LPQCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMSKGL 418
Query: 553 AKPTL-SLSTILACSDAKFEKYFVDVHPE 580
L ++++LAC+D F K +V H E
Sbjct: 419 LGSELPPMASVLACTDQTFLKRYVVEHDE 447
>gi|297840333|ref|XP_002888048.1| hypothetical protein ARALYDRAFT_893289 [Arabidopsis lyrata subsp.
lyrata]
gi|297333889|gb|EFH64307.1| hypothetical protein ARALYDRAFT_893289 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 436 KDVEKTEFLLRLGYVENSEEVTKALKQF----RGRGDQLQERFDCLVQAGLDSNVVRNIV 491
K + E L G EN EV + LK++ R ++ + + G + I+
Sbjct: 194 KITQTIETLKMCGLDEN--EVLQVLKKYPQFIRISEQKILSLIETFLGVGFSRDECVMII 251
Query: 492 KRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRER 550
K PM S + ++KK ++L + +PL+SVV+ PA L Y + RI RC + L +
Sbjct: 252 KGFPMCFGLSAETVKKKTEFLVKKMNWPLKSVVSNPAGLGYSLQKRIVPRCNVIKALMSK 311
Query: 551 GVAKPTL-SLSTILACSDAKF 570
G L S++++LAC+D F
Sbjct: 312 GSLGSELPSVASVLACTDQAF 332
>gi|2160140|gb|AAB60762.1| F19K23.9 gene product [Arabidopsis thaliana]
Length = 448
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 438 VEKTEFLLRLGYVENSEEVTKALKQ----FRGRGDQLQERFDCLVQAGLDSNVVRNIVKR 493
++ E L R G E+ EV K+ R Q+ + + G + +VK
Sbjct: 286 IQTFEALKRCGLCED--EVLSVFKKNPLCLRASEQQILNSMETFIGLGFSRDEFVMMVKC 343
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGV 552
P + S ++++KK +++ + +PL+ + FP L Y M R RC + L +G+
Sbjct: 344 LPQCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPRCNVIKALMSKGL 403
Query: 553 AKPTL-SLSTILACSDAKFEKYFVDVHPE 580
L ++++LAC+D F K +V H E
Sbjct: 404 LGSELPPMASVLACTDQTFLKRYVVEHDE 432
>gi|356507548|ref|XP_003522526.1| PREDICTED: uncharacterized protein LOC100799904 [Glycine max]
Length = 498
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 440 KTEFLLRLGYVENSEEVTKALKQ-FRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVL 498
K L+++GY S+++ A++ R +Q+ + G + + K+ P +L
Sbjct: 362 KLVLLVKIGYRYRSKDLAMAIRSATRTNCGNMQKVISLFLNYGFSCEDIVAMSKKQPQIL 421
Query: 499 NQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTL 557
+ LEKK++YL + +E ++ FPA+L Y + RI HR ++ +R RG +
Sbjct: 422 QYNHTSLEKKMEYLIEEMGRDIEELLLFPAFLGYKLDDRIKHRFEVKKLVRGRG-----M 476
Query: 558 SLSTILACSDAKF 570
S++ +L S+ F
Sbjct: 477 SINKLLTVSEETF 489
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 231 IKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKN-DWIGRYL---PGKGSYNWDQVSETLD 286
I L+ P +L +D++ V ++ L EL + D +G+ L P +Y+ V E +
Sbjct: 232 IALILKRPQILNHDLDTQIVPRVKFLMELSDGDEDSVGKVLLRFPIFLNYSVAHVEEHVG 291
Query: 287 FLYKIG-YNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQIL 345
FL ++ Q+ + + PA+V +K+ L + GL +E++ + P L
Sbjct: 292 FLSSFAEFDYKQIFRIIQVYPAIVTTSRERKLRPRIQFLKECGLDSDEIFKFLIKGPTFL 351
Query: 346 SSKFVKNLLQAVGFLIEIG 364
S F +N+ + L++IG
Sbjct: 352 SISFNENIAYKLVLLVKIG 370
>gi|449525524|ref|XP_004169767.1| PREDICTED: uncharacterized LOC101220316 [Cucumis sativus]
Length = 659
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 156/363 (42%), Gaps = 46/363 (12%)
Query: 251 KVLEKLKELGFKNDWIGRYLPGKGS----YNWDQVSETLDFLYKIGYNEVQLLNLFKTNP 306
+++E LK + K ++G L G + +++ E +D+L G V + + P
Sbjct: 267 RLVEWLKGIHVKGGYLGLTLTKAGGNILERSNEELDEIVDYLESNGVRMVWMGFVISRCP 326
Query: 307 ALV-FEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGM 365
L+ + K V F L +G+ + ++ P++L +++ Q V +L E G+
Sbjct: 327 YLLSYNMEELKTRVEF--FLNMGMNDKDFGTMVFDFPKVLGQYTFEDMNQKVNYLKEFGL 384
Query: 366 GMKDISNMVLMHAELMGSCSLKGPKTVCSK----LKVGRESLCQIIKDDPLKLFHL---- 417
+D+ ++ +LM +CS++ K L + ++ L +++ P+ +F L
Sbjct: 385 ENEDVGKLLAYKPQLM-NCSIEDKWKPLVKYFYYLGISKDGLKRMLTIKPV-VFCLDLET 442
Query: 418 --ASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEV-----TKALKQFRGRGDQL 470
K + D V S + K LL + V TKA + + G +
Sbjct: 443 IIVPKVQFFKDVGVRDDGISNMLVKFPSLLTFSLYKKIRPVVIFLMTKAGVREKDVGKVI 502
Query: 471 Q---ERFDCLVQAGLDSNV---------VRNI---VKRAPMVLNQSKDVLEKKIDYLKNY 515
E F + L+ N+ RN+ + PM+L + D+L K YL+
Sbjct: 503 ALGPELFGYSIVHKLEVNLKYYLSLGIYTRNLGEMITDFPMLLRYNIDILRPKYQYLRRT 562
Query: 516 LCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYF 574
+ PL+ ++ FP + Y + GRI R ++ V R ++L ++LAC+D +F+
Sbjct: 563 MVRPLQDLIDFPRFFSYSLEGRIIPRHQVLVENRI------NINLRSMLACTDEEFKNKV 616
Query: 575 VDV 577
D+
Sbjct: 617 ADI 619
>gi|168005656|ref|XP_001755526.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693233|gb|EDQ79586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 18/253 (7%)
Query: 324 LLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGS 383
LL LG+ +V + ++PQIL+ + +L LIE G+ ++ I V+ L G+
Sbjct: 325 LLSLGITKEQVGKIIDRHPQILTYNMEQRVLPMHRKLIECGLKIEGIGKAVMKFPGLFGT 384
Query: 384 CSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEF 443
K +T+ G + + I P L + +D +V K+E
Sbjct: 385 GINKIDRTIEFLKAAGVVEIAKCISRHPQIL-------SLSLDGKVHNMTA---FLKSEL 434
Query: 444 LLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKD 503
LL + + + + + ++ + ++ GL+ V ++ P ++ S +
Sbjct: 435 LLEPEIINKTIAIQPCIFTHSVEHN-VRPKVMYFLRLGLERREVGRMIAVYPALIGHSLE 493
Query: 504 V-LEKKIDYLKNYLCYPLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPTLSLST 561
++ KID+L N + + +V+FP YL Y + RI R Y +L RG + +SLS+
Sbjct: 494 TSIKPKIDFLLNVMNRSVNEIVSFPQYLSYSLPCRIQPR---YEYLANRG--RNDISLSS 548
Query: 562 ILACSDAKFEKYF 574
+L C F K +
Sbjct: 549 MLTCRLDIFNKRY 561
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 6/173 (3%)
Query: 214 ASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL--- 270
AS+ +LG++K V K++ P +L ++ R + + KL E G K + IG+ +
Sbjct: 319 ASEALYLLSLGITKEQVGKIIDRHPQILTYNMEQRVLPMHRKLIECGLKIEGIGKAVMKF 378
Query: 271 PGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRL-LKLGL 329
PG +++ T++FL G V++ +P ++ KV+ + L +L L
Sbjct: 379 PGLFGTGINKIDRTIEFLKAAGV--VEIAKCISRHPQILSLSLDGKVHNMTAFLKSELLL 436
Query: 330 KMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMG 382
+ + + P I + N+ V + + +G+ +++ M+ ++ L+G
Sbjct: 437 EPEIINKTIAIQPCIFTHSVEHNVRPKVMYFLRLGLERREVGRMIAVYPALIG 489
>gi|449465409|ref|XP_004150420.1| PREDICTED: uncharacterized protein LOC101220316 [Cucumis sativus]
Length = 659
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 156/363 (42%), Gaps = 46/363 (12%)
Query: 251 KVLEKLKELGFKNDWIGRYLPGKGS----YNWDQVSETLDFLYKIGYNEVQLLNLFKTNP 306
+++E LK + K ++G L G + +++ E +D+L G V + + P
Sbjct: 267 RLVEWLKGIHVKGGYLGLTLTKAGGNILERSNEELDEIVDYLESNGVRMVWMGFVISRCP 326
Query: 307 ALV-FEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGM 365
L+ + K V F L +G+ + ++ P++L +++ Q V +L E G+
Sbjct: 327 YLLSYNMEELKTRVEF--FLNMGMNDKDFGTMVFDFPKVLGQYTFEDMNQKVNYLKEFGL 384
Query: 366 GMKDISNMVLMHAELMGSCSLKGPKTVCSK----LKVGRESLCQIIKDDPLKLFHL---- 417
+D+ ++ +LM +CS++ K L + ++ L +++ P+ +F L
Sbjct: 385 ENEDVGKLLAYKPQLM-NCSIEDKWKPLVKYFYYLGISKDGLKRMLTIKPV-VFCLDLET 442
Query: 418 --ASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEV-----TKALKQFRGRGDQL 470
K + D V S + K LL + V TKA + + G +
Sbjct: 443 IIVPKVQFFKDVGVRDDGISNMLVKFPSLLTFSLYKKIRPVVIFLMTKAGVREKDVGKVI 502
Query: 471 Q---ERFDCLVQAGLDSNV---------VRNI---VKRAPMVLNQSKDVLEKKIDYLKNY 515
E F + L+ N+ RN+ + PM+L + D+L K YL+
Sbjct: 503 ALGPELFGYSIVHKLEVNLKYYLSLGIYTRNLGEMITDFPMLLRYNIDILRPKYQYLRRT 562
Query: 516 LCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYF 574
+ PL+ ++ FP + Y + GRI R ++ V R ++L ++LAC+D +F+
Sbjct: 563 MVRPLQDLIDFPRFFSYSLEGRIIPRHQVLVENRI------NINLRSMLACTDEEFKNKV 616
Query: 575 VDV 577
D+
Sbjct: 617 ADI 619
>gi|42571957|ref|NP_974069.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|2160136|gb|AAB60758.1| F19K23.4 gene product [Arabidopsis thaliana]
gi|332195802|gb|AEE33923.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 461
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 435 SKDVEKTEFLLRLGYVENSEEVTKALKQF----RGRGDQLQERFDCLVQAGLDSNVVRNI 490
+K V+ E L + G +E+ +V LK+F ++ + + G + V I
Sbjct: 295 NKIVQTWETLKKCGLLED--DVLSVLKKFPQCINASEQKIMNSIETFLGLGFSRDEVAMI 352
Query: 491 VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRE 549
KR P L S + ++KK ++L + +PL++VV+ PA L Y + R RC + L
Sbjct: 353 AKRFPQCLILSAETVKKKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMS 412
Query: 550 RGVAKPTL-SLSTILACSDAKFEKYFVDVH 578
+G L +S++L C++ +F +V H
Sbjct: 413 KGSLGSELPGMSSVLVCTNEEFLCRYVKNH 442
>gi|168022800|ref|XP_001763927.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684932|gb|EDQ71331.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 270
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 123/275 (44%), Gaps = 31/275 (11%)
Query: 329 LKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSC--SL 386
++ +V L + ++L + + V +LI +G+ +I ++L +L+G L
Sbjct: 12 MRSRDVPRLVKRYAEVLVLDPERKMAPMVNYLISLGVQRDNIGKVILKRPQLLGYTIPGL 71
Query: 387 KGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVD-----CQNPSKDVEKT 441
+ +L V ESL +++ P L E K+ V+ N +D+E
Sbjct: 72 QPTVQYLIELGVKPESLGKVVSTSPQ---VLTLNVEEKLKPVVEFFRSMGLNKERDIE-- 126
Query: 442 EFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS 501
+ V N++ + ++++ L+ +F GL N + +++ P +L QS
Sbjct: 127 -----MLLVRNAQILCCSIEK------NLRPKFLFFKGLGLTENSIADMIVLFPSMLGQS 175
Query: 502 -KDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPTLSL 559
+ L K +YL + + P+E +V FP Y Y + RI R ++ L+ + + T SL
Sbjct: 176 IEGSLAPKFNYLIHEMNRPIEELVEFPQYFGYSLERRIKPRHEL---LKGKAI---TTSL 229
Query: 560 STILACSDAKFEKYFVDVHPEGPAMWESLKKSSNS 594
+++LAC + F+ ++ P A + K+ S
Sbjct: 230 ASMLACVEDDFKARYLSGQPPSRAPYNKRVKTDRS 264
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 230 VIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYNWDQVSETLD 286
V +LV +L+ + + ++ L LG + D IG+ + P Y + T+
Sbjct: 17 VPRLVKRYAEVLVLDPERKMAPMVNYLISLGVQRDNIGKVILKRPQLLGYTIPGLQPTVQ 76
Query: 287 FLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGL-KMNEVYSLFSQNPQIL 345
+L ++G L + T+P ++ +K+ + +GL K ++ L +N QIL
Sbjct: 77 YLIELGVKPESLGKVVSTSPQVLTLNVEEKLKPVVEFFRSMGLNKERDIEMLLVRNAQIL 136
Query: 346 SSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKG 388
KNL F +G+ I++M+++ ++G S++G
Sbjct: 137 CCSIEKNLRPKFLFFKGLGLTENSIADMIVLFPSMLGQ-SIEG 178
>gi|449435926|ref|XP_004135745.1| PREDICTED: uncharacterized protein LOC101219782 [Cucumis sativus]
gi|449515947|ref|XP_004165009.1| PREDICTED: uncharacterized protein LOC101227222 [Cucumis sativus]
Length = 453
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 125/303 (41%), Gaps = 52/303 (17%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
+D L + G ++ ++ + + P +VF +++ L+ +G++ +E+ + P+
Sbjct: 156 AVDLLKRFGISDAAVIRVLEDYPEIVFTNE-EEILRTIEFLMGIGIRRDEIDRVICSIPR 214
Query: 344 ILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESL 403
+L + L + +G I+ ++ + P+T+ ++L G S
Sbjct: 215 VLGFRVEGRLRSLICEFNGLGFDQNVIAREIV-----------REPRTLATEL--GEISR 261
Query: 404 CQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQF 463
C V++ + C+N K E + R G + EV
Sbjct: 262 C------------------VELLRNLKCRNSIK-----ERIFREGSFRAAFEV------- 291
Query: 464 RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESV 523
++R DCL + GL ++ + P ++ + +EKKID+L + + + ++S+
Sbjct: 292 -------KQRVDCLCKHGLIRTRAFKLLWKEPRLVTYEIENIEKKIDFLIHKMKFGVDSL 344
Query: 524 VAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGP 582
+ P YL + + I R + +L +G + L I+ S +F FV +P+
Sbjct: 345 IDVPEYLGINFEKQIVPRYNVIEYLDSKGWLGSQVGLREIIKPSRLRFYNLFVKPYPQCG 404
Query: 583 AMW 585
M+
Sbjct: 405 KMF 407
>gi|255536843|ref|XP_002509488.1| conserved hypothetical protein [Ricinus communis]
gi|223549387|gb|EEF50875.1| conserved hypothetical protein [Ricinus communis]
Length = 643
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 144/342 (42%), Gaps = 42/342 (12%)
Query: 246 DSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYNWDQVSETLDFLYKIGYNEVQLLNLF 302
D +++E L+ G + DW+G + P SY+ +QV + F +G NE L +
Sbjct: 281 DEELSEIVEYLESNGVRRDWMGYVMSRCPQLLSYSLEQVKTRVRFYLDMGMNEKDLGTMV 340
Query: 303 KTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIE 362
P ++ + +++ L + GL +V L + P+++ + V +L
Sbjct: 341 FDCPRVLGYFTLKEMNQKVNYLKEFGLNNEDVGRLLAFKPELMCCSIEERWKPLVKYLYY 400
Query: 363 IGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLK----VG-RESLC--QIIKDDPLKLF 415
+G+ +D +L ++ L+ +T+ K++ +G RE ++K PL +
Sbjct: 401 LGIS-RDGMRRILTIKPMIFCVDLE--QTIVPKVRFFKDIGVREDAVGNMLVKFPPLLTY 457
Query: 416 HLASKTE-VKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERF 474
L K V I +D+ K ++ LG E+ G + +
Sbjct: 458 SLYKKIRPVVIFLMTKAGVSERDIGK---VIALG-----PELL---------GCSIAHKL 500
Query: 475 DCLVQAGLDSNVVR----NIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYL 530
D V+ L + R ++ PM+L S D+L K YL+ + PL+ ++ FP +
Sbjct: 501 DLSVKYYLSLGIGRRQLGEMIADFPMLLRYSIDLLRPKYRYLRRTMVRPLQDLIEFPRFF 560
Query: 531 CYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFE 571
Y + GRI R K+ V E V L +L SD +F+
Sbjct: 561 SYSLDGRIIPRHKILV---ENQV---NFKLRYMLGSSDVEFQ 596
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 100/238 (42%), Gaps = 7/238 (2%)
Query: 144 INEFEPFFESLGLSQSELSPLLPRHLMFLSDD-EVLLDNFHVLCDYGIPRSKMGKMYVEA 202
++E + ES G+ + + ++ R LS E + D G+ +G M +
Sbjct: 284 LSEIVEYLESNGVRRDWMGYVMSRCPQLLSYSLEQVKTRVRFYLDMGMNEKDLGTMVFDC 343
Query: 203 TEIFRH-DRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGF 261
+ + + K+ + GL+ V +L++ P L+ ++ R+ +++ L LG
Sbjct: 344 PRVLGYFTLKEMNQKVNYLKEFGLNNEDVGRLLAFKPELMCCSIEERWKPLVKYLYYLGI 403
Query: 262 KNDWIGRYLPGKGSYNWDQVSETL----DFLYKIGYNEVQLLNLFKTNPALVFEGSGQKV 317
D + R L K + +T+ F IG E + N+ P L+ +K+
Sbjct: 404 SRDGMRRILTIKPMIFCVDLEQTIVPKVRFFKDIGVREDAVGNMLVKFPPLLTYSLYKKI 463
Query: 318 Y-VLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMV 374
V+ + K G+ ++ + + P++L L +V + + +G+G + + M+
Sbjct: 464 RPVVIFLMTKAGVSERDIGKVIALGPELLGCSIAHKLDLSVKYYLSLGIGRRQLGEMI 521
>gi|449489513|ref|XP_004158334.1| PREDICTED: uncharacterized protein LOC101224846 [Cucumis sativus]
Length = 516
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 144/350 (41%), Gaps = 38/350 (10%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L++LG D I + G + L +L KIG +L K P ++
Sbjct: 126 VEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQVLHAS 185
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
++ + L L ++ ++ + + P++L K + +V +L+ IG+ +DI
Sbjct: 186 VIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGP 245
Query: 373 MVLMHAELMGS-------------CSLKGPKTVCSKLKVGRE-----SLCQIIKDDPLKL 414
MV + +G SL PK + +++ R L + +K + L
Sbjct: 246 MVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKPNIDCL 305
Query: 415 FHLASKTEVKIDEQVDCQNP-------SKDVEKTEFL----LRLGYVENSEEVTKALKQF 463
+ E+ V Q P + +F L++ ++ + K +
Sbjct: 306 LSFGIRKELL--PSVIAQYPLILGLPLKAKLSSQQFFFDLKLKIDPAGFAQVIEKMPQMV 363
Query: 464 RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESV 523
+ + + L++ G+ S+ V ++ + P +L +++ + K+ + P++ +
Sbjct: 364 SLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPIKEL 423
Query: 524 VAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
V FP Y Y + RI R Y L+ +G+ + SL+ L CSD +FE+
Sbjct: 424 VDFPEYFTYSLESRIKPR---YQRLQSKGI---SCSLNWFLNCSDQRFEE 467
>gi|449446744|ref|XP_004141131.1| PREDICTED: uncharacterized protein LOC101203314 [Cucumis sativus]
Length = 516
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 144/350 (41%), Gaps = 38/350 (10%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
+E L++LG D I + G + L +L KIG +L K P ++
Sbjct: 126 VEFLQKLGLTIDDINEFPLILGCSVRKNMIPVLGYLEKIGIPRPKLGEFIKNYPQVLHAS 185
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISN 372
++ + L L ++ ++ + + P++L K + +V +L+ IG+ +DI
Sbjct: 186 VIVELAPVIKLLRGLDVEKEDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGP 245
Query: 373 MVLMHAELMGS-------------CSLKGPKTVCSKLKVGRE-----SLCQIIKDDPLKL 414
MV + +G SL PK + +++ R L + +K + L
Sbjct: 246 MVTQYPFFLGMRVGTMIKPLVEFIVSLGLPKKIVARMLEKRAYILGYDLGETVKPNIDCL 305
Query: 415 FHLASKTEVKIDEQVDCQNP-------SKDVEKTEFL----LRLGYVENSEEVTKALKQF 463
+ E+ V Q P + +F L++ ++ + K +
Sbjct: 306 LSFGIRKELL--PSVIAQYPLILGLPLKAKMSSQQFFFDLKLKIDPAGFAQVIEKMPQMV 363
Query: 464 RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESV 523
+ + + L++ G+ S+ V ++ + P +L +++ + K+ + P++ +
Sbjct: 364 SLHQHVIIKPAEFLLERGIASSDVAKMIVQCPQLLACRVPLMKNSYYFFKSDMGRPIKEL 423
Query: 524 VAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
V FP Y Y + RI R Y L+ +G+ + SL+ L CSD +FE+
Sbjct: 424 VDFPEYFTYSLESRIKPR---YQRLQSKGI---SCSLNWFLNCSDQRFEE 467
>gi|449452140|ref|XP_004143818.1| PREDICTED: uncharacterized protein LOC101216006 [Cucumis sativus]
Length = 524
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 132/318 (41%), Gaps = 40/318 (12%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
LD+L K+G + K P ++ + + L + +K N++ + + P+
Sbjct: 171 VLDYLGKLGVRKSTFTEFLKRYPQVLHSSVVVDLAPVIKYLQGMDIKPNDIPRVLERYPE 230
Query: 344 ILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLK---VGR 400
+L K + +V +L+ IG+ ++I ++ + E++G + K L+ + R
Sbjct: 231 VLGFKLEGTMSTSVAYLVGIGVTRREIGGVLTKYPEILGMRVARVIKPFVEYLEGLGIPR 290
Query: 401 ESLCQIIKDDPLKL-FHLASKTE--------------------------VKIDEQVDCQN 433
++ ++I+ P L F L K + + ID + + Q
Sbjct: 291 LAVARLIEKRPHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGIDLEANLQT 350
Query: 434 PSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKR 493
+++ K+ L+ L + K + + D L G V+N+V
Sbjct: 351 -QRNLLKS--LIELDNDNFGTIIEKMPQVVSLSRSAVINHVDFLKTCGFSLLQVKNMVIG 407
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGV 552
P +L + D+++ ++ + + PLE + FPA+ Y + I R + V ++G+
Sbjct: 408 CPQLLALNIDIMKHSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVV---QKGI 464
Query: 553 AKPTLSLSTILACSDAKF 570
+ SLS +L C+D KF
Sbjct: 465 S---CSLSWLLNCADEKF 479
>gi|449494471|ref|XP_002198762.2| PREDICTED: mTERF domain-containing protein 1, mitochondrial
[Taeniopygia guttata]
Length = 416
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 133/315 (42%), Gaps = 49/315 (15%)
Query: 277 NWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYV----LFGRLLKLGLKMN 332
+WD + + VQ++ P L + S + YV +L+ LG+ ++
Sbjct: 111 DWDDIPPSSALEVISEEEAVQII----AEPILPIQSSTLREYVDHSETLAKLVHLGVDLS 166
Query: 333 EVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTV 392
+V +L+ F K++ + + FL ++G+ + + + ++G L+ +T
Sbjct: 167 QVEKRQKAGQLLLTLDFEKDVKKKLLFLKDVGVEDNQLGPFLTKNPYILGE-DLEALETR 225
Query: 393 CSKLK---VGRESLCQIIKDDP-LKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLG 448
+ LK G+ + Q++ P L LF + E++D RLG
Sbjct: 226 VAYLKSKKFGKSEIAQMVSRAPYLLLFSV---------ERLDN--------------RLG 262
Query: 449 YVEN----SEEVTKAL-----KQFRGRGDQLQERFD-CLVQAGLDSNVVRNIVKRAPMVL 498
+ +N S + TK L + G+ + ++E C ++ G N ++ IV + P +L
Sbjct: 263 FFKNELGLSVKKTKDLVIRLPRLLTGKIEPVKENLQVCQIELGFQRNEIQQIVCKTPKIL 322
Query: 499 NQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWL--RERGVAKPT 556
SK L++ DYL N + P + FP + RI R +L + A+P+
Sbjct: 323 TASKKRLKQTFDYLHNIMGIPHHMLTRFPQVFNSKLLRIRERHMFLAFLGRAQYDPAQPS 382
Query: 557 -LSLSTILACSDAKF 570
+SL +++ D F
Sbjct: 383 YISLDQLVSLPDEVF 397
>gi|15237856|ref|NP_197781.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|10176860|dbj|BAB10066.1| unnamed protein product [Arabidopsis thaliana]
gi|332005852|gb|AED93235.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 457
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 438 VEKTEFLLRLGYVENSEEVTKALKQF----RGRGDQLQERFDCLVQAGLDSNVVRNIVKR 493
++K E L R+G + EEV +K++ +++ + ++ G + V I+KR
Sbjct: 291 IQKFETLKRVGLTK--EEVCLVVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIKR 348
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGR-INHRCKMYVWLRERGV 552
P + + D ++KK ++L + +PL+ V + P L + + + + RC + L G+
Sbjct: 349 HPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGL 408
Query: 553 AKPTLSLSTILACSDAKFEKYFVDVH 578
++S++L KF K FV+ H
Sbjct: 409 IGEMPAISSVLTSPKLKFLKLFVEKH 434
>gi|116793310|gb|ABK26700.1| unknown [Picea sitchensis]
Length = 344
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 218 WAY-ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIG---RYLPGK 273
W Y + +G+ + +V CP LL+ G+ + ++E L LG K + P
Sbjct: 48 WNYLQKIGIPSRKLPSMVCRCPKLLVLGLYEKLQPMVECLGALGTKPKDVALAVMRFPHI 107
Query: 274 GSYNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALV---FEGSGQKVYVLFGRLLKLGL 329
S++ ++ + L FL +G E QL L NP L+ EG Q + F L GL
Sbjct: 108 LSHSVEEKLCPLLAFLQTVGVAEKQLGKLILVNPRLISYSIEGKLQPMVEFF---LSFGL 164
Query: 330 KMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELM 381
+ ++ L ++P ++ L + FL ++G+G KD+ + + ++
Sbjct: 165 RDGDLGKLLVRSPHVVGYSVEGRLKPTLEFLRKVGLGDKDLQRIAVHFPHIL 216
>gi|307104063|gb|EFN52319.1| hypothetical protein CHLNCDRAFT_139106 [Chlorella variabilis]
Length = 412
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 45/311 (14%)
Query: 287 FLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLK-----LGLKMNEVYSLFSQN 341
LY++G L ++ P + G V R LK +GL +E+ + ++
Sbjct: 93 LLYELGLRAADFQRLTESRPEIFQMG-----IVTMRRKLKYFQDTIGLSNSELTKVIAKF 147
Query: 342 PQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRE 401
P+IL K + + + FL G+ D++ V M A + + L+ T+ + R+
Sbjct: 148 PRILEYKSERTIRPRLEFLRRCGVEQDDLAK-VFMRAPM--AMELRVKDTLEPRAAFLRD 204
Query: 402 SLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKAL- 460
LC + L K V+ + + C + + +FLLR G + EEV +A+
Sbjct: 205 VLC--LSSGAL------GKLIVRHPQVLTCTEEMMRL-RVDFLLRQGL--SQEEVGRAVL 253
Query: 461 ---KQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDV-LEKKIDYLKNYL 516
+ + D +QER L GLD V + R P + + + + L K YL +Y+
Sbjct: 254 AHPQVLHYKIDSMQERLAYLQSIGLDQAQVAACIFRFPQLFSLNVEANLAPKWRYLVDYI 313
Query: 517 CYPLESVV---AFPAYLCYDM-GRINHRCKMYVWL----RERGVA-------KPTLSLST 561
P++ V ++PAY + R+ R + ++ + + RG + +P +S
Sbjct: 314 RAPVDGVATLCSYPAYFSLSLTNRVVPRHRYFLHVHSQRQPRGGSNSAASGTQPAFPMSA 373
Query: 562 ILACSDAKFEK 572
L CSD +F K
Sbjct: 374 -LKCSDTQFAK 383
>gi|297812539|ref|XP_002874153.1| hypothetical protein ARALYDRAFT_489254 [Arabidopsis lyrata subsp.
lyrata]
gi|297319990|gb|EFH50412.1| hypothetical protein ARALYDRAFT_489254 [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 149/360 (41%), Gaps = 83/360 (23%)
Query: 285 LDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQI 344
L L G+ + Q+ ++ T P + E + + L G +E+ + S+ P+I
Sbjct: 93 LKLLRSYGFKDCQISSIIATYPRFLVESPEKSLRAKLHFLKLNGASSSELTEIVSKVPKI 152
Query: 345 LSSK----------FVKNLLQ-----------------AVGFLIEIGMGMKDISNMVLMH 377
L + +VK +LQ V L E+G+ + + N+++
Sbjct: 153 LGKRGGKWIIHYYDYVKEILQDQDTSSSSKRKQTNRNRNVSVLRELGVPQRLLLNLLISR 212
Query: 378 AELMGSCSLKGPKTVCSKLKVGRESLCQIIKD--DP--------LKLFH-LASKTEVKID 426
A K VC K + ES+ +I++ DP L +F+ L+ KT I+
Sbjct: 213 A-----------KPVCGKERF-EESVKKIVEMGFDPKSPKFVSALYVFYDLSDKT---IE 257
Query: 427 EQVDCQ-----------------------NPSKDVEKTEFLLRLGYVENSEEVTKALKQF 463
E+V+ + K ++ E L R+G E EEV +K++
Sbjct: 258 EKVNAYKRLGLSLDEVWVVFKKWPFSLKYSEKKIIQTFETLKRVGLRE--EEVCLMVKRY 315
Query: 464 ----RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYP 519
+++ + + ++ G + I+KR P + + D ++KK ++L + +P
Sbjct: 316 PECVGTSEEKIVKSVETFLELGFTKDEFVMIIKRHPQCIGLAADSVKKKTEFLVKTMGWP 375
Query: 520 LESVVAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVH 578
L+ V + P L + + + + RC + L +G+ ++S++L KF K FV+ H
Sbjct: 376 LKVVASTPIVLGFSLEKFVLPRCNVIKALLSKGLIDEIPAISSVLTSPKLKFLKLFVEKH 435
>gi|224103411|ref|XP_002313046.1| predicted protein [Populus trichocarpa]
gi|222849454|gb|EEE87001.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 153/363 (42%), Gaps = 41/363 (11%)
Query: 243 GGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLD-FLYKIGYNEVQL--L 299
G VDS +V E LK + K +++G L G ++ E LD ++ + N V++ +
Sbjct: 103 GNVDS-IRRVTEWLKSIHVKGEFLGSVLTKAGENILERSIEELDEIVWYLESNGVRMDWM 161
Query: 300 NLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGF 359
+ + S ++V G L +G+ + ++ P++L ++ + Q V +
Sbjct: 162 GYVMSRCPQLLCCSMEEVKTRVGFFLDMGMNEKDFGTMVFDYPRVLGYFTLEEMNQKVNY 221
Query: 360 LIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSK----LKVGRESLCQIIKDDPLKLF 415
L E G+ +D+ ++ +LMG CS++ K L + R+ + +++ P+
Sbjct: 222 LKEFGLSNEDVGRLLAFKPQLMG-CSIEERWKPLVKYLYYLGISRDGMKRMLVIKPMVFC 280
Query: 416 HLASKT---EVKIDEQVDCQNPS-----------------KDVEKTEFLLRLGYVENSEE 455
+T +V+ + + ++ + K + L +
Sbjct: 281 VDLEQTIVPKVRFFQDIGIRDDAIGNMLVKFPPLLTYSLYKKIRPVVIFLMTKAGVSERN 340
Query: 456 VTKALK---QFRGRG--DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKID 510
+ KA+ + G ++L+ L+ G+ + ++ PM+L + D+L K
Sbjct: 341 IAKAIALGPELLGCSIVNKLEINLKYLLSLGIRHRQLGEMIADFPMLLRYNIDLLRPKYK 400
Query: 511 YLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAK 569
YL+ + PL+ ++ FP + Y + RI R K+ V R L +LA +D +
Sbjct: 401 YLRRTMVRPLQDLIEFPRFFSYSLDDRIIPRHKVLVENR------INFKLRYMLASTDEE 454
Query: 570 FEK 572
F+K
Sbjct: 455 FQK 457
>gi|359475176|ref|XP_003631610.1| PREDICTED: uncharacterized protein LOC100852464 [Vitis vinifera]
Length = 678
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 133/361 (36%), Gaps = 64/361 (17%)
Query: 221 ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGR----YLPGKGSY 276
EN G+ ++ + ++S CP LL ++ +V L ++G G Y G +
Sbjct: 303 ENNGVRRDWMGNVMSRCPQLLSYSIEEVKTRVGFYL-DMGMNEKDFGTMVFDYPKALGYF 361
Query: 277 NWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYS 336
++++E + +L + G N + L P L+ ++ L LG+ +
Sbjct: 362 TLEEMNEKVSYLKEFGLNNEDVGRLLAFKPQLMGCSIEERWKPFVKYLYYLGVCREGMRR 421
Query: 337 LFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVC--- 393
+ P + K ++ V F +IG+ I NM++ L+ K + V
Sbjct: 422 MLIIKPMVFCVDLEKTIVPKVRFFQDIGIRDDAIGNMLVKFPPLLTYSLYKKIRPVVIFL 481
Query: 394 -SKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVEN 452
+K V R+ + ++I P E + C K ++ L LG
Sbjct: 482 ITKAGVSRKDIAKVIALGP---------------ELLGCSIVHKLEVNVKYFLSLG---- 522
Query: 453 SEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYL 512
+ ++ ++ PM+L + DVL K YL
Sbjct: 523 -----------------------------IPLQILGEMIADFPMLLRYNIDVLRPKYRYL 553
Query: 513 KNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFE 571
+ + PL+ ++ FP + Y + RI R K V R L +LA SD +F
Sbjct: 554 RRTMVRPLKDLIEFPRFFSYSLDDRIIPRHKALVENRV------NFKLRYMLAISDEEFA 607
Query: 572 K 572
+
Sbjct: 608 R 608
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Query: 176 EVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVS 235
E L D L + G+ R MG + ++ + + +++ Y ++G+++ +V
Sbjct: 293 EELDDIVRYLENNGVRRDWMGNVMSRCPQLLSYSIEEVKTRVGFYLDMGMNEKDFGTMVF 352
Query: 236 CCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSET----LDFLYKI 291
P L + + LKE G N+ +GR L K + E + +LY +
Sbjct: 353 DYPKALGYFTLEEMNEKVSYLKEFGLNNEDVGRLLAFKPQLMGCSIEERWKPFVKYLYYL 412
Query: 292 GYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLK-LGLKMNEVYSLFSQNPQILSSKFV 350
G + + P +VF +K V R + +G++ + + ++ + P +L+
Sbjct: 413 GVCREGMRRMLIIKP-MVFCVDLEKTIVPKVRFFQDIGIRDDAIGNMLVKFPPLLTYSLY 471
Query: 351 KNLLQAVGFLI-EIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSK----LKVGRESLCQ 405
K + V FLI + G+ KDI+ ++ + EL+G CS+ V K L + + L +
Sbjct: 472 KKIRPVVIFLITKAGVSRKDIAKVIALGPELLG-CSIVHKLEVNVKYFLSLGIPLQILGE 530
Query: 406 IIKDDPLKL 414
+I D P+ L
Sbjct: 531 MIADFPMLL 539
>gi|57530636|ref|NP_001006348.1| mTERF domain-containing protein 1, mitochondrial precursor [Gallus
gallus]
gi|82081560|sp|Q5ZJC8.1|MTER1_CHICK RecName: Full=mTERF domain-containing protein 1, mitochondrial;
Flags: Precursor
gi|53133672|emb|CAG32165.1| hypothetical protein RCJMB04_19e6 [Gallus gallus]
Length = 405
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 53/317 (16%)
Query: 277 NWDQVSETLDFLYKIGYNE-VQLLNLFKTNPALVFEGSGQKVYV----LFGRLLKLGLKM 331
+WD V + L +I E V+++ +P L + S + YV +L+ LG+ +
Sbjct: 100 DWDDVPPS-SALEEISEEEAVKII----ADPLLPPQSSTLRDYVDHSETLTKLVHLGVDL 154
Query: 332 NEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKT 391
++V +L+ F K++ + + FL ++G+ + + + ++G L+ +T
Sbjct: 155 SQVEKRQKAGQLLLTLDFEKDITKILLFLKDVGIEDNQLGPFLTKNPYILGE-ELEALET 213
Query: 392 VCSKLK---VGRESLCQIIKDDP-LKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRL 447
+ LK G + Q++ P L LF + E++D RL
Sbjct: 214 RVAYLKSKKFGNAEITQMVSRAPYLLLFSV---------ERLDN--------------RL 250
Query: 448 GYVEN----SEEVTKAL-----KQFRGRGDQLQERFD-CLVQAGLDSNVVRNIVKRAPMV 497
G+ +N S + TK L + G+ + ++E C V+ G + N V+ I + P +
Sbjct: 251 GFFKNELGLSVKKTKDLVIRFPRLLTGKLEPVKENLQVCQVEFGFERNEVQQIAFKTPKI 310
Query: 498 LNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPT- 556
L SK L + DYL N + P + FP + RI R M++ R PT
Sbjct: 311 LTASKKRLRQTFDYLHNIMGIPHNMLTRFPQVFNSKLLRIKER-HMFLIFLGRAQYDPTK 369
Query: 557 ---LSLSTILACSDAKF 570
+SL +++ D F
Sbjct: 370 PSYISLDQLVSLPDEVF 386
>gi|224131208|ref|XP_002321027.1| predicted protein [Populus trichocarpa]
gi|222861800|gb|EEE99342.1| predicted protein [Populus trichocarpa]
Length = 400
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 125/315 (39%), Gaps = 46/315 (14%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
++ L L G++ Q+ +L K P L+ + L LG+ +
Sbjct: 91 ERPDSVLALLRNHGFSRTQISSLVKKRPFLLLSNPTNTLLPKLDFFLSLGMSRPHLARTL 150
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEI---------------GMGMKDISNMVLMHAELMGS 383
S +P +L+ ++ + FL I + ++D+S ++ + EL+
Sbjct: 151 SSDPTLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLR- 209
Query: 384 CSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEF 443
KVG C L L H + +N + E E
Sbjct: 210 -------------KVGVPQSCI-----SLLLTHFP---------EAMMENHEEFSENVEE 242
Query: 444 LLRLGYVENSEEVTKALKQFRGRGDQ-LQER-FDCLVQAGLDSNVVRNIVKRAPMVLNQS 501
+ ++G+ N A+ G+ ++ + ER F+ + G + + + ++ P + S
Sbjct: 243 VRKMGFDPNKSTFVLAVHALCGKCNKSIWERCFEVYKRWGWTKDDILSAFRKHPHCMMLS 302
Query: 502 KDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLS 560
+ + K +D+ N + +P + +V P L + RI RCK+ L +G+ K +SL+
Sbjct: 303 EKKIMKGLDFFVNKMGWPSKEIVHCPVILFLSLEKRIIPRCKVIQVLWSKGLIKKDISLN 362
Query: 561 TILACSDAKFEKYFV 575
T+L + +F + FV
Sbjct: 363 TVLLPVEKRFLERFV 377
>gi|147812728|emb|CAN74988.1| hypothetical protein VITISV_005102 [Vitis vinifera]
Length = 156
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 475 DCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM 534
D L G VR +V P +L + D+++ D+ + + PL+ +VAFPA+ Y +
Sbjct: 17 DFLKDCGFSLQQVRKMVVGCPQLLALNLDIMKFSFDFFQKEMERPLDDLVAFPAFFTYGL 76
Query: 535 GRINHRCKMYVWLRERGVAKPTL--SLSTILACSDAKFEK 572
+ R + VAK L SLS +L CSD KFE+
Sbjct: 77 EST-------IRPRHQMVAKKGLKCSLSWLLICSDEKFEE 109
>gi|449520591|ref|XP_004167317.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101225792 [Cucumis sativus]
Length = 524
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 133/316 (42%), Gaps = 36/316 (11%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
LD+L K+G + P ++ + + L + +K N++ + + P+
Sbjct: 171 VLDYLGKLGVRKSTFTEFLXRYPQVLHSSVVVDLAPVIKYLQGMDIKPNDIPRVLERYPE 230
Query: 344 ILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLK---VGR 400
+L K + +V +L+ IG+ ++I ++ + E++G + K L+ + R
Sbjct: 231 VLGFKLEGTMSTSVAYLVGIGVTRREIGGVLTKYPEILGMRVARVIKPFVEYLEGLGIPR 290
Query: 401 ESLCQIIKDDPLKL-FHLASKT--------EVKIDE-----------QVDCQNPSKDVEK 440
++ ++I+ P L F L K E K+ E ++ + +++
Sbjct: 291 LAVARLIEKRPHILGFGLEKKVKPNIQLLLEFKVREAYLPSIVAQYAEIIGMDLEANLQT 350
Query: 441 TEFLLRLGYVE----NSEEVTKALKQFRGRG-DQLQERFDCLVQAGLDSNVVRNIVKRAP 495
LL+ +E N + + + Q + D L G V+N+V P
Sbjct: 351 QRNLLK-SLIELDNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCP 409
Query: 496 MVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAK 554
+L + D+++ ++ + + PLE + FPA+ Y + I R + V ++G++
Sbjct: 410 QLLALNIDIMKHSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVV---QKGIS- 465
Query: 555 PTLSLSTILACSDAKF 570
SLS +L C+D KF
Sbjct: 466 --CSLSWLLNCADEKF 479
>gi|449284103|gb|EMC90684.1| mTERF domain-containing protein 1, mitochondrial [Columba livia]
Length = 411
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 130/306 (42%), Gaps = 31/306 (10%)
Query: 277 NWDQVSETLDFLYKIGYNE-VQLLNLFKTNPALVFEGSGQKVYV----LFGRLLKLGLKM 331
+WD V + L +I E V+++ P L S + YV +L+ LG+ +
Sbjct: 106 DWDDVPPS-SALEEISEEEAVKII----AEPLLPLHSSTLRDYVDHSETLAKLVHLGVDL 160
Query: 332 NEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKT 391
++V +L+ F K++ + + FL ++G+ + + + ++G L+ +T
Sbjct: 161 SQVEKRQKAGQLLLTLDFEKDIKKILLFLKDVGVEDNQLGPFLTKNPYILGE-DLEALET 219
Query: 392 VCSKLK---VGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLG 448
+ LK G + Q++ P L + + ++ K E L +
Sbjct: 220 RVAYLKSKKFGEAEIAQMVSRAPYLLLFSVERLDNRLG-----------FFKNELGLSVK 268
Query: 449 YVENSEEVTKALKQFRGRGDQLQERFD-CLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEK 507
++N V + + G+ + ++E C ++ G N ++ IV + P +L SK L++
Sbjct: 269 KIKNL--VIRFPRLLTGKLEPVKENLQVCQIELGFQRNEIQQIVFKTPKILTASKKRLKQ 326
Query: 508 KIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWL--RERGVAKPT-LSLSTILA 564
DYL N + P + FP + RI R +L + A+P+ +SL +++
Sbjct: 327 TFDYLHNIMGIPHHMLTRFPQVFNSKLLRIKERHMFLTFLGRAQYDPAQPSYISLDQLVS 386
Query: 565 CSDAKF 570
D F
Sbjct: 387 LPDEVF 392
>gi|148910232|gb|ABR18197.1| unknown [Picea sitchensis]
Length = 401
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Query: 431 CQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRG-DQLQERFDCLVQAGLDSNVVRN 489
C + K +E + LG + S+ A++ G G + + R CL G +
Sbjct: 222 CASEEKIMESFKQAEDLGVTKGSKAFAAAMRAVLGVGKETIDRRLQCLRSLGFSEKQILE 281
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
I + P+VL S+ L+ +D++ N L PL +V Y + R+ R ++ L+
Sbjct: 282 ISSKRPLVLGSSEVNLKHHVDFVVNSLGLPLADLVKHVTLFTYSVEKRMIPRYRVLEALK 341
Query: 549 ERGVAKPTLSLSTILACSDAKFEKYFVDVHPE 580
+ + +SL + S+ +F + V+ +PE
Sbjct: 342 SMKMPRTKMSLPNVFQLSEKRFLEKHVNSNPE 373
>gi|356524200|ref|XP_003530719.1| PREDICTED: uncharacterized protein LOC100775533 [Glycine max]
Length = 399
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 471 QERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYL 530
+ RF + G + + ++ P V+ S++ KK+++L N + +P E + +P +
Sbjct: 270 ESRFKVYERWGWNREMALQAFRKFPNVMRLSEEAFSKKMNFLVNDMGWPSEEIAEYPQVV 329
Query: 531 CYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
Y++ RI R + L+ +G+ + +S S+I+ ++ KF + FV
Sbjct: 330 AYNLEKRIIPRFSVIKILKSKGLLENNVSFSSIICITEEKFLENFV 375
>gi|224142903|ref|XP_002324772.1| predicted protein [Populus trichocarpa]
gi|222866206|gb|EEF03337.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/364 (18%), Positives = 141/364 (38%), Gaps = 54/364 (14%)
Query: 225 LSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSY--NWDQVS 282
+ +V+ L+ CP +L R+ L K +LG I L + + D+ +
Sbjct: 56 IPHKSVVSLIIDCPGVLDFDFLKRWEFGLSKFADLGVPPLLIKTVLEHSKKFQIDPDRFN 115
Query: 283 ETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNP 342
ETL L +G++E + + P ++ + ++ L+ +G+ + V +F+ P
Sbjct: 116 ETLKVLKGLGFSESTTRRVLEGFPGVIALKECE-IHRRIQFLMAIGIPRDGVDRVFNSFP 174
Query: 343 QILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRES 402
++L L+ + ++G + + ++ ++G ++VG S
Sbjct: 175 EVLGFGIENRLMPLLNEFKDLGFSEELVRKEIIREPRILG-------------MEVGELS 221
Query: 403 LCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQ 462
C + + + C+ P K ++ R G+
Sbjct: 222 RC------------------LDLIRSLKCREPIKLKIFSKGAFRAGF------------- 250
Query: 463 FRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLES 522
+++ R DCL + L I+ + P V+ D +EKKID++ + +
Sbjct: 251 ------EVKLRVDCLCKHRLIRREAFKILWKEPRVILYEIDDIEKKIDFIVKTVGLNVGC 304
Query: 523 VVAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEG 581
+V P YL + + R K+ +LR +G + L ++ S +F +V +PE
Sbjct: 305 LVDVPEYLGVSFEKQVVPRYKVIEYLRAKGGLGNEVGLKAMIKLSRLRFYNLYVKPYPEC 364
Query: 582 PAMW 585
M+
Sbjct: 365 EKMF 368
>gi|297815876|ref|XP_002875821.1| hypothetical protein ARALYDRAFT_485072 [Arabidopsis lyrata subsp.
lyrata]
gi|297321659|gb|EFH52080.1| hypothetical protein ARALYDRAFT_485072 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 470 LQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAY 529
+ + + + G + + +VKR P + + + KK + L + +PLE VV PA
Sbjct: 306 ISDSIETFLDLGFSRDEFKMMVKRYPQCTAYTAETVRKKFEVLVKKMNWPLEDVVLIPAV 365
Query: 530 LCYDM-GRINHRCKMYVWLRERG-VAKPTLSLSTILACSDAKFEKYFVDVH 578
L Y + RI R + L +G + +S++L C+D +F K +V H
Sbjct: 366 LGYSLEKRIVPRTNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRYVMKH 416
>gi|302757081|ref|XP_002961964.1| hypothetical protein SELMODRAFT_403419 [Selaginella moellendorffii]
gi|300170623|gb|EFJ37224.1| hypothetical protein SELMODRAFT_403419 [Selaginella moellendorffii]
Length = 503
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 136/332 (40%), Gaps = 45/332 (13%)
Query: 261 FKND---WIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKV 317
FK D WI + P + + + ET +FL + +E + + P ++ + +
Sbjct: 168 FKVDLSKWIVQMRPS----DKETLEETTNFLLEQAGSEKAFCKVVQCVPMVLQYDVEKHL 223
Query: 318 YVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIE-IGMGMKDISNMVLM 376
+ LG ++ + Q P+IL+ + L VG+L E +G ++ +
Sbjct: 224 QPRITTMESLGFSREQITKIIYQFPKILTVT-PERLTAVVGYLTEELGFSSDQACRVITI 282
Query: 377 HAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSK 436
P+ SKLKV + D + L SK + + +NPS
Sbjct: 283 F-----------PRFSTSKLKVISGKV-----DYFVSLGMQRSKVRLMLR-----KNPSM 321
Query: 437 ---DVE-----KTEFLLRLGYVENSEEVTKALKQFRG---RGDQLQE-RFDCLVQAGLDS 484
++E K EFL L + +++ L G R Q E R + L++ GL
Sbjct: 322 VGLNIERGVKPKLEFLASLDF--KGDDLDYLLSAHSGVLTRNSQAMEGRLNLLLRHGLSR 379
Query: 485 NVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKM 543
+ ++++ P + N ++L KK+ Y + PL S+ F +YL + M ++ R
Sbjct: 380 DECSLLLRKKPSIFNLGDELLSKKLAYYTRVMKQPLSSLCHFSSYLTFSMEAKVVPRTTF 439
Query: 544 YVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
WL G+A+ S ++ S +F + F+
Sbjct: 440 QHWLYMSGLARKEFSQPYMIMLSSERFTRRFL 471
>gi|297837169|ref|XP_002886466.1| hypothetical protein ARALYDRAFT_893233 [Arabidopsis lyrata subsp.
lyrata]
gi|297332307|gb|EFH62725.1| hypothetical protein ARALYDRAFT_893233 [Arabidopsis lyrata subsp.
lyrata]
Length = 473
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 452 NSEEVTKALKQF----RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEK 507
N EV + LK++ R ++ + + G + IVK PM S + ++K
Sbjct: 308 NENEVLQVLKKYPQFIRMSQQKILNFIETFLSLGFSRDEFTMIVKCFPMCFGLSGETVKK 367
Query: 508 KIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTL-SLSTILAC 565
K +++ + L+ +FP Y + RI RC + L RG+ L S++++LAC
Sbjct: 368 KTEFVVKKTNWSLKDTTSFPQVFGYSLEKRIVPRCNVIKALMSRGLLGSELPSMASVLAC 427
Query: 566 SDAKFEKYFV 575
+D F K +V
Sbjct: 428 NDHAFVKRYV 437
>gi|224132612|ref|XP_002321365.1| predicted protein [Populus trichocarpa]
gi|222868361|gb|EEF05492.1| predicted protein [Populus trichocarpa]
Length = 517
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Query: 438 VEKTEFLLRLGYVENSEEVTKAL-KQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPM 496
V K L+++GY ++E+ A+ R + LQ + GL + + K+ P
Sbjct: 366 VHKLVVLVKIGYENETKELAAAMGAASRTSCENLQNVIGLFLSYGLTYADILAMSKKHPQ 425
Query: 497 VLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKP 555
+L LE+K+++L + + +++FPA+L Y++ RI HR ++ G
Sbjct: 426 ILQYKCGALEEKLEFLIEEMGRGVRELLSFPAFLGYNLDERIKHRYEVKKLTTGEG---- 481
Query: 556 TLSLSTILACSDAKF 570
+S++ +L+ SD +F
Sbjct: 482 -MSINKLLSVSDDRF 495
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 225 LSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKEL-GFKNDWIG---RYLPGKGSYNWDQ 280
LS+ + L+ P +L +D++ + +E LKE+ G D G LP SY+
Sbjct: 232 LSRFGGVDLIVRRPMILNFDLDTQLIPRVELLKEISGGDEDATGIVLHKLPAILSYSVKH 291
Query: 281 VSETLDFLYKI-GYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFS 339
++ L G + Q+ +F P +V +K+ L + GL +E++ +
Sbjct: 292 TGGHVELLRSFAGLTDPQIFKIFSVFPNVVSASKERKLRPRIEFLKQCGLSSDEIFKFLT 351
Query: 340 QNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLK 397
+ P L F NL+ + L++IG N A MG+ S +T C L+
Sbjct: 352 KAPVFLGLSFEDNLVHKLVVLVKIGY-----ENETKELAAAMGAAS----RTSCENLQ 400
>gi|195614866|gb|ACG29263.1| mTERF family protein [Zea mays]
Length = 489
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 141/382 (36%), Gaps = 75/382 (19%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
L+ L LG D + Y V L +L K+G +L + PA +
Sbjct: 98 LDFLLRLGLSTDDLSNYPLLLACSLRKNVIPVLSYLEKLGVTRARLAAFVRAYPACLHAS 157
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEI-GMGMKDIS 371
+ + L L + ++ + + P +L K + +V +L+ I G+ +DI
Sbjct: 158 VAVDLAPMVKALRGLDVDRQDLPRVLERYPDVLGLKPDGTISTSVAYLVGIVGVAPRDIG 217
Query: 372 NMVLMHAELMGS-------------CSLKGPKTVCSKL---------------------- 396
MV +G SL P + +++
Sbjct: 218 PMVTHFPFFLGMRVGTTIKPFCDYITSLGLPMRILARILEKRPYILGYDLEETVKPNVEA 277
Query: 397 ----KVGRESLCQIIKDDP------LKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLR 446
+ +E+L +I P LK A + + Q+D ++ +EK L+
Sbjct: 278 LLSFGIQKEALPLVIAQYPSILGLPLKAKLAAQQYFFTLKLQIDPDGIARAIEKLPQLVS 337
Query: 447 LGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLE 506
L N + K ++ RGRG + + V +V R P +L ++++
Sbjct: 338 L----NQNVILKPVEFLRGRG--------------ISNEDVARMVVRCPQILLLRIELMK 379
Query: 507 KKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILAC 565
+ + K+ + P+ ++ +P Y Y + RI R Y+ + RG+ SL L C
Sbjct: 380 NSLYFFKSEMKRPMSELLEYPEYFTYSLESRIKPR---YMRVTSRGI---KCSLDWFLNC 433
Query: 566 SDAKFEKY----FVDVHPEGPA 583
SD +FE F++ GP+
Sbjct: 434 SDMRFEDRMQGDFIEGDAPGPS 455
>gi|326529597|dbj|BAK04745.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 392
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 123/291 (42%), Gaps = 42/291 (14%)
Query: 324 LLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGS 383
L LGL +V SL +++PQ+L +K K L V L +G+ +I+ + + + +
Sbjct: 82 LAGLGLSAADVASLVARDPQLLCAKVEKTLAPKVAGLTGLGLSRPEIARIAFLAGDGLRR 141
Query: 384 CSLKGPKTVCSKLKV------GRESLCQIIKDDPLKLFHLASKTEVKIDEQV----DCQN 433
+ + SKL ++L +++ D + L+S E + V +C
Sbjct: 142 ------RNIVSKLHYYLPLFGSSDNLLRVLNKDS---YLLSSDLERLVKPNVAYLRECGL 192
Query: 434 PSKDVEK------------TEFL-LRLGYVENSEEVTKALKQFRG--------RGDQLQE 472
+ D+ K TE + + +VE V + FR D++
Sbjct: 193 GACDIAKLSAHKPSPLNISTERIRTAVAWVEGLLGVPRGSPMFRHALQAVAFFSEDKITA 252
Query: 473 RFDCLVQAGLDSNVVRNI-VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLC 531
+ + L + ++ I + +AP +L +S++ L+ + ++L + + + PA +C
Sbjct: 253 KVELLRKTFTWTDAEVGIALSKAPKLLTRSEESLQHRSEFLISEVGLQTAYIAQQPAIVC 312
Query: 532 YDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEG 581
Y + GR+ R +L+E G+ K S T+ ++ F F+ H E
Sbjct: 313 YSLEGRLRPRYYAVEFLKENGLLKRNPSYGTVFKDTEKAFRDKFICPHKEA 363
>gi|302775412|ref|XP_002971123.1| hypothetical protein SELMODRAFT_441431 [Selaginella moellendorffii]
gi|300161105|gb|EFJ27721.1| hypothetical protein SELMODRAFT_441431 [Selaginella moellendorffii]
Length = 503
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 470 LQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAY 529
++ R + L++ GL + ++++ P + N ++L KK+ Y + PL S+ F +Y
Sbjct: 365 MEGRLNLLLRHGLSRDECSLLLRKKPSIFNLGDELLSKKLAYYTRVMKQPLSSLCHFSSY 424
Query: 530 LCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
L + M ++ R WL G+A+ S ++ S +F + F+
Sbjct: 425 LTFSMEAKVVPRTTFQHWLYMSGLARKEFSQPYMIMLSSERFTRRFL 471
>gi|359490831|ref|XP_003634173.1| PREDICTED: uncharacterized protein LOC100853133 [Vitis vinifera]
Length = 985
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 438 VEKTEFLLRLGYVENSEEVTKALKQF-RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPM 496
V K L+++GY + E+ A+ R + LQ+ + GL + + + P
Sbjct: 836 VHKLSLLVKIGYQYRTRELAIAMGAVTRTSCENLQKVIGLFLSYGLSCEDIVAMSNKHPQ 895
Query: 497 VLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKP 555
+L + L++KI+YL + ++ ++AFPA+L Y + RI HR ++ ++ +
Sbjct: 896 ILQYNPTSLKEKIEYLIEDMGREVDELLAFPAFLGYKLDDRIKHRYEV-----KKKIIGE 950
Query: 556 TLSLSTILACSDAKFEK 572
+SL+ +L+ S +F +
Sbjct: 951 GMSLNKLLSVSTERFSR 967
>gi|298711155|emb|CBJ32380.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 685
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 150/389 (38%), Gaps = 52/389 (13%)
Query: 224 GLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSY-----NW 278
G S V +++ CP LL + + V +E L++LG + + R + +
Sbjct: 249 GFSGTDVCNMLALCPQLLALDFEGQVVPTMELLRQLGMRPTDVRRVIRKAPEVLAPRPDG 308
Query: 279 DQVSETLDFLYKIGYNEVQL-------LNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKM 331
+E +D L +G L L P F+ F ++G+K
Sbjct: 309 STAAEAVDVLRTLGLRRRHLKMEAMRWPQLLAVPPGSFFQ------LAAFLASEEVGIKS 362
Query: 332 NEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKG--- 388
+ SL Q P ++ +L V FL I G+ D+ ++ + +++ S++G
Sbjct: 363 TNIGSLIRQAPWLVLQPIDGQMLPVVRFL-RIA-GVVDVERVLRAYPKVL-CASIRGELA 419
Query: 389 PKT--VCSKLKVGRESLCQIIKDDPLKL-FHLASKTEVKIDEQVDCQNPSKDVEKT--EF 443
P+ + S + V E L ++++ PL L+ +V D D+ K F
Sbjct: 420 PRVRFLWSDVGVSEEDLPRVLQTFPLVFALPLSRMKDVMAFLSEDLSIGRNDIAKIIRAF 479
Query: 444 LLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKD 503
LG +E + ++ + G Q RF V R P VL +
Sbjct: 480 PSLLG-LERERHMAGVVRYLKRLGVQNVGRF----------------VSRLPPVLGYDVE 522
Query: 504 V-LEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTLSLSTI 562
L K+DYL + + V+ FPAY Y + + ++ +R R + + L+
Sbjct: 523 TNLAPKMDYLVEKMGLSVYDVLTFPAYFSYPLDTVIEPRTEFLAIRGRPIT--LVGLNIA 580
Query: 563 LACSDAKFEKYFVDVHPEGPAMWESLKKS 591
L DA F + V P +++ KK+
Sbjct: 581 LHQGDADFARKVARVQPR---VYQDFKKA 606
>gi|115471775|ref|NP_001059486.1| Os07g0423000 [Oryza sativa Japonica Group]
gi|34394750|dbj|BAC84114.1| unknown protein [Oryza sativa Japonica Group]
gi|113611022|dbj|BAF21400.1| Os07g0423000 [Oryza sativa Japonica Group]
gi|215766640|dbj|BAG98868.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636925|gb|EEE67057.1| hypothetical protein OsJ_24009 [Oryza sativa Japonica Group]
Length = 408
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 30/251 (11%)
Query: 146 EFEPFFESLGLSQSELSPLL---PRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEA 202
+ E F LGL+ +E+ L+ P ++ S + N+ +L D + +++
Sbjct: 137 KIEFFRRELGLTDAEIRRLVLANPYRVLRYSLKRCIRPNYLILRDLLGSDKNVTAAVLQS 196
Query: 203 TEIFRHD-RGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGF 261
T++ D RG+L K+ ++ G + + ++KLV+ P L+ SRF + L +KELG
Sbjct: 197 TDLIHGDVRGILLPKIKILQDYGATNDVIVKLVTTHPRALMHRA-SRFEESLAAMKELGV 255
Query: 262 KNDWIGRYLPGKGSYNWD----------QVSETLDFLYKIGYNEVQLLNLFKTNPALVFE 311
+ P G + + + +D +G+ + Q++ F +P
Sbjct: 256 R--------PSSGMFPYSFGLFARLHPRKWKGRMDNFLSLGWTKEQVIEAFVRHP-YCMS 306
Query: 312 GSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLL---QAVGFLIEIGMGMK 368
S KV +++ L K K+ +++P +LS + K +L + L G+ +
Sbjct: 307 VSNDKVKLIWQFLAK---KLRWTTDYVARSPMVLSFSYDKRILPRCTVLNLLASRGIFNR 363
Query: 369 DISNMVLMHAE 379
DI L+ E
Sbjct: 364 DIKTSHLVLGE 374
>gi|357129184|ref|XP_003566246.1| PREDICTED: uncharacterized protein LOC100840205 [Brachypodium
distachyon]
Length = 382
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 472 ERFDCLVQA-GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYL 530
ER L Q+ G + N V +I++R P + S++ ++K + +L LE +VA+P L
Sbjct: 241 ERKIALYQSLGFEKNHVTSILRRHPGAIGMSEEKIKKNVGFLIGKAGLSLEDIVAYPYML 300
Query: 531 CYDMGRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVH 578
+ ++ RC + LR G + + ++L + +F + +V H
Sbjct: 301 VRNFESLSRRCAVLALLRREGKPEGYHRVPSVLVATMKRFLEVYVRRH 348
>gi|326515494|dbj|BAK06993.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 392
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 123/291 (42%), Gaps = 42/291 (14%)
Query: 324 LLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGS 383
L LGL +V SL +++PQ+L +K K L V L +G+ +I+ + + + +
Sbjct: 82 LAGLGLSAADVASLVARDPQLLCAKVEKTLAPKVAGLTGLGLSRPEIARIAFLAGDGLRR 141
Query: 384 CSLKGPKTVCSKLK------VGRESLCQIIKDDPLKLFHLASKTEVKIDEQV----DCQN 433
+ + SKL ++L +++ D + L+S E + V +C
Sbjct: 142 ------RNIVSKLHHYLPLFGSSDNLLRVLNKDS---YLLSSDLERLVKPNVAYLRECGL 192
Query: 434 PSKDVEK------------TEFL-LRLGYVENSEEVTKALKQFRG--------RGDQLQE 472
+ D+ K TE + + +VE V + FR D++
Sbjct: 193 GACDIAKLSAHKPSPLNISTERIRTAVAWVEGLLGVPRGSPMFRHALQAVAFFSEDKITA 252
Query: 473 RFDCLVQAGLDSNVVRNI-VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLC 531
+ + L + ++ I + +AP +L +S++ L+ + ++L + + + PA +C
Sbjct: 253 KVELLRKTFTWTDAEVGIALSKAPKLLTRSEESLQHRSEFLISEVGLQTAYIAQQPAIVC 312
Query: 532 YDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEG 581
Y + GR+ R +L+E G+ K S T+ ++ F F+ H E
Sbjct: 313 YSLEGRLRPRYYAVEFLKENGLLKRNPSYGTVFKDTEKAFRDKFICPHKEA 363
>gi|297741461|emb|CBI32592.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 143/384 (37%), Gaps = 65/384 (16%)
Query: 221 ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGR----YLPGKGSY 276
EN G+ ++ + ++S CP LL ++ +V L ++G G Y G +
Sbjct: 151 ENNGVRRDWMGNVMSRCPQLLSYSIEEVKTRVGFYL-DMGMNEKDFGTMVFDYPKALGYF 209
Query: 277 NWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYS 336
++++E + +L + G N + L P L+ ++ L LG+ +
Sbjct: 210 TLEEMNEKVSYLKEFGLNNEDVGRLLAFKPQLMGCSIEERWKPFVKYLYYLGVCREGMRR 269
Query: 337 LFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVC--- 393
+ P + K ++ V F +IG+ I NM++ L+ K + V
Sbjct: 270 MLIIKPMVFCVDLEKTIVPKVRFFQDIGIRDDAIGNMLVKFPPLLTYSLYKKIRPVVIFL 329
Query: 394 -SKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVEN 452
+K V R+ + ++I P E + C K ++ L LG
Sbjct: 330 ITKAGVSRKDIAKVIALGP---------------ELLGCSIVHKLEVNVKYFLSLG---- 370
Query: 453 SEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYL 512
+ ++ ++ PM+L + DVL K YL
Sbjct: 371 -----------------------------IPLQILGEMIADFPMLLRYNIDVLRPKYRYL 401
Query: 513 KNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFE 571
+ + PL+ ++ FP + Y + RI R K V R L +LA SD +F
Sbjct: 402 RRTMVRPLKDLIEFPRFFSYSLDDRIIPRHKALVENR------VNFKLRYMLAISDEEFA 455
Query: 572 KYFVDVHPEGPAMWESLKKSSNSS 595
+ V+ E + +ES SS S
Sbjct: 456 RR-VEAAVERRSRFESGLMSSTLS 478
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Query: 176 EVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVS 235
E L D L + G+ R MG + ++ + + +++ Y ++G+++ +V
Sbjct: 141 EELDDIVRYLENNGVRRDWMGNVMSRCPQLLSYSIEEVKTRVGFYLDMGMNEKDFGTMVF 200
Query: 236 CCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSET----LDFLYKI 291
P L + + LKE G N+ +GR L K + E + +LY +
Sbjct: 201 DYPKALGYFTLEEMNEKVSYLKEFGLNNEDVGRLLAFKPQLMGCSIEERWKPFVKYLYYL 260
Query: 292 GYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLK-LGLKMNEVYSLFSQNPQILSSKFV 350
G + + P +VF +K V R + +G++ + + ++ + P +L+
Sbjct: 261 GVCREGMRRMLIIKP-MVFCVDLEKTIVPKVRFFQDIGIRDDAIGNMLVKFPPLLTYSLY 319
Query: 351 KNLLQAVGFLI-EIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSK----LKVGRESLCQ 405
K + V FLI + G+ KDI+ ++ + EL+G CS+ V K L + + L +
Sbjct: 320 KKIRPVVIFLITKAGVSRKDIAKVIALGPELLG-CSIVHKLEVNVKYFLSLGIPLQILGE 378
Query: 406 IIKDDPLKL 414
+I D P+ L
Sbjct: 379 MIADFPMLL 387
>gi|147852084|emb|CAN80174.1| hypothetical protein VITISV_018393 [Vitis vinifera]
Length = 478
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 438 VEKTEFLLRLGYVENSEEVTKALKQF-RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPM 496
V K L+++GY + E+ A+ R + LQ+ + GL + + + P
Sbjct: 337 VYKLSLLVKIGYQYRTRELAIAMGAVTRTSCENLQKVIGLFLSYGLSCEDIVAMSNKHPQ 396
Query: 497 VLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKP 555
+L + L++KI+YL + ++ ++AFPA+L Y + RI HR ++ ++ +
Sbjct: 397 ILQYNPTSLKEKIEYLIEDMGREVDELLAFPAFLGYKLDDRIKHRYEV-----KKKIIGE 451
Query: 556 TLSLSTILACSDAKFEK 572
+SL+ +L+ S +F K
Sbjct: 452 GMSLNKLLSVSTERFFK 468
>gi|30696656|ref|NP_176402.2| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|26450724|dbj|BAC42471.1| unknown protein [Arabidopsis thaliana]
gi|28951041|gb|AAO63444.1| At1g62110 [Arabidopsis thaliana]
gi|332195803|gb|AEE33924.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 462
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 439 EKTEFLLRLGYVENSEEVTKALKQFR---GRGDQ-LQERFDCLVQAGLDSNVVRNIVKRA 494
+ E L + G +E+ EV LK++ G +Q + + + G + +VKR
Sbjct: 296 QTIETLKKCGLLED--EVISVLKKYPQCIGTSEQKILNSIEIFLGLGFSRDEFITMVKRF 353
Query: 495 PMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVA 553
P L S + ++KKI+++ + +PL+ VV+ P L Y++ R RC + L + +
Sbjct: 354 PQCLILSAETVKKKIEFVVKKMNWPLKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLL 413
Query: 554 KPTLS----LSTILACSDAKFEKYFVDVHPEGPAMWE 586
T S +S++L C+D F K +V H + + E
Sbjct: 414 GDTGSELPPMSSVLVCTDELFLKRYVRNHGDKELVLE 450
>gi|226502300|ref|NP_001145894.1| putative mitochondrial transcription termination factor family
protein isoform 1 [Zea mays]
gi|219884853|gb|ACL52801.1| unknown [Zea mays]
gi|413924309|gb|AFW64241.1| putative mitochondrial transcription termination factor family
protein isoform 1 [Zea mays]
gi|413924310|gb|AFW64242.1| putative mitochondrial transcription termination factor family
protein isoform 2 [Zea mays]
Length = 489
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 141/382 (36%), Gaps = 75/382 (19%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
L+ L LG D + Y V L +L K+G +L + PA +
Sbjct: 98 LDFLLRLGLSTDDLSNYPLLLACSLRKNVIPVLSYLEKLGVTRARLAAFVRAYPACLHAS 157
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEI-GMGMKDIS 371
+ + L L + ++ + + P +L K + +V +L+ I G+ +DI
Sbjct: 158 VAVDLAPMVKALRGLDVDRQDLPRVLERYPDVLGLKPDGTISTSVAYLVGIVGVAPRDIG 217
Query: 372 NMVLMHAELMGS-------------CSLKGPKTVCSKL---------------------- 396
MV +G SL P + +++
Sbjct: 218 PMVTHFPFFLGMRVGTTIKPFCDYITSLGLPMRILARILEKRPYILGYDLEETVKPNVEA 277
Query: 397 ----KVGRESLCQIIKDDP------LKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLR 446
+ +E+L +I P LK A + + Q+D ++ +EK L+
Sbjct: 278 LLSFGIQKEALPLVIAQYPSILGLPLKAKLAAQQYFFTLKLQIDPDGFARVIEKLPQLVS 337
Query: 447 LGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLE 506
L N + K ++ RGRG + + V +V R P +L ++++
Sbjct: 338 L----NQNVILKPVEFLRGRG--------------ISNEDVARMVVRCPQILLLRIELMK 379
Query: 507 KKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILAC 565
+ + K+ + P+ ++ +P Y Y + RI R Y+ + RG+ SL L C
Sbjct: 380 NSLYFFKSEMKRPMSELLEYPEYFTYSLESRIKPR---YMRVTSRGI---KCSLDWFLNC 433
Query: 566 SDAKFEKY----FVDVHPEGPA 583
SD +FE F++ GP+
Sbjct: 434 SDMRFEDRMQGDFIEGDAPGPS 455
>gi|294461496|gb|ADE76309.1| unknown [Picea sitchensis]
Length = 376
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 114/289 (39%), Gaps = 42/289 (14%)
Query: 256 LKELGFKNDWIG------RYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALV 309
L E GF D R LPG Y D + +TL FL G N++ + LF P ++
Sbjct: 68 LDECGFSPDEANSICRKKRDLPGHNFY--DNLRQTLLFLKGKGLNDIGVRKLFSEYPTIL 125
Query: 310 ---FEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMG 366
F G+ K V F L K+GL ++ ++NP L + L V FL +
Sbjct: 126 RSSFRGT-VKPKVEF--LEKIGLTGQKLRKALNRNPLFLKLSVSRTLEPRVCFLQSV--- 179
Query: 367 MKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKID 426
+ + S + SK+ +I +P + S + KI
Sbjct: 180 ---------LDPDPTAVVSNSESDKIASKVVSNHSLTTSVISKNP----RILSLSTAKIL 226
Query: 427 EQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKA-LKQFRGRGDQLQERFDCLVQAGLDSN 485
+ KDVE +G + S+ +A L+ D ++ + L + G
Sbjct: 227 AGL-----VKDVEG------MGIEKGSKAFARAYLRLSMLNRDTVKLKLKNLRELGFTEE 275
Query: 486 VVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM 534
V +VKR P +L S+D L + + +L P +++ PA LCY +
Sbjct: 276 EVGILVKRFPQLLGSSEDKLRQNLKFLVEEWKLPRNFILSLPAVLCYSI 324
>gi|242066760|ref|XP_002454669.1| hypothetical protein SORBIDRAFT_04g035210 [Sorghum bicolor]
gi|241934500|gb|EES07645.1| hypothetical protein SORBIDRAFT_04g035210 [Sorghum bicolor]
Length = 489
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 141/381 (37%), Gaps = 75/381 (19%)
Query: 253 LEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEG 312
L+ L LG D + Y V L +L K+G +L + PA +
Sbjct: 97 LDFLLRLGLSTDDLSNYPLLLACSLRKNVIPVLSYLEKLGVTRARLAAFVRAYPACLHAS 156
Query: 313 SGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEI-GMGMKDIS 371
+ + L L + ++ + + P +L K + +V +L+ I G+ +DI
Sbjct: 157 VAVDLAPMVKALRGLDVDRQDLPRVLERYPDVLGLKPDGTISTSVAYLVGIVGVAPRDIG 216
Query: 372 NMVLMHAELMGS-------------CSLKGPKTVCSKL---------------------- 396
MV +G SL P + +++
Sbjct: 217 PMVTHFPFFLGMRVGTTIKPFCDYITSLGLPMRILARILEKRPYILGYDLEETVKPNVEA 276
Query: 397 ----KVGRESLCQIIKDDP------LKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLR 446
+ +E+L +I P LK A + + Q+D ++ VEK L+
Sbjct: 277 LLSFGIQKEALPLVIAQYPSILGLPLKAKLAAQQYFFSLKLQIDPDGFARAVEKLPQLVS 336
Query: 447 LGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLE 506
L N + K ++ RGRG + + V +V R P +L ++++
Sbjct: 337 L----NQNVILKPVEFLRGRG--------------ISNEDVARMVVRCPQILLLRIELMK 378
Query: 507 KKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILAC 565
+ + K+ + P+ ++ +P Y Y + RI R Y+ + +G+ SL L C
Sbjct: 379 NSLYFFKSEMKRPMSELLEYPEYFTYSLESRIKPR---YMRVTSKGI---KCSLDWFLNC 432
Query: 566 SDAKFEKY----FVDVHPEGP 582
SD +FE+ F++ GP
Sbjct: 433 SDMRFEERMQGDFIEGDAPGP 453
>gi|297797802|ref|XP_002866785.1| PDE191 [Arabidopsis lyrata subsp. lyrata]
gi|297312621|gb|EFH43044.1| PDE191 [Arabidopsis lyrata subsp. lyrata]
Length = 339
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 187 DYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAY--ENLGLSKNTVIKLVSCCPSLLIGG 244
D G + KM + ++ + V AS+ W Y +G+ + + +VS CP +L
Sbjct: 6 DKGFDDPSIDKMLRKCKQLDKAQSDV-ASENWDYLRNIVGIQERKLPYIVSRCPKILTLR 64
Query: 245 VDSRFVKVLEKLKELGFK----NDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLN 300
+D R + ++E L LG + I ++ P +++ L F +G E QL
Sbjct: 65 LDERLIPMVECLSSLGRNPREVSSAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGK 124
Query: 301 LFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNE-VYSLFSQNPQILSSKFVKNLLQAVGF 359
+ NP L+ K+ V+ L LGL + + + +NP ++ K L F
Sbjct: 125 MILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEF 184
Query: 360 L-IEIGMGMKDISNMVLMHAELM 381
L +G+ I ++V+ +L+
Sbjct: 185 LKSSVGLSEDGIQSVVMNFPQLL 207
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 123/304 (40%), Gaps = 26/304 (8%)
Query: 279 DQVSETLDFLYKI-GYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSL 337
D SE D+L I G E +L + P ++ +++ + L LG EV S
Sbjct: 30 DVASENWDYLRNIVGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVSSA 89
Query: 338 FSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLK 397
++ P ILS + L + F +G+ + M+L + L+ ++ +KL
Sbjct: 90 ITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISY-------SIDTKLT 142
Query: 398 VGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFL-LRLGYVENS-EE 455
V L + D + + K + VD + TEFL +G E+ +
Sbjct: 143 VIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD----KRLRPTTEFLKSSVGLSEDGIQS 198
Query: 456 VTKALKQF--RGRGDQLQERFDCLVQAGL-DSNVVRNIVKRAPMVLNQSKDVLEKKIDYL 512
V Q R L+ +D L + G DS + + P+++ K+ L+ +I +L
Sbjct: 199 VVMNFPQLLCRDVNKILKPNYDYLRECGFGDSQIATMVTGYPPILIKSIKNSLQPRIRFL 258
Query: 513 KNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTL--SLSTILACSDAKF 570
+ ++ V ++P + +H K V R + V K + SL +L C+ KF
Sbjct: 259 VQVMGRGMDEVASYPEFF-------HHGLKKKVESRFKLVKKNNIVCSLREMLDCNTKKF 311
Query: 571 EKYF 574
+ F
Sbjct: 312 HEKF 315
>gi|294463065|gb|ADE77070.1| unknown [Picea sitchensis]
Length = 359
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 386 LKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLL 445
L+ ++ KL V E+L +I+ P HL + +E K+ E K VE
Sbjct: 161 LRSSISLLQKLGVEGEALSEILAWHP----HLLTASEEKVTESF------KQVED----- 205
Query: 446 RLGYVENSEEVTKALKQFRGRG-DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDV 504
LG+ + S+ AL + G G ++L + CL G V + + P++L S++
Sbjct: 206 -LGFKKGSKMFRIALGAYFGLGKEKLDRKLQCLSSLGFSKQQVLYLASQRPLILTLSEEK 264
Query: 505 LEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGV--AKPTLSLST 561
L++ +D+L + PL + +P + R+ R ++ ++ V +K +
Sbjct: 265 LKRNVDFLVKTVGLPLADIAKYPDLFANSLETRMIPRYRVLEAIKSMQVQASKRRMCFPK 324
Query: 562 ILACSDAKFEKYFVDVHPE 580
I+ ++++F + +V+ + E
Sbjct: 325 IIGLTESRFLEVYVNSNAE 343
>gi|428182253|gb|EKX51114.1| hypothetical protein GUITHDRAFT_103033 [Guillardia theta CCMP2712]
Length = 591
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 100/248 (40%), Gaps = 40/248 (16%)
Query: 159 SELSPLLPRHLMFL--SDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASK 216
S+L PL H S D L N L + G+P+SK+ + ++A ++ R ++
Sbjct: 286 SKLEPLAIAHPEVFESSVDFTLRKNVEFLLEMGVPKSKIPVLVLKAPDLLLTGRFLVQDL 345
Query: 217 LWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSY 276
+ +G+ + V + +S P +L+ G+ S + LE +L +G
Sbjct: 346 VAFLIEIGVREERVGRCLSRNPQMLMSGLQSSMISTLE--------------FLIIEGGI 391
Query: 277 NWDQVSETLDFL-----YKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKM 331
+V E ++ Y + +N Q +N K L E G +Y F +LL L L+
Sbjct: 392 PRSKVGEVIEMFPLLMSYNVEFNLRQKINFLKLEFELEPEAIGSILYK-FPQLLGLSLEA 450
Query: 332 N-----------------EVYSLFSQNPQILSSKFVKNLLQAVGFLI-EIGMGMKDISNM 373
N ++ L Q PQIL KNL + F + E+G+ + +
Sbjct: 451 NIKPTTQFLMDTLRMTKEDLTRLILQTPQILGLNVHKNLEPKIDFFLQELGVPLDKLVAA 510
Query: 374 VLMHAELM 381
V L+
Sbjct: 511 VRTAPSLL 518
>gi|428179352|gb|EKX48223.1| hypothetical protein GUITHDRAFT_105830 [Guillardia theta CCMP2712]
Length = 518
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 39/235 (16%)
Query: 188 YGIPRSKMGKMYVEATEIFRH---------------DRGVLASKL-----WAYENLGLSK 227
+GI +++GKM+V IF + D GV AS+L + NL +++
Sbjct: 172 FGISEAELGKMFVRYPSIFANSIDNHLMPLMDFLLIDIGVDASRLKPNTAFFTNNLKIAR 231
Query: 228 NTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGF-KNDWIGR-----YLPGKGSYN-WDQ 280
+ +++ CP +L +++ K+ +E+GF K + + YL + Y W
Sbjct: 232 SDFARMIEKCPWILCMKIETIQNKIELMTEEIGFTKKECVAMLKKEPYLLSRSRYRLWST 291
Query: 281 VSETLD--FLYKIGYNEV---------QLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGL 329
+ +D +K N LL L K +P ++ GS + RL LG
Sbjct: 292 YNGLVDAGIPHKSALNVRPAKCLLGFDALLQLLKISPRILLFGSREIARNNMERLKALGF 351
Query: 330 KMNEVYSLFSQNPQILSS-KFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGS 383
N+V L +NP IL++ N+++ L G ++I + ++MGS
Sbjct: 352 GENDVLRLLKKNPNILTTINLSDNVVEIDKLLSCYGFQDQEIVRVFERAPQIMGS 406
>gi|255573457|ref|XP_002527654.1| RNA binding protein, putative [Ricinus communis]
gi|223532959|gb|EEF34725.1| RNA binding protein, putative [Ricinus communis]
Length = 830
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 473 RFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCY 532
+ D + L + + + ++ P ++ S++ + K+D+L N + + ++ PAY Y
Sbjct: 691 KIDAFRRWDLSEDEILSAFRKYPHCMSFSEESITNKMDFLVNRMGWQPAVILKNPAYFTY 750
Query: 533 DM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF-EKYFVDVHPEGPAMWE 586
+ RI RC + L +G+ KP + L ILA +D F EKY + P + +
Sbjct: 751 SLEKRIAPRCSVVRVLLLKGLIKPKICLVPILAPTDDSFLEKYVFKYQEQVPELLD 806
>gi|356526960|ref|XP_003532083.1| PREDICTED: uncharacterized protein LOC100806920 [Glycine max]
Length = 403
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 471 QERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYL 530
+ RF+ + G + + V++ P ++ S++V KK+ +L + E + +P +
Sbjct: 274 ESRFEVYERCGWNREIALGAVRKFPSIVKLSEEVFIKKMSFLVKDMGCSSEDIAEYPQVV 333
Query: 531 CYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF-EKYFVDVH---PEGPAMW 585
Y++ RI R + L+ +G+ K L S I+ ++A F EK+ ++ P P +
Sbjct: 334 TYNLEKRIIPRFSIIKMLKSKGLLKKNLHFSAIICITEANFLEKFVINFQKDLPFLPDYY 393
Query: 586 ESLKKSSN 593
SL N
Sbjct: 394 NSLANQQN 401
>gi|356567424|ref|XP_003551920.1| PREDICTED: uncharacterized protein LOC100813396 [Glycine max]
Length = 393
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 112/274 (40%), Gaps = 26/274 (9%)
Query: 328 GLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLK 387
G EV L ++P++L + K LL + F IG+ D+S M++ + ++ K
Sbjct: 96 GFSKTEVAKLVEKHPRVLVANAEKTLLPKLQFFHSIGVSNTDMSKMIIKNPLILRRSLAK 155
Query: 388 GPKTVCSKLK-VGRESL--CQIIKDDPLKLFH------LASKTEVKIDE----------- 427
+C ++ V + L ++++ P + L EV
Sbjct: 156 FLVPLCRMIRRVVHDDLEVVKVLRKSPFAFTYADMVNGLVPNIEVLRQSGVPQGSISLLM 215
Query: 428 ----QVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQ-FRGRGDQLQERFDCLVQAGL 482
V S+ VE + + + G+ A++ + R L+ RF+ + G
Sbjct: 216 VHFPSVAYGKHSRFVEAVKRVKKFGFDPLKTAFVMAIQVLYNMRKLALELRFEIYERWGW 275
Query: 483 DSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRC 541
+ + + P + S +++ KK+++L + E + A+P L Y++ RI R
Sbjct: 276 NREMALQAFVKYPNFIKLSDEMVTKKMNFLVKDMGLSPEYIAAYPTVLGYNLEKRIVPRL 335
Query: 542 KMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
+ L+ +G+ K L S+ L ++ F K FV
Sbjct: 336 SVIKILKSKGLVKNNLQSSSFLCITEEIFLKKFV 369
>gi|221327713|gb|ACM17534.1| mitochondrial transcription termination factor-like family-1 [Oryza
australiensis]
Length = 409
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 491 VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRE 549
V + P +L S + L +KI++L + + +V P LCY + R+ R + L+
Sbjct: 275 VGKKPTILGLSMENLRRKIEFLVTKVGLKTQCIVECPVILCYSLEKRVVPRHSVMEILQA 334
Query: 550 RGVAKPTLSLSTILACSDAKFEKYFVDVH 578
RG+ K S +++ C +A F ++D H
Sbjct: 335 RGLMKKDASFHSLITCREADFVARYIDTH 363
>gi|302143980|emb|CBI23085.3| unnamed protein product [Vitis vinifera]
Length = 1884
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 438 VEKTEFLLRLGYVENSEEVTKALKQF-RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPM 496
V K L+++GY + E+ A+ R + LQ+ + GL + + + P
Sbjct: 369 VHKLSLLVKIGYQYRTRELAIAMGAVTRTSCENLQKVIGLFLSYGLSCEDIVAMSNKHPQ 428
Query: 497 VLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHR 540
+L + L++KI+YL + ++ ++AFPA+L Y + RI HR
Sbjct: 429 ILQYNPTSLKEKIEYLIEDMGREVDELLAFPAFLGYKLDDRIKHR 473
>gi|255587488|ref|XP_002534290.1| conserved hypothetical protein [Ricinus communis]
gi|223525568|gb|EEF28093.1| conserved hypothetical protein [Ricinus communis]
Length = 372
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 117/273 (42%), Gaps = 62/273 (22%)
Query: 324 LLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFL--IEIGMGMKDISNMVLMHAELM 381
L KLGL +++ F++ P +L KN++ +G+L I + +G K +++ + +++
Sbjct: 126 LQKLGLTIDD----FNEYPLMLGCSVRKNIIPVLGYLEKIVLELGRKHFLSVIAQYPQIL 181
Query: 382 GSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKT 441
G PLK + + + ++D + ++ +EK
Sbjct: 182 GL---------------------------PLKAKLSSQQYFFNLKIKIDPEGFAEVIEKM 214
Query: 442 EFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS 501
++ L N + K ++ GRG + S V +V + P ++
Sbjct: 215 PQIVSL----NQNVIKKPVEFLLGRG--------------IPSEDVAKMVVKCPQLVALR 256
Query: 502 KDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLS 560
+++ + K+ + PL+ +V FP Y Y + RI R +M L+ +G+ SL+
Sbjct: 257 VPLMKNSFYFYKSEMGRPLKELVDFPEYFTYSLESRIKPRYQM---LQSKGI---RCSLN 310
Query: 561 TILACSDAKFEKY----FVDVHPEGPAMWESLK 589
L CSD +FE+ +++ GP+ ++ K
Sbjct: 311 WFLNCSDQRFEERLQGDYIESESPGPSFFKGGK 343
>gi|357138250|ref|XP_003570710.1| PREDICTED: uncharacterized protein LOC100825825 [Brachypodium
distachyon]
Length = 496
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 143/373 (38%), Gaps = 61/373 (16%)
Query: 221 ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYN 277
E LG+++ + V P+ L V V++ L+ L I R L P
Sbjct: 140 EKLGVTRARLAAFVRAYPACLHASVAVDLAPVVKALRGLDVDRQDIPRVLDRYPDLLGLK 199
Query: 278 WD-QVSETLDFLYKI-GYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVY 335
D +S ++ +L I G + + P + G + L + LGL M +
Sbjct: 200 PDGTISTSVAYLVGIVGVAPRDIGPMVTHYPFFLSMRVGTTIKPLCDYITSLGLPMRILA 259
Query: 336 SLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSK 395
+ + P IL + + V L+ G+ + + ++ + ++G
Sbjct: 260 RILEKRPYILGYHLQETVRPNVEALLSFGVRKEVLPLVIAQYPSILGL------------ 307
Query: 396 LKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEE 455
PLK+ A + + ++D ++ VEK L+ L +
Sbjct: 308 ---------------PLKVKLAAQQYFFNLKLKIDPDGFARAVEKLPQLVSL----HQNV 348
Query: 456 VTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNY 515
+ K ++ RGRG D +V R +V R P +L ++++ + K+
Sbjct: 349 ILKPVEFLRGRGIT-------------DEDVGRMLV-RCPQILLLRNELMKNSFYFFKSE 394
Query: 516 LCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKY- 573
L P+ ++ +P Y Y + RI R Y+ + +G+ SL L CSD +FE+
Sbjct: 395 LKRPISELLDYPEYFTYSLESRIKPR---YMRVASKGI---RCSLDWFLNCSDQRFEERM 448
Query: 574 ---FVDVHPEGPA 583
F++ GP+
Sbjct: 449 RGDFIEGDAPGPS 461
>gi|38382945|gb|AAH62515.1| mterfd1-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 379
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 42/248 (16%)
Query: 61 PKVSLAESTQPPASLVASRVSRLARTEAQEVLFDYLHSTRSLGYM-----DAEHISKNSP 115
P L E T+ A+ +A+ + L A L DY+ + +L + D + K P
Sbjct: 80 PLSPLEEITENEAAQIAADLPILP---ASFTLQDYVDQSETLKKLVLLGVDLSKLEKR-P 135
Query: 116 DFVLNLLSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDD 175
+ V N L ++D +DV+R L+ F + +GL S+L L ++ LS+D
Sbjct: 136 N-VANFLLRLDFERDVSRFLL-------------FLKDVGLEDSQLGAFLSKNPFILSED 181
Query: 176 EVLLDNFHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTV 230
L+N Y + + +M +A + L ++L ++ LGLS
Sbjct: 182 ---LENLQKRVSYLRLKEFSKEAVARMVAKAPYLLNFSIERLDNRLGFFQRELGLSTEKT 238
Query: 231 IKLVSCCPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSE 283
L+ P LL G ++ V E LK ELGFK + I +P + N ++ E
Sbjct: 239 RDLIIRLPRLLTGSLEP----VRENLKVCEIELGFKKNEIQHIAIKVPKILTANKKKLME 294
Query: 284 TLDFLYKI 291
T D+++ I
Sbjct: 295 TFDYVHNI 302
>gi|195604944|gb|ACG24302.1| PDE191 [Zea mays]
Length = 333
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 187 DYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYEN--LGLSKNTVIKLVSCCPSLLIGG 244
D G + KM + ++ + V AS+ W Y + +G+ + + +VS CP +L
Sbjct: 15 DKGFDDPSIDKMLRKCKQLEKAQSDV-ASENWDYLSNIVGIQERKLPYIVSRCPKILTLR 73
Query: 245 VDSRFVKVLEKLKELGFK----NDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLN 300
+D R + ++E L LG I ++ P +++ L F +G E QL
Sbjct: 74 LDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGK 133
Query: 301 LFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNE-VYSLFSQNPQILSSKFVKNLLQAVGF 359
+ NP L+ K+ V+ L LGL + + + +NP ++ K L F
Sbjct: 134 MILFNPRLISYSIDTKLTVIVSLLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEF 193
Query: 360 L-IEIGMGMKDISNMVLMHAELM 381
L +G+ I ++V+ +L+
Sbjct: 194 LKSSVGLSEDGIKSVVMNFPQLL 216
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 33/309 (10%)
Query: 274 GSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNE 333
S NWD +S +G E +L + P ++ +++ + L LG E
Sbjct: 41 ASENWDYLSNI------VGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPRE 94
Query: 334 VYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVC 393
V S ++ P ILS + L + F +G+ + M+L + L+ ++
Sbjct: 95 VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISY-------SID 147
Query: 394 SKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQ-NPSKDVEKTEFL-LRLGYVE 451
+KL V L + D + + K + VD + P+ TEFL +G E
Sbjct: 148 TKLTVIVSLLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPT-----TEFLKSSVGLSE 202
Query: 452 NS-EEVTKALKQF--RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS-KDVLEK 507
+ + V Q R L+ +D L + G + + +V P +L +S K+ L+
Sbjct: 203 DGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQP 262
Query: 508 KIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTL--SLSTILAC 565
+I +L + ++ V ++P + +H K V R + V K + SL +L C
Sbjct: 263 RIRFLVQVMGRGMDEVASYPEFF-------HHGLKKKVESRFKLVKKNNIDCSLREMLDC 315
Query: 566 SDAKFEKYF 574
+ KF + F
Sbjct: 316 NTKKFHEKF 324
>gi|297840317|ref|XP_002888040.1| hypothetical protein ARALYDRAFT_893280 [Arabidopsis lyrata subsp.
lyrata]
gi|297333881|gb|EFH64299.1| hypothetical protein ARALYDRAFT_893280 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 439 EKTEFLLRLGY-VENSEEVTKALKQFRGRGDQ-LQERFDCLVQAGLDSNVVRNIVKRAPM 496
EK RLG+ V + E+ K F G ++ + + V + + +VKR P
Sbjct: 217 EKVNLYKRLGFDVGDVWEMFKKFPTFLGLSEKKIANSIETFVSLRFTRDEIVVMVKRFPP 276
Query: 497 VLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKP 555
+ S + ++KK ++L + +PL++V +FP + Y + R RC + L +G+
Sbjct: 277 CIGCSAESVKKKTEFLVKKMNWPLKAVASFPQVIGYSLEKRTVPRCNVIKVLISKGLLGS 336
Query: 556 TL-SLSTILACSDAKFEKYFVDVH 578
L LS +L+ +D F +V H
Sbjct: 337 ELPPLSCVLSITDPAFLNKYVVKH 360
>gi|52076947|dbj|BAD45958.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 651
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 154/367 (41%), Gaps = 53/367 (14%)
Query: 223 LGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNW---- 278
+G+ K + ++ P +++ V++ + +++G + ++IGR L Y W
Sbjct: 291 IGIPKPRIASVLLSFPPIILSDVENDIKPRINAWEKVGIEQEYIGRML---LKYPWILST 347
Query: 279 ---DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVY 335
+ + L F + + L ++ P + S +++ + LG+ +
Sbjct: 348 CVLENYGQMLMFFQRRKISSTVLGVAMRSWPH-ILGCSTKRMNSIVELFDDLGISKKMLV 406
Query: 336 SLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSC---SLKGPKTV 392
+ + +PQ+L K ++Q + F ++G+ K ++ ++ E+ S +LK
Sbjct: 407 PVVTSSPQLLLRK-PNEVMQIILFFKDMGLDKKTVAKILCRSPEIFASSVENTLKKKINF 465
Query: 393 CSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVEN 452
V + L +II+ P L ++T + PS T+F N
Sbjct: 466 LIDFGVPKHYLPRIIRKYPELLLLDINRTML----------PSSCEHVTDF--------N 507
Query: 453 SEEVTKALKQFRGRGDQLQERFDCLVQAGLDS-NVVRNIVKRAPMVLNQSKDVLEKKIDY 511
S + R + L+ GL NV I + +P++ + V++ K+++
Sbjct: 508 SSMYSNVY------------RINYLLDMGLSKKNVCSMIYRFSPLLGYSIELVMKPKLEF 555
Query: 512 LKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
L + PL++VV +P Y Y + GRI R + L+ R + SL+ +LA +D F
Sbjct: 556 LLRTMKKPLKAVVEYPRYFSYSLEGRIKPR---FCVLQSRKI---DCSLTDMLAKNDELF 609
Query: 571 EKYFVDV 577
+ ++ V
Sbjct: 610 AEEYLGV 616
>gi|326488471|dbj|BAJ93904.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 142/373 (38%), Gaps = 61/373 (16%)
Query: 221 ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYN 277
E LG+++ + V P+ L V +++ L+ L I R L P
Sbjct: 171 EKLGVTRARLAAFVRAYPACLHASVAVDLAPIVKALRGLDVDRQDIPRVLERYPDVLGLK 230
Query: 278 WD-QVSETLDFLYKI-GYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVY 335
D +S ++ +L I G + + P + G + + LGL M +
Sbjct: 231 PDGTISTSVAYLVGILGVAPRDIGPMVTHYPFFLSMRVGTTIKPFCDYITSLGLPMRILA 290
Query: 336 SLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSK 395
+ + P IL + + V L+ G+ + + M+ + ++G
Sbjct: 291 RIIEKRPYILGYDLEETVKPNVEALLSFGIRKEVLPLMIAQYPSILGL------------ 338
Query: 396 LKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEE 455
PLK+ A + + ++D ++ VEK L+ L +
Sbjct: 339 ---------------PLKVKLAAQQYFFNLKLKIDPDGFARAVEKLPQLVSL----HQNV 379
Query: 456 VTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNY 515
+ K ++ RGRG D ++ R ++ R P +L ++++ + K+
Sbjct: 380 ILKPVEFLRGRGIT-------------DDDIGRMLI-RCPQILLLRNELMKNSFYFFKSE 425
Query: 516 LCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKY- 573
L P+ ++ +P Y Y + RI R Y+ + +G+ SL L CSD +FE+
Sbjct: 426 LKRPISELLEYPEYFTYSLESRIKPR---YMRVASKGI---RCSLDWFLNCSDQRFEERM 479
Query: 574 ---FVDVHPEGPA 583
F++ GP+
Sbjct: 480 RGDFIEGDAPGPS 492
>gi|294463848|gb|ADE77447.1| unknown [Picea sitchensis]
Length = 329
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 27/269 (10%)
Query: 328 GLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLK 387
GL +++ +F +NP +L+ + + V L + G + +S +++ H ++ LK
Sbjct: 65 GLCQSDLPVIFRRNPTLLACRSAHTAREVVKLLRDSGCTEEQVSKIIIEHPTVL---CLK 121
Query: 388 GPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRL 447
+ + K+++ + S I D L +L SK + +D K ++ L+
Sbjct: 122 TDRQLKPKIELFKTS--GITGKD---LVNLISKFPRVLGSNLD-----KTLKPNIQYLQS 171
Query: 448 GYVENSEEVTKALKQ-----FRGRGDQLQER-FDCLVQAGLDSNVVRNIVKRAPMVLNQS 501
+ E+ V+KA ++ G Q+ ER L GL ++ +V + P VLN S
Sbjct: 172 MW-ESKASVSKAFQKASHLLIYSDGPQIWERRMMHLASFGLLKEEIKELVWKNPQVLNIS 230
Query: 502 KDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPT---L 557
D ++K +D+L P ++ +P L Y + GR+ R ++ L+ R +P+
Sbjct: 231 TDKMQKNMDFLIYTAQLPANIILKYPMLLRYSVEGRLKSRLQV---LKFRSAVQPSERLP 287
Query: 558 SLSTILACSDAKFEKYFVDVHPEGPAMWE 586
+L+ + KF +V P+ + E
Sbjct: 288 NLADAFQLGNLKFVDKYVKCSPDATKLIE 316
>gi|224102761|ref|XP_002312791.1| predicted protein [Populus trichocarpa]
gi|222849199|gb|EEE86746.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 99/225 (44%), Gaps = 9/225 (4%)
Query: 150 FFESLGLSQSELSPLLPR--HLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFR 207
+ +++G+ + +L ++ + ++ L +E L+ L G ++ I
Sbjct: 41 YLKTIGIQERKLPSIISKCPKVLTLGLNEKLIPMVECLATLGSKPREIASAITRFPHILS 100
Query: 208 HD-RGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKND-W 265
H L L ++ LG+ + + K++ P L+ +DS+ ++++ L LG D
Sbjct: 101 HSVEEKLCPLLAFFQALGVPEKQLGKILLLNPRLISYSIDSKLTQIVDFLAALGLTKDGM 160
Query: 266 IGRYL---PGKGSYNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLF 321
IG+ L P Y+ D+ + T +FL +G E+ L + P ++ + + F
Sbjct: 161 IGKVLVKHPFIMGYSVDKRLRPTSEFLKSVGLTELDLQTVVMNFPEVLCRDVNKILKPNF 220
Query: 322 GRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMG 366
L + G ++ +L + P IL +L + FL+E+ MG
Sbjct: 221 AYLRRCGFNDRQIAALVTGYPPILIKSIRNSLEPRIKFLVEV-MG 264
>gi|42573213|ref|NP_974703.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|332661487|gb|AEE86887.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 363
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 187 DYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYEN--LGLSKNTVIKLVSCCPSLLIGG 244
D G + KM + ++ + V AS+ W Y + +G+ + + +VS CP +L
Sbjct: 15 DKGFDDPSIDKMLRKCKQLEKAQSDV-ASENWDYLSNIVGIQERKLPYIVSRCPKILTLR 73
Query: 245 VDSRFVKVLEKLKELGFK----NDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLN 300
+D R + ++E L LG I ++ P +++ L F +G E QL
Sbjct: 74 LDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGK 133
Query: 301 LFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNE-VYSLFSQNPQILSSKFVKNLLQAVGF 359
+ NP L+ K+ V+ L LGL + + + +NP ++ K L F
Sbjct: 134 MILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEF 193
Query: 360 L-IEIGMGMKDISNMVLMHAELM 381
L +G+ I ++V+ +L+
Sbjct: 194 LKSSVGLSEDGIKSVVMNFPQLL 216
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 124/308 (40%), Gaps = 31/308 (10%)
Query: 274 GSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNE 333
S NWD +S +G E +L + P ++ +++ + L LG E
Sbjct: 41 ASENWDYLSNI------VGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPRE 94
Query: 334 VYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVC 393
V S ++ P ILS + L + F +G+ + M+L + L+ ++
Sbjct: 95 VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISY-------SID 147
Query: 394 SKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFL-LRLGYVEN 452
+KL V L + D + + K + VD + TEFL +G E+
Sbjct: 148 TKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD----KRLRPTTEFLKSSVGLSED 203
Query: 453 S-EEVTKALKQF--RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS-KDVLEKK 508
+ V Q R L+ +D L + G + + +V P +L +S K+ L+ +
Sbjct: 204 GIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPR 263
Query: 509 IDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTL--SLSTILACS 566
I +L + ++ V ++P + +H K V R + V K + SL +L C+
Sbjct: 264 IRFLVQVMGRGMDEVASYPEFF-------HHGLKKKVESRFKLVKKNNIDCSLREMLDCN 316
Query: 567 DAKFEKYF 574
KF + F
Sbjct: 317 TKKFHEKF 324
>gi|15233700|ref|NP_195529.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|4467122|emb|CAB37556.1| putative protein [Arabidopsis thaliana]
gi|7270800|emb|CAB80481.1| putative protein [Arabidopsis thaliana]
gi|20147357|gb|AAM10391.1| AT4g38160/F20D10_280 [Arabidopsis thaliana]
gi|23308295|gb|AAN18117.1| At4g38160/F20D10_280 [Arabidopsis thaliana]
gi|332661486|gb|AEE86886.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 333
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 187 DYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYEN--LGLSKNTVIKLVSCCPSLLIGG 244
D G + KM + ++ + V AS+ W Y + +G+ + + +VS CP +L
Sbjct: 15 DKGFDDPSIDKMLRKCKQLEKAQSDV-ASENWDYLSNIVGIQERKLPYIVSRCPKILTLR 73
Query: 245 VDSRFVKVLEKLKELGFK----NDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLN 300
+D R + ++E L LG I ++ P +++ L F +G E QL
Sbjct: 74 LDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGK 133
Query: 301 LFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNE-VYSLFSQNPQILSSKFVKNLLQAVGF 359
+ NP L+ K+ V+ L LGL + + + +NP ++ K L F
Sbjct: 134 MILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEF 193
Query: 360 L-IEIGMGMKDISNMVLMHAELM 381
L +G+ I ++V+ +L+
Sbjct: 194 LKSSVGLSEDGIKSVVMNFPQLL 216
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 33/309 (10%)
Query: 274 GSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNE 333
S NWD +S +G E +L + P ++ +++ + L LG E
Sbjct: 41 ASENWDYLSNI------VGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPRE 94
Query: 334 VYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVC 393
V S ++ P ILS + L + F +G+ + M+L + L+ ++
Sbjct: 95 VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISY-------SID 147
Query: 394 SKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQ-NPSKDVEKTEFL-LRLGYVE 451
+KL V L + D + + K + VD + P+ TEFL +G E
Sbjct: 148 TKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPT-----TEFLKSSVGLSE 202
Query: 452 NS-EEVTKALKQF--RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS-KDVLEK 507
+ + V Q R L+ +D L + G + + +V P +L +S K+ L+
Sbjct: 203 DGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQP 262
Query: 508 KIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTL--SLSTILAC 565
+I +L + ++ V ++P + +H K V R + V K + SL +L C
Sbjct: 263 RIRFLVQVMGRGMDEVASYPEFF-------HHGLKKKVESRFKLVKKNNIDCSLREMLDC 315
Query: 566 SDAKFEKYF 574
+ KF + F
Sbjct: 316 NTKKFHEKF 324
>gi|297821369|ref|XP_002878567.1| EMB2219 [Arabidopsis lyrata subsp. lyrata]
gi|297324406|gb|EFH54826.1| EMB2219 [Arabidopsis lyrata subsp. lyrata]
Length = 613
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 138/371 (37%), Gaps = 100/371 (26%)
Query: 251 KVLEKLKELGFKNDWIGRYLPGKG----SYNWDQVSETLDFLYKIGYNEVQLLNLFKTNP 306
+++E L+ G + DW+G Y+ G+ S++ ++V +DF K+G N+ + P
Sbjct: 280 EIVEYLESNGVRRDWMG-YVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYP 338
Query: 307 ALV----FEGSGQKVYVL---------FGRLLK-----------------------LGLK 330
++ FE +K+ L GRLL LG+
Sbjct: 339 KIIGYFSFEEMEKKINYLKEFGLSTEEVGRLLAFKPHLMGCSIEERWKPLVKYFYYLGIP 398
Query: 331 MNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPK 390
+ + P + K + V FL E+G+ + I NM++ L+ + K +
Sbjct: 399 KEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIR 458
Query: 391 TVC----SKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLR 446
V ++ V ++ + ++I DP L C +K + +
Sbjct: 459 PVVIFLLTRAGVTQKDIGKVIAMDPALL---------------GCSIGTKLEPNMRYYIS 503
Query: 447 LGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLE 506
LG +F G+ + + F L++ +D+ L
Sbjct: 504 LGI------------RFHQLGEMIAD-FPMLLRYNVDN--------------------LR 530
Query: 507 KKIDYLKNYLCYPLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPTLSLSTILAC 565
K YL+ + PL+ ++ FP + Y + RI R + V R L +LAC
Sbjct: 531 PKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR------VNFKLRYMLAC 584
Query: 566 SDAKFEKYFVD 576
+D +FE+ D
Sbjct: 585 TDEEFERRVRD 595
>gi|357464197|ref|XP_003602380.1| hypothetical protein MTR_3g092710 [Medicago truncatula]
gi|355491428|gb|AES72631.1| hypothetical protein MTR_3g092710 [Medicago truncatula]
Length = 506
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 444 LLRLGYVENSEEVTKALK-QFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSK 502
L+++GY ++E+ A+ R + +Q+ + G + + K+ P +L
Sbjct: 368 LVKIGYKYRTKELAVAIAASTRISCENMQKMVSLFLNYGFSLEDIFAMSKKHPQILQYHH 427
Query: 503 DVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLST 561
LEKK+DY+ + ++ ++ FPAYL Y + RI HR ++ LR +S++
Sbjct: 428 ASLEKKMDYMIEEMNRDIQELLDFPAYLGYKLDDRIKHRYEIKKDLRGE-----QMSINK 482
Query: 562 ILACSDAKF 570
+L S F
Sbjct: 483 LLTVSSENF 491
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 21/253 (8%)
Query: 231 IKLVSCCPSLLIGGVDSRFVKVLEKLKEL-GFKNDWIGRYL---PGKGSYNWDQVSETLD 286
I L+ P +L + ++ + + L L G D IG+ L P +Y+ + + E +
Sbjct: 234 IHLIVKHPVILNCDLHNQLIPRIRVLTALSGGDEDSIGKVLNRFPIILNYSVEHLEEHIK 293
Query: 287 FLYKIG-YNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQIL 345
FL ++ Q+ + PA+ +K+ L + GL +E++ L ++ L
Sbjct: 294 FLRCFADLDDQQIFKIVLVFPAIFTSSRERKLRPRIQFLKECGLDADEIFKLLTKAALFL 353
Query: 346 SSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVG--RESL 403
S F NL +G L++IG + V + A SC K V L G E +
Sbjct: 354 SISFRSNLAYKLGVLVKIGYKYRTKELAVAIAASTRISCE-NMQKMVSLFLNYGFSLEDI 412
Query: 404 CQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEK-TEFLLRLGY-----VENSEEVT 457
+ K P L + + E K+D ++ N +D+++ +F LGY +++ E+
Sbjct: 413 FAMSKKHPQILQYHHASLEKKMDYMIEEMN--RDIQELLDFPAYLGYKLDDRIKHRYEIK 470
Query: 458 KALKQFRGRGDQL 470
K L RG+Q+
Sbjct: 471 KDL-----RGEQM 478
>gi|334187254|ref|NP_001190948.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|332661488|gb|AEE86888.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 378
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 187 DYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYEN--LGLSKNTVIKLVSCCPSLLIGG 244
D G + KM + ++ + V AS+ W Y + +G+ + + +VS CP +L
Sbjct: 15 DKGFDDPSIDKMLRKCKQLEKAQSDV-ASENWDYLSNIVGIQERKLPYIVSRCPKILTLR 73
Query: 245 VDSRFVKVLEKLKELGFK----NDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLN 300
+D R + ++E L LG I ++ P +++ L F +G E QL
Sbjct: 74 LDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGK 133
Query: 301 LFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNE-VYSLFSQNPQILSSKFVKNLLQAVGF 359
+ NP L+ K+ V+ L LGL + + + +NP ++ K L F
Sbjct: 134 MILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEF 193
Query: 360 L-IEIGMGMKDISNMVLMHAELM 381
L +G+ I ++V+ +L+
Sbjct: 194 LKSSVGLSEDGIKSVVMNFPQLL 216
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 124/304 (40%), Gaps = 26/304 (8%)
Query: 279 DQVSETLDFLYKI-GYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSL 337
D SE D+L I G E +L + P ++ +++ + L LG EV S
Sbjct: 39 DVASENWDYLSNIVGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASA 98
Query: 338 FSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLK 397
++ P ILS + L + F +G+ + M+L + L+ ++ +KL
Sbjct: 99 ITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISY-------SIDTKLT 151
Query: 398 VGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLL-RLGYVENS-EE 455
V L + D + + K + VD + TEFL +G E+ +
Sbjct: 152 VIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVD----KRLRPTTEFLKSSVGLSEDGIKS 207
Query: 456 VTKALKQF--RGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS-KDVLEKKIDYL 512
V Q R L+ +D L + G + + +V P +L +S K+ L+ +I +L
Sbjct: 208 VVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFL 267
Query: 513 KNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVWLRERGVAKPTL--SLSTILACSDAKF 570
+ ++ V ++P + +H K V R + V K + SL +L C+ KF
Sbjct: 268 VQVMGRGMDEVASYPEFF-------HHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKF 320
Query: 571 EKYF 574
+ F
Sbjct: 321 HEKF 324
>gi|449523790|ref|XP_004168906.1| PREDICTED: uncharacterized LOC101219984 [Cucumis sativus]
Length = 376
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 121/311 (38%), Gaps = 39/311 (12%)
Query: 311 EGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDI 370
E S Q+ + G L G ++ +L S+ P+IL S+ NL FL EIG +
Sbjct: 60 EKSIQQYEAVIGFLKSQGFDNLQIANLVSKRPKILGSRVSTNLKPKFEFLQEIGFVGPLL 119
Query: 371 SNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP-----------LKLFHLAS 419
++L + L GS ++ S+LK L +I++ D L + L
Sbjct: 120 PKLILSNHWLAGS-------SLDSQLKPSFFFLKEILEPDEQVTAAVSRFPGLLICDLKG 172
Query: 420 KTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRG------------ 467
+ ID PS+++ KT L + N + + A+K+ + G
Sbjct: 173 NFKSNIDVLASEGVPSRNIAKTIALNPRAIMLNVDRMINAVKRVKELGLEPKARTFVHAV 232
Query: 468 --------DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYP 519
+++ + + G+ + + KR P L S++ L D+ N
Sbjct: 233 RVVLSMGDSTWKKKINVMKSLGVSEKEIFSAFKRFPPYLTCSEEKLRDVADFCSNTAKLD 292
Query: 520 LESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVH 578
S++++P Y + R+ RCK+ L+ + + K S + EKY V
Sbjct: 293 PASLISYPVLFKYSVHKRLQPRCKVIEVLKMKNLLKIKRIASVFVKGEKEFVEKYIVKHL 352
Query: 579 PEGPAMWESLK 589
E P + + K
Sbjct: 353 DEIPNLMDIYK 363
>gi|302790558|ref|XP_002977046.1| hypothetical protein SELMODRAFT_151682 [Selaginella moellendorffii]
gi|300155022|gb|EFJ21655.1| hypothetical protein SELMODRAFT_151682 [Selaginella moellendorffii]
Length = 346
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 140/364 (38%), Gaps = 94/364 (25%)
Query: 218 WAY-ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSY 276
W+Y E++ + K V +V+ CP LL+ ++ R ++ L+ +G K D I + + S
Sbjct: 62 WSYLESIVVPKRKVTSVVARCPPLLMMPLEERLKPMVMFLQTMGLKRDDIAKTINRYPSI 121
Query: 277 NWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVF-EGSGQKVYVLFGRLLKLGLKMNEVY 335
V E K P L F EG+ G++ +
Sbjct: 122 FMHSVEE-------------------KLCPLLAFLEGAA-------------GVRPERIG 149
Query: 336 SLFSQNPQILSSKFVKNLLQAVGFLIEIGM-GMKDISNMVLMHAELMGSCSLKGPKTVCS 394
L P++LS + L V FL +G+ ++ +V + + G
Sbjct: 150 KLLVLCPRLLSYSIDQKLRPMVDFLCGLGVEPGHELGKLVCSYPNIFG------------ 197
Query: 395 KLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENS- 453
+ + ++ +V + E+L +LG +N
Sbjct: 198 --------------------YSIENRLQVTV----------------EYLRQLGLSKNDL 221
Query: 454 EEVTKALKQFRGRGDQ-LQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS-KDVLEKKIDY 511
+++ R ++ L+ + L+ AGL + + +V P +L +S K ++ K+++
Sbjct: 222 KKIIVCYPHIICRAEKALEPAVNYLLTAGLSAGQITTLVAGFPPILVKSVKRSIQPKVEF 281
Query: 512 LKNYLCYPLESVVAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
L + LE V FPAY + + R I R K L+++G + L +L C+ KF
Sbjct: 282 LMRDMGRGLEEAVEFPAYFGHSLNRKIGPRHK---KLKDQG----AIPLHAMLNCNKKKF 334
Query: 571 EKYF 574
F
Sbjct: 335 TSKF 338
>gi|168008675|ref|XP_001757032.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691903|gb|EDQ78263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 468
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 140/334 (41%), Gaps = 38/334 (11%)
Query: 252 VLEKLKELGFKNDWIGRYL---PGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPAL 308
+++ L++ G + DW+G + PG + + D++ + + F ++G + PA
Sbjct: 148 MVQLLEDAGVRRDWVGVVISRSPGILALSIDELLDKISFFQELGVTPEHFGPMAFNFPAS 207
Query: 309 V--FEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMG 366
V F + + V + R L G+ + + PQ+L+S + + + +G+
Sbjct: 208 VGRFLLTEMQAKVEYMRCL--GMADANIGKAIATRPQLLASDIGNGWVPLIKYFKLLGIQ 265
Query: 367 MKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLK--LFHLASKTEVK 424
I + +H + + K + K++ R I++D + L +
Sbjct: 266 DAGILRIFCVHPSVF---CMNLEKNIAPKVRFFR---AIGIREDAIGQVLVAFPALLSYS 319
Query: 425 IDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGR--GDQLQERFDCLVQAGL 482
+D ++ P F+L V+ EE + R + G L R LV+
Sbjct: 320 LDRKI---RPV-----VRFILEEAGVK--EEHIGKVIALRPQLIGTSLTLRLQPLVKFLR 369
Query: 483 DSNVVR----NIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRI 537
+ + R ++V PM+L + ++E K+ Y K + PLE +V FP Y Y + RI
Sbjct: 370 NHQLKREHTGHMVADFPMLLRYNLAIVESKLRYFKRSMKRPLEDLVLFPRYFSYSLEERI 429
Query: 538 NHRCKMYVWLRERGVAKPTLSLSTILACSDAKFE 571
R ++ L+ G+ L +LAC+D F+
Sbjct: 430 KPRQQI---LKSHGL---VFHLRYMLACNDETFD 457
>gi|186502112|ref|NP_179763.3| transcription termination factor family protein [Arabidopsis
thaliana]
gi|330252119|gb|AEC07213.1| transcription termination factor family protein [Arabidopsis
thaliana]
Length = 641
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 135/371 (36%), Gaps = 100/371 (26%)
Query: 251 KVLEKLKELGFKNDWIGRYLPGKG----SYNWDQVSETLDFLYKIGYNEVQLLNLFKTNP 306
+++E L+ G + DW+G Y+ G+ S++ ++V +DF K+G N+ + P
Sbjct: 283 EIVEYLESNGVRRDWMG-YVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYP 341
Query: 307 ALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSK------------------ 348
++ S Q + L + GL EV L + P ++
Sbjct: 342 KIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIP 401
Query: 349 ------------------FVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPK 390
K + V FL E+G+ + I NM++ L+ + K +
Sbjct: 402 KEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIR 461
Query: 391 TVC----SKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLR 446
V ++ V ++ + ++I DP L C +K + +
Sbjct: 462 PVVIFLLTRAGVTQKDIGKVIAMDPALL---------------GCSIGTKLEPNMRYYIS 506
Query: 447 LGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLE 506
LG +F G+ + + F L++ +D+ L
Sbjct: 507 LGI------------RFYQLGEMIAD-FPMLLRYNVDN--------------------LR 533
Query: 507 KKIDYLKNYLCYPLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPTLSLSTILAC 565
K YL+ + PL+ ++ FP + Y + RI R + V R L +LAC
Sbjct: 534 PKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENR------VNFKLRYMLAC 587
Query: 566 SDAKFEKYFVD 576
+D +FE+ D
Sbjct: 588 TDEEFERRVRD 598
>gi|168012043|ref|XP_001758712.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690322|gb|EDQ76690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 142/328 (43%), Gaps = 38/328 (11%)
Query: 280 QVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLK-LGLKMNEVYSLF 338
++ L FL IG + L + P ++ + + L K +G++ ++ L
Sbjct: 219 ELKSVLTFLETIGVPDESLGRVIVLFPPVLLCDPHRDLQARLRTLKKVIGVRARDLGRLI 278
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVC---SK 395
+ P +LS N+ + V FLI + + DI + +L+G +++ + + +K
Sbjct: 279 VRYPWLLSETAQNNVDELVEFLISVKVPKGDIDRSITACPQLLGCSTIRTLQPMVERMNK 338
Query: 396 LKVGRESLCQIIKDDPLKL------------FHLASKTEVKIDEQVDCQNP---SKDVE- 439
L V + L +I P L F L E K + ++P + DV+
Sbjct: 339 LGVKSKRLGYVIAASPQLLVRTPDEFNEVMNFLLKIGVEEKHLGGMLKRHPGVFASDVKS 398
Query: 440 ----KTEFLLRLGYVENSEEVTKALKQF----RGRGDQLQERFDCLVQAGLDSNVVRNIV 491
K +FL +LG E E + + L+ F R D L+ R L G + V+ ++
Sbjct: 399 VLEPKVQFLRQLGMKE--ELLFRVLRFFPEMLTMRIDSLRSRVKYLQDEGFHNEVICCMI 456
Query: 492 KRAPMVLNQSKD-VLEKKIDYLKNYLCYPLESVVAFPAYLCYDMG-RINHRCKMYVWLRE 549
R P +L+ + + VL+ K+++L N + + VV +P Y Y + +I R ++ + LR+
Sbjct: 457 CRFPPLLSYNPESVLKPKLEFLVNSMGRSIYEVVEYPRYFSYSLEVKIKPRARV-IKLRQ 515
Query: 550 RGVAKPTLSLSTILACSDAKFEKYFVDV 577
SL +L +D +F F V
Sbjct: 516 -----VKCSLREMLHLNDDQFASKFFGV 538
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 222 NLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYNW 278
++ + K + + ++ CP LL ++E++ +LG K+ +G + P
Sbjct: 302 SVKVPKGDIDRSITACPQLLGCSTIRTLQPMVERMNKLGVKSKRLGYVIAASPQLLVRTP 361
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVY---VLFGRLLKLGLKMNEVY 335
D+ +E ++FL KIG E L + K +P VF + V V F R +LG+K ++
Sbjct: 362 DEFNEVMNFLLKIGVEEKHLGGMLKRHPG-VFASDVKSVLEPKVQFLR--QLGMKEELLF 418
Query: 336 SLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMV 374
+ P++L+ + + +L V +L + G + I M+
Sbjct: 419 RVLRFFPEMLTMR-IDSLRSRVKYLQDEGFHNEVICCMI 456
>gi|297736889|emb|CBI26090.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 134/332 (40%), Gaps = 38/332 (11%)
Query: 270 LPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGL 329
LP +++ D++ T+DF +K G++E ++ F +P + + + ++
Sbjct: 72 LPRCMTHSEDKIMATMDF-FKWGWSEEEIRLAFTKSPWCMIYSEDK----IMAKMDFFVN 126
Query: 330 KMNEVYSLFSQNPQILSSKFVKNLL---QAVGFLIEIGMGMKDISNMVLMHAELMGSCSL 386
KM SL + P ++ K ++ V L+ G+ KDIS +VL +
Sbjct: 127 KMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQVLLSKGLINKDISLVVLFES-------- 178
Query: 387 KGPKTVCSK-LKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDV--EKTEF 443
KT + + +E Q+IK L + K V + V N + + + F
Sbjct: 179 -TEKTFLERFVNAYKEEAPQLIK---LMMIGFLRKAPVLQEFGVPKSNIAGLLMNQPMAF 234
Query: 444 LLRLG-YVENSEEVTK------------ALKQFRGRGDQLQER-FDCLVQAGLDSNVVRN 489
++R + EN EEV K A++ R G ER D + G +R
Sbjct: 235 MVRPNLFRENLEEVKKMGSNPSQMKFVIAIQAIRAGGKSSWERKIDIYKRWGWSEEEIRL 294
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
++P + S+D + +D+ N + S+ P + + RI R + L
Sbjct: 295 AFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRIIPRYSVVQVLL 354
Query: 549 ERGVAKPTLSLSTILACSDAKFEKYFVDVHPE 580
+G+ SLS + ++ F FVDV+ E
Sbjct: 355 SKGLISKDFSLSAVFQSTEIMFLHKFVDVYKE 386
>gi|348588403|ref|XP_003479956.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial-like
[Cavia porcellus]
Length = 417
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 72/297 (24%)
Query: 25 VFFPVSNEKTSIMQKQNAFFIPVRVRSFCSSRLTHQPKVS-------------LAESTQP 71
P NE++ MQK IP L P +S +A+ P
Sbjct: 86 TLLPSGNEQSEKMQK-----IPSFDAELSLEELDDLPPLSPLQPISEEEAIQIIADPPLP 140
Query: 72 PASLVASRVSRLARTEAQEVLFDYLHSTRSLGYM-----DAEHISKNSPDFVLNLLSKID 126
PAS L DY+ + +L + D I K+ PD NLL ++D
Sbjct: 141 PASFT---------------LRDYVDHSETLQKLVLLGVDLSKIEKH-PD-AANLLLRLD 183
Query: 127 SGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLC 186
KD+ + L+ F + LGL ++L P L ++ S+D L+N +
Sbjct: 184 FEKDIKQILL-------------FLKDLGLEDNQLGPFLTKNYAIFSED---LENLKIRV 227
Query: 187 DY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPSLL 241
Y ++ + +M A + L ++L ++ L LS LV P LL
Sbjct: 228 AYLQSKNFSKADIAQMVRNAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLL 287
Query: 242 IGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
G ++ V E +K ELGFK + I +P + N +++ET D+++ +
Sbjct: 288 TGSLEP----VKENMKVYRLELGFKRNEIQHMITRIPKMLTANRRKLTETFDYVHNV 340
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 478 VQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRI 537
++ G N +++++ R P +L ++ L + DY+ N + P +V FP + ++
Sbjct: 303 LELGFKRNEIQHMITRIPKMLTANRRKLTETFDYVHNVMSIPHHIIVKFPQIFNTKLLKV 362
Query: 538 NHRCKMYVWL--RERGVAKPT-LSLSTILACSDAKF 570
R V+L + AKP +SL +++ DA F
Sbjct: 363 KERHLFLVYLGRAQYDPAKPNYISLDKLVSIPDAIF 398
>gi|40786473|ref|NP_955419.1| mTERF domain-containing protein 1, mitochondrial precursor [Rattus
norvegicus]
gi|81885262|sp|Q6P6Q6.1|MTER1_RAT RecName: Full=mTERF domain-containing protein 1, mitochondrial;
AltName: Full=Mitochondrial transcription termination
factor 3; Short=mTERF3; Flags: Precursor
gi|38303873|gb|AAH62080.1| MTERF domain containing 1 [Rattus norvegicus]
gi|149066567|gb|EDM16440.1| MTERF domain containing 1, isoform CRA_a [Rattus norvegicus]
Length = 409
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ DV L+R I + F + LGL ++L P L ++ S+D L+N
Sbjct: 158 LSKIEKHPDVANLLLRLNFEKDIKQILLFLKDLGLEDNQLGPFLTKNYAIFSED---LEN 214
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
Y ++ + M A + L ++L ++ L LS LV
Sbjct: 215 LKTRVAYLQSKNFSKTDIACMVKNAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLVVR 274
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLY 289
P LL G ++ V E +K ELGFK++ I +P + N +++ET D+++
Sbjct: 275 LPRLLTGSLEP----VKENMKVYRLELGFKHNEIQHMVTKIPKMLTANKRKLTETFDYVH 330
Query: 290 KI 291
+
Sbjct: 331 NV 332
>gi|356569937|ref|XP_003553150.1| PREDICTED: uncharacterized protein LOC100786128 [Glycine max]
Length = 402
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 471 QERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYL 530
+ RF+ + G + + + ++ P V+ S++ KK+ +L + + E + +P +
Sbjct: 273 ESRFEVYERWGWNREMALQVFRKFPCVMKLSEETFAKKMSFLVKDMGWLSEDIAEYPQVI 332
Query: 531 CYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
Y++ RI R + L+ +G+ + L LS I+ ++ KF + FV
Sbjct: 333 AYNLEKRIIPRFSVIKILKSKGLIENKLHLSAIICITEKKFLENFV 378
>gi|299482519|gb|ADJ19185.1| mitochondrial transcription termination factor [Triticum turgidum]
Length = 491
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 142/373 (38%), Gaps = 61/373 (16%)
Query: 221 ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYN 277
E LG+++ + V P+ L V +++ L+ L I R L P
Sbjct: 135 EKLGVTRARLAAFVRAYPACLHASVAVDLAPIVKALRGLDVDRQDIPRVLERYPDVLGLK 194
Query: 278 WD-QVSETLDFLYKI-GYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVY 335
D +S ++ +L I G + + P + G + + LGL M +
Sbjct: 195 PDGTISTSVAYLVGIVGVAPRDIGPMVTHYPFFLSMRVGTTIKPFCDYITSLGLPMRILA 254
Query: 336 SLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSK 395
+ + P IL + + V L+ G+ + + M+ + ++G
Sbjct: 255 RIIEKRPYILGYDLEETVKPNVEALLSFGIRKEVLPLMIAQYPSILGL------------ 302
Query: 396 LKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEE 455
PLK+ A + + ++D ++ VEK L+ L +
Sbjct: 303 ---------------PLKVKLAAQQYFFNLKLKMDPDGFARAVEKLPQLVSL----HQNV 343
Query: 456 VTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNY 515
+ K ++ RGRG D ++ R ++ R P +L ++++ + K+
Sbjct: 344 ILKPVEFLRGRGIT-------------DDDIGRMLI-RCPQILLLRNELMKNSFYFFKSE 389
Query: 516 LCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKY- 573
L P+ ++ +P Y Y + RI R Y+ + +G+ SL L CSD +FE+
Sbjct: 390 LKRPISELLEYPEYFTYSLESRIKPR---YMRVASKGI---RCSLDWFLNCSDQRFEERM 443
Query: 574 ---FVDVHPEGPA 583
F++ GP+
Sbjct: 444 RGDFIEGDAPGPS 456
>gi|18410540|ref|NP_565080.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|12323819|gb|AAG51878.1|AC079678_8 unknown protein; 33994-35331 [Arabidopsis thaliana]
gi|332197431|gb|AEE35552.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 445
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 25/264 (9%)
Query: 323 RLLK-LGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELM 381
R+LK LG + V + S P +L ++ + + + FL+ IG+ +I + E++
Sbjct: 152 RVLKSLGFCDSTVSRILSSFPGVLLVNEIE-IRRKIEFLVGIGIARDNIERFFHVFPEVL 210
Query: 382 GSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKT 441
G +G E+ + + D+ +K+ SK +VK + + + ++ +
Sbjct: 211 G---------------IGTETRLKPLLDEFMKMGF--SKDDVKKEIAREPRVLGLELGEL 253
Query: 442 EFLLRLGYVENSEEVTK----ALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMV 497
L L EV + + FR G +++ R DCL + GL +V + P V
Sbjct: 254 PRCLELINTLKCREVIRVSIISEGAFRA-GFEVKLRVDCLCKYGLIRRDAFKVVWKEPRV 312
Query: 498 LNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPT 556
+ + +EKKI++L N + + + + P YL ++ + I R + +L+ +G
Sbjct: 313 ILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCD 372
Query: 557 LSLSTILACSDAKFEKYFVDVHPE 580
+ L ++ S +F +V +PE
Sbjct: 373 IGLKGLIKPSMKRFYNLYVMPYPE 396
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 91/246 (36%), Gaps = 47/246 (19%)
Query: 139 LRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKM 198
LR PI F + LS L+P+ H +LL N +L YG P S +
Sbjct: 11 LRDYPITLFN---QIRSLSSRILTPINQSHY----RKRILLAN--LLQRYGFPPSSLQHF 61
Query: 199 YVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLL----------------- 241
+ D L +L + + +++ L+S CP++L
Sbjct: 62 LSRNNHLLNSDLVETEISLGILLSLKIPQKSLVSLISDCPNVLRSEFLRKWRVPLSNCGK 121
Query: 242 ------------------IGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYNWDQ 280
IG +F + + LK LGF + + R L PG N +
Sbjct: 122 HGVVSSSAIKSVLEHSSRIGIGPDKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVNEIE 181
Query: 281 VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQ 340
+ ++FL IG + F P ++ G+ ++ L +K+G ++V ++
Sbjct: 182 IRRKIEFLVGIGIARDNIERFFHVFPEVLGIGTETRLKPLLDEFMKMGFSKDDVKKEIAR 241
Query: 341 NPQILS 346
P++L
Sbjct: 242 EPRVLG 247
>gi|297841027|ref|XP_002888395.1| hypothetical protein ARALYDRAFT_894067 [Arabidopsis lyrata subsp.
lyrata]
gi|297334236|gb|EFH64654.1| hypothetical protein ARALYDRAFT_894067 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
+VKR P + S ++++KK +YL + +PL++V + P + Y + R RC + L
Sbjct: 268 MVKRFPQCIGFSTELVKKKTEYLVKEMNWPLKAVASIPQVVGYSLEKRTVPRCNVIKVLI 327
Query: 549 ERGVAKPTL-SLSTILACSDAKFEKYFVDVHPE 580
+G+ + L ++S++L + KF +V H +
Sbjct: 328 SKGLLESELPAISSVLTSTSEKFLNCYVRKHDD 360
>gi|297744449|emb|CBI37711.3| unnamed protein product [Vitis vinifera]
Length = 354
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 114/265 (43%), Gaps = 12/265 (4%)
Query: 150 FFESLGLSQSELSPLLPR--HLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFR 207
+ ++G+ ++ ++ + ++ L +E ++ L G S++ + I
Sbjct: 72 YLRTIGIQDRKIPSIVTKCPKILALGLNEKIVPMVQCLATLGTKPSEVASAIAKFPHILS 131
Query: 208 HD-RGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGF-KNDW 265
H L L ++ LG+ + + K++ P L+ ++S+ ++++ L LGF +
Sbjct: 132 HSVEEKLCPLLAFFQALGVPEKQLGKVILVNPRLISYSIESKLTQIVDFLASLGFTREGM 191
Query: 266 IGRYL---PGKGSYNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLF 321
IG+ L P Y+ D+ + T +FL IG E L + P + + + +
Sbjct: 192 IGKVLQKYPFIMGYSVDKRLRPTSEFLKLIGLTEQDLQKVAMNFPEVFCRDANKILSPNV 251
Query: 322 GRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELM 381
L + G + ++ +L S P IL +L + FL+E+ MK N V+ + +
Sbjct: 252 AYLKRRGFEDGQIAALVSGYPPILIKSIKNSLEPRIRFLVEV---MKRDINEVVNYPDFF 308
Query: 382 GSCSLKGPKTVCSKLKVGRESLCQI 406
C LK + KL R+ C +
Sbjct: 309 -RCGLKKTLELRQKLLEQRKIECSL 332
>gi|293334719|ref|NP_001169565.1| uncharacterized protein LOC100383444 [Zea mays]
gi|224030121|gb|ACN34136.1| unknown [Zea mays]
gi|414886548|tpg|DAA62562.1| TPA: putative mitochondrial transcription termination factor family
protein [Zea mays]
Length = 612
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/328 (17%), Positives = 147/328 (44%), Gaps = 37/328 (11%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
+ + +DFL IG + ++ ++ P ++ + K G++ + + +
Sbjct: 279 NHLEPLVDFLEHIGIPKPKIASVLLLFPPIILSDVENDIKPRIREWEKAGIEHDYITRML 338
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCS--LKGPKTVCSKL 396
+ P ILS+ ++N + + F + G+ ++ V ++GS S + + L
Sbjct: 339 LKYPWILSTSVIENYSKMLLFFNQKGISSTVLAIAVKSWPHILGSSSKRMNSVLELFRVL 398
Query: 397 KVGRESLCQIIKDDPLKLFHLASK--------TEVKIDEQVD----CQNP---SKDVEKT 441
+ ++ + +I P L + E+ +D++ C++P + +V+ T
Sbjct: 399 GISKKMVVPVITSSPQLLLRKPDQFMQNVLFFREMGVDKKTTGKILCRSPEIFASNVDNT 458
Query: 442 -----EFLLRLGYVENSEEVTKALKQF-----RGRGDQLQERFDCLVQAGLDSNVVRNIV 491
+FL+ G + + + ++++ L R + L++ GL + +++
Sbjct: 459 LKKKIDFLINFGV--SKHHLPRIIRKYPELLLLDLNCTLLPRINYLLEMGLSKKDLCSMI 516
Query: 492 KR-APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRE 549
R +P++ + V++ K+++L + PL++VV +P Y Y + G+I R + L+
Sbjct: 517 SRFSPLLGYSIELVMKPKLEFLLRTMKKPLKAVVEYPRYFSYSLEGKIKPR---FWLLQS 573
Query: 550 RGVAKPTLSLSTILACSDAKFEKYFVDV 577
R + +L+ +LA +D F + ++++
Sbjct: 574 RNI---DCTLTEMLAKNDELFAEEYLEL 598
>gi|225428362|ref|XP_002280082.1| PREDICTED: uncharacterized protein LOC100252027 [Vitis vinifera]
Length = 331
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 114/265 (43%), Gaps = 12/265 (4%)
Query: 150 FFESLGLSQSELSPLLPR--HLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFR 207
+ ++G+ ++ ++ + ++ L +E ++ L G S++ + I
Sbjct: 49 YLRTIGIQDRKIPSIVTKCPKILALGLNEKIVPMVQCLATLGTKPSEVASAIAKFPHILS 108
Query: 208 HD-RGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGF-KNDW 265
H L L ++ LG+ + + K++ P L+ ++S+ ++++ L LGF +
Sbjct: 109 HSVEEKLCPLLAFFQALGVPEKQLGKVILVNPRLISYSIESKLTQIVDFLASLGFTREGM 168
Query: 266 IGRYL---PGKGSYNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLF 321
IG+ L P Y+ D+ + T +FL IG E L + P + + + +
Sbjct: 169 IGKVLQKYPFIMGYSVDKRLRPTSEFLKLIGLTEQDLQKVAMNFPEVFCRDANKILSPNV 228
Query: 322 GRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELM 381
L + G + ++ +L S P IL +L + FL+E+ MK N V+ + +
Sbjct: 229 AYLKRRGFEDGQIAALVSGYPPILIKSIKNSLEPRIRFLVEV---MKRDINEVVNYPDFF 285
Query: 382 GSCSLKGPKTVCSKLKVGRESLCQI 406
C LK + KL R+ C +
Sbjct: 286 -RCGLKKTLELRQKLLEQRKIECSL 309
>gi|189217605|ref|NP_001121256.1| uncharacterized protein LOC100158338 [Xenopus laevis]
gi|115528233|gb|AAI24862.1| LOC100158338 protein [Xenopus laevis]
Length = 418
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 32/186 (17%)
Query: 118 VLNLLSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEV 177
V LL K+D KDVT L+ F + +G+ L L R+ L++D
Sbjct: 176 VATLLLKVDFEKDVTPILL-------------FLKDVGVEDDHLGAFLTRNPFILNED-- 220
Query: 178 LLDNFHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIK 232
L+N Y + + +M +A + L ++L ++ LGLS
Sbjct: 221 -LENLQKRVSYLRKKEFNKEAVARMVAKAPYLLNFSVERLDNRLGFFQRELGLSTEKTRD 279
Query: 233 LVSCCPSLLIGGVDSRFVKVLEKLK----ELGFKND---WIGRYLPGKGSYNWDQVSETL 285
L+ P L+ G ++ V E LK ELGFK + I +P S N +++ET
Sbjct: 280 LIIRLPRLITGSLEP----VRENLKVCEIELGFKKNEIQHIATKVPKMLSANKKKLTETF 335
Query: 286 DFLYKI 291
D+++ I
Sbjct: 336 DYVHNI 341
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 476 CLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMG 535
C ++ G N +++I + P +L+ +K L + DY+ N + P +V FP +
Sbjct: 302 CEIELGFKKNEIQHIATKVPKMLSANKKKLTETFDYVHNIMGIPHHLIVKFPQVFNSKLL 361
Query: 536 RINHRCKMYVWLRERGVAKPT----LSLSTILACSDAKF 570
+I R +++ R V PT +SL + + D F
Sbjct: 362 KIKER-HLFLKFLGRAVYDPTKPNYVSLDKLTSSPDEIF 399
>gi|255636600|gb|ACU18638.1| unknown [Glycine max]
Length = 401
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 124/300 (41%), Gaps = 16/300 (5%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
DQ + L+ L G++E+QL L K P ++ + + L +GL +++ L
Sbjct: 90 DQPNAVLNLLKTFGFSELQLSLLVKRFPIVLKIKPEKTILSKLQFFLSIGLSTSDLPKLL 149
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKV 398
N +L L+ L + ++D +VL + + +G + + L
Sbjct: 150 IGNSVLLEGSLKYCLVPRYNILSTV---LRDRDKVVLALKRVPWCLTGRG---LINHLIP 203
Query: 399 GRESLCQI-IKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVT 457
E L + + P+ HL V C +K VE E +++ G+
Sbjct: 204 NVEHLRGVGVPQGPIA--HLVCN-----HLGVVCVEHTKFVEAVEKVVKFGFDPMKTMFV 256
Query: 458 KALKQFRGRGDQLQE-RFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYL 516
+A+K G + E R + + G + + +R P + S+D + + + +L +
Sbjct: 257 EAVKVVVGTSKEAWEKRVEVYERWGWSNEMCLCAFRRYPQCMLMSEDKVMRTMRFLVKDM 316
Query: 517 CYPLESVVAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
+P E + P L ++ + I R ++ L+ERG+ K LS+ + ++ F + FV
Sbjct: 317 GWPAEDIFRTPGVLSPNLEKTIMPRSRVMKVLKERGLVKSDSRLSSAILITEKLFLEKFV 376
>gi|255576320|ref|XP_002529053.1| conserved hypothetical protein [Ricinus communis]
gi|223531533|gb|EEF33364.1| conserved hypothetical protein [Ricinus communis]
Length = 508
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 175 DEVLLDN-----FHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNT 229
+E+ LDN LC +G+ S +MY + + +L ++G+
Sbjct: 188 EEIDLDNRWLPLLDYLCTFGLKESDFIQMYERHMPSLQINVSSAQERLEYLLSVGVKHRD 247
Query: 230 VIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYN-WDQVSETL 285
+ +++ P +L VD+ + L LG N IG+ + P SY+ + + T+
Sbjct: 248 IRRILLRQPQILEYTVDNNLKSHVAFLSSLGIPNSRIGQIIAVTPSLFSYSVQNSLKPTV 307
Query: 286 DFLYK-IGYNEVQLLNLFKTNPALVFEG---SGQKVYVLFGRLLKLGLKMNEVYSLFSQN 341
+L + +G NE + + + +P ++ + S Y+ + +LG V + +++
Sbjct: 308 RYLVEELGINEKNIGKVVQLSPQILVQRIDISWNTRYIFLSK--ELGASKESVVKMVTKH 365
Query: 342 PQILSSKFVKNLLQAVGFLIEIGMGMKDI 370
PQ+L + + FL IGM DI
Sbjct: 366 PQLLHYSIDDGFVPRINFLRSIGMRNSDI 394
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Query: 121 LLSKIDSGKDVTRSLMR---FLRY---NPINEFEPFFESLGLSQSELSPLL---PRHLMF 171
LLS +D+ R L+R L Y N + F SLG+ S + ++ P +
Sbjct: 238 LLSVGVKHRDIRRILLRQPQILEYTVDNNLKSHVAFLSSLGIPNSRIGQIIAVTPSLFSY 297
Query: 172 LSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIF--RHDRGVLASKLWAYENLGLSKNT 229
+ + +++ + GI +GK+ + +I R D ++ + LG SK +
Sbjct: 298 SVQNSLKPTVRYLVEELGINEKNIGKVVQLSPQILVQRIDISWNTRYIFLSKELGASKES 357
Query: 230 VIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL 270
V+K+V+ P LL +D FV + L+ +G +N I + L
Sbjct: 358 VVKMVTKHPQLLHYSIDDGFVPRINFLRSIGMRNSDILKVL 398
>gi|222642083|gb|EEE70215.1| hypothetical protein OsJ_30328 [Oryza sativa Japonica Group]
Length = 633
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 145/334 (43%), Gaps = 49/334 (14%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
+ + +DFL IG + ++ ++ + P ++ + K+G++ + +
Sbjct: 279 NHLKPLIDFLQYIGIPKPRIASVLLSFPPIILSDVENDIKPRINAWEKVGIEQEYIGRML 338
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHA-----ELMGSCSLKGPKTVC 393
+ P ILS+ ++N Q + F + IS+ VL A ++G CS K ++
Sbjct: 339 LKYPWILSTCVLENYGQMLMFFQR-----RKISSTVLGVAMRSWPHILG-CSTKRMNSIV 392
Query: 394 S---KLKVGRESLCQIIKDDP------------LKLFHLASKTEVKIDEQVDCQNP---S 435
L + ++ L ++ P + LF + K ++ C++P +
Sbjct: 393 ELFDDLGISKKMLVPVVTSSPQLLLRKPNEVMQIILFFKDMGLDKKTVAKILCRSPEIFA 452
Query: 436 KDVEKT-----EFLLRLGYVENSEEVTKALKQFR-----GRGDQLQERFDCLVQAGLDS- 484
VE T FL+ G ++ + + ++++ + R + L+ GL
Sbjct: 453 SSVENTLKKKINFLIDFGVPKHY--LPRIIRKYPELLLLDINRTMLPRINYLLDMGLSKK 510
Query: 485 NVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKM 543
NV I + +P++ + V++ K+++L + PL++VV +P Y Y + GRI R
Sbjct: 511 NVCSMIYRFSPLLGYSIELVMKPKLEFLLRTMKKPLKAVVEYPRYFSYSLEGRIKPR--- 567
Query: 544 YVWLRERGVAKPTLSLSTILACSDAKFEKYFVDV 577
+ L+ R + SL+ +LA +D F + ++ V
Sbjct: 568 FCVLQSRKI---DCSLTDMLAKNDELFAEEYLGV 598
>gi|356557195|ref|XP_003546903.1| PREDICTED: uncharacterized protein LOC100802127 [Glycine max]
Length = 592
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 165 LPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLG 224
PR L+ LS D H L ++GIP ++ + + + D +L ++L ++ +
Sbjct: 249 FPR-LLQLSVDNHFTPILHFLHNFGIPTFRISNIILAFPPLLFWDLQLLQTRLLVFKEID 307
Query: 225 LSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYNWDQV 281
L KL+ P LL + + ++L + I R + P S + ++
Sbjct: 308 LPDKDYAKLLLKYPWLLSTSIQENYTELLAFSYSIKVPKTQIDRAIESHPHLLSCSTSKL 367
Query: 282 SETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQ--KVYVLF----------GRLL---- 325
+D ++G +L + +P L+ ++ +LF GR+L
Sbjct: 368 KSMVDQFAELGVRNKKLNQVIAKSPQLLLRKPKDFLQIVLLFENMGFDKETIGRILARCP 427
Query: 326 -------------------KLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMG 366
++G+ + + + P++L S K LLQ + +L+++G+
Sbjct: 428 EIFAASINKTLQRKIEFLGRVGVSKTFLPGVIRKYPELLVSDIDKTLLQRIMYLMKLGLS 487
Query: 367 MKDISNMVLMHAELMG 382
KDI+ MV + L+G
Sbjct: 488 EKDIAYMVRTFSPLLG 503
>gi|297842169|ref|XP_002888966.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp.
lyrata]
gi|297334807|gb|EFH65225.1| hypothetical protein ARALYDRAFT_476555 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 463 FRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLES 522
FR G +++ R DCL + GL +V + P V+ + +EKKI++L N + + +
Sbjct: 283 FRA-GFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINC 341
Query: 523 VVAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEG 581
+ P YL ++ + I R + +L+ +G + L ++ S +F +V +PE
Sbjct: 342 LADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVKPYPEC 401
Query: 582 PAMWESLKKSS 592
++ K+++
Sbjct: 402 ERIFGKRKENA 412
>gi|354499043|ref|XP_003511621.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial
[Cricetulus griseus]
Length = 415
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ D L+R I + F + LGL ++L P L ++ S+D L+N
Sbjct: 164 LSKIERHVDAANLLLRLDFEKDIKQILLFLKDLGLEDNQLGPFLTKNYSIFSED---LEN 220
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
Y ++ + +M A + L ++L ++ L LS LV
Sbjct: 221 LKTRVAYLQSKNFTKADIARMVRNAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLVVR 280
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLY 289
P LL G ++ V E +K ELGFK + I +P + N +++ET D+++
Sbjct: 281 LPRLLTGSLEP----VKENMKVYRLELGFKQNEIQHMVTRIPKMLTANKRKLTETFDYIH 336
Query: 290 KI 291
+
Sbjct: 337 NV 338
>gi|125540188|gb|EAY86583.1| hypothetical protein OsI_07963 [Oryza sativa Indica Group]
Length = 454
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 130/299 (43%), Gaps = 34/299 (11%)
Query: 281 VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQ 340
+ E + +L +G + ++ N+ + PA + +K+ L LL+LG+ + + + +
Sbjct: 172 LPELVLYLLDLGMDHEEIKNVVRKFPAFAYYNVDRKIKPLVALLLELGVPRSNIPGIIKK 231
Query: 341 NPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVC--SKLKV 398
PQ+ NL + +L +G+ S ++ L+ K TV ++L V
Sbjct: 232 RPQLCGISLSDNLKPMMTYLENVGINKDQWSKVLSRFPALLTYSRQKVETTVSFLTELGV 291
Query: 399 GRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTK 458
+E++ +I+ P H+ S + D P+ E+ +G + + + K
Sbjct: 292 PKENIGKILTRCP----HIMSYS------VNDNLRPT-----AEYFQSIG-ADAASLIQK 335
Query: 459 ALKQFRGRGDQLQERFDCLVQAGLDSNV----VRNIVKRAPMVLNQS-KDVLEKKIDYLK 513
+ + F G ++ + + + L+ + + + R ++ S +D L K +Y
Sbjct: 336 SPQAF---GLNIEAKLKPITEFFLERDFTMEEIGTMANRFGIIHTLSMEDNLLPKYEYFL 392
Query: 514 NYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFE 571
+ YP +V FP Y Y + RI R Y + + GV L L+ +L+ SD++FE
Sbjct: 393 T-MGYPRNELVKFPQYFGYSLEQRIKPR---YARMIDCGV---RLILNQLLSVSDSRFE 444
>gi|334326077|ref|XP_001379738.2| PREDICTED: mTERF domain-containing protein 1, mitochondrial-like
[Monodelphis domestica]
Length = 410
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 478 VQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRI 537
+Q G N ++++V R P +L SK L + DY+ N + P +V FP + R+
Sbjct: 296 LQLGFKHNEIQHMVTRIPKILTASKRKLTETFDYVHNVMHIPHHLIVKFPQVFNSKLLRV 355
Query: 538 NHRCKMYVWL--RERGVAKPT-LSLSTILACSDAKF 570
R +L + KP +SL +++ D +F
Sbjct: 356 KERNSFLTYLGRAQYDPQKPNYISLDKLVSIPDEEF 391
>gi|413949341|gb|AFW81990.1| putative mitochondrial transcription termination factor family
protein [Zea mays]
Length = 271
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 477 LVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-G 535
L G + V +V P +L + D++ +Y KN + LE +V FPA+ Y +
Sbjct: 135 LTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTYGIES 194
Query: 536 RINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
+ R +M + +G+ T SL+ +L CSDAKF++
Sbjct: 195 TVRPRHEM---VSRKGL---TCSLAWLLNCSDAKFDE 225
>gi|226505334|ref|NP_001152167.1| EMB2219 [Zea mays]
gi|195653425|gb|ACG46180.1| EMB2219 [Zea mays]
Length = 611
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 116 DFVLNLLSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR--HLMFLS 173
DF+ +L+ + G + RS + + E + ESLG+ + + ++ R L+ LS
Sbjct: 224 DFLGRVLA--NGGSFLNRS------FEELEEIIGYLESLGVRRDWIGYVVSRCPQLLSLS 275
Query: 174 DDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLA-----SKLWAYENLGLSKN 228
DE L D G+ G M + + G L+ SK+ + GLS
Sbjct: 276 MDE-LETRVRFYTDLGMDEKDFGTMVYDYPRVL----GFLSLEEMNSKVQYLKEFGLSTE 330
Query: 229 TVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---PGKGSYNWDQV-SET 284
+ +L++ P L+ ++ R++ +++ L L D + R L P + + V +
Sbjct: 331 ELGRLLAFKPQLMACSIEERWMPLVKYLYHLNISRDGMKRMLMVQPTIFCLDLETVIAPK 390
Query: 285 LDFLYKIGYNEVQLLN-LFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
+ FL IG + N L K P L + + V+ L K G+K +++ + + +PQ
Sbjct: 391 VQFLIDIGVRSDAIGNVLAKFPPVLTYSLYKKIRPVVIFLLTKGGVKQDDIGKVIALDPQ 450
Query: 344 ILSSKFVKNLLQAVGFLIEIGM 365
+L L +V + +G+
Sbjct: 451 LLGCSIAHKLEVSVKYFRSLGI 472
>gi|356567458|ref|XP_003551936.1| PREDICTED: uncharacterized protein LOC100778090 [Glycine max]
Length = 402
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 124/300 (41%), Gaps = 16/300 (5%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
DQ + L+ L G++E+QL L K P ++ + + L +GL +++ L
Sbjct: 91 DQPNAVLNLLKTFGFSELQLSLLVKRFPIVLKIKPEKTILPKLQFFLSIGLSTSDLPKLL 150
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKV 398
N +L L+ L + ++D +VL + + +G + + L
Sbjct: 151 IGNSVLLEGSLKYCLVPRYNILSTV---LRDRDKVVLALKRVPWCLTGRG---LINHLIP 204
Query: 399 GRESLCQI-IKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVT 457
E L + + P+ HL V C +K VE E +++ G+
Sbjct: 205 NVEHLRGVGVPQGPIA--HLVCN-----HLGVVCVEHTKFVEAVEKVVKFGFDPMKTMFV 257
Query: 458 KALKQFRGRGDQLQE-RFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYL 516
+A+K G + E R + + G + + +R P + S+D + + + +L +
Sbjct: 258 EAVKVVVGTSKEAWEKRVEVYERWGWSNEMCLCAFRRYPQCMLMSEDKVMRTMRFLVKDM 317
Query: 517 CYPLESVVAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
+P E + P L ++ + I R ++ L+ERG+ K LS+ + ++ F + FV
Sbjct: 318 GWPAEDIFRTPGVLSPNLEKTIMPRSRVMKVLKERGLVKSDSRLSSAILITEKLFLEKFV 377
>gi|302756925|ref|XP_002961886.1| hypothetical protein SELMODRAFT_77318 [Selaginella moellendorffii]
gi|300170545|gb|EFJ37146.1| hypothetical protein SELMODRAFT_77318 [Selaginella moellendorffii]
Length = 324
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 124/320 (38%), Gaps = 55/320 (17%)
Query: 277 NWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVY 335
N D+ V +++L IG + NP ++ + L LG + V
Sbjct: 49 NLDKSVINKVEYLKGIGVQRAHAKRIILKNPRVLAYSLESNIIPKVEFLDGLGFRRKSVG 108
Query: 336 SLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCS- 394
+L + PQ+LS L + FL+ +G+ +++++ ++ E MG L KT +
Sbjct: 109 ALLCKCPQLLSDMVSTCLRRKANFLLFLGVKSSQLADIMYVYPEFMG-LKLDEVKTRLAF 167
Query: 395 --KLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVEN 452
L+V + L ++ P + + T+VK P + K+ LG+
Sbjct: 168 YKSLRVEQHDLATMLTKHP-AIMNYDINTQVK---------PVIEYFKSS----LGFT-- 211
Query: 453 SEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDV-LEKKIDY 511
T+ L F ++R P VL +S + + +Y
Sbjct: 212 ----TRGLAAF---------------------------LRRRPSVLGESVEFRVMATTEY 240
Query: 512 LKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
L + ++ ++ FP + YD+ R+ R ++ WL+ + + K L F
Sbjct: 241 LLKDMQLDMDELLKFPQFFGYDLEDRVKPRHRLVAWLKAKHIIKQDYP-PCYLHMRRQVF 299
Query: 571 EKYFVDVHPEGPAMWESLKK 590
E F+D HPE ++ K+
Sbjct: 300 EDMFLDCHPEARDIFRGYKE 319
>gi|297795387|ref|XP_002865578.1| hypothetical protein ARALYDRAFT_917622 [Arabidopsis lyrata subsp.
lyrata]
gi|297311413|gb|EFH41837.1| hypothetical protein ARALYDRAFT_917622 [Arabidopsis lyrata subsp.
lyrata]
Length = 148
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 458 KALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLC 517
K L R Q+ + + G + +VK P + S ++++KK +++ +
Sbjct: 6 KNLLCLRASEQQILNSMETFIGLGFSRDEFVMMVKCFPQCIGYSAEMVKKKTEFVVKKMN 65
Query: 518 YPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTL-SLSTILACSDAKF 570
+PL+ + FP L Y M RI RC + L +G L ++++LAC+D F
Sbjct: 66 WPLKVMTLFPQVLGYSMEKRIVPRCNVIKALMSKGSLGSELPPMASVLACTDLTF 120
>gi|12325131|gb|AAG52507.1|AC016662_1 unknown protein, 5' partial; 35-1255 [Arabidopsis thaliana]
Length = 404
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 323 RLLK-LGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELM 381
R+LK LG + V + S P +L ++ + + + FL+ IG+ +I + E++
Sbjct: 113 RVLKSLGFCDSTVSRILSSFPGVLLVNEIE-IRRKIEFLVGIGIARDNIERFFHVFPEVL 171
Query: 382 GSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKT 441
G +G E+ + + D+ +K+ SK +VK K++ +
Sbjct: 172 G---------------IGTETRLKPLLDEFMKMGF--SKDDVK-----------KEIARE 203
Query: 442 EFLLRLGYVENSEEVTKALK-------------QFRGRGDQLQERFDCLVQAGLDSNVVR 488
L + E+ LK FR G +++ R DCL + GL
Sbjct: 204 REFLVWSELPRCLELINTLKCREVIRVSIISEGAFRA-GFEVKLRVDCLCKYGLIRRDAF 262
Query: 489 NIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGR-INHRCKMYVWL 547
+V + P V+ + +EKKI++L N + + + + P YL ++ + I R + +L
Sbjct: 263 KVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYL 322
Query: 548 RERGVAKPTLSLSTILACSDAKFEKYFVDVHPE 580
+ +G + L ++ S +F +V +PE
Sbjct: 323 KLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPE 355
>gi|168054084|ref|XP_001779463.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669148|gb|EDQ55741.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 283
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 223 LGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKND-W--IGRYLPGKGSYNWD 279
+G+ K+ V K+ P L +D+ + L+ LG + D W I P +Y+
Sbjct: 32 MGVPKSDVPKIAVKRPQLFGCSLDN-IKPTVALLEGLGVEPDRWPKILASFPHILTYSAA 90
Query: 280 QVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFS 339
+V + + FL IG + + + P +V + +K+ + +G+ +V +L
Sbjct: 91 KVDQVVKFLADIGMSPEESGRILTRFPHIVGYSTQEKLRPILNHFYSIGI--TDVKTLVL 148
Query: 340 QNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSK---- 395
++PQIL +N+ + F ++G ++I+ ++L +++G +++G + SK
Sbjct: 149 RSPQILGLSLEENIKPTLQFFTDVGYSKEEINTIILRFPQILG-LNIEG--NLRSKWMYF 205
Query: 396 LKVGRESLCQII 407
L++GRES I+
Sbjct: 206 LQMGRESNADIV 217
>gi|255547153|ref|XP_002514634.1| conserved hypothetical protein [Ricinus communis]
gi|223546238|gb|EEF47740.1| conserved hypothetical protein [Ricinus communis]
Length = 450
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 78/415 (18%), Positives = 159/415 (38%), Gaps = 66/415 (15%)
Query: 183 HVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLI 242
++ YG P S++ + + + L + + + ++ L++ CPS+L
Sbjct: 52 NIFQRYGFPPSQLHSFISANHFLLNSNLHDIEKSLGILLSFKIPQKVLVSLITECPSIL- 110
Query: 243 GGVDSRFVKV----LEKLKELGFKNDWIGRYLPGKGSY--NWDQVSETLDFLYKIGYNEV 296
D F+K K ++L I L + + D+ + + L + +++
Sbjct: 111 ---DFEFLKTWKICFSKYRDLSISPLVIKSVLAHSKRFQIDPDEFEKNANVLKGLSFSQG 167
Query: 297 QLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQA 356
+ + + P ++ + +Y L++ G+ +EV S+FS P
Sbjct: 168 TIRRVLEDFPGVITMKRSE-IYSRIEFLMRTGIPKDEVESIFSSFP-------------- 212
Query: 357 VGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFH 416
+ +G G+K+ ++ + E G L RE + + IK +P L
Sbjct: 213 ----LALGFGIKN--RLMPLIDEFEG-------------LGFSRELVIKEIKKEPQILGM 253
Query: 417 LASKTEVKID--EQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERF 474
+ +D + C+ P K ++ R G+ +++ +
Sbjct: 254 ELGELSRCLDLLNSLKCREPIKLKILSDGAFRAGF-------------------EVKLKV 294
Query: 475 DCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM 534
D L + GL ++ + P V+ + +EKKI +L N + + + +V P YL
Sbjct: 295 DYLCKHGLIRREAFKVLWKEPRVIIYDLEDIEKKIQFLVNTMRFNVGCLVDVPEYLGVSF 354
Query: 535 GR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESL 588
+ I R + +LR RG + L ++ S KF +V +PE M+ L
Sbjct: 355 EKQIVPRYNVIEYLRARGGLGDEVGLKGMMKLSRLKFYNLYVKPYPECGKMFGRL 409
>gi|222623189|gb|EEE57321.1| hypothetical protein OsJ_07418 [Oryza sativa Japonica Group]
Length = 568
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 287 FLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILS 346
+L +G + ++ N+ + PA + +K+ L LL+LG+ + + + + PQ+
Sbjct: 292 YLLDLGMDHEEIKNVVRKFPAFAYYNVDRKIKPLVALLLELGVPRSNIPGIIKKRPQLCG 351
Query: 347 SKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVC--SKLKVGRESLC 404
NL + +L +G+ S ++ L+ K TV ++L V +E++
Sbjct: 352 ISLSDNLKPMMTYLENVGINKDKWSKVLSRFPALLTYSRQKVETTVSFLTELGVPKENIG 411
Query: 405 QIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFR 464
+I+ P H+ S + D P+ E+ +G + + + K+ + F
Sbjct: 412 KILTRCP----HIMSYS------VNDNLRPT-----AEYFQSIG-ADAASLIQKSPQAF- 454
Query: 465 GRGDQLQERFDCLVQAGLDSNV----VRNIVKRAPMVLNQS-KDVLEKKIDYLKNYLCYP 519
G ++ + + + L+ + + + R ++ S +D L K +Y + YP
Sbjct: 455 --GLNIEAKLKPITEFFLERDFTMEEIGTMANRFGIIHTLSMEDNLLPKYEYFLT-MGYP 511
Query: 520 LESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFE 571
+V FP Y Y + RI R Y + + GV L L+ +L+ SD++FE
Sbjct: 512 RNELVKFPQYFGYSLEQRIKPR---YARMIDCGV---RLILNQLLSVSDSRFE 558
>gi|225438047|ref|XP_002271767.1| PREDICTED: uncharacterized protein LOC100251440 [Vitis vinifera]
Length = 478
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 109/266 (40%), Gaps = 17/266 (6%)
Query: 327 LGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSL 386
+G V S+ S +P +L K L+ FL + + +D + VL + S +L
Sbjct: 191 MGFSSARVASMLSPDPSLLGRSLEKVLIPKYNFLKSVHISNED-AIKVLRRSSWSSSGNL 249
Query: 387 KGPKTVCSKLKVGRESLCQIIKDDPL-KLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLL 445
+ + + + + V RE+ I + L +H S K E V K VE L
Sbjct: 250 E--RNIAANIAVLRETGVPISRISYLVTRYHAISLRSDKFSENVK-----KVVEMGFNPL 302
Query: 446 RLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVL 505
+ +++ + + + R Q++ + + G + + + +R P + S+ +
Sbjct: 303 KFTFLDALQAFCQTTESTR------QQKMEMYRRWGWSEDEILSAFRRRPQCMQLSEKKV 356
Query: 506 EKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILA 564
K +D+L N + + V P +C + R+ RC + L +G+ K L L T L
Sbjct: 357 NKVLDFLVNKMGWQPAVVARAPVAICLNFEKRVVPRCSVVKVLLLKGLIKKDLKLGTFLN 416
Query: 565 CSDAKF-EKYFVDVHPEGPAMWESLK 589
F +KY + + P + + K
Sbjct: 417 LPVGDFLDKYVIKYEDDIPQLLDVYK 442
>gi|147854552|emb|CAN78574.1| hypothetical protein VITISV_020582 [Vitis vinifera]
Length = 362
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 12/246 (4%)
Query: 150 FFESLGLSQSELSPLLPR--HLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFR 207
+ ++G+ ++ ++ + ++ L +E ++ L G S++ + I
Sbjct: 49 YLRTIGIQDRKIPSIVTKCPKILALGLNEKIVPMVQCLATLGTKPSEVASAIAKFPHILS 108
Query: 208 HD-RGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGF-KNDW 265
H L L ++ LG+ + + K++ P L+ ++S+ ++++ L LGF +
Sbjct: 109 HSVEEKLCPLLAFFQALGVPEKQLGKVILVNPRLISYSIESKLTQIVDFLASLGFTREGM 168
Query: 266 IGRYL---PGKGSYNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLF 321
IG+ L P Y+ D+ + T +FL IG E L + P + + + +
Sbjct: 169 IGKVLQKYPFIMGYSVDKRLRPTSEFLKLIGLTEQDLQKVAMNFPEVFCRDANKILSPNV 228
Query: 322 GRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELM 381
L + G + ++ +L S P IL +L + FL+E+ MK N V+ + +
Sbjct: 229 AYLKRRGFEDGQIAALVSGYPPILIKSIKNSLEPRIRFLVEV---MKRDINEVVNYPDFF 285
Query: 382 GSCSLK 387
C LK
Sbjct: 286 -RCGLK 290
>gi|225438055|ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258309 [Vitis vinifera]
gi|297744182|emb|CBI37152.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 459 ALKQFRGRG-DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLC 517
A++ F G +++ + + GL ++ + + + P+ ++ S++ + +D+L N +
Sbjct: 258 AIQVFAGMSKSTWEQKMEVYRRWGLTNHEIMLLFRGFPLCMSLSENKIMSTVDFLVNKMG 317
Query: 518 YPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
+ L +++ P L Y + RI RC + L +G+ K LSL L ++ KF FV
Sbjct: 318 WKLSAIIRVPITLGYSLEKRIIPRCSVGKVLILKGLVKKDLSLGAFLKLTEKKFFDRFV 376
>gi|345793220|ref|XP_003433727.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial [Canis
lupus familiaris]
Length = 417
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 32/184 (17%)
Query: 120 NLLSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLL 179
NLL ++D KD+ + LM F + LG+ ++L P L ++ S+D L
Sbjct: 177 NLLLRLDFEKDIKQILM-------------FLKDLGIEDNQLGPYLTKNYAIFSED---L 220
Query: 180 DNFHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLV 234
+N Y ++++ +M A + L ++L ++ L LS LV
Sbjct: 221 ENLKTRVAYLQSKNFSKAQIAQMVRNAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLV 280
Query: 235 SCCPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRYL---PGKGSYNWDQVSETLDF 287
P LL G ++ V E +K ELGFK++ I + P + N +++ET D+
Sbjct: 281 VRLPRLLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRVPKMLTANKRKLTETFDY 336
Query: 288 LYKI 291
++ +
Sbjct: 337 VHNV 340
>gi|357154596|ref|XP_003576836.1| PREDICTED: uncharacterized protein LOC100838727 [Brachypodium
distachyon]
Length = 598
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 149/344 (43%), Gaps = 53/344 (15%)
Query: 279 DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLF 338
+ + +DFL IG + ++ ++ + P ++ + K G++ + +
Sbjct: 264 NHLKPLIDFLECIGIPKPRIASVLLSFPPIILSDVENDIKPRIRAWEKAGIEQQYISRML 323
Query: 339 SQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHA-----ELMGSCSLKGPKTVC 393
+ P ILS+ ++N Q + F K IS+ VL A ++G CS K ++
Sbjct: 324 LKYPWILSTSVIENYAQVLLFF-----NRKKISSTVLGIAVKSWPHILG-CSTKRMNSIL 377
Query: 394 ---SKLKVGRESLCQIIKDDPLKLFHLASK--------TEVKIDEQ----VDCQNP---S 435
L + ++ L ++ P L S+ ++ D++ + C++P +
Sbjct: 378 VLFDDLGISKKMLVPVLTSSPQLLLRKPSEFLQVVSFFKDIGFDKKAVAKIVCRSPEIFA 437
Query: 436 KDV-----EKTEFLLRLGYVENSEEVTKALKQFR-----GRGDQLQERFDCLVQAGLDSN 485
DV +K FL+ G E + + ++++ L R + + GL
Sbjct: 438 SDVNNTLMKKINFLIDFGVSER--HLPRIIRKYPELLLLDIDRTLLPRMNYFLGIGLSKK 495
Query: 486 VVRNIVKR-APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKM 543
V +++ R +P++ + V++ K+++L + PL+++V +P Y Y + G+I R
Sbjct: 496 DVCSMISRFSPLLGYSIELVMKPKLEFLLRTMKKPLKAIVEYPRYFSYSLEGKIKPR--- 552
Query: 544 YVW-LRERGVAKPTLSLSTILACSDAKFEKYFVDVH--PEGPAM 584
W L+ R + S++ + A +D F + ++ + P P++
Sbjct: 553 -FWVLKSRNI---DCSMTDMFAKNDELFAEEYLQIETLPVTPSL 592
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 93/222 (41%), Gaps = 15/222 (6%)
Query: 169 LMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHD-RGVLASKLWAYENLGLSK 227
L+ S+D L L GIP+ ++ + + I D + ++ A+E G+ +
Sbjct: 257 LLLCSEDNHLKPLIDFLECIGIPKPRIASVLLSFPPIILSDVENDIKPRIRAWEKAGIEQ 316
Query: 228 NTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQV------ 281
+ +++ P +L V + +VL L F I + G +W +
Sbjct: 317 QYISRMLLKYPWILSTSVIENYAQVL-----LFFNRKKISSTVLGIAVKSWPHILGCSTK 371
Query: 282 --SETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFS 339
+ L +G ++ L+ + ++P L+ + + V+ +G V +
Sbjct: 372 RMNSILVLFDDLGISKKMLVPVLTSSPQLLLRKPSEFLQVV-SFFKDIGFDKKAVAKIVC 430
Query: 340 QNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELM 381
++P+I +S L++ + FLI+ G+ + + ++ + EL+
Sbjct: 431 RSPEIFASDVNNTLMKKINFLIDFGVSERHLPRIIRKYPELL 472
>gi|302763101|ref|XP_002964972.1| hypothetical protein SELMODRAFT_83040 [Selaginella moellendorffii]
gi|300167205|gb|EFJ33810.1| hypothetical protein SELMODRAFT_83040 [Selaginella moellendorffii]
Length = 346
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 140/364 (38%), Gaps = 94/364 (25%)
Query: 218 WAY-ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSY 276
W+Y E++ + K V +V+ CP LL+ ++ R ++ L+ +G K + I + + S
Sbjct: 62 WSYLESIVVPKRKVTSVVARCPPLLMMPLEERLKPMVMFLQTMGLKREDIAKTINRYPSI 121
Query: 277 NWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVF-EGSGQKVYVLFGRLLKLGLKMNEVY 335
V E K P L F EG+ G++ +
Sbjct: 122 FMHSVEE-------------------KLCPLLAFLEGAA-------------GVRPERIG 149
Query: 336 SLFSQNPQILSSKFVKNLLQAVGFLIEIGM-GMKDISNMVLMHAELMGSCSLKGPKTVCS 394
L P++LS + L V FL +G+ ++ +V + + G
Sbjct: 150 KLLVLCPRLLSYSIDQKLRPMVDFLCGLGVEPGHELGKLVCSYPNIFG------------ 197
Query: 395 KLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENS- 453
+ + ++ +V + E+L +LG +N
Sbjct: 198 --------------------YSIENRLQVTV----------------EYLRQLGLSKNDL 221
Query: 454 EEVTKALKQFRGRGDQ-LQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS-KDVLEKKIDY 511
+++ R ++ L+ + L+ AGL + + +V P +L +S K ++ K+++
Sbjct: 222 KKIIVCYPHIICRAEKALEPAVNYLLTAGLSAGQITTLVAGFPPILVKSVKRSIQPKVEF 281
Query: 512 LKNYLCYPLESVVAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
L + LE V FPAY + + R I R K L+++G + L +L C+ KF
Sbjct: 282 LMRDMGRGLEEAVEFPAYFGHSLNRKIGPRHK---KLKDQG----AIPLHAMLNCNKKKF 334
Query: 571 EKYF 574
F
Sbjct: 335 TSKF 338
>gi|357473247|ref|XP_003606908.1| mTERF domain-containing protein [Medicago truncatula]
gi|355507963|gb|AES89105.1| mTERF domain-containing protein [Medicago truncatula]
Length = 617
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 133/356 (37%), Gaps = 64/356 (17%)
Query: 224 GLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGR----YLPGKGSYNWD 279
G+ + + +VS CP LL ++ +V L ++G G + G Y +
Sbjct: 285 GVRREWMGYVVSRCPKLLSYSLEEVKTRVQFYL-DMGLDAKDFGTMVFDFPKALGHYTLE 343
Query: 280 QVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFS 339
+++ +D+L + G + L P L+ ++ L L G+ + + + +
Sbjct: 344 EMNRKVDYLKEFGLESKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMRRMLT 403
Query: 340 QNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVC----SK 395
P + ++ V F ++G+ I+ M++ L+ K + V +K
Sbjct: 404 IKPMVFCVDLEMTIVPKVKFFQDLGVRNDGIAKMLVKFPTLLTYSLYKKIRPVVIFLMTK 463
Query: 396 LKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEE 455
V E++ ++I P E + C K ++ L LG
Sbjct: 464 AGVTEENIPKVIALGP---------------ELLGCSIVHKLEGNVKYYLSLGI------ 502
Query: 456 VTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNY 515
R QL E ++ PM+L + DVL K YL+
Sbjct: 503 ----------RLQQLGE-----------------MIADFPMLLRYNIDVLRPKYTYLRKT 535
Query: 516 LCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
+ L+ + FP + Y + GRI R K+ V E + + L +LAC+D +F
Sbjct: 536 MVRTLKDAIEFPRFFSYSLEGRIIPRHKVLV---ENQI---NVKLKCMLACTDEEF 585
>gi|15220662|ref|NP_176388.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|334183576|ref|NP_001185290.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|3367527|gb|AAC28512.1| Strong similarity to gi|2160138 F19K23.6 gene product from A.
thaliana BAC gb|AC000375 [Arabidopsis thaliana]
gi|22655087|gb|AAM98134.1| unknown protein [Arabidopsis thaliana]
gi|30725672|gb|AAP37858.1| At1g61970 [Arabidopsis thaliana]
gi|332195787|gb|AEE33908.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|332195788|gb|AEE33909.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 418
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 140/355 (39%), Gaps = 66/355 (18%)
Query: 266 IGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLL 325
I R + + N D V L+ L G+ Q+ + + P L+ + + + L
Sbjct: 72 ISRKVSFEDKNNPDSV---LNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQ 128
Query: 326 KLGLKMNEVYSLFSQNPQILSSK----------FVK-----------------------N 352
G +E+ + S P+IL K F+K N
Sbjct: 129 SRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQGNLEN 188
Query: 353 LLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIK---D 409
++ V L E+GM K L+ S + + VC K K E+L ++++ D
Sbjct: 189 KIRNVSVLRELGMPHK-----------LLFSLLISDSQPVCGKEKF-EETLKKVVEMGFD 236
Query: 410 DPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQF----RG 465
F A + K++E+ EK LG+ + +V + K++ R
Sbjct: 237 PTTSKFVEALQVIYKMNEKTI-------EEKVHLYKSLGF--DVGDVWSSFKKWPISLRV 287
Query: 466 RGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVA 525
++ + + + G + +VK P + S + ++KK ++L + +PL++VV+
Sbjct: 288 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 347
Query: 526 FPAYLCYDM-GRINHRCKMYVWLRERGVAKPTL-SLSTILACSDAKFEKYFVDVH 578
PA Y + RI R + L +G+ + L S+S +L C+ F +V H
Sbjct: 348 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANH 402
>gi|255544484|ref|XP_002513303.1| conserved hypothetical protein [Ricinus communis]
gi|223547211|gb|EEF48706.1| conserved hypothetical protein [Ricinus communis]
Length = 574
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 130/320 (40%), Gaps = 24/320 (7%)
Query: 77 ASRVSRLARTEAQEVLF---DYLHSTRSLGYMDAEHISKNSPDFVLNLLSKIDSGKDVTR 133
A V+R TE+ L Y+ G D HI +N+ +++L ID T
Sbjct: 158 AMNVARYLSTESLPALILKVKYIKEMFFSGSDDKGHIGRNARRMMMHLSIPIDDDLQQTL 217
Query: 134 SLMRFLRYNPINEFEPFFESLGLSQSELSPLL---PRHLMFLSDDEV--LLDNFHVLCDY 188
SL + I + LG S + + PR L+ D + +++ F L
Sbjct: 218 SL-----FEKIQARRGGLDRLGSSDATFRYFIESFPRTLLLQPDAHLKPMVEFFESL--- 269
Query: 189 GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSR 248
G+P+ +M +++ + +D V+ K+ A E +G K++ P +L +
Sbjct: 270 GVPKERMDSIFLLFPPVILYDIKVIKRKVLALEKVGAVDEDFGKMIFKYPWILSTSIQDN 329
Query: 249 FVKVL-----EKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGYNEVQLLNLFK 303
+ ++L EK+ + D R P + ++ +D +G ++ ++
Sbjct: 330 YKEILSFCDAEKVAKASI--DKAIRSWPHLLGCSTSKLKVIVDHFGILGVKHKKVGHVIA 387
Query: 304 TNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEI 363
+P L+ + + V+ L +LG V + + P+I ++ K L + V FL +
Sbjct: 388 KSPQLLLRKPEEFLQVV-SFLKELGFDQESVGKILVRCPEIFATSAEKTLRKKVEFLTWM 446
Query: 364 GMGMKDISNMVLMHAELMGS 383
G+ + + + EL+ S
Sbjct: 447 GVYGDHLCRTIKKYPELLVS 466
>gi|357111636|ref|XP_003557618.1| PREDICTED: uncharacterized protein LOC100824727 [Brachypodium
distachyon]
Length = 608
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 11/234 (4%)
Query: 141 YNPINEFEPFFESLGLSQSELSPLLPR--HLMFLSDDEVLLDNFHVLCDYGIPRSKMGKM 198
+ + E + ES G+ + + ++ R LM LS DE L D G+ G M
Sbjct: 243 FEELEEIIGYVESCGVRRDWIGHVISRCPQLMNLSLDE-LETRVRFYTDMGMNEHDFGTM 301
Query: 199 YVEATEIFRH-DRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLK 257
+ ++ + + SK+ + GLS V KL++ P L+ ++ R+ +++ L
Sbjct: 302 VYDYPKVLGYFSLEEMNSKVQYLKEFGLSTEEVGKLLAFKPQLMACSIEERWKPLVKYLY 361
Query: 258 ELGFKNDWIGRYL---PGKGSYNWDQV-SETLDFLYKIGYNEVQLLN-LFKTNPALVFEG 312
L D + R L P + + V + + FL IG L N L K P L +
Sbjct: 362 HLNISRDGMKRMLTVQPTIFCLDLETVIAPKVQFLQDIGVRNDALGNVLVKFPPVLTYSL 421
Query: 313 SGQ-KVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGM 365
+ + V+F R K G+ ++ + + +PQ+L V L +V + +G+
Sbjct: 422 YRKLRPVVIFLR-TKGGVTQEDIGKVIALDPQLLGCSIVHKLEVSVKYFRSLGI 474
>gi|426235814|ref|XP_004011874.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial [Ovis
aries]
Length = 417
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ D L+R I + F + LG+ ++L P L ++ S+D L+N
Sbjct: 166 LSKIEKHPDAANLLLRLDFEKDIKQMLLFLKDLGIEDTQLGPFLTKNYAIFSED---LEN 222
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
Y ++ + +M A + L ++L ++ L LS LV
Sbjct: 223 LKTRVAYLQSKNFSKADIAQMVRNAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLVIR 282
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLY 289
P LL G ++ V E LK ELGF+ + I +P + N +++ET D+++
Sbjct: 283 LPRLLTGSLEP----VKENLKVFQLELGFQQNEIQHMITKIPKMLTANKRKLTETFDYVH 338
Query: 290 KI 291
+
Sbjct: 339 NV 340
>gi|15220660|ref|NP_176387.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|3367526|gb|AAC28511.1| Strong similarity to gi|2160136 F19K23.4 gene product from A.
thaliana BAC gb|AC000375 [Arabidopsis thaliana]
gi|115311419|gb|ABI93890.1| At1g61960 [Arabidopsis thaliana]
gi|332195786|gb|AEE33907.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 457
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
+VKR P ++ + + ++KK +++ + +PLE++V+ P Y + R RC + L
Sbjct: 348 MVKRYPQCIDYTAETVKKKTEFIVKNMNWPLEALVSIPQVFGYSLEKRTVPRCNVIKTLI 407
Query: 549 ERGVAK---PTLSLSTILACSDAKFEKYFVDVH 578
+G+ K +S++L +D F + +V H
Sbjct: 408 SKGLMKDGSEAPPMSSVLTSTDQAFLRRYVMKH 440
>gi|225438045|ref|XP_002271737.1| PREDICTED: uncharacterized protein LOC100256578 [Vitis vinifera]
Length = 463
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 106/261 (40%), Gaps = 20/261 (7%)
Query: 327 LGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSL 386
+GL ++ S+ S P IL+ K L+ FL + ++N M S S
Sbjct: 185 MGLSSADLASILSSEPSILNKSLEKVLIPKHNFLKSV-----HVNNEGAMKILKRSSWSS 239
Query: 387 KGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLR 446
G KT+ + + V RE I H++ + + CQ K E + ++
Sbjct: 240 SG-KTIAANIAVLREIGVPIS--------HISF---LVVRYHTICQKSDKFSENVKKVVE 287
Query: 447 LGYVENSEEVTKALKQFRGRGDQL-QERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVL 505
+G+ AL+ F + Q++ + + G + + + + P + S+ +
Sbjct: 288 MGFNPLKFTFVNALQAFCQMTESTRQQKMEMYRRWGWSEDEIVSAFRSRPQCMQLSEKKV 347
Query: 506 EKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILA 564
K +D+L N + + V P +C + R+ RC + L +G+ K L L L+
Sbjct: 348 TKVLDFLVNKMGWQPAVVARAPVAICLNFEKRVVPRCSVVKVLLLKGLVKKDLRLDHFLS 407
Query: 565 CSDAKF-EKYFVDVHPEGPAM 584
++ F +KY + + P +
Sbjct: 408 LTEGNFLDKYVIKYEDDIPQL 428
>gi|26450011|dbj|BAC42126.1| unknown protein [Arabidopsis thaliana]
Length = 457
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
+VKR P ++ + + ++KK +++ + +PLE++V+ P Y + R RC + L
Sbjct: 348 MVKRYPQCIDYTAETVKKKTEFIVKNMNWPLEALVSIPQVFGYSLEKRTVPRCNVIKTLI 407
Query: 549 ERGVAK---PTLSLSTILACSDAKFEKYFVDVH 578
+G+ K +S++L +D F + +V H
Sbjct: 408 SKGLMKDGSEAPPMSSVLTSTDQAFLRRYVMKH 440
>gi|297840337|ref|XP_002888050.1| hypothetical protein ARALYDRAFT_893294 [Arabidopsis lyrata subsp.
lyrata]
gi|297333891|gb|EFH64309.1| hypothetical protein ARALYDRAFT_893294 [Arabidopsis lyrata subsp.
lyrata]
Length = 220
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 491 VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRE 549
VK PM S + +EKK ++L + +PL+SVV+ PA L Y + RI RC + L
Sbjct: 144 VKGFPMCFGLSAETVEKKTEFLVKKIIWPLKSVVSNPAGLGYSLQKRIVPRCNVIKALMS 203
Query: 550 RGV 552
+G+
Sbjct: 204 KGL 206
>gi|219363607|ref|NP_001136974.1| uncharacterized protein LOC100217134 [Zea mays]
gi|194697822|gb|ACF82995.1| unknown [Zea mays]
Length = 400
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 481 GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINH 539
G + V N V + P +L S+ L +KI++L N + ++ P L + + R+
Sbjct: 279 GCSESEVSNAVSKTPQILALSEATLLRKIEFLVNEGAIEPQYIMQRPILLAFSLEKRLVP 338
Query: 540 RCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVH 578
R ++ L+ +G+ +SLS++ + ++ F+ FVD H
Sbjct: 339 RYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCH 377
>gi|357129182|ref|XP_003566245.1| PREDICTED: uncharacterized protein LOC100839904 [Brachypodium
distachyon]
Length = 383
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 51/98 (52%)
Query: 481 GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHR 540
G + ++V +++R P+ L SK+ + + +++L LE +V++P+ L + + + +
Sbjct: 248 GFEKDIVTAMLRRYPLSLAISKEKIIENVEFLVIKAGLSLEDIVSYPSLLTHSIETHSKK 307
Query: 541 CKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVH 578
C + LR G + ++ +L + +F + +V H
Sbjct: 308 CAVLTLLRREGEPEGHHRVAVVLKATAKRFLEVYVRRH 345
>gi|255546666|ref|XP_002514392.1| conserved hypothetical protein [Ricinus communis]
gi|223546489|gb|EEF47988.1| conserved hypothetical protein [Ricinus communis]
Length = 331
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 214 ASKLWAY-ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL-- 270
AS+ W+Y +++G+ + + ++S CP +L G++ + + ++E L L + + +
Sbjct: 43 ASENWSYLKSVGIQERKLPCVISKCPKILTLGLNEKLIPMVECLSTLATRPHDVASAITK 102
Query: 271 -PGKGSYNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLG 328
P S++ ++ + L FL +G +E QL + NP L+ K+ + L LG
Sbjct: 103 FPHILSHSLEEKLCPLLAFLQALGISEKQLGKIILLNPRLISYSIESKLTEIVQFLAGLG 162
Query: 329 LKMNE-VYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELM 381
L + + + ++P I+ K L FL +G+ ++ +V+ E++
Sbjct: 163 LSGDGMIGKVLVKHPFIMGYSVDKRLRPTSEFLKSVGLTELNLQTVVMNFPEVL 216
>gi|221327769|gb|ACM17586.1| mitochondrial transcription termination factor-like family-4 [Oryza
granulata]
Length = 440
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 491 VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRE 549
V + P +L S + L +KI+++ + LE +V P L Y + RI R + L+
Sbjct: 325 VCKKPNILGFSDENLRRKINFMTTEVGLELEYIVERPLLLTYSLEKRIVPRHSVTKILQT 384
Query: 550 RGVAKPTLSLSTILACSDAKFEKYFVDVHPE-GPAMWESLKKS 591
G+ K + +L CSD F ++D + PA+ E KS
Sbjct: 385 VGLMKEFVGFCNLLTCSDEDFHARYIDPYKHAAPALAECYAKS 427
>gi|348678518|gb|EGZ18335.1| hypothetical protein PHYSODRAFT_351340 [Phytophthora sojae]
Length = 347
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 7/210 (3%)
Query: 166 PRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGL 225
PR + + DE L L D GI R+K + + + +L SK+ E LGL
Sbjct: 46 PRQVKGVFSDEALNRTVAFLADRGISRTKAMQAVANFVPLVTYSTELLESKISWLEELGL 105
Query: 226 SKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGF---KNDWIGRYLPGKGSYNWDQVS 282
S + + + PS+L G R++ ++ G K ++ P S + + +
Sbjct: 106 SHDKINVAILRNPSML-GHTTERYMTLVNWFLAHGVPEAKLPFLFIIGPSLLSLSSNTLD 164
Query: 283 ETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNP 342
LDF +IG + QL + K P V S + + +++LG+ + L P
Sbjct: 165 SKLDFFREIGLTDEQLTGILKRAPQ-VLCYSTESMNSKLDYMVQLGIPRERLPQLLPNAP 223
Query: 343 QILSSKF--VKNLLQAVGFLIEIGMGMKDI 370
IL + ++ A+ + G G + I
Sbjct: 224 DILGLRMSRIQETFDALDEMFGDGAGSQAI 253
>gi|15220664|ref|NP_176389.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|3367528|gb|AAC28513.1| Strong similarity to gi|2160138 F19K23.6 gene product from A.
thaliana BAC gb|AC000375 [Arabidopsis thaliana]
gi|119935863|gb|ABM06016.1| At1g61980 [Arabidopsis thaliana]
gi|332195789|gb|AEE33910.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 418
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
++KR P + S ++++KK ++L + +PL+++V+ PA L Y + R R + L
Sbjct: 312 LIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALI 371
Query: 549 ERGVAKPTL-SLSTILACSDAKFEKYFVDVH 578
+G+ L S+S + C+D F +V H
Sbjct: 372 SKGLIGSELPSISRVFVCTDQVFLNRYVKRH 402
>gi|302817143|ref|XP_002990248.1| hypothetical protein SELMODRAFT_131326 [Selaginella moellendorffii]
gi|300141957|gb|EFJ08663.1| hypothetical protein SELMODRAFT_131326 [Selaginella moellendorffii]
Length = 324
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 124/320 (38%), Gaps = 55/320 (17%)
Query: 277 NWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVY 335
N D+ V +++L IG + NP ++ + L LG + +
Sbjct: 49 NLDKSVINKVEYLKGIGVQRAHAKRIVLKNPRVLAYSLESNIIPKVEFLDGLGFRRKSLG 108
Query: 336 SLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCS- 394
+L + PQ+LS L + FL+ +G+ +++++ ++ E MG L KT +
Sbjct: 109 ALLCKCPQLLSDMVSTCLRRKANFLLFLGVKSSQLADIMYVYPEFMG-LKLDEVKTRLAF 167
Query: 395 --KLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVEN 452
L+V + L ++ P + + T+VK P + K+ LG+
Sbjct: 168 YKSLRVEQHDLATMLTKHP-AIMNYDINTQVK---------PVIEYFKSS----LGFT-- 211
Query: 453 SEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDV-LEKKIDY 511
T+ L F ++R P VL +S + + +Y
Sbjct: 212 ----TRGLAAF---------------------------LRRRPSVLGESVEFRVMATTEY 240
Query: 512 LKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
L + ++ ++ FP + YD+ R+ R ++ WL+ + + K L F
Sbjct: 241 LLKDMQLDMDELLKFPQFFGYDLEDRVKPRHRLVAWLKAKHIIKQDYP-PCYLHMRRQVF 299
Query: 571 EKYFVDVHPEGPAMWESLKK 590
E F+D HPE ++ K+
Sbjct: 300 EDMFLDCHPEARDIFRGYKE 319
>gi|297840343|ref|XP_002888053.1| hypothetical protein ARALYDRAFT_475137 [Arabidopsis lyrata subsp.
lyrata]
gi|297333894|gb|EFH64312.1| hypothetical protein ARALYDRAFT_475137 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 439 EKTEFLLRLGY-VENSEEVTKALKQFRGRGDQ-LQERFDCLVQAGLDSNVVRNIVKRAPM 496
EK RLG+ V N V K F ++ + + + G + +VKR P
Sbjct: 260 EKVNAYERLGFDVGNVWAVFKRWPNFLTHSEKKILSTIETFLGLGFTRDEFSMLVKRFPQ 319
Query: 497 VLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKP 555
+ S + ++KK ++L + +P++++V+ PA L Y M R R + L +G+
Sbjct: 320 GIGLSPETVKKKTEFLVKKMNWPIKALVSNPAILGYSMEKRTVPRGNVIKALISKGLIGS 379
Query: 556 TL-SLSTILACSDAKFEKYFVDVHPE 580
L S+S + C++ F +V H +
Sbjct: 380 ELPSISHVFICTNQVFLNRYVKKHED 405
>gi|171906591|ref|NP_079823.2| mTERF domain-containing protein 1, mitochondrial precursor [Mus
musculus]
gi|81901619|sp|Q8R3J4.1|MTER1_MOUSE RecName: Full=mTERF domain-containing protein 1, mitochondrial;
AltName: Full=Mitochondrial transcription termination
factor 3; Short=mTERF3; Flags: Precursor
gi|19263525|gb|AAH25173.1| MTERF domain containing 1 [Mus musculus]
gi|55154445|gb|AAH85282.1| MTERF domain containing 1 [Mus musculus]
gi|148678384|gb|EDL10331.1| MTERF domain containing 1, isoform CRA_b [Mus musculus]
Length = 412
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ D L+R I + F + LGL ++L P L ++ S+D L+N
Sbjct: 161 LSKIEKHPDAANLLLRLDFEKHIKQILLFLKDLGLEDNQLGPFLTKNYAIFSED---LEN 217
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
Y ++ + +M A + L ++L ++ L L+ LV
Sbjct: 218 LKTRVAYLQSKNFSKTDIARMVKNAPFLLSFSVERLDNRLGFFQKELELNVKKTRDLVVR 277
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLY 289
P LL G ++ V E +K ELGFK++ I +P + N +++E D+++
Sbjct: 278 LPRLLTGSLEP----VKENMKVYHLELGFKHNEIQHMVIKIPKMLTANKRKLTEIFDYVH 333
Query: 290 KI 291
+
Sbjct: 334 NV 335
>gi|326504882|dbj|BAK06732.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 31/285 (10%)
Query: 324 LLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGS 383
L LG EV ++ +++PQ+L S + L V L +G+ +I+ + L+
Sbjct: 82 LAGLGFSGAEVAAVVARDPQLLCSSVERTLSPVVAGLAGLGLSPSEITRLALLTGVPFRC 141
Query: 384 CSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQV----DCQNPSKDVE 439
S+ C ESL +K + L S E + V +C + D+
Sbjct: 142 RSVVSGLQYCLSFFGSSESLLGALKSGSI----LGSDLERVVKPNVAFLRECGLRACDIA 197
Query: 440 KTEFL-------------LRLGYVENSEEVTKALKQFRGRGDQL----QERFDCLVQA-- 480
K L G+ E V + + FR + +E+ V+
Sbjct: 198 KLYVLSPSPLNIRTERIRTAAGWAEGLLGVPRGSRMFRHALQAVAFLSEEKITTKVEHLK 257
Query: 481 ---GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GR 536
G V RAP +L++S+D L+ K +L + + + P L Y + GR
Sbjct: 258 KLFGWSDAEVGAAFSRAPSLLSRSEDSLQSKYKFLISEVGLEPAYIAHRPVMLTYSLEGR 317
Query: 537 INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEG 581
+ R + +L+E G+ + L ++ F F+ H E
Sbjct: 318 LRPRYYVLRYLKENGILDHGRNYYCTLCMTEKVFMDKFICPHKEA 362
>gi|440901846|gb|ELR52721.1| mTERF domain-containing protein 1, mitochondrial [Bos grunniens
mutus]
Length = 417
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ D L+R I + F + LG+ ++L P L ++ S+D L+N
Sbjct: 166 LSKIEKHPDAANLLLRLDFEKDIKQMLLFLKDLGIEDTQLGPFLTKNYAIFSED---LEN 222
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
Y ++ + +M A + L ++L ++ L LS LV
Sbjct: 223 LKTRVAYLQSKNFSKADIAQMVRNAPFLLSFSVERLDNRLGFFQKELKLSVKKTRDLVIR 282
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLY 289
P LL G ++ V E +K ELGF+ + I +P + N +++ET D+++
Sbjct: 283 LPRLLTGSLEP----VKENMKVFRLELGFQQNEIQHMITKIPKMLTANKRKLTETFDYVH 338
Query: 290 KI 291
+
Sbjct: 339 NV 340
>gi|110735984|dbj|BAE99966.1| hypothetical protein [Arabidopsis thaliana]
Length = 248
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 463 FRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLES 522
FR G +++ R DCL + GL +V + P V+ + +EKKI++L N + + +
Sbjct: 82 FRA-GFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINC 140
Query: 523 VVAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPE 580
+ P YL ++ + I R + +L+ +G + L ++ S +F +V +PE
Sbjct: 141 LADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPE 199
>gi|297840341|ref|XP_002888052.1| hypothetical protein ARALYDRAFT_475136 [Arabidopsis lyrata subsp.
lyrata]
gi|297333893|gb|EFH64311.1| hypothetical protein ARALYDRAFT_475136 [Arabidopsis lyrata subsp.
lyrata]
Length = 414
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
+VKR P + S + +++K ++L + +PL ++V P Y M RI RC + L
Sbjct: 305 MVKRYPPCIEYSLESVKRKNEFLVKKMNWPLNALVLHPQVFGYSMEKRIIPRCNVLKVLL 364
Query: 549 ERGVAKPTLSL---STILACSDAKFEKYFVDVHPE 580
+G+ + L S++L+C+D F +V H E
Sbjct: 365 SKGLLRKKSELPAVSSVLSCTDEGFLNRYVMKHNE 399
>gi|225438051|ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
Length = 410
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 439 EKTEFLLRLGYVENSEEVTKALKQFRGRG-DQLQERFDCLVQAGLDSNVVRNIVKRAPMV 497
E + ++ +G+ + KA++ F G +++ + + G ++ + + + P
Sbjct: 236 ETVKKVMEMGFDPLTVVFIKAIQVFGGMSKSTWEQKMEVYRRWGWSNDEIVLLFRAFPAC 295
Query: 498 LNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPT 556
++ S+ + +D+L N + + L + FP L +++ RI RC + L +G+ K
Sbjct: 296 MSLSEKKIMSTMDFLVNKMGWKLTEITRFPISLGFNLEKRIIPRCWVGKVLMLKGLVKKD 355
Query: 557 LSLSTILACSDAKFEKYFV 575
LSL L +++KF FV
Sbjct: 356 LSLGAFLRYTESKFLDRFV 374
>gi|195605386|gb|ACG24523.1| mTERF family protein [Zea mays]
gi|414873674|tpg|DAA52231.1| TPA: putative mitochondrial transcription termination factor family
protein [Zea mays]
Length = 400
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 481 GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINH 539
G + V N V + P +L S+ L +KI++L N + ++ P L + + R+
Sbjct: 279 GCSESEVSNAVSKMPQILALSEATLLRKIEFLVNEGAIEPQYIMQRPILLAFSLEKRLVP 338
Query: 540 RCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVH 578
R ++ L+ +G+ +SLS++ + ++ F+ FVD H
Sbjct: 339 RYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCH 377
>gi|297840347|ref|XP_002888055.1| hypothetical protein ARALYDRAFT_315190 [Arabidopsis lyrata subsp.
lyrata]
gi|297333896|gb|EFH64314.1| hypothetical protein ARALYDRAFT_315190 [Arabidopsis lyrata subsp.
lyrata]
Length = 445
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
++KR P ++ + + ++KK D++ + +PLE +V P Y + R RC + L
Sbjct: 338 MIKRYPQCIDYTAETVKKKTDFIVKKMNWPLEGLVLIPQIFGYSLEKRTVPRCNVIKTLM 397
Query: 549 ERGVAKPTL-SLSTILACSDAKFEKYFV 575
+G+ + +S+IL +D F + +V
Sbjct: 398 SKGLLGSEIPPMSSILTSTDQAFLRRYV 425
>gi|326504716|dbj|BAK06649.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 491 VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRE 549
+ RAPM+L +SKD+L + D+L + + + P L Y + GR+ R + +L+E
Sbjct: 273 LSRAPMLLRKSKDMLRHRSDFLISEVGLEPWYIAHRPVILYYSLEGRLRPRYYVLKFLKE 332
Query: 550 RGVAKPTLSLSTILACSDAKFEKYFVD 576
G+ +S T++ +D KYFVD
Sbjct: 333 AGLVDCNMSFYTVVTRTD----KYFVD 355
>gi|395512166|ref|XP_003760315.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial
[Sarcophilus harrisii]
Length = 413
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 478 VQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRI 537
+Q G N ++++V R P +L SK L + DY+ N + P +V FP + +I
Sbjct: 299 LQLGFKHNEIQHMVTRIPKILTASKKKLTETFDYVHNVMNIPHHIIVKFPQVFNSKVLKI 358
Query: 538 NHRCKMYVWL--RERGVAKPT-LSLSTILACSDAKF 570
R +L + KP +SL +++ D F
Sbjct: 359 KERHSFLTYLGRAQYDPQKPNYISLDKLVSLPDEVF 394
>gi|255642584|gb|ACU21555.1| unknown [Glycine max]
Length = 401
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Query: 435 SKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQE-RFDCLVQAGLDSNVVRNIVKR 493
S+ VE +G+ A++ R ++E RF+ + G + + + ++
Sbjct: 235 SRFVEAVNTAKEIGFNPLRISFINAIEMHLSRSKAVRESRFEVYEKWGWNGEMALQVFRK 294
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGV 552
P V+ ++ KK+ +L + + E + +P L Y++ RI R + L+ +G+
Sbjct: 295 FPYVMKLPEETFTKKMSFLVKDMGWLSEDIAEYPQVLAYNLEKRIIPRFSVIKILKSKGL 354
Query: 553 AKPTLSLSTILACSDAKF-EKYFVDVH---PEGPAMWESLKKSSN 593
+ + S I+ ++ F EK+ ++ P P + SL N
Sbjct: 355 LEKNVHFSKIICVTEKLFLEKFVINYQKDLPFLPDFYNSLTNQQN 399
>gi|356567456|ref|XP_003551935.1| PREDICTED: uncharacterized protein LOC100777030 [Glycine max]
Length = 401
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Query: 435 SKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQE-RFDCLVQAGLDSNVVRNIVKR 493
S+ VE +G+ A++ R ++E RF+ + G + + + ++
Sbjct: 235 SRFVEAVNTAKEIGFNPLRISFINAIEMHLSRSKAVRESRFEVYEKWGWNGEMALQVFRK 294
Query: 494 APMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGV 552
P V+ ++ KK+ +L + + E + +P L Y++ RI R + L+ +G+
Sbjct: 295 FPYVMKLPEETFTKKMSFLVKDMGWLSEDIAEYPQVLAYNLEKRIIPRFSVIKILKSKGL 354
Query: 553 AKPTLSLSTILACSDAKF-EKYFVDVH---PEGPAMWESLKKSSN 593
+ + S I+ ++ F EK+ ++ P P + SL N
Sbjct: 355 LEKNVHFSKIICVTEKLFLEKFVINYQKDLPFLPDFYNSLTNQQN 399
>gi|115470491|ref|NP_001058844.1| Os07g0134700 [Oryza sativa Japonica Group]
gi|34394417|dbj|BAC83514.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113610380|dbj|BAF20758.1| Os07g0134700 [Oryza sativa Japonica Group]
gi|125557150|gb|EAZ02686.1| hypothetical protein OsI_24800 [Oryza sativa Indica Group]
gi|125599036|gb|EAZ38612.1| hypothetical protein OsJ_23001 [Oryza sativa Japonica Group]
Length = 608
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 13/235 (5%)
Query: 141 YNPINEFEPFFESLGLSQSELSPLLPR--HLMFLSDDEVLLDNFHVLCDYGIPRSKMGKM 198
+ + E + ES G+ + + ++ R L+ LS DE L D G+ + G M
Sbjct: 248 FEELEEIIYYMESCGVRKDWIGHVVGRCPQLLNLSMDE-LETRVRFYTDMGMNDNDFGTM 306
Query: 199 ---YVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEK 255
Y +A F + + SK+ + GLS + + KL++ P L+ ++ R+ +++
Sbjct: 307 VYDYPKALGFFSLEE--MNSKVQYLKEFGLSTDELGKLMAFKPQLMACSIEERWKPLVKY 364
Query: 256 LKELGFKNDWIGRYL---PGKGSYNWDQV-SETLDFLYKIGYNEVQLLN-LFKTNPALVF 310
L L D + R L P + + V + + FL IG + L K P L +
Sbjct: 365 LYHLNISRDGMKRMLVVQPTIFCLDLETVIAPKVQFLQDIGVRSDAVGGVLVKFPPVLTY 424
Query: 311 EGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGM 365
+ V+ + K +K ++ + + +PQ+L V+ L +V +L +G+
Sbjct: 425 SLYKKIRPVVIFLMTKAAVKQEDIGKVIALDPQLLGCSIVRKLEVSVKYLRSLGI 479
>gi|297840345|ref|XP_002888054.1| hypothetical protein ARALYDRAFT_893298 [Arabidopsis lyrata subsp.
lyrata]
gi|297333895|gb|EFH64313.1| hypothetical protein ARALYDRAFT_893298 [Arabidopsis lyrata subsp.
lyrata]
Length = 768
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 475 DCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM 534
+ + G + N+VK P + S + ++KK ++L + +PL+++V PA L Y+M
Sbjct: 284 ETFLGLGFSRDEFANMVKSFPQGIGLSAETVKKKTEFLVKKMNWPLKALVLNPAVLGYNM 343
Query: 535 -GRINHRCKMYVWLRERGVAKPTLS 558
RI RC + L +G+ T S
Sbjct: 344 EKRIVPRCNVIKALMSKGLLGDTGS 368
>gi|326520213|dbj|BAK04031.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 383
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 60/251 (23%)
Query: 337 LFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCS-- 394
+ S+N +L+S + + + L+E G+ DI M + ++ L+ S PKTV S
Sbjct: 164 ILSRNYYLLTSDLERVVKPNIALLLESGVSADDIVKMCVPNSRLLTS----SPKTVRSIL 219
Query: 395 ----KLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYV 450
KL V R SL +F A T +
Sbjct: 220 ERADKLGVPRGSL----------MFKEAVTTTTGL------------------------- 244
Query: 451 ENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKID 510
+E + LK F +E G V N+V+R PMVL S + L + +
Sbjct: 245 -GAESLAAKLKLF-------EEIL------GWSEAEVTNLVRRNPMVLRISGEKLRRAKE 290
Query: 511 YLKNYLCYPLESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVAKPTLSLSTILACSDAK 569
+L + ++A P+ L Y + R+ R + L+E+G+ + S T++ +
Sbjct: 291 FLTKVVGVDTSYILARPSILMYSLKCRLVPRHYVMKLLQEKGLIQKDQSFYTMVTPGEET 350
Query: 570 FEKYFVDVHPE 580
F++ +D H +
Sbjct: 351 FQRRHIDAHKD 361
>gi|222623796|gb|EEE57928.1| hypothetical protein OsJ_08629 [Oryza sativa Japonica Group]
Length = 589
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 133/352 (37%), Gaps = 77/352 (21%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
L +L K+G +L + PA + + + L L + ++ + + P
Sbjct: 139 VLSYLEKLGVTRARLAAFVRAYPACLHASVAVDLTPVVKSLRGLDVDRQDLPRVLERYPD 198
Query: 344 ILSSKFVKNLLQAVGFLIEI-GMGMKDISNMVLMHAELMGS-------------CSLKGP 389
IL K + +V +L+ I G+ +DI MV +G SL P
Sbjct: 199 ILGLKPDGTISTSVAYLVGIVGVAPRDIGPMVTHFPFFLGMRVGTTIKPLCEYITSLGLP 258
Query: 390 KTVCSKL--------------------------KVGRESLCQIIKDDPLKLFHLASKTEV 423
+ +++ + +E L +I P + L KT++
Sbjct: 259 MRILARILEKRPYILGYDLEETVKPNVEALLSFGIRKEMLPLVIAQYP-PILGLPLKTKL 317
Query: 424 KIDE-------QVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDC 476
+ Q+D + +EK L+ L + + K ++ RGRG
Sbjct: 318 AAQQYFFNLKLQIDPDAFACAIEKLPQLVSL----HQNIILKLVEFLRGRG--------- 364
Query: 477 LVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-G 535
+ + V +V R P +L ++++ + + K+ + P+ ++ +P Y Y +
Sbjct: 365 -----ISNEDVARMVVRCPQILLLRMELMKNSLYFFKSEMKRPISELLDYPEYFTYSLES 419
Query: 536 RINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKY----FVDVHPEGPA 583
RI R Y+ + +G+ SL L CSD +FE+ F++ GP+
Sbjct: 420 RIKPR---YMRVSTKGI---RCSLDWFLNCSDQRFEERMRGDFIEGDAPGPS 465
>gi|327269563|ref|XP_003219563.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial-like
[Anolis carolinensis]
Length = 415
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 478 VQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRI 537
++ G N VR+IV R P L+ +K L + DYL N + P + +V FP + RI
Sbjct: 301 LELGFTLNEVRHIVHRIPKNLSINKKKLTETFDYLHNIMGIPHKLIVNFPQVFNSKLLRI 360
Query: 538 NHRCKMYVWLRERGVAKPT----LSLSTILACSDAKF 570
R M++ R P +SL ++A D F
Sbjct: 361 KER-HMFLTFLGRAQYDPKEPSYISLEQLVALPDDVF 396
>gi|115449087|ref|NP_001048323.1| Os02g0783100 [Oryza sativa Japonica Group]
gi|47497486|dbj|BAD19540.1| mitochondrial transcription termination factor-like [Oryza sativa
Japonica Group]
gi|113537854|dbj|BAF10237.1| Os02g0783100 [Oryza sativa Japonica Group]
gi|215686737|dbj|BAG89587.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 485
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 133/352 (37%), Gaps = 77/352 (21%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
L +L K+G +L + PA + + + L L + ++ + + P
Sbjct: 124 VLSYLEKLGVTRARLAAFVRAYPACLHASVAVDLTPVVKSLRGLDVDRQDLPRVLERYPD 183
Query: 344 ILSSKFVKNLLQAVGFLIEI-GMGMKDISNMVLMHAELMGS-------------CSLKGP 389
IL K + +V +L+ I G+ +DI MV +G SL P
Sbjct: 184 ILGLKPDGTISTSVAYLVGIVGVAPRDIGPMVTHFPFFLGMRVGTTIKPLCEYITSLGLP 243
Query: 390 KTVCSKL--------------------------KVGRESLCQIIKDDPLKLFHLASKTEV 423
+ +++ + +E L +I P + L KT++
Sbjct: 244 MRILARILEKRPYILGYDLEETVKPNVEALLSFGIRKEMLPLVIAQYP-PILGLPLKTKL 302
Query: 424 KIDE-------QVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDC 476
+ Q+D + +EK L+ L + + K ++ RGRG
Sbjct: 303 AAQQYFFNLKLQIDPDAFACAIEKLPQLVSL----HQNIILKLVEFLRGRG--------- 349
Query: 477 LVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-G 535
+ + V +V R P +L ++++ + + K+ + P+ ++ +P Y Y +
Sbjct: 350 -----ISNEDVARMVVRCPQILLLRMELMKNSLYFFKSEMKRPISELLDYPEYFTYSLES 404
Query: 536 RINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKY----FVDVHPEGPA 583
RI R Y+ + +G+ SL L CSD +FE+ F++ GP+
Sbjct: 405 RIKPR---YMRVSTKGI---RCSLDWFLNCSDQRFEERMRGDFIEGDAPGPS 450
>gi|221327714|gb|ACM17535.1| mitochondrial transcription termination factor-like family-2 [Oryza
australiensis]
Length = 409
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 491 VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRE 549
V + P +L S + L +KI++L + + +V P LCY + R+ R + L+
Sbjct: 275 VGKMPTILGLSMENLRRKIEFLVTKVGLKTQCIVESPVILCYSLEKRVVPRHSVMEILQA 334
Query: 550 RGVAKPTLSLSTILACSDAKFEKYFVDVH 578
RG+ K S +++ +A F ++D H
Sbjct: 335 RGLMKKDASFHSLITRREADFVARYIDTH 363
>gi|395821173|ref|XP_003783922.1| PREDICTED: ephrin type-A receptor 2 [Otolemur garnettii]
Length = 976
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 290 KIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKF 349
K GY E Q ++ F + +++ + S + L G + K M + + + +N + KF
Sbjct: 649 KAGYTEKQRVD-FLSEASIMGQFSHHNIIRLEGVVSKYKPMM--IITEYMENGAL--DKF 703
Query: 350 VK------NLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESL 403
++ N+LQ VG L IG GMK ++NM +H +L L VC KV L
Sbjct: 704 LREKDGEFNVLQLVGMLRGIGAGMKYLANMNYVHRDLAARNILVNSNLVC---KVSDFGL 760
Query: 404 CQIIKDDP 411
++++DDP
Sbjct: 761 SRVLEDDP 768
>gi|242059617|ref|XP_002458954.1| hypothetical protein SORBIDRAFT_03g043300 [Sorghum bicolor]
gi|241930929|gb|EES04074.1| hypothetical protein SORBIDRAFT_03g043300 [Sorghum bicolor]
Length = 388
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 126/295 (42%), Gaps = 32/295 (10%)
Query: 327 LGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSL 386
LGL E+ L +++P+ILS L + G + ISN + + + ++
Sbjct: 93 LGLSKAEIALLVAKDPRILSCSVDNTLRVRMDRFRSYGFSVAQISNFIRVAPCFFRTFNI 152
Query: 387 KGPKTVCSKLKVGRESLCQIIKDDPLKLFHLAS-------KTEVKIDEQ----------V 429
L + +I++ + F++A+ KT +++ ++ +
Sbjct: 153 DEKLGFWMPLLGSPDRFLRIVRRN----FYMATSDLDKVVKTNIRLLQEHGLSIQEIGNL 208
Query: 430 DCQNP---SKDVEKTEFLL----RLGYVENSEEVTKALKQFRGRG-DQLQERFDCLVQA- 480
NP + + ++T +L +G N+ +AL G G + + + + +
Sbjct: 209 CVANPRLLTGNPDRTRAILVRADEMGVPRNTLLFRQALTAVAGLGPETMASKLKMMAKIL 268
Query: 481 GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINH 539
G V +V++ P+VL +S + +++ ++L N + + + P L Y + GR+
Sbjct: 269 GCSDAEVARMVQKNPLVLRRSMERIQRTCEFLTNVVGVDTKYIQGRPTILMYSLEGRLVP 328
Query: 540 RCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEG-PAMWESLKKSSN 593
R + LR++G+ + S T++ SD F +V H + P++ ++ + N
Sbjct: 329 RHYVMKVLRDKGLIRKDQSFYTMVTVSDNVFCSRYVHPHKDVLPSLADAYASACN 383
>gi|425781027|gb|EKV19009.1| Phosphopantothenate-cysteine ligase, putative [Penicillium
digitatum PHI26]
gi|425783290|gb|EKV21147.1| Phosphopantothenate-cysteine ligase, putative [Penicillium
digitatum Pd1]
Length = 399
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 95 YLHSTRS-LGYMDAEHISKNSPDFVLNLLSKIDSGKDVTRSLMRFLRYNPINE---FEPF 150
Y HST L +MD S S + + D +D RS++R RY N PF
Sbjct: 108 YSHSTNCFLDFMDEAPASAESSNSGHGAIMVRDEYQDQMRSVLRKYRYAKQNNRLLLLPF 167
Query: 151 -------FESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDYGIPRSKMGKMYVEAT 203
FE +++ + PL P L FL+ + D+ IPRS+M + +++
Sbjct: 168 TTVSEYMFELRSIAKL-MRPLGPNALFFLAA---------AVSDFFIPRSRMSEHKIQSG 217
Query: 204 EIFRHDRG--VLASKLWAYEN 222
E+ +H RG +L+ +L+ EN
Sbjct: 218 ELPQHMRGSAILSDELYTGEN 238
>gi|224075902|ref|XP_002304820.1| predicted protein [Populus trichocarpa]
gi|222842252|gb|EEE79799.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 471 QERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYL 530
+++ D G V KR P +L S++ + +D+ N + +++VA PA L
Sbjct: 255 RKKIDMFKSVGWTEEEVLWAFKRFPYILLTSEEKIRSMMDFFLNKMKLERQTIVANPALL 314
Query: 531 CYDMG-RINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF 570
Y G RI RC + L+ + + K +++T+L S+ F
Sbjct: 315 KYSFGNRILPRCNVLEVLKSKKLIKGDPNIATLLKLSEKDF 355
>gi|357148449|ref|XP_003574768.1| PREDICTED: uncharacterized protein LOC100827502 isoform 1
[Brachypodium distachyon]
gi|357148451|ref|XP_003574769.1| PREDICTED: uncharacterized protein LOC100827502 isoform 2
[Brachypodium distachyon]
Length = 334
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 137/352 (38%), Gaps = 44/352 (12%)
Query: 242 IGGVDSRFVKVLEK-LKELGFKNDWIGRY------LP----GKGSYNWDQVSETLDFLYK 290
+ GV S K L + L+E GF + IGR LP G+ S WD + LY
Sbjct: 1 MAGVGSGDAKSLTQWLREKGFDEETIGRMSRRCRNLPKLDAGEASAVWDYL------LYD 54
Query: 291 IGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFV 350
+ +L +L P ++ G K+ L L K EV + P IL
Sbjct: 55 VNIERRKLRHLVTKCPKVLTVSVGDKLVPTVQCLNTLQAKPGEVAQAIVKFPPILFHSVE 114
Query: 351 KNLLQAVGFLIEIGMGMKDISNMVLMHAELMG-SCSLKGPKTVCSKLKVGRESLCQIIKD 409
+ L + F + + K ++ +++++ L+ S K +T+ + +G + I K
Sbjct: 115 EKLCPLLAFFETLAISEKQLAKLLMVNPRLISYSIEAKFSQTIDFFVGLGIDKEGMIGK- 173
Query: 410 DPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQF-----R 464
+ +K + VD K + T L+ + + + F R
Sbjct: 174 -------ILAKEPYIMGYSVD-----KRLRPTAEFLKSAVGLQGSNLQRVIMNFPGILSR 221
Query: 465 GRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS-KDVLEKKIDYLKNYLCYPLESV 523
LQ + L +G + + +V P VL +S K LE ++ +L + V
Sbjct: 222 DVDKTLQPNLEFLQSSGFSKDQIMELVAGYPPVLIKSIKHCLEPRVKFLVEEMGRDKGEV 281
Query: 524 VAFPAYLCYDMGR-INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYF 574
V +P + + + R + +R K+ + R SLS +L C+ KF F
Sbjct: 282 VDYPQFFRHGLKRSLEYRHKILKKMNSR------CSLSEMLDCNQKKFAMKF 327
>gi|226528172|ref|NP_001152615.1| PDE191 [Zea mays]
gi|195625512|gb|ACG34586.1| PDE191 [Zea mays]
gi|195658221|gb|ACG48578.1| PDE191 [Zea mays]
gi|224029751|gb|ACN33951.1| unknown [Zea mays]
gi|413921552|gb|AFW61484.1| putative mitochondrial transcription termination factor family
protein isoform 1 [Zea mays]
gi|413921553|gb|AFW61485.1| putative mitochondrial transcription termination factor family
protein isoform 2 [Zea mays]
Length = 334
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 8/176 (4%)
Query: 214 ASKLWAY--ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLP 271
A +W Y + + + + +V+ CP LL VD + ++ L L + + + +
Sbjct: 45 APGVWDYLLTGVKMERRKLRHVVAKCPKLLTLSVDGKLAPTVQCLATLQARPGEVAQAIA 104
Query: 272 GKGSYNWDQVSETL----DFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKL 327
+ V E L F +G +E QL L NP L+ K G L L
Sbjct: 105 KFPQILFHSVEEKLCPLLAFFQTLGVSERQLAKLLMVNPRLISYSIEAKFSQTVGFLAGL 164
Query: 328 GL-KMNEVYSLFSQNPQILSSKFVKNLLQAVGFL-IEIGMGMKDISNMVLMHAELM 381
G+ + + + ++ P I+ K L FL E+G+ D+ +V+ +++
Sbjct: 165 GVDREGMIGKILTKEPYIMGYSVDKRLRPTAEFLKSEVGLQGPDLQRVVMTFPDIL 220
>gi|326494178|dbj|BAJ90358.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 382
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 108/279 (38%), Gaps = 31/279 (11%)
Query: 324 LLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGS 383
L LGL ++ +L +++PQ L +K + L L +G+ +I+ +V +
Sbjct: 79 LAGLGLSGADIAALIAKDPQFLCAKVERTLAPVAVGLASLGLSRPEIARLVSLSGRRFRC 138
Query: 384 CSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQV----DCQNPSKDVE 439
S + E+L +++K L +S E + V +C +D+
Sbjct: 139 ASTVSNVHYYLRFFGSSENLLRVLKRGSCLL---SSDLERVVKPNVSFLRECGLADRDIA 195
Query: 440 KTEFLLRLGYVENSEEV------TKALKQFRGRG--------------DQLQERFDCL-- 477
K V + E + + + RG G +++ R D L
Sbjct: 196 KLSISQPWMLVASPERLRAMAACAEGIGVPRGSGMFRQALQAVAFLSAEKIAARVDFLKS 255
Query: 478 VQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GR 536
V DS V V RAP VL SKD L + ++L + + + LCY + GR
Sbjct: 256 VFKWSDSEV-GIAVSRAPRVLITSKDFLRSRSEFLVSEVGLEPTYIAQRSVILCYSLEGR 314
Query: 537 INHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
+ R + L+E G+ K S + SD F K ++
Sbjct: 315 LRPRHYVMKLLKENGLLKHDRSYFAAVVVSDTDFIKKYI 353
>gi|449435158|ref|XP_004135362.1| PREDICTED: uncharacterized protein LOC101202822 [Cucumis sativus]
Length = 374
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 115/294 (39%), Gaps = 26/294 (8%)
Query: 319 VLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHA 378
+ G L G + ++ L S+ P IL SK NL FL EIG + ++L
Sbjct: 67 AIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHKLLLSTP 126
Query: 379 ELMGS---CSLKGPKTVCSKLKVGRESLCQIIKDDP-LKLFHLASKTEVKIDEQVDCQNP 434
++GS LK V ++ E + I P L +++L + D P
Sbjct: 127 WVLGSSLDSQLKPSFFVIKEMLESDEQVIAAISRFPSLLIYNLKGNFKSISDILASEGVP 186
Query: 435 SKDVEKTEFLLRLGYVENSEEVTKALKQFRGRG--------------------DQLQERF 474
S+++ K L ++ ++ + A+K + G +++
Sbjct: 187 SRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNESTWKKKI 246
Query: 475 DCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM 534
+ L G N + + K+ P L S++ L D+ N E+++ +P + +
Sbjct: 247 NVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYPMFFNTSL 306
Query: 535 G-RINHRCKMYVWLRERGVAKPTLSLSTILACSDAKF-EKYFVDVHPEGPAMWE 586
R+ R K+ L+ + + K T IL + +F EKY V E P + +
Sbjct: 307 DKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLMD 360
>gi|147817762|emb|CAN68940.1| hypothetical protein VITISV_028995 [Vitis vinifera]
Length = 379
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 432 QNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQLQE-RFDCLVQAGLDSNVVRNI 490
QN K + + +G+ KA++ G G+ + E R + + GL + + ++
Sbjct: 199 QNREKFSTSVKKVXEMGFDPLKVSFLKAVQVICGMGESIWEQRMEVYKRWGLTDDEIMSM 258
Query: 491 VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRE 549
+ P+ + S+ + +D+L N + + ++ +P + +I RC + L+
Sbjct: 259 FRLDPLCMRSSEKKIMSVMDFLVNKMGWEPATIARYPTVFMRSLEKKIIPRCSVVKVLQM 318
Query: 550 RGVAKPTLSLSTILACSDAK-FEKYFVDVHPEGPAM 584
+G+ K L L IL CS+ F+K+ + E P +
Sbjct: 319 KGLVKKDLCLG-ILGCSENNFFDKFVLKYEQEVPEL 353
>gi|242045580|ref|XP_002460661.1| hypothetical protein SORBIDRAFT_02g032730 [Sorghum bicolor]
gi|241924038|gb|EER97182.1| hypothetical protein SORBIDRAFT_02g032730 [Sorghum bicolor]
Length = 609
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 41/172 (23%)
Query: 215 SKLWAYENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYL---P 271
S L + +LG+SK V+ +++ P LL+ D +F++ + +E+G G+ L P
Sbjct: 387 SALELFHDLGISKKMVVPVITSSPQLLLRKPD-QFMQNVLLFREMGVDKKTTGKILCRAP 445
Query: 272 GKGSYNWDQ-VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLK 330
+ N D + + +DFL G ++ L + + P L+ L
Sbjct: 446 EIFASNVDSTLKKKIDFLINFGVSKHHLPRIIRKYPELLL------------------LD 487
Query: 331 MNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMG 382
+N + LL + +L+E+G+ KDI +M+ + L+G
Sbjct: 488 IN------------------RTLLPRMNYLLEVGLSKKDICSMIFRFSPLLG 521
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 128/332 (38%), Gaps = 65/332 (19%)
Query: 221 ENLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNW-- 278
E++G+ K + ++ P +++ V++ + + ++ G + D+IGR L Y W
Sbjct: 286 EHIGIPKTKIASVLLLFPPIILSDVENDIKPRIREWEKAGMEQDYIGRML---LKYPWIL 342
Query: 279 -----DQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNE 333
+ S+ L F + + L K+ P + S +++ LG+
Sbjct: 343 STSVIENYSQMLLFFNRKKISSTVLGIAVKSWPH-ILGCSSKRMNSALELFHDLGISKKM 401
Query: 334 VYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGS---CSLKGPK 390
V + + +PQ+L K +Q V E+G+ K ++ E+ S +LK
Sbjct: 402 VVPVITSSPQLLLRK-PDQFMQNVLLFREMGVDKKTTGKILCRAPEIFASNVDSTLKKKI 460
Query: 391 TVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYV 450
V + L +II+ P L D+ +T
Sbjct: 461 DFLINFGVSKHHLPRIIRKYPELLL--------------------LDINRT--------- 491
Query: 451 ENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDS-NVVRNIVKRAPMVLNQSKDVLEKKI 509
L R + L++ GL ++ I + +P++ + V++ K+
Sbjct: 492 -------------------LLPRMNYLLEVGLSKKDICSMIFRFSPLLGYSIELVMKPKL 532
Query: 510 DYLKNYLCYPLESVVAFPAYLCYDM-GRINHR 540
++L + PL++VV +P Y Y + G+I R
Sbjct: 533 EFLLRTMKKPLKAVVEYPRYFSYSLEGKIKPR 564
>gi|242066586|ref|XP_002454582.1| hypothetical protein SORBIDRAFT_04g033830 [Sorghum bicolor]
gi|241934413|gb|EES07558.1| hypothetical protein SORBIDRAFT_04g033830 [Sorghum bicolor]
Length = 388
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 110/284 (38%), Gaps = 43/284 (15%)
Query: 324 LLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLM------- 376
L +GL +++ + ++ P++L SK K L LI IG+ IS ++ +
Sbjct: 75 LAGVGLAKDDIAAGIARYPRLLCSKVDKTLTPRFAQLISIGLSPPQISRLMAIVPNIFGA 134
Query: 377 ---------HAELMGSCSLKGPKTVCSKLKVGRE------------SLCQIIKDDPLKLF 415
+ MGS L +++ +GR C + + L+
Sbjct: 135 PKMISHLQFYLSFMGSFDLLHSAIKINRILLGRSLENVVKPNIAFLQQCGLTASNSLEFP 194
Query: 416 HLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRG-DQLQERF 474
L S + E+V C +LG N+ AL G + + +
Sbjct: 195 ILISMKPENVRERVACAE------------KLGVPRNTGMFKSALWAVCCVGPNSIGAKM 242
Query: 475 DCL-VQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYD 533
D + G + ++V++ P +L S+ L + +LK + ++ ++ PA L Y
Sbjct: 243 DVMKATLGCSEAELASVVRKFPQILRISEGKLSSTMKFLKVDVGLKVQYILGRPAILGYS 302
Query: 534 MG-RINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVD 576
M R+ R L+ +G+ K + + ++ +F + F+D
Sbjct: 303 MQRRLMPRHYFIKILKAKGLVKENIDFYNTVCLTEKRFVQKFID 346
>gi|28204792|gb|AAO37138.1| hypothetical protein [Arabidopsis thaliana]
Length = 429
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 120/291 (41%), Gaps = 33/291 (11%)
Query: 251 KVLEKLKELGFKNDWIGRYLPGKG----SYNWDQVSETLDFLYKIGYNEVQLLNLFKTNP 306
+++E L+ G + DW+G Y+ G+ S++ ++V +DF K+G N+ + P
Sbjct: 146 EIVEYLESNGVRRDWMG-YVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYP 204
Query: 307 ALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGM- 365
++ S Q + L + GL EV L + P ++ + V + +G+
Sbjct: 205 KIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIP 264
Query: 366 --GMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLC--QIIKDDPLKLFHLASKT 421
GMK I L+ ++ L+ KT+ K++ +E + I + +K L + +
Sbjct: 265 KEGMKRI----LVVKPILYCIDLE--KTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNS 318
Query: 422 EVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGR-----GDQLQERFDC 476
K V FLL V +++ K + G +L+
Sbjct: 319 LYKKIRPV-----------VIFLLTRAGV-TQKDIGKVIAMDPALLGCSIGTKLEPNMRY 366
Query: 477 LVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFP 527
+ G+ + ++ PM+L + D L K YL+ + PL+ ++ FP
Sbjct: 367 YISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFP 417
>gi|449495369|ref|XP_004159817.1| PREDICTED: uncharacterized protein LOC101230490 [Cucumis sativus]
Length = 364
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 118/305 (38%), Gaps = 22/305 (7%)
Query: 292 GYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVK 351
G++E Q+ +L K P+L + + GL E+ P++L+ K
Sbjct: 69 GFSESQISDLAKRYPSLFSANPDKTILPKLLFFQSKGLSSPEIVKFVCSVPRVLAGSLNK 128
Query: 352 NLLQAVGFLIEIGMGMKDISNMVLMHAELMG---SCSLKGPKTVCSKLKVGRESLCQIIK 408
++ A ++ + + + A+++G S+ + + V ++ ++
Sbjct: 129 RIIPAFDYIQAVLGSEEKTLAAIKRSADILGWDLQISVGPNIEILKQTGVPDSNISSYLQ 188
Query: 409 DDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRG-RG 467
P K+F L S K E E + +G+ + A+ R
Sbjct: 189 QQP-KMF-LTSSIRFK--------------EAVERVTEMGFNPQQMQFVVAVFCLRAMTK 232
Query: 468 DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFP 527
L ++ + + GL +R K+ P + S+D + +DY N + V P
Sbjct: 233 STLDKKVEVYRKWGLSEEEIRLAFKKNPWCMMISEDKINGAMDYFVNKIGCQSSYVARRP 292
Query: 528 AYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEG-PAMW 585
Y + R+ R +Y L +G+ K LS++ S+ +F K F++ H E P +
Sbjct: 293 GLTLYSLKKRLLPRGYIYQVLLSKGLIKKHEYLSSLFNSSENRFIKKFINPHKEQIPGLL 352
Query: 586 ESLKK 590
E K+
Sbjct: 353 ELYKE 357
>gi|297724609|ref|NP_001174668.1| Os06g0224600 [Oryza sativa Japonica Group]
gi|51536066|dbj|BAD38192.1| mitochondrial transcription termination factor-like [Oryza sativa
Japonica Group]
gi|255676842|dbj|BAH93396.1| Os06g0224600 [Oryza sativa Japonica Group]
Length = 389
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 222 NLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLP-GKGSYNWDQ 280
LG+ + + V+ P LL GV+ K + +L +LG I R +P K +
Sbjct: 85 GLGIPRPDIATAVAADPRLLCAGVEGNLAKRVAELGDLGIPRSQIARLVPLAKIPFRSSS 144
Query: 281 VSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQ 340
++ L F + + +L + N +L+ + V L + G+ +V S
Sbjct: 145 LATNLAFWLPVFGSLDSILRALRKNSSLLSANLDKVVKPNLAFLKQCGIDARDVAS---- 200
Query: 341 NPQILSSK-FVKN---LLQAVGFLIEIGM 365
NP + SS+ F N L AV + E+GM
Sbjct: 201 NPNLYSSRLFTSNPMKLRDAVARVEELGM 229
>gi|47229396|emb|CAF99384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 302
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 476 CLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMG 535
C ++ G N +++IV P VL +K L + DYL N + P + FP L
Sbjct: 186 CEIEFGFKKNEIQHIVTAVPKVLTANKKKLTQIFDYLHNTMKVPHHLIAKFPQVLNSKYL 245
Query: 536 RINHRCKMYVWLRERGVAK-----PT-LSLSTILACSDAKF 570
RI R +++L G A+ PT +SL +++ D F
Sbjct: 246 RIRER---HLFLEYLGKAQYDPALPTYISLDRLVSLPDESF 283
>gi|224053244|ref|XP_002297734.1| predicted protein [Populus trichocarpa]
gi|222844992|gb|EEE82539.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 20/257 (7%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
L FL G+++ + L + P ++ G + F +K G + L + +P
Sbjct: 31 VLLFLKSHGFDDSHIAQLIEKRPKILHSGVDDTLKPKFDFFVKNGFTGKLLPQLIASDPN 90
Query: 344 ILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESL 403
ILS+ V + L+ L+++ +G D + L A + S S KG +L + +E +
Sbjct: 91 ILSAA-VDSHLKPCFELLKLFLGSPDRIVVALKRAPFLMSFSFKGAVQPNIELLI-KEGM 148
Query: 404 CQIIKDDPLKLFHLASKT-EVKIDEQVDCQNPSKDV---EKTEFLLRLGYVENSEEVTKA 459
D KL L ++ VK D V N K++ KT L V S ++K+
Sbjct: 149 HV---DRVAKLLSLHARVILVKHDRMVYAVNALKNLGVEPKTPVFLHAAKVMLS--ISKS 203
Query: 460 LKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYP 519
+++ + + G + KR P +L S++ + K +D+ N L
Sbjct: 204 ---------NWRKKIEVMKSLGWSEEEIIVAFKRYPYLLACSEEKIRKSLDFFVNTLKLE 254
Query: 520 LESVVAFPAYLCYDMGR 536
++++ P YL Y + R
Sbjct: 255 PQAIITCPEYLSYSVDR 271
>gi|15220666|ref|NP_176390.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|18087610|gb|AAL58935.1|AF462848_1 At1g61990/F8K4_18 [Arabidopsis thaliana]
gi|3367529|gb|AAC28514.1| Strong similarity to gi|2160138 F19K23.6 gene product from A.
thaliana BAC gb|AC000375 [Arabidopsis thaliana]
gi|23507789|gb|AAN38698.1| At1g61990/F8K4_18 [Arabidopsis thaliana]
gi|332195790|gb|AEE33911.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 414
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 490 IVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLR 548
+VKR P + S + ++KK ++L + +P ++V P Y M RI RC + L
Sbjct: 305 MVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALL 364
Query: 549 ERGVAKPTLSL---STILACSDAKFEKYFVDVHPE 580
+G+ + L S++L+C+D F +V H E
Sbjct: 365 SKGLLRKGSELPAVSSVLSCTDEGFLDRYVMKHNE 399
>gi|226495163|ref|NP_001152154.1| LOC100285792 [Zea mays]
gi|195653247|gb|ACG46091.1| mTERF family protein [Zea mays]
Length = 290
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 473 RFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCY 532
R + V G VR R P + S+D ++K++ ++ L + + + ++P L +
Sbjct: 168 RVENYVSLGWTEEQVRRAFVRHPYFMTVSEDKVKKRMQFIAEKLGWNPDVLSSYPTILSF 227
Query: 533 DM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPE 580
R+ R ++ L RGV K + +S L + KF++ +VD H E
Sbjct: 228 SHEKRVLPRYRVLHILASRGVIKKGIRMSH-LTMPEKKFKERYVDKHQE 275
>gi|115496045|ref|NP_001069349.1| mTERF domain-containing protein 1, mitochondrial [Bos taurus]
gi|94534891|gb|AAI16051.1| MTERF domain containing 1 [Bos taurus]
gi|296480416|tpg|DAA22531.1| TPA: MTERF domain containing 1 [Bos taurus]
Length = 417
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ D L+R I + + LG+ ++L P L ++ S+D L+N
Sbjct: 166 LSKIEKHPDAANLLLRLDFEKDIKQMLLLLKDLGIEDTQLGPFLTKNYAIFSED---LEN 222
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
Y ++ + +M A + L ++L ++ L LS LV
Sbjct: 223 LKTRVAYLQSKNFSKADIAQMVRNAPFLLSFSAERLDNRLGFFQKELKLSVKKTRDLVIR 282
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLY 289
P LL G ++ V E +K ELGF+ + I +P + N +++ET D+++
Sbjct: 283 LPRLLTGSLEP----VKENMKVFQLELGFQQNEIQHMITKIPKMLTANKRKLTETFDYVH 338
Query: 290 KI 291
+
Sbjct: 339 NV 340
>gi|119612156|gb|EAW91750.1| MTERF domain containing 1, isoform CRA_a [Homo sapiens]
Length = 327
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 76 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKT 135
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L ++L ++ L LS LV P
Sbjct: 136 RVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPR 195
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 196 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 250
>gi|242079975|ref|XP_002444756.1| hypothetical protein SORBIDRAFT_07g027350 [Sorghum bicolor]
gi|241941106|gb|EES14251.1| hypothetical protein SORBIDRAFT_07g027350 [Sorghum bicolor]
Length = 334
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 9/207 (4%)
Query: 183 HVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAY--ENLGLSKNTVIKLVSCCPSL 240
H L + G + +M + D G AS +W Y + + + + +V+ CP +
Sbjct: 15 HWLRENGFDDDAVARMSRRCRNLHSLDAGE-ASGVWDYLLTGVKMERRKLRHVVAKCPKV 73
Query: 241 LIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETL----DFLYKIGYNEV 296
L VD + V ++ L L + + + + + V E L F +G +E
Sbjct: 74 LTLSVDGKLVPTVQCLATLQARPGEVAQAIAKFPQILFHSVEEKLCPLLAFFQTLGVSEK 133
Query: 297 QLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGL-KMNEVYSLFSQNPQILSSKFVKNLLQ 355
QL L NP L+ K L+ LG+ K + + ++ P I+ K L
Sbjct: 134 QLAKLLMVNPRLISYSIEAKFSQTVDFLVGLGIDKEGMIGKILTKEPYIMGYSVDKRLRP 193
Query: 356 AVGFL-IEIGMGMKDISNMVLMHAELM 381
FL +G+ +D+ +++ +++
Sbjct: 194 TAEFLKSAVGLQGQDLKRVIMSFPDIL 220
>gi|218185421|gb|EEC67848.1| hypothetical protein OsI_35463 [Oryza sativa Indica Group]
Length = 245
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 491 VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRE 549
V + P +L S D L +KI++L + LE +V L Y + R+ R + LR
Sbjct: 111 VGKRPTILGLSMDNLRRKIEFLVTEVGLKLECIVECLGILRYSLEKRMVPRHSVMEILRA 170
Query: 550 RGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSNSS 595
RG+ K SL ++ +A F ++D H + M L + N+S
Sbjct: 171 RGLMKKGASLYGLIMQGEADFVARYIDTHKD---MVHGLADAYNAS 213
>gi|119612158|gb|EAW91752.1| MTERF domain containing 1, isoform CRA_c [Homo sapiens]
Length = 296
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 45 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKT 104
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L ++L ++ L LS LV P
Sbjct: 105 RVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPR 164
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 165 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 219
>gi|449487899|ref|XP_004157856.1| PREDICTED: uncharacterized protein LOC101228690 [Cucumis sativus]
Length = 469
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 125 IDSGKDVTRSLMRFLRYNPINEFEP---FFESLGLSQSELSPLLPR--HLMFLSDDEVLL 179
+D K++TR F Y+ + +P FF LG+ +S++ +L + L +S E L
Sbjct: 197 LDQIKEITRRFPSFAYYSLEGKIKPVIEFFLDLGVPKSDIPIILYKRPQLCGISLSENLK 256
Query: 180 DNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPS 239
L + G+ + K K+ I + + + + + LGLS+ V K+++ CP+
Sbjct: 257 PTMKFLENLGVDKKKWAKVIYRFPAILTYSKQKVETTISFLYELGLSEERVGKVLTRCPN 316
Query: 240 LLIGGVDSRFVKVLEKLKELG 260
+ V+ + E LG
Sbjct: 317 ITSYSVEEKLRPTAEYFHTLG 337
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 8/163 (4%)
Query: 222 NLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGF-KNDW---IGRYLPGKGSYN 277
+LG+ K+ + ++ P L + ++ L+ LG K W I R+ P +Y+
Sbjct: 228 DLGVPKSDIPIILYKRPQLCGISLSENLKPTMKFLENLGVDKKKWAKVIYRF-PAILTYS 286
Query: 278 WDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSL 337
+V T+ FLY++G +E ++ + P + +K+ LG+ +V L
Sbjct: 287 KQKVETTISFLYELGLSEERVGKVLTRCPNITSYSVEEKLRPTAEYFHTLGV---DVAVL 343
Query: 338 FSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAEL 380
+ PQ NL F +E G M+D+ M +A L
Sbjct: 344 LYRCPQTFGLSIEANLKPVTQFFLERGYSMEDVGTMTSRYAAL 386
>gi|380790107|gb|AFE66929.1| mTERF domain-containing protein 1, mitochondrial precursor [Macaca
mulatta]
Length = 417
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 48/241 (19%)
Query: 65 LAESTQPPASLVASRVSRLARTEAQEVLFDYLHSTRSLGYM-----DAEHISKNSPDFVL 119
+A+ PPAS L DY+ + +L + D I K++
Sbjct: 134 IADPPLPPASFT---------------LRDYVDHSETLQKLVLLGVDLSKIEKHTE--AA 176
Query: 120 NLLSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVL 178
NLL ++D KD+ + L+ F + +G+ ++L L + H +F D E L
Sbjct: 177 NLLLRLDFEKDIKQMLL-------------FLKDVGIEDNQLGAFLTKNHAIFSEDLENL 223
Query: 179 LDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCC 237
L ++ + +M +A + L ++L ++ L LS LV
Sbjct: 224 KIRVAYLLSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRL 283
Query: 238 PSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYK 290
P LL G ++ V E +K ELGFK++ I +P + N +++ET DF++
Sbjct: 284 PRLLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKRKLTETFDFVHN 339
Query: 291 I 291
+
Sbjct: 340 V 340
>gi|109086991|ref|XP_001091306.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial isoform
2 [Macaca mulatta]
gi|355698112|gb|EHH28660.1| mTERF domain-containing protein 1, mitochondrial [Macaca mulatta]
Length = 417
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 48/241 (19%)
Query: 65 LAESTQPPASLVASRVSRLARTEAQEVLFDYLHSTRSLGYM-----DAEHISKNSPDFVL 119
+A+ PPAS L DY+ + +L + D I K++
Sbjct: 134 IADPPLPPASFT---------------LRDYVDHSETLQKLVLLGVDLSKIEKHTE--AA 176
Query: 120 NLLSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVL 178
NLL ++D KD+ + L+ F + +G+ ++L L + H +F D E L
Sbjct: 177 NLLLRLDFEKDIKQMLL-------------FLKDVGIEDNQLGAFLTKNHAIFSEDLENL 223
Query: 179 LDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCC 237
L ++ + +M +A + L ++L ++ L LS LV
Sbjct: 224 KIRVAYLLSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRL 283
Query: 238 PSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYK 290
P LL G ++ V E +K ELGFK++ I +P + N +++ET DF++
Sbjct: 284 PRLLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKRKLTETFDFVHN 339
Query: 291 I 291
+
Sbjct: 340 V 340
>gi|193786002|dbj|BAG50978.1| unnamed protein product [Homo sapiens]
Length = 296
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 45 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKT 104
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L ++L ++ L LS LV P
Sbjct: 105 RVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPR 164
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 165 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 219
>gi|306992135|pdb|3OPG|A Chain A, Crystal Structure Of Human Mitochondrial Transcription
Termination Factor 3
Length = 298
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 47 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKT 106
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L ++L ++ L LS LV P
Sbjct: 107 RVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPR 166
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 167 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 221
>gi|355779842|gb|EHH64318.1| mTERF domain-containing protein 1, mitochondrial [Macaca
fascicularis]
Length = 417
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 48/241 (19%)
Query: 65 LAESTQPPASLVASRVSRLARTEAQEVLFDYLHSTRSLGYM-----DAEHISKNSPDFVL 119
+A+ PPAS L DY+ + +L + D I K++
Sbjct: 134 IADPPLPPASFT---------------LRDYVDHSETLQKLVLLGVDLSKIEKHTE--AA 176
Query: 120 NLLSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVL 178
NLL ++D KD+ + L+ F + +G+ ++L L + H +F D E L
Sbjct: 177 NLLLRLDFEKDIKQMLL-------------FLKDVGIEDNQLGAFLTKNHAIFSEDLENL 223
Query: 179 LDNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCC 237
L ++ + +M +A + L ++L ++ L LS LV
Sbjct: 224 KIRVAYLLSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRL 283
Query: 238 PSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYK 290
P LL G ++ V E +K ELGFK++ I +P + N +++ET DF++
Sbjct: 284 PRLLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKRKLTETFDFVHN 339
Query: 291 I 291
+
Sbjct: 340 V 340
>gi|295789527|pdb|3M66|A Chain A, Crystal Structure Of Human Mitochondrial Transcription
Termination Factor 3
Length = 270
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 19 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKT 78
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L ++L ++ L LS LV P
Sbjct: 79 RVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPR 138
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 139 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 193
>gi|222615692|gb|EEE51824.1| hypothetical protein OsJ_33302 [Oryza sativa Japonica Group]
Length = 245
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 491 VKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRE 549
V + P +L S D L +KI++L + LE +V L Y + R+ R + LR
Sbjct: 111 VGKRPTILGLSMDNLRRKIEFLVTEVGLKLECIVECLGILRYSLEKRMVPRHSVMEILRA 170
Query: 550 RGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSNSS 595
RG+ K SL ++ +A F ++D H + M L + N+S
Sbjct: 171 RGLMKKGASLYGLIMQGEADFVARYIDTHKD---MVHGLADAYNAS 213
>gi|343925294|ref|ZP_08764821.1| putative AraC family transcriptional regulator [Gordonia
alkanivorans NBRC 16433]
gi|343764891|dbj|GAA11747.1| putative AraC family transcriptional regulator [Gordonia
alkanivorans NBRC 16433]
Length = 351
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 58 THQPKVSLAESTQPPASLVASRVSRLARTEAQEVLFD--YLHSTRSLGYMDAEHISKNSP 115
T+QP+VS+++ T PP +V S ++ E EV+ D + H R L DA H S
Sbjct: 20 TNQPRVSVSQVTPPPRRVVGSGIADW--DEVHEVVADAYFPHELRPLSRDDASHYRLEST 77
Query: 116 DFVLNLLSKIDSGKDVT 132
+L++I G DV+
Sbjct: 78 AIGPTVLARIGFGADVS 94
>gi|148907411|gb|ABR16839.1| unknown [Picea sitchensis]
Length = 174
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 447 LGYVENSEEVTKALKQFRGRG-DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVL 505
LGY + S+ A++ G G ++L R CL G N + +I ++ P L +++ +
Sbjct: 10 LGYKKGSKMFALAVRPILGLGQEKLDRRRQCLRSLGFSENQILDIWRKKPSSLGITEEKI 69
Query: 506 EKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVA---------KP 555
++ +D++ PL +V +P Y + R+ R ++ L+ V K
Sbjct: 70 KRNVDFVVKTAGIPLADLVKYPNLFEYSVETRMIPRYRVMEALKSIQVQAQAPTKKGKKE 129
Query: 556 TLSLSTILACSDAKFEKYFVDVHPEGPAM 584
LS I + +F + +V+ + E A+
Sbjct: 130 GLSFVQIFIMPENRFLEQYVNSNAESSAL 158
>gi|402878769|ref|XP_003903044.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial [Papio
anubis]
Length = 417
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 166 LSKIEKHAEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKI 225
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L ++L ++ L LS LV P
Sbjct: 226 RVAYLLSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPR 285
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 286 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKRKLTETFDFVHNV 340
>gi|224095165|ref|XP_002310355.1| predicted protein [Populus trichocarpa]
gi|222853258|gb|EEE90805.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 60/258 (23%)
Query: 323 RLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMG 382
+L +LG++ ++ + S++PQ+L K + LQ V FL ++G + + + E+
Sbjct: 4 QLAELGIRNKKLGQVISKSPQLLLRK-PQEFLQVVLFLEDLGFDRETVGQVASRCPEIFA 62
Query: 383 SC---SLKGPKTVCSKLKVGRESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVE 439
+ +LK ++ V ++ L ++IK P L DV
Sbjct: 63 ASIEKTLKKKIEFLDRIGVSKDHLPRVIKKYPELLVS--------------------DVN 102
Query: 440 KTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLN 499
+T L R+ Y+++ GL + +V+R +L
Sbjct: 103 RT-ILPRMKYLKD---------------------------VGLSKKDIAFMVRRFSPLLG 134
Query: 500 QSKD-VLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGRINHRCKMYVW-LRERGVAKPTL 557
S D VL K ++L N + P+E +V +P Y Y + + W L+ R +
Sbjct: 135 YSIDEVLRPKYEFLVNTMKKPVEDIVGYPRYFSYSL---EKKIMPRFWVLKGRNI---EC 188
Query: 558 SLSTILACSDAKFEKYFV 575
SL +LA +D +F F+
Sbjct: 189 SLKDMLAKNDEEFAADFM 206
>gi|449448552|ref|XP_004142030.1| PREDICTED: uncharacterized protein LOC101203240 [Cucumis sativus]
Length = 566
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 125 IDSGKDVTRSLMRFLRYNPINEFEP---FFESLGLSQSELSPLLPR--HLMFLSDDEVLL 179
+D K++TR F Y+ + +P FF LG+ +S++ +L + L +S E L
Sbjct: 294 LDQIKEITRRFPSFAYYSLEGKIKPVIEFFLDLGVPKSDIPIILYKRPQLCGISLSENLK 353
Query: 180 DNFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYENLGLSKNTVIKLVSCCPS 239
L + G+ + K K+ I + + + + + LGLS+ V K+++ CP+
Sbjct: 354 PTMKFLENLGVDKKKWAKVIYRFPAILTYSKQKVETTISFLYELGLSEERVGKVLTRCPN 413
Query: 240 LLIGGVDSRFVKVLEKLKELG 260
+ V+ + E LG
Sbjct: 414 ITSYSVEEKLRPTAEYFHTLG 434
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 8/163 (4%)
Query: 222 NLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGF-KNDW---IGRYLPGKGSYN 277
+LG+ K+ + ++ P L + ++ L+ LG K W I R+ P +Y+
Sbjct: 325 DLGVPKSDIPIILYKRPQLCGISLSENLKPTMKFLENLGVDKKKWAKVIYRF-PAILTYS 383
Query: 278 WDQVSETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSL 337
+V T+ FLY++G +E ++ + P + +K+ LG+ +V L
Sbjct: 384 KQKVETTISFLYELGLSEERVGKVLTRCPNITSYSVEEKLRPTAEYFHTLGV---DVAVL 440
Query: 338 FSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAEL 380
+ PQ NL F +E G M+D+ M +A L
Sbjct: 441 LYRCPQTFGLSIEANLKPVTQFFLERGYSMEDVGTMTSRYAAL 483
>gi|62901914|gb|AAY18908.1| unknown [synthetic construct]
Length = 351
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 100 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKT 159
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L ++L ++ L LS LV P
Sbjct: 160 RVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPR 219
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 220 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 274
>gi|355705381|gb|AES02299.1| MTERF domain containing 1 [Mustela putorius furo]
Length = 251
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ D L+R I + F + LG+ ++L L ++ S+D L+N
Sbjct: 42 LSKIEKHPDAANLLLRLDFEKDIKQILMFLKDLGIEDNQLGTYLTKNYAIFSED---LEN 98
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
Y ++ + +M A + L ++L ++ L LS LV
Sbjct: 99 LKTRVAYLQSKNFSKAHIAQMVRNAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLVVR 158
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRYL---PGKGSYNWDQVSETLDFLY 289
P LL G ++ V E +K ELGFK + I + P + N +++ET D+++
Sbjct: 159 LPRLLTGSLEP----VKENMKVYRLELGFKRNEIQHMITKVPKMLTANKRKLTETFDYVH 214
Query: 290 KI 291
+
Sbjct: 215 NV 216
>gi|301771183|ref|XP_002921010.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial-like
[Ailuropoda melanoleuca]
gi|281353502|gb|EFB29086.1| hypothetical protein PANDA_009841 [Ailuropoda melanoleuca]
Length = 414
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ D L+R I + F + LG+ ++L L ++ S+D L+N
Sbjct: 163 LSKIEKHPDAANLLLRLDFEKDIKQILMFLKDLGIEDNQLGTYLTKNYAIFSED---LEN 219
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
Y ++ + +M A + L ++L ++ L LS LV
Sbjct: 220 LKTRVAYLQSKNFSKAHIAQMVRNAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLVVR 279
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRYL---PGKGSYNWDQVSETLDFLY 289
P LL G ++ V E +K ELGFK++ I + P + N +++ET D+++
Sbjct: 280 LPRLLTGSLEP----VKENMKVYHLELGFKHNEIQHMITKVPKMLTANKRKLTETFDYVH 335
Query: 290 KI 291
+
Sbjct: 336 NV 337
>gi|34147676|ref|NP_057026.3| mTERF domain-containing protein 1, mitochondrial precursor [Homo
sapiens]
gi|55630990|ref|XP_519867.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial isoform
3 [Pan troglodytes]
gi|397502148|ref|XP_003821729.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial [Pan
paniscus]
gi|74731522|sp|Q96E29.2|MTER1_HUMAN RecName: Full=mTERF domain-containing protein 1, mitochondrial;
AltName: Full=Mitochondrial transcription termination
factor 3; Short=mTERF3; Flags: Precursor
gi|33869930|gb|AAH12995.2| MTERF domain containing 1 [Homo sapiens]
gi|119612157|gb|EAW91751.1| MTERF domain containing 1, isoform CRA_b [Homo sapiens]
gi|312152516|gb|ADQ32770.1| MTERF domain containing 1 [synthetic construct]
gi|410207974|gb|JAA01206.1| MTERF domain containing 1 [Pan troglodytes]
gi|410253576|gb|JAA14755.1| MTERF domain containing 1 [Pan troglodytes]
gi|410291142|gb|JAA24171.1| MTERF domain containing 1 [Pan troglodytes]
gi|410334495|gb|JAA36194.1| MTERF domain containing 1 [Pan troglodytes]
Length = 417
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 166 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKT 225
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L ++L ++ L LS LV P
Sbjct: 226 RVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPR 285
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 286 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 340
>gi|426360288|ref|XP_004047379.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial
[Gorilla gorilla gorilla]
Length = 417
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 166 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKT 225
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L ++L ++ L LS LV P
Sbjct: 226 RVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPR 285
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 286 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 340
>gi|62732919|gb|AAX95038.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77549195|gb|ABA91992.1| hypothetical protein LOC_Os11g10020 [Oryza sativa Japonica Group]
Length = 309
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 485 NVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM-GRINHRCKM 543
N++ + KR P +L S D L +KI++L + LE +V L Y + R+ R +
Sbjct: 139 NILIAVGKR-PTILGLSMDNLRRKIEFLVTEVGLKLECIVECLGILRYSLEKRMVPRHSV 197
Query: 544 YVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEGPAMWESLKKSSNSS 595
LR RG+ K SL ++ +A F ++D H + M L + N+S
Sbjct: 198 MEILRARGLMKKGASLYGLIMQGEADFVARYIDTHKD---MVHGLADAYNAS 246
>gi|332238391|ref|XP_003268380.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial
[Nomascus leucogenys]
Length = 417
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 166 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKT 225
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L ++L ++ L LS LV P
Sbjct: 226 RVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPR 285
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 286 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 340
>gi|284434657|gb|ADB85369.1| putative PDE191 [Phyllostachys edulis]
Length = 332
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 8/183 (4%)
Query: 185 LCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAY--ENLGLSKNTVIKLVSCCPSLLI 242
L + G +G+M + D G AS +W Y N+ + + + +V+ CP +L
Sbjct: 15 LREKGFDEEAIGRMSKRCKNLQSLDAGE-ASGVWDYLLNNVKIERRKLRHVVTKCPKVLT 73
Query: 243 GGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETL----DFLYKIGYNEVQL 298
VD + V ++ L L K + + + + V E L F +G +E QL
Sbjct: 74 VSVDDKLVPTVQCLTTLQAKPGEVAQAVVKFPQILFHSVEEKLCPLLAFFQTLGISEKQL 133
Query: 299 LNLFKTNPALVFEGSGQKVYVLFGRLLKLGL-KMNEVYSLFSQNPQILSSKFVKNLLQAV 357
L NP L+ K L+ LG+ K + + ++ P I+ K L
Sbjct: 134 AKLLMVNPRLISYSIEAKFSQTVDFLVGLGIDKEGMIGKILAKEPYIMGYSVDKRLRPTA 193
Query: 358 GFL 360
FL
Sbjct: 194 EFL 196
>gi|194037024|ref|XP_001929306.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial [Sus
scrofa]
Length = 414
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ D L+R I + F + LG+ ++L L ++ S+D L+N
Sbjct: 163 LSKIEKHPDAANLLLRLDFEKDIKQILLFLKDLGMEDNQLGTFLTKNYAIFSED---LEN 219
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
Y ++ + +M A + L ++L ++ L LS L+
Sbjct: 220 LKTRVAYLQSKNFSKADIAQMVRNAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLIIR 279
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLY 289
P LL G ++ V E +K ELGFK++ I +P + N +++ET D+++
Sbjct: 280 LPRLLTGSLEP----VKENMKVYRLELGFKHNEIQHMVTKIPKMLTANKRKLTETFDYVH 335
Query: 290 KI 291
+
Sbjct: 336 NV 337
>gi|351702815|gb|EHB05734.1| mTERF domain-containing protein 1, mitochondrial [Heterocephalus
glaber]
Length = 417
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 62/292 (21%)
Query: 25 VFFPVSNEKTSIMQKQNAFFIPVRVRSFCS-SRLTHQPKVSLAESTQ-------PPASLV 76
PV NE++ I Q+ +F + + L+ +VS E+ Q PPAS
Sbjct: 86 TLLPVVNEQSEITQELPSFDSELSLEDLDDLPPLSPLQQVSEEEAIQIIADPLLPPASFT 145
Query: 77 ASRVSRLARTEAQEVLFDYLHSTRSLGYM-----DAEHISKNSPDFVLNLLSKIDSGKDV 131
L DY+ + +L + D I K+ PD NLL ++D KD+
Sbjct: 146 ---------------LRDYVDHSETLQKLVLLGVDLSKIEKH-PD-TANLLLRLDFEKDI 188
Query: 132 TRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDNFHVLCDY--- 188
L+ F + LGL ++L L ++ S+D L+N Y
Sbjct: 189 KPILL-------------FLKDLGLEDNQLGGFLTKNYAIFSED---LENLETRVAYLQS 232
Query: 189 -GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPSLLIGGVD 246
++ + +M +A + L ++L ++ L LS LV P LL G ++
Sbjct: 233 KNFSKADIAQMVRKAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLLTGSLE 292
Query: 247 SRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
V E +K ELGFK++ I +P + N ++++T D+++ +
Sbjct: 293 P----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKRKLTKTFDYVHNV 340
>gi|297817508|ref|XP_002876637.1| hypothetical protein ARALYDRAFT_907730 [Arabidopsis lyrata subsp.
lyrata]
gi|297322475|gb|EFH52896.1| hypothetical protein ARALYDRAFT_907730 [Arabidopsis lyrata subsp.
lyrata]
Length = 576
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 475 DCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM 534
+ + G + + ++KR P + S + ++KK D+L + + L P L Y M
Sbjct: 280 ETFLSLGFSRDEFKMMIKRHPPCIAYSAESVKKKADFLMKEMKWSL-----CPKMLSYSM 334
Query: 535 -GRINHRCKMYVWLRERG-VAKPTLSLSTILACSDAKFEKYFVDVHPE 580
RI RC + L +G + S +T+L C++ F K FV H +
Sbjct: 335 EERILPRCNVIKALMSKGLIGSEFPSAATVLICTNQSFLKKFVRKHED 382
>gi|290968874|ref|ZP_06560411.1| transcription-repair coupling factor [Megasphaera genomosp. type_1
str. 28L]
gi|290781170|gb|EFD93761.1| transcription-repair coupling factor [Megasphaera genomosp. type_1
str. 28L]
Length = 1095
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 299 LNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVG 358
L++ N L+++ + L+ ++G + Y+ F PQ + S+ + L+A+
Sbjct: 823 LDVANANTILIYDADHFGLSQLYQMRGRVGRSHHLAYAYFFYRPQKVLSEVAEKRLEAIK 882
Query: 359 FLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFH-- 416
E+G G K + + E+ G+ +L G + + VG CQ+++ ++ H
Sbjct: 883 EFTELGSGFK----IAMRDLEIRGAGNLLGREQHGNIAGVGFAMYCQMLEAAIKRVKHGE 938
Query: 417 --LASKTEVKIDEQVDCQNPSKDV----EKTEFLLRLGYVENSEEVTKALKQFRGRGDQL 470
+ + E +D QVD + +K E RL + +E+ + LK ++L
Sbjct: 939 EKITAPLETVLDIQVDAFLDDAYIPVSGQKIEMYQRLALADTEKEL-QELK------NEL 991
Query: 471 QERFDCL---VQAGLDSNVVRNIVKRAPMV-LNQSKDVLEKK 508
Q+R+ VQ L +R K+ +V L+Q K++LE K
Sbjct: 992 QDRYGKATPPVQRLLRVAAIRMRAKQLGIVLLSQKKELLEIK 1033
>gi|225436749|ref|XP_002269711.1| PREDICTED: uncharacterized protein LOC100240848 [Vitis vinifera]
Length = 502
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 124/356 (34%), Gaps = 84/356 (23%)
Query: 222 NLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQV 281
N G + + K+VS P LLI + + LE GF + R + G S +
Sbjct: 124 NYGCTNTHISKIVSKYPLLLIANSEKTLLPKLEFFSSAGFSGPDLVRIVVGSPSI----L 179
Query: 282 SETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQN 341
+L+ YN ++ +++ N F S Y L G+ V + N
Sbjct: 180 KRSLENHLIPSYNFLKSMDMVHENIVKAFSRS----YWLTGK---------SVQDTIASN 226
Query: 342 PQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRE 401
+IL EIG+ M +IS++V MH
Sbjct: 227 VEILK---------------EIGVPMSNISSLVAMH------------------------ 247
Query: 402 SLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALK 461
P +F QN K E + +G KA++
Sbjct: 248 ---------PCAVF----------------QNREKFSRSVEKVFEMGINPLRVTFLKAVQ 282
Query: 462 QFRGRGDQLQE-RFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPL 520
G + + E + Q G + + + + P+ + S+ + +D+L N + +
Sbjct: 283 VICGVAESMWEHKMQVYRQWGFTDDEIMLMFRLDPLCIKSSEKKIMSVMDFLVNKMGWEP 342
Query: 521 ESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFV 575
S+ +P + +I RC + L+ +G+ K L L IL CS+ F FV
Sbjct: 343 ASIARYPTVFLRSLEKKIIPRCSVVKVLQMKGLVKKDLCLG-ILGCSEENFFDKFV 397
>gi|335048956|ref|ZP_08541968.1| transcription-repair coupling factor [Megasphaera sp. UPII 199-6]
gi|333764739|gb|EGL42125.1| transcription-repair coupling factor [Megasphaera sp. UPII 199-6]
Length = 1095
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 299 LNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVG 358
L++ N L+++ + L+ ++G + Y+ F PQ + S+ + L+A+
Sbjct: 823 LDVANANTILIYDADHFGLSQLYQMRGRVGRSHHLAYAYFFYRPQKVLSEVAEKRLEAIK 882
Query: 359 FLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFH-- 416
E+G G K + + E+ G+ +L G + + VG CQ+++ ++ H
Sbjct: 883 EFTELGSGFK----IAMRDLEIRGAGNLLGREQHGNIAGVGFAMYCQMLEAAIKRVKHGE 938
Query: 417 --LASKTEVKIDEQVDCQNPSKDV----EKTEFLLRLGYVENSEEVTKALKQFRGRGDQL 470
+ + E +D QVD + +K E RL + +E+ + LK ++L
Sbjct: 939 EKITAPLETVLDIQVDAFLDDAYIPVSGQKIEMYQRLALADTEKEL-QELK------NEL 991
Query: 471 QERFDCL---VQAGLDSNVVRNIVKRAPMV-LNQSKDVLEKK 508
Q+R+ VQ L +R K+ +V L+Q K++LE K
Sbjct: 992 QDRYGKATPPVQRLLRVAAIRMRAKQLGIVLLSQKKELLEIK 1033
>gi|303274422|ref|XP_003056531.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462615|gb|EEH59907.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 625
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 185 LCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYEN-LGLSKNTVIKLVSCCPSLLIG 243
L G+ ++ K+ V E+FR + +++ +N LG + KL+ P++L+
Sbjct: 267 LVSLGLSTCELEKVLVNCEEVFRRPVAKVVARVEYLQNELGFEGAELRKLIKKEPNVLLQ 326
Query: 244 GVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQVSETLDFLYKIGY-------NEV 296
+ + L ELG + + L + V L + ++ Y ++
Sbjct: 327 R-NRHSIPRCRYLMELGIPAEKLPTLLRKQPQILHLSVQNGL--MPRVAYFKNELLVSDA 383
Query: 297 QLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQA 356
+++ L + NPA++ +++ L LG+ V + ++P+IL F L +
Sbjct: 384 EVVKLIERNPAVLTFSIEKQIKPRVDFLKDLGISHKSVVKMIVRHPRILQYSF-DGLGEH 442
Query: 357 VGFLIEIGMGMKDISNMVLMHAEL 380
+ FL+ IGM +DI + V ++L
Sbjct: 443 INFLMSIGMDEEDIVHTVTRLSQL 466
>gi|242057811|ref|XP_002458051.1| hypothetical protein SORBIDRAFT_03g026200 [Sorghum bicolor]
gi|241930026|gb|EES03171.1| hypothetical protein SORBIDRAFT_03g026200 [Sorghum bicolor]
Length = 382
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 483 DSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDMGR-INHRC 541
D+ V R +V+R P VL +S + ++ ++L + + + P L Y + R + R
Sbjct: 266 DAEVAR-MVQRNPCVLLRSTETIQGICEFLTKVVGVDTKYIQGLPTILMYSLERRLVPRH 324
Query: 542 KMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPEG-PAMWESLKKSSN 593
+ L+E+G+ + LS+ T++A SD+ F +V H + P + ++ + N
Sbjct: 325 YVMKVLQEKGLIRKDLSIYTMVASSDSVFCSRYVHPHKDVLPGLADAYASACN 377
>gi|359482045|ref|XP_002280962.2| PREDICTED: uncharacterized protein LOC100254596 [Vitis vinifera]
Length = 335
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 468 DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQS-KDVLEKKIDYLKNYLCYPLESVVAF 526
++L R D L + G ++V+R P + N S KD LE K +Y + L + F
Sbjct: 208 EKLIPRIDYLEKIGFSKRDAVSMVRRFPQLFNHSIKDNLEPKFNYFVVEMGRELRELKEF 267
Query: 527 PAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFE 571
P Y + + RI R + V E+GV P L +L ++AKF
Sbjct: 268 PQYFSFSLENRIKPRHQCCV---EKGVCFP---LPIMLKTTEAKFH 307
>gi|357124752|ref|XP_003564061.1| PREDICTED: uncharacterized protein LOC100838072 [Brachypodium
distachyon]
Length = 384
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 122/300 (40%), Gaps = 62/300 (20%)
Query: 324 LLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGS 383
L LGL ++V ++ S +P+ L SK + L V L ++G+ DI+ ++L+ A ++ S
Sbjct: 81 LSSLGLSGSDVAAVVSADPRFLCSKVDETLAPRVAQLRDLGLSDSDIARLILVGAPVLRS 140
Query: 384 CSLKGPKTVCSKLK-----VGRESLCQIIKDDPLKLFHLASKTEV--------KIDEQVD 430
C + S+L+ VG +L HL S+ + ID V
Sbjct: 141 CD------IASRLQFWIPLVGSFD----------ELIHLTSRGALGGSSILRRDIDAVVK 184
Query: 431 --------CQNPSKDVEKTEFLLRLGYVENSEEVTKALKQF------RGRG--------- 467
C +D+ KT V + +++ +++ RG G
Sbjct: 185 PNIELLLRCGLSIRDLAKTGLSGMWAIVSSPDKLKVLVRRAEELGVPRGSGQFKYALATV 244
Query: 468 -----DQLQERFDCLVQA-GLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLE 521
+++ + + L +A G + V+ V + P +L S L +++L +
Sbjct: 245 SCMSQEKIASKIELLKKALGCSDDQVKFAVVKHPSILRASDGNLRSTVEFLVTKVGLEPN 304
Query: 522 SVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDVHPE 580
+V P L Y + GR+ R + L +G++ S++ +++ F ++D + E
Sbjct: 305 YIVHRPGLLSYSLEGRLVPRFIIMKILHSKGISVDYCSMAV---ATESYFISRYIDYYEE 361
>gi|449458785|ref|XP_004147127.1| PREDICTED: uncharacterized protein LOC101219984 [Cucumis sativus]
Length = 373
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 121/312 (38%), Gaps = 44/312 (14%)
Query: 311 EGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDI 370
E S Q+ + G L G ++ +L S+ P+IL S+ NL FL EIG +
Sbjct: 60 EKSIQQYEAVIGFLKSQGFDNLQIANLVSKRPKILGSRVSTNLKPKFEFLQEIGFVGPLL 119
Query: 371 SNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDP-----------LKLFHLAS 419
++L + L GS ++ S+LK L +I++ D L + L
Sbjct: 120 PKLILSNHWLAGS-------SLDSQLKPSFFFLKEILEPDEQVTAAVSRFPGLLICDLKG 172
Query: 420 KTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRG------------ 467
+ ID PS+++ KT L + N + + A+K+ + G
Sbjct: 173 NFKSNIDVLASEGVPSRNIAKTIALNPRAIMLNVDRMINAVKRVKELGLEPKARTFVHAV 232
Query: 468 --------DQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSK-DVLEKKIDYLKNYLCY 518
+++ + + G+ + + KR P L S+ DV D+ N
Sbjct: 233 RVVLSMGDSTWKKKINVMKSLGVSEKEIFSAFKRFPPYLTCSEGDV----ADFCSNTAKL 288
Query: 519 PLESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEKYFVDV 577
S++++P Y + R+ RCK+ L+ + + K S + EKY V
Sbjct: 289 DPASLISYPVLFKYSVHKRLQPRCKVIEVLKMKNLLKIKRIASVFVKGEKEFVEKYIVKH 348
Query: 578 HPEGPAMWESLK 589
E P + + K
Sbjct: 349 LDEIPNLMDIYK 360
>gi|296226972|ref|XP_002759171.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial
[Callithrix jacchus]
Length = 417
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ D L+R I + F + +G+ ++L L ++ S+D L+N
Sbjct: 166 LSKIEKHPDAANLLLRLDFEADIKQILLFLKDVGIEDNQLGAFLTKNYAIFSED---LEN 222
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
Y ++ + +M +A + L ++L ++ L LS LV
Sbjct: 223 MKTRVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELQLSVKKTRDLVVR 282
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLY 289
P LL G ++ V E +K ELGFK++ I +P + N +++ET D+++
Sbjct: 283 LPRLLTGSLEP----VKENMKVYHLELGFKHNEIQHMITKIPKMLTANKRKLTETFDYVH 338
Query: 290 KI 291
+
Sbjct: 339 NV 340
>gi|4680663|gb|AAD27721.1|AF132946_1 CGI-12 protein [Homo sapiens]
Length = 327
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPR-HLMFLSDDEVLLD 180
LSKI+ + L+R I + F + +G+ ++L L + H +F D E L
Sbjct: 76 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKT 135
Query: 181 NFHVLCDYGIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSCCPS 239
L ++ + +M +A + L +++ ++ L LS LV P
Sbjct: 136 RVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNQIGFFQKELELSVKKTRDLVVRLPR 195
Query: 240 LLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLYKI 291
LL G ++ V E +K ELGFK++ I +P + N +++ET DF++ +
Sbjct: 196 LLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNV 250
>gi|89892935|ref|YP_516422.1| hypothetical protein DSY0189 [Desulfitobacterium hafniense Y51]
gi|89332383|dbj|BAE81978.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 1178
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 312 GSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDIS 371
G GQ +Y L GR+ G YS F PQ + ++ + L A+ E G G+K
Sbjct: 920 GLGQ-LYQLRGRV---GRSNRRAYSYFLYKPQKVLTEVAEKRLAAIREFTEFGSGLK--- 972
Query: 372 NMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKD--DPLKLFHLASKTEVKIDEQV 429
+ + E+ G+ +L G + +G E Q++K+ LK + K E I+ QV
Sbjct: 973 -IAMRDLEIRGAGNLIGAQQHGHLAALGFELYSQMLKEAVQELKGEQVEEKIETSIEVQV 1031
Query: 430 DCQNPSKDVE----KTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSN 485
D P + K R+ ++N E+++ + D+L +RF G
Sbjct: 1032 DAYLPDIYIGERQLKAALYQRMVAIDNEEDLSMMI-------DELIDRF------GTPPR 1078
Query: 486 VVRNIVK 492
V N++K
Sbjct: 1079 EVENLLK 1085
>gi|423075756|ref|ZP_17064470.1| transcription-repair coupling factor [Desulfitobacterium hafniense
DP7]
gi|361853168|gb|EHL05349.1| transcription-repair coupling factor [Desulfitobacterium hafniense
DP7]
Length = 1197
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 312 GSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDIS 371
G GQ +Y L GR+ G YS F PQ + ++ + L A+ E G G+K
Sbjct: 939 GLGQ-LYQLRGRV---GRSNRRAYSYFLYKPQKVLTEVAEKRLAAIREFTEFGSGLK--- 991
Query: 372 NMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKD--DPLKLFHLASKTEVKIDEQV 429
+ + E+ G+ +L G + +G E Q++K+ LK + K E I+ QV
Sbjct: 992 -IAMRDLEIRGAGNLIGAQQHGHLAALGFELYSQMLKEAVQELKGEQVEEKIETSIEVQV 1050
Query: 430 DCQNPSKDVE----KTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSN 485
D P + K R+ ++N E+++ + D+L +RF G
Sbjct: 1051 DAYLPDIYIGERQLKAALYQRMVAIDNEEDLSMMI-------DELIDRF------GTPPR 1097
Query: 486 VVRNIVK 492
V N++K
Sbjct: 1098 EVENLLK 1104
>gi|147817763|emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera]
Length = 2634
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 129/366 (35%), Gaps = 85/366 (23%)
Query: 222 NLGLSKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKELGFKNDWIGRYLPGKGSYNWDQV 281
N G + + K+VS P LLI + + LE GF + R + G S +
Sbjct: 89 NYGCTNTHISKIVSKYPLLLIANSEKTLLPKLEFFXSAGFSGPDLVRIVVGSPSI----L 144
Query: 282 SETLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQN 341
+L+ YN ++ +++ N F S Y L G+ V + N
Sbjct: 145 KRSLENHLIPSYNFLKSMDMVHENIVKAFSRS----YWLTGK---------SVQDTIASN 191
Query: 342 PQILSSKFVKNLLQAVGFLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRE 401
+IL EIG+ M +IS++V MH
Sbjct: 192 VEILK---------------EIGVPMSNISSLVAMH------------------------ 212
Query: 402 SLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALK 461
P +F QN K E + +G KA++
Sbjct: 213 ---------PCAVF----------------QNREKFSRSVEKVFEMGINPLRVTFLKAVQ 247
Query: 462 QFRGRGDQLQE-RFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPL 520
G + + E + Q G + + + + P+ + S+ + +D+L N + +
Sbjct: 248 VICGVAESMWEHKMQVYRQWGFTDDEIMLMFRLDPLCIKSSEKKIMSVMDFLVNKMGWEP 307
Query: 521 ESVVAFPAYLCYDM-GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAK-FEKYFVDVH 578
S+ +P + +I RC + L+ +G+ K L L IL CS+ F+K+ V
Sbjct: 308 ASIARYPTVFLRSLEKKIIPRCSVVKVLQMKGLVKKDLCLG-ILGCSEENFFDKFVVKYE 366
Query: 579 PEGPAM 584
+ P +
Sbjct: 367 QDVPEL 372
>gi|449433393|ref|XP_004134482.1| PREDICTED: uncharacterized protein LOC101209993 [Cucumis sativus]
Length = 371
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 172 LSDDEVLLDN-----FHVLCDYGIPRSKMGKMYVEATEIFR-HDRGVLASKLWAYENLGL 225
L + V L+N +L ++G S++ + +IF + +L+ KL +++ GL
Sbjct: 48 LPSNPVQLNNNSKAVIGLLANHGFSESQISDLAKRYPKIFSMNTEKILSPKLLFFQSKGL 107
Query: 226 SKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKE-LGFKNDWIGRYLPGKGSYNWD---QV 281
S ++K V P +L G ++ R + + ++ LG + + G WD V
Sbjct: 108 SSPEIVKFVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSV 167
Query: 282 SETLDFLYKIGYNEVQLLNLFKTNPALVFEGS 313
++ L +IG + + + + P + S
Sbjct: 168 GPNIEILKQIGVPDSNISSYLQRQPKMFLTSS 199
>gi|219666201|ref|YP_002456636.1| transcription-repair coupling factor [Desulfitobacterium hafniense
DCB-2]
gi|219536461|gb|ACL18200.1| transcription-repair coupling factor [Desulfitobacterium hafniense
DCB-2]
Length = 1197
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 312 GSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVGFLIEIGMGMKDIS 371
G GQ +Y L GR+ G YS F PQ + ++ + L A+ E G G+K
Sbjct: 939 GLGQ-LYQLRGRV---GRSNRRAYSYFLYKPQKVLTEVAEKRLAAIREFTEFGSGLK--- 991
Query: 372 NMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKD--DPLKLFHLASKTEVKIDEQV 429
+ + E+ G+ +L G + +G E Q++K+ LK + K E I+ QV
Sbjct: 992 -IAMRDLEIRGAGNLIGAQQHGHLAALGFELYSQMLKEAVQELKGEQVEEKIETSIEVQV 1050
Query: 430 DCQNPSKDVE----KTEFLLRLGYVENSEEVTKALKQFRGRGDQLQERFDCLVQAGLDSN 485
D P + K R+ ++N E+++ + D+L +RF G
Sbjct: 1051 DAYLPDIYIGERQLKAALYQRMVAIDNEEDLSMMI-------DELIDRF------GTPPR 1097
Query: 486 VVRNIVK 492
V N++K
Sbjct: 1098 EVENLLK 1104
>gi|449467805|ref|XP_004151613.1| PREDICTED: uncharacterized protein LOC101204411 [Cucumis sativus]
Length = 371
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 172 LSDDEVLLDN-----FHVLCDYGIPRSKMGKMYVEATEIFRHD-RGVLASKLWAYENLGL 225
L + V L+N +L ++G S++ + +I + +L+ KL +++ GL
Sbjct: 48 LPSNAVQLNNNSKAVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGL 107
Query: 226 SKNTVIKLVSCCPSLLIGGVDSRFVKVLEKLKE-LGFKNDWIGRYLPGKGSYNWD---QV 281
S ++KLV P +L G ++ R + + ++ LG + + G WD V
Sbjct: 108 SSPEIVKLVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSV 167
Query: 282 SETLDFLYKIGYNEVQLLNLFKTNPALVFEGS 313
++ L +IG + + + + P + S
Sbjct: 168 GPNIEILKQIGVPDSNISSYLQRQPKMFLTSS 199
>gi|14190447|gb|AAK55704.1|AF378901_1 AT4g02990/T4I9_13 [Arabidopsis thaliana]
gi|15450557|gb|AAK96456.1| AT4g02990/T4I9_13 [Arabidopsis thaliana]
Length = 158
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 475 DCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYPLESVVAFPAYLCYDM 534
D L + G + R +V P VL + +++ +Y + + PL+ +V FPA+ Y +
Sbjct: 17 DFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGL 76
Query: 535 -GRINHRCKMYVWLRERGVAKPTLSLSTILACSDAKFEK 572
+ R ++ SL+ +L CSD KFE+
Sbjct: 77 ESTVKPR------HKKIIKKGIKCSLAWMLNCSDEKFEQ 109
>gi|297683342|ref|XP_002819345.1| PREDICTED: mTERF domain-containing protein 1, mitochondrial [Pongo
abelii]
Length = 417
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 122 LSKIDSGKDVTRSLMRFLRYNPINEFEPFFESLGLSQSELSPLLPRHLMFLSDDEVLLDN 181
LSKI+ + L+R I + F + +G+ ++L L ++ S+D L+N
Sbjct: 166 LSKIEKHPEAANLLLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSED---LEN 222
Query: 182 FHVLCDY----GIPRSKMGKMYVEATEIFRHDRGVLASKLWAYE-NLGLSKNTVIKLVSC 236
+ Y ++ + +M +A + L ++L ++ L LS L+
Sbjct: 223 LKIRVAYLHSKNFSKADVAQMVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLIVR 282
Query: 237 CPSLLIGGVDSRFVKVLEKLK----ELGFKNDWIGRY---LPGKGSYNWDQVSETLDFLY 289
P LL G ++ V E +K ELGFK++ I +P + N +++ET DF++
Sbjct: 283 LPRLLTGSLEP----VKENMKVYRLELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVH 338
Query: 290 KI 291
+
Sbjct: 339 NV 340
>gi|342218442|ref|ZP_08711056.1| transcription-repair coupling factor [Megasphaera sp. UPII 135-E]
gi|341589854|gb|EGS33116.1| transcription-repair coupling factor [Megasphaera sp. UPII 135-E]
Length = 1095
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 94/218 (43%), Gaps = 15/218 (6%)
Query: 299 LNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQILSSKFVKNLLQAVG 358
L++ N +V++ + L+ ++G N Y+ + S+ + L A+
Sbjct: 824 LDVANANTIIVYDADHFGLSQLYQMRGRVGRSHNLAYAYLCYRKNKVLSEIAEKRLSAIK 883
Query: 359 FLIEIGMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVGRESLCQIIKDDPLKLFH-L 417
E+G G K + + E+ G+ +L G + + VG CQ+++ +L + +
Sbjct: 884 EFTELGSGFK----IAMRDLEIRGAGNLLGREQHGNIAGVGFSMYCQMLEGAIKRLQNGI 939
Query: 418 ASKTE-------VKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKALKQFRGRGDQL 470
+ +TE ++++ +D + + + +K + RL + S+E+ K+ R +
Sbjct: 940 SDETERIETVLDIQVNAYIDNEYITNNGQKIDIYQRLAIADTSDEINALEKELTDRYGTM 999
Query: 471 QERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKK 508
+ L+Q + R K +++Q KD +E K
Sbjct: 1000 TDPVIALLQVAIIRVAAR---KLGITLISQKKDYVEIK 1034
>gi|222629639|gb|EEE61771.1| hypothetical protein OsJ_16333 [Oryza sativa Japonica Group]
Length = 392
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 117/310 (37%), Gaps = 25/310 (8%)
Query: 284 TLDFLYKIGYNEVQLLNLFKTNPALVFEGSGQKVYVLFGRLLKLGLKMNEVYSLFSQNPQ 343
L FL G Q+ + P L+ + F + LGL +V LF+ P
Sbjct: 87 ALAFLRSQGLTRAQVREVVSWKPELLLSDVDATLDPKFRAVRALGLGRADVARLFALYPP 146
Query: 344 ILSSKFVKNLLQAVGFLIEI----GMGMKDISNMVLMHAELMGSCSLKGPKTVCSKLKVG 399
L+ NLL V F I+ + MK ++ L+ + L+ T+ S L V
Sbjct: 147 ALTYGIHTNLLPRVLFWIDFLGSAKLLMKWLAKTWLLRYSV--DALLRNLSTLRS-LGVQ 203
Query: 400 RESLCQIIKDDPLKLFHLASKTEVKIDEQVDCQNPSKDVEKTEFLLRLGYVENSEEVTKA 459
+ + ++ P + ++ + + C P F E S
Sbjct: 204 QSRITTTVRMQPTLITQTPARFQKLVGRVEACGVPPSSGCTCGFFALHNVSEGS------ 257
Query: 460 LKQFRGRGDQLQERFDCLVQAGLDSNVVRNIVKRAPMVLNQSKDVLEKKIDYLKNYLCYP 519
FR + + C + D+ + +RAP ++ +L +K+++L
Sbjct: 258 ---FRAKKAAVVGAAGC-TEEEFDA-----MFRRAPCLVFVPAALLRRKVEFLMAEAGCD 308
Query: 520 LESVVAFPAYLCYDMG-RINHRCKMYVWLRERGVA-KPTLSLSTILACSDAKF-EKYFVD 576
+V P L +G R+ RC++ LR RGV +L +++ + KF E+Y +
Sbjct: 309 ATHIVTNPVLLTLSLGKRMAPRCRVVEALRSRGVGIGKKANLGSVMRYPEDKFVERYVLR 368
Query: 577 VHPEGPAMWE 586
E P + E
Sbjct: 369 YKEEVPELLE 378
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,671,793,218
Number of Sequences: 23463169
Number of extensions: 350051991
Number of successful extensions: 854021
Number of sequences better than 100.0: 392
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 312
Number of HSP's that attempted gapping in prelim test: 852864
Number of HSP's gapped (non-prelim): 1084
length of query: 595
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 447
effective length of database: 8,886,646,355
effective search space: 3972330920685
effective search space used: 3972330920685
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)