BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007626
(595 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 287/535 (53%), Positives = 367/535 (68%), Gaps = 11/535 (2%)
Query: 58 VRASTIAAIAHFHGLANGGS--RPFDEKEVNYRCSNEFWFVKVVCTLLLRSSYLSDTCAR 115
+R + AIAHFH ++GG+ RP E W VK+V TL + SD C
Sbjct: 2 IRTTFATAIAHFHTHSHGGAQARPLQNNTREVIHCPEAWLVKIVSTLFVYRVPDSDLCFC 61
Query: 116 YLCEKLSPLNSLEVIKRLD-NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
YL + L+P S EV+K+LD NP +G +F EFSR L++ HSF TYNL+ RSLC+ GLHD
Sbjct: 62 YLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDL 121
Query: 175 VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLN 234
+F+ M+SDG PN+ ++ F VSS GK A LL Q EV + NSLLN
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ--SFEVEGCCMVVNSLLN 179
Query: 235 ALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
LVK + ++A+ +F E+ R S DT TFNILI+GL +G+ +KA E M FGC P
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP 239
Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
DIVTYNTLI G C+ NE+ + E+ K+VK S SPDVVTYTS+ISGYCK GKM +A+ +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
++M GI P+ VTFNVL+DG+ K G M++AE +R +M+SFG PDVVTF+SLIDGYCR
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
GQ++QG +L +EM + + PN +T++ILINALC ENRL AR L QL D++P+PFM
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
YNPVIDGFCKAG V+EANVIV EME+K+CKPDK+TFTILIIGHCMKGRM EA+SIF+KM+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAVPLRTNT 589
IGC+PD ITV+SL+SCLLK GM EA+ + Q A + Q+ VPL T T
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQS------NNVVPLETKT 528
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 218/425 (51%), Gaps = 3/425 (0%)
Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
F EF V + N + +YN+V+ +C++G + M G+ P+ V+
Sbjct: 234 FREFPEVGVCWNVA--SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
R G+ D L+ + + ++++Y S++ L + EA F E R PDT
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 351
Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
+ LI G + G+++ A +FFY+M S +PD++TY +ISG C++ ++ +L E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
+ F PD VT+T +I+GYCK G M A ++N M G P+ VT+ LIDG K G
Sbjct: 412 M-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
++ SA + M G P++ T++S+++G C++G + + +KL E + L+ + T+T
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
L++A CK ++ A+ LK++ L P +N +++GFC G +++ ++ M K
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
P+ TF L+ +C++ + A +I+ M G PD T +L+ K EA
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 562 FRIMQ 566
+ + Q
Sbjct: 651 WFLFQ 655
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 197/401 (49%), Gaps = 1/401 (0%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
Y ++ LC + + F M G LP++ + + + G AA +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
++T Y ++++ + + EA +F E F +PD+ TF LI G + G +K
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
AF M GCSP++VTY TLI GLC+ ++ +ELL E+ +K P++ TY S+
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSI 497
Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
++G CK G +++A + E + G+ VT+ L+D + K G M A+ + + ML G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
P +VTF+ L++G+C +G L G KL + M K ++PN TF L+ C N L A
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
K + + P Y ++ G CKA N+ EA + EM+ K T+++LI G
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
+ + +EA +F++M R G A D + KG P+
Sbjct: 678 KRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 206/410 (50%), Gaps = 2/410 (0%)
Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR-AGKCDAAKGLLS 215
+ +++ + L + GL + VF+ M + G + + +++ + K A +
Sbjct: 176 RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 235
Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
+F V + YN +++ + + EA ++ PD +++ ++ G R G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
E+ K ++ M G P+ Y ++I LCR+ ++A E E+ + PD V Y
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVY 354
Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
T++I G+CK G + A+ + EM+S I P +T+ +I GF ++G+MV A + M
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
G PD VTF+ LI+GYC+ G + ++ + M SPNV T+T LI+ LCKE L+
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
A L ++ L P F YN +++G CK+GN++EA +V E E D VT+T L+
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
+C G M +A I +ML G P +T N L++ GM + +++
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 72/172 (41%)
Query: 152 LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
LN TY +M + C+ G D Q + M G P ++ G + +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
LL+ + + +NSL+ +NN A ++K+ PD T+ L++G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
+ +K+A+ F +M G S + TY+ LI G + + E+ +++
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 241/490 (49%), Gaps = 10/490 (2%)
Query: 83 KEVNYRCSNEFWFVKVVC-TLLLRSSYLSDTCARYLCEKLSPLNSLEVIKRLDNPKLGLK 141
K +N+ ++F+ ++ C TL + + + A+ L E ++ K LD+ L
Sbjct: 67 KFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAA-------KTLDDEYASLV 119
Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
F + ++LV++S + L D + ++ G +P + +
Sbjct: 120 FKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDAT 179
Query: 202 IRAGK-CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPD 260
IR+ + A+ + + +V+ + F YN L+ N D A+ +F + P+
Sbjct: 180 IRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN 239
Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
T+N LI G ++ ++ F+ M G P++++YN +I+GLCR + +L
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
E+ + +S D VTY ++I GYCK G +A ++ EM G+ PS +T+ LI K
Sbjct: 300 EMNRRG-YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
GNM A ++M G P+ T+++L+DG+ + G +N+ ++ EM SP+V T+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
LIN C ++ DA L+ +K L P Y+ V+ GFC++ +VDEA + EM E
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
K KPD +T++ LI G C + R EA ++ +MLR+G PD+ T +LI+ G +
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 561 AFRIMQRASE 570
A ++ E
Sbjct: 539 ALQLHNEMVE 548
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 215/418 (51%), Gaps = 16/418 (3%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
+YN+V+ LC G V V M G+ + + + G A + ++
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+T S Y SL++++ K N + A+ + P+ T+ L+ G S+ G +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+A+ +M G SP +VTYN LI+G C ++ +L+++K K SPDVV+Y++
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG-LSPDVVSYST 455
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
V+SG+C+ +D+A + EM GIKP +T++ LI GF + A + E ML G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
PD T+++LI+ YC G L + L+L +EM K + P+V T+++LIN L K++R +A+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 458 RFLKQLKWNDLVPKPFMYNPVID---------------GFCKAGNVDEANVIVAEMEEKR 502
R L +L + + VP Y+ +I+ GFC G + EA+ + M K
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
KPD + I+I GHC G + +A +++ +M++ G +TV +L+ L K G NE
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 210/424 (49%), Gaps = 16/424 (3%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN+++R C G D +FD M + G LPN + + K D LL
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ + YN ++N L ++ E ++ E R D T+N LI+G + G
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+A +M G +P ++TY +LI +C+ + R E L +++ + P+ TYT+
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG-LCPNERTYTT 385
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
++ G+ + G M++A + EMN G PS VT+N LI+G G M A + E M G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
PDVV++S+++ G+CR+ +++ L++ EM K + P+ T++ LI C++ R +A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+++ L P F Y +I+ +C G++++A + EM EK PD VT+++LI G
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS-----------CLLKG----GMPNEAF 562
+ R EA + K+ P D+T ++LI L+KG GM EA
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 563 RIMQ 566
++ +
Sbjct: 626 QVFE 629
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 126/331 (38%), Gaps = 49/331 (14%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
S TYN ++ C G + V + M+ G P+ +S R+ D A +
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
+ + T Y+SL+ +Q EA +++E R+ PD +T+ LI
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL---CRVNEVAR----------------G 315
G+++KA + +M G PD+VTY+ LI+GL R E R
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 316 HELLKE---VKFKSEFS---------------------------PDVVTYTSVISGYCKL 345
H L++ ++FKS S PD Y +I G+C+
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
G + KA +Y EM G VT L+ K G + + +L L +
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA 713
Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
L++ R G ++ L + EM PN
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/143 (19%), Positives = 51/143 (35%)
Query: 153 NHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG 212
N FK+ +++ C G+ VF+ M H P+ + RAG A
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
L + + T +L+ AL K+ +E + R + +L++
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINH 721
Query: 273 RIGEVKKAFEFFYDMGSFGCSPD 295
R G + + +M G P+
Sbjct: 722 REGNMDVVLDVLAEMAKDGFLPN 744
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 210/420 (50%), Gaps = 8/420 (1%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN V+ LC+ G ++ + VF M G P+S + + G + + S
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
R +V ++S+++ + N D+A+ F PD + ILIQG R G +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
A +M GC+ D+VTYNT++ GLC+ + +L E+ ++ F PD T T
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF-PDSYTLTI 485
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I G+CKLG + A ++ +M I+ VT+N L+DGFGKVG++ +A+ + M+S
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
LP +++S L++ C G L + ++ DEM KN+ P V +I C+ +D
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR--CKPDKVTFTILII 515
FL+++ VP YN +I GF + N+ +A +V +MEE++ PD T+ ++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQ 575
G C + +M EA + KM+ G PD T +I+ + EAFRI D+ LQ
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI-----HDEMLQ 720
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/547 (26%), Positives = 244/547 (44%), Gaps = 72/547 (13%)
Query: 79 PFDEKEVNYRCSNE------------FWF---------VKVVCTLLLRSSYLSD--TCAR 115
P EV YRC N+ F F + + +L+RS LSD +C
Sbjct: 78 PLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLL 137
Query: 116 YLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV 175
+ + S ++ LE++ LD+ FS N N S ++L++R+ +
Sbjct: 138 RMIRR-SGVSRLEIVNSLDST--------FS--NCGSNDS--VFDLLIRTYVQARKLREA 184
Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
F +RS G + + S +R G + A G+ + V ++ + N ++NA
Sbjct: 185 HEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA 244
Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
L K ++ + PD T+N LI S G +++AFE M G SP
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPG 304
Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL---------- 345
+ TYNT+I+GLC+ + R E+ E+ +S SPD TY S++ CK
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 346 -------------------------GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
G +DKA +N + G+ P V + +LI G+ +
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
G + A +R ML G DVVT+++++ G C+ L + KL +EM + L P+ YT
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
TILI+ CK L +A +++K + YN ++DGF K G++D A I A+M
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
K P ++++IL+ C KG + EA ++++M+ P + NS+I + G ++
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 561 AFRIMQR 567
+++
Sbjct: 604 GESFLEK 610
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 207/436 (47%), Gaps = 3/436 (0%)
Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
+ E SR + +N T N+++ +LC+ G + V ++ G P+ +S+
Sbjct: 223 YQEISRSGVGIN--VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
G + A L++ + + YN+++N L K + A +F E R PD+
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
T+ L+ + G+V + + F DM S PD+V +++++S R + +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
VK ++ PD V YT +I GYC+ G + A + NEM G VT+N ++ G K
Sbjct: 401 VK-EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
+ A+ + M PD T + LIDG+C+ G L ++L +MK K + +V T+
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
L++ K ++ A+ + +++P P Y+ +++ C G++ EA + EM K
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
KP + +I G+C G + S KM+ G PD I+ N+LI ++ ++A
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 562 FRIMQRASEDQNLQLP 577
F ++++ E+Q +P
Sbjct: 640 FGLVKKMEEEQGGLVP 655
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 164/308 (53%), Gaps = 1/308 (0%)
Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
F++LI+ + ++++A E F + S G + I N LI L R+ V + +E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 323 KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN 382
+S +V T +++ CK GKM+K +++ G+ P VT+N LI + G
Sbjct: 227 S-RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 383 MVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
M A + M G+ P V T++++I+G C++G+ + ++ EM LSP+ T+
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
L+ CK+ + + + ++ D+VP ++ ++ F ++GN+D+A + ++E
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
PD V +TILI G+C KG + A+++ N+ML+ GCA D +T N+++ L K M EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 563 RIMQRASE 570
++ +E
Sbjct: 466 KLFNEMTE 473
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 218/434 (50%), Gaps = 11/434 (2%)
Query: 140 LKFLEFSRVNLS---LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF 196
LK +E S +S + T+N+++++LC ++ + M S G +P+
Sbjct: 170 LKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229
Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
+ I G D A + Q + S N +++ K+ ++A+ +E +
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE---MS 286
Query: 257 SQ----PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV 312
+Q PD +TFN L+ GL + G VK A E M G PD+ TYN++ISGLC++ EV
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 313 ARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNV 372
E+L ++ + SP+ VTY ++IS CK ++++AT + + S GI P TFN
Sbjct: 347 KEAVEVLDQM-ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 373 LIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
LI G N A + E M S G PD T++ LID C G+L++ L + +M+
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
+ +V T+ LI+ CK N+ +A +++ + + YN +IDG CK+ V++A
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
++ +M + KPDK T+ L+ C G + +A I M GC PD +T +LIS L
Sbjct: 526 QLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 553 LKGGMPNEAFRIMQ 566
K G A ++++
Sbjct: 586 CKAGRVEVASKLLR 599
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 214/451 (47%), Gaps = 48/451 (10%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYM------RSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
T+ +++ S + L D + V D+M + D H N + + ++ + AK
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK 179
Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
+ +P +STF N L+ AL + + A+ M ++ PD TF ++QG
Sbjct: 180 MSVWGIKPD---VSTF--NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 272 SRIGEVKKAFEFFYDMGSFGCS------------------------------------PD 295
G++ A M FGCS PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
T+NTL++GLC+ V E++ +V + + PDV TY SVISG CKLG++ +A +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIM-DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
++M + P+ VT+N LI K + A + + S G LPDV TF+SLI G C
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
++L +EM+ K P+ +T+ +LI++LC + +L++A LKQ++ + Y
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
N +IDGFCKA EA I EME + VT+ LI G C R+ +A + ++M+
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
G PD T NSL++ +GG +A I+Q
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 207/427 (48%), Gaps = 13/427 (3%)
Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
KT+ VM+ E G D + + M G ++ + V + G+ + A + +
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 217 ------FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
F P + T +N+L+N L K + A+ + + PD +T+N +I G
Sbjct: 285 MSNQDGFFPDQYT-----FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
L ++GEVK+A E M + CSP+ VTYNTLIS LC+ N+V EL + + K P
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG-ILP 398
Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
DV T+ S+I G C A ++ EM S G +P T+N+LID G + A M
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
++M G V+T+++LIDG+C+ + + ++ DEM+ +S N T+ LI+ LCK
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
R+ DA + + Q+ P + YN ++ FC+ G++ +A IV M C+PD VT+
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
LI G C GR+ A + + G N +I L + EA + + E
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 571 DQNLQLP 577
QN P
Sbjct: 639 -QNEAPP 644
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 191/403 (47%), Gaps = 3/403 (0%)
Query: 158 TYNLVMRSLCEMG-LHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
+ N+++ C+ G + D++ + + DG P+ V+ +AG A ++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
+ YNS+++ L K EAV + + P+T T+N LI L + +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
V++A E + S G PD+ T+N+LI GLC EL +E++ K PD TY
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYN 439
Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
+I C GK+D+A + +M G S +T+N LIDGF K AE + + M
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
G + VT+++LIDG C++ ++ +L D+M + P+ YT+ L+ C+ + A
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
++ + N P Y +I G CKAG V+ A+ ++ ++ K + +I G
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Query: 517 HCMKGRMVEAISIFNKMLRIGCA-PDDITVNSLISCLLKGGMP 558
K + EAI++F +ML A PD ++ + L GG P
Sbjct: 620 LFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Query: 365 PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKL 424
P + ++ G+ G+ + + E M S TF LI+ Y + ++ L +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 425 CDEMKGK-NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
D M + L P+ + + ++N L N L ++ + P +N +I C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
+A + A +++ +M PD+ TFT ++ G+ +G + A+ I +M+ GC+ ++
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 544 TVNSLISCLLKGGMPNEAFRIMQRAS 569
+VN ++ K G +A +Q S
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMS 286
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 7/177 (3%)
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
+ P+ + ++ R+G + K+ ++MK TF ILI + + L D
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYA-QFELQD-- 135
Query: 458 RFLKQLKWN----DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
L + W L P YN +++ ++ + A+M KPD TF +L
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195
Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
I C ++ AI + M G PD+ T +++ ++ G + A RI ++ E
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 207/398 (52%), Gaps = 1/398 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++ +C G + M + + S R G DAA L +
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ S YNSL+ L K ++ + K+ P+ TFN+L+ + G++
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
++A E + +M + G SP+I+TYNTL+ G C N ++ + +L ++ +++ SPD+VT+TS
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCSPDIVTFTS 373
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I GYC + ++D ++ ++ G+ +AVT+++L+ GF + G + AE + + M+S G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
LPDV+T+ L+DG C NG+L + L++ ++++ + + +T +I +CK ++ DA
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
L + P Y +I G CK G++ EAN+++ +MEE P+ T+ LI H
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
G + + + +M G + D ++ +I LL G
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 198/395 (50%), Gaps = 1/395 (0%)
Query: 172 HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNS 231
D +F M LP+ F S+ R + + Q + + + N
Sbjct: 69 KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
++N + A + + +L +PDT TFN LI+GL G+V +A M G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
C PD+VTYN++++G+CR + + +LL++++ + DV TY+++I C+ G +D A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKME-ERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
++ EM + GIK S VT+N L+ G K G + + M+S +P+V+TF+ L+D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
+ + G+L + +L EM + +SPN+ T+ L++ C +NRL++A L + N P
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
+ +I G+C VD+ + + ++ + VT++IL+ G C G++ A +F
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
+M+ G PD +T L+ L G +A I +
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 218/444 (49%), Gaps = 2/444 (0%)
Query: 130 IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP 189
I R L L F + +N + H+ T N+++ C V + G+ P
Sbjct: 98 IARTKQFNLVLDFCKQLELN-GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 190 NSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
++ + GK A L+ + YNS++N + + + A+ +
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
++ + D +T++ +I L R G + A F +M + G +VTYN+L+ GLC+
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
+ G LLK++ E P+V+T+ ++ + K GK+ +A +Y EM + GI P+ +T
Sbjct: 277 GKWNDGALLLKDM-VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
+N L+DG+ + A M + M+ PD+VTF+SLI GYC +++ G+K+ +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
+ L N T++IL+ C+ ++ A +++ + ++P Y ++DG C G ++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
+A I ++++ + V +T +I G C G++ +A ++F + G P+ +T +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 550 SCLLKGGMPNEAFRIMQRASEDQN 573
S L K G +EA ++++ ED N
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGN 539
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 204/410 (49%), Gaps = 1/410 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+N +++ L G V+ D M +G P+ V+ R+G A LL +
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
V F Y++++++L + D A+ +FKE + T+N L++GL + G+
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
DM S P+++T+N L+ + ++ +EL KE+ + SP+++TY +
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNT 338
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
++ GYC ++ +A + + M P VTF LI G+ V + + + G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
+ + VT+S L+ G+C++G++ +L EM + P+V T+ IL++ LC +L A
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+ L+ + + MY +I+G CK G V++A + + K KP+ +T+T++I G
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
C KG + EA + KM G AP+D T N+LI L+ G + ++++
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 79/152 (51%)
Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
+ + L EM P++ F+ +A+ + + N F KQL+ N + + N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
I+ FC+ A ++ ++ + +PD TF LI G ++G++ EA+ + ++M+ GC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
PD +T NS+++ + + G + A ++++ E
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/444 (30%), Positives = 212/444 (47%), Gaps = 37/444 (8%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
YN ++ SL GL D ++ V+ M D PN V+ + G + A +S+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE------------YFRLYSQ-------- 258
+ F Y SL+ ++ + D A +F E Y L
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 259 ---------------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
P T+ +LI+ L +A +M G P+I TY LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
LC + + ELL ++ + P+V+TY ++I+GYCK G ++ A + M S +
Sbjct: 366 DSLCSQCKFEKARELLGQM-LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
P+ T+N LI G+ K N+ A + +ML LPDVVT++SLIDG CR+G + +
Sbjct: 425 SPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 424 LCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC 483
L M + L P+ +T+T +I++LCK R+ +A L+ + P MY +IDG+C
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
KAG VDEA++++ +M K C P+ +TF LI G C G++ EA + KM++IG P
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 544 TVNSLISCLLKGGMPNEAFRIMQR 567
T LI LLK G + A+ Q+
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQ 627
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 194/400 (48%), Gaps = 2/400 (0%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
+ +TY ++++SLC + M G PN + S K + A+ LL
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
Q + + YN+L+N K+ ++AV + + P+T T+N LI+G +
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK- 440
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
V KA M PD+VTYN+LI G CR + LL + + PD T
Sbjct: 441 SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG-LVPDQWT 499
Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
YTS+I CK ++++A +++ + G+ P+ V + LIDG+ K G + A M E+ML
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
S LP+ +TF++LI G C +G+L + L ++M L P V T TILI+ L K+ +
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
A +Q+ + P Y I +C+ G + +A ++A+M E PD T++ LI
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
G+ G+ A + +M GC P T SLI LL+
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 207/455 (45%), Gaps = 37/455 (8%)
Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
V L+ F TY ++ C+ DS VF+ M G N + A +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
D A L + + E + Y L+ +L EA+ + KE +P+ T+ +L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
I L + +KA E M G P+++TYN LI+G C+ + +++ E+ +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV-ELMESRK 423
Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
SP+ TY +I GYCK + KA G+ N+M + P VT+N LIDG + GN SA
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
+ M G +PD T++S+ID C++ ++ + L D ++ K ++PNV +T LI+
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI------------- 494
CK ++++A L+++ + +P +N +I G C G + EA ++
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 495 ----------------------VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
+M KPD T+T I +C +GR+++A + K
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
M G +PD T +SLI G N AF +++R
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 199/465 (42%), Gaps = 56/465 (12%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
+ TY +++ SLC + + + M G +PN ++ + G + A ++
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
+++ +T YN L+ K +N +A+ + + PD T+N LI G R
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
G A+ M G PD TY ++I LC+ V +L ++ K +P+VV
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG-VNPNVVM 534
Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
YT++I GYCK GK+D+A + +M S P+++TFN LI G G + A + E+M+
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
G P V T + LI ++G + +M P+ +T+T I C+E RL
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT----- 509
DA + +++ N + P F Y+ +I G+ G + A ++ M + C+P + T
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 510 ------------------------------------------------FTILIIGHCMKG 521
+ LI+G C G
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Query: 522 RMVEAISIFNKMLR-IGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
+ A +F+ M R G +P ++ N+L+SC K NEA +++
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 186/390 (47%), Gaps = 48/390 (12%)
Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
S + Y SLL L+ NN V +FK + D+ + + L R + FE
Sbjct: 122 SVYSYASLLTLLI--NNGYVGV-VFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELK 178
Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
Y + GC YNTL++ L R V ++ E+ + + P++ TY +++GYCK
Sbjct: 179 YKL-IIGC------YNTLLNSLARFGLVDEMKQVYMEM-LEDKVCPNIYTYNKMVNGYCK 230
Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG---------KVGNMVSAEYMRERMLS 395
LG +++A +++ G+ P T+ LI G+ KV N + + R ++
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 396 FGYL--------------------------PDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
+ +L P V T++ LI C + + ++ L L EM+
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
+ PN++T+T+LI++LC + + AR L Q+ L+P YN +I+G+CK G ++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
+A +V ME ++ P+ T+ LI G+C K + +A+ + NKML PD +T NSLI
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 550 SCLLKGGMPNEAFRIMQRASEDQNLQLPSW 579
+ G + A+R++ + D+ L W
Sbjct: 470 DGQCRSGNFDSAYRLLSLMN-DRGLVPDQW 498
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 192/414 (46%), Gaps = 22/414 (5%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TY ++ SLC+ + +FD + G PN M + +AGK D A +L +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
++ +N+L++ L EA + ++ ++ QP T ILI L + G+
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
A+ F M S G PD TY T I CR + +++ +++ ++ SPD+ TY+S
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR-ENGVSPDLFTYSS 677
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I GY LG+ + A + M G +PS TF LI +++ +Y +++ G
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK------HLLEMKYGKQK----G 727
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
P++ S+++ + + ++L ++M +++PN ++ LI +C+ L A
Sbjct: 728 SEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 458 RFLKQLKWND-LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
+ ++ N+ + P ++N ++ CK +EA +V +M P + +LI G
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQR 567
KG S+F +L+ G D++ +I + K G+ E F +M++
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 131/323 (40%), Gaps = 18/323 (5%)
Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
LE V + L + T +++ L + G D F M S G P++ F+ +
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
R G+ A+ ++++ R V+ F Y+SL+ + A + K +P
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 262 WTFNILIQGL------------------SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
TF LI+ L S + E E M +P+ +Y LI
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGI 363
G+C V + ++ ++ SP + + +++S CKL K ++A + ++M G
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 364 KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLK 423
P + VLI G K G + + +L GY D + + +IDG + G + +
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Query: 424 LCDEMKGKNLSPNVYTFTILINA 446
L + M+ + T+++LI
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 212/416 (50%), Gaps = 6/416 (1%)
Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
+T+N V+ LC+ + + + M G P+ + ++ + G+ DAAK L +
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIG 275
E+ + +N+L++ V D+A + + Y PD T+N LI G + G
Sbjct: 348 IPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
V A E +DM + GC P++ +Y L+ G C++ ++ + +L E+ P+ V +
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS-ADGLKPNTVGF 462
Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
+IS +CK ++ +A I+ EM G KP TFN LI G +V + A ++ M+S
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
G + + VT+++LI+ + R G++ + KL +EM + + T+ LI LC+ ++
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
AR +++ + P N +I+G C++G V+EA EM + PD VTF LI
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
G C GR+ + +++F K+ G PD +T N+L+S L KGG +A ++ ED
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 203/404 (50%), Gaps = 4/404 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+ +VM++ C + DS + M G +PNS + + + S + + + A LL +
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+N ++ L K + +EA M PD T+ L+ GL +IG V
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
A + FY + P+IV +NTLI G + +L ++ PDV TY S
Sbjct: 339 DAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I GY K G + A + ++M + G KP+ ++ +L+DGF K+G + A + M + G
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
P+ V F+ LI +C+ ++ + +++ EM K P+VYTF LI+ LC+ + + A
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
L+ + +V YN +I+ F + G + EA +V EM + D++T+ LI G
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
C G + +A S+F KMLR G AP +I+ N LI+ L + GM EA
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 221/483 (45%), Gaps = 40/483 (8%)
Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
K++P ++++ N ++ ++ HSF Y +++ L G ++ +
Sbjct: 74 HKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRL 133
Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM-YNSLLNALV 237
M+ +G + + + +AG L+ + R TF YN +L LV
Sbjct: 134 LIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILV 193
Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
N A +F + P +TF ++++ + E+ A DM GC P+ V
Sbjct: 194 SGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSV 253
Query: 298 TYNTLISGLCRVNEVARGHELLKEV--------------------KFK------------ 325
Y TLI L + N V +LL+E+ KF
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 326 --SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
F+PD +TY +++G CK+G++D A ++ + KP V FN LI GF G +
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRL 369
Query: 384 VSAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
A+ + M+ S+G +PDV T++SLI GY + G + L++ +M+ K PNVY++TI
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
L++ CK ++++A L ++ + L P +N +I FCK + EA I EM K
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
CKPD TF LI G C + A+ + M+ G + +T N+LI+ L+ G EA
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 563 RIM 565
+++
Sbjct: 550 KLV 552
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 204/408 (50%), Gaps = 14/408 (3%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
TY +M LC++G D+ + +F +P ++ F + + G+ D AK +LS
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLF------YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLS 377
Query: 216 QFRPG-EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
+ YNSL+ K+ A+ + + +P+ +++ IL+ G ++
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
G++ +A+ +M + G P+ V +N LIS C+ + + E+ +E+ K PDV T
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG-CKPDVYT 496
Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
+ S+ISG C++ ++ A + +M S G+ + VT+N LI+ F + G + A + M+
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
G D +T++SLI G CR G++++ L ++M +P+ + ILIN LC+ +
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
+A F K++ P +N +I+G C+AG +++ + +++ + PD VTF L+
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
C G + +A + ++ + G P+ T S LL+ +P E
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRT----WSILLQSIIPQETL 720
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 158/338 (46%), Gaps = 39/338 (11%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++ + GL V MR+ G PN V + GK D A +L++
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ +T +N L++A K++ EAV +F+E R +PD +TFN LI GL + E+
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP-DVVTYT 336
K A DM S G + VTYNTLI+ R E+ +L+ E+ F+ SP D +TY
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG--SPLDEITYN 568
Query: 337 SVISGYCKLGKMDKATGIYNEM---------NSCGI------------------------ 363
S+I G C+ G++DKA ++ +M SC I
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 364 --KPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
P VTFN LI+G + G + M ++ + G PD VTF++L+ C+ G +
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRF 459
L DE PN T++IL+ ++ + L D RRF
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQETL-DRRRF 725
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 18/289 (6%)
Query: 290 FGCSPDIVTYNT----LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
+ C P +YN L+SG C +++L + P + T+ V+ +C +
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR-----KIPPTLFTFGVVMKAFCAV 230
Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
++D A + +M G P++V + LI K + A + E M G +PD TF
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
+ +I G C+ ++N+ K+ + M + +P+ T+ L+N LCK R++ A+ +
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR--- 347
Query: 466 NDLVPKP--FMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCKPDKVTFTILIIGHCMKGR 522
+PKP ++N +I GF G +D+A ++++M PD T+ LI G+ +G
Sbjct: 348 ---IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
+ A+ + + M GC P+ + L+ K G +EA+ ++ S D
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 203/348 (58%), Gaps = 5/348 (1%)
Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
L+ AL+K+N + + Y++KE R QP+ +TFN++I L + G++ KA + DM +G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 292 CSPDIVTYNTLISGLCRV---NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
CSP++V+YNTLI G C++ ++ + +LKE+ +++ SP++ T+ +I G+ K +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM-VENDVSPNLTTFNILIDGFWKDDNL 312
Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
+ ++ EM +KP+ +++N LI+G G + A MR++M+S G P+++T+++L
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
I+G+C+N L + L + +KG+ P + +LI+A CK +++D ++++ +
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
VP YN +I G C+ GN++ A + ++ K PD VTF IL+ G+C KG +A
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM 491
Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQL 576
+ +M ++G P +T N ++ K G A + + +++ L++
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM 539
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 185/360 (51%), Gaps = 6/360 (1%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAG---KCDAAKGLL 214
T+N+V+ +LC+ G + + V + M+ G PN + + G K A +L
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
+ +V+ + +N L++ K +N ++ +FKE +P+ ++N LI GL
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
G++ +A M S G P+++TYN LI+G C+ + + ++ VK + P
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV-PTTRM 403
Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
Y +I YCKLGK+D + EM GI P T+N LI G + GN+ +A+ + +++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
S G LPD+VTF L++GYCR G+ + L EM L P T+ I++ CKE L
Sbjct: 464 SKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 455 DARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
A Q+ K L YN ++ G+ + G +++AN+++ EM EK P+++T+ I+
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 3/204 (1%)
Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
G K SA++ L+ K EY+ + M+ P+V TF+ +I+ C+ G++N+
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCK---ENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
+ ++MK SPNV ++ LI+ CK ++ A LK++ ND+ P +N +
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
IDGF K N+ + + EM ++ KP+ +++ LI G C G++ EAIS+ +KM+ G
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 539 APDDITVNSLISCLLKGGMPNEAF 562
P+ IT N+LI+ K M EA
Sbjct: 363 QPNLITYNALINGFCKNDMLKEAL 386
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 21/247 (8%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++ C+ + +F ++ G +P + M + + + GK D L +
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQ--PDTWTFNILIQGLSRIG 275
+ YN L+ L + N + A +F + L S+ PD TF+IL++G R G
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ---LTSKGLPDLVTFHILMEGYCRKG 484
Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
E +KA +M G P +TYN ++ G C+ + + +++ + +V +Y
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
++ GY + GK++ A + NEM G+ P+ +T+ E ++E M+
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY----------------EIVKEEMVD 588
Query: 396 FGYLPDV 402
G++PD+
Sbjct: 589 QGFVPDI 595
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 193/360 (53%), Gaps = 3/360 (0%)
Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
++ +++N L+N K+ N +A +F E + QP +FN LI G ++G + + F
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
+ M PD+ TY+ LI+ LC+ N++ H L E+ K P+ V +T++I G+
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM-CKRGLIPNDVIFTTLIHGHS 356
Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
+ G++D Y +M S G++P V +N L++GF K G++V+A + + M+ G PD +
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
T+++LIDG+CR G + L++ EM + + F+ L+ +CKE R+ DA R L+++
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
+ P Y ++D FCK G+ ++ EM+ P VT+ +L+ G C G+M
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKKAV 583
A + + ML IG PDDIT N+L+ + N + R +Q+ L S+K V
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA--NSSKRYIQKPEIGIVADLASYKSIV 594
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 161/330 (48%), Gaps = 1/330 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
+N++M C+ G Q VFD + P ++ + G D L Q
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
F Y++L+NAL K+N D A +F E + P+ F LI G SR GE+
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
E + M S G PDIV YNTL++G C+ ++ ++ + + PD +TYT+
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-IRRGLRPDKITYTT 420
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I G+C+ G ++ A I EM+ GI+ V F+ L+ G K G ++ AE ML G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
PD VT++ ++D +C+ G G KL EM+ P+V T+ +L+N LCK ++ +A
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGN 487
L + +VP YN +++G + N
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 190/389 (48%), Gaps = 18/389 (4%)
Query: 193 MIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY 252
+IE VS R GK A+ +S M F+ ++L+ +A+ +
Sbjct: 140 LIELVVS---RKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAI----QC 192
Query: 253 FRLYSQPDTWTFNILIQG-------LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG 305
FRL + F++ I+G + ++ + F+ ++ G ++ +N L++
Sbjct: 193 FRLSRK---HRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNK 249
Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
C+ ++ ++ E+ K P VV++ ++I+GYCK+G +D+ + ++M +P
Sbjct: 250 FCKEGNISDAQKVFDEIT-KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRP 308
Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
T++ LI+ K M A + + M G +P+ V F++LI G+ RNG+++ +
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
+M K L P++ + L+N CK L AR + + L P Y +IDGFC+
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
G+V+ A I EM++ + D+V F+ L+ G C +GR+++A +MLR G PDD+T
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 546 NSLISCLLKGGMPNEAFRIMQRASEDQNL 574
++ K G F++++ D ++
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 163/318 (51%), Gaps = 7/318 (2%)
Query: 203 RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTW 262
+ G A+ + + + + +N+L+N K N DE + + + ++PD +
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311
Query: 263 TFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEV 322
T++ LI L + ++ A F +M G P+ V + TLI G R E+ +L+KE
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI----DLMKES 367
Query: 323 KFK---SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
K PD+V Y ++++G+CK G + A I + M G++P +T+ LIDGF +
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
G++ +A +R+ M G D V FS+L+ G C+ G++ + EM + P+ T
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
+T++++A CK+ + LK+++ + VP YN +++G CK G + A++++ M
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Query: 500 EKRCKPDKVTFTILIIGH 517
PD +T+ L+ GH
Sbjct: 548 NIGVVPDDITYNTLLEGH 565
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 38/157 (24%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TY ++M + C+ G + + M+SDGH+P
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP---------------------------- 518
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
S YN LLN L K A + + PD T+N L++G R
Sbjct: 519 -------SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
K + G D+ +Y ++++ L R ++ R
Sbjct: 572 SKR---YIQKPEIGIVADLASYKSIVNELDRASKDHR 605
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 200/373 (53%), Gaps = 3/373 (0%)
Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
++ K A G+L+ + + +N LL L + +AV + +E R PD
Sbjct: 118 VQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDV 177
Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
+++N +I+G E++KA E +M GCS +VT+ LI C+ ++ LKE
Sbjct: 178 FSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKE 237
Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
+KF D+V YTS+I G+C G++D+ +++E+ G P A+T+N LI GF K+G
Sbjct: 238 MKFMG-LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
+ A + E M+ G P+V T++ LIDG C G+ + L+L + M K+ PN T+
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM--E 499
I+IN LCK+ + DA ++ +K P YN ++ G C G++DEA+ ++ M +
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
PD +++ LI G C + R+ +A+ I++ ++ A D +T N L++ LK G N
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 560 EAFRIMQRASEDQ 572
+A + ++ S+ +
Sbjct: 477 KAMELWKQISDSK 489
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 203/447 (45%), Gaps = 38/447 (8%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
+YN V+R CE + + + M+ G + + + +AGK D A G L +
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ + +Y SL+ D +F E P T+N LI+G ++G++
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
K+A E F M G P++ TY LI GLC V + +LL + K E P+ VTY
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE-EPNAVTYNI 357
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML--S 395
+I+ CK G + A I M +P +T+N+L+ G G++ A + ML S
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-----KGKNLSPNVY------------ 438
PDV+++++LI G C+ +L+Q L + D + G ++ N+
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 439 ------------------TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
T+T +I+ CK LN A+ L +++ ++L P F YN ++
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
CK G++D+A + EM+ PD V+F I+I G G + A S+ M R G +P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 541 DDITVNSLISCLLKGGMPNEAFRIMQR 567
D T + LI+ LK G +EA +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDK 624
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 201/419 (47%), Gaps = 1/419 (0%)
Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
+ L Y ++R C+ G D + +FD + G P + + + G+
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300
Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
A + V + + Y L++ L EA+ + +P+ T+NI+I
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360
Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
L + G V A E M PD +TYN L+ GLC ++ +LL + S ++
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 330 -PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
PDV++Y ++I G CK ++ +A IY+ + VT N+L++ K G++ A
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
+ +++ + + T++++IDG+C+ G LN L +M+ L P+V+ + L+++LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
KE L+ A R ++++ ++ P +N +IDG KAG++ A ++ M PD
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
T++ LI G + EAIS F+KM+ G PD +S++ + G ++ ++++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 179/356 (50%), Gaps = 9/356 (2%)
Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL----SRIGEVKKAF 281
F N+L+ LV+ N + A ++R + DT+ + + GL ++ + AF
Sbjct: 72 AFAGNNLMAKLVRSRNHELAF----SFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAF 127
Query: 282 EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISG 341
M G + ++ +N L+ GLCR E + LL+E++ ++ PDV +Y +VI G
Sbjct: 128 GVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR-RNSLMPDVFSYNTVIRG 186
Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
+C+ +++KA + NEM G S VT+ +LID F K G M A + M G D
Sbjct: 187 FCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEAD 246
Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
+V ++SLI G+C G+L++G L DE+ + SP T+ LI CK +L +A +
Sbjct: 247 LVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306
Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
+ + P + Y +IDG C G EA ++ M EK +P+ VT+ I+I C G
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
+ +A+ I M + PD+IT N L+ L G +EA +++ +D + P
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 178/394 (45%), Gaps = 39/394 (9%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++R C++G +F++M G PN + GK A LL+
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ + YN ++N L K +AV + + + ++PD T+NIL+ GL G++
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 278 KKAFEFFYDM--GSFGCSPDIVTYNTLISGLCRVN------------------------- 310
+A + Y M S PD+++YN LI GLC+ N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 311 ----------EVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
+V + EL K++ S+ + TYT++I G+CK G ++ A G+ +M
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQIS-DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
++PS +N L+ K G++ A + E M PDVV+F+ +IDG + G +
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
L M LSP+++T++ LIN K L++A F ++ + P + + V+
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDK-VTFTIL 513
G D+ +V ++ +K DK +T T++
Sbjct: 643 YCISQGETDKLTELVKKLVDKDIVLDKELTCTVM 676
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 164/352 (46%), Gaps = 14/352 (3%)
Query: 158 TYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL-- 214
TYN+++ LC+ GL D+V++V + M+ P++ + G D A LL
Sbjct: 354 TYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 215 ----SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
S + +V YN+L++ L K+N +A+ ++ D T NIL+
Sbjct: 413 MLKDSSYTDPDV----ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
+ G+V KA E + + + TY +I G C+ + LL +++ SE P
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV-SELQP 527
Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
V Y ++S CK G +D+A ++ EM P V+FN++IDG K G++ SAE +
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
M G PD+ T+S LI+ + + G L++ + D+M P+ + ++ +
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFC-KAGNVDEANVIVAEMEEK 501
+ +K+L D+V + V+D C + N+D A ++ ++K
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDDK 699
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 205/406 (50%), Gaps = 1/406 (0%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
YN ++ C+M D V D MRS P++ + S GK D A +L+Q
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
+ Y L+ A + + DEA+ + E +PD +T+N +I+G+ + G V
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
+AFE ++ GC PD+++YN L+ L + G +L+ ++ F + P+VVTY+ +
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM-FSEKCDPNVVTYSIL 339
Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
I+ C+ GK+++A + M G+ P A +++ LI F + G + A E M+S G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
LPD+V +++++ C+NG+ +Q L++ ++ SPN ++ + +AL A
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
+ ++ N + P YN +I C+ G VDEA ++ +M P VT+ I+++G C
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
R+ +AI++ M+ GC P++ T LI + G EA +
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 173/339 (51%), Gaps = 1/339 (0%)
Query: 227 FMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYD 286
F YN+L+N K N D+A + PDT T+NI+I L G++ A +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
+ S C P ++TY LI V +L+ E+ PD+ TY ++I G CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNTIIRGMCKEG 277
Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
+D+A + + G +P +++N+L+ G E + +M S P+VVT+S
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
LI CR+G++ + + L MK K L+P+ Y++ LI A C+E RL+ A FL+ + +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
+P YN V+ CK G D+A I ++ E C P+ ++ + G + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
+ + +M+ G PD+IT NS+ISCL + GM +EAF ++
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 43/336 (12%)
Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG---LCRVNEVARGHELLKEVKFKSEFS 329
R G ++ M G +PD++ LI G L + + R E+L+ KF
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE--KFGQ--- 155
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
PDV Y ++I+G+CK+ ++D AT + + M S P VT+N++I G + A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
++LS P V+T++ LI+ G +++ LKL DEM + L P+++T+ +I +CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 450 ENRLNDA-----------------------RRFLKQLKWND---LVPKPF---------M 474
E ++ A R L Q KW + L+ K F
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
Y+ +I C+ G ++EA ++ M+EK PD ++ LI C +GR+ AI M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
GC PD + N++++ L K G ++A I + E
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 1/225 (0%)
Query: 343 CKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDV 402
C+ G ++ + M G P + LI GF + N+ A + E + FG PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158
Query: 403 VTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQ 462
+++LI+G+C+ +++ ++ D M+ K+ SP+ T+ I+I +LC +L+ A + L Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 463 LKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGR 522
L ++ P Y +I+ G VDEA ++ EM + KPD T+ +I G C +G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 523 MVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
+ A + + GC PD I+ N L+ LL G E ++M +
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 219/428 (51%), Gaps = 14/428 (3%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
S +N ++ ++ +M + V + + M++ G + F++ R + A +L
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
++ + P VT+S SLLN +AV + + + +PDT+TF LI
Sbjct: 142 AKMMKLGYEPDIVTLS-----SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
GL + +A M GC PD+VTY T+++GLC+ ++ LLK+++ K +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME-KGKIE 255
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
DVV Y ++I G CK MD A ++ EM++ GI+P T++ LI G A +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
M+ P+VVTFS+LID + + G+L + KL DEM +++ P+++T++ LIN C
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
+RL++A+ + + D P Y+ +I GFCKA V+E + EM ++ + VT
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQ 566
+T LI G A +F +M+ +G P+ +T N L+ L K G +A F +Q
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 567 RASEDQNL 574
R++ + ++
Sbjct: 496 RSTMEPDI 503
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 200/416 (48%), Gaps = 1/416 (0%)
Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
L ++H TY++ + C V M G+ P+ + ++ + +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
A L+ Q TF + +L++ L N A EAV + + + QPD T+ ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
GL + G++ A M D+V YNT+I GLC+ + L E+ K
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG-I 289
Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
PDV TY+S+IS C G+ A+ + ++M I P+ VTF+ LID F K G +V AE
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
+ + M+ PD+ T+SSLI+G+C + +L++ + + M K+ PNV T++ LI C
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
K R+ + +++ LV Y +I GF +A + D A ++ +M P+ +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
T+ IL+ G C G++ +A+ +F + R PD T N +I + K G + + +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 203/423 (47%), Gaps = 37/423 (8%)
Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
+ D M G P+ V+ + G D A LL + G++ +YN++++ L
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
K + D+A+ +F E +PD +T++ LI L G A DM +P++V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
T++ LI + ++ +L E+ K PD+ TY+S+I+G+C ++D+A ++
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 358 MNSCGIKPSAVTFNVLIDGF-------------------GKVGNMVS------------- 385
M S P+ VT++ LI GF G VGN V+
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 386 ---AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTI 442
A+ + ++M+S G P+++T++ L+DG C+NG+L + + + + ++ + P++YT+ I
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 443 LINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR 502
+I +CK ++ D L + P YN +I GFC+ G+ +EA+ ++ +M+E
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 503 CKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
P+ T+ LI G + + +M G A D T+ L++ +L G +++F
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKSF 627
Query: 563 RIM 565
M
Sbjct: 628 LDM 630
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 178/365 (48%), Gaps = 1/365 (0%)
Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
K D A L S +N LL+A+ K N + + + ++ L D +T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
I I R ++ A M G PDIVT ++L++G C ++ L+ ++ +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM-VE 181
Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
+ PD T+T++I G K +A + ++M G +P VT+ +++G K G++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
A + ++M DVV ++++IDG C+ ++ L L EM K + P+V+T++ LI+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
LC R +DA R L + + P ++ +ID F K G + EA + EM ++ P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
D T++ LI G CM R+ EA +F M+ C P+ +T ++LI K E +
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 566 QRASE 570
+ S+
Sbjct: 422 REMSQ 426
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 167/319 (52%), Gaps = 1/319 (0%)
Query: 232 LLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
L N L D+AV +F + + P FN L+ ++++ + + M + G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKA 351
S D+ TY+ I+ CR ++++ +L ++ K + PD+VT +S+++GYC ++ A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
+ ++M G KP TF LI G A + ++M+ G PD+VT+ ++++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
C+ G ++ L L +M+ + +V + +I+ LCK ++DA ++ + P
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
F Y+ +I C G +A+ ++++M E++ P+ VTF+ LI +G++VEA +++
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 532 KMLRIGCAPDDITVNSLIS 550
+M++ PD T +SLI+
Sbjct: 353 EMIKRSIDPDIFTYSSLIN 371
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 4/274 (1%)
Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
+ S++ TY+ ++ C D + +F+ M S PN + +A +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
+ L + + +T Y +L++ + + D A +FK+ + P+ T+NIL
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
+ GL + G++ KA F + PDI TYN +I G+C+ +V G EL + K
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG- 533
Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM-VSA 386
SP+V+ Y ++ISG+C+ G ++A + +M G P++ T+N LI + G+ SA
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
E ++E M S G+ D T L+ +G+L++
Sbjct: 594 ELIKE-MRSCGFAGDASTI-GLVTNMLHDGRLDK 625
Score = 39.3 bits (90), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 52/109 (47%)
Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
IL N L +++DA + + P +N ++ K + + +M+
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
D T++I I C + ++ A+++ KM+++G PD +T++SL++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 199/416 (47%), Gaps = 1/416 (0%)
Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
NL ++H+ TY++++ C V M G+ P+ + ++ +
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
A L+ Q +F +N+L++ L + N A EAV + QPD T+ I++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
GL + G++ A M P +V YNT+I LC V L E+ K
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG-I 287
Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
P+VVTY S+I C G+ A+ + ++M I P+ VTF+ LID F K G +V AE
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
+ + M+ PD+ T+SSLI+G+C + +L++ + + M K+ PNV T+ LI C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
K R+++ +++ LV Y +I GF +A D A ++ +M PD +
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
T++IL+ G C G++ A+ +F + R PD T N +I + K G + + +
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 215/428 (50%), Gaps = 14/428 (3%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
S ++ ++ ++ +M D V + + M++ G N ++ R + A +L
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
++ + P VT+ NSLLN N +AV + + + QPD++TFN LI
Sbjct: 140 AKMMKLGYEPDIVTL-----NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
GL R +A M GC PD+VTY +++GLC+ ++ LLK+++ + +
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME-QGKIE 253
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
P VV Y ++I C ++ A ++ EM++ GI+P+ VT+N LI G A +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
M+ P+VVTFS+LID + + G+L + KL DEM +++ P+++T++ LIN C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
+RL++A+ + + D P YN +I GFCKA VDE + EM ++ + VT
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQ 566
+T LI G A +F +M+ G PD +T + L+ L G A F +Q
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 567 RASEDQNL 574
R+ + ++
Sbjct: 494 RSKMEPDI 501
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 207/443 (46%), Gaps = 37/443 (8%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+N ++ L + D M G P+ V+ + G D A LL +
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY------------------------- 252
G++ +YN++++AL N ++A+ +F E
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 253 ---FRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
RL S P+ TF+ LI + G++ +A + + +M PDI TY++L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
I+G C + + + E+ + P+VVTY ++I G+CK ++D+ ++ EM+ G
Sbjct: 368 INGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
+ + VT+ LI GF + +A+ + ++M+S G LPD++T+S L+DG C NG++ L
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
+ + ++ + P++YT+ I+I +CK ++ D L + P Y ++ GF
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
C+ G +EA+ + EM+E+ PD T+ LI H G + + +M D
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 606
Query: 543 ITVNSLISCLLKGGMPNEAFRIM 565
T+ L++ +L G +++F M
Sbjct: 607 STI-GLVTNMLHDGRLDKSFLKM 628
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 131/246 (53%)
Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
KS P +V ++ ++S K+ K D + +M + GI + T+++LI+ F + +
Sbjct: 74 KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133
Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
A + +M+ GY PD+VT +SL++G+C +++ + L +M P+ +TF LI
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
+ L + NR ++A + ++ P Y V++G CK G++D A ++ +ME+ + +
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
P V + +I C + +A+++F +M G P+ +T NSLI CL G ++A R+
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 565 MQRASE 570
+ E
Sbjct: 314 LSDMIE 319
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 4/271 (1%)
Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
S++ TY+ ++ C D + +F+ M S PN + +A + D
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
L + + +T Y +L++ + D A +FK+ PD T++IL+ G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
L G+V+ A F + PDI TYN +I G+C+ +V G +L + K P
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKP 534
Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGN-MVSAEYM 389
+VVTYT+++SG+C+ G ++A ++ EM G P + T+N LI + G+ SAE +
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
RE M S ++ D T L+ +G+L++
Sbjct: 595 RE-MRSCRFVGDASTI-GLVTNMLHDGRLDK 623
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%)
Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
K+D A ++ +M PS V F+ L+ K+ + E+M + G ++ T+S
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
LI+ +CR QL+ L + +M P++ T L+N C NR++DA + Q+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
P F +N +I G + EA +V M K C+PD VT+ I++ G C +G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
+S+ KM + P + N++I L N+A +
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 451 NRLNDARRFLKQLKWNDLV-PKPF----MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
NRLND + + D+V +PF ++ ++ K D + +M+
Sbjct: 55 NRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH 114
Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
+ T++ILI C + ++ A+++ KM+++G PD +T+NSL++ G ++A ++
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 566 QRASE 570
+ E
Sbjct: 175 GQMVE 179
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 185/350 (52%), Gaps = 6/350 (1%)
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
+ P VT+S SLLN EAV + + F + QP+T TFN LI GL +
Sbjct: 146 YEPDIVTLS-----SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
+A M + GC PD+ TY T+++GLC+ ++ LLK+++ K + DVV YT
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADVVIYT 259
Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
++I C ++ A ++ EM++ GI+P+ VT+N LI G A + M+
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
P+VVTFS+LID + + G+L + KL DEM +++ P+++T++ LIN C +RL++A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
+ + + D P YN +I GFCKA V+E + EM ++ + VT+ LI G
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
G A IF KM+ G PD IT + L+ L K G +A + +
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 1/408 (0%)
Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
NL +++ +YN+++ C V M G+ P+ + ++ +
Sbjct: 108 NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 167
Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
A L+ Q E +T +N+L++ L N A EAV + QPD +T+ ++
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
GL + G++ A M D+V Y T+I LC V L E+ K
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG-I 286
Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
P+VVTY S+I C G+ A+ + ++M I P+ VTF+ LID F K G +V AE
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
+ + M+ PD+ T+SSLI+G+C + +L++ + + M K+ PNV T+ LI C
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
K R+ + +++ LV YN +I G +AG+ D A I +M PD +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
T++IL+ G C G++ +A+ +F + + PD T N +I + K G
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 208/446 (46%), Gaps = 42/446 (9%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+N ++ L + D M + G P+ V+ + G D A LL +
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEY------------------------- 252
G++ +Y ++++AL N ++A+ +F E
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 253 ---FRLYSQ-------PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
RL S P+ TF+ LI + G++ +A + + +M PDI TY++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 303 ISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
I+G C R++E EL+ + P+VVTY ++I G+CK ++++ ++ EM+
Sbjct: 367 INGFCMHDRLDEAKHMFELM----ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
G+ + VT+N LI G + G+ A+ + ++M+S G PD++T+S L+DG C+ G+L
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
+ L + + ++ + P++YT+ I+I +CK ++ D L + P +Y +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
GFC+ G +EA+ + EM+E P+ T+ LI G + + +M G
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 540 PDDITVNSLISCLLKGGMPNEAFRIM 565
D T++ +I+ L G + ++
Sbjct: 603 GDASTISMVINMLHDGRLEKSYLEML 628
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 174/365 (47%), Gaps = 1/365 (0%)
Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
K D A L + S +N LL+A+ K N D + + + L D +++N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
ILI R ++ A M G PDIVT ++L++G C ++ L+ ++ F
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM-FV 178
Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
E+ P+ VT+ ++I G K +A + + M + G +P T+ +++G K G++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
A + ++M DVV ++++ID C +N L L EM K + PNV T+ LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
LC R +DA R L + + P ++ +ID F K G + EA + EM ++ P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
D T++ LI G CM R+ EA +F M+ C P+ +T N+LI K E +
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 566 QRASE 570
+ S+
Sbjct: 419 REMSQ 423
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 129/260 (49%), Gaps = 1/260 (0%)
Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
S++ TY+ ++ C D + +F+ M S PN + +A + +
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
L + + +T YN+L+ L + + D A +FK+ PD T++IL+ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
L + G+++KA F + PDI TYN +I G+C+ +V G +L + K P
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKP 533
Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
+V+ YT++ISG+C+ G ++A ++ EM G P++ T+N LI + G+ ++ +
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
Query: 391 ERMLSFGYLPDVVTFSSLID 410
+ M S G++ D T S +I+
Sbjct: 594 KEMRSCGFVGDASTISMVIN 613
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 233/471 (49%), Gaps = 32/471 (6%)
Query: 119 EKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
+ +S L+ ++ + P GL+F ++ N +H +++ L++ L G ++ V
Sbjct: 64 QTISRTTVLQTLRLIKVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFL---GRARNLNVA 119
Query: 179 FDYMRSDGHLPNS--PMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
+++ S N + + + +S IR AG + L + ++ S +NSL
Sbjct: 120 RNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSL 179
Query: 233 LNALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG 291
L+ L+K+ A +F E R Y PD++TFN LI G + V +AF F DM +
Sbjct: 180 LSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYH 239
Query: 292 CSPDIVTYNTLISGLCRVNEVARGHELLK-EVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
C+PD+VTYNT+I GLCR +V H +L +K ++ P+VV+YT+++ GYC ++D+
Sbjct: 240 CNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDE 299
Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG-------YLPDVV 403
A ++++M S G+KP+AVT+N LI G + + Y + + G + PD
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSE-----AHRYDEIKDILIGGNDAFTTFAPDAC 354
Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
TF+ LI +C G L+ +K+ EM L P+ ++++LI LC N + A +L
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 464 KWNDLV-------PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
+++ P YNP+ + C G +A + ++ KR D ++ LI G
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQL-MKRGVQDPPSYKTLITG 473
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
HC +G+ A + MLR PD T LI LLK G A +QR
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQR 524
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 166/337 (49%), Gaps = 23/337 (6%)
Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
FN LI+ G +++ + F M G SP ++T+N+L+S L + H+L E++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
+PD T+ ++I+G+CK +D+A I+ +M P VT+N +IDG + G +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 384 VSAEYMRERML--SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
A + ML + P+VV++++L+ GYC ++++ + + +M + L PN T+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 442 ILINALCKENRLNDARRFLKQLKWND----LVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
LI L + +R ++ + L + ND P +N +I C AG++D A + E
Sbjct: 321 TLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 378
Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML-------RIGCAPDDITVNSLIS 550
M + PD ++++LI CM+ A ++FN++ + C P N +
Sbjct: 379 MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE 438
Query: 551 CLLKGGMPNEA---FR-IMQRASEDQNLQLPSWKKAV 583
L G +A FR +M+R +D PS+K +
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGVQDP----PSYKTLI 471
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 166/394 (42%), Gaps = 24/394 (6%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL--- 214
+Y ++R C D +VF M S G PN+ + A + D K +L
Sbjct: 283 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGG 342
Query: 215 ----SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
+ F P T +N L+ A + D A+ +F+E + PD+ ++++LI+
Sbjct: 343 NDAFTTFAPDACT-----FNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRT 397
Query: 271 LSRIGEVKKAFEFFYDM-------GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
L E +A F ++ G C P YN + LC + + ++ +++
Sbjct: 398 LCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM 457
Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
+ P +Y ++I+G+C+ GK A + M P T+ +LIDG K+G
Sbjct: 458 KRGVQDPP--SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEA 515
Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
+ A +RML YLP TF S++ + N+ L M K + N+ T +
Sbjct: 516 LLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQV 575
Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
+ L + A ++ L N + K ++ C+ + +A+ +V EK
Sbjct: 576 VRLLFSSAQKEKAFLIVRLLYDNGYLVK---MEELLGYLCENRKLLDAHTLVLFCLEKSQ 632
Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
D T +I G C R EA S++N+++ +G
Sbjct: 633 MVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 132/329 (40%), Gaps = 41/329 (12%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+N+++++ C+ G D+ VF M + P+S + + + D A+ L ++
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 218 RPGEVTMS-------TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
EV + YN + L +A +F++ + Q D ++ LI G
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITG 473
Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
R G+ K A+E M PD+ TY LI GL ++ E H+ L+ + +S + P
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM-LRSSYLP 532
Query: 331 DVVTYTSVIS----------GYCKLGKM---------DKATGIYNEMNSCGIKPSAVTFN 371
T+ SV++ +C + M D +T + + S K A
Sbjct: 533 VATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIV 592
Query: 372 VLIDGFGKVGNM-------------VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQL 418
L+ G + M + A + L + D+ T +++I+G C++ +
Sbjct: 593 RLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRH 652
Query: 419 NQGLKLCDEMKGKNLSPNVYTFTILINAL 447
++ L +E+ + +L NAL
Sbjct: 653 SEAFSLYNELVELGNHQQLSCHVVLRNAL 681
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 95/247 (38%), Gaps = 20/247 (8%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
+Y ++ C G + M +P+ E + ++ G+ A L +
Sbjct: 466 SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 525
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEA----VYMFKEYFRLYSQPDTWTFNILIQGLS 272
R + ++T ++S+L L K+ A+E+ M ++ R T +L
Sbjct: 526 LRSSYLPVAT-TFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSS-- 582
Query: 273 RIGEVKKAF---EFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
+ +KAF YD G +V L+ LC ++ H L+ KS+
Sbjct: 583 --AQKEKAFLIVRLLYDNGY------LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMV 634
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
D+ T +VI G CK + +A +YNE+ G VL + G +++
Sbjct: 635 -DIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFV 693
Query: 390 RERMLSF 396
+RM +
Sbjct: 694 SKRMATL 700
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 211/438 (48%), Gaps = 46/438 (10%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
T++ ++ C G + D M P+ + ++ G+ A L+ +
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
F+P EVT Y +LN L K N+ A+ +F++ + ++I+I L
Sbjct: 202 VEYGFQPDEVT-----YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
+ G A F +M G D+VTY++LI GLC + G ++L+E+ PDV
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-IGRNIIPDV 315
Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
VT++++I + K GK+ +A +YNEM + GI P +T+N LIDGF K + A M +
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 393 MLSFGYLPDVVTFSSLID-----------------------------------GYCRNGQ 417
M+S G PD+VT+S LI+ G+C++G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
LN +L EM + + P+V T+ IL++ LC LN A ++++ + + +YN
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
+I G C A VD+A + + +K KPD VT+ ++I G C KG + EA +F KM G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 538 CAPDDITVNSLISCLLKG 555
C PDD T N LI L G
Sbjct: 556 CTPDDFTYNILIRAHLGG 573
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 203/395 (51%), Gaps = 1/395 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TY V+ LC+ G +F M + + S + G D A L ++
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ Y+SL+ L D+ M +E PD TF+ LI + G++
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+A E + +M + G +PD +TYN+LI G C+ N + +++ ++ PD+VTY+
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDIVTYSI 390
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I+ YCK ++D ++ E++S G+ P+ +T+N L+ GF + G + +A+ + + M+S G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
P VVT+ L+DG C NG+LN+ L++ ++M+ ++ + + I+I+ +C ++++DA
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
L + P YN +I G CK G++ EA+++ +M+E C PD T+ ILI H
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
++ ++ + +M G + D T+ +I L
Sbjct: 571 LGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 208/430 (48%), Gaps = 7/430 (1%)
Query: 139 GLKFLEFSRVNLSLNHSFKTYNLVMRS-LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFF 197
G L +S S+ + +Y +R+ + ++ ++D++ + F+ M LP
Sbjct: 22 GTSLLHYS----SITEAKLSYKERLRNGIVDIKVNDAIDL-FESMIQSRPLPTPIDFNRL 76
Query: 198 VSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYS 257
S+ R + D G + + ++N ++ A + ++L
Sbjct: 77 CSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGY 136
Query: 258 QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHE 317
+PDT TF+ L+ G G V +A M PD+VT +TLI+GLC V+
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 318 LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGF 377
L+ + + F PD VTY V++ CK G A ++ +M IK S V ++++ID
Sbjct: 197 LIDRM-VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 378 GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNV 437
K G+ A + M G DVVT+SSLI G C +G+ + G K+ EM G+N+ P+V
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
TF+ LI+ KE +L +A+ ++ + P YN +IDGFCK + EAN +
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGM 557
M K C+PD VT++ILI +C R+ + + +F ++ G P+ IT N+L+ + G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 558 PNEAFRIMQR 567
N A + Q
Sbjct: 436 LNAAKELFQE 445
Score = 182 bits (461), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 174/347 (50%), Gaps = 1/347 (0%)
Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
T +++L+N + EAV + + +PD T + LI GL G V +A
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 199
Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
M +G PD VTY +++ LC+ A +L ++++ ++ VV Y+ VI CK
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN-IKASVVQYSIVIDSLCKD 258
Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
G D A ++NEM GIK VT++ LI G G M M+ +PDVVTF
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
S+LID + + G+L + +L +EM + ++P+ T+ LI+ CKEN L++A + +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
P Y+ +I+ +CKA VD+ + E+ K P+ +T+ L++G C G++
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
A +F +M+ G P +T L+ L G N+A I ++ + +
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 1/185 (0%)
Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
E M+ LP + F+ L R Q + L C M+ + ++YT TI+IN C++
Sbjct: 59 ESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRK 118
Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
+L A L + P ++ +++GFC G V EA +V M E + +PD VT
Sbjct: 119 KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTV 178
Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
+ LI G C+KGR+ EA+ + ++M+ G PD++T +++ L K G A + R E
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF-RKME 237
Query: 571 DQNLQ 575
++N++
Sbjct: 238 ERNIK 242
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 60/152 (39%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
S TY +++ LC+ G + +F+ M+ + + A K D A L
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
V YN ++ L K+ + EA +F++ PD +T+NILI+
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
+ + E +M G S D T +I L
Sbjct: 574 SGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 222/466 (47%), Gaps = 17/466 (3%)
Query: 121 LSPLNSLEVIKRL-DNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSL-CEMGLHDSVQV- 177
L+P+ V+ L ++PKL KF ++S HS ++Y +V L C +D+ V
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVL 165
Query: 178 -----------VFDYMRSDGHL--PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTM 224
VFD + S ++ P + + S I G + A S+ + V
Sbjct: 166 KEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFP 225
Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
T N LL+ K D+ FK+ ++P +T+NI+I + + G+V+ A F
Sbjct: 226 KTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF 285
Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
+M G PD VTYN++I G +V + +E+K PDV+TY ++I+ +CK
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK-DMCCEPDVITYNALINCFCK 344
Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
GK+ Y EM G+KP+ V+++ L+D F K G M A M G +P+ T
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
++SLID C+ G L+ +L +EM + NV T+T LI+ LC R+ +A ++
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
++P YN +I GF KA N+D A ++ E++ + KPD + + I G C ++
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 525 EAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
A + N+M G + + +L+ K G P E ++ E
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 200/421 (47%), Gaps = 1/421 (0%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
F ++ + L ++G+ + F M+ P + + + GK D K
Sbjct: 191 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 250
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
+ F YN +++ + K+ + + A +F+E PDT T+N +I G ++
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 310
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
G + FF +M C PD++TYN LI+ C+ ++ G E +E+K + P+VV+
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK-GNGLKPNVVS 369
Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
Y++++ +CK G M +A Y +M G+ P+ T+ LID K+GN+ A + ML
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
G +VVT+++LIDG C ++ + +L +M + PN+ ++ LI+ K ++
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
A L +LK + P +Y I G C ++ A V++ EM+E K + + +T L+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
+ G E + + ++M + +T LI L K + ++A R S D L
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 575 Q 575
Q
Sbjct: 610 Q 610
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 201/428 (46%), Gaps = 8/428 (1%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++ C+ G + M+ +G PN V + + G A
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
R + + + Y SL++A K N +A + E ++ + + T+ LI GL +
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
K+A E F M + G P++ +YN LI G + + R ELL E+K + PD++ Y +
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG-IKPDLLLYGT 512
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
I G C L K++ A + NEM CGIK +++ + L+D + K GN ++ + M
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK-NLSPNVYTFTILINALCKENRLNDA 456
VVTF LIDG C+N +++ + + + L N FT +I+ LCK+N++ A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
+Q+ LVP Y ++DG K GNV EA + +M E K D + +T L+ G
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM------QRASE 570
++ +A S +M+ G PD++ S++ + G +EA + Q +
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS 752
Query: 571 DQNLQLPS 578
D + LP+
Sbjct: 753 DNDNALPN 760
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 210/417 (50%), Gaps = 1/417 (0%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
S ++ ++ ++ +M +D V +++ M+ G N ++ R + A L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
+ S + SLLN + + +A+YMF + + +P+ +N +I GL +
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
+V A + M G PD+VTYN+LISGLC + ++ + K E PDV T
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT-KREIYPDVFT 258
Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
+ ++I K G++ +A Y EM + P VT+++LI G + AE M M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
S G PDVVT+S LI+GYC++ ++ G+KL EM + + N T+TILI C+ +LN
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
A +++ + + P YN ++ G C G +++A VI+A+M++ D VT+ I+I
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
G C G + +A I+ + G PD T +++ L K G+ EA + ++ ED
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 2/376 (0%)
Query: 132 RLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNS 191
R L L FL + L S T+ ++ C +FD M G+ PN
Sbjct: 128 RCSQLSLALSFLG-KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 192 PMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE 251
+ + ++ + D A LL++ + YNSL++ L +A M
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 252 YFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE 311
+ PD +TFN LI + G V +A EF+ +M PDIVTY+ LI GLC +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 312 VARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFN 371
+ E+ + K F PDVVTY+ +I+GYCK K++ ++ EM+ G+ + VT+
Sbjct: 307 LDEAEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
+LI G+ + G + AE + RM+ G P+++T++ L+ G C NG++ + L + +M+
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
+ ++ T+ I+I +CK + DA L L+P + Y ++ G K G EA
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 492 NVIVAEMEEKRCKPDK 507
+ + +M+E P++
Sbjct: 486 DALFRKMKEDGILPNE 501
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 35/256 (13%)
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
P + ++ ++S K+ K D ++ +M GI + T N+L++ F + + A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
+M+ G+ P +VTF SL++G+CR ++ L + D+M G PNV + +I+ LCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 450 ENRLNDARRFLKQL-----------------------KWND------------LVPKPFM 474
++++A L ++ +W+D + P F
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
+N +ID K G V EA EM + PD VT+++LI G CM R+ EA +F M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 535 RIGCAPDDITVNSLIS 550
GC PD +T + LI+
Sbjct: 319 SKGCFPDVVTYSILIN 334
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 3/243 (1%)
Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
Y ++ + K+D + ++ M C PS F+ L+ K+ Y+ E+M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
G ++ T + L++ +CR QL+ L +M P++ TF L+N C+ +R+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
DA Q+ P +YN +IDG CK+ VD A ++ ME+ PD VT+ LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASED 571
G C GR +A + + M + PD T N+LI +K G +EA + M R S D
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 572 QNL 574
++
Sbjct: 289 PDI 291
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 201/415 (48%), Gaps = 1/415 (0%)
Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
L ++H TY++ + C V M G+ P+ + ++ + +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
A L+ Q TF + +L++ L N A EAV + + + QPD T+ ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
GL + G++ A M + ++V +NT+I LC+ V +L E++ K
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG-IR 290
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
P+VVTY S+I+ C G+ A+ + + M I P+ VTFN LID F K G +V AE +
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
E M+ PD +T++ LI+G+C + +L++ ++ M K+ PN+ T+ LIN CK
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
R+ D +++ LV Y +I GF +AG+ D A ++ +M R D +T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
++IL+ G C G++ A+ IF + + + N++I + K G EA+ +
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 215/428 (50%), Gaps = 14/428 (3%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
S +N ++ ++ +M + V + + M++ G + F++ R + A +L
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
++ + P VT+S SLLN +AV + + + +PDT+TF LI
Sbjct: 142 AKMMKLGYEPDIVTLS-----SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
GL + +A M GC PD+VTY T+++GLC+ ++ LL +++ +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME-AARIK 255
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
+VV + ++I CK ++ A ++ EM + GI+P+ VT+N LI+ G A +
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
ML P+VVTF++LID + + G+L + KL +EM +++ P+ T+ +LIN C
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
NRL++A++ K + D +P YN +I+GFCK V++ + EM ++ + VT
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQ 566
+T +I G G A +F +M+ D +T + L+ L G + A F+ +Q
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 567 RASEDQNL 574
++ + N+
Sbjct: 496 KSEMELNI 503
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 191/388 (49%), Gaps = 6/388 (1%)
Query: 171 LHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
+ D+V + D ++S P ++EF +S+ + K + L Q + ++ +
Sbjct: 64 VDDAVDLFGDMVKSR---PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
Y+ +N +++ A+ + + +L +PD T + L+ G + A M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
G PD T+ TLI GL N+ + L+ ++ + PD+VTY +V++G CK G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
D A + N+M + IK + V FN +ID K ++ A + M + G P+VVT++SL
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
I+ C G+ + +L M K ++PNV TF LI+A KE +L +A + +++ +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
P YN +I+GFC +DEA + M K C P+ T+ LI G C R+ + +
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGG 556
+F +M + G + +T ++I + G
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 176/365 (48%), Gaps = 1/365 (0%)
Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
K D A L S +N LL+A+ K N + + + ++ L D +T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
I I R ++ A M G PDIVT ++L++G C ++ L+ ++ +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM-VE 181
Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
+ PD T+T++I G K +A + ++M G +P VT+ +++G K G++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
A + +M + +VV F+++ID C+ + + L EM+ K + PNV T+ LIN
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
LC R +DA R L + + P +N +ID F K G + EA + EM ++ P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
D +T+ +LI G CM R+ EA +F M+ C P+ T N+LI+ K + +
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 566 QRASE 570
+ S+
Sbjct: 422 REMSQ 426
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 189/405 (46%), Gaps = 5/405 (1%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TY V+ LC+ G D + + M + N + + S + + A L ++
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ + YNSL+N L +A + P+ TFN LI + G++
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+A + +M PD +TYN LI+G C N + ++ K + K + P++ TY +
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK-DCLPNIQTYNT 403
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I+G+CK +++ ++ EM+ G+ + VT+ +I GF + G+ SA+ + ++M+S
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
D++T+S L+ G C G+L+ L + ++ + N++ + +I +CK ++ +A
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
L + P YN +I G C + EA+ + +M+E P+ T+ LI +
Sbjct: 524 DLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRAN 580
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
+ + +M G D T+ SL++ +L G +++F
Sbjct: 581 LRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 135/338 (39%), Gaps = 36/338 (10%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++ LC G + M PN + + + GK A+ L +
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ T YN L+N N DEA MFK P+ T+N LI G + V
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+ E F +M G + VTY T+I G + + + K++ + D++TY+
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM-VSNRVPTDIMTYSI 473
Query: 338 VISGYCKLGKMDKATGIYN-------EMN-------------------------SCGIKP 365
++ G C GK+D A I+ E+N S IKP
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP 533
Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
VT+N +I G + A+ + +M G LP+ T+++LI R+ +L
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593
Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
EM+ + T +++ N L + RL+ + FL L
Sbjct: 594 KEMRSSGFVGDASTISLVTNML-HDGRLD--KSFLNML 628
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 52/109 (47%)
Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
IL N L +++DA + + P +N ++ K + + +M+
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
D T++I I C + ++ A+++ KM+++G PD +T++SL++
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 212/434 (48%), Gaps = 11/434 (2%)
Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
N L S T N V+ E+GL + + VFD M G +P+S + V C R GK
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234
Query: 209 AAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
A L+ F P T + +L AL + + A++ F++ L +P+
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTL-----ILTALCENGLVNRAIWYFRKMIDLGFKPNLIN 289
Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
F LI GL + G +K+AFE +M G P++ T+ LI GLC+ + L ++
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
+ P+V TYTS+I GYCK K+++A +++ M G+ P+ T+ LI+G K G+
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
A + M G++P++ T+++ ID C+ + + +L ++ L + T+TIL
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
I CK+N +N A F ++ + N +I FC+ + E+ + +
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
P K T+T +I +C +G + A+ F+ M R GC PD T SLIS L K M +EA +
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589
Query: 564 IMQRASEDQNLQLP 577
+ + A D+ L P
Sbjct: 590 LYE-AMIDRGLSPP 602
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 174/363 (47%), Gaps = 2/363 (0%)
Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
G+ + A G++ + +T S+ N +L V+ + A +F E PD+ ++
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
+++ G R G++++A + M G PD T +++ LC V R +++
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM-I 279
Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
F P+++ +TS+I G CK G + +A + EM G KP+ T LIDG K G
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 339
Query: 385 SAEYMRERML-SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
A + +++ S Y P+V T++S+I GYC+ +LN+ L MK + L PNV T+T L
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 399
Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
IN CK A + + +P + YN ID CK EA ++ +
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
+ D VT+TILI C + + +A++ F +M + G D N LI+ + E+ R
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519
Query: 564 IMQ 566
+ Q
Sbjct: 520 LFQ 522
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 182/423 (43%), Gaps = 5/423 (1%)
Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSS-CIRAGK 206
++L + + ++ LC+ G + + M +G PN + C R
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
A + L R + Y S++ K++ + A +F P+ T+
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
LI G + G +A+E MG G P+I TYN I LC+ + +ELL + F
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA-FSC 457
Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSA 386
D VTYT +I CK +++A + MN G + N+LI F + M +
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 387 EYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINA 446
E + + ++S G +P T++S+I YC+ G ++ LK MK P+ +T+ LI+
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
LCK++ +++A + + + L P + +CK + A +++ +++K
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIR- 636
Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
T L+ C + ++ A F K+L + D +T+ + + + G N + +
Sbjct: 637 --TVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTE 694
Query: 567 RAS 569
R S
Sbjct: 695 RIS 697
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 120/235 (51%), Gaps = 1/235 (0%)
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
++ + ++G++++A G+ +M + G+ PS++T N +++ ++G + AE + + M G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
+PD ++ ++ G R+G++ + + M + P+ T T+++ ALC+ +N A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+ +++ P + +IDG CK G++ +A ++ EM KP+ T T LI G
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 518 CMKGRMVEAISIFNKMLRIGC-APDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
C +G +A +F K++R P+ T S+I K N A + R E
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 210/422 (49%), Gaps = 14/422 (3%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
S ++ ++ ++ +M D V + + M++ G N ++ R + A +L
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 215 SQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
+ + P VT+S SLLN EAV + + F QP+T TFN LI
Sbjct: 140 GKMMKLGYEPNIVTLS-----SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
GL + +A M + GC PD+VTY +++GLC+ + LL +++ + +
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME-QGKLE 253
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
P V+ Y ++I G CK MD A ++ EM + GI+P+ VT++ LI G A +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
M+ PDV TFS+LID + + G+L + KL DEM +++ P++ T++ LIN C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
+RL++A++ + + P YN +I GFCK V+E + EM ++ + VT
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQ 566
+ ILI G G A IF +M+ G P+ +T N+L+ L K G +A F +Q
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 567 RA 568
R+
Sbjct: 494 RS 495
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 198/408 (48%), Gaps = 1/408 (0%)
Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
NL + H+ TY++++ C V M G+ PN + ++ + +
Sbjct: 109 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168
Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
A L+ Q +T +N+L++ L N A EA+ + QPD T+ +++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
GL + G+ AF M P ++ YNT+I GLC+ + L KE++ K
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG-I 287
Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
P+VVTY+S+IS C G+ A+ + ++M I P TF+ LID F K G +V AE
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
+ + M+ P +VT+SSLI+G+C + +L++ ++ + M K+ P+V T+ LI C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
K R+ + +++ LV YN +I G +AG+ D A I EM P+ +
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 509 TFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
T+ L+ G C G++ +A+ +F + R P T N +I + K G
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 188 bits (478), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 204/405 (50%), Gaps = 9/405 (2%)
Query: 166 LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVT 223
L E+ L D+V + + ++S P +IEF +S+ + K D L Q + +
Sbjct: 57 LSELKLDDAVALFGEMVKSR---PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 224 MSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
+ + Y+ L+N +++ A+ + + +L +P+ T + L+ G + +A
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
M G P+ VT+NTLI GL N+ + L+ + K PD+VTY V++G C
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLC 232
Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
K G D A + N+M ++P + +N +IDG K +M A + + M + G P+VV
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
T+SSLI C G+ + +L +M + ++P+V+TF+ LI+A KE +L +A + ++
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
+ P Y+ +I+GFC +DEA + M K C PD VT+ LI G C R+
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGG---MPNEAFRIM 565
E + +F +M + G + +T N LI L + G M E F+ M
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 215/440 (48%), Gaps = 37/440 (8%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+N ++ L + D M + G P+ V+ + G D A LL++
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE------------YFRLYS-------- 257
G++ +YN++++ L K + D+A+ +FKE Y L S
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 258 ---------------QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
PD +TF+ LI + G++ +A + + +M P IVTY++L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
I+G C + + ++ + + K F PDVVTY ++I G+CK ++++ ++ EM+ G
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
+ + VT+N+LI G + G+ A+ + + M+S G P+++T+++L+DG C+NG+L + +
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
+ + ++ + P +YT+ I+I +CK ++ D L + P YN +I GF
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
C+ G+ +EA+ + EM+E P+ + LI G + + +M G A D
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 606
Query: 543 ITVNSLISCLLKGGMPNEAF 562
T+ L++ +L G +++F
Sbjct: 607 STI-GLVTNMLHDGRLDKSF 625
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%)
Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
K+D A ++ EM PS + F+ L+ K+ + E+M + G + T+S
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
LI+ +CR QL L + +M PN+ T + L+N C R+++A + Q+
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
P +N +I G EA ++ M K C+PD VT+ +++ G C +G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
++ NKM + P + N++I L K ++A + +
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 91/174 (52%)
Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
P ++ FS L+ + + + + L ++M+ + N YT++ILIN C+ ++L A
Sbjct: 78 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137
Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
L ++ P + +++G+C + + EA +V +M +P+ VTF LI G
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
+ + EA+++ ++M+ GC PD +T +++ L K G + AF ++ + + +
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 251
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Query: 414 RNG----QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
RNG +L+ + L EM P++ F+ L++A+ K N+ + +Q++ +
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
+ Y+ +I+ FC+ + A ++ +M + +P+ VT + L+ G+C R+ EA+++
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
++M G P+ +T N+LI L +EA ++ R
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 220/480 (45%), Gaps = 37/480 (7%)
Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
L I ++ L + F E + L ++H+ TYN+++ LC + M G
Sbjct: 72 LSAIAKMKKFDLVISFGEKMEI-LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
+ P+ + ++ + A L+ Q T + +L++ L + N A EAV
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
+ + QPD T+ +I GL + GE A M D+V Y+T+I L
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
C+ V L E+ K PDV TY+S+IS C G+ A+ + ++M I P+
Sbjct: 251 CKYRHVDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
VTFN LID F K G ++ AE + + M+ P++VT++SLI+G+C + +L++ ++
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 427 EMKGKNLSPNVYTFTILINALCKENRLND------------------------------- 455
M K+ P+V T+ LIN CK ++ D
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 456 ----ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
A+ KQ+ + + P YN ++DG CK G +++A V+ +++ + +PD T+
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
I+ G C G++ + +F + G PD I N++IS K G+ EA+ + + ED
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 186/361 (51%), Gaps = 9/361 (2%)
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
+ P VT+ NSLLN N EAV + + + QPDT TF L+ GL + +
Sbjct: 131 YGPSIVTL-----NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
+A M GC PD+VTY +I+GLC+ E LL +++ K + DVV Y+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KGKIEADVVIYS 244
Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
+VI CK +D A ++ EM++ GI+P T++ LI G A + ML
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
P+VVTF+SLID + + G+L + KL DEM +++ PN+ T+ LIN C +RL++A
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
++ + D +P YN +I+GFCKA V + + +M + + VT+T LI G
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
A +F +M+ G P+ +T N+L+ L K G +A F +Q++ + +
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 574 L 574
+
Sbjct: 485 I 485
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 197/399 (49%), Gaps = 1/399 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+ ++ L + + + M G P+ ++ + G+ D A LL++
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
G++ +Y++++++L K + D+A+ +F E +PD +T++ LI L G
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
A DM +P++VT+N+LI + ++ +L E+ + P++VTY S
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM-IQRSIDPNIVTYNS 350
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I+G+C ++D+A I+ M S P VT+N LI+GF K +V + M G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
+ + VT+++LI G+ + + + +M + PN+ T+ L++ LCK +L A
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+ L+ + + P + YN + +G CKAG V++ + + K KPD + + +I G
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
C KG EA ++F KM G PD T N+LI L+ G
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 198/405 (48%), Gaps = 2/405 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TY V+ LC+ G D + + M + + + S + D A L ++
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ F Y+SL++ L +A + + P+ TFN LI ++ G++
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+A + F +M P+IVTYN+LI+G C + + ++ + + PDVVTY +
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT-LMVSKDCLPDVVTYNT 385
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I+G+CK K+ ++ +M+ G+ + VT+ LI GF + + +A+ + ++M+S G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
P+++T+++L+DG C+NG+L + + + + ++ + P++YT+ I+ +CK ++ D
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
L + P YN +I GFCK G +EA + +M+E PD T+ LI H
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
G + + +M A D T L++ +L G ++ F
Sbjct: 566 LRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKGF 609
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 178/367 (48%), Gaps = 8/367 (2%)
Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
K D A L + S ++ LL+A+ K D + ++ L + +T+N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
I+I L R ++ A M G P IVT N+L++G C N ++ L+ ++ +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM-VE 163
Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
+ PD VT+T+++ G + K +A + M G +P VT+ +I+G K G
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
A + +M DVV +S++ID C+ ++ L L EM K + P+V+T++ LI+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
LC R +DA R L + + P +N +ID F K G + EA + EM ++ P
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG-----GMPNE 560
+ VT+ LI G CM R+ EA IF M+ C PD +T N+LI+ K GM E
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM--E 401
Query: 561 AFRIMQR 567
FR M R
Sbjct: 402 LFRDMSR 408
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 153/305 (50%), Gaps = 10/305 (3%)
Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF---SPDV 332
++ +A + F +M P IV ++ L+S + ++ + +L+ K E S ++
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKF----DLVISFGEKMEILGVSHNL 100
Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
TY +I+ C+ ++ A I +M G PS VT N L++GF + A + ++
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
M+ GY PD VTF++L+ G ++ + ++ + L + M K P++ T+ +IN LCK
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
+ A L +++ + +Y+ VID CK +VD+A + EM+ K +PD T++
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRAS 569
LI C GR +A + + ML P+ +T NSLI K G EA F M + S
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 570 EDQNL 574
D N+
Sbjct: 341 IDPNI 345
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 203/408 (49%), Gaps = 4/408 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN+++ C+ G ++ V D M P+ + S +GK A +L +
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ Y L+ A + + A+ + E PD T+N+L+ G+ + G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+A +F DM S GC P+++T+N ++ +C +LL ++ + FSP VVT+
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNI 349
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I+ C+ G + +A I +M G +P+++++N L+ GF K M A ERM+S G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
PD+VT+++++ C++G++ +++ +++ K SP + T+ +I+ L K + A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+ L +++ DL P Y+ ++ G + G VDEA E E +P+ VTF +++G
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
C + AI M+ GC P++ + LI L GM EA ++
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 203/420 (48%), Gaps = 4/420 (0%)
Query: 144 EFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIR 203
+S VN S N +R + G + + M G++P+ + R
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 204 AGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
GK A +L YN +++ K + A+ + R+ PD T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVT 206
Query: 264 FNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
+N +++ L G++K+A E M C PD++TY LI CR + V +LL E++
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
+ +PDVVTY +++G CK G++D+A N+M S G +P+ +T N+++ G
Sbjct: 267 DRG-CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
+ AE + ML G+ P VVTF+ LI+ CR G L + + + ++M PN ++ L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
++ CKE +++ A +L+++ P YN ++ CK G V++A I+ ++ K C
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
P +T+ +I G G+ +AI + ++M PD IT +SL+ L + G +EA +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 196/388 (50%), Gaps = 1/388 (0%)
Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
+S++ TYN ++RSLC+ G V D M P+ + + R
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
A LL + R T YN L+N + K+ DEA+ + QP+ T NI+++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
+ G A + DM G SP +VT+N LI+ LCR + R ++L+++ +
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-QHGCQ 376
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
P+ ++Y ++ G+CK KMD+A M S G P VT+N ++ K G + A +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
++ S G P ++T++++IDG + G+ + +KL DEM+ K+L P+ T++ L+ L +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
E ++++A +F + + + P +N ++ G CK+ D A + M + CKP++ +
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIG 537
+TILI G +G EA+ + N++ G
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 162/307 (52%), Gaps = 4/307 (1%)
Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
PD T+N++I G + GE+ A M SPD+VTYNT++ LC ++ + E+
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
L + + + PDV+TYT +I C+ + A + +EM G P VT+NVL++G
Sbjct: 227 LDRM-LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
K G + A M S G P+V+T + ++ C G+ KL +M K SP+V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
TF ILIN LC++ L A L+++ + P YNP++ GFCK +D A + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
+ C PD VT+ ++ C G++ +A+ I N++ GC+P IT N++I L K G
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 559 NEAFRIM 565
+A +++
Sbjct: 466 GKAIKLL 472
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 172/340 (50%), Gaps = 4/340 (1%)
Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
N+ L +V+ +E + + PD LI+G R+G+ +KA + +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
G PD++TYN +ISG C+ E+ +L + SPDVVTY +++ C GK+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLK 221
Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
+A + + M P +T+ +LI+ + + A + + M G PDVVT++ L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
+G C+ G+L++ +K ++M PNV T I++ ++C R DA + L +
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
P +N +I+ C+ G + A I+ +M + C+P+ +++ L+ G C + +M AI
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
+M+ GC PD +T N++++ L K G +A I+ + S
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 158/315 (50%), Gaps = 3/315 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK-CDAAKGLLSQ 216
TYN+++ +C+ G D + M S G PN + S G+ DA K L
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
R G + S +N L+N L ++ A+ + ++ + QP++ ++N L+ G + +
Sbjct: 336 LRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
+ +A E+ M S GC PDIVTYNT+++ LC+ +V E+L ++ K SP ++TY
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-CSPVLITYN 453
Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
+VI G K GK KA + +EM + +KP +T++ L+ G + G + A
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
G P+ VTF+S++ G C++ Q ++ + M + PN ++TILI L E +A
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 457 RRFLKQLKWNDLVPK 471
L +L L+ K
Sbjct: 574 LELLNELCNKGLMKK 588
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 216/420 (51%), Gaps = 7/420 (1%)
Query: 139 GLKFLEF---SRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
GL+F ++ S +N++++ + ++NLV+++LC++ D VF M LP+
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC 226
Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRL 255
+ + + D A LL + + + S +YN L++ L K+ + + F
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 256 YSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
P+ T+N LI GL G++ KA M S C P+ VTY TLI+GL +
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 316 HELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID 375
LL ++ + + + Y+ +ISG K GK ++A ++ +M G KP+ V ++VL+D
Sbjct: 347 VRLLSSMEERG-YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 376 GFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSP 435
G + G A+ + RM++ G LP+ T+SSL+ G+ + G + +++ EM S
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 436 NVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIV 495
N + +++LI+ LC R+ +A ++ + P Y+ +I G C G++D A +
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Query: 496 AEM---EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
EM EE + +PD VT+ IL+ G CM+ + A+ + N ML GC PD IT N+ ++ L
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 177/336 (52%), Gaps = 1/336 (0%)
Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
+N ++ AL K D A+ +F+ PD +T+ L+ GL + + +A +M
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
S GCSP V YN LI GLC+ ++ R +L+ + K P+ VTY ++I G C GK+
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG-CVPNEVTYNTLIHGLCLKGKL 308
Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
DKA + M S P+ VT+ LI+G K A + M GY + +S L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
I G + G+ + + L +M K PN+ +++L++ LC+E + N+A+ L ++ +
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
+P + Y+ ++ GF K G +EA + EM++ C +K +++LI G C GR+ EA+
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
+++KML IG PD + +S+I L G + A ++
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 197/381 (51%), Gaps = 10/381 (2%)
Query: 191 SPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFK 250
S MIE + +S G D+ + LLS+ R + + + A K + D+AV +F
Sbjct: 81 SSMIESYANS----GDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFH 136
Query: 251 EYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFF-YDMGS---FGCSPDIVTYNTLISG 305
+ + +FN ++ + G + EF+ Y + S SP+ +++N +I
Sbjct: 137 RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKA 196
Query: 306 LCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKP 365
LC++ V R E+ + + + + PD TY +++ G CK ++D+A + +EM S G P
Sbjct: 197 LCKLRFVDRAIEVFRGMP-ERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255
Query: 366 SAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLC 425
S V +NVLIDG K G++ + + M G +P+ VT+++LI G C G+L++ + L
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKA 485
+ M PN T+ LIN L K+ R DA R L ++ +Y+ +I G K
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 486 GNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITV 545
G +EA + +M EK CKP+ V +++L+ G C +G+ EA I N+M+ GC P+ T
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 546 NSLISCLLKGGMPNEAFRIMQ 566
+SL+ K G+ EA ++ +
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWK 456
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 171/408 (41%), Gaps = 55/408 (13%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
YN+++ LC+ G V + D M G +PN + GK D A LL +
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
+ + Y +L+N LVKQ A +AV + + +++LI GL + G+ +
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
+A + M GC P+IV Y+ L+ GLCR + E+L + S P+ TY+S+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM-IASGCLPNAYTYSSL 438
Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
+ G+ K G ++A ++ EM+ G + ++VLIDG VG + A + +ML+ G
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 399 --------------------------------------LPDVVTFSSLIDGYCRNGQLNQ 420
PDVVT++ L+DG C +++
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISR 558
Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALC-KENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
+ L + M + P+V T +N L K N + R FL++L +
Sbjct: 559 AVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL---------------V 603
Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
K V A IV M K P T+ +++ C ++ AI
Sbjct: 604 VRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 4/309 (1%)
Query: 263 TFNILIQGLSRIGEVKKAFEFFYDM-GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
+F ++ + + KA + F+ M F C + ++N++++ + RG E
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 322 V---KFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
V SP+ +++ VI CKL +D+A ++ M P T+ L+DG
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
K + A + + M S G P V ++ LIDG C+ G L + KL D M K PN
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
T+ LI+ LC + +L+ A L+++ + +P Y +I+G K +A +++ M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
EE+ ++ +++LI G +G+ EA+S++ KM GC P+ + + L+ L + G P
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 559 NEAFRIMQR 567
NEA I+ R
Sbjct: 414 NEAKEILNR 422
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 150/298 (50%), Gaps = 8/298 (2%)
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+K F+ MGSF T +++I + +LL ++ ++ + ++
Sbjct: 61 EKMFKSAPKMGSFKLGDS--TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIER-SFIV 117
Query: 338 VISGYCKLGKMDKATGIYNEM-NSCGIKPSAVTFNVLIDGFGKVG----NMVSAEYMRER 392
V Y K DKA +++ M + K S +FN +++ G + +Y+
Sbjct: 118 VFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS 177
Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
++ P+ ++F+ +I C+ +++ +++ M + P+ YT+ L++ LCKE R
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEER 237
Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
+++A L +++ P P +YN +IDG CK G++ +V M K C P++VT+
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
LI G C+KG++ +A+S+ +M+ C P+D+T +LI+ L+K +A R++ E
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 197/398 (49%), Gaps = 6/398 (1%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
++N ++ C+ GL D V D M + G P + ++ + G+ D A+ LLS
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+V YN+L++ +K EA +F + P T+N LI GL G +
Sbjct: 370 AAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+ A +M + PD++TY TL+ G + ++ E+ E+ + PD YT+
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM-LRKGIKPDGYAYTT 484
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIK-PSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
G +LG DKA ++ EM + P +NV IDG KVGN+V A + ++
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
G +PD VT++++I GY NGQ L DEM K L P+V T+ +LI K RL A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
++ ++K + P +N ++ G CKAGN+DEA + +MEE+ P+K ++T+LI
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
+C + E + ++ +ML PD T +L L K
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 218/481 (45%), Gaps = 55/481 (11%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
S + N+V++ L + + + V++ M G +P + SC +AG + +
Sbjct: 202 SVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIW 261
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
+ + + S YN L+N K +EA + R ++FN LI+G +
Sbjct: 262 LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQ 321
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
G A+ +M + G P TYN I LC + ELL + +PDVV+
Sbjct: 322 GLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA-----APDVVS 376
Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
Y +++ GY K+GK +A+ +++++ + I PS VT+N LIDG + GN+ A+ ++E M
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436
Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT------------- 441
+ PDV+T+++L+ G+ +NG L+ ++ DEM K + P+ Y +T
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496
Query: 442 -----------------------ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPV 478
+ I+ LCK L A F +++ LVP Y V
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 479 IDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGC 538
I G+ + G A + EM KR P +T+ +LI GH GR+ +A +M + G
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Query: 539 APDDITVNSLISCLLKGGMPNEAFRIMQRASED--------------QNLQLPSWKKAVP 584
P+ +T N+L+ + K G +EA+R + + E+ +N W++ V
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVK 676
Query: 585 L 585
L
Sbjct: 677 L 677
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 174/387 (44%), Gaps = 5/387 (1%)
Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
+N + + TYN+ + +LC+ G D + + M + P+ + I+ GK
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKF 390
Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
A L R G++ S YN+L++ L + N + A + +E PD T+ L
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
++G + G + A E + +M G PD Y T G R+ + + L +E+
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 510
Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
+PD+ Y I G CK+G + KA ++ G+ P VT+ +I G+ + G A
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570
Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
+ + ML P V+T+ LI G+ + G+L Q + EMK + + PNV T L+ +
Sbjct: 571 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630
Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
CK +++A R+L +++ + P + Y +I C +E + EM +K +PD
Sbjct: 631 CKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690
Query: 508 VTFTILIIGHCMKGRMVEAISIFNKML 534
T L H K + ++L
Sbjct: 691 YTHRAL-FKHLEKDHESREVEFLERLL 716
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 166/331 (50%), Gaps = 7/331 (2%)
Query: 237 VKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDI 296
K++ A++ + F++ R P NI+++ L + KA + M G P +
Sbjct: 179 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 238
Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKS-EFSPDVVTYTSVISGYCKLGKMDKATGIY 355
+T+NT++ + ++ R ++ E+K ++ EFS VTY +I+G+ K GKM++A +
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE--VTYNILINGFSKNGKMEEARRFH 296
Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
+M G + +FN LI+G+ K G A + + ML+ G P T++ I C
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
G+++ +L M +P+V ++ L++ K + +A L+ D+ P Y
Sbjct: 357 GRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
N +IDG C++GN++ A + EM + PD +T+T L+ G G + A ++++MLR
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 536 IGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
G PD + L+ G ++AFR+ +
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 4/220 (1%)
Query: 342 YCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPD 401
Y K +K + +M G PS N+++ M A + E M+ G +P
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 402 VVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLK 461
V+TF++++D + G L + K+ EMK +N+ + T+ ILIN K ++ +ARRF
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 462 QLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
++ + P+ +NP+I+G+CK G D+A + EM P T+ I I C G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
R+ +A + + M APD ++ N+L+ +K G EA
Sbjct: 358 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEA 393
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 14/245 (5%)
Query: 159 YNLVMRSLCEMGLHDS---VQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
Y R++ E+ L DS ++ + + +D H P+ + + + G A
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Query: 216 Q-FR----PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
+ FR P VT +T + L N K A ++ E R P T+ +LI G
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKM-----ARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
++ G +++AF++ +M G P+++T+N L+ G+C+ + + L +++ + P
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME-EEGIPP 653
Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
+ +YT +IS C K ++ +Y EM I+P T L K E++
Sbjct: 654 NKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLE 713
Query: 391 ERMLS 395
+LS
Sbjct: 714 RLLLS 718
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%)
Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPK 471
Y + + L ++M K P+V I++ L +N A + + + ++P
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 472 PFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFN 531
+N ++D KAG+++ + I EM+ + + +VT+ ILI G G+M EA
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 532 KMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
M R G A + N LI K G+ ++A+ +
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGV 330
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 191/355 (53%), Gaps = 6/355 (1%)
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
FRP VT+ SLLN + N EAV + P+ +N +I GL + +
Sbjct: 145 FRPSIVTLG-----SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
+ A E FY M G D VTYNTLISGL LL+++ K + P+V+ +T
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM-VKRKIDPNVIFFT 258
Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
++I + K G + +A +Y EM + P+ T+N LI+GF G + A+YM + M+S
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
G PDVVT+++LI G+C++ ++ G+KL EM + L + +T+ LI+ C+ +LN A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
++ ++ + P YN ++D C G +++A V+V ++++ D +T+ I+I G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
C ++ EA +F + R G PD I ++IS L + G+ EA ++ +R ED
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 169/361 (46%), Gaps = 1/361 (0%)
Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
K D A L + S + +L + K N D +Y++ + L D ++F
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
ILI R + A M G P IVT +L++G C+ N L+ +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD-G 177
Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
F P+VV Y +VI+G CK ++ A ++ M GI+ AVT+N LI G G
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
A + M+ P+V+ F++LID + + G L + L EM +++ PNV+T+ LIN
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
C L DA+ + P YN +I GFCK+ V++ + EM +
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
D T+ LI G+C G++ A +FN+M+ G +PD +T N L+ CL G +A ++
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 566 Q 566
+
Sbjct: 418 E 418
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 160/321 (49%), Gaps = 1/321 (0%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
YN V+ LC+ ++ VF M G ++ +S +G+ A LL
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
++ + + +L++ VK+ N EA ++KE R P+ +T+N LI G G +
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
A F M S GC PD+VTYNTLI+G C+ V G +L E+ ++ D TY ++
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG-LVGDAFTYNTL 365
Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
I GYC+ GK++ A ++N M CG+ P VT+N+L+D G + A M E +
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
D++T++ +I G CR +L + L + K + P+ + +I+ LC++ +A +
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 459 FLKQLKWNDLVPKPFMYNPVI 479
+++K + +P +Y+ +
Sbjct: 486 LCRRMKEDGFMPSERIYDETL 506
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++ C+ G + Q VF+ M G P+ + GK + A ++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ E+ + YN ++ L + + EA +F+ R +PD + +I GL R G
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 278 KKAFEFFYDMGSFGCSPDIVTYN 300
++A + M G P Y+
Sbjct: 481 READKLCRRMKEDGFMPSERIYD 503
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 211/396 (53%), Gaps = 8/396 (2%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYM---RSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
++ ++++ CE G ++ FD + G PN + + C + G+ + AK L
Sbjct: 165 SFGILIKGCCEAG---EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
+ + + Y L+N L K + M+++ P+ +T+N ++ L +
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
G K AF+ F +M G S +IVTYNTLI GLCR ++ ++++ ++K +P+++T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK-SDGINPNLIT 340
Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
Y ++I G+C +GK+ KA + ++ S G+ PS VT+N+L+ GF + G+ A M + M
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
G P VT++ LID + R+ + + ++L M+ L P+V+T+++LI+ C + ++N
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
+A R K + + P +YN +I G+CK G+ A ++ EMEEK P+ ++ +I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
C + + EA + KM+ G P ++ SLIS
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDP-STSILSLIS 555
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 217/417 (52%), Gaps = 2/417 (0%)
Query: 156 FKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLS 215
F+ Y +++ S + + F+ M +G +P S + ++ + + + +
Sbjct: 94 FRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN 153
Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
+ +V + + + L+ + +++ + E P+ + LI G + G
Sbjct: 154 E-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
E++KA + F++MG G + TY LI+GL + +G E+ ++++ F P++ TY
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF-PNLYTY 271
Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
V++ CK G+ A +++EM G+ + VT+N LI G + + A + ++M S
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
G P+++T+++LIDG+C G+L + L LC ++K + LSP++ T+ IL++ C++ +
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
A + +K+++ + P Y +ID F ++ N+++A + MEE PD T+++LI
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
G C+KG+M EA +F M+ C P+++ N++I K G A ++++ E +
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 198/371 (53%), Gaps = 1/371 (0%)
Query: 197 FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLY 256
+ C AG+ + + LL + + + +Y +L++ K+ ++A +F E +L
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 257 SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGH 316
+ T+ +LI GL + G K+ FE + M G P++ TYN +++ LC+
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 317 ELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDG 376
++ E++ + S ++VTY ++I G C+ K+++A + ++M S GI P+ +T+N LIDG
Sbjct: 289 QVFDEMRERG-VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 377 FGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPN 436
F VG + A + + S G P +VT++ L+ G+CR G + K+ EM+ + + P+
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 437 VYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVA 496
T+TILI+ + + + A + ++ LVP Y+ +I GFC G ++EA+ +
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 497 EMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGG 556
M EK C+P++V + +I+G+C +G A+ + +M AP+ + +I L K
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527
Query: 557 MPNEAFRIMQR 567
EA R++++
Sbjct: 528 KSKEAERLVEK 538
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 166/322 (51%), Gaps = 3/322 (0%)
Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
F E ++ L N +TY +++ L + G+ +++ M+ DG PN ++
Sbjct: 221 FFEMGKLGLVANE--RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
+ G+ A + + R V+ + YN+L+ L ++ +EA + + P+
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
T+N LI G +G++ KA D+ S G SP +VTYN L+SG CR + + +++KE
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
++ + P VTYT +I + + M+KA + M G+ P T++VLI GF G
Sbjct: 399 MEERG-IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
M A + + M+ P+ V ++++I GYC+ G + LKL EM+ K L+PNV ++
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Query: 442 ILINALCKENRLNDARRFLKQL 463
+I LCKE + +A R ++++
Sbjct: 518 YMIEVLCKERKSKEAERLVEKM 539
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 211/419 (50%), Gaps = 11/419 (2%)
Query: 155 SFKTYNLVMRSLCEMGL-----HDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKC 207
+F NL R GL D+V + D ++S P +I+F S+ + +
Sbjct: 48 TFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSR---PLPTVIDFNRLFSAIAKTKQY 104
Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
+ L Q + S + + ++N + A + +L +PDT FN L
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
+ GL V +A E M G P ++T NTL++GLC +V+ L+ + ++
Sbjct: 165 LNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM-VETG 223
Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
F P+ VTY V++ CK G+ A + +M IK AV ++++IDG K G++ +A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
+ M G+ D++T+++LI G+C G+ + G KL +M + +SPNV TF++LI++
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF 343
Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
KE +L +A + LK++ + P YN +IDGFCK ++EA +V M K C PD
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
+TF ILI G+C R+ + + +F +M G + +T N+L+ + G A ++ Q
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 162/304 (53%), Gaps = 1/304 (0%)
Query: 230 NSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGS 289
N+L+N L +AV + QP+ T+ ++ + + G+ A E M
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 290 FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
D V Y+ +I GLC+ + L E++ K F D++TY ++I G+C G+ D
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAGRWD 315
Query: 350 KATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLI 409
+ +M I P+ VTF+VLID F K G + A+ + + M+ G P+ +T++SLI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 410 DGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
DG+C+ +L + +++ D M K P++ TF ILIN CK NR++D +++ ++
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
YN ++ GFC++G ++ A + EM +R +PD V++ IL+ G C G + +A+ I
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 530 FNKM 533
F K+
Sbjct: 496 FGKI 499
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 216/419 (51%), Gaps = 13/419 (3%)
Query: 159 YNLVMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ- 216
+N ++ LC E + +++++V D M GH P + V+ GK A L+ +
Sbjct: 161 FNTLLNGLCLECRVSEALELV-DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 217 ----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
F+P EVT Y +LN + K A+ + ++ + D ++I+I GL
Sbjct: 220 VETGFQPNEVT-----YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
+ G + AF F +M G DI+TYNTLI G C G +LL+++ K + SP+V
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM-IKRKISPNV 333
Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
VT++ +I + K GK+ +A + EM GI P+ +T+N LIDGF K + A M +
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
M+S G PD++TF+ LI+GYC+ +++ GL+L EM + + N T+ L+ C+ +
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
L A++ +++ + P Y ++DG C G +++A I ++E+ + + D + I
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
+I G C ++ +A +F + G D N +IS L + ++A + ++ +E+
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 190/392 (48%), Gaps = 1/392 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T N ++ LC G V+ D M G PN ++ ++G+ A LL +
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ + Y+ +++ L K + D A +F E + D T+N LI G G
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+ DM SP++VT++ LI + ++ +LLKE+ + +P+ +TY S
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM-MQRGIAPNTITYNS 373
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I G+CK ++++A + + M S G P +TFN+LI+G+ K + + M G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
+ + VT+++L+ G+C++G+L KL EM + + P++ ++ IL++ LC L A
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+++ + + +Y +I G C A VD+A + + K K D + I+I
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL 553
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
C K + +A +F KM G APD++T N LI
Sbjct: 554 CRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 197/405 (48%), Gaps = 2/405 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TY V+ +C+ G + M ++ + + G D A L ++
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
YN+L+ D+ + ++ + P+ TF++LI + G++
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
++A + +M G +P+ +TYN+LI G C+ N + +++ ++ PD++T+
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDIMTFNI 408
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I+GYCK ++D ++ EM+ G+ + VT+N L+ GF + G + A+ + + M+S
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
PD+V++ L+DG C NG+L + L++ +++ + ++ + I+I+ +C ++++DA
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
L + YN +I C+ ++ +A+++ +M E+ PD++T+ ILI H
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
A + +M G P D++ ++ +L G +++F
Sbjct: 589 LGDDDATTAAELIEEMKSSG-FPADVSTVKMVINMLSSGELDKSF 632
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 99/185 (53%), Gaps = 1/185 (0%)
Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
LP V+ F+ L + Q L LC +M+ K ++ ++YT +I+IN C+ +L+ A
Sbjct: 85 LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFS 144
Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
+ ++ P ++N +++G C V EA +V M E KP +T L+ G C
Sbjct: 145 TMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC 204
Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPS 578
+ G++ +A+ + ++M+ G P+++T +++ + K G A ++ R E++N++L +
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL-RKMEERNIKLDA 263
Query: 579 WKKAV 583
K ++
Sbjct: 264 VKYSI 268
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 35/276 (12%)
Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
S FS ++Y +S K D A ++ +M P+ + FN L K
Sbjct: 47 STFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYEL 106
Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
+ ++M S G + T S +I+ +CR +L+ ++ P+ F L+N
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166
Query: 446 ALCKENRLNDARRFLKQL-----------------------KWNDLV------------P 470
LC E R+++A + ++ K +D V P
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
Y PV++ CK+G A ++ +MEE+ K D V ++I+I G C G + A ++F
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
N+M G D IT N+LI G ++ ++++
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 51/119 (42%)
Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
+ +DA + + + +P +N + K + + +ME K T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
I+I C ++ A S K++++G PD + N+L++ L +EA ++ R E
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 182/334 (54%), Gaps = 1/334 (0%)
Query: 231 SLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSF 290
S+LN LV++ D ++ PD + +L Q + G K + +M S
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 291 GCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDK 350
G P++ Y I LCR N++ ++ + +K K P++ TY+++I GYCK G + +
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK-KHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 351 ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLID 410
A G+Y E+ + P+ V F L+DGF K +V+A + M+ FG P++ ++ LI
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 411 GYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
G+C++G + + + L EM+ NLSP+V+T+TILIN LC E+++ +A R +++K + P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
YN +I G+CK N+++A + +EM +P+ +TF+ LI G+C + A+ ++
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 531 NKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
+M G PD +T +LI K EA R+
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 197/392 (50%), Gaps = 2/392 (0%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
Y + + LC + + +F+ M+ G LPN + + G A GL +
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL 296
Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVK 278
E+ + ++ +L++ K A +F + P+ + +N LI G + G +
Sbjct: 297 VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNML 356
Query: 279 KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSV 338
+A +M S SPD+ TY LI+GLC ++VA + L +++K + F P TY S+
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF-PSSATYNSL 415
Query: 339 ISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGY 398
I GYCK M++A + +EM + G++P+ +TF+ LIDG+ V ++ +A + M G
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
+PDVVT+++LID + + + + L+L +M + PN +TF L++ KE RL+ A
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
F ++ + +I+G C+ G + A+ ++M PD ++ ++ GH
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHL 595
Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
+ R+ + + + M++ G P ++ VN L++
Sbjct: 596 QEKRITDTMMLQCDMIKTGILP-NLLVNQLLA 626
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 210/440 (47%), Gaps = 9/440 (2%)
Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
LS LN L +R D+ + + + ++ L Y ++ + + GL+ + + D
Sbjct: 168 LSILNGLVRRRRFDSVWVDYQLM----ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLD 223
Query: 181 YMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQN 240
M S G PN + ++ R K + A+ + + V + + Y+++++ K
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 241 NADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYN 300
N +A ++KE P+ F L+ G + E+ A F M FG P++ YN
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNS 360
LI G C+ + LL E++ SPDV TYT +I+G C ++ +A ++ +M +
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEME-SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402
Query: 361 CGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQ 420
I PS+ T+N LI G+ K NM A + M + G P+++TFS+LIDGYC +
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462
Query: 421 GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVID 480
+ L EM K + P+V T+T LI+A KE + +A R + + P + ++D
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Query: 481 GFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAP 540
GF K G + A E ++R + V FT LI G C G ++ A F+ M G P
Sbjct: 523 GFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582
Query: 541 DDITVNSLISCLLKGGMPNE 560
D + S +S +LKG + +
Sbjct: 583 D---ICSYVS-MLKGHLQEK 598
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 161/374 (43%), Gaps = 63/374 (16%)
Query: 235 ALVKQNNADEAVYMFK----------------------------------------EYFR 254
A++K +A+EA +F+ E +
Sbjct: 47 AILKCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLK 106
Query: 255 LYSQPDTWT---FNIL--IQGLS-RIGEVKKAFEFFYDMGSF----------GCSPDIVT 298
+S+P + FN L IQ IG F +MG F CSPD
Sbjct: 107 RHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKA 166
Query: 299 YNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
++++GL R + V ++L+ PDV Y + K G K +
Sbjct: 167 CLSILNGLVRRRRFDSVWVDYQLM----ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLL 222
Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRN 415
+EM S GIKP+ + + I + M AE M E M G LP++ T+S++IDGYC+
Sbjct: 223 DEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKT 282
Query: 416 GQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMY 475
G + Q L E+ L PNV F L++ CK L AR + + P ++Y
Sbjct: 283 GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVY 342
Query: 476 NPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLR 535
N +I G CK+GN+ EA +++EME PD T+TILI G C++ ++ EA +F KM
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402
Query: 536 IGCAPDDITVNSLI 549
P T NSLI
Sbjct: 403 ERIFPSSATYNSLI 416
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 128/321 (39%), Gaps = 34/321 (10%)
Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
V ++ + YN ++ C+ G + M S P+ ++ +
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
A L + + + S+ YNSL++ K+ N ++A+ + E +P+ TF+ L
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISG---------------------- 305
I G + ++K A +++M G PD+VTY LI
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 306 -------LCRVNEVARGHELLKEVKFKSEFSP-----DVVTYTSVISGYCKLGKMDKATG 353
C V+ + L + F E + + V +T +I G C+ G + +A+
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570
Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
+++M SCGI P ++ ++ G + + ++ M+ G LP+++ L Y
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQ 630
Query: 414 RNGQLNQGLKLCDEMKGKNLS 434
NG + L + + K +S
Sbjct: 631 ANGYVKSACFLTNSSRLKTVS 651
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 215/462 (46%), Gaps = 46/462 (9%)
Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
L ++H+ TYN+++ C + M G+ P+ + ++ +
Sbjct: 39 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 98
Query: 210 AKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
A L+ Q +RP +T +T L++ L N A EAV + + QP+ T+
Sbjct: 99 AVALVDQMVEMGYRPDTITFTT-----LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 153
Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
+++ GL + G++ AF M + D+V +NT+I LC+ V L KE++
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
K P+VVTY+S+IS C G+ A+ + ++M I P+ VTFN LID F K G V
Sbjct: 214 KG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
AE + + M+ PD+ T++SLI+G+C + +L++ ++ + M K+ P++ T+ LI
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
CK R+ D +++ LV Y +I G G+ D A + +M
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRI---------------------------- 536
PD +T++IL+ G C G++ +A+ +F+ M +
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 537 -------GCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
G P+ +T N++IS L + EA+ ++++ ED
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 203/418 (48%), Gaps = 14/418 (3%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-- 216
+N ++ ++ +M D V + + M+ G N ++ R + A LL +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
+ P VT+S SLLN +AV + + + +PDT TF LI GL
Sbjct: 73 KLGYEPSIVTLS-----SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
+ +A M GC P++VTY +++GLC+ ++ LL +++ ++ DVV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME-AAKIEADVV 186
Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
+ ++I CK +D A ++ EM + GI+P+ VT++ LI G A + M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
+ P++VTF++LID + + G+ + KL D+M +++ P+++T+ LIN C +RL
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
+ A++ + + D P YN +I GFCK+ V++ + EM + D VT+T L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQRA 568
I G G A +F +M+ G PD +T + L+ L G E F MQ++
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 186/379 (49%), Gaps = 1/379 (0%)
Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
+ D M G PN V+ + G D A LL++ ++ ++N+++++L
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
K + D+A+ +FKE +P+ T++ LI L G A + DM +P++V
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
T+N LI + + +L ++ K PD+ TY S+I+G+C ++DKA ++
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDM-IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
M S P T+N LI GF K + + M G + D VT+++LI G +G
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
+ K+ +M + P++ T++IL++ LC +L A ++ +++ ++Y
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
+I+G CKAG VD+ + + K KP+ VT+ +I G C K + EA ++ KM G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 538 CAPDDITVNSLISCLLKGG 556
PD T N+LI L+ G
Sbjct: 496 PLPDSGTYNTLIRAHLRDG 514
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 184/385 (47%), Gaps = 3/385 (0%)
Query: 189 PNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAV 246
P + EF +S+ + K D L + + ++ + + YN L+N +++ A+
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 247 YMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
+ + +L +P T + L+ G + A M G PD +T+ TLI GL
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 307 CRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPS 366
N+ + L+ + + P++VTY V++G CK G +D A + N+M + I+
Sbjct: 126 FLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 367 AVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCD 426
V FN +ID K ++ A + + M + G P+VVT+SSLI C G+ + +L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 427 EMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAG 486
+M K ++PN+ TF LI+A KE + +A + + + P F YN +I+GFC
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 487 NVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
+D+A + M K C PD T+ LI G C R+ + +F +M G D +T
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 547 SLISCLLKGGMPNEAFRIMQRASED 571
+LI L G + A ++ ++ D
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSD 389
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 128/248 (51%)
Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
KS P + + ++S K+ K D + +M GI + T+N+LI+ F + +
Sbjct: 3 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
A + +M+ GY P +VT SSL++GYC +++ + L D+M P+ TFT LI
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
+ L N+ ++A + ++ P Y V++G CK G++D A ++ +ME + +
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
D V F +I C + +A+++F +M G P+ +T +SLISCL G ++A ++
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 565 MQRASEDQ 572
+ E +
Sbjct: 243 LSDMIEKK 250
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 204/424 (48%), Gaps = 2/424 (0%)
Query: 149 NLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCD 208
NL ++H+ TY++ + C + M G+ P+ + ++ +
Sbjct: 103 NLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 162
Query: 209 AAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI 268
A L+ Q T + +L++ L + N A EAV + + QPD T+ +I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 269 QGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEF 328
GL + GE A M D+V YNT+I GLC+ + +L +++ K
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG-I 281
Query: 329 SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
PDV TY +IS C G+ A+ + ++M I P V FN LID F K G +V AE
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 389 MRERMLSFGY-LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
+ + M+ + PDVV +++LI G+C+ ++ +G+++ EM + L N T+T LI+
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
+ ++A+ KQ+ + + P YN ++DG C GNV+ A V+ M+++ K D
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
VT+T +I C G++ + +F + G P+ +T +++S + G+ EA +
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 568 ASED 571
ED
Sbjct: 522 MKED 525
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 198/408 (48%), Gaps = 1/408 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+ ++ L + + + M G P+ ++ + G+ D A LL++
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
G++ +YN++++ L K + D+A +F + +PD +T+N LI L G
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
A DM +PD+V +N LI + ++ +L E+ PDVV Y +
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I G+CK ++++ ++ EM+ G+ + VT+ LI GF + + +A+ + ++M+S G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
PD++T++ L+DG C NG + L + + M+ +++ ++ T+T +I ALCK ++ D
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
L + P Y ++ GFC+ G +EA+ + EM+E P+ T+ LI
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
G + + +M G A D T L++ +L G +++F M
Sbjct: 542 LRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSFLDM 588
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 169/345 (48%), Gaps = 2/345 (0%)
Query: 206 KCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFN 265
K D A GL S ++ LL+A+ K N D + + ++ L + +T++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 266 ILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFK 325
I I R ++ A M G P IVT N+L++G C N ++ L+ ++ +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM-VE 173
Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
+ PD VT+T+++ G + K +A + M G +P VT+ +I+G K G
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
A + +M DVV ++++IDG C+ ++ L ++M+ K + P+V+T+ LI+
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM-EEKRCK 504
LC R +DA R L + ++ P +N +ID F K G + EA + EM + K C
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
PD V + LI G C R+ E + +F +M + G + +T +LI
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 170/329 (51%), Gaps = 2/329 (0%)
Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTL 302
D+A+ +F + + P F+ L+ ++++ + M + G S ++ TY+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 303 ISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
I+ CR ++++ +L ++ K + P +VT S+++G+C ++ +A + ++M G
Sbjct: 117 INYFCRRSQLSLALAILGKM-MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
+P VTF L+ G + A + ERM+ G PD+VT+ ++I+G C+ G+ + L
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
L ++M+ + +V + +I+ LCK ++DA +++ + P F YNP+I
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI-GCAPD 541
C G +A+ ++++M EK PD V F LI +G++VEA ++++M++ C PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 542 DITVNSLISCLLKGGMPNEAFRIMQRASE 570
+ N+LI K E + + S+
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 214/439 (48%), Gaps = 27/439 (6%)
Query: 156 FKTYNLVMRSLC------EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
+ YN+++ S+C L D + + M + G + N + F AGK +
Sbjct: 407 YVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEK 466
Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
A ++ + T Y+ +LN L + + A +F+E R D +T+ I++
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
+ G +++A ++F +M GC+P++VTY LI + +V+ +EL E
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEGCL 585
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIK------------------PSAVTFN 371
P++VTY+++I G+CK G+++KA I+ M CG K P+ VT+
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 372 VLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGK 431
L+DGF K + A + + M G P+ + + +LIDG C+ G+L++ ++ EM
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 432 NLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEA 491
+YT++ LI+ K R + A + L ++ N P +Y +IDG CK G DEA
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 492 NVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISC 551
++ MEEK C+P+ VT+T +I G M G++ + + +M G AP+ +T LI
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDH 823
Query: 552 LLKGGMPNEAFRIMQRASE 570
K G + A +++ +
Sbjct: 824 CCKNGALDVAHNLLEEMKQ 842
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 200/488 (40%), Gaps = 96/488 (19%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
Y ++ LCE L + + MR+ LPN + C+ + K +L+
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILI---------- 268
S ++NSL++A + A + K+ + P +NILI
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 269 -------------------------------QGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
+ L G+ +KAF +M G PD
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
TY+ +++ LC +++ L +E+K + DV TYT ++ +CK G +++A +NE
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
M G P+ VT+ LI + K + A + E MLS G LP++VT+S+LIDG+C+ GQ
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
+ + ++ + M G P D + KQ N P Y
Sbjct: 604 VEKACQIFERMCGSKDVP-------------------DVDMYFKQYDDNSERPNVVTYGA 644
Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS--------- 528
++DGFCK+ V+EA ++ M + C+P+++ + LI G C G++ EA
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 529 --------------------------IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
+ +KML CAP+ + +I L K G +EA+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 563 RIMQRASE 570
++MQ E
Sbjct: 765 KLMQMMEE 772
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 207/488 (42%), Gaps = 86/488 (17%)
Query: 137 KLGLKFLEFSRVNLS-LNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIE 195
K+ L FL F + L TY +++ S C+ GL + + F+ MR G PN
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 196 FFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKE---- 251
+ + ++A K A L + Y++L++ K ++A +F+
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 252 --------YFRLY----SQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
YF+ Y +P+ T+ L+ G + V++A + M GC P+ + Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 300 NTLISGLCRVNEVARGHELLKEVK----------------------------------FK 325
+ LI GLC+V ++ E+ E+ +
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 326 SEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVS 385
+ +P+VV YT +I G CK+GK D+A + M G +P+ VT+ +IDGFG +G + +
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 797
Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN-------------------------- 419
+ ERM S G P+ VT+ LID C+NG L+
Sbjct: 798 CLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE 857
Query: 420 -------QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW--NDLVP 470
+ L L DE+ + +P + + +LI+ L K RL A R L+++ LV
Sbjct: 858 GFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917
Query: 471 KPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIF 530
YN +I+ C A V+ A + +EM +K P+ +F LI G ++ EA+ +
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Query: 531 NKMLRIGC 538
+ + + C
Sbjct: 978 DFISHMVC 985
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 208/495 (42%), Gaps = 47/495 (9%)
Query: 115 RYLCEKLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDS 174
R EKLS +EV++ + P + F ++ + H+ YN +L ++ + D
Sbjct: 124 RQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYN----ALVDLIVRDD 179
Query: 175 VQVV----FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYN 230
+ V +R D + V R G A L + + S YN
Sbjct: 180 DEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYN 239
Query: 231 SLLNALVKQNNADEAVYMFKEY-----------FRLYSQ--------------------- 258
L+ A +K + D A + +E R ++
Sbjct: 240 CLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV 299
Query: 259 PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHEL 318
PDT + LI GL ++A +F M + C P++VTY+TL+ G ++ R +
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 319 LKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
L + + + P + S++ YC G A + +M CG P V +N+LI
Sbjct: 360 LNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Query: 379 KVGNMVS------AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKN 432
+ ++ AE ML+ G + + + SS C G+ + + EM G+
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 433 LSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEAN 492
P+ T++ ++N LC +++ A +++K LV + Y ++D FCKAG +++A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
EM E C P+ VT+T LI + ++ A +F ML GC P+ +T ++LI
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 553 LKGGMPNEAFRIMQR 567
K G +A +I +R
Sbjct: 599 CKAGQVEKACQIFER 613
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/537 (25%), Positives = 259/537 (48%), Gaps = 26/537 (4%)
Query: 55 PSRVRASTIAAIAHFHGLANGGSRPFDEKEVNYRCSNEFWFVKVVCTLLL-RSSYLSDTC 113
P +R+ T + HF S D + R + + FV V ++ + S+
Sbjct: 4 PCTIRSITSS---HFRNSFRNVSSVIDSAQEECRIAEDKQFVDAVKRIVRGKRSWEIALS 60
Query: 114 ARYLCEKLSPLNSLEV-IKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGL- 171
+ + +L ++ E+ I +D+PKLGL+F F ++ +HS ++ +++ +L + L
Sbjct: 61 SELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLF 120
Query: 172 -----------------HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC-DAAKGL 213
D V+F L +S + + +R+ + D
Sbjct: 121 WPASSLLQTLLLRALKPSDVFNVLFSCYEK-CKLSSSSSFDLLIQHYVRSRRVLDGVLVF 179
Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
+ ++LL+ LVK + A+ +F + + +PD + + +I+ L
Sbjct: 180 KMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCE 239
Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
+ ++ +A E M + GC +IV YN LI GLC+ +V + K++ K + PDVV
Sbjct: 240 LKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK-DLKPDVV 298
Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
TY +++ G CK+ + + + +EM PS + L++G K G + A + +R+
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
+ FG P++ +++LID C+ + ++ L D M L PN T++ILI+ C+ +L
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
+ A FL ++ L + YN +I+G CK G++ A +AEM K+ +P VT+T L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
+ G+C KG++ +A+ ++++M G AP T +L+S L + G+ +A ++ +E
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 207/420 (49%), Gaps = 3/420 (0%)
Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
V++ + Y V+RSLCE+ + + +M + G N + + K
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
A G+ ++ Y +L+ L K + + M E L P + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
++GL + G++++A + FG SP++ YN LI LC+ + ELL + K
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-ELLFDRMGKIG 397
Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
P+ VTY+ +I +C+ GK+D A EM G+K S +N LI+G K G++ +AE
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
M++ P VVT++SL+ GYC G++N+ L+L EM GK ++P++YTFT L++ L
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 448 CKENRLNDARRFLKQL-KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
+ + DA + ++ +WN + P YN +I+G+C+ G++ +A + EM EK PD
Sbjct: 518 FRAGLIRDAVKLFNEMAEWN-VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
++ LI G C+ G+ EA + + + C ++I L+ + G EA + Q
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 193/426 (45%), Gaps = 7/426 (1%)
Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
V+ ++ + YN ++ SLC+ +++FD M G PN + R GK
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
D A L + + +S + YNSL+N K + A E +P T+ L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
+ G G++ KA +++M G +P I T+ TL+SGL R + +L E+ +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWN 537
Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
P+ VTY +I GYC+ G M KA EM GI P ++ LI G G A+
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
+ + + + ++ L+ G+CR G+L + L +C EM + + ++ + +LI+
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
K LK++ L P +Y +ID K G+ EA I M + C P++
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
VT+T +I G C G + EA + +KM + P+ +T + L KG + MQ+
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVD------MQK 771
Query: 568 ASEDQN 573
A E N
Sbjct: 772 AVELHN 777
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 170/339 (50%), Gaps = 6/339 (1%)
Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
+F P E +S SL+ L K+ +EA+ + K P+ + +N LI L +
Sbjct: 327 RFSPSEAAVS-----SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
+ +A F MG G P+ VTY+ LI CR ++ L E+ + V Y
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM-VDTGLKLSVYPY 440
Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
S+I+G+CK G + A G EM + ++P+ VT+ L+ G+ G + A + M
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
G P + TF++L+ G R G + +KL +EM N+ PN T+ ++I C+E ++
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
A FLK++ +VP + Y P+I G C G EA V V + + C+ +++ +T L+
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
G C +G++ EA+S+ +M++ G D + LI LK
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 202/473 (42%), Gaps = 71/473 (15%)
Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
V+ L S YN ++ C+ G + + M + P + GK
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
+ A L + + S + + +LL+ L + +AV +F E +P+ T+N++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
I+G G++ KAFEF +M G PD +Y LI GLC + + + + K
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH-KGN 607
Query: 328 FSPDVVTYTSVISGYCKLGKMDKAT----------------------------------- 352
+ + YT ++ G+C+ GK+++A
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
G+ EM+ G+KP V + +ID K G+ A + + M++ G +P+ VT++++I+G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 413 CRNGQLNQGLKLCDEM--------------------KG---------------KNLSPNV 437
C+ G +N+ LC +M KG K L N
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 438 YTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAE 497
T+ +LI C++ R+ +A + ++ + + P Y +I+ C+ +V +A +
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 498 MEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
M EK +PD+V + LI G C+ G M +A + N+MLR G P++ T + S
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 215/465 (46%), Gaps = 46/465 (9%)
Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
L ++H+ TYN+++ C + M G+ P+ + ++ +
Sbjct: 114 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 210 AKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
A L+ Q +RP +T +T L++ L N A EAV + + QP+ T+
Sbjct: 174 AVALVDQMVEMGYRPDTITFTT-----LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
+++ GL + G++ AF M + ++V Y+T+I LC+ L E++
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
K P+V+TY+S+IS C + A+ + ++M I P+ VTFN LID F K G +V
Sbjct: 289 KG-VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
AE + + M+ PD+ T+SSLI+G+C + +L++ + + M K+ PNV T+ LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 445 NALCKENRLNDARRFLKQLKWNDLV----------------------------------- 469
N CK R+++ +++ LV
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
P YN ++DG CK G +++A V+ ++ + +P T+ I+I G C G++ + +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNL 574
F + G PD I N++IS + G+ EA + ++ ED L
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 208/418 (49%), Gaps = 14/418 (3%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-- 216
+N ++ ++ +M D V + + M+ G N ++ R + A LL +
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 217 ---FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
+ P VT+S SLLN +AV + + + +PDT TF LI GL
Sbjct: 148 KLGYEPSIVTLS-----SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
+ +A M GC P++VTY +++GLC+ ++ LL +++ ++ +VV
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME-AAKIEANVV 261
Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
Y++VI CK D A ++ EM + G++P+ +T++ LI A + M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
+ P+VVTF++LID + + G+L + KL DEM +++ P+++T++ LIN C +RL
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
++A+ + + D P YN +I+GFCKA +DE + EM ++ + VT+T L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRA 568
I G A +F +M+ G P+ +T N+L+ L K G +A F +QR+
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 184/369 (49%), Gaps = 1/369 (0%)
Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
+ + K D A GL S F +N LL+A+ K D + + ++ RL +
Sbjct: 61 LHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL 120
Query: 262 WTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKE 321
+T+NILI R ++ A M G P IVT ++L++G C ++ L+ +
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 322 VKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVG 381
+ + + PD +T+T++I G K +A + + M G +P+ VT+ V+++G K G
Sbjct: 181 M-VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 382 NMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFT 441
++ A + +M + +VV +S++ID C+ + L L EM+ K + PNV T++
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 442 ILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEK 501
LI+ LC R +DA R L + + P +N +ID F K G + EA + EM ++
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 502 RCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
PD T++ LI G CM R+ EA +F M+ C P+ +T N+LI+ K +E
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 562 FRIMQRASE 570
+ + S+
Sbjct: 420 VELFREMSQ 428
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 329 SPDVVTYTSVISGYCKLGK-MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
+P + + + G C G+ +G Y E+ G+ L D G G MV +
Sbjct: 26 NPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMK-----LDDAIGLFGGMVKSR 80
Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
LP + F+ L+ + + + + L ++M+ +S N+YT+ ILIN
Sbjct: 81 P----------LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCF 130
Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
C+ ++++ A L ++ P + +++G+C + +A +V +M E +PD
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
+TFT LI G + + EA+++ ++M++ GC P+ +T +++ L K G + AF ++ +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%)
Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
FS Y ++ K+D A G++ M PS FN L+ K+
Sbjct: 46 FSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVI 105
Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
+ E+M G ++ T++ LI+ +CR Q++ L L +M P++ T + L+N
Sbjct: 106 SLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY 165
Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
C R++DA + Q+ P + +I G EA +V M ++ C+P+
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
VT+ +++ G C +G + A ++ NKM + + +++I L K ++A +
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 46/106 (43%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++ LC+ G + VVF+Y++ P + +AGK + L
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWT 263
V +YN++++ ++ +EA +F++ PD+ T
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 173/344 (50%), Gaps = 36/344 (10%)
Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
+T +++L+N L + EA+ + + +PD T N L+ GL G+ +A
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
M +GC P+ VTY +++ +C+ + A ELL++++ ++ D V Y+ +I G CK
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN-IKLDAVKYSIIIDGLCK 275
Query: 345 LGKMDKATGIYNEMNSCGI-----------------------------------KPSAVT 369
G +D A ++NEM GI P+ VT
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
F+VLID F K G + AE + + M+ G PD +T++SLIDG+C+ L++ ++ D M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
K PN+ TF ILIN CK NR++D +++ +V YN +I GFC+ G ++
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
A + EM ++ P+ VT+ IL+ G C G +A+ IF K+
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 213/428 (49%), Gaps = 14/428 (3%)
Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVS 199
F FS NLS ++ L ++ D++ + D + S P +I+F S
Sbjct: 46 FSAFSDRNLSYRERLRS------GLVDIKADDAIDLFRDMIHSR---PLPTVIDFSRLFS 96
Query: 200 SCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQP 259
+ + + D L Q + + + + ++N + A + +L +P
Sbjct: 97 AIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP 156
Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
+T TF+ LI GL G V +A E M G PD++T NTL++GLC + A L+
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 320 -KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG 378
K V++ + P+ VTY V++ CK G+ A + +M IK AV ++++IDG
Sbjct: 217 DKMVEYGCQ--PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 379 KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVY 438
K G++ +A + M G +++T++ LI G+C G+ + G KL +M + ++PNV
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 439 TFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEM 498
TF++LI++ KE +L +A K++ + P Y +IDGFCK ++D+AN +V M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 499 EEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMP 558
K C P+ TF ILI G+C R+ + + +F KM G D +T N+LI + G
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 559 NEAFRIMQ 566
N A + Q
Sbjct: 455 NVAKELFQ 462
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 200/409 (48%), Gaps = 1/409 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T N ++ LC G ++ D M G PN+ ++ ++G+ A LL +
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ + Y+ +++ L K + D A +F E + T+NILI G G
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+ DM +P++VT++ LI + ++ EL KE+ + +PD +TYTS
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYTS 373
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I G+CK +DKA + + M S G P+ TFN+LI+G+ K + + +M G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
+ D VT+++LI G+C G+LN +L EM + + PN+ T+ IL++ LC A
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
++++ + + +YN +I G C A VD+A + + K KP T+ I+I G
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
C KG + EA +F KM G APD T N LI L G ++ ++++
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 197/398 (49%), Gaps = 1/398 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TY V+ +C+ G + M ++ + + G D A L ++
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+T + YN L+ D+ + ++ + P+ TF++LI + G++
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
++A E +M G +PD +TY +LI G C+ N + + ++++ ++ P++ T+
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFNI 408
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I+GYCK ++D ++ +M+ G+ VT+N LI GF ++G + A+ + + M+S
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
P++VT+ L+DG C NG+ + L++ ++++ + ++ + I+I+ +C ++++DA
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
L + P YN +I G CK G + EA ++ +MEE PD T+ ILI H
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKG 555
G +++ + ++ R G + D T+ +I L G
Sbjct: 589 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 35/172 (20%)
Query: 399 LPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARR 458
LP V+ FS L + Q + L LC +M+ K ++ N+YT +I+IN C+ +L A
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA-- 142
Query: 459 FLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHC 518
F G + + +P+ +TF+ LI G C
Sbjct: 143 -----------------------FSAMGKIIKLGY----------EPNTITFSTLINGLC 169
Query: 519 MKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
++GR+ EA+ + ++M+ +G PD IT+N+L++ L G EA ++ + E
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 36/125 (28%)
Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
KTYN+++ LC+ G +++F M DGH P+
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG------------------------- 578
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
+ YN L+ A + +A ++V + +E R D T ++I LS G
Sbjct: 579 ----------WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GR 627
Query: 277 VKKAF 281
+KK+F
Sbjct: 628 LKKSF 632
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 224/456 (49%), Gaps = 20/456 (4%)
Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
N + +K L S+ LSL S TYN +++ C+ G D+ + + M S G N
Sbjct: 395 NKAIEIKDLMVSK-GLSLTSS--TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451
Query: 195 EFFVSSCIRAGKCDAA-----KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF 249
+ D+A + LL PG ++T L++ L K +A+ ++
Sbjct: 452 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT-----LISGLCKHGKHSKALELW 506
Query: 250 KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRV 309
++ DT T N L+ GL G++ +AF ++ GC D V+YNTLISG C
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566
Query: 310 NEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVT 369
++ L E+ K PD TY+ +I G + K+++A +++ G+ P T
Sbjct: 567 KKLDEAFMFLDEM-VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 625
Query: 370 FNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMK 429
++V+IDG K + + M+S P+ V ++ LI YCR+G+L+ L+L ++MK
Sbjct: 626 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 685
Query: 430 GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVD 489
K +SPN T+T LI + +R+ +A+ ++++ L P F Y +IDG+ K G +
Sbjct: 686 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 745
Query: 490 EANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLI 549
+ ++ EM K P+K+T+T++I G+ G + EA + N+M G PD IT I
Sbjct: 746 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 805
Query: 550 SCLLKGGMPNEAFRIMQRASEDQNLQ--LPSWKKAV 583
LK G EAF + S+++N + W K +
Sbjct: 806 YGYLKQGGVLEAF----KGSDEENYAAIIEGWNKLI 837
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 191/390 (48%), Gaps = 10/390 (2%)
Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGK----CDAAKGLLSQFRPGEVTMSTFMYNSLL 233
VF + + G P+ ++S +RA + C+A + P +++ + +
Sbjct: 226 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSP-----DVYLFTTAI 280
Query: 234 NALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCS 293
NA K +EAV +F + P+ TFN +I GL G +AF F M G
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340
Query: 294 PDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATG 353
P ++TY+ L+ GL R + + +LKE+ K F P+V+ Y ++I + + G ++KA
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMT-KKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399
Query: 354 IYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
I + M S G+ ++ T+N LI G+ K G +AE + + MLS G+ + +F+S+I C
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
+ + L+ EM +N+SP T LI+ LCK + + A Q V
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTR 519
Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKM 533
N ++ G C+AG +DEA I E+ + C D+V++ LI G C K ++ EA ++M
Sbjct: 520 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 579
Query: 534 LRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
++ G PD+ T + LI L EA +
Sbjct: 580 VKRGLKPDNYTYSILICGLFNMNKVEEAIQ 609
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 117/237 (49%), Gaps = 14/237 (5%)
Query: 338 VISGYCKLGKMDK---ATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
+I YC K D A ++ + + G+ PS T N+L+ ++V A ++
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLT------SLVRANEFQKCCE 260
Query: 395 SF-----GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
+F G PDV F++ I+ +C+ G++ + +KL +M+ ++PNV TF +I+ L
Sbjct: 261 AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 320
Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
R ++A F +++ + P Y+ ++ G +A + +A ++ EM +K P+ +
Sbjct: 321 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 380
Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
+ LI G + +AI I + M+ G + T N+LI K G + A R+++
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 437
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 408 LIDGYCRNGQLNQ---GLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
LI+ YC + + L + + K + P+ T IL+ +L + N F K +
Sbjct: 207 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE------FQKCCE 260
Query: 465 WNDLV-----PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCM 519
D+V P +++ I+ FCK G V+EA + ++MEE P+ VTF +I G M
Sbjct: 261 AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 320
Query: 520 KGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
GR EA KM+ G P IT + L+ L + +A+ +++ ++
Sbjct: 321 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 371
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 199/396 (50%), Gaps = 1/396 (0%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
S +TY +++++LC+ GL D +FD M G PN + R GK + A G+
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRI 274
+ + S YN+L+N K A + + +P+ TFN L++GL R+
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 275 GEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVT 334
G+ KA M G SPDIV+YN LI GLCR + ++LL + + PD +T
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC-FDIEPDCLT 478
Query: 335 YTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERML 394
+T++I+ +CK GK D A+ M GI VT LIDG KVG A ++ E ++
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 395 SFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLN 454
L + + ++D + ++ + L + ++ L P+V T+T L++ L + +
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 455 DARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILI 514
+ R L+ +K + +P + Y +I+G C+ G V+EA +++ M++ P+ VT+T+++
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658
Query: 515 IGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLIS 550
G+ G++ A+ M+ G +D +SL+
Sbjct: 659 KGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 206/414 (49%), Gaps = 2/414 (0%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
++ Y+ ++ SL ++ L V + M +DG + V++ + G +AA+ +
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 215 SQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR-LYSQPDTWTFNILIQGLSR 273
S+ + + + SLL + N +A+ +F + + P++ +++ILI GL
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
+G +++AF MG GC P TY LI LC + + L E+ P+V
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM-IPRGCKPNVH 337
Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
TYT +I G C+ GK+++A G+ +M I PS +T+N LI+G+ K G +V A + M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
P+V TF+ L++G CR G+ + + L M LSP++ ++ +LI+ LC+E +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
N A + L + D+ P + +I+ FCK G D A+ + M K D+VT T L
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
I G C G+ +A+ I ++++ ++N ++ L KG E ++ +
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGK 571
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 178/350 (50%), Gaps = 2/350 (0%)
Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
Y +++NAL K + A + ++ D+ L+ G R ++ A + F M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 289 -SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
C+P+ V+Y+ LI GLC V + L ++ K P TYT +I C G
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG-CQPSTRTYTVLIKALCDRGL 316
Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
+DKA +++EM G KP+ T+ VLIDG + G + A + +M+ P V+T+++
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWND 467
LI+GYC++G++ +L M+ + PNV TF L+ LC+ + A LK++ N
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 468 LVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAI 527
L P YN +IDG C+ G+++ A +++ M +PD +TFT +I C +G+ A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 528 SIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
+ MLR G + D++T +LI + K G +A I++ + + L P
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 198/438 (45%), Gaps = 38/438 (8%)
Query: 169 MGLHDSVQVVFDYMRSD-GHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTF 227
+ L D+++V FD M + PNS + G+ + A GL Q ST
Sbjct: 244 LNLRDALKV-FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 228 MYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDM 287
Y L+ AL + D+A +F E +P+ T+ +LI GL R G++++A M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 288 GSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGK 347
P ++TYN LI+G C+ V ELL V K P+V T+ ++ G C++GK
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLT-VMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 348 MDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSS 407
KA + M G+ P V++NVLIDG + G+M +A + M F PD +TF++
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 408 LIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL---- 463
+I+ +C+ G+ + M K +S + T T LI+ +CK + DA L+ L
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 464 -----------------------------KWND--LVPKPFMYNPVIDGFCKAGNVDEAN 492
K N LVP Y ++DG ++G++ +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 493 VIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
I+ M+ C P+ +TI+I G C GR+ EA + + M G +P+ +T ++
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 553 LKGGMPNEAFRIMQRASE 570
+ G + A ++ E
Sbjct: 662 VNNGKLDRALETVRAMVE 679
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/482 (18%), Positives = 201/482 (41%), Gaps = 36/482 (7%)
Query: 117 LCEKLSPLNSLEVIKR-LDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSV 175
LC P ++ ++KR LDN L+ +YN+++ LC G ++
Sbjct: 416 LCRVGKPYKAVHLLKRMLDN---------------GLSPDIVSYNVLIDGLCREGHMNTA 460
Query: 176 QVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNA 235
+ M P+ +++ + GK D A L +++ +L++
Sbjct: 461 YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
Query: 236 LVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPD 295
+ K +A+++ + ++ + N+++ LS+ +VK+ + G P
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580
Query: 296 IVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIY 355
+VTY TL+ GL R ++ +L+ +K S P+V YT +I+G C+ G++++A +
Sbjct: 581 VVTYTTLVDGLIRSGDITGSFRILELMKL-SGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 356 NEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC-- 413
+ M G+ P+ VT+ V++ G+ G + A M+ GY + +SSL+ G+
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLS 699
Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTI----------------LINALCKENRLNDAR 457
+ G N ++ + P I L+ LCKE R +++
Sbjct: 700 QKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESN 759
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
++ + + + M + +++ +C + ++ + + P +F ++I G
Sbjct: 760 DLVQNVLERGVFLEKAM-DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGL 818
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLP 577
+G A + ++L + V + + CL++G + ++ + + P
Sbjct: 819 KKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQLHCRERP 878
Query: 578 SW 579
++
Sbjct: 879 TF 880
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 191/361 (52%), Gaps = 9/361 (2%)
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
+ P VT+ NSLLN N +AV + + + +PDT TF LI GL +
Sbjct: 144 YEPDIVTL-----NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
+A M GC PD+VTY +++GLC+ + LL +++ ++ +VV Y+
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME-AAKIEANVVIYS 257
Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
+VI CK D A ++ EM + G++P+ +T++ LI G A + M+
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
P++VTFS+LID + + G+L + KL +EM +++ PN++T++ LIN C +RL +A
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
++ L+ + D +P YN +I+GFCKA VD+ + EM ++ + VT+T LI G
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQN 573
A +F +M+ +G P+ +T N L+ L K G +A F +QR++ + +
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Query: 574 L 574
+
Sbjct: 498 I 498
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 209/435 (48%), Gaps = 12/435 (2%)
Query: 127 LEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDG 186
L I +++ L + F E + L ++H+ TYN+++ C + M G
Sbjct: 85 LSAIAKMNKFDLVISFGEKMEI-LGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 187 HLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNN 241
+ P+ + ++ + A L+ Q ++P VT +T L++ L N
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT-----LIHGLFLHNK 198
Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNT 301
A EAV + + QPD T+ ++ GL + G+ A M + ++V Y+T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 302 LISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSC 361
+I LC+ L E++ K P+V+TY+S+IS C G+ A+ + ++M
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKG-VRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 362 GIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQG 421
I P+ VTF+ LID F K G +V AE + E M+ P++ T+SSLI+G+C +L +
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 422 LKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDG 481
++ + M K+ PNV T+ LIN CK R++ +++ LV Y +I G
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 482 FCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPD 541
F +A + D A ++ +M P+ +T+ IL+ G C G++ +A+ +F + R PD
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Query: 542 DITVNSLISCLLKGG 556
T N +I + K G
Sbjct: 498 IYTYNIMIEGMCKAG 512
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 180/359 (50%), Gaps = 4/359 (1%)
Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
G+++Q RP S ++ LL+A+ K N D + ++ L + +T+NILI
Sbjct: 67 GVMAQSRPFP---SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCF 123
Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
R + A M G PDIVT N+L++G C N ++ L+ ++ + + PD
Sbjct: 124 CRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM-VEMGYKPD 182
Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
VT+T++I G K +A + + M G +P VT+ +++G K G+ A +
Sbjct: 183 TVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLN 242
Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
+M + +VV +S++ID C+ + L L EM+ K + PNV T++ LI+ LC
Sbjct: 243 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302
Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
R +DA R L + + P ++ +ID F K G + +A + EM ++ P+ T++
Sbjct: 303 RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYS 362
Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
LI G CM R+ EA + M+R C P+ +T N+LI+ K ++ + + S+
Sbjct: 363 SLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 178/346 (51%), Gaps = 4/346 (1%)
Query: 225 STFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
+++ Y +L + D+A+ +F + P F+ L+ ++++ + F
Sbjct: 42 TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101
Query: 285 YDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCK 344
M G S ++ TYN LI+ CR + ++ LL ++ K + PD+VT S+++G+C
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM-MKLGYEPDIVTLNSLLNGFCH 160
Query: 345 LGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVT 404
++ A + ++M G KP VTF LI G A + +RM+ G PD+VT
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 405 FSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLK 464
+ ++++G C+ G + L L ++M+ + NV ++ +I++LCK +DA +++
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 465 WNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMV 524
+ P Y+ +I C G +A+ ++++M E++ P+ VTF+ LI KG++V
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 525 EAISIFNKMLRIGCAPDDITVNSLIS--CLL-KGGMPNEAFRIMQR 567
+A ++ +M++ P+ T +SLI+ C+L + G + +M R
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 139/266 (52%), Gaps = 7/266 (2%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
Y+ V+ SLC+ D +F M + G PN +S G+ A LLS
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 219 PGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG---LSRIG 275
++ + +++L++A VK+ +A +++E + P+ +T++ LI G L R+G
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
E K+ E M C P++VTYNTLI+G C+ V +G EL +E+ + + VTY
Sbjct: 376 EAKQMLEL---MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG-LVGNTVTY 431
Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
T++I G+ + D A ++ +M S G+ P+ +T+N+L+DG K G + A + E +
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQG 421
PD+ T++ +I+G C+ G+ G
Sbjct: 492 STMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%)
Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
S++ + TY+ ++ C + + + + M LPN ++ +A + D
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
L + + +T Y +L++ + + D A +FK+ + P+ T+NIL+ G
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARG 315
L + G++ KA F + PDI TYN +I G+C+ + G
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++ C+ D +F M G + N+ + +A CD A+ + Q
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
V + YN LL+ L K +A+ +F+ R +PD +T+NI+I+G+ + G+
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Query: 278 KKAFEFF 284
K +F
Sbjct: 515 KMGGIYF 521
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 184/376 (48%), Gaps = 1/376 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+N ++R LC+ G + + D + G LPN F+ + G+ D A ++
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
YN+L+ L K + EA + +PD++T+N LI G + G V
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+ A D G PD TY +LI GLC E R L E K P+V+ Y +
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG-IKPNVILYNT 396
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I G G + +A + NEM+ G+ P TFN+L++G K+G + A+ + + M+S G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
Y PD+ TF+ LI GY ++ L++ D M + P+VYT+ L+N LCK ++ D
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
K + P F +N +++ C+ +DEA ++ EM+ K PD VTF LI G
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 518 CMKGRMVEAISIFNKM 533
C G + A ++F KM
Sbjct: 577 CKNGDLDGAYTLFRKM 592
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 195/397 (49%), Gaps = 1/397 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
+YN +M L + G D V+ MR G P+ + S + + AA LL+
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
M+ Y +++ ++N E +F + TFN L++ L + G+V
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
K+ + + G P++ TYN I GLC+ E+ G + + PDV+TY +
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL-DGAVRMVGCLIEQGPKPDVITYNN 291
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I G CK K +A +M + G++P + T+N LI G+ K G + AE + + G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
++PD T+ SLIDG C G+ N+ L L +E GK + PNV + LI L + + +A
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+ ++ L+P+ +N +++G CK G V +A+ +V M K PD TF ILI G+
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
+ +M A+ I + ML G PD T NSL++ L K
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 196/419 (46%), Gaps = 16/419 (3%)
Query: 167 CEMGLHDSVQVVFDY----MRSDGHLPNSPMIEFFVSSCI-----------RAGKCDAAK 211
CEM + VV + +++G+ M+ VS C+ + G +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
LL + V + F YN + L ++ D AV M +PD T+N LI GL
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
+ + ++A + M + G PD TYNTLI+G C+ V ++ + F F PD
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG-FVPD 355
Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
TY S+I G C G+ ++A ++NE GIKP+ + +N LI G G ++ A +
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
M G +P+V TF+ L++G C+ G ++ L M K P+++TF ILI+ +
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
++ +A L + N + P + YN +++G CK ++ M EK C P+ TF
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
IL+ C ++ EA+ + +M PD +T +LI K G + A+ + ++ E
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 188/397 (47%), Gaps = 2/397 (0%)
Query: 148 VNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKC 207
VN L TYN ++ C+ G+ + + +G +P+ + G+
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 208 DAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
+ A L ++ + + +YN+L+ L Q EA + E P+ TFNIL
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
+ GL ++G V A M S G PDI T+N LI G ++ E+L +V +
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL-DVMLDNG 491
Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
PDV TY S+++G CK K + Y M G P+ TFN+L++ + + A
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEM-KGKNLSPNVYTFTILINA 446
+ E M + PD VTF +LIDG+C+NG L+ L +M + +S + T+ I+I+A
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 447 LCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPD 506
++ + A + +++ L P + Y ++DGFCK GNV+ + EM E P
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Query: 507 KVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDI 543
T +I C++ R+ EA I ++M++ G P+ +
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 206/447 (46%), Gaps = 12/447 (2%)
Query: 121 LSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFD 180
L P + VIK +P L+ R + H+ TY V+ L G ++++ V
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64
Query: 181 YMRSDGHLPNSPMIEFFVSSCI---RAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
MR + + N + +V + R GK A + + + + F YN++++ LV
Sbjct: 65 DMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLV 122
Query: 238 KQNNADEAVYMFKEYFRLYSQ---PDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSP 294
D+A K Y R+ + PD ++F I ++ + A +M S GC
Sbjct: 123 DSGYFDQA---HKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 295 DIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI 354
++V Y T++ G N A G+EL ++ S S + T+ ++ CK G + + +
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKM-LASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238
Query: 355 YNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCR 414
+++ G+ P+ T+N+ I G + G + A M ++ G PDV+T+++LI G C+
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298
Query: 415 NGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFM 474
N + + +M + L P+ YT+ LI CK + A R + +N VP F
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 475 YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKML 534
Y +IDG C G + A + E K KP+ + + LI G +G ++EA + N+M
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 535 RIGCAPDDITVNSLISCLLKGGMPNEA 561
G P+ T N L++ L K G ++A
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDA 445
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 1/301 (0%)
Query: 268 IQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSE 327
++ R G+V++A F M + C P + +YN ++S L + H++ ++ +
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG- 141
Query: 328 FSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAE 387
+PDV ++T + +CK + A + N M+S G + + V + ++ GF +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
+ +ML+ G + TF+ L+ C+ G + + KL D++ + + PN++T+ + I L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
C+ L+ A R + L P YN +I G CK EA V + +M + +PD
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
T+ LI G+C G + A I + G PD T SLI L G N A +
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 568 A 568
A
Sbjct: 382 A 382
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 146/330 (44%), Gaps = 13/330 (3%)
Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
+T+N+++ LC+MG + M S G+ P+ + K + A +L
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
V + YNSLLN L K + ++ + +K P+ +TFNIL++ L R +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
+ +A +M + +PD VT+ TLI G C+ ++ + L ++++ + S TY
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
+I + + + A ++ EM + P T+ +++DGF K GN+ M+
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
G++P + T +I+ C ++ + + M K L P +N +C ++ A
Sbjct: 667 GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVA 720
Query: 457 RRFLKQLKWNDLVPKP----FMYNPVIDGF 482
+L DL+ K + Y + DG
Sbjct: 721 A---PKLVLEDLLKKSCITYYAYELLFDGL 747
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 220/456 (48%), Gaps = 21/456 (4%)
Query: 126 SLEVIKRLDNPKLGLKFLE---FSRVN--------LSLNH------SFKTYNLVMRSLCE 168
++ VI +L +PK + L+ SR N L L H S ++L++R C+
Sbjct: 108 AIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQ 167
Query: 169 MGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFM 228
+ + D F M+ G P + ++ R + + A + E+ + +
Sbjct: 168 LRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYT 227
Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
+N ++N L K+ +A +P T+N L+QG S G ++ A +M
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287
Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
S G PD+ TYN ++S +C NE R E+L+E+K + PD V+Y +I G G +
Sbjct: 288 SKGFQPDMQTYNPILSWMC--NE-GRASEVLREMK-EIGLVPDSVSYNILIRGCSNNGDL 343
Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
+ A +EM G+ P+ T+N LI G + +AE + + G + D VT++ L
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
I+GYC++G + L DEM + P +T+T LI LC++N+ +A +++ +
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
P M N ++DG C GN+D A ++ EM+ PD VT+ L+ G C +G+ EA
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
+ +M R G PD I+ N+LIS K G AF +
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 192/395 (48%), Gaps = 4/395 (1%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+N+++ LC+ G + M G P V G+ + A+ ++S+
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ YN +L+ + + A E + KE + PD+ ++NILI+G S G++
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLV---PDSVSYNILIRGCSNNGDL 343
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+ AF + +M G P TYNTLI GL N++ L++E++ K D VTY
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG-IVLDSVTYNI 402
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I+GYC+ G KA +++EM + GI+P+ T+ LI + A+ + E+++ G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
PD+V ++L+DG+C G +++ L EM +++P+ T+ L+ LC E + +AR
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+ ++K + P YN +I G+ K G+ A ++ EM P +T+ L+ G
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCL 552
A + +M G P+D + S+I +
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 152/308 (49%), Gaps = 4/308 (1%)
Query: 261 TWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLK 320
T F++L++ ++ V +A E FY M G P T N +++ L R+N +
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 321 EVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
++ ++ E +V T+ +I+ CK GK+ KA G M GIKP+ VT+N L+ GF
Sbjct: 215 DM-YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 381 GNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTF 440
G + A + M S G+ PD+ T++ ++ C G+ ++ L+ EMK L P+ ++
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSY 330
Query: 441 TILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEE 500
ILI L A + ++ +VP + YN +I G ++ A +++ E+ E
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 501 KRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNE 560
K D VT+ ILI G+C G +A ++ ++M+ G P T SLI L + E
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 561 AFRIMQRA 568
A + ++
Sbjct: 451 ADELFEKV 458
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 1/223 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN+++ C+ G + D M +DG P + R K A L +
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ M N+L++ N D A + KE + PD T+N L++GL G+
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
++A E +M G PD ++YNTLISG + + ++++ F+P ++TY +
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF-MVRDEMLSLGFNPTLLTYNA 577
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKV 380
++ G K + + A + EM S GI P+ +F +I+ +
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 64/151 (42%)
Query: 160 NLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRP 219
N +M C +G D + M P+ + GK + A+ L+ + +
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
Query: 220 GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKK 279
+ YN+L++ K+ + A + E L P T+N L++GLS+ E +
Sbjct: 531 RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 590
Query: 280 AFEFFYDMGSFGCSPDIVTYNTLISGLCRVN 310
A E +M S G P+ ++ ++I + ++
Sbjct: 591 AEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 186/363 (51%), Gaps = 4/363 (1%)
Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
CD L + + G V++ ++ + L++A K A++AV F +PD +T+N+
Sbjct: 108 CDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNV 167
Query: 267 LIQGLSRIGEV--KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
+++ + R EV AF + +M CSP++ T+ L+ GL + + ++ ++
Sbjct: 168 ILRVMMR-EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTG 226
Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
+ SP+ VTYT +ISG C+ G D A ++ EM + G P +V N L+DGF K+G MV
Sbjct: 227 RG-ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMV 285
Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
A + G++ + +SSLIDG R + Q +L M KN+ P++ +TILI
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILI 345
Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
L K ++ DA + L + + P + YN VI C G ++E + EM E
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF 405
Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
PD T TILI C G + EA IF ++ + GC+P T N+LI L K G EA +
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 565 MQR 567
+ +
Sbjct: 466 LHK 468
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 129/515 (25%), Positives = 217/515 (42%), Gaps = 85/515 (16%)
Query: 129 VIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHL 188
VIK N +LG +F ++ L +++ LV+ L E D + ++S G
Sbjct: 66 VIKDEVNRQLGFRFFIWASRRERLRSR-ESFGLVIDMLSEDNGCDLYWQTLEELKSGGVS 124
Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
+S +S+ + G + A + + + F YN +L ++++ E +M
Sbjct: 125 VDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMRE----EVFFM 180
Query: 249 -----FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLI 303
+ E + P+ +TF IL+ GL + G A + F DM G SP+ VTY LI
Sbjct: 181 LAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240
Query: 304 SGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM--------------- 348
SGLC+ +L E++ + PD V + +++ G+CKLG+M
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNY-PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGF 299
Query: 349 --------------------DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEY 388
+A +Y M IKP + + +LI G K G + A
Sbjct: 300 VLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALK 359
Query: 389 MRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC 448
+ M S G PD ++++I C G L +G L EM P+ T TILI ++C
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419
Query: 449 KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKR------ 502
+ + +A +++ + P +N +IDG CK+G + EA +++ +ME R
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479
Query: 503 ---------------------------------CKPDKVTFTILIIGHCMKGRMVEAISI 529
PD V++ +LI G C G + A+ +
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
N + G +PD +T N+LI+ L + G EAF++
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 193/424 (45%), Gaps = 9/424 (2%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TY +++ LC+ G D + +F M++ G+ P+S + + G+ A LL F
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ Y+SL++ L + +A ++ + +PD + ILIQGLS+ G++
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+ A + M S G SPD YN +I LC + G L E+ ++E PD T+T
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS-ETESFPDACTHTI 413
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I C+ G + +A I+ E+ G PS TFN LIDG K G + A + +M G
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVG 472
Query: 398 -----YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
+L + + D +G + + + SP++ ++ +LIN C+
Sbjct: 473 RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
++ A + L L+ L P YN +I+G + G +EA + ++ R P +
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP--AVYRS 590
Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
L+ C K +++ A +++ K L+ DD T N + C +G R+++ +
Sbjct: 591 LMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKD 650
Query: 573 NLQL 576
L L
Sbjct: 651 ELTL 654
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 35/315 (11%)
Query: 260 DTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELL 319
D++ F +LI +++G +KA E F M F C PD+ TYN ++ + R
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR----------- 174
Query: 320 KEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGK 379
+EV F F+ +YNEM C P+ TF +L+DG K
Sbjct: 175 EEVFFMLAFA------------------------VYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 380 VGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYT 439
G A+ M + M G P+ VT++ LI G C+ G + KL EM+ P+
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 440 FTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEME 499
L++ CK R+ +A L+ + + V Y+ +IDG +A +A + A M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 500 EKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN 559
+K KPD + +TILI G G++ +A+ + + M G +PD N++I L G+
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 560 EAFRIMQRASEDQNL 574
E + SE ++
Sbjct: 391 EGRSLQLEMSETESF 405
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 165/382 (43%), Gaps = 45/382 (11%)
Query: 189 PNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYM 248
P+ + + +AGK + A LLS ++ T+ YN+++ AL + +E +
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395
Query: 249 FKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCR 308
E S PD T ILI + R G V++A E F ++ GCSP + T+N LI GLC+
Sbjct: 396 QLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455
Query: 309 VNEVARGHELLKEVKF--------------------------------------KSEFSP 330
E+ LL +++ + SP
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSP 515
Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
D+V+Y +I+G+C+ G +D A + N + G+ P +VT+N LI+G +VG A +
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
F + P V + SL+ CR ++ L + K + T I KE
Sbjct: 576 YAKDDFRHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETAN-EIEQCFKE 632
Query: 451 NRLNDARRFLKQL--KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKV 508
A R L +L + ++L P Y + G C++G EA ++ + + EK+
Sbjct: 633 GETERALRRLIELDTRKDELTLGP--YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPP 690
Query: 509 TFTILIIGHCMKGRMVEAISIF 530
+ LI G C + ++ AI +F
Sbjct: 691 SCVKLIHGLCKREQLDAAIEVF 712
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 95/246 (38%), Gaps = 46/246 (18%)
Query: 145 FSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRA 204
F R++ S N SF T + E G + G P+ ++ RA
Sbjct: 478 FLRLSHSGNRSFDT-------MVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 205 GKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMF--KEYFR----LYSQ 258
G D A LL+ + ++ + YN+L+N L + +EA +F K+ FR +Y
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRS 590
Query: 259 PDTWT---------FNILIQGLSRI-----------------GEVKKAFEFFYDMGSFGC 292
TW+ FN+ ++ L +I GE ++A ++ +
Sbjct: 591 LMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKD 650
Query: 293 SPDIVTYNTLISGLC---RVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMD 349
+ Y + GLC R +E +L+E K P V +I G CK ++D
Sbjct: 651 ELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVT-PPSCV---KLIHGLCKREQLD 706
Query: 350 KATGIY 355
A ++
Sbjct: 707 AAIEVF 712
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 227/468 (48%), Gaps = 10/468 (2%)
Query: 119 EKLSPLNSLEVIKRLDNPKLGLK-FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQV 177
++L P + +I + N L L+ FL + + H++ TY+ ++ L D V+
Sbjct: 45 QRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVES 104
Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIR----AGKCDAAKGLLSQFRPGEVTMSTFMYNSLL 233
+ +R+ P E +R AG+ +++ + + V S N+LL
Sbjct: 105 LMADLRNS--YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 162
Query: 234 NALVKQNNADEAVYMFKEYFRLYS-QPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
N L++ D MFK + P+ +T N+L++ L + +++ A++ ++ S G
Sbjct: 163 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 222
Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
P++VTY T++ G ++ +L+E+ + PD TYT ++ GYCKLG+ +A
Sbjct: 223 VPNLVTYTTILGGYVARGDMESAKRVLEEM-LDRGWYPDATTYTVLMDGYCKLGRFSEAA 281
Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
+ ++M I+P+ VT+ V+I K A M + ML ++PD +ID
Sbjct: 282 TVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDAL 341
Query: 413 CRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKP 472
C + ++++ L +M N P+ + LI+ LCKE R+ +AR+ + + +P
Sbjct: 342 CEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGS-IPSL 400
Query: 473 FMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
YN +I G C+ G + EA + +M E++CKP+ T+ +LI G G + E + + +
Sbjct: 401 LTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEE 460
Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWK 580
ML IGC P+ T L L K G +A +I+ A + + SW+
Sbjct: 461 MLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWE 508
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 181/343 (52%), Gaps = 3/343 (0%)
Query: 225 STFMYNSLLNALVKQNNADEAVYMF-KEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF 283
S + N++L ++VK D +V+ F KE + PD TFNILI L G +K+
Sbjct: 157 SVYTCNAILGSVVKSGE-DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215
Query: 284 FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYC 343
M G +P IVTYNT++ C+ ELL +K K DV TY +I C
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLC 274
Query: 344 KLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVV 403
+ ++ K + +M I P+ VT+N LI+GF G ++ A + MLSFG P+ V
Sbjct: 275 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 334
Query: 404 TFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQL 463
TF++LIDG+ G + LK+ M+ K L+P+ ++ +L++ LCK + AR F ++
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 464 KWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRM 523
K N + Y +IDG CK G +DEA V++ EM + PD VT++ LI G C GR
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 524 VEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
A I ++ R+G +P+ I ++LI + G EA RI +
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 497
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 207/420 (49%), Gaps = 3/420 (0%)
Query: 153 NHSFKTYNLVMRSLCEMGL-HDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAK 211
N + Y++++R G+ DS+++ F M G P+ + S +++G+ +
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEI-FRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 212 GLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGL 271
L + ++ +N L+N L + + +++ Y+ ++ + P T+N ++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 272 SRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPD 331
+ G K A E M S G D+ TYN LI LCR N +A+G+ LL++++ K P+
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR-KRMIHPN 297
Query: 332 VVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRE 391
VTY ++I+G+ GK+ A+ + NEM S G+ P+ VTFN LIDG GN A M
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 392 RMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKEN 451
M + G P V++ L+DG C+N + + MK + T+T +I+ LCK
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 452 RLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFT 511
L++A L ++ + + P Y+ +I+GFCK G A IV + P+ + ++
Sbjct: 418 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 512 ILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
LI C G + EAI I+ M+ G D T N L++ L K G EA M+ + D
Sbjct: 478 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 190/409 (46%), Gaps = 1/409 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+N+++ LC G + + M G+ P + + G+ AA LL
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ V YN L++ L + N + + ++ + P+ T+N LI G S G+V
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
A + +M SFG SP+ VT+N LI G ++ ++ K +P V+Y
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-LTPSEVSYGV 373
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
++ G CK + D A G Y M G+ +T+ +IDG K G + A + M G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
PD+VT+S+LI+G+C+ G+ ++ + LSPN ++ LI C+ L +A
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
R + + F +N ++ CKAG V EA + M P+ V+F LI G+
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
G ++A S+F++M ++G P T SL+ L KGG EA + ++
Sbjct: 554 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 602
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 195/471 (41%), Gaps = 74/471 (15%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN V+ C+ G + + D+M+S G + + R+ + LL
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
R + + YN+L+N + A + E P+ TFN LI G G
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNE--VARGHE------------------ 317
K+A + FY M + G +P V+Y L+ GLC+ E +ARG
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 318 ---------------LLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
LL E+ K PD+VTY+++I+G+CK+G+ A I + G
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMS-KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 363 IKPSAV-----------------------------------TFNVLIDGFGKVGNMVSAE 387
+ P+ + TFNVL+ K G + AE
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 388 YMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINAL 447
M S G LP+ V+F LI+GY +G+ + + DEM P +T+ L+ L
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 448 CKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
CK L +A +FLK L MYN ++ CK+GN+ +A + EM ++ PD
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Query: 508 VTFTILIIGHCMKGRMVEAISIFNK--MLRIGCAPDDITVNSLISCLLKGG 556
T+T LI G C KG+ V AI +F K R P+ + + + K G
Sbjct: 649 YTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 207/426 (48%), Gaps = 4/426 (0%)
Query: 147 RVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGK 206
RV LS N Y+ ++ + C MG +++ M +GH + V+S +AGK
Sbjct: 466 RVGLSPNGII--YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 207 CDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNI 266
A+ + + +T ++ L+N +A +F E ++ P +T+
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 267 LIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKS 326
L++GL + G +++A +F + + + D V YNTL++ +C+ +A+ L E+ +S
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 327 EFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG-IKPSAVTFNVLIDGFGKVGNMVS 385
PD TYTS+ISG C+ GK A E + G + P+ V + +DG K G +
Sbjct: 644 -ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 702
Query: 386 AEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILIN 445
Y RE+M + G+ PD+VT +++IDGY R G++ + L EM +N PN+ T+ IL++
Sbjct: 703 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762
Query: 446 ALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKP 505
K ++ + + + N ++P + ++ G C++ ++ I+ + +
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822
Query: 506 DKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
D+ TF +LI C G + A + M +G + D T ++++S L + E+ ++
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882
Query: 566 QRASED 571
S+
Sbjct: 883 HEMSKQ 888
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 201/477 (42%), Gaps = 70/477 (14%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+N+++ SLC+ G + M SDG LPN+ + ++ +G+ A + +
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ F Y SLL L K + EA K + + DT +N L+ + + G +
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEV-----------ARGHELLKEVK--- 323
KA F +M PD TY +LISGLCR + ARG+ L +V
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689
Query: 324 ----------------FKSEF-----SPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCG 362
F+ + +PD+VT ++I GY ++GK++K + EM +
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749
Query: 363 IKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
P+ T+N+L+ G+ K ++ ++ + ++ G LPD +T SL+ G C + L GL
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809
Query: 423 KLCDEMKGKNLSPNVYTFTILINALC---------------------------------- 448
K+ + + + YTF +LI+ C
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869
Query: 449 -KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDK 507
+ +R ++R L ++ + P+ Y +I+G C+ G++ A V+ EM + P
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929
Query: 508 VTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
V + ++ G+ EA + ML++ P + +L+ K G EA +
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 986
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 198/482 (41%), Gaps = 82/482 (17%)
Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
VFD M GH P + + G A+ L + T MYN+LL A+
Sbjct: 565 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 624
Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFG-CSPDI 296
K N +AV +F E + PD++T+ LI GL R G+ A F + + G P+
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684
Query: 297 VTYNTLISGLCRVNEVARGHELLKEVKFKSEF-----SPDVVTYTSVISGYCKLGKMDKA 351
V Y + G+ + + G + F+ + +PD+VT ++I GY ++GK++K
Sbjct: 685 VMYTCFVDGMFKAGQWKAG------IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 352 TGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDG 411
+ EM + P+ T+N+L+ G+ K ++ ++ + ++ G LPD +T SL+ G
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 412 YCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALC----------------------- 448
C + L GLK+ + + + YTF +LI+ C
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Query: 449 ------------KENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNV-------- 488
+ +R ++R L ++ + P+ Y +I+G C+ G++
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918
Query: 489 ---------------------------DEANVIVAEMEEKRCKPDKVTFTILIIGHCMKG 521
DEA +++ M + + P +FT L+ C G
Sbjct: 919 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978
Query: 522 RMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWKK 581
++EA+ + M G D ++ N LI+ L G AF + + D L + K
Sbjct: 979 NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038
Query: 582 AV 583
A+
Sbjct: 1039 AL 1040
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 175/431 (40%), Gaps = 37/431 (8%)
Query: 159 YNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFR 218
YN ++ ++C+ G +F M LP+S +S R GK A +
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 219 P-GEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
G V + MY ++ + K +Y ++ L PD T N +I G SR+G++
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+K + +MG+ P++ TYN L+ G + +V+ L + + PD +T S
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG-ILPDKLTCHS 794
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLID----------GFGKVGNMVS-- 385
++ G C+ ++ I G++ TFN+LI F V M S
Sbjct: 795 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 854
Query: 386 ------------------AEYMRERMLSF-----GYLPDVVTFSSLIDGYCRNGQLNQGL 422
+ RM+ G P+ + LI+G CR G +
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914
Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
+ +EM + P + ++ AL K + ++A L+ + LVP + ++
Sbjct: 915 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 974
Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
CK GNV EA + M K D V++ +LI G C KG M A ++ +M G +
Sbjct: 975 CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANA 1034
Query: 543 ITVNSLISCLL 553
T +LI LL
Sbjct: 1035 TTYKALIRGLL 1045
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%)
Query: 157 KTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQ 216
+ Y ++ LC +G + VV + M + P + V + + GK D A LL
Sbjct: 895 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
++ + + +L++ K N EA+ + + D ++N+LI GL G+
Sbjct: 955 MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1014
Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGL 306
+ AFE + +M G + TY LI GL
Sbjct: 1015 MALAFELYEEMKGDGFLANATTYKALIRGL 1044
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 201/420 (47%), Gaps = 11/420 (2%)
Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
L + H TYN+++ C + M G+ P+ + ++ +
Sbjct: 114 LEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 210 AKGLLSQ-----FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTF 264
A L+ Q +RP +T +T L++ L N A EAV + + QP+ T+
Sbjct: 174 AVALVDQMVEMGYRPDTITFTT-----LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 265 NILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKF 324
+++ GL + G+ A M + D+V +NT+I LC+ V L KE++
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 325 KSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMV 384
K P+VVTY+S+IS C G+ A+ + ++M I P+ VTFN LID F K G V
Sbjct: 289 KG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 385 SAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILI 444
AE + + M+ PD+ T++SL++G+C + +L++ ++ + M K+ P+V T+ LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 445 NALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCK 504
CK R+ D +++ LV Y +I G G+ D A + +M
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 505 PDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
PD +T++IL+ G C G++ +A+ +F+ M + D ++I + K G ++ + +
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 178/355 (50%), Gaps = 9/355 (2%)
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
+ P VT+S SLLN +AV + + + +PDT TF LI GL +
Sbjct: 151 YEPSIVTLS-----SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
+A M GC P++VTY +++GLC+ + LL +++ ++ DVV +
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKME-AAKIEADVVIFN 264
Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
++I CK +D A ++ EM + GI+P+ VT++ LI G A + M+
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
P++VTF++LID + + G+ + KL D+M +++ P+++T+ L+N C +RL+ A
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
++ + + D P YN +I GFCK+ V++ + EM + D VT+T LI G
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPN---EAFRIMQRA 568
G A +F +M+ G PD +T + L+ L G E F MQ++
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 187/379 (49%), Gaps = 1/379 (0%)
Query: 178 VFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALV 237
+ D M G PN V+ + G D A LL++ ++ ++N+++++L
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 238 KQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIV 297
K + D+A+ +FKE +P+ T++ LI L G A + DM +P++V
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 298 TYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNE 357
T+N LI + + +L ++ K PD+ TY S+++G+C ++DKA ++
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDM-IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 358 MNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQ 417
M S P VT+N LI GF K + + M G + D VT+++LI G +G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 418 LNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNP 477
+ K+ +M + P++ T++IL++ LC +L A ++ +++ ++Y
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 478 VIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIG 537
+I+G CKAG VD+ + + K KP+ VT+ +I G C K + EA ++ KM G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 538 CAPDDITVNSLISCLLKGG 556
P+ T N+LI L+ G
Sbjct: 571 PLPNSGTYNTLIRAHLRDG 589
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 200/416 (48%), Gaps = 7/416 (1%)
Query: 159 YNLVMRS-LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLS 215
Y ++R+ L +M L D++ + ++S P ++EF +S+ + K D L
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSR---PLPSIVEFNKLLSAIAKMKKFDVVISLGE 109
Query: 216 QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIG 275
+ + E+ + YN L+N +++ A+ + + +L +P T + L+ G
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 276 EVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTY 335
+ A M G PD +T+ TLI GL N+ + L+ + + P++VTY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTY 228
Query: 336 TSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLS 395
V++G CK G D A + N+M + I+ V FN +ID K ++ A + + M +
Sbjct: 229 GVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 288
Query: 396 FGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLND 455
G P+VVT+SSLI C G+ + +L +M K ++PN+ TF LI+A KE + +
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348
Query: 456 ARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILII 515
A + + + P F YN +++GFC +D+A + M K C PD VT+ LI
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 516 GHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
G C R+ + +F +M G D +T +LI L G + A ++ ++ D
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 210/422 (49%), Gaps = 11/422 (2%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLP-----NSPMIEFFVSSCIRAGKCDA 209
S + ++ + +M +D V +F+ M+ G P N M +SS C
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141
Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
K + F P VT + SLLN N ++A+ +F + + +P+ T+ LI+
Sbjct: 142 GKMMKLGFEPDLVT-----FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
L + + A E F MG+ G P++VTYN L++GLC + LL+++ K
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM-MKRRIE 255
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
P+V+T+T++I + K+GK+ +A +YN M + P T+ LI+G G + A M
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
M G P+ V +++LI G+C++ ++ G+K+ EM K + N T+T+LI C
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
R + A+ Q+ P YN ++DG C G V++A +I M ++ + VT
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
+TI+I G C G++ +A +F + G P+ IT ++IS + G+ +EA + ++
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 570 ED 571
ED
Sbjct: 496 ED 497
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 183/349 (52%), Gaps = 4/349 (1%)
Query: 229 YNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMG 288
+ LL+ + K N D + +F++ L P T NI++ + + +A F M
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
G PD+VT+ +L++G C N + L ++ F P+VVTYT++I CK +
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI-LGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
+ A ++N+M + G +P+ VT+N L+ G ++G A ++ M+ P+V+TF++L
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
ID + + G+L + +L + M ++ P+V+T+ LIN LC L++AR+ ++ N
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
P +Y +I GFCK+ V++ I EM +K + +T+T+LI G+C+ GR A
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA---FRIMQRASEDQNL 574
+FN+M PD T N L+ L G +A F M++ D N+
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 3/409 (0%)
Query: 155 SFKTYNLVMRS-LCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGL 213
+F +Y ++R+ L + +D++ + F M LP+ +S + + D L
Sbjct: 47 AFSSYRKILRNGLHNLQFNDALDL-FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 214 LSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSR 273
Q + + N +++ + + A + +L +PD TF L+ G
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165
Query: 274 IGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVV 333
++ A F + G P++VTY TLI LC+ + EL ++ P+VV
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS-RPNVV 224
Query: 334 TYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERM 393
TY ++++G C++G+ A + +M I+P+ +TF LID F KVG ++ A+ + M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 394 LSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRL 453
+ PDV T+ SLI+G C G L++ ++ M+ PN +T LI+ CK R+
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 454 NDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTIL 513
D + ++ +V Y +I G+C G D A + +M +R PD T+ +L
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 514 IIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
+ G C G++ +A+ IF M + + +T +I + K G +AF
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 175/358 (48%), Gaps = 11/358 (3%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+ ++ C + +FD + G PN + + + A L +Q
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 218 -----RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
RP VT YN+L+ L + +A ++ ++ + +P+ TF LI
Sbjct: 215 GTNGSRPNVVT-----YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
++G++ +A E + M PD+ TY +LI+GLC + ++ ++ ++ P+
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME-RNGCYPNE 328
Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
V YT++I G+CK +++ I+ EM+ G+ + +T+ VLI G+ VG A+ + +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
M S PD+ T++ L+DG C NG++ + L + + M+ + + N+ T+TI+I +CK +
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
+ DA L + P Y +I GFC+ G + EA+ + +M+E P++ +
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 414 RNG----QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLV 469
RNG Q N L L M P++ FT L++ + K NR + +Q++ +
Sbjct: 56 RNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP 115
Query: 470 PKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI 529
P N V+ C + A+ + +M + +PD VTFT L+ G+C R+ +AI++
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 530 FNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
F+++L +G P+ +T +LI CL K N A + + +
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 203/413 (49%), Gaps = 15/413 (3%)
Query: 162 VMRSLC-EMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKG-------- 212
+++ LC + D++ +V M G +PN F + + G CD +
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPN-----VFSYNILLKGLCDENRSQEALELLH 182
Query: 213 LLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLS 272
+++ R G Y +++N K+ ++D+A + E PD T+N +I L
Sbjct: 183 MMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALC 242
Query: 273 RIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDV 332
+ + KA E M G PD +TYN+++ G C + LK+++ PDV
Sbjct: 243 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR-SDGVEPDV 301
Query: 333 VTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRER 392
VTY+ ++ CK G+ +A I++ M G+KP T+ L+ G+ G +V + +
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 393 MLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENR 452
M+ G PD FS LI Y + G+++Q + + +M+ + L+PN T+ +I LCK R
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 453 LNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTI 512
+ DA + +Q+ L P +YN +I G C + A ++ EM ++ + + F
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 513 LIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
+I HC +GR++E+ +F M+RIG P+ IT N+LI+ G +EA +++
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 198/413 (47%), Gaps = 1/413 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
+Y V+ + G D + M G LP+ +++ +A D A +L+
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
V YNS+L+ EA+ K+ +PD T+++L+ L + G
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+A + F M G P+I TY TL+ G + H LL ++ ++ PD ++
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL-DLMVRNGIHPDHYVFSI 376
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I Y K GK+D+A ++++M G+ P+AVT+ +I K G + A E+M+ G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
P + ++SLI G C + + +L EM + + N F +I++ CKE R+ ++
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+ + + + P YN +I+G+C AG +DEA +++ M KP+ VT++ LI G+
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASE 570
C RM +A+ +F +M G +PD IT N ++ L + A + R +E
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 183/404 (45%), Gaps = 1/404 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++ C G MRSDG P+ + + G+C A+ +
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ Y +LL + E + R PD + F+ILI ++ G+V
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+A F M G +P+ VTY +I LC+ V L E SP + Y S
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM-LYFEQMIDEGLSPGNIVYNS 446
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I G C K ++A + EM GI + + FN +ID K G ++ +E + E M+ G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
P+V+T+++LI+GYC G++++ +KL M L PN T++ LIN CK +R+ DA
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
K+++ + + P YN ++ G + A + + E + + T+ I++ G
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
C +A+ +F + + + T N +I LLK G +EA
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEA 670
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 3/345 (0%)
Query: 221 EVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKA 280
EVT Y L+ + D + + D F L++GL A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 281 FEF-FYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS--PDVVTYTS 337
+ M GC P++ +YN L+ GLC N ELL + PDVV+YT+
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
VI+G+ K G DKA Y+EM GI P VT+N +I K M A + M+ G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
+PD +T++S++ GYC +GQ + + +M+ + P+V T+++L++ LCK R +AR
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+ + L P+ Y ++ G+ G + E + ++ M PD F+ILI +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAF 562
+G++ +A+ +F+KM + G P+ +T ++I L K G +A
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 198/426 (46%), Gaps = 2/426 (0%)
Query: 135 NPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMI 194
PK + FL+ R + + TY+L+M LC+ G + +FD M G P
Sbjct: 281 QPKEAIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339
Query: 195 EFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFR 254
+ G GLL + ++++ L+ A KQ D+A+ +F + +
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 255 LYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVAR 314
P+ T+ +I L + G V+ A +F M G SP + YN+LI GLC N+ R
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 315 GHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLI 374
EL+ E+ + + + S+I +CK G++ ++ ++ M G+KP+ +T+N LI
Sbjct: 460 AEELILEM-LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 375 DGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLS 434
+G+ G M A + M+S G P+ VT+S+LI+GYC+ ++ L L EM+ +S
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578
Query: 435 PNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVI 494
P++ T+ I++ L + R A+ ++ + + YN ++ G CK D+A +
Sbjct: 579 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638
Query: 495 VAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
+ K + TF I+I GR EA +F G P+ T + ++
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 555 GGMPNE 560
G+ E
Sbjct: 699 QGLLEE 704
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 191/409 (46%), Gaps = 1/409 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN ++ +LC+ D V + M +G +P+ + +G+ A G L +
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
R V Y+ L++ L K EA +F + +P+ T+ L+QG + G +
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+ M G PD ++ LI + +V + + +++ + +P+ VTY +
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR-QQGLNPNAVTYGA 411
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
VI CK G+++ A + +M G+ P + +N LI G AE + ML G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
+ + F+S+ID +C+ G++ + KL + M + PNV T+ LIN C ++++A
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
+ L + L P Y+ +I+G+CK +++A V+ EME PD +T+ I++ G
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQ 566
R A ++ ++ G + T N ++ L K + ++A ++ Q
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 190/408 (46%), Gaps = 2/408 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
+++++ + + G D +VF MR G PN+ + ++G+ + A Q
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
++ +YNSL++ L N + A + E +T FN +I + G V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
++ + F M G P+++TYNTLI+G C ++ +LL + P+ VTY++
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM-VSVGLKPNTVTYST 551
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
+I+GYCK+ +M+ A ++ EM S G+ P +T+N+++ G + +A+ + R+ G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
++ T++ ++ G C+N + L++ + +L TF I+I+AL K R ++A+
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
N LVP + Y + + G ++E + + ME+ C D ++
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 731
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIM 565
+G + A + M+ + + SL LL GG E +R +
Sbjct: 732 LQRGEITRA-GTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYYRFL 778
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 7/314 (2%)
Query: 243 DEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEF--FYDMGSFGCSPDIVTYN 300
++A ++F E R + N + ++R + G+ +PD+ TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 301 TLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGI-YNEMN 359
LI CR + G L V K F D + +T ++ G C + A I M
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNV-IKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 360 SCGIKPSAVTFNVLIDGF---GKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNG 416
G P+ ++N+L+ G + + +M G PDVV+++++I+G+ + G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 417 QLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYN 476
++ EM + + P+V T+ +I ALCK ++ A L + N ++P YN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 477 PVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRI 536
++ G+C +G EA + +M +PD VT+++L+ C GR +EA IF+ M +
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 537 GCAPDDITVNSLIS 550
G P+ T +L+
Sbjct: 331 GLKPEITTYGTLLQ 344
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Query: 426 DEMKGKNLSPNVYTFTILINALCKENRLNDARRF--LKQLKWNDLVPKPFMYNPVIDGFC 483
DE+ + ++Y + + +++ R+ + + +++ P Y +I C
Sbjct: 39 DELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCC 98
Query: 484 KAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISI-FNKMLRIGCAPDD 542
+AG +D + + +K + D + FT L+ G C R +A+ I +M +GC P+
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASEDQ 572
+ N L+ L EA ++ ++D+
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDR 188
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 205/413 (49%), Gaps = 6/413 (1%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TYN+++++LC+ D + + M + G P++ +SS G + L +F
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF 242
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
P +YN+L+N L K+++ A + +E P+ +++ LI L G++
Sbjct: 243 EP-----VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+ AF F M GC P+I T ++L+ G +L ++ P+VV Y +
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
++ G+C G + KA +++ M G P+ T+ LI+GF K G++ A Y+ +ML+ G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
P+VV ++++++ CR+ + + L + M +N +P+V TF I LC RL+ A
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 458 RFLKQLKWNDLVPKPFM-YNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
+ +Q++ P + YN ++DG KA ++EA + E+ + + T+ L+ G
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
C G A+ + KM+ G +PD+IT+N +I K G A +++ S
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 233/519 (44%), Gaps = 69/519 (13%)
Query: 122 SPLNSLEVIKRLDNPK---LGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVV 178
+ + L+V+KRL L L F + + H+ T+ +++R L G DSVQ +
Sbjct: 39 AEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYL 98
Query: 179 FDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVK 238
M+ G + + +S + G + A + + + S +YN +L+ L+
Sbjct: 99 LQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG 158
Query: 239 QNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVT 298
+N ++++ R +P+ +T+N+L++ L + +V A + +M + GC PD V+
Sbjct: 159 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVS 218
Query: 299 YNTLISGLCRVNEVARGHE------------------LLKEVKFKSEF-----------S 329
Y T+IS +C V V G E L KE +K F S
Sbjct: 219 YTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 330 PDVVTYTSVISGYCKLGKMD-----------------------------------KATGI 354
P+V++Y+++I+ C G+++ A +
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 355 YNEM-NSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYC 413
+N+M G++P+ V +N L+ GF GN+V A + M G P++ T+ SLI+G+
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 414 RNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPF 473
+ G L+ + + ++M PNV +T ++ ALC+ ++ +A ++ + + P
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 474 MYNPVIDGFCKAGNVDEANVIVAEMEEK-RCKPDKVTFTILIIGHCMKGRMVEAISIFNK 532
+N I G C AG +D A + +ME++ RC P+ VT+ L+ G R+ EA + +
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 533 MLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASED 571
+ G T N+L+ G+P A +++ + D
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 144/312 (46%), Gaps = 2/312 (0%)
Query: 173 DSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSL 232
D++ + +R G PN V G A + S + + Y SL
Sbjct: 334 DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSL 393
Query: 233 LNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGC 292
+N K+ + D AVY++ + P+ + +++ L R + K+A M C
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 293 SPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKAT 352
+P + T+N I GLC + ++ ++++ + P++VTY ++ G K ++++A
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 353 GIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGY 412
G+ E+ G++ S+ T+N L+ G G A + +M+ G PD +T + +I Y
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 413 CRNGQLNQGLKLCDEMK--GKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVP 470
C+ G+ + ++ D + + P+V ++T +I LC+ N D L+++ +VP
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 471 KPFMYNPVIDGF 482
++ +I+ F
Sbjct: 634 SIATWSVLINCF 645
Score = 33.9 bits (76), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Query: 155 SFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLL 214
S TYN ++ C GL + M DG P+ + + + + GK + A +L
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Query: 215 S-------QFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNIL 267
++RP ++ Y +++ L + N ++ V + + P T+++L
Sbjct: 587 DLVSCGRRKWRPDVIS-----YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVL 641
Query: 268 I 268
I
Sbjct: 642 I 642
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 211/461 (45%), Gaps = 38/461 (8%)
Query: 142 FLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSC 201
LE R S+ S YN ++ L +MG D VF+ M+ D PN +
Sbjct: 330 LLERQRAKGSI-PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDML 387
Query: 202 IRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDT 261
RAGK D A L + + + N +++ L K DEA MF+E PD
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 262 WTFNILIQGLSRIGEVKKAFE-----------------------------------FFYD 286
TF LI GL ++G V A++ + D
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 287 MGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLG 346
M + CSPD+ NT + + + E +G + +E+K + F PD +Y+ +I G K G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAG 566
Query: 347 KMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFS 406
++ ++ M G +N++IDGF K G + A + E M + G+ P VVT+
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 407 SLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWN 466
S+IDG + +L++ L +E K K + NV ++ LI+ K R+++A L++L
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 467 DLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEA 526
L P + +N ++D KA ++EA V M+E +C P++VT+ ILI G C + +A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 527 ISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
+ +M + G P I+ ++IS L K G EA + R
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 211/447 (47%), Gaps = 2/447 (0%)
Query: 120 KLSPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVF 179
K P + V++RL + +++ + L H ++YN ++ + D++ +
Sbjct: 62 KPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQIL 121
Query: 180 DYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQ 239
M G P+ V C++A K ++ R + + Y +L+ A
Sbjct: 122 GEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV 181
Query: 240 NNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFYDMGSFGCSPDIVTY 299
N++D + +F++ L +P F LI+G ++ G V A +M S DIV Y
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241
Query: 300 NTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMN 359
N I +V +V + E++ + PD VTYTS+I CK ++D+A ++ +
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIE-ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 360 SCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLN 419
P +N +I G+G G A + ER + G +P V+ ++ ++ + G+++
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 420 QGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVI 479
+ LK+ +EMK K+ +PN+ T+ ILI+ LC+ +L+ A ++ L P N ++
Sbjct: 361 EALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 480 DGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCA 539
D CK+ +DEA + EM+ K C PD++TF LI G GR+ +A ++ KML C
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 540 PDDITVNSLISCLLKGGMPNEAFRIMQ 566
+ I SLI G + +I +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 194/397 (48%), Gaps = 1/397 (0%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
T+ ++ L ++G D V++ M NS + + + G+ + +
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
+ + N+ ++ + K ++ MF+E PD +++ILI GL + G
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
+ +E FY M GC D YN +I G C+ +V + ++LL+E+K K F P VVTY S
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG-FEPTVVTYGS 627
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFG 397
VI G K+ ++D+A ++ E S I+ + V ++ LIDGFGKVG + A + E ++ G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 398 YLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDAR 457
P++ T++SL+D + ++N+ L MK +PN T+ ILIN LCK + N A
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 458 RFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGH 517
F ++++ + P Y +I G KAGN+ EA + + PD + +I G
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Query: 518 CMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLK 554
R ++A S+F + R G + T L+ L K
Sbjct: 808 SNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 203/448 (45%), Gaps = 37/448 (8%)
Query: 158 TYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQF 217
TY ++ LC+ D +F+++ + +P + + AGK D A LL +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 218 RPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEV 277
R S YN +L L K DEA+ +F+E + + P+ T+NILI L R G++
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKL 393
Query: 278 KKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTS 337
AFE M G P++ T N ++ LC+ ++ + +E+ +K +PD +T+ S
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-CTPDEITFCS 452
Query: 338 VISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFG------------------- 378
+I G K+G++D A +Y +M + +++ + LI F
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 379 ----------------KVGNMVSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGL 422
K G M E + + ++PD ++S LI G + G N+
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 423 KLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGF 482
+L MK + + + I+I+ CK ++N A + L+++K P Y VIDG
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 483 CKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDD 542
K +DEA ++ E + KR + + V ++ LI G GR+ EA I ++++ G P+
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 543 ITVNSLISCLLKGGMPNEAFRIMQRASE 570
T NSL+ L+K NEA Q E
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKE 720
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 193/418 (46%), Gaps = 2/418 (0%)
Query: 151 SLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDAA 210
SL+ YN+ + S ++G D F + ++G P+ + +A + D A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 211 KGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQG 270
+ T+ YN+++ DEA + + S P +N ++
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 271 LSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSP 330
L ++G+V +A + F +M +P++ TYN LI LCR ++ EL ++ K+ P
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ-KAGLFP 410
Query: 331 DVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMR 390
+V T ++ CK K+D+A ++ EM+ P +TF LIDG GKVG + A +
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 391 ERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKE 450
E+ML + + ++SLI + +G+ G K+ +M +N SP++ ++ + K
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 451 NRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTF 510
R +++K VP Y+ +I G KAG +E + M+E+ C D +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 511 TILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRA 568
I+I G C G++ +A + +M G P +T S+I L K +EA+ + + A
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 151/316 (47%), Gaps = 6/316 (1%)
Query: 267 LIQGLSRIGEVKKAFEFF--YDMGS-FGCSPDIVTYNTLISGLCRVNEVARGHELLKEVK 323
+I L R+ +V +A E+F Y+ + P+ +YN+L+ + R ++L E+
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPE--SYNSLLLVMARCRNFDALDQILGEMS 125
Query: 324 FKSEFSPDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNM 383
F P V T ++ G K K+ + + M +P+ + LI F V +
Sbjct: 126 VAG-FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHS 184
Query: 384 VSAEYMRERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTIL 443
+ ++M GY P V F++LI G+ + G+++ L L DEMK +L ++ + +
Sbjct: 185 DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 444 INALCKENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRC 503
I++ K +++ A +F +++ N L P Y +I CKA +DEA + +E+ R
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 504 KPDKVTFTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFR 563
P + +I+G+ G+ EA S+ + G P I N +++CL K G +EA +
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALK 364
Query: 564 IMQRASEDQNLQLPSW 579
+ + +D L ++
Sbjct: 365 VFEEMKKDAAPNLSTY 380
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 5/279 (1%)
Query: 289 SFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKLGKM 348
SF P+ V I L R+ +V R E + + ++E +Y S++ +
Sbjct: 60 SFKPQPEFV-----IGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNF 114
Query: 349 DKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTFSSL 408
D I EM+ G PS T ++ G K + + + M F + P +++L
Sbjct: 115 DALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTL 174
Query: 409 IDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKWNDL 468
I + + L L +M+ P V+ FT LI KE R++ A L ++K + L
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234
Query: 469 VPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVEAIS 528
+YN ID F K G VD A E+E KPD+VT+T +I C R+ EA+
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 529 IFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQR 567
+F + + P N++I G +EA+ +++R
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 4/163 (2%)
Query: 122 SPLNSLEVIKRLDNPKLGLKFLEFSRVNLSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDY 181
S ++ + R+D L L+ L + L + T+N ++ +L + + V F
Sbjct: 662 SLIDGFGKVGRIDEAYLILEEL----MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 182 MRSDGHLPNSPMIEFFVSSCIRAGKCDAAKGLLSQFRPGEVTMSTFMYNSLLNALVKQNN 241
M+ PN ++ + K + A + + + ST Y ++++ L K N
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 242 ADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFF 284
EA +F + PD+ +N +I+GLS AF F
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 188/345 (54%), Gaps = 6/345 (1%)
Query: 217 FRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGE 276
+ P VT+ SL+N ++N +AV + + + +PD +N +I L +
Sbjct: 151 YEPDRVTIG-----SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 277 VKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYT 336
V AF+FF ++ G P++VTY L++GLC + + LL ++ K + +P+V+TY+
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYS 264
Query: 337 SVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSF 396
+++ + K GK+ +A ++ EM I P VT++ LI+G + A M + M+S
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 397 GYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDA 456
G L DVV++++LI+G+C+ ++ G+KL EM + L N T+ LI + ++ A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 457 RRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIG 516
+ F Q+ + + P + YN ++ G C G +++A VI +M+++ D VT+T +I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 517 HCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEA 561
C G++ EA S+F + G PD +T +++S L G+ +E
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 199/399 (49%), Gaps = 6/399 (1%)
Query: 168 EMGLHDSVQVVFDYMRSDGHLPNSPMIEF--FVSSCIRAGKCDAAKGLLSQFRPGEVTMS 225
++ L+D++ + D ++S P +++F +S+ ++ K D L + +
Sbjct: 63 DIKLNDAIDLFSDMVKSR---PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 226 TFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQGLSRIGEVKKAFEFFY 285
+ +N ++N A+ + + +L +PD T L+ G R V A
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 286 DMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFSPDVVTYTSVISGYCKL 345
M G PDIV YN +I LC+ V + KE++ K P+VVTYT++++G C
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVNGLCNS 238
Query: 346 GKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYMRERMLSFGYLPDVVTF 405
+ A + ++M I P+ +T++ L+D F K G ++ A+ + E M+ PD+VT+
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 406 SSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCKENRLNDARRFLKQLKW 465
SSLI+G C + ++++ ++ D M K +V ++ LIN CK R+ D + +++
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 466 NDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVTFTILIIGHCMKGRMVE 525
LV YN +I GF +AG+VD+A ++M+ PD T+ IL+ G C G + +
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 526 AISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRI 564
A+ IF M + D +T ++I + K G EA+ +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 190/397 (47%), Gaps = 1/397 (0%)
Query: 150 LSLNHSFKTYNLVMRSLCEMGLHDSVQVVFDYMRSDGHLPNSPMIEFFVSSCIRAGKCDA 209
L + + T+N+V+ C + M G+ P+ I V+ R +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 210 AKGLLSQFRPGEVTMSTFMYNSLLNALVKQNNADEAVYMFKEYFRLYSQPDTWTFNILIQ 269
A L+ + YN+++++L K ++A FKE R +P+ T+ L+
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 270 GLSRIGEVKKAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
GL A DM +P+++TY+ L+ + +V EL +E+ +
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM-VRMSID 292
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
PD+VTY+S+I+G C ++D+A +++ M S G V++N LI+GF K + +
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
M G + + VT+++LI G+ + G +++ + +M +SP+++T+ IL+ LC
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
L A + ++ ++ Y VI G CK G V+EA + + K KPD VT
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVN 546
+T ++ G C KG + E +++ KM + G +D T++
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 3/301 (0%)
Query: 272 SRIGEVK--KAFEFFYDMGSFGCSPDIVTYNTLISGLCRVNEVARGHELLKEVKFKSEFS 329
+R+ ++K A + F DM P IV +N L+S + ++ + L K+++
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG-IR 117
Query: 330 PDVVTYTSVISGYCKLGKMDKATGIYNEMNSCGIKPSAVTFNVLIDGFGKVGNMVSAEYM 389
D+ T+ VI+ +C ++ A I +M G +P VT L++GF + + A +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 390 RERMLSFGYLPDVVTFSSLIDGYCRNGQLNQGLKLCDEMKGKNLSPNVYTFTILINALCK 449
++M+ GY PD+V ++++ID C+ ++N E++ K + PNV T+T L+N LC
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 450 ENRLNDARRFLKQLKWNDLVPKPFMYNPVIDGFCKAGNVDEANVIVAEMEEKRCKPDKVT 509
+R +DA R L + + P Y+ ++D F K G V EA + EM PD VT
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 510 FTILIIGHCMKGRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRAS 569
++ LI G C+ R+ EA +F+ M+ GC D ++ N+LI+ K + ++ + S
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 570 E 570
+
Sbjct: 358 Q 358
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 218,034,506
Number of Sequences: 539616
Number of extensions: 9007853
Number of successful extensions: 30697
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 18828
Number of HSP's gapped (non-prelim): 3010
length of query: 595
length of database: 191,569,459
effective HSP length: 123
effective length of query: 472
effective length of database: 125,196,691
effective search space: 59092838152
effective search space used: 59092838152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)