Query 007627
Match_columns 595
No_of_seqs 445 out of 2494
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 06:30:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007627.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007627hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1E-110 4E-115 917.5 56.6 476 46-531 4-483 (490)
2 3iwj_A Putative aminoaldehyde 100.0 3E-105 1E-109 879.9 57.3 475 48-531 7-489 (503)
3 3ed6_A Betaine aldehyde dehydr 100.0 6E-105 2E-109 878.9 56.6 473 49-531 33-510 (520)
4 3rh9_A Succinate-semialdehyde 100.0 3E-105 1E-109 878.0 54.1 472 47-532 10-485 (506)
5 3k2w_A Betaine-aldehyde dehydr 100.0 5E-105 2E-109 876.6 55.1 476 46-531 10-488 (497)
6 4e4g_A Methylmalonate-semialde 100.0 4E-105 1E-109 880.0 54.0 488 34-530 12-504 (521)
7 3ifg_A Succinate-semialdehyde 100.0 6E-105 2E-109 872.8 54.6 468 48-529 12-482 (484)
8 3pqa_A Lactaldehyde dehydrogen 100.0 8E-105 3E-109 871.5 53.8 461 51-532 2-465 (486)
9 3r31_A BADH, betaine aldehyde 100.0 5E-105 2E-109 878.6 52.1 470 48-531 14-488 (517)
10 3ek1_A Aldehyde dehydrogenase; 100.0 1E-104 4E-109 873.4 53.9 467 48-530 32-501 (504)
11 3prl_A NADP-dependent glyceral 100.0 2E-104 8E-109 871.8 54.5 466 49-531 12-483 (505)
12 1a4s_A ALDH, betaine aldehyde 100.0 5E-104 2E-108 869.4 56.8 474 46-530 17-495 (503)
13 4f3x_A Putative aldehyde dehyd 100.0 2E-104 6E-109 871.3 52.8 469 47-530 24-496 (498)
14 2o2p_A Formyltetrahydrofolate 100.0 5E-104 2E-108 871.1 55.1 470 49-529 37-515 (517)
15 1bxs_A Aldehyde dehydrogenase; 100.0 9E-104 3E-108 866.4 57.2 468 49-530 21-495 (501)
16 3i44_A Aldehyde dehydrogenase; 100.0 9E-104 3E-108 865.6 56.9 467 48-528 25-495 (497)
17 1o04_A Aldehyde dehydrogenase, 100.0 5E-104 2E-108 868.4 54.7 468 49-530 20-494 (500)
18 3b4w_A Aldehyde dehydrogenase; 100.0 5E-104 2E-108 867.7 54.3 468 50-530 10-481 (495)
19 3u4j_A NAD-dependent aldehyde 100.0 5E-104 2E-108 872.6 54.1 470 49-531 23-498 (528)
20 2j6l_A Aldehyde dehydrogenase 100.0 1E-103 4E-108 866.5 54.7 471 49-530 24-498 (500)
21 2imp_A Lactaldehyde dehydrogen 100.0 2E-103 7E-108 861.2 56.1 468 49-530 7-478 (479)
22 1wnd_A Putative betaine aldehy 100.0 1E-103 5E-108 863.8 53.9 470 45-530 20-494 (495)
23 2d4e_A 5-carboxymethyl-2-hydro 100.0 3E-103 1E-107 865.2 57.0 471 49-530 27-504 (515)
24 3jz4_A Succinate-semialdehyde 100.0 6E-103 2E-107 858.2 57.4 468 49-530 10-480 (481)
25 3qan_A 1-pyrroline-5-carboxyla 100.0 3E-103 1E-107 868.5 54.5 468 49-531 38-516 (538)
26 2ve5_A BADH, betaine aldehyde 100.0 1E-102 4E-107 858.3 56.6 474 48-531 6-483 (490)
27 3r64_A NAD dependent benzaldeh 100.0 1E-102 3E-107 860.7 55.3 482 47-548 11-498 (508)
28 3ros_A NAD-dependent aldehyde 100.0 1E-102 4E-107 854.4 53.3 452 65-532 5-459 (484)
29 1uxt_A Glyceraldehyde-3-phosph 100.0 2E-102 7E-107 856.2 53.3 465 49-531 19-492 (501)
30 2w8n_A Succinate-semialdehyde 100.0 2E-102 6E-107 854.3 52.6 465 49-530 13-485 (487)
31 4h7n_A Aldehyde dehydrogenase; 100.0 2E-102 8E-107 851.7 51.2 469 61-546 3-472 (474)
32 4dng_A Uncharacterized aldehyd 100.0 5E-102 2E-106 851.9 51.3 468 49-531 7-478 (485)
33 3ty7_A Putative aldehyde dehyd 100.0 6E-102 2E-106 849.8 50.3 464 49-528 8-474 (478)
34 1uzb_A 1-pyrroline-5-carboxyla 100.0 3E-101 1E-105 850.0 55.3 467 49-530 38-515 (516)
35 1t90_A MMSDH, probable methylm 100.0 2E-101 6E-106 847.1 52.5 469 49-530 6-479 (486)
36 1euh_A NADP dependent non phos 100.0 3E-101 9E-106 844.0 53.5 460 49-530 5-473 (475)
37 3etf_A Putative succinate-semi 100.0 3E-100 9E-105 834.0 54.8 455 62-531 5-461 (462)
38 3sza_A Aldehyde dehydrogenase, 100.0 8E-100 3E-104 829.4 49.8 449 83-551 15-464 (469)
39 4e3x_A Delta-1-pyrroline-5-car 100.0 9.5E-99 3E-103 834.3 52.7 481 48-549 63-562 (563)
40 3lns_A Benzaldehyde dehydrogen 100.0 4.3E-99 1E-103 822.5 49.0 449 64-530 6-456 (457)
41 3ju8_A Succinylglutamic semial 100.0 1.2E-97 4E-102 817.4 52.0 460 50-531 7-471 (490)
42 2y53_A Aldehyde dehydrogenase 100.0 1.9E-96 6E-101 815.9 47.4 473 49-531 8-519 (534)
43 4f9i_A Proline dehydrogenase/d 100.0 3.7E-95 1.3E-99 846.8 55.2 469 48-531 531-1010(1026)
44 3v4c_A Aldehyde dehydrogenase 100.0 1.9E-94 6.6E-99 798.8 44.5 459 47-527 28-514 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 1.3E-92 4.3E-97 781.2 48.7 450 60-528 3-480 (510)
46 3haz_A Proline dehydrogenase; 100.0 1.6E-88 5.3E-93 789.5 51.4 435 80-531 544-987 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 7.3E-85 2.5E-89 709.7 33.3 409 67-531 10-435 (463)
48 3k9d_A LMO1179 protein, aldehy 100.0 3.1E-82 1.1E-86 691.1 32.2 421 79-530 5-448 (464)
49 1vlu_A Gamma-glutamyl phosphat 100.0 3.5E-82 1.2E-86 689.5 29.1 400 87-531 15-440 (468)
50 4ghk_A Gamma-glutamyl phosphat 100.0 7.7E-79 2.6E-83 660.4 36.3 393 85-531 25-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 4.7E-79 1.6E-83 659.0 33.2 391 85-531 13-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 2.5E-76 8.6E-81 642.5 34.7 415 80-531 1-449 (452)
53 4gic_A HDH, histidinol dehydro 93.4 8.5 0.00029 40.1 28.5 258 179-528 120-400 (423)
54 1kae_A HDH, histidinol dehydro 86.5 34 0.0012 35.7 29.5 254 179-528 114-393 (434)
55 2fiu_A Conserved hypothetical 70.6 8.5 0.00029 31.7 6.1 60 376-459 16-76 (99)
56 1b93_A Protein (methylglyoxal 53.4 17 0.00059 32.4 5.2 113 190-329 12-135 (152)
57 3lo3_A Uncharacterized conserv 50.7 25 0.00087 28.4 5.5 61 375-459 14-75 (94)
58 1vmd_A MGS, methylglyoxal synt 49.4 15 0.00052 33.6 4.2 120 183-329 20-151 (178)
59 2yvq_A Carbamoyl-phosphate syn 48.3 20 0.00068 31.5 4.8 58 242-299 63-132 (143)
60 2xw6_A MGS, methylglyoxal synt 43.3 8.8 0.0003 33.5 1.6 79 209-299 24-112 (134)
61 3hhl_A RPA0582; alpha-beta-bar 35.2 47 0.0016 29.2 5.1 65 374-459 45-110 (143)
62 3fgh_A Transcription factor A, 27.6 1.5E+02 0.005 21.7 6.1 36 94-129 29-64 (67)
63 2ec4_A FAS-associated factor 1 25.8 38 0.0013 30.9 2.9 49 432-480 25-77 (178)
64 2eqz_A High mobility group pro 21.2 2E+02 0.0068 22.2 6.1 35 95-129 49-83 (86)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1e-110 Score=917.46 Aligned_cols=476 Identities=28% Similarity=0.451 Sum_probs=444.5
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|++|+
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34568999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..|+...|+..+++.++|+++.+++.... ..+. ..+...+++++|+|||++|+|||||+.++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~PwNfP~~~~ 159 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGE-QIPL---RETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEE-EEEE---ETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCc-cccc---cCCcceeEEecceeEEEEeccccCcchhh
Confidence 9999999999999999996667999999999999988765432 2221 13456789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+||||.+|+++.++++++. ++|+|+|++|+|+|++ ++++.|++ +||+|+||||+.+|+
T Consensus 160 ~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~----eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~ 235 (490)
T 2wme_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYT----EAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGK 235 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred hhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHH----HhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHH
Confidence 9999999999999999999999999999888765 5799999999999976 78999998 899999999999998
Q ss_pred HHHH-HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 283 MIMR-NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 283 ~v~~-~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|++ .+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 236 ~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v 315 (490)
T 2wme_A 236 KVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRL 315 (490)
T ss_dssp HHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcC
Confidence 8876 567789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++||||++.++++++++|++++++||++++||.+...+....|+|++|||+.+++++|++++||+||||++|
T Consensus 316 Gdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 395 (490)
T 2wme_A 316 GDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSI 395 (490)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEE
Confidence 99999999999999999999999999999999999999998765444457999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|+||+||+||++||++|
T Consensus 396 ~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PFGG~k~SG~Gre~G~~gl~~f 473 (490)
T 2wme_A 396 LVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHY 473 (490)
T ss_dssp EEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSHHHHHHTT
T ss_pred EEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCC--CCCCCcccccccccCchhHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999987554 34599999999999999999999999
Q ss_pred ceeeEEEEcc
Q 007627 522 CLVKSVVEDR 531 (595)
Q Consensus 522 t~~k~v~~~~ 531 (595)
|+.|+|+++.
T Consensus 474 t~~K~v~i~~ 483 (490)
T 2wme_A 474 TRIKSVQVEL 483 (490)
T ss_dssp EEEEEEEEEC
T ss_pred hceeEEEEEC
Confidence 9999998865
No 2
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=2.9e-105 Score=879.87 Aligned_cols=475 Identities=31% Similarity=0.498 Sum_probs=443.0
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH-----HHhhcCHHHHHHHHHHHHHHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-----VWAKSSFKQRRQFLRILLKYII 122 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~-----~W~~~~~~~R~~~L~~l~~~l~ 122 (595)
..++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||. .|++++..+|.++|++++++|+
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~ 86 (503)
T 3iwj_A 7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVT 86 (503)
T ss_dssp CCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHH
T ss_pred CCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence 35789999999988889999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhh
Q 007627 123 EHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPF 202 (595)
Q Consensus 123 ~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~ 202 (595)
+|+++|++++++|+||+..++. .|+..+++.++|++++++++..+...+......+...++.++|+|||++|+|||||+
T Consensus 87 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T 3iwj_A 87 EKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPM 165 (503)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHH
Confidence 9999999999999999999984 699999999999999988775543222111123456889999999999999999999
Q ss_pred HhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChh
Q 007627 203 HNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPG 279 (595)
Q Consensus 203 ~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~ 279 (595)
.+.++++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.
T Consensus 166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~ 241 (503)
T 3iwj_A 166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICK----EVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHH----HhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHH
Confidence 9999999999999999999999999999998887765 6899999999999976 78999997 899999999999
Q ss_pred HHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhc
Q 007627 280 VGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSV 359 (595)
Q Consensus 280 ~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l 359 (595)
+|+.|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 242 ~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 321 (503)
T 3iwj_A 242 TGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNI 321 (503)
T ss_dssp HHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCce
Q 007627 360 SAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (595)
Q Consensus 360 ~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl 439 (595)
++|+|.++++++|||++++++++++++|++|+++|+++++||.... ....|+|++|||+.+++++|++++||+||||+
T Consensus 322 ~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 399 (503)
T 3iwj_A 322 KISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVL 399 (503)
T ss_dssp CBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred cCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCc--cCCCCceeCCeeeecCCCCchhhCceeeCceE
Confidence 9999999999999999999999999999999999999999997432 12479999999999999999999999999999
Q ss_pred eEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 440 ~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
+|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|.||+|+++|.+||+
T Consensus 400 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~g~~ 477 (503)
T 3iwj_A 400 CVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPC--FTQAPWGGVKRSGFGRELGEWGLD 477 (503)
T ss_dssp EEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCC--CTTSCBCCSGGGEECCBSHHHHHH
T ss_pred EEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcccCCCcchHHHHH
Confidence 999999999999999999999999999999999999999999999999986443 345999999999999999999999
Q ss_pred ccceeeEEEEcc
Q 007627 520 ACCLVKSVVEDR 531 (595)
Q Consensus 520 ~~t~~k~v~~~~ 531 (595)
+||+.|+|+.+.
T Consensus 478 ~f~~~k~v~~~~ 489 (503)
T 3iwj_A 478 NYLSVKQVTQYI 489 (503)
T ss_dssp TTEEEEEEEEEC
T ss_pred HhhCeEEEEEeC
Confidence 999999998754
No 3
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=5.6e-105 Score=878.88 Aligned_cols=473 Identities=28% Similarity=0.466 Sum_probs=442.7
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHH--HHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~--~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
+++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| ..|++++..+|.++|++++++|++|++
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 112 (520)
T 3ed6_A 33 QRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHRE 112 (520)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 568999999998888999999999999999999999999999999999999 889999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++. +|+..+++.++|++..++++... ..+... .+...++.++|+|||++|+|||||+.+.+
T Consensus 113 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~-~~~~~~--~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 113 ALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGE-MIDSPI--PDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEE-EECCSS--TTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCe-ecccCC--CCCcccccccCccEEEEECCCccHHHHHH
Confidence 999999999999999995 69999999999999998876532 222211 24567899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++.++++++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~ 264 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELME----EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKH 264 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHH----HHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHH----HhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 999999999999999999999999998888765 5899999999999964 78999998 8999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 265 i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~ 344 (520)
T 3ed6_A 265 IMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGN 344 (520)
T ss_dssp HHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCC
T ss_pred HHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEe
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~ 443 (595)
|.++++++|||+++.++++++++|++++++||++++||.....+....|+|++|||+.+++++|++++||+||||++|++
T Consensus 345 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 424 (520)
T 3ed6_A 345 GFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEG 424 (520)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEE
Confidence 99999999999999999999999999999999999999853211124799999999999999999999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccce
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~ 523 (595)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.... ..+||||+|+||+||++|++||++||+
T Consensus 425 ~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~--~~~PfGG~k~SG~Gre~G~~gl~~~t~ 502 (520)
T 3ed6_A 425 FETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYF--AQAPWGGYKQSGIGRELGKEGLEEYLV 502 (520)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCC--TTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred eCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCC--CCCCcCCcCcCcCCccchHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999986652 459999999999999999999999999
Q ss_pred eeEEEEcc
Q 007627 524 VKSVVEDR 531 (595)
Q Consensus 524 ~k~v~~~~ 531 (595)
.|+|+.+.
T Consensus 503 ~k~v~~~~ 510 (520)
T 3ed6_A 503 SKHILTNT 510 (520)
T ss_dssp EEEEEEES
T ss_pred eEEEEEcC
Confidence 99998754
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=3.2e-105 Score=878.05 Aligned_cols=472 Identities=28% Similarity=0.457 Sum_probs=443.3
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
...++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 34578999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEE-ecceEEEEEcCcchhhHhh
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEF-HPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~PlGVV~~I~p~N~P~~~~ 205 (595)
+|++++++|+||+..++. +|+..+++.++|++++++++.... .+.. .+...++.+ +|+|||++|+|||||+.++
T Consensus 90 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 164 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHT-IPEK---PKDCTWTVHYRPVGVTGLIVPWNFPIGMI 164 (506)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEE-CSCC---GGGCEEEEEEEECCSEEEECCSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccC---CCceeeEeecccceEEEEECCCchHHHHH
Confidence 999999999999999996 799999999999999999876542 2221 345678888 9999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+
T Consensus 165 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~ 240 (506)
T 3rh9_A 165 AKKLSAALAAGCPSVIKPASETPLTMIAFFSVMD----KLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGR 240 (506)
T ss_dssp HHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHT----TTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHH----HhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 9999999999999999999999999998888765 6899999999999965 78999998 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|+++|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 241 ~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 320 (506)
T 3rh9_A 241 KLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVG 320 (506)
T ss_dssp HHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++|||++++++++++++|++++++||++++||...+ ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 321 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 397 (506)
T 3rh9_A 321 DGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMA 397 (506)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred CCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEEEEE
Confidence 9999999999999999999999999999999999999998421 1279999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+. ..+||||+|+||+|+++|++||++||
T Consensus 398 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft 475 (506)
T 3rh9_A 398 LFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPT--PEAPFGGMKASGIGREGGLEGLFEFV 475 (506)
T ss_dssp EECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCC--TTSCBCCSGGGEESCBSHHHHHTTTE
T ss_pred EeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCC--CCCCccCcCcCcCCcCccHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999986543 35999999999999999999999999
Q ss_pred eeeEEEEccc
Q 007627 523 LVKSVVEDRW 532 (595)
Q Consensus 523 ~~k~v~~~~~ 532 (595)
+.|+|+.+..
T Consensus 476 ~~K~v~~~~~ 485 (506)
T 3rh9_A 476 EAQTVPRGFA 485 (506)
T ss_dssp EEEEEEEC--
T ss_pred ceEEEEEcCc
Confidence 9999987653
No 5
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=5.3e-105 Score=876.56 Aligned_cols=476 Identities=27% Similarity=0.438 Sum_probs=442.6
Q ss_pred CCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 46 PDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
....++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENK 89 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..++. .|+..+++.++|++++++++..+.. +.. ..+...++.++|+|||++|+|||||+.+.
T Consensus 90 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 90 HILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDIL-PSD--NQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEE-ECS--STTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 9999999999999999995 7999999999999999988765422 211 23457889999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~ 241 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAK----EAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGK 241 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHH----HTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHH
Confidence 9999999999999999999999999998888754 6899999999999965 78999998 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 242 ~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg 321 (497)
T 3k2w_A 242 QIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVG 321 (497)
T ss_dssp HHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++|||++++++++++++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|+
T Consensus 322 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~ 401 (497)
T 3k2w_A 322 DPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIV 401 (497)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEE
Confidence 99999999999999999999999999999999999999973111112368999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+. +.+||||+|+||+|+++|++||++||
T Consensus 402 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft 479 (497)
T 3k2w_A 402 KVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQ--HQGFHNGWKQSGFGGEDGKFGLEQYL 479 (497)
T ss_dssp EESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCEETSEESCBSHHHHHHTTE
T ss_pred EeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCC--CCCCcCCcCCCcCCccchHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999986653 45999999999999999999999999
Q ss_pred eeeEEEEcc
Q 007627 523 LVKSVVEDR 531 (595)
Q Consensus 523 ~~k~v~~~~ 531 (595)
+.|+|+.+.
T Consensus 480 ~~k~v~~~~ 488 (497)
T 3k2w_A 480 EKKTVYINE 488 (497)
T ss_dssp EEEEEEEEC
T ss_pred ceEEEEEEc
Confidence 999998754
No 6
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.2e-105 Score=880.04 Aligned_cols=488 Identities=21% Similarity=0.327 Sum_probs=442.7
Q ss_pred cCCCCCCCCCCCCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHH
Q 007627 34 DASDVLDDGNQTPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQF 113 (595)
Q Consensus 34 ~~p~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~ 113 (595)
..-.++-|-.......++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++
T Consensus 12 ~~~~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~ 91 (521)
T 4e4g_A 12 DLGTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARV 91 (521)
T ss_dssp ------------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CcCchhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 33344677777777778999999999888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEE
Q 007627 114 LRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVG 193 (595)
Q Consensus 114 L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~ 193 (595)
|++++++|++|+++|++++++|+||+..++. +|+..+++.++|+++..+. +..+..+. ...+...++.++|+|||+
T Consensus 92 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~-~~~~~~~~--~~~~~~~~~~~~P~GVV~ 167 (521)
T 4e4g_A 92 FMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHL-QKSEFTEG--AGPGIDMYSIRQPVGIGA 167 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHH-TCEEEEEE--EETTEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH-hcCccccc--CCCCcceeEEEcCCcEEE
Confidence 9999999999999999999999999999984 7999999999999876543 33222111 012346789999999999
Q ss_pred EEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCE
Q 007627 194 AIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDK 271 (595)
Q Consensus 194 ~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~ 271 (595)
+|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ +||+
T Consensus 168 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~ 243 (521)
T 4e4g_A 168 GITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMI----EAGLPAGILNVVNGDKGAVDAILTHPDIAA 243 (521)
T ss_dssp EECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HhCCCcCeEEEEeCChHHHHHHHhCCCcCE
Confidence 9999999999999999999999999999999999999998888765 689999999999998888899998 8999
Q ss_pred EEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccc-hHHHHHH
Q 007627 272 IIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVS 350 (595)
Q Consensus 272 I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~-v~d~f~~ 350 (595)
|+||||+.+|+.|+++|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|++
T Consensus 244 I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~ 323 (521)
T 4e4g_A 244 VSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLID 323 (521)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCccc
Q 007627 351 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 430 (595)
Q Consensus 351 ~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~ 430 (595)
+|+++++++++|+|.++++++|||++++++++++++|++++++||++++||.+...+.+..|+|++|||+.+++++|+++
T Consensus 324 ~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~ 403 (521)
T 4e4g_A 324 KLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIY 403 (521)
T ss_dssp HHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHH
T ss_pred HHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhh
Confidence 99999999999999999999999999999999999999999999999999975432233579999999999999999999
Q ss_pred ccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC
Q 007627 431 QEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG 510 (595)
Q Consensus 431 ~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G 510 (595)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... ..+.+||||+|+||+|
T Consensus 404 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~k~SG~G 482 (521)
T 4e4g_A 404 KTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPV-PLAYHSFGGWKSSSFG 482 (521)
T ss_dssp HSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCC-CCTTSCBCCEETTEES
T ss_pred cCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCC-CCCCCCcCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999997543 3355999999999999
Q ss_pred --CCCcHHHHhccceeeEEEEc
Q 007627 511 --RFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 511 --~~~G~~gl~~~t~~k~v~~~ 530 (595)
+++|++||++||+.|+|+.+
T Consensus 483 ~~~~~G~~gl~~ft~~K~v~~~ 504 (521)
T 4e4g_A 483 DLNQHGTDSIKFWTRTKTITSR 504 (521)
T ss_dssp SCCBSHHHHHHHTEEEEEEEEC
T ss_pred CCccchHHHHHHhheEEEEEEe
Confidence 79999999999999999875
No 7
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=6e-105 Score=872.81 Aligned_cols=468 Identities=30% Similarity=0.519 Sum_probs=438.3
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|++++++|++|+++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. +|+..+++.++|++..+++.... ..+.. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 92 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 167 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGD-TLPTP--DANKRIVVVKEPIGVCAAITPWNFPAAMIAR 167 (484)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEE-EECCS--STTEEEEEEEEECSSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCc-ccccc--CCCceeEEEecCCcEEEEECCCcChHHHHHH
Confidence 99999999999999984 79999999999999887764322 11111 1245678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|
T Consensus 168 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i 243 (484)
T 3ifg_A 168 KVGPALAAGCPIVVKPAESTPFSALAMAFLAE----RAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLL 243 (484)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999998888765 6899999999999965 78999998 89999999999999999
Q ss_pred HHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCC
Q 007627 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (595)
Q Consensus 285 ~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (595)
++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 244 ~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 323 (484)
T 3ifg_A 244 MAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRG 323 (484)
T ss_dssp HHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 365 ~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
.++++++|||+++.++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 399 (484)
T 3ifg_A 324 TESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH----ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRF 399 (484)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcc----CCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEe
Confidence 9999999999999999999999999999999999999842 237999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|+||+||++|++||++||+.
T Consensus 400 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~--~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~ 477 (484)
T 3ifg_A 400 ASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLIS--NEVAPFGGVKQSGLGREGSHYGIDDYVVI 477 (484)
T ss_dssp CCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC--CSSSCBCCEETTEECCBSTTTTTGGGEEE
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--CCCCCcCCcCcCcCCCCchHHHHHHhhce
Confidence 9999999999999999999999999999999999999999999986432 34699999999999999999999999999
Q ss_pred eEEEE
Q 007627 525 KSVVE 529 (595)
Q Consensus 525 k~v~~ 529 (595)
|+|+.
T Consensus 478 k~v~~ 482 (484)
T 3ifg_A 478 KYLCV 482 (484)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99875
No 8
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=8.3e-105 Score=871.47 Aligned_cols=461 Identities=28% Similarity=0.443 Sum_probs=430.6
Q ss_pred cccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHH
Q 007627 51 IYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICE 130 (595)
Q Consensus 51 ~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~ 130 (595)
+||+|+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999875 45 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHH
Q 007627 131 ISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPML 210 (595)
Q Consensus 131 ~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~ 210 (595)
++++|+||+..++. +|+..+++.++|++++++++.... .+.+ +...++.++|+|||++|+|||||+.+.+++++
T Consensus 79 ~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~-~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 152 (486)
T 3pqa_A 79 ILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEV-IPSD----DRLIFTRREPVGIVGAITPFNFPLNLSAHKIA 152 (486)
T ss_dssp HHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEE-ECCT----TEEEEEEEEECSEEEEEECSSSHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCce-ecCC----CceeEEEEccccEEEEECCCchHHHHHHHHHH
Confidence 99999999999985 799999999999999998875432 2221 45788999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHH
Q 007627 211 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (595)
Q Consensus 211 ~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~ 287 (595)
+||++||+||+|||+.+|+++.++++++.+++.++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|++.
T Consensus 153 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~ 232 (486)
T 3pqa_A 153 PAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKK 232 (486)
T ss_dssp HHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999976 56899997 89999999999999999999
Q ss_pred hhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCC
Q 007627 288 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 367 (595)
Q Consensus 288 aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~ 367 (595)
|+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++
T Consensus 233 aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 310 (486)
T 3pqa_A 233 AG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDE 310 (486)
T ss_dssp CC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred cC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcC
Confidence 88 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCH
Q 007627 368 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD 447 (595)
Q Consensus 368 ~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 447 (595)
++++|||++++++++++++|++++++|+++++||. ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 311 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~-------~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~- 381 (486)
T 3pqa_A 311 KTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE- 381 (486)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-
Confidence 99999999999999999999999999999999997 25899999999 9999999999999999999999999
Q ss_pred HHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEE
Q 007627 448 EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 527 (595)
Q Consensus 448 ~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v 527 (595)
||||+++|+++|||++||||+|.++++++++++++|+|+||++..+... .+||||+|+||+||++|++||++||+.|+|
T Consensus 382 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~-~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v 460 (486)
T 3pqa_A 382 EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQD-NMPFGGVKKSGLGREGVKYAMEEMSNIKTI 460 (486)
T ss_dssp HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCT-TSCBCCSGGGEESCBSHHHHHHHTEEEEEE
T ss_pred HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCC-CCCCCCcCcCcCCCCCcHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999998664333 699999999999999999999999999999
Q ss_pred EEccc
Q 007627 528 VEDRW 532 (595)
Q Consensus 528 ~~~~~ 532 (595)
+.+..
T Consensus 461 ~~~~~ 465 (486)
T 3pqa_A 461 IISKA 465 (486)
T ss_dssp EEEC-
T ss_pred EEcCC
Confidence 88653
No 9
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5.1e-105 Score=878.65 Aligned_cols=470 Identities=29% Similarity=0.425 Sum_probs=439.6
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+++
T Consensus 14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 93 (517)
T 3r31_A 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDA 93 (517)
T ss_dssp SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 36789999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchh---hcCcccccCCcccccccceEEEecceEEEEEcCcchhhHh
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK---WLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~ 204 (595)
|++++++|+||+..++ |+..+++.++|+++.+++ ++..+..+.. .+. .+++++|+|||++|+|||||+.+
T Consensus 94 la~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~---~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 94 LSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLG---GDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS---SSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccC---CCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999987 999999999999988776 3433333221 234 88999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHH
Q 007627 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 205 ~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
+++++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|+.+.+++|++ +||+|+||||+.+|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~----eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~ 242 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILI----EAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGR 242 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHH----HTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHH----HhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHH
Confidence 99999999999999999999999999998888765 689999999999996688999998 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|+++|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 243 ~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 243 KVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++|||++++++++++++|++++++|+++++|| +........|+|++|||+.+++++|++++||+||||++|+
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 401 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVL 401 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEE
Confidence 999999999999999999999999999999999999999 4111113479999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|.||+|+++|++||++||
T Consensus 402 ~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft 479 (517)
T 3r31_A 402 DFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLC--PVEIPFGGSKQSGFGRENSAAALEHYS 479 (517)
T ss_dssp EECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCC--CTTSCBCCEETTEECCBSTGGGGGGSE
T ss_pred EeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhh
Confidence 999999999999999999999999999999999999999999999997543 346999999999999999999999999
Q ss_pred eeeEEEEcc
Q 007627 523 LVKSVVEDR 531 (595)
Q Consensus 523 ~~k~v~~~~ 531 (595)
+.|+|+.+.
T Consensus 480 ~~K~v~~~~ 488 (517)
T 3r31_A 480 ELKTVYVST 488 (517)
T ss_dssp EEEEEEECC
T ss_pred ceEEEEEcC
Confidence 999998765
No 10
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.1e-104 Score=873.37 Aligned_cols=467 Identities=28% Similarity=0.483 Sum_probs=438.2
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++|+++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. +|+..+++.++|++...++..... .+.. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 112 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~-~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 187 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDT-IPAP--QNGQRLTVIRQPVGVTAAITPWNFPAAMITR 187 (504)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEE-ECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-cccc--cccccceeeccCceEEEEECCCcchHHHHHH
Confidence 99999999999999984 699999999999998877643221 1111 1245678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+.+|+.|
T Consensus 188 ~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~----eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i 263 (504)
T 3ek1_A 188 KAAPALAAGCTMIVRPADLTPLTALALGVLAE----KAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLL 263 (504)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHH----HhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999998887755 6899999999999875 78999998 89999999999999999
Q ss_pred HHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCC
Q 007627 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (595)
Q Consensus 285 ~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (595)
++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 264 ~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 343 (504)
T 3ek1_A 264 MAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNG 343 (504)
T ss_dssp HHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 365 ~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
.++++++|||+++.++++++++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 344 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 417 (504)
T 3ek1_A 344 TEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAF 417 (504)
T ss_dssp TSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEE
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 36899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|+||+|+++|++||++||+.
T Consensus 418 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~ 495 (504)
T 3ek1_A 418 DTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLIS--NEVAPFGGVKQSGLGREGSKYGIEEYLET 495 (504)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCC--CSSSCBCCSGGGEESCBSTTTSGGGGEEE
T ss_pred CCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC--CCCCCcCCcCcCcCCCCCcHHHHHHhhce
Confidence 9999999999999999999999999999999999999999999986532 34699999999999999999999999999
Q ss_pred eEEEEc
Q 007627 525 KSVVED 530 (595)
Q Consensus 525 k~v~~~ 530 (595)
|+|+.+
T Consensus 496 K~v~~~ 501 (504)
T 3ek1_A 496 KYICSA 501 (504)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999864
No 11
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2.3e-104 Score=871.82 Aligned_cols=466 Identities=30% Similarity=0.465 Sum_probs=436.4
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|++++.++|.++|++++++|++|+++|
T Consensus 12 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 91 (505)
T 3prl_A 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEII 91 (505)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccc---cccceEEEecceEEEEEcCcchhhHhh
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI---HKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++++++|+||+..++. +|+..+++.++|++++++++.... .+...... +...++.++|+|||++|+|||||+.+.
T Consensus 92 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 92 GELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGET-LKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEE-EEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcc-ccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 9999999999999985 699999999999999988865422 22110000 345789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++.+++ .++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll----~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 245 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEAL----ADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE 245 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHH----HHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 999999999999999999999999998887765 46899999999999965 78999998 899999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|++.|+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 246 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 246 RISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999998 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|. +++++|||++++++++++++|++++++|+++++||. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~-------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~ 395 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNK-------RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPII 395 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEE
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCceeCCeEeecCCCCChhhcCCccCcEEEEE
Confidence 999 999999999999999999999999999999999997 368999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.... .+.+||||+|+||+||++|++||++||
T Consensus 396 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~~~~PFGG~k~SG~Gr~~g~~~~~~f~ 474 (505)
T 3prl_A 396 RVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERG-PDHFPFLGVKKSGLGVQGIKPSLLSMT 474 (505)
T ss_dssp EESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSC-STTSCBCCEETTEESCBSHHHHHHHTE
T ss_pred EeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCC-CCCCCcCCcCcCCCCcCccHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999986533 356999999999999999999999999
Q ss_pred eeeEEEEcc
Q 007627 523 LVKSVVEDR 531 (595)
Q Consensus 523 ~~k~v~~~~ 531 (595)
+.|+|+.+.
T Consensus 475 ~~k~v~~~~ 483 (505)
T 3prl_A 475 RERVTVLNL 483 (505)
T ss_dssp EEEEEEEEC
T ss_pred ceEEEEEeC
Confidence 999998764
No 12
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=5e-104 Score=869.41 Aligned_cols=474 Identities=30% Similarity=0.458 Sum_probs=441.0
Q ss_pred CCCcccccCCcccCCCCCCe-EEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 007627 46 PDNSFIYIPPRGRTPQSETK-VQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (595)
Q Consensus 46 ~~~~~~~i~g~~~~~~~~~~-~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~ 124 (595)
....++||+|+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 96 (503)
T 1a4s_A 17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRER 96 (503)
T ss_dssp CCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence 34467899999998777778 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHh
Q 007627 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (595)
Q Consensus 125 ~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~ 204 (595)
+++|++++++|+||+..++ .+|+..+++.++|++++++++.. +..+.. .+...++.++|+|||++|+|||||+.+
T Consensus 97 ~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g-~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~ 171 (503)
T 1a4s_A 97 RDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSG-QHIQLP---GGAFAYTRREPLGVCAGILAWNYPFMI 171 (503)
T ss_dssp HHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCE-EEEECG---GGCEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-CcccCC---CCceeEEEEecCceEEEECCCcchHHH
Confidence 9999999999999999998 57999999999999999988754 222221 234678999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHH
Q 007627 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 205 ~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
.++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|.++.+++|++ ++|+|+||||+.+|+
T Consensus 172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~----~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~ 247 (503)
T 1a4s_A 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFH----EAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGK 247 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 99999999999999999999999999999888765 689999999999995577899998 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 248 ~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 327 (503)
T 1a4s_A 248 KVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVG 327 (503)
T ss_dssp HHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCC--CCCCcccCCeeeecCCCCCcccccccccCcee
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE--GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
+|.++++++|||++++++++++++|++++++|+++++||.....+. ...|+|++|||+.+++++|++++||+||||++
T Consensus 328 ~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 407 (503)
T 1a4s_A 328 DPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMS 407 (503)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEE
Confidence 9999999999999999999999999999999999999997421000 03589999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhc
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~ 520 (595)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|+||+|+++|++||++
T Consensus 408 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ 485 (503)
T 1a4s_A 408 VLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSIS--PVEVPFGGYKMSGFGRENGQATVDY 485 (503)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSTTGGGGG
T ss_pred EEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999997653 3458999999999999999999999
Q ss_pred cceeeEEEEc
Q 007627 521 CCLVKSVVED 530 (595)
Q Consensus 521 ~t~~k~v~~~ 530 (595)
||+.|+|+.+
T Consensus 486 f~~~k~v~~~ 495 (503)
T 1a4s_A 486 YSQLKTVIVE 495 (503)
T ss_dssp SEEEEEEEEC
T ss_pred hcCceEEEEc
Confidence 9999999875
No 13
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.8e-104 Score=871.30 Aligned_cols=469 Identities=25% Similarity=0.411 Sum_probs=440.4
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
...++||+|+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|++++++|++|++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEAD 102 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 44679999999988766 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++..+|+..+++.++|+++.++++... ..+.. ..+...++.++|+|||++|+|||||+.+++
T Consensus 103 ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (498)
T 4f3x_A 103 EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAP-AAGEY--LPGHTSMIRRDPIGIVGSIAPWNYPLMMMA 179 (498)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEE-CBEEE--ETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCc-cccCC--cccccceEEEcCcceEEEECCCchHHHHHH
Confidence 999999999999999995589999999999999998875432 22111 134568899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.
T Consensus 180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~----ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~ 254 (498)
T 4f3x_A 180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIA----DI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKK 254 (498)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----TT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHH----Hh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 999999999999999999999999999888876 46 9999999999965 68999998 8999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 255 i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (498)
T 4f3x_A 255 VLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNL 334 (498)
T ss_dssp HHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCC-eEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGA-EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga-~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
|.++++++|||+++.++++++++|++++++|+ ++++||... ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 335 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 410 (498)
T 4f3x_A 335 DDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVT 410 (498)
T ss_dssp SSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCceeCcEEEEE
Confidence 99999999999999999999999999999999 999999842 2479999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+. +.+||||+|+||+||++|++||++||
T Consensus 411 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~--~~~PfGG~k~SG~Gr~~G~~~l~~~t 488 (498)
T 4f3x_A 411 RFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLT--NEMPHGGIKQSGYGKDMSVYALEDYT 488 (498)
T ss_dssp EECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC--TTSCBCCSGGGEECCBSHHHHHHHTE
T ss_pred EeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC--CCCCcCCcCcCCcCccchHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999986654 45999999999999999999999999
Q ss_pred eeeEEEEc
Q 007627 523 LVKSVVED 530 (595)
Q Consensus 523 ~~k~v~~~ 530 (595)
+.|+|+.+
T Consensus 489 ~~k~v~~~ 496 (498)
T 4f3x_A 489 AVRHIMIN 496 (498)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEe
Confidence 99999764
No 14
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=4.5e-104 Score=871.07 Aligned_cols=470 Identities=26% Similarity=0.437 Sum_probs=438.4
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++|++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3579999999876678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcc-cccccceEEEecceEEEEEcCcchhhHhh
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRS-MIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
+|++++++|+||+..++..+|+..+++.++|+++.++++.... .+.... ......++.++|+|||++|+|||||+.++
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 195 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT-IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMML 195 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEE-ECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-ccccccCCCCceEEEEecCCccEEEECCCcchHHHH
Confidence 9999999999999999865799999999999999988865432 222100 11235689999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|.+ +.+++|++ +||+|+||||+.+|+
T Consensus 196 ~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~ 271 (517)
T 2o2p_A 196 SWKTAACLAAGNTVVIKPAQVTPLTALKFAELTL----KAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGK 271 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----HTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHH----HhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHH
Confidence 9999999999999999999999999998888765 6899999999999965 78999998 899999999999999
Q ss_pred HHHHHhh-cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 283 ~v~~~aa-~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|++.|+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 ~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~v 351 (517)
T 2o2p_A 272 HIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKI 351 (517)
T ss_dssp HHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++||||+++++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|
T Consensus 352 Gdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 427 (517)
T 2o2p_A 352 GNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV----PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMII 427 (517)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEE
T ss_pred CCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccC----CCCCCeECCEEEeCCCCCChhhhccccccEEEE
Confidence 9999999999999999999999999999999999999999742 136999999999999999999999999999999
Q ss_pred EeeCC--HHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 442 MKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 442 ~~~~~--~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
++|+| +||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+||++|.+||+
T Consensus 428 ~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~~l~ 505 (517)
T 2o2p_A 428 SRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKT--DVAAPFGGFKQSGFGKDLGEAALN 505 (517)
T ss_dssp EEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCC--CTTSCBCCCGGGEECCBSHHHHHH
T ss_pred EEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCC--CCCCCcCCcCcCCcCccChHHHHH
Confidence 99999 99999999999999999999999999999999999999999987443 345999999999999999999999
Q ss_pred ccceeeEEEE
Q 007627 520 ACCLVKSVVE 529 (595)
Q Consensus 520 ~~t~~k~v~~ 529 (595)
+||+.|+|+.
T Consensus 506 ~~~~~k~v~~ 515 (517)
T 2o2p_A 506 EYLRIKTVTF 515 (517)
T ss_dssp TTEEEEEEEE
T ss_pred HhCCceEEEe
Confidence 9999999975
No 15
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=8.8e-104 Score=866.39 Aligned_cols=468 Identities=28% Similarity=0.461 Sum_probs=439.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~---~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|++++..+|.++|++++++|++|+
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999887778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..|+..+|+..+++.++|++++++++..+. .+.. .+...++.++|+|||++|+|||||+.++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 176 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRT-IPMD---GNFFTYTRSEPVGVCGQIIPWNFPLLMF 176 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCe-eecc---CCcceeEEecCCceEEEECCCcchHHHH
Confidence 99999999999999998877899999999999999998876542 2211 2345789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|.+ +.+++|++ ++|+|+||||+.+|+
T Consensus 177 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 252 (501)
T 1bxs_A 177 LWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIK----EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGK 252 (501)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHH----HhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 9999999999999999999999999998888765 6899999999999954 78999998 799999999999999
Q ss_pred HHHHHhh-cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 283 ~v~~~aa-~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|++.|+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 253 ~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 332 (501)
T 1bxs_A 253 LIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVL 332 (501)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCB
T ss_pred HHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++|||++++++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|
T Consensus 333 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 408 (501)
T 1bxs_A 333 GNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 408 (501)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceEEE
Confidence 9999999999999999999999999999999999999999742 136899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|.||+|+++|++|+++|
T Consensus 409 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~pfGG~k~SG~G~~~G~~~l~~f 486 (501)
T 1bxs_A 409 MKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV--SAQCPFGGFKMSGNGRELGEYGFHEY 486 (501)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHHTT
T ss_pred EEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC--CCCCCCCCcCcCCcCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999997543 24599999999999999999999999
Q ss_pred ceeeEEEEc
Q 007627 522 CLVKSVVED 530 (595)
Q Consensus 522 t~~k~v~~~ 530 (595)
++.|+|+.+
T Consensus 487 ~~~K~v~~~ 495 (501)
T 1bxs_A 487 TEVKTVTIK 495 (501)
T ss_dssp EEEEEEEEE
T ss_pred hCeeEEEEc
Confidence 999999864
No 16
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=8.9e-104 Score=865.56 Aligned_cols=467 Identities=28% Similarity=0.449 Sum_probs=436.1
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|++++++|++|+++
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 104 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSD 104 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999988888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEE-EecceEEEEEcCcchhhHhhH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVE-FHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~PlGVV~~I~p~N~P~~~~~ 206 (595)
|++++++|+||+..++..+|+..+++.++++++....+..+...+ .+...++. ++|+|||++|+|||||+.+.+
T Consensus 105 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (497)
T 3i44_A 105 MAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-----EGNEQAILHYDAIGVVGLITPWNWPMNQVT 179 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-----TTCSSCEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----CCceeEEEeecCceEEEEECCCcchHHHHH
Confidence 999999999999999965899999999999999887765433221 13446788 999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.
T Consensus 180 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~ 255 (497)
T 3i44_A 180 LKVIPALLAGCTMVLKPSEIAPLSAMLFAEILD----EAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKD 255 (497)
T ss_dssp HHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCcccHHHHHHHHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence 999999999999999999999999998888755 6899999999999965 78999998 8999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.|++++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 256 i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (497)
T 3i44_A 256 ISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334 (497)
T ss_dssp HHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEe
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~ 443 (595)
|.++++++|||+++.++++++++|++++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++
T Consensus 335 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 413 (497)
T 3i44_A 335 GHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM-GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLP 413 (497)
T ss_dssp TTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCT-TCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-cCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEe
Confidence 9999999999999999999999999999999999999942111 123699999999999999999999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccce
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~ 523 (595)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+. . ..+.+||||+|.||+||++|++||++||+
T Consensus 414 ~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~-~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~ 490 (497)
T 3i44_A 414 FNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGH-E--LPGGSYFGGVKFSGRAREGGLWGIKEFLD 490 (497)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETTC-C--CCTTCCBCCSGGGCCCCBSHHHHHHTTEE
T ss_pred cCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECCC-C--CCCCCCcCCcCcCcCCccchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999952 2 23459999999999999999999999999
Q ss_pred eeEEE
Q 007627 524 VKSVV 528 (595)
Q Consensus 524 ~k~v~ 528 (595)
.|+|+
T Consensus 491 ~K~v~ 495 (497)
T 3i44_A 491 TKAIS 495 (497)
T ss_dssp EEEES
T ss_pred eeEEE
Confidence 99985
No 17
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=4.7e-104 Score=868.38 Aligned_cols=468 Identities=30% Similarity=0.453 Sum_probs=439.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK---VWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~---~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
.++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|++++.++|.++|++++++|++|+
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 3589999999887778999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..|+...|+..+++.++|++++++++..+. .+.. .+...++.++|+|||++|+|||||+.++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 175 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKT-IPID---GDFFSYTRHEPVGVCGQIIPWNFPLLMQ 175 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEE-ECCS---SSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc-eecC---CCceEEEEEecCCcEEEECCCCchHHHH
Confidence 99999999999999998877899999999999999998876542 2211 2345789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|.+ +.+++|++ ++|+|+||||+.+|+
T Consensus 176 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~ 251 (500)
T 1o04_A 176 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIK----EAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 251 (500)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH----HhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 9999999999999999999999999998888765 6899999999999954 78999998 799999999999999
Q ss_pred HHHHHhh-cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 283 MIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 283 ~v~~~aa-~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
.|++.|+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 252 ~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 331 (500)
T 1o04_A 252 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVV 331 (500)
T ss_dssp HHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
|+|.++++++||||+++++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|
T Consensus 332 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 407 (500)
T 1o04_A 332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407 (500)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEEEE
Confidence 9999999999999999999999999999999999999999742 136899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ...+||||+|.||+|+++|.+||++|
T Consensus 408 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~f 485 (500)
T 1o04_A 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF--GAQSPFGGYKMSGSGRELGEYGLQAY 485 (500)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC--CTTSCBCCSGGGEESCBSTGGGGGGG
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999997543 24599999999999999999999999
Q ss_pred ceeeEEEEc
Q 007627 522 CLVKSVVED 530 (595)
Q Consensus 522 t~~k~v~~~ 530 (595)
++.|+|+.+
T Consensus 486 ~~~K~v~~~ 494 (500)
T 1o04_A 486 TEVKTVTVK 494 (500)
T ss_dssp EEEEEEEEE
T ss_pred cceEEEEEe
Confidence 999999865
No 18
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.1e-104 Score=867.70 Aligned_cols=468 Identities=30% Similarity=0.508 Sum_probs=438.8
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH--HHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK--VWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|..+|.++|++++++|++|+++
T Consensus 10 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (495)
T 3b4w_A 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDL 89 (495)
T ss_dssp SEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999887778999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++..+|+..+++.++|++++++++.... .+.+ .+...++.++|+|||++|+|||||+.++++
T Consensus 90 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~-~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 165 (495)
T 3b4w_A 90 FTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE-TRTG---SYGQSIVSREPVGVVGAIVAWNVPLFLAVN 165 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEE-EEEE---TTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCC---CCceEEEEEccCceEEEECCCcchHHHHHH
Confidence 999999999999999865799999999999999998876532 2211 233568999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|+
T Consensus 166 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~ 241 (495)
T 3b4w_A 166 KIAPALLAGCTIVLKPAAETPLTANALAEVFA----EVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVG 241 (495)
T ss_dssp HHHHHHHTTCEEEEECBTTSCHHHHHHHHHHH----HTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCEEEEecCCccHHHHHHHHHHHH----HhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999888766 589999999999995578999998 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 242 ~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 321 (495)
T 3b4w_A 242 RRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPS 321 (495)
T ss_dssp HHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTT
T ss_pred HHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++|||++++++++++++|++++++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 399 (495)
T 3b4w_A 322 DPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYD 399 (495)
T ss_dssp CTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred cCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecC
Confidence 99999999999999999999999999999999999974210 1268999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||++. . .+.+||||+|.||+||++|++||++||+.|
T Consensus 400 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~--~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k 476 (495)
T 3b4w_A 400 TEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-F--DPGSPFGGYKNSGIGRENGPEGVEHFTQQK 476 (495)
T ss_dssp SHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-C--CTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred CHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-C--CCCCCCCCCCCCCcCccchHHHHHHhccee
Confidence 9999999999999999999999999999999999999999999875 2 346999999999999999999999999999
Q ss_pred EEEEc
Q 007627 526 SVVED 530 (595)
Q Consensus 526 ~v~~~ 530 (595)
+|+.+
T Consensus 477 ~v~~~ 481 (495)
T 3b4w_A 477 SVLLP 481 (495)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 99764
No 19
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.2e-104 Score=872.65 Aligned_cols=470 Identities=29% Similarity=0.440 Sum_probs=442.0
Q ss_pred cccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHH--HHHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQ--KVWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~--~~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
.++||+|+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| ..|++++.++|.++|++++++|++|+
T Consensus 23 ~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (528)
T 3u4j_A 23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQ 102 (528)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 5789999999988889999999999 99999999999999999999999999 78999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..++ .+|+..+++.++|++++++++.. +..+.. ..+...++.++|+|||++|+|||||+.+.
T Consensus 103 ~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 103 EELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEG-QTHNNI--GDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCE-EEECCS--CTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-eeeccC--CCCceeEEEeccceEEEEECCCccHHHHH
Confidence 999999999999999999 78999999999999999888653 222221 12456889999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|+||+|+|.+ +.+++|++ +||+|+||||+.+|+
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 254 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAR----EAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGT 254 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----HHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 9999999999999999999999999999888765 5799999999999954 78999998 899999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 362 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G 362 (595)
.|++.|++++||+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 255 ~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 334 (528)
T 3u4j_A 255 KLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFG 334 (528)
T ss_dssp HHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEE
T ss_pred HHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEE
Q 007627 363 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIM 442 (595)
Q Consensus 363 ~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~ 442 (595)
+|.++++++||+++++++++++++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 335 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 411 (528)
T 3u4j_A 335 DPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIG---REAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTL 411 (528)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEEC---TTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC---CCCCcEecceEEecCCCCCccccceeeccEEEEE
Confidence 9999999999999999999999999999999999999998421 1179999999999999999999999999999999
Q ss_pred eeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccc
Q 007627 443 KFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 522 (595)
Q Consensus 443 ~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t 522 (595)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||+|.||+||++|++||++||
T Consensus 412 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft 489 (528)
T 3u4j_A 412 TFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG--TPELPIGGYKKSGLGRELGRYGFDEYS 489 (528)
T ss_dssp EESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSTTHHHHHTE
T ss_pred EeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhh
Confidence 999999999999999999999999999999999999999999999997544 346999999999999999999999999
Q ss_pred eeeEEEEcc
Q 007627 523 LVKSVVEDR 531 (595)
Q Consensus 523 ~~k~v~~~~ 531 (595)
+.|+|+.+.
T Consensus 490 ~~K~v~~~~ 498 (528)
T 3u4j_A 490 QFKGVHVTL 498 (528)
T ss_dssp EEEEEEEES
T ss_pred ceEEEEEeC
Confidence 999998754
No 20
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.2e-103 Score=866.48 Aligned_cols=471 Identities=23% Similarity=0.350 Sum_probs=439.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
+.+||+|+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++|+++|
T Consensus 24 ~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 101 (500)
T 2j6l_A 24 NEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVL 101 (500)
T ss_dssp EECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999994 5678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++ .+|+..+++.++|++++++++... ..+.. ..+...++.++|+|||++|+|||||+.+++++
T Consensus 102 a~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (500)
T 2j6l_A 102 GSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGP-ILPSE--RSGHALIEQWNPVGLVGIITAFNFPVAVYGWN 177 (500)
T ss_dssp HHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCB-EECCS--STTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceeEEEEecccEEEEECCCcchhhHHHHH
Confidence 999999999999998 689999999999999888765432 11111 01234578899999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
+++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|++
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~ 257 (500)
T 2j6l_A 178 NAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257 (500)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996688999997 9999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLA 366 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~ 366 (595)
.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+
T Consensus 258 ~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 337 (500)
T 2j6l_A 258 MVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWD 337 (500)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCC
Q 007627 367 GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT 446 (595)
Q Consensus 367 ~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~ 446 (595)
+++++|||++++++++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 338 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (500)
T 2j6l_A 338 PNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVM----DRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQN 413 (500)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECC
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCccc----CCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCC
Confidence 99999999999999999999999999999999999742 23689999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCceeEEecCcHHHHHHHH--HHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 447 DEEVVKLANDSRYGLGCAVFSGSQHRAREIA--AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 447 ~~eAi~~aN~~~~gL~asVft~d~~~~~~~~--~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+||||+++|+++|||++||||+|.+++++++ +++++|+|+||+.... ....+||||+|.||+|+++|.+|+++|++.
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~ 492 (500)
T 2j6l_A 414 EEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKHTGGGRESGSDAWKQYMRR 492 (500)
T ss_dssp HHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTC-CCTTSEECCSGGGCSCCEESTTGGGGGEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCcc-CCCCCCcCCcCCCCCCCcchHHHHHHhhce
Confidence 9999999999999999999999999999999 7799999999986543 234589999999999999999999999999
Q ss_pred eEEEEc
Q 007627 525 KSVVED 530 (595)
Q Consensus 525 k~v~~~ 530 (595)
|+|+.+
T Consensus 493 k~v~~~ 498 (500)
T 2j6l_A 493 STCTIN 498 (500)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999763
No 21
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=2.2e-103 Score=861.19 Aligned_cols=468 Identities=28% Similarity=0.439 Sum_probs=439.7
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEI 86 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998777789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..|+. +|+..+++.++|++++++++..+.. +.. ..+...++.++|+|||++|+|||||+.+++++
T Consensus 87 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 87 SALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEII-QSD--RPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEE-CCS--STTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcc-ccC--CCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999985 7999999999999999888765432 211 12346789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|+
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 238 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVD----EIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM 238 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHH----HhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999888765 5799999999999975 67899997 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 239 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 318 (479)
T 2imp_A 239 ATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318 (479)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 366 A-GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 366 ~-~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
+ +++++|||+++.++++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~ 394 (479)
T 2imp_A 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF 394 (479)
T ss_dssp TCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCC----CSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEE
T ss_pred ccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCccc----CCCCceECCEEEeCCCCCCHHHhCccCCceEEEEee
Confidence 8 89999999999999999999999999999999999742 136899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ .+.+||||+|+||+|+++|++||++||+.
T Consensus 395 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~ 472 (479)
T 2imp_A 395 DTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQT 472 (479)
T ss_dssp SSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEE
T ss_pred CCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCe
Confidence 9999999999999999999999999999999999999999999997665 34699999999999999999999999999
Q ss_pred eEEEEc
Q 007627 525 KSVVED 530 (595)
Q Consensus 525 k~v~~~ 530 (595)
|+|+.+
T Consensus 473 k~v~~~ 478 (479)
T 2imp_A 473 QVVYLQ 478 (479)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 999764
No 22
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.3e-103 Score=863.76 Aligned_cols=470 Identities=26% Similarity=0.429 Sum_probs=436.7
Q ss_pred CCCCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 007627 45 TPDNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH 124 (595)
Q Consensus 45 ~~~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~ 124 (595)
.+...++||+|+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|
T Consensus 20 ~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (495)
T 1wnd_A 20 GLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEEN 98 (495)
T ss_dssp --CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 334456899999998766 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHh
Q 007627 125 QELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHN 204 (595)
Q Consensus 125 ~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~ 204 (595)
+++|++++++|+||+..++...|+..+++.++|++++++++.. +..+.. ..+...++.++|+|||++|+|||||+.+
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g-~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 175 (495)
T 1wnd_A 99 GQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG-LAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMM 175 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEE-ECBEEE--ETTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccccCC--CCCceeEEeeecCCeEEEECCCcchHHH
Confidence 9999999999999999998544999999999999999887643 222211 1234578999999999999999999999
Q ss_pred hHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHH
Q 007627 205 IFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVG 281 (595)
Q Consensus 205 ~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g 281 (595)
+++++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|.+ +.+++|++ ++|+|+||||+.+|
T Consensus 176 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 250 (495)
T 1wnd_A 176 AAWKLAPALAAGNCVVLKPSEITPLTALKLAELAK----DI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250 (495)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHT----TT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred HHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHH----Hh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence 99999999999999999999999999999988876 46 9999999999954 78999998 79999999999999
Q ss_pred HHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC
Q 007627 282 RMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 361 (595)
Q Consensus 282 ~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~ 361 (595)
+.|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 251 ~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 330 (495)
T 1wnd_A 251 EHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKS 330 (495)
T ss_dssp HHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcC-CeEeecCC-CCCCCCCCCCcccCCeeeecCCCCCcccccccccCce
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGS-FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIM 439 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~G-a~vl~gG~-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl 439 (595)
|+|.++++++|||+++.++++++++|++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||+
T Consensus 331 g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 405 (495)
T 1wnd_A 331 GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVV 405 (495)
T ss_dssp CCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred CCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceE
Confidence 999999999999999999999999999999999 99999997 31 268999999999999999999999999999
Q ss_pred eEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 440 ~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
+|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+||++|++||+
T Consensus 406 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~ 483 (495)
T 1wnd_A 406 SVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLE 483 (495)
T ss_dssp EEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC--CTTSCBCCSGGGEECCBSHHHHHH
T ss_pred EEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCCCCCCcCcCCccchHHHHH
Confidence 999999999999999999999999999999999999999999999999997543 346999999999999999999999
Q ss_pred ccceeeEEEEc
Q 007627 520 ACCLVKSVVED 530 (595)
Q Consensus 520 ~~t~~k~v~~~ 530 (595)
+||+.|+|+.+
T Consensus 484 ~f~~~k~v~~~ 494 (495)
T 1wnd_A 484 DYTVVRHVMVK 494 (495)
T ss_dssp TTEEEEEEEEE
T ss_pred HhhCeEEEEec
Confidence 99999999753
No 23
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.3e-103 Score=865.25 Aligned_cols=471 Identities=26% Similarity=0.432 Sum_probs=438.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45899999998877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++. +|+..+++.++|++++++++... ..+.. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 107 a~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 182 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMED-RTFPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182 (515)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCE-EECCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccC--CCCceeEEEEecCCceEEECCCCchhhhhhhh
Confidence 9999999999999986 89999999999999998887542 22221 12346789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|+
T Consensus 183 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~ 258 (515)
T 2d4e_A 183 IAPALAFGNTVVLKPAEWSPFTATKLAEILK----EADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVM 258 (515)
T ss_dssp HHHHHHTTCCEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhHHHHcCCeeeecCCCCcHHHHHHHHHHHH----HhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 9999999999999999999999999888765 6899999999999965 78999998 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
++|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 259 ~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 338 (515)
T 2d4e_A 259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPL 338 (515)
T ss_dssp HHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred HHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC----CCCCCCcccCCeeeecCCCCCcccccccccCceeE
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL----SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPI 441 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~----~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 441 (595)
++++++|||++++++++++++|++++++|+++++||..... +....|+|++|||+.+ +++|++++||+||||++|
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v 417 (515)
T 2d4e_A 339 DPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVA 417 (515)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEE
T ss_pred cccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEE
Confidence 99999999999999999999999999999999999974210 0012699999999999 999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcc
Q 007627 442 MKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 521 (595)
Q Consensus 442 ~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~ 521 (595)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+||++|++||++|
T Consensus 418 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~~ 495 (515)
T 2d4e_A 418 IPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVR--HLPTPFGGVKGSGDRREGGTYALDFY 495 (515)
T ss_dssp EEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCC--CTTSCBCCSGGGBCSCBSHHHHHHHH
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999997542 34599999999999999999999999
Q ss_pred ceeeEEEEc
Q 007627 522 CLVKSVVED 530 (595)
Q Consensus 522 t~~k~v~~~ 530 (595)
|+.|+|+.+
T Consensus 496 ~~~K~v~~~ 504 (515)
T 2d4e_A 496 TDLKTIALP 504 (515)
T ss_dssp EEEEEEEEE
T ss_pred CceeEEEEc
Confidence 999999875
No 24
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=5.7e-103 Score=858.24 Aligned_cols=468 Identities=28% Similarity=0.493 Sum_probs=438.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|
T Consensus 10 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 89 (481)
T 3jz4_A 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDL 89 (481)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++. +|+..+++.++|++....+.... ..+.. ..+...+++++|+|||++|+|||||+.+.+++
T Consensus 90 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 90 ARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGD-TIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEE-EECCS--STTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc-ccccc--CCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 9999999999999984 69999999999999887664321 11111 12456789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++.++.+++. ++|+|+|+||+|+|++ +.+++|++ ++|+|+||||+.+|+.|+
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~----~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~ 241 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAI----RAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHH----HhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999998887755 5799999999999965 78999998 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.|+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 242 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 321 (481)
T 3jz4_A 242 EQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGL 321 (481)
T ss_dssp HHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTT
T ss_pred HHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++|||+++.++++++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 322 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 397 (481)
T 3jz4_A 322 DNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFK 397 (481)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEEC
T ss_pred cCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceEEEEEEC
Confidence 999999999999999999999999999999999999842 2468999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++||++||+.|
T Consensus 398 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k 475 (481)
T 3jz4_A 398 DEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLEIK 475 (481)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC--CSSSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCC--CCCCCcCCcccCcCCCCchHHHHHHhhcee
Confidence 999999999999999999999999999999999999999999997553 345999999999999999999999999999
Q ss_pred EEEEc
Q 007627 526 SVVED 530 (595)
Q Consensus 526 ~v~~~ 530 (595)
+|+..
T Consensus 476 ~v~~~ 480 (481)
T 3jz4_A 476 YMCIG 480 (481)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99753
No 25
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=2.9e-103 Score=868.50 Aligned_cols=468 Identities=22% Similarity=0.383 Sum_probs=438.4
Q ss_pred cccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+. ++.+++++||+| |+++++++.++.+|+++++++|++||+.|++++..+|.++|++++++|++|+++
T Consensus 38 ~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (538)
T 3qan_A 38 YPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHE 115 (538)
T ss_dssp ECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999987 678999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. +|+..+++.++|+++++.+++.++..+.. .+...++.++|+|||++|+|||||+.++++
T Consensus 116 la~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 116 FSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSR---PGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCC---TTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeeccc---CCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 99999999999999985 59999999999999986666655544322 245788999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i 267 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLE----DAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRL 267 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH----HTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHH----HhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999998887755 6899999999999965 78999998 89999999999999999
Q ss_pred HHHhhcC------CCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh
Q 007627 285 MRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (595)
Q Consensus 285 ~~~aa~~------l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~ 358 (595)
++.|+++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 268 ~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 347 (538)
T 3qan_A 268 YERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKN 347 (538)
T ss_dssp HHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTT
T ss_pred HHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHh
Confidence 9999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCc
Q 007627 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (595)
Q Consensus 359 l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPV 438 (595)
+++|+|.++++++|||+++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||
T Consensus 348 ~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 422 (538)
T 3qan_A 348 LTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGD----SSTGFFIQPTIIADLDPEAVIMQEEIFGPV 422 (538)
T ss_dssp CCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSE
T ss_pred ccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcC----CCCCceeCCeeeecCCCCChhhCCCcCCcE
Confidence 999999999999999999999999999999999999 999999842 127999999999999999999999999999
Q ss_pred eeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHH
Q 007627 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEG 517 (595)
Q Consensus 439 l~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~g 517 (595)
++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.......+.+||||+|.||+| +++|++|
T Consensus 423 l~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~g 502 (538)
T 3qan_A 423 VAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDY 502 (538)
T ss_dssp EEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTT
T ss_pred EEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHH
Confidence 999999999999999999999999999999999999999999999999996444433456999999999999 9999999
Q ss_pred HhccceeeEEEEcc
Q 007627 518 LRACCLVKSVVEDR 531 (595)
Q Consensus 518 l~~~t~~k~v~~~~ 531 (595)
|++||+.|+|+.+.
T Consensus 503 l~~ft~~k~v~~~~ 516 (538)
T 3qan_A 503 LALHMQAKTVSEMY 516 (538)
T ss_dssp GGGGEEEEEEEEEC
T ss_pred HHHhhCeEEEEEec
Confidence 99999999998764
No 26
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.1e-102 Score=858.32 Aligned_cols=474 Identities=29% Similarity=0.457 Sum_probs=442.5
Q ss_pred CcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
..++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||..|++++.++|.++|+++++.|++|+++
T Consensus 6 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 85 (490)
T 2ve5_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++...|+..+++.++|++++++++. .+..+. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 86 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 161 (490)
T 2ve5_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIE-GEQIPL---RETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCC-EEEEEE---ETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhc-CccccC---CCCceeeEeeccccEEEEECCCcchHHHHHH
Confidence 999999999999999965699999999999999887753 222221 1345678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|. .+.+++|++ ++|+|+||||+.+|+.|
T Consensus 162 ~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i 237 (490)
T 2ve5_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYT----EAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKV 237 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHH
Confidence 99999999999999999999999999888765 579999999999995 488999998 79999999999999999
Q ss_pred HHHh-hcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 285 MRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 285 ~~~a-a~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
++.+ ++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 238 ~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 317 (490)
T 2ve5_A 238 MASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEe
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMK 443 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~ 443 (595)
|.++++++|||++..++++++++|++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++
T Consensus 318 p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~ 397 (490)
T 2ve5_A 318 PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397 (490)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEE
Confidence 99999999999999999999999999999999999999853221124689999999999999999999999999999999
Q ss_pred eCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccce
Q 007627 444 FNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 523 (595)
Q Consensus 444 ~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~ 523 (595)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|.+|+++||+
T Consensus 398 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~pfGG~k~SG~G~~~G~~~~~~f~~ 475 (490)
T 2ve5_A 398 YDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTR 475 (490)
T ss_dssp ESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--CTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCCCCCCCCCcchHHHHHHhhe
Confidence 99999999999999999999999999999999999999999999997554 3469999999999999999999999999
Q ss_pred eeEEEEcc
Q 007627 524 VKSVVEDR 531 (595)
Q Consensus 524 ~k~v~~~~ 531 (595)
.|+|+.+.
T Consensus 476 ~k~v~~~~ 483 (490)
T 2ve5_A 476 IKSVQVEL 483 (490)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEcc
Confidence 99998754
No 27
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-102 Score=860.67 Aligned_cols=482 Identities=27% Similarity=0.370 Sum_probs=426.3
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
+..++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++|++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 90 (508)
T 3r64_A 11 DATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHRE 90 (508)
T ss_dssp CTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHH
Confidence 34679999999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++. .|+..+++.++++++++++... ..+.. ...+...++.++|+|||++|+|||||+.+++
T Consensus 91 ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~--~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 166 (508)
T 3r64_A 91 EIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG--RISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSI 166 (508)
T ss_dssp HHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE--EEECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC--ccccc-CCCCceeEEEEecceEEEEECCCcchHHHHH
Confidence 999999999999999985 5999999999999988776433 22211 0124568899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHH-HHHHHHHHHHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~-~~l~~~~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
+++++||++||+||+|||+.+|+++ .++.+++ .++|+|+|++|+|+|+ .+.+++|++ ++|+|+||||+.+|+
T Consensus 167 ~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll----~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~ 242 (508)
T 3r64_A 167 RSVAPALAVGNAVVIKPASDTPVTGGVIPARIF----EEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGR 242 (508)
T ss_dssp HHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHH----HTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHH
T ss_pred HHHHHHHhcCCEEEEECCCCChHHHHHHHHHHH----HHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHH
Confidence 9999999999999999999999999 8777764 5799999999999997 478999998 899999999999999
Q ss_pred HHHHHhhc--CCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhcc
Q 007627 283 MIMRNASK--TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (595)
Q Consensus 283 ~v~~~aa~--~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (595)
.|++.|++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 243 ~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (508)
T 3r64_A 243 RVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIP 322 (508)
T ss_dssp HHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence 99999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCcee
Q 007627 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 361 ~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
+|+|.++++++|||+++.++++++++|++|+++|+++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 323 ~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 395 (508)
T 3r64_A 323 TGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLIS 395 (508)
T ss_dssp BSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred CCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceEE
Confidence 9999999999999999999999999999999999999999972 689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhc
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~ 520 (595)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ ..+.+||||+|.||+|++||++||++
T Consensus 396 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ 474 (508)
T 3r64_A 396 VLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEE 474 (508)
T ss_dssp EEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC---------------------CCCHHHHHHH
T ss_pred EEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999998655 34569999999999999999999999
Q ss_pred cceeeEEEEccccccccccCCCCCCCCC
Q 007627 521 CCLVKSVVEDRWWPYIKTKIPKPIQYPV 548 (595)
Q Consensus 521 ~t~~k~v~~~~~~~~~~t~~~~~~~~p~ 548 (595)
||+.|+|+.+... ..-+++.||+.
T Consensus 475 ft~~k~v~~~~~~----~~~~~~~~~~~ 498 (508)
T 3r64_A 475 FTTDRWIGIKRSA----ENLYFQSHHHH 498 (508)
T ss_dssp TEEEEEEEEECCS----TTCCCC-----
T ss_pred hhceEEEEEeccc----chhcchhhccC
Confidence 9999999886532 12233466664
No 28
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.1e-102 Score=854.38 Aligned_cols=452 Identities=26% Similarity=0.433 Sum_probs=427.9
Q ss_pred eEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhh
Q 007627 65 KVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDAS 144 (595)
Q Consensus 65 ~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~ 144 (595)
+++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|+||+..++.
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred hhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecC
Q 007627 145 LGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVS 224 (595)
Q Consensus 145 ~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps 224 (595)
+|+..+++.++|++++++++..+..... .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||
T Consensus 85 -~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 159 (484)
T 3ros_A 85 -EEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHA 159 (484)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 7999999999999999999887654322 24578899999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChh-HHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCC
Q 007627 225 ENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 301 (595)
Q Consensus 225 ~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~-~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGG 301 (595)
+.+|+++.++.+++. ++|+|+|++|+|+|+++ .++ |++ +||+|+||||+.+|+.|++.|++++||+++||||
T Consensus 160 ~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGG 234 (484)
T 3ros_A 160 HNVPGSAALTAKIIK----RAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGG 234 (484)
T ss_dssp TTCHHHHHHHHHHHH----HHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCChHHHHHHHHHHH----HhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCC
Confidence 999999998888765 57999999999999874 566 887 8999999999999999999999999999999999
Q ss_pred cceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHH
Q 007627 302 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSE 381 (595)
Q Consensus 302 k~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~ 381 (595)
|||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++++++
T Consensus 235 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~ 314 (484)
T 3ros_A 235 NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKE 314 (484)
T ss_dssp CCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHH
T ss_pred CCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCc
Q 007627 382 KLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 461 (595)
Q Consensus 382 ~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL 461 (595)
+++++|++++++|+++++||... +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 315 rv~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL 390 (484)
T 3ros_A 315 KLEAQVKEAIDAGAKVFYQYPEI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGL 390 (484)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCC----CCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCS
T ss_pred HHHHHHHHHHHcCCeEEecCCcC----CCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCc
Confidence 99999999999999999999842 25799999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccc
Q 007627 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 532 (595)
Q Consensus 462 ~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~ 532 (595)
++||||+|.++++++++++++|+|+||+.... .+.+||||+|+||+|+++|++||++||+.|+|+.+..
T Consensus 391 ~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 391 GSSVIGSDIDRAKKVSAQIETGMTVINGRWIT--SGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp CEEEECSCHHHHHHHHHHSCSSCCEETSCCCC--CTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred EEEEECCCHHHHHHHHHhCccceEEECCCCCC--CCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 99999999999999999999999999996443 3469999999999999999999999999999988653
No 29
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=2.1e-102 Score=856.18 Aligned_cols=465 Identities=24% Similarity=0.362 Sum_probs=434.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQK-VWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~-~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|++++++|++|+++
T Consensus 19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 96 (501)
T 1uxt_A 19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 96 (501)
T ss_dssp ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4689999999764 7899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccc--cccceEEEecceEEEEEcCcchhhHhh
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMI--HKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
|++++++|+||+..++. +|+..+++.++|++++++++.. +..+...... +...++.++|+|||++|+|||||+.++
T Consensus 97 la~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 174 (501)
T 1uxt_A 97 FAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGG-DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDA 174 (501)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCC-EEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHH
Confidence 99999999999999986 7999999999999999888643 2222211011 235789999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+++.+++|++ ++|+|+||||+.+|+.
T Consensus 175 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~ 250 (501)
T 1uxt_A 175 VNKITYSFIYGNAVVVKPSISDPLPAAMAVKALL----DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGER 250 (501)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHH
Confidence 9999999999999999999999999999888765 589999999999997778899998 8999999999999999
Q ss_pred HHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCC
Q 007627 284 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 284 v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~ 363 (595)
|++.|+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 251 i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 328 (501)
T 1uxt_A 251 VVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGD 328 (501)
T ss_dssp HHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCC
Confidence 999988 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCC-cccCCeeeecCC---CCCcccccccccCce
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPPTVIVNVN---HTMKLMQEEAFGPIM 439 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g-~~~~PTvl~~v~---~~~~i~~eE~FGPVl 439 (595)
|.++++++|||++++++++++++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||+
T Consensus 329 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl 401 (501)
T 1uxt_A 329 PRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVA 401 (501)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEE
T ss_pred ccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCceE
Confidence 9999999999999999999999999999999999999972 57 999999999999 999999999999999
Q ss_pred eEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 440 ~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
+|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++. +...+.+||||+|+||+|+++|++||+
T Consensus 402 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~ 480 (501)
T 1uxt_A 402 LAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVE 480 (501)
T ss_dssp EEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHH
T ss_pred EEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHH
Confidence 9999999999999999999999999999999999999999999999999873 223456999999999999999999999
Q ss_pred ccceeeEEEEcc
Q 007627 520 ACCLVKSVVEDR 531 (595)
Q Consensus 520 ~~t~~k~v~~~~ 531 (595)
+||+.|+|+.+.
T Consensus 481 ~f~~~k~v~~~~ 492 (501)
T 1uxt_A 481 AVTAYKTIVFNY 492 (501)
T ss_dssp HHEEEEEEEEEC
T ss_pred HhCceeEEEEec
Confidence 999999998753
No 30
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.9e-102 Score=854.28 Aligned_cols=465 Identities=29% Similarity=0.475 Sum_probs=435.2
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++|+++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999764 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..|+. .|+..+++.++|+++++++.. .+..+.. ..+...++.++|+|||++|+|||||+.+++++
T Consensus 91 a~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~-g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (487)
T 2w8n_A 91 ARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY-GDIIHTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRK 166 (487)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCC-CEEECCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc-CcccccC--CCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 9999999999999985 699999999999999887743 2222221 12456789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeee---CCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT---GFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~---g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
+++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+ |.+ +.+++|++ ++|+|+||||+.+|+
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~ 242 (487)
T 2w8n_A 167 VGAALAAGCTVVVKPAEDTPFSALALAELAS----QAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK 242 (487)
T ss_dssp HHHHHHHTCEEEEECCTTCCHHHHHHHHHHH----HHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 9999999999999999999999998888765 6899999999999 854 67899998 799999999999999
Q ss_pred HHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh-ccC
Q 007627 283 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS-VSA 361 (595)
Q Consensus 283 ~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~-l~~ 361 (595)
.|++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++
T Consensus 243 ~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~ 322 (487)
T 2w8n_A 243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRV 322 (487)
T ss_dssp HHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCc-ccCCeeeecCCCCCcccccccccCcee
Q 007627 362 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ-YFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 362 G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~-~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
|+|.++++++|||+++.++++++++|++++++|+++++||.. ...|+ |++|||+.+++++|++++||+||||++
T Consensus 323 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~-----~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 397 (487)
T 2w8n_A 323 GNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR-----HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAP 397 (487)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSB-----CTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEE
T ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-----CCCCCceECCEEEecCCCcchhhhcccccceEE
Confidence 999999999999999999999999999999999999999973 23688 999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhc
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 520 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~ 520 (595)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+. ..+||||+|.||+|+++|++||++
T Consensus 398 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~--~~~PfGG~~~SG~G~~~G~~~l~~ 475 (487)
T 2w8n_A 398 VIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISS--VECPFGGVKQSGLGREGSKYGIDE 475 (487)
T ss_dssp EEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCC--TTSCBCCSGGGEESCBSTTTGGGG
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCC--CCCCCCCCCCCCcCCCchHHHHHH
Confidence 999999999999999999999999999999999999999999999999976653 349999999999999999999999
Q ss_pred cceeeEEEEc
Q 007627 521 CCLVKSVVED 530 (595)
Q Consensus 521 ~t~~k~v~~~ 530 (595)
||+.|+|+.+
T Consensus 476 f~~~k~v~~~ 485 (487)
T 2w8n_A 476 YLELKYVCYG 485 (487)
T ss_dssp GEEEEEEEEC
T ss_pred hcCccEEEEe
Confidence 9999999764
No 31
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=2.5e-102 Score=851.74 Aligned_cols=469 Identities=28% Similarity=0.406 Sum_probs=436.7
Q ss_pred CCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh
Q 007627 61 QSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM 140 (595)
Q Consensus 61 ~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~ 140 (595)
...++|+++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+.
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS 82 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred hhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEE
Q 007627 141 VDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIV 220 (595)
Q Consensus 141 ~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VV 220 (595)
.+ ..|+...++.+++++..+.+++++....... .+...+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 83 ~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 83 IT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSI--PFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSS--TTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred HH--HHHHHHHHHHHHHHHhhhhhcccccccCCCC--CCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 44 3699999999999999888887665443321 2345677899999999999999999999999999999999999
Q ss_pred EecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHhCCCEEEEeCChhHHHHHHHHhhcCCCcEeecCC
Q 007627 221 IKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG 300 (595)
Q Consensus 221 lKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElG 300 (595)
+||||.+|+++..+.+++ .++|+|+|++++++|+.+.+..|+..+|+|+||||+.+|+.|++.+++++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~----~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMAL----NTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHH----TTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred ecccccCchHHHHHHhhh----hhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCC
Confidence 999999999998877664 4789999999999998899999998999999999999999999999999999999999
Q ss_pred CcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHH
Q 007627 301 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHS 380 (595)
Q Consensus 301 Gk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~ 380 (595)
||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCC
Q 007627 381 EKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYG 460 (595)
Q Consensus 381 ~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~g 460 (595)
+++++++++++++|+++++||... ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~---~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~G 391 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVE---ELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYG 391 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCE---EETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHhhCceeccCCccc---ccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCC
Confidence 999999999999999999999842 23468999999999999999999999999999999999999999999999999
Q ss_pred ceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccceeeEEEEcccccccccc
Q 007627 461 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPYIKTK 539 (595)
Q Consensus 461 L~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~~k~v~~~~~~~~~~t~ 539 (595)
|++||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+| +++|.+|+++|++.|+|+.+.- .
T Consensus 392 L~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~------~ 465 (474)
T 4h7n_A 392 LSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTN------S 465 (474)
T ss_dssp SEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECS------S
T ss_pred CeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCC------C
Confidence 99999999999999999999999999999877766667999999999998 8999999999999999988763 3
Q ss_pred CCCCCCC
Q 007627 540 IPKPIQY 546 (595)
Q Consensus 540 ~~~~~~~ 546 (595)
.+.|+||
T Consensus 466 ~~~p~w~ 472 (474)
T 4h7n_A 466 TSDPWWF 472 (474)
T ss_dssp SCCTTSC
T ss_pred CCCCCCc
Confidence 4567777
No 32
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=5.3e-102 Score=851.94 Aligned_cols=468 Identities=27% Similarity=0.412 Sum_probs=416.6
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++|+++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (485)
T 4dng_A 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDI 86 (485)
T ss_dssp CSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999998888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++. .|+..+++.++++++.+++. ..+..+.. ...+...+++++|+|||++|+|||||+.+.+++
T Consensus 87 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~-~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (485)
T 4dng_A 87 IMMIARETGGTIIKST-IELEQTIAILDEAMTYTGEL-GGVKEVPS-DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRS 163 (485)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGC-SCEECCCC-SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHh-CCeecccc-CCCCceEEEEEecceEEEEECCCccHHHHHHHH
Confidence 9999999999999996 49999999999999988753 33322211 112456789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHH-HHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~-~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
+++||++||+||+|||+.+|+++ .++.+++ .++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|
T Consensus 164 ~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 164 IAPAIALGNSVVHKPDIQTAISGGTIIAKAF----EHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHTHHHHHHH----HHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHH----HHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 99999999999999999999999 8777665 56899999999999987 58899998 89999999999999999
Q ss_pred HHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCC
Q 007627 285 MRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 364 (595)
Q Consensus 285 ~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~ 364 (595)
++.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 240 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 240 GEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 365 ~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
.++++++||+++..+++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~ 392 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKA 392 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEE
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceEEEEEe
Confidence 999999999999999999999999999999999999972 6899999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+ ..+.+||||+|.||+|++||++|+++||+.
T Consensus 393 ~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~ 471 (485)
T 4dng_A 393 GSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVT 471 (485)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC-----------------------CHHHHHHHEEE
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhce
Confidence 9999999999999999999999999999999999999999999998655 345699999999999999999999999999
Q ss_pred eEEEEcc
Q 007627 525 KSVVEDR 531 (595)
Q Consensus 525 k~v~~~~ 531 (595)
|+|+.+.
T Consensus 472 k~v~~~~ 478 (485)
T 4dng_A 472 KWISIQK 478 (485)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998754
No 33
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=6.3e-102 Score=849.83 Aligned_cols=464 Identities=27% Similarity=0.442 Sum_probs=416.1
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++|+++|
T Consensus 8 ~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 87 (478)
T 3ty7_A 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDI 87 (478)
T ss_dssp CEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 57899999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++...|+..+++.++++++.++++.... .....++.++|+|||++|+|||||+.+.+++
T Consensus 88 a~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 88 VQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHH
Confidence 99999999999999967899999999999999988865432 1245789999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIM 285 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~ 285 (595)
+++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+|+.|+
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~ 235 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFD----KVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIM 235 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHH----HHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHH----HhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 9999999999999999999999998888765 5799999999999965 78999987 899999999999999999
Q ss_pred HHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 286 RNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 286 ~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
+.|+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 236 ~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~ 315 (478)
T 3ty7_A 236 EKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPR 315 (478)
T ss_dssp CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred HHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++|||++++++++++++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 316 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~ 394 (478)
T 3ty7_A 316 EDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYN 394 (478)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecC
Confidence 9999999999999999999999999999999999995211 112479999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceee
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 525 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k 525 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||+ .. ....+||||+|+||+|+++|++||++||+.|
T Consensus 395 ~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k 471 (478)
T 3ty7_A 395 DLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AG--RKPDLPFGGYKQSGLGREWGDYGIEEFLEVK 471 (478)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC------------------------CCGGGEEEE
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CC--CCCCCCcCCcCcCcCCccchHHHHHHhcCeE
Confidence 99999999999999999999999999999999999999999999 22 2345899999999999999999999999999
Q ss_pred EEE
Q 007627 526 SVV 528 (595)
Q Consensus 526 ~v~ 528 (595)
+|+
T Consensus 472 ~v~ 474 (478)
T 3ty7_A 472 SIA 474 (478)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 34
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=3.4e-101 Score=849.96 Aligned_cols=467 Identities=24% Similarity=0.373 Sum_probs=434.4
Q ss_pred cccccCCcccCCCCCCeEEeecCC-CCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPA-TMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~-tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457999999864 5789999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHH
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFN 207 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~ 207 (595)
|++++++|+||+..++. +|+..+++.++|++++++++..+...... ..+...++.++|+|||++|+|||||+.++++
T Consensus 116 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 116 LEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVP--YPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCC--CTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccC--CCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 99999999999999985 79999999999999999888764321111 1234678999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHH
Q 007627 208 PMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMI 284 (595)
Q Consensus 208 ~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v 284 (595)
++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+|.+ +.+++|++ ++|+|+||||+.+|+.|
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i 268 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFH----EAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI 268 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH----HHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHH----HhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHH
Confidence 99999999999999999999999998888765 5899999999999954 78999998 79999999999999999
Q ss_pred HHHhh------cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHh
Q 007627 285 MRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKS 358 (595)
Q Consensus 285 ~~~aa------~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~ 358 (595)
++.|+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 269 ~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~ 348 (516)
T 1uzb_A 269 YEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAER 348 (516)
T ss_dssp HHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred HHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHh
Confidence 99998 889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCc
Q 007627 359 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPI 438 (595)
Q Consensus 359 l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPV 438 (595)
+++|+| ++++++|||+++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||
T Consensus 349 ~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPV 422 (516)
T 1uzb_A 349 LSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPV 422 (516)
T ss_dssp CCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSE
T ss_pred ccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCce
Confidence 999999 99999999999999999999999999999 899999731 236899999999999999999999999999
Q ss_pred eeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCC-CCcHHH
Q 007627 439 MPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVEG 517 (595)
Q Consensus 439 l~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~G~~g 517 (595)
++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+|+ ++|.++
T Consensus 423 l~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~ 502 (516)
T 1uzb_A 423 LSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDY 502 (516)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHH
T ss_pred EEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHH
Confidence 9999999999999999999999999999999999999999999999999997655445569999999999995 689999
Q ss_pred HhccceeeEEEEc
Q 007627 518 LRACCLVKSVVED 530 (595)
Q Consensus 518 l~~~t~~k~v~~~ 530 (595)
+++||+.|+|+.+
T Consensus 503 l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 503 LRLFLEMKAVAER 515 (516)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHHcCCeeEEEec
Confidence 9999999999763
No 35
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-101 Score=847.05 Aligned_cols=469 Identities=22% Similarity=0.337 Sum_probs=434.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998777789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNP 208 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~ 208 (595)
++++++|+||+..++. +|+..+++.++|++...+. +..+..+.. ..+...++.++|+|||++|+|||||+.+++++
T Consensus 86 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~-~~g~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 86 AHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSL-MMGDSLASI--ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHH-HCEEEEEEE--ETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHH-hcCcccccC--CCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999984 7999999999998754443 333322110 12345688999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHH
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMR 286 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~ 286 (595)
+++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~ 237 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFE----KAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYK 237 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHH----HTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 9999999999999999999999999888765 689999999999997788999998 7999999999999999999
Q ss_pred HhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCce-EEEccchHHHHHHHHHHHHHhccCCCCC
Q 007627 287 NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER-FYVHRDIYALFVSQVAKIVKSVSAGPPL 365 (595)
Q Consensus 287 ~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~r-v~V~~~v~d~f~~~L~~~~~~l~~G~~~ 365 (595)
.|++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|+|.
T Consensus 238 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~ 316 (486)
T 1t90_A 238 KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGL 316 (486)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTT
T ss_pred HHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCC
Confidence 999999999999999999999999999999999999999999999999999 999999 999999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeC
Q 007627 366 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFN 445 (595)
Q Consensus 366 ~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 445 (595)
++++++||||++.+++++++++++++++|+++++||... ....|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 317 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~---~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~ 393 (486)
T 1t90_A 317 DDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN---VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVK 393 (486)
T ss_dssp STTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSS---CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred ccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC---CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeC
Confidence 999999999999999999999999999999999999742 12368999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC--CCCcHHHHhccce
Q 007627 446 TDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RFAGVEGLRACCL 523 (595)
Q Consensus 446 ~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~~G~~gl~~~t~ 523 (595)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ...+.+||||+|.||+| |++|++|+++||+
T Consensus 394 ~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~ 472 (486)
T 1t90_A 394 NLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVP-APMAFFPFSGWKSSFFGTLHANGKDSVDFYTR 472 (486)
T ss_dssp SHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCCTTSCCCCEETTEESSSCSSHHHHHHHTEE
T ss_pred CHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCCcCCCCcCCCCCCccchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998533 22346999999999999 8999999999999
Q ss_pred eeEEEEc
Q 007627 524 VKSVVED 530 (595)
Q Consensus 524 ~k~v~~~ 530 (595)
.|+|+.+
T Consensus 473 ~k~v~~~ 479 (486)
T 1t90_A 473 KKVVTAR 479 (486)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999764
No 36
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.5e-101 Score=843.97 Aligned_cols=460 Identities=32% Similarity=0.478 Sum_probs=430.8
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELI 128 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l 128 (595)
.++||+|+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 82 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 82 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35799999997654 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCccccc----ccc-eEEEecceEEEEEcCcchhhH
Q 007627 129 CEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIH----KKA-KVEFHPLGVVGAIVSWNYPFH 203 (595)
Q Consensus 129 ~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~v~~~PlGVV~~I~p~N~P~~ 203 (595)
++++++|+||+..|+ ..|+..+++.++|++++++++.... .+.. ..+ ... ++.++|+|||++|+|||||+.
T Consensus 83 a~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 83 GAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEV-LEGG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEE-EEGG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCc-ccCC--CCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 999999999999998 5799999999999999988776432 1211 112 345 899999999999999999999
Q ss_pred hhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhH
Q 007627 204 NIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGV 280 (595)
Q Consensus 204 ~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~ 280 (595)
++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++ +.+++|++ ++|+|+||||+.+
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~ 234 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFA----EAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGI 234 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHH----HHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHH----HhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHH
Confidence 999999999999999999999999999999888765 5899999999999975 67899998 7999999999999
Q ss_pred HHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhcc
Q 007627 281 GRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 360 (595)
Q Consensus 281 g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~ 360 (595)
|+.|++.|+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 235 g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 312 (475)
T 1euh_A 235 GERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT 312 (475)
T ss_dssp HHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhcc
Confidence 999999988 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCcee
Q 007627 361 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMP 440 (595)
Q Consensus 361 ~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~ 440 (595)
+|+|.+ ++++|||+++++++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 313 ~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~ 384 (475)
T 1euh_A 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLP 384 (475)
T ss_dssp BSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred CCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEE
Confidence 999998 999999999999999999999999999999999972 589999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecC-CCcccccCCCCCCCcCCCCCCCCCcHHHHh
Q 007627 441 IMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLR 519 (595)
Q Consensus 441 v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~-~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~ 519 (595)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+ +..+ .+.+||||+|.||+|+++|++||+
T Consensus 385 v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~ 462 (475)
T 1euh_A 385 IIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIE 462 (475)
T ss_dssp EEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHH
T ss_pred EEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHH
Confidence 9999999999999999999999999999999999999999999999999 5443 346999999999999999999999
Q ss_pred ccceeeEEEEc
Q 007627 520 ACCLVKSVVED 530 (595)
Q Consensus 520 ~~t~~k~v~~~ 530 (595)
+||+.|+|+.+
T Consensus 463 ~~~~~k~v~~~ 473 (475)
T 1euh_A 463 AMTTVKSVVFD 473 (475)
T ss_dssp HTEEEEEEEEE
T ss_pred HhCCeeEEEEe
Confidence 99999999764
No 37
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=2.7e-100 Score=834.03 Aligned_cols=455 Identities=29% Similarity=0.509 Sum_probs=429.5
Q ss_pred CCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChh
Q 007627 62 SETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMV 141 (595)
Q Consensus 62 ~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ 141 (595)
+...++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++|+++|++++++|+||+..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEE
Q 007627 142 DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVI 221 (595)
Q Consensus 142 ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVl 221 (595)
++. .|+..+++.++|+++.++++..+... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 85 ~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vvl 159 (462)
T 3etf_A 85 QAR-AEVTKSAALCDWYAEHGPAMLNPEPT----LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLL 159 (462)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTSCEEC----SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHH-HHHHHHHHHHHHHHHhHHHhcCCccc----CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 985 69999999999999998887665421 1234568899999999999999999999999999999999999999
Q ss_pred ecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecC
Q 007627 222 KVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL 299 (595)
Q Consensus 222 Kps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lEl 299 (595)
|||+.+|+++.++.+++ .++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|++.|+++++|+++||
T Consensus 160 Kps~~tp~~~~~l~~~l----~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lEl 235 (462)
T 3etf_A 160 KHAPNVTGCAQMIARIL----AEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLEL 235 (462)
T ss_dssp ECCTTCHHHHHHHHHHH----HHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ECCCCCcHHHHHHHHHH----HHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEc
Confidence 99999999998887765 4689999999999998888899997 89999999999999999999999999999999
Q ss_pred CCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHH
Q 007627 300 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEH 379 (595)
Q Consensus 300 GGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~ 379 (595)
|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||++..+
T Consensus 236 GGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~ 315 (462)
T 3etf_A 236 GGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDL 315 (462)
T ss_dssp CCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHH
T ss_pred CCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCC
Q 007627 380 SEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 459 (595)
Q Consensus 380 ~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~ 459 (595)
++++++++++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 316 ~~~v~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~ 391 (462)
T 3etf_A 316 RDELHQQVQASVAEGARLLLGGEKI----AGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEF 391 (462)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCccc----CCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCC
Confidence 9999999999999999999999742 247999999999999999999999999999999999999999999999999
Q ss_pred CceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEcc
Q 007627 460 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 460 gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
||++||||+|.++++++++++++|+|+||++... ...+||||+|+||+|+++|++||++||+.|+|+.+|
T Consensus 392 gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 392 GLSATIFTADDTLAAEMAARLECGGVFINGYSAS--DARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp CSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--CCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 9999999999999999999999999999997643 345999999999999999999999999999998876
No 38
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=7.7e-100 Score=829.36 Aligned_cols=449 Identities=28% Similarity=0.436 Sum_probs=412.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhc
Q 007627 83 LSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEG 162 (595)
Q Consensus 83 ~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~ 162 (595)
.+.+|+++++++|++||+.|++++.++|.++|++++++|++|+++|++++++|+||+..|+...|+..+++.+++++++.
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999997789999999999999998
Q ss_pred hhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHH
Q 007627 163 EKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAAL 242 (595)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l 242 (595)
++|..+..........+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~-- 172 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ-- 172 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH--
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH--
Confidence 888766543332222345688999999999999999999999999999999999999999999999999999988765
Q ss_pred HhcCCCCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHH
Q 007627 243 AAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 321 (595)
Q Consensus 243 ~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~ 321 (595)
+ +|+|++|+|+|+.+.+.+|+. ++|+|+||||+.+|+.|+++|++++||+++|||||||+||++|||++.|++.++
T Consensus 173 --a-lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~ 249 (469)
T 3sza_A 173 --Y-LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIA 249 (469)
T ss_dssp --H-SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHH
T ss_pred --h-CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHH
Confidence 4 999999999998877888888 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecC
Q 007627 322 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 401 (595)
Q Consensus 322 ~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG 401 (595)
+++|.|+||.|++++|||||+++||+|+++|+++++++ .|++.++++++|||++++++++++++| +|+++++||
T Consensus 250 ~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG 323 (469)
T 3sza_A 250 WGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGG 323 (469)
T ss_dssp HHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECC
T ss_pred HHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCC
Confidence 99999999999999999999999999999999999998 599988999999999999999999998 699999999
Q ss_pred CCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc
Q 007627 402 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 481 (595)
Q Consensus 402 ~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~ 481 (595)
.. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 324 ~~-----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~ 398 (469)
T 3sza_A 324 TG-----DAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETS 398 (469)
T ss_dssp CE-----ETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCC
T ss_pred cc-----CCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCC
Confidence 84 2478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCcch
Q 007627 482 CGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN 551 (595)
Q Consensus 482 ~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~~~ 551 (595)
+|+|+||+...+...+.+||||+|+||+|+++|.+|+++||+.|+|+.++++. ....+++|||+.+
T Consensus 399 ~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~----~~~~~~~yppy~~ 464 (469)
T 3sza_A 399 SGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMN----DEGLKVRYPPSPA 464 (469)
T ss_dssp CSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSC----CGGGGGGSSSCCC
T ss_pred cceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCccc----ccccccccCCCCc
Confidence 99999999866555567999999999999999999999999999999887531 1124578988644
No 39
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=9.5e-99 Score=834.30 Aligned_cols=481 Identities=20% Similarity=0.267 Sum_probs=438.8
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh-H
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEH-Q 125 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~-~ 125 (595)
...+||+|+|+.+. ..+.++||+| |+++++++.++.+|+++|+++|++||+.|++++.++|.++|++++++|+++ +
T Consensus 63 ~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 140 (563)
T 4e3x_A 63 AIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRR 140 (563)
T ss_dssp ECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTH
T ss_pred cCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccH
Confidence 46799999999864 4678899998 899999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhh
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI 205 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~ 205 (595)
++|++++++|+||+..++...|+..+++.++|+++.++++........+ .....+++++|+|||++|+|||||+...
T Consensus 141 ~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 141 AEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVP---PSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCT---TEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCC---CCcceEEEecCceEEEEECCchHHHHHH
Confidence 9999999999999999996544999999999999999887664322221 1233456677789999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHH
Q 007627 206 FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGR 282 (595)
Q Consensus 206 ~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~ 282 (595)
.+++++|| +||+||+|||+.+|+++.++++++. ++|+|+|+||+|+|++ +.+++|++ +||+|+||||+.+|+
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~----eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~ 292 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILR----EAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFK 292 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHH----HhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 99999999 5999999999999999998887765 6899999999999976 67899997 999999999999999
Q ss_pred HHHHHhhcCCCc------EeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHH
Q 007627 283 MIMRNASKTLTP------VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 356 (595)
Q Consensus 283 ~v~~~aa~~l~p------v~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~ 356 (595)
.|+++|+++++| +++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++
T Consensus 293 ~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~ 372 (563)
T 4e3x_A 293 HLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEH 372 (563)
T ss_dssp HHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHH
Confidence 999999999985 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCC-CCCCCCcccccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCccccccc
Q 007627 357 KSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEA 434 (595)
Q Consensus 357 ~~l~~G~~-~~~~~~~G~li~~~~~~~~~~~i~~a~~-~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~ 434 (595)
+++++|+| .++++++||||++.++++++++|+++++ +|+++++||... ...|+|++|||+.+++++|++++||+
T Consensus 373 ~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEi 448 (563)
T 4e3x_A 373 SRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEEI 448 (563)
T ss_dssp HTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSCC
T ss_pred HhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCCC
Confidence 99999999 9999999999999999999999999996 899999999742 24799999999999999999999999
Q ss_pred ccCceeEEeeCC--HHHHHHHh-hcCCCCceeEEecCcHHHHHHHHHHhc--cCCeeecCCCcccccCCCCCCCcCCCCC
Q 007627 435 FGPIMPIMKFNT--DEEVVKLA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSGF 509 (595)
Q Consensus 435 FGPVl~v~~~~~--~~eAi~~a-N~~~~gL~asVft~d~~~~~~~~~~l~--~G~v~IN~~~~~~~~~~~PfGG~~~SG~ 509 (595)
||||++|++|+| +||||+++ |+++|||++||||+|.+++++++++++ +|+|+||+..+......+||||+|.||+
T Consensus 449 FGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~ 528 (563)
T 4e3x_A 449 FGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGT 528 (563)
T ss_dssp CSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBC
T ss_pred cCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCC
Confidence 999999999987 79999999 799999999999999999999999976 9999999986655445699999999999
Q ss_pred C-CCCcHHHHhccceeeEEEEccccccccccCCCCCCCCCc
Q 007627 510 G-RFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVA 549 (595)
Q Consensus 510 G-~~~G~~gl~~~t~~k~v~~~~~~~~~~t~~~~~~~~p~~ 549 (595)
| +.+|.++|++|++.|+|..+. ..|.++|||+.
T Consensus 529 g~~~~G~~~l~~~~~~k~v~~~~-------~~~~~~~yp~~ 562 (563)
T 4e3x_A 529 NDKPGGPHYILRWTSPQVIKETH-------KPLGDWRYSYM 562 (563)
T ss_dssp CCCTTSTTGGGGGBCCEEEEEEC-------SCCCCSSCTTC
T ss_pred CCccCCHHHHHHhCceEEEEEeC-------cCCCcccCCCC
Confidence 8 899999999999999998753 23567899964
No 40
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=4.3e-99 Score=822.55 Aligned_cols=449 Identities=27% Similarity=0.387 Sum_probs=405.3
Q ss_pred CeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhh
Q 007627 64 TKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDA 143 (595)
Q Consensus 64 ~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea 143 (595)
...+++||.||+++++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||+..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEec
Q 007627 144 SLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKV 223 (595)
Q Consensus 144 ~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKp 223 (595)
..+|+..+++.++++++++++|..++..+......+...++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 76799999999999999999988765444332223457889999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh-CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCc
Q 007627 224 SENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 302 (595)
Q Consensus 224 s~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~-~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk 302 (595)
|+.+|+++.++++++.++ +|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|+++|++++||+++|||||
T Consensus 166 s~~tp~t~~~l~~l~~~a-----lP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk 240 (457)
T 3lns_A 166 SETTPETSAVIEKIIAEA-----FAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGK 240 (457)
T ss_dssp CTTCHHHHHHHHHHHHHH-----CCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCChHHHHHHHHHHHHh-----CCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCC
Confidence 999999999999988753 999999999997788999999 99999999999999999999999999999999999
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHH
Q 007627 303 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEK 382 (595)
Q Consensus 303 ~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~ 382 (595)
||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++|||++++++++
T Consensus 241 ~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~r 315 (457)
T 3lns_A 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQR 315 (457)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHH
T ss_pred CCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987 5554 9999999999999
Q ss_pred HHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhc-CCCCc
Q 007627 383 LQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND-SRYGL 461 (595)
Q Consensus 383 ~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~-~~~gL 461 (595)
++++|+++ ++++++||.. ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||
T Consensus 316 v~~~i~~a---~~~~~~gg~~-----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL 387 (457)
T 3lns_A 316 LVSLLEAT---QGQVLVGSQA-----DVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPL 387 (457)
T ss_dssp HHHHHHHC---CSEEEECCCE-----EGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCS
T ss_pred HHHHHHhc---CCeEEeCCcc-----CCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCe
Confidence 99999986 3599999973 246899999999999999999999999999999999999999999999 99999
Q ss_pred eeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEc
Q 007627 462 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 462 ~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~ 530 (595)
++||||+|.++++++++++++|+|+||+...+...+.+||||+|.||+||++|++||++||+.|+|+..
T Consensus 388 ~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 388 AVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 999999999999999999999999999986554456799999999999999999999999999999753
No 41
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.2e-97 Score=817.38 Aligned_cols=460 Identities=21% Similarity=0.334 Sum_probs=427.6
Q ss_pred ccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 50 FIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 50 ~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
++||+|+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++|+++|+
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999864 4679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHH
Q 007627 130 EISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPM 209 (595)
Q Consensus 130 ~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l 209 (595)
+++++|+||+..++. +|+..+++.++|+++..+++....... ..+...+++++|+|||++|+|||||+.++++++
T Consensus 86 ~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (490)
T 3ju8_A 86 RVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHI 160 (490)
T ss_dssp HHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHH
Confidence 999999999999985 799999999999998887765432211 123456778999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHH
Q 007627 210 LAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN 287 (595)
Q Consensus 210 ~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~ 287 (595)
++||++||+||+|||+.+|+++.++.+++. ++|+|+|++|+|+|+.+.+++|++ ++|+|+||||+.+|+.|+++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 236 (490)
T 3ju8_A 161 VPALLAGNCVVFKPSELTPKVAELTLKAWI----QAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQ 236 (490)
T ss_dssp HHHHHHTCEEEEECCTTCHHHHHHHHHHHH----HTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCCCCcHHHHHHHHHHH----HhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999998887755 689999999999998889999998 79999999999999999999
Q ss_pred hhcCCCcE-eecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccch-HHHHHHHHHHHHHhccCCC-C
Q 007627 288 ASKTLTPV-TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDI-YALFVSQVAKIVKSVSAGP-P 364 (595)
Q Consensus 288 aa~~l~pv-~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v-~d~f~~~L~~~~~~l~~G~-~ 364 (595)
|+++++|+ ++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |
T Consensus 237 aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~ 316 (490)
T 3ju8_A 237 FGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFD 316 (490)
T ss_dssp TTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred hhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCC
Confidence 99999998 8999999999999999999999999999999999999999999999996 9999999999999999999 9
Q ss_pred CCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEee
Q 007627 365 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKF 444 (595)
Q Consensus 365 ~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~ 444 (595)
.++++++|||+++++++++++++++++++|+++++||... +..|+|++|||+. ++++|++++||+||||++|++|
T Consensus 317 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~ 391 (490)
T 3ju8_A 317 EQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQP----IDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRY 391 (490)
T ss_dssp CSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCC----STTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEE
T ss_pred CCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCcc----CCCCCEEccEEEE-eCCCCccccccccccEEEEEEe
Confidence 9999999999999999999999999999999999999743 2579999999999 9999999999999999999999
Q ss_pred CCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCCCCcHHHHhcccee
Q 007627 445 NTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 524 (595)
Q Consensus 445 ~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~ 524 (595)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...+. .+.+||||+|.||++ ++++|++.
T Consensus 392 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~~PfGG~~~SG~~------~~~~~~~~ 464 (490)
T 3ju8_A 392 SDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGA-ASSAPFGGIGASGNH------RPSAYYAA 464 (490)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCC-CTTSEECCCGGGBSS------CCEETTHH
T ss_pred CCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCC-CCCCCcCCccccchh------HHHhhhee
Confidence 99999999999999999999999999999999999999999999976533 345999999999985 58999999
Q ss_pred eEEEEcc
Q 007627 525 KSVVEDR 531 (595)
Q Consensus 525 k~v~~~~ 531 (595)
|+|+...
T Consensus 465 k~v~~~~ 471 (490)
T 3ju8_A 465 DYCAYPV 471 (490)
T ss_dssp HHHEEEE
T ss_pred EEEEEec
Confidence 9987653
No 42
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.9e-96 Score=815.92 Aligned_cols=473 Identities=16% Similarity=0.221 Sum_probs=420.9
Q ss_pred cccccCCcccCCCCCCeEEeecCCCCcEEEEecCCCHHHHHHHHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHhHHH
Q 007627 49 SFIYIPPRGRTPQSETKVQCYEPATMKYLGYFPALSRAEVDERVAQARKA-QKVWAKSSFKQRRQFLRILLKYIIEHQEL 127 (595)
Q Consensus 49 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A-~~~W~~~~~~~R~~~L~~l~~~l~~~~~~ 127 (595)
.++||+|+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+++|.++|.++|++++++|++|+++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46899999997654 479999999999999999988 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcC------cccccCCcccccccceEEEecc-eEEEEEcCcch
Q 007627 128 ICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLK------PEYRSSGRSMIHKKAKVEFHPL-GVVGAIVSWNY 200 (595)
Q Consensus 128 l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~v~~~Pl-GVV~~I~p~N~ 200 (595)
|++++++|+||+..|+. .|+..+++.++|++..+++... ++..+... ......++.++|+ |||++|+||||
T Consensus 86 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~P~~GVv~~I~PwN~ 163 (534)
T 2y53_A 86 YYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSK-DRSFSAQHVLSPTRGVALFINAFNF 163 (534)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECST-TSSEEEEEEEEECSSCEEEECCTTC
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCC-CCcccceEEEecCCCEEEEECCCch
Confidence 99999999999999985 6999999999999987755422 11111100 0011357889997 99999999999
Q ss_pred hhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcC-CCCCcEEeeeCChh-HHHHHHhCCCEEEEeCCh
Q 007627 201 PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGFAE-TGEALVSSVDKIIFVGSP 278 (595)
Q Consensus 201 P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aG-lp~g~v~vv~g~~~-~~~~L~~~vd~I~ftGS~ 278 (595)
|+.++++++++||++||+||+|||+.+|+++..+++++. ++| +|+|+||+|+|+++ .++.| ..+|+|+||||+
T Consensus 164 P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~----~aG~lP~gvv~vv~g~~~~l~~~l-~~vd~V~FTGS~ 238 (534)
T 2y53_A 164 PSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVV----DAGILPPGALSIICGSSAGLLDQI-RSFDVVSFTGSA 238 (534)
T ss_dssp TTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHH----HHTCSCTTSEEECCSCCTTSGGGC-CTTCEEEEESCH
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HhCCCCCCeEEEEeCChHHHHhcc-cccCEEEEECCH
Confidence 999999999999999999999999999999998888765 589 79999999999653 23322 179999999999
Q ss_pred hHHHHHHHHhh--cCCCcEeecCCCcceEEEcCCC-----CHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHH
Q 007627 279 GVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 351 (595)
Q Consensus 279 ~~g~~v~~~aa--~~l~pv~lElGGk~p~IV~~da-----Dl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~ 351 (595)
.+|+.|++.|+ +++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999999875 8999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC--CCCCCCcccCCeeeecCCCC--C
Q 007627 352 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SEGAVDQYFPPTVIVNVNHT--M 427 (595)
Q Consensus 352 L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~--~~~~~g~~~~PTvl~~v~~~--~ 427 (595)
|+++++++++|+|.++++++|||+++.++++++++|+++ .+|+++++||..... +....|+|++|||+.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 689999999974210 01136899999999999987 6
Q ss_pred cccccccccCceeEEeeC---CH-----HHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh--ccCCeeecCCCcc----
Q 007627 428 KLMQEEAFGPIMPIMKFN---TD-----EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI--QCGVAAINDFASN---- 493 (595)
Q Consensus 428 ~i~~eE~FGPVl~v~~~~---~~-----~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l--~~G~v~IN~~~~~---- 493 (595)
++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.++++++++++ ++|+|+||++..+
T Consensus 398 ~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~ 477 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQT 477 (534)
T ss_dssp STTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCC
T ss_pred HHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCccccccc
Confidence 999999999999999999 99 999999999999999999999999999999999 8999999986421
Q ss_pred ---cccCCCCCCCcCCCCCCCC-CcHHHHhccceeeEEEEcc
Q 007627 494 ---YMCQSLPFGGVKDSGFGRF-AGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 494 ---~~~~~~PfGG~~~SG~G~~-~G~~gl~~~t~~k~v~~~~ 531 (595)
...+.+||||+|.||+|++ +|.+|+++|++.|++...+
T Consensus 478 ~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 478 GHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp CSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEH
T ss_pred ccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCH
Confidence 1234699999999999999 6999999999999998754
No 43
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=3.7e-95 Score=846.83 Aligned_cols=469 Identities=22% Similarity=0.360 Sum_probs=437.7
Q ss_pred CcccccCCcccCCCCCCeEEeecCCC-CcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHH
Q 007627 48 NSFIYIPPRGRTPQSETKVQCYEPAT-MKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQE 126 (595)
Q Consensus 48 ~~~~~i~g~~~~~~~~~~~~~~~P~t-g~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~ 126 (595)
...+||+|+|+.+ +.+++++||+| |+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++++++|++|++
T Consensus 531 ~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~ 608 (1026)
T 4f9i_A 531 TYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLF 608 (1026)
T ss_dssp EECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999864 67899999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhH
Q 007627 127 LICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIF 206 (595)
Q Consensus 127 ~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~ 206 (595)
+|++++++|+||+..++. +|+..+++.++|++..++++..+..... ..+..+++.++|+|||++|+|||||+.+.+
T Consensus 609 eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 609 ELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp HHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 999999999999999984 6999999999999999988765443221 134567899999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHH
Q 007627 207 NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRM 283 (595)
Q Consensus 207 ~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~ 283 (595)
+++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+|++ +.+++|++ +||+|+||||+.+|+.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~----eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~ 760 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFR----EAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLR 760 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH----HTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHH----HhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHH
Confidence 999999999999999999999999998888765 6899999999999976 68999998 8999999999999999
Q ss_pred HHHHhh------cCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHH
Q 007627 284 IMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 357 (595)
Q Consensus 284 v~~~aa------~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~ 357 (595)
|++.|+ ++++|+++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 761 I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~ 840 (1026)
T 4f9i_A 761 IIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAK 840 (1026)
T ss_dssp HHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHH
Confidence 999998 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccC
Q 007627 358 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 437 (595)
Q Consensus 358 ~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGP 437 (595)
++++|+|.++++++||+|++.++++++++|++++++| ++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 841 ~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGP 915 (1026)
T 4f9i_A 841 ATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGP 915 (1026)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSS
T ss_pred hcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCc
Confidence 9999999999999999999999999999999999999 999999731 22499999999999999999999999999
Q ss_pred ceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCCC-CCcHH
Q 007627 438 IMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR-FAGVE 516 (595)
Q Consensus 438 Vl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G~-~~G~~ 516 (595)
|++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+..++...+.+||||+|.||+|+ .+|++
T Consensus 916 Vl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~ 995 (1026)
T 4f9i_A 916 VLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPD 995 (1026)
T ss_dssp EEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTT
T ss_pred EEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHH
Confidence 99999999999999999999999999999999999999999999999999998766555669999999999995 68999
Q ss_pred HHhccceeeEEEEcc
Q 007627 517 GLRACCLVKSVVEDR 531 (595)
Q Consensus 517 gl~~~t~~k~v~~~~ 531 (595)
+|++|++.|+|+.+.
T Consensus 996 ~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 996 YLLHFMDPRVVTENT 1010 (1026)
T ss_dssp TGGGGEEEEEEEEEC
T ss_pred HHHHhceEEEEEEec
Confidence 999999999998765
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.9e-94 Score=798.77 Aligned_cols=459 Identities=18% Similarity=0.211 Sum_probs=417.8
Q ss_pred CCcccccCCcccCCCCCCeEEeecCCCCcEEE-EecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhH
Q 007627 47 DNSFIYIPPRGRTPQSETKVQCYEPATMKYLG-YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQ 125 (595)
Q Consensus 47 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~l~-~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~ 125 (595)
...++||+|+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+.|++++..+|.++|++++++|++|+
T Consensus 28 ~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (528)
T 3v4c_A 28 PKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARA 102 (528)
T ss_dssp CCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 3367899999998643 89999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHHHhchh--hcCcccc---cCCcccccccceEEEecceEEEEEcCcch
Q 007627 126 ELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNY 200 (595)
Q Consensus 126 ~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~v~~~PlGVV~~I~p~N~ 200 (595)
++|++++++|+||+..++. +|+..+++.++|+++.+++ ++.+... +......+...++.++|+|||++|+||||
T Consensus 103 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 181 (528)
T 3v4c_A 103 EAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNF 181 (528)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSS
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcc
Confidence 9999999999999999884 7999999999999998877 4432211 11000123456889999999999999999
Q ss_pred hhHhhH--HHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEe
Q 007627 201 PFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFV 275 (595)
Q Consensus 201 P~~~~~--~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ft 275 (595)
|+.+.+ +++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|+||+|+|.+ +.+++|++ +||+|+||
T Consensus 182 P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fT 261 (528)
T 3v4c_A 182 PLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261 (528)
T ss_dssp TTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEE
T ss_pred hHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEE
Confidence 999865 99999999999999999999999999999999999999999999999999965 78999998 89999999
Q ss_pred CChhHHHHHHHHhhcCC--CcEeecCCCcceEEEcCCC---CHHHHHHHHHHHHHHcCCCCCCCCceEEEccc-hHHHHH
Q 007627 276 GSPGVGRMIMRNASKTL--TPVTLELGGKDAFIVCDDV---DVPHVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFV 349 (595)
Q Consensus 276 GS~~~g~~v~~~aa~~l--~pv~lElGGk~p~IV~~da---Dl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~-v~d~f~ 349 (595)
||+.+|+.|++.|++++ ||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +||+|+
T Consensus 262 GS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~ 341 (528)
T 3v4c_A 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFT 341 (528)
T ss_dssp SCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHH
T ss_pred CChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHH
Confidence 99999999999999999 9999999999999999999 88999999999999999999999999999997 999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCC---
Q 007627 350 SQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT--- 426 (595)
Q Consensus 350 ~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~--- 426 (595)
++|++++++++.| +++||+++.++.++++++++ ++|+++++||. ..|+|++|||+.+++++
T Consensus 342 ~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~-------~~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 342 TAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATE-------SSGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCC-------CCTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCC-------cCCceeccEEEEecCccccc
Confidence 9999999998754 57899999888888887764 47999999997 26899999999988887
Q ss_pred CcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecC--cHHHHHHHHHHhc--cCCeeecCCCcc-cccCCCCC
Q 007627 427 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG--SQHRAREIAAQIQ--CGVAAINDFASN-YMCQSLPF 501 (595)
Q Consensus 427 ~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~--d~~~~~~~~~~l~--~G~v~IN~~~~~-~~~~~~Pf 501 (595)
|++++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++ +|+|+||++.+. ...+.+||
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pf 485 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVH 485 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence 899999999999999999999999999999999999999999 8899999999998 999999997553 23456999
Q ss_pred CC-cCCCCCCCCC--cHHHHhccceeeEE
Q 007627 502 GG-VKDSGFGRFA--GVEGLRACCLVKSV 527 (595)
Q Consensus 502 GG-~~~SG~G~~~--G~~gl~~~t~~k~v 527 (595)
|| +|.||+|++| |++|+++|++.|++
T Consensus 486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 486 GGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 99 9999999987 99999999999975
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.3e-92 Score=781.17 Aligned_cols=450 Identities=17% Similarity=0.225 Sum_probs=407.4
Q ss_pred CCCCCeEEeecCCCCcEE-EEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCC
Q 007627 60 PQSETKVQCYEPATMKYL-GYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGK 138 (595)
Q Consensus 60 ~~~~~~~~~~~P~tg~~l-~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk 138 (595)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++++++|+||
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 446778999999999999 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhhHHHhHHHHHHHHHHhchh--hcCcccc---cCCcccccccceEEEecceEEEEEcCcchhhHhh--HHHHHH
Q 007627 139 TMVDASLGEIMTTCEKITWLLSEGEK--WLKPEYR---SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLA 211 (595)
Q Consensus 139 ~~~ea~~~Ei~~~~~~l~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~--~~~l~~ 211 (595)
+..++ .+|+..+++.++|+++++++ ++.+... +..........++.++|+|||++|+|||||+.+. ++++++
T Consensus 83 ~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ 161 (510)
T 1ez0_A 83 PEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 161 (510)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHH
Confidence 99887 57999999999999998876 5543210 1000001113578999999999999999999985 499999
Q ss_pred HHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHHHHHh
Q 007627 212 AVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNA 288 (595)
Q Consensus 212 ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~a 288 (595)
||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|. .+.+++|++ .||+|+||||+.+|+.|++.|
T Consensus 162 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 241 (510)
T 1ez0_A 162 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 241 (510)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999995 478999998 799999999999999999999
Q ss_pred hcCC--CcEeecCCCcceEEEcCCCCHH--HHHHHHHHHHHHcCCCCCCCCceEEEccc-hHHHHHHHHHHHHHhccCCC
Q 007627 289 SKTL--TPVTLELGGKDAFIVCDDVDVP--HVAQIAVRAALQSSGQNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGP 363 (595)
Q Consensus 289 a~~l--~pv~lElGGk~p~IV~~daDl~--~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~-v~d~f~~~L~~~~~~l~~G~ 363 (595)
++++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++++.
T Consensus 242 a~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~-- 319 (510)
T 1ez0_A 242 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP-- 319 (510)
T ss_dssp HHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC--
T ss_pred hccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC--
Confidence 9996 9999999999999999999999 99999999999999999999999999999 999999999999999864
Q ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHH-hcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCC---CcccccccccCce
Q 007627 364 PLAGKYDMGALCLLEHSEKLQNLVNDAL-DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIM 439 (595)
Q Consensus 364 ~~~~~~~~G~li~~~~~~~~~~~i~~a~-~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~---~~i~~eE~FGPVl 439 (595)
||++++.+.+++.++|++++ ++|+++++||. +|+|++|||+.+++++ |++++||+||||+
T Consensus 320 --------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl 383 (510)
T 1ez0_A 320 --------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQS 383 (510)
T ss_dssp --------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEE
T ss_pred --------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeE
Confidence 57888999999999999999 47999999986 2899999999988877 9999999999999
Q ss_pred eEEeeCCHHHHHHHhhcCCCCceeEEecCcH--HHHHHHHHHh--ccCCeeecCCCccc-ccCCCCCCC-cCCCCCCCC-
Q 007627 440 PIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ--HRAREIAAQI--QCGVAAINDFASNY-MCQSLPFGG-VKDSGFGRF- 512 (595)
Q Consensus 440 ~v~~~~~~~eAi~~aN~~~~gL~asVft~d~--~~~~~~~~~l--~~G~v~IN~~~~~~-~~~~~PfGG-~~~SG~G~~- 512 (595)
+|++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+||++.... ..+.+|||| +|+||+|+.
T Consensus 384 ~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~ 463 (510)
T 1ez0_A 384 LIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST 463 (510)
T ss_dssp EEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC
T ss_pred EEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCC
Confidence 9999999999999999999999999999987 7899999999 79999999875432 234589999 799999854
Q ss_pred -CcHHHHhccceeeEEE
Q 007627 513 -AGVEGLRACCLVKSVV 528 (595)
Q Consensus 513 -~G~~gl~~~t~~k~v~ 528 (595)
+|++||++|++.|++.
T Consensus 464 ~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 464 SVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SSSGGGGGGGEEEEEEE
T ss_pred CccHHHHHHhheEEEEc
Confidence 8999999999988764
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.6e-88 Score=789.49 Aligned_cols=435 Identities=22% Similarity=0.355 Sum_probs=404.9
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHHH
Q 007627 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLL 159 (595)
Q Consensus 80 v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~~ 159 (595)
++.++.+|+++++++|++||..|+++|.++|.++|+++++.|++|+++|++++++|+||+..++ .+|+..+++.++|++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999999999999998 579999999999999
Q ss_pred HhchhhcCcc-cccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 007627 160 SEGEKWLKPE-YRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (595)
Q Consensus 160 ~~~~~~~~~~-~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~ 238 (595)
+.++++.... ..+.. .+..+++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++
T Consensus 623 ~~a~~~~g~~~~~~~~---~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell 699 (1001)
T 3haz_A 623 AQGRKLFGSETAMPGP---TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALL 699 (1001)
T ss_dssp HHHHHHHSSCEECCCC---TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHhhcCccccccCC---CCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHH
Confidence 9988765432 12211 2457889999999999999999999999999999999999999999999999999888876
Q ss_pred HHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhc---CCCcEeecCCCcceEEEcCCCCH
Q 007627 239 QAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASK---TLTPVTLELGGKDAFIVCDDVDV 313 (595)
Q Consensus 239 ~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~---~l~pv~lElGGk~p~IV~~daDl 313 (595)
. ++|+|+|+||+|+|+++.+++|++ +||+|+||||+.+|+.|++.+++ +++|+++|||||||+||++|||+
T Consensus 700 ~----eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADl 775 (1001)
T 3haz_A 700 H----EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALP 775 (1001)
T ss_dssp H----HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCH
T ss_pred H----HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCH
Confidence 5 579999999999998755999998 79999999999999999999886 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhc
Q 007627 314 PHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDK 393 (595)
Q Consensus 314 ~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~ 393 (595)
+.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||||++.++++++++|++++++
T Consensus 776 d~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~ 855 (1001)
T 3haz_A 776 EQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTE 855 (1001)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCC--HHHHHHHhhcCCCCceeEEecCcHH
Q 007627 394 GAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQH 471 (595)
Q Consensus 394 Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~--~~eAi~~aN~~~~gL~asVft~d~~ 471 (595)
| ++ +||.. ...|+|++|||+.+ ++|.+++||+||||++|++|++ +||||+++|+++|||++||||+|.+
T Consensus 856 g-~v-~gg~~-----~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~ 926 (1001)
T 3haz_A 856 A-RL-HFAGP-----APEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDD 926 (1001)
T ss_dssp S-EE-EEECC-----CCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHH
T ss_pred C-eE-ecccc-----CCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHH
Confidence 8 88 88873 24699999999975 7899999999999999999986 7999999999999999999999999
Q ss_pred HHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC-CCCcHHHHhccceeeEEEEcc
Q 007627 472 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 472 ~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~gl~~~t~~k~v~~~~ 531 (595)
+++++++++++|+|+||+...+...+.+||||+|.||+| +.+|++||++||+.|+|+.+.
T Consensus 927 ~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 927 SIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred HHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 999999999999999999876655556899999999999 568899999999999998865
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.3e-85 Score=709.74 Aligned_cols=409 Identities=16% Similarity=0.167 Sum_probs=337.9
Q ss_pred EeecCCCCcEEEEecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh-------CCC
Q 007627 67 QCYEPATMKYLGYFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDT-------GKT 139 (595)
Q Consensus 67 ~~~~P~tg~~l~~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~-------Gk~ 139 (595)
-|+||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+ ||+
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999 699
Q ss_pred hh----hhhhhHHHhHHHHHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhc
Q 007627 140 MV----DASLGEIMTTCEKITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFS 215 (595)
Q Consensus 140 ~~----ea~~~Ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaa 215 (595)
.. ++ .+|+..+++.++|++++++++..+. .+......+...++.++|+|||++|+||| |++.+ +++++||++
T Consensus 90 ~~~rl~~a-~~ev~~~~~~~~~~a~~~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaa 165 (463)
T 2h5g_A 90 LLKRLSLS-TSKLNSLAIGLRQIAASSQDSVGRV-LRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIAS 165 (463)
T ss_dssp HHHTTCCC-HHHHHHHHHHHHHHHHHCTTSTTCE-EEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHH
T ss_pred hhhhhhhh-HHHHHHHHHHHHHHHHhhHhhcCcc-cccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHc
Confidence 87 45 4799999999999999988876543 12111012345689999999999999777 77766 899999999
Q ss_pred CCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeeeCChhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCC
Q 007627 216 GNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLT 293 (595)
Q Consensus 216 GN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~ 293 (595)
||+||+|||+.+|+++.++++++.++|.++| |+|+||+|+|+.+.++.|++ +||+|+||||+.+|+.|++.|+ +|
T Consensus 166 GN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~ 242 (463)
T 2h5g_A 166 GNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GI 242 (463)
T ss_dssp TCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CC
Confidence 9999999999999999999999999998889 99999999995578899987 7999999999999999999988 99
Q ss_pred cEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCccc
Q 007627 294 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGA 373 (595)
Q Consensus 294 pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~ 373 (595)
|+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++|| ||
T Consensus 243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p 296 (463)
T 2h5g_A 243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TP 296 (463)
T ss_dssp CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SH
T ss_pred CEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hH
Confidence 9999999999999999999999999999999999 999999999999999998 23
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHH
Q 007627 374 LCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 453 (595)
Q Consensus 374 li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~ 453 (595)
+ + ++++++++++|++++.||.. ...|+|+ +++|++++||+||||++|++|+|+||||++
T Consensus 297 ~-----~---~~~i~~~~~~Ga~v~~G~~~-----~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~ 355 (463)
T 2h5g_A 297 L-----F---DQIIDMLRVEQVKIHAGPKF-----ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDH 355 (463)
T ss_dssp H-----H---HHHHHHHHHTTCEEEECHHH-----HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHH
T ss_pred H-----H---HHHHHHHHhCCCEEEeCCcc-----cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHH
Confidence 2 2 34588888999999855431 1234442 578999999999999999999999999999
Q ss_pred hhcCCCCceeEEecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC--CC--CcHHHHhccceeeEEEE
Q 007627 454 ANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG--RF--AGVEGLRACCLVKSVVE 529 (595)
Q Consensus 454 aN~~~~gL~asVft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G--~~--~G~~gl~~~t~~k~v~~ 529 (595)
+|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+| ++ +|++||++||+.|+|+.
T Consensus 356 aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~ 433 (463)
T 2h5g_A 356 IHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRF--SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLR 433 (463)
T ss_dssp HHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG--CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEE
T ss_pred HHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC--CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEE
Confidence 9999999999999999999999999999999999997654 345999999999999 76 99999999999999987
Q ss_pred cc
Q 007627 530 DR 531 (595)
Q Consensus 530 ~~ 531 (595)
+.
T Consensus 434 ~~ 435 (463)
T 2h5g_A 434 GK 435 (463)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=3.1e-82 Score=691.08 Aligned_cols=421 Identities=18% Similarity=0.201 Sum_probs=375.6
Q ss_pred EecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHHHHH
Q 007627 79 YFPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWL 158 (595)
Q Consensus 79 ~v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l~~~ 158 (595)
+++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+|+++|++++++|+||+..++...++...++.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 44566789999999999999999999999999999999999999999999999999999999888655665555555544
Q ss_pred HHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 007627 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (595)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~ 238 (595)
++..+. .. ... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+||||.+|.|+..+++++
T Consensus 85 ~~~~~~-~g--~~~---~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll 158 (464)
T 3k9d_A 85 IKDMKT-IG--MLK---EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRII 158 (464)
T ss_dssp HTTCCC-SE--EEE---EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hhcccc-cc--eec---cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHH
Confidence 433211 00 000 012456788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEeeeCC-hhHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCC-CcceEEEcCCCCHH
Q 007627 239 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCDDVDVP 314 (595)
Q Consensus 239 ~~~l~~aGlp~g~v~vv~g~-~~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElG-Gk~p~IV~~daDl~ 314 (595)
.+++.++|+|+|++|+|+|. .+.+++|++ +||+|+||||+. +++++++++||+ +|+| ||+|+||++|||++
T Consensus 159 ~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~----v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 159 SEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSA----MVKAAYSSGTPA-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHH----HHHHHTTSSSCE-EEBCCCCCEEEECTTSCHH
T ss_pred HHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChH----HHHHHHhcCCcE-EeeCCCCCeEEECCCCCHH
Confidence 99999999999999999995 488999998 799999999998 467788899999 7888 99999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHH-------HhccCCCCC-CCCCCcccccCHHHHHHHHHH
Q 007627 315 HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSEKLQNL 386 (595)
Q Consensus 315 ~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~-------~~l~~G~~~-~~~~~~G~li~~~~~~~~~~~ 386 (595)
.|++.+++|+|+|+||.|++++|||||+++||+|+++|+++. +.+++|++. ++++++||+++.++++++.++
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999986 456778876 678899999999999999999
Q ss_pred HHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHH----HHhhcCCCCce
Q 007627 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV----KLANDSRYGLG 462 (595)
Q Consensus 387 i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi----~~aN~~~~gL~ 462 (595)
+++++.+|+++++||.. +++++|++. ||+||||++|++|+|+|||| +++|+++|||+
T Consensus 314 ~~~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~ 374 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHT 374 (464)
T ss_dssp TTCCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCe
Confidence 99999999999999871 567888865 89999999999999999997 79999999999
Q ss_pred eEEecCcHHHHHHHHHHhccCCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEEEc
Q 007627 463 CAVFSGSQHRAREIAAQIQCGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 530 (595)
Q Consensus 463 asVft~d~~~~~~~~~~l~~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~~~ 530 (595)
+||||+|.++++++++++++|+|+||++..+ ...+.+|||| +.||.|+++|..|+++|++.|+|...
T Consensus 375 a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 375 LIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred EEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 9999999999999999999999999998653 2346799998 78999999999999999999999753
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=3.5e-82 Score=689.52 Aligned_cols=400 Identities=15% Similarity=0.140 Sum_probs=328.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh----hhhhhhHHHh-HHHHHHHHHHh
Q 007627 87 EVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASLGEIMT-TCEKITWLLSE 161 (595)
Q Consensus 87 ~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~~Ei~~-~~~~l~~~~~~ 161 (595)
.+++++++|++||+.|+++|.++|.++|+++++.|++|+++|++++++|+||+. .++..+|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 8876679999 99999999999
Q ss_pred chhhcCcccccCCc-c---c-ccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHH
Q 007627 162 GEKWLKPEYRSSGR-S---M-IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 236 (595)
Q Consensus 162 ~~~~~~~~~~~~~~-~---~-~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~ 236 (595)
++++..+....... . . .+...++.++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++.++++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 88876432211110 0 0 1345689999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHHHHHHh----cCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcC
Q 007627 237 IIQAALAA----VGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (595)
Q Consensus 237 ~~~~~l~~----aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~ 309 (595)
++.++|.+ +|+|+|++|+|+ ++ +.++.|++ ++|+|+||||+.+|+.|++.| +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 99999999 999999999999 65 67888887 799999999999999999887 799999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC---CCCCCCCCCcccccCHHHHHHHHHH
Q 007627 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 386 (595)
Q Consensus 310 daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~---G~~~~~~~~~G~li~~~~~~~~~~~ 386 (595)
|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+ +++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcc
Confidence 99999999999999999999 99999999999999 9999999999999987 76521 445
Q ss_pred -HHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEE
Q 007627 387 -VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 465 (595)
Q Consensus 387 -i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asV 465 (595)
|++++ ++++||+ | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 310 ~i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 372 (468)
T 1vlu_A 310 YFDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAI 372 (468)
T ss_dssp HHHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEE
T ss_pred cccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEE
Confidence 66665 4667764 4 789997 7899999999999999999999999999999999999999999
Q ss_pred ecCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCC-----CcCCCCCCCCCcHHHHhccceeeEEEEcc
Q 007627 466 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFG-----GVKDSGFGRFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 466 ft~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfG-----G~~~SG~G~~~G~~gl~~~t~~k~v~~~~ 531 (595)
||+|.++++++++++++|+|+||++... .+.+||| |+|.||+|++ |++|+++|++.|+|+...
T Consensus 373 ~t~d~~~a~~~~~~l~aG~V~vN~~~~~--~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 373 VTENKANAEKFMKGVDSSGVYWNASTRF--ADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp ECSCHHHHHHHHHHCCCSEEEESSCGGG--CC-----------------------CCSGGGEEEEEEEECS
T ss_pred EeCCHHHHHHHHHhCCeeEEEEcCCCCC--CCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999999997653 3358999 9999999999 999999999999998754
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=7.7e-79 Score=660.42 Aligned_cols=393 Identities=19% Similarity=0.215 Sum_probs=332.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh----hhhhh-------hHHHhHHH
Q 007627 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCE 153 (595)
Q Consensus 85 ~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~-------~Ei~~~~~ 153 (595)
.+|+++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+. .++.. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 35543 37888888
Q ss_pred HHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 007627 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (595)
Q Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~ 233 (595)
.++++++..+.. . +..+......+...++.++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++.+
T Consensus 105 ~l~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI-G-EMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT-T-CEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc-C-ccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 888888765431 1 1111100012346789999999999999999 8 5899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEeeeCC-hh-HHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcC
Q 007627 234 YFRIIQAALAAVGAPENLVDVITGF-AE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (595)
Q Consensus 234 l~~~~~~~l~~aGlp~g~v~vv~g~-~~-~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~ 309 (595)
+.+++.++|.++|+|+|++|+|+|. .+ .++.|.. ++|+|+||||+.+|+.|++.+ +||+++|||||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 9999999999999999999999984 43 6777775 799999999999999999877 799999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccC---CCCCCCCCCcccccCHHHHHHHHHH
Q 007627 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL 386 (595)
Q Consensus 310 daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~---G~~~~~~~~~G~li~~~~~~~~~~~ 386 (595)
|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..++
T Consensus 258 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAV 319 (444)
T ss_dssp TCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHH
Confidence 99999999999999999999 9999999999999999999999999999987 6542 2456
Q ss_pred HHHHHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEe
Q 007627 387 VNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 466 (595)
Q Consensus 387 i~~a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVf 466 (595)
++++. .| ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 320 i~~a~-------------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 372 (444)
T 4ghk_A 320 LEAAG-------------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIV 372 (444)
T ss_dssp HHHTT-------------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEE
T ss_pred HHhcc-------------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 65542 11 12 35689999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC----CCCcHHHHhccceeeEEEEcc
Q 007627 467 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 467 t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G----~~~G~~gl~~~t~~k~v~~~~ 531 (595)
|+|.++++++++++++|+|+||++..+. +.+||||.|.||+| +++|++||++||+.|+|+...
T Consensus 373 t~d~~~a~~~a~~l~aG~V~vN~~~~~~--~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 373 TEDHDRAMRFLREVDSASVMVNASTRFA--DGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp CSBHHHHHHHHHHCCSSEEEEEECGGGC--STTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred eCCHHHHHHHHHhCCcceEEEcCCCccC--CCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999999999986543 45899999999998 789999999999999998765
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=4.7e-79 Score=658.99 Aligned_cols=391 Identities=19% Similarity=0.199 Sum_probs=341.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCCh----hhhhh-------hHHHhHHH
Q 007627 85 RAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTM----VDASL-------GEIMTTCE 153 (595)
Q Consensus 85 ~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~----~ea~~-------~Ei~~~~~ 153 (595)
-+++++++++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+. .++.. .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999986 56532 58999999
Q ss_pred HHHHHHHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHH
Q 007627 154 KITWLLSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCF 233 (595)
Q Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~ 233 (595)
.++++++..++ .. +..+......+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++.+
T Consensus 93 ~l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 93 ACETVIGLKDP-VG-EVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHhcccc-cC-ccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 99999877654 21 1111000001234688999999999999886 47899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCcEEeeeC-Ch-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcC
Q 007627 234 YFRIIQAALAAVGAPENLVDVITG-FA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCD 309 (595)
Q Consensus 234 l~~~~~~~l~~aGlp~g~v~vv~g-~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~ 309 (595)
+++++.++|.++|+|+|++|+|+| +. +.++.|.. ++|+|+||||+.+|+.|+++| +||+++|||||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 999999999999999999999998 44 45777775 899999999999999999988 599999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHH
Q 007627 310 DVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVND 389 (595)
Q Consensus 310 daDl~~aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~ 389 (595)
|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 246 dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------- 297 (427)
T 1o20_A 246 SADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------------------- 297 (427)
T ss_dssp TSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------------
T ss_pred CCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------------
Confidence 99999999999999999999 99999999999999999999999999987642
Q ss_pred HHhcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCc
Q 007627 390 ALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGS 469 (595)
Q Consensus 390 a~~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d 469 (595)
+.||.+ ..+ |+ ||| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 298 --------~~gg~~------~~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 358 (427)
T 1o20_A 298 --------VRGCEK------TRE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 358 (427)
T ss_dssp --------EEECHH------HHH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSC
T ss_pred --------eecChh------hhh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCC
Confidence 223331 012 34 896 34678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCCcccccCCCCCCCcCCCCCC----CCCcHHHHhccceeeEEEEcc
Q 007627 470 QHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 531 (595)
Q Consensus 470 ~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~SG~G----~~~G~~gl~~~t~~k~v~~~~ 531 (595)
.++++++++++++|+|+||+.... .+.+||||.|.||+| +++|++|+++||+.|+|+...
T Consensus 359 ~~~a~~~~~~l~~G~V~iN~~~~~--~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 359 YSNAKKFVSEIDAAAVYVNASTRF--TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHHCCSSEEEESSCGGG--CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHHhCCccEEEECCCCcc--CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 999999999999999999987553 345899999999997 478999999999999998754
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.5e-76 Score=642.47 Aligned_cols=415 Identities=18% Similarity=0.217 Sum_probs=344.9
Q ss_pred ecCCCHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhCCChhhhhhhHHHhHHHHH-HHH
Q 007627 80 FPALSRAEVDERVAQARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKI-TWL 158 (595)
Q Consensus 80 v~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~~~~~~e~Gk~~~ea~~~Ei~~~~~~l-~~~ 158 (595)
++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|.+|+++|++++++|+||+..|+...|+..+++.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4568999999999999999999999999999999999999999999999999999999999998665777667666 333
Q ss_pred HHhchhhcCcccccCCcccccccceEEEecceEEEEEcCcchhhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHH
Q 007627 159 LSEGEKWLKPEYRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 238 (595)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~ 238 (595)
.. .+... ..+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+||||.+|+++..+++++
T Consensus 81 ~~--~~~~g--~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 81 KD--EQTCG--ILEE---DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp TT--CCCSE--EC----------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred hh--ccccc--cccC---CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 22 11100 0111 12345788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcEEeeeCCh-hHHHHHHh--CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHH
Q 007627 239 QAALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPH 315 (595)
Q Consensus 239 ~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~--~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~ 315 (595)
.+++.++|+|+|++|+|+|.+ +.+++|++ ++|+|+||||+.+ +++|++++||+++|+|||||+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 999999999999999999954 88999998 8999999999985 4567789999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCceEEEccchHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCC
Q 007627 316 VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 395 (595)
Q Consensus 316 aa~~i~~~~f~n~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga 395 (595)
|++.+++|+|+|+||.|++++|||||+++||+|+++|+++ +||+++++++++++++++++...|+
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a 294 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNA 294 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECG
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCC
Confidence 9999999999999999999999999999999999999874 3899999999999999987766788
Q ss_pred eEeecCCCCCCCCCCCCcccCCee-------eecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCC----CCceeE
Q 007627 396 EILARGSFGHLSEGAVDQYFPPTV-------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR----YGLGCA 464 (595)
Q Consensus 396 ~vl~gG~~~~~~~~~~g~~~~PTv-------l~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~----~gL~as 464 (595)
++ +||..... ....|+|++||+ +.+++++|++++ |+||||++|++|+|+||||+++|++. |||++|
T Consensus 295 ~v-~G~~~~~~-~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~ 371 (452)
T 3my7_A 295 KI-VGQPATAI-AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSG 371 (452)
T ss_dssp GG-TTCCHHHH-HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEE
T ss_pred eE-ecCccchh-HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEE
Confidence 86 46652100 012589999998 778999999886 89999999999999999999999985 999999
Q ss_pred EecCcHHHHHH---HHHHhccCCeeecCCCcccccCCCCCCCcCCC-----------CCCCCCcH-----HHHhccceee
Q 007627 465 VFSGSQHRARE---IAAQIQCGVAAINDFASNYMCQSLPFGGVKDS-----------GFGRFAGV-----EGLRACCLVK 525 (595)
Q Consensus 465 Vft~d~~~~~~---~~~~l~~G~v~IN~~~~~~~~~~~PfGG~~~S-----------G~G~~~G~-----~gl~~~t~~k 525 (595)
|||+|.+++++ +++++++|+|+||++ .||||+|.. |.|.++|. -+.+++.+.|
T Consensus 372 i~t~d~~~a~~i~~~a~~l~~G~V~VN~~--------~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~ 443 (452)
T 3my7_A 372 LYTNQDVNADRIRYFGDKMKTARILINIP--------TTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKK 443 (452)
T ss_dssp EESCTTTCHHHHHHHHHHCCCSEEEESCC--------CC----------------------------CCCCCGGGGEEEE
T ss_pred EEcCCHHHHHHHHHHHHhCCEEEEEECCC--------CCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeee
Confidence 99999877777 999999999999984 356655531 44544443 4667777888
Q ss_pred EEEEcc
Q 007627 526 SVVEDR 531 (595)
Q Consensus 526 ~v~~~~ 531 (595)
+|.+.+
T Consensus 444 ~v~~~~ 449 (452)
T 3my7_A 444 TVAKRA 449 (452)
T ss_dssp EEECCC
T ss_pred EEEeec
Confidence 876543
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=93.45 E-value=8.5 Score=40.11 Aligned_cols=258 Identities=17% Similarity=0.191 Sum_probs=139.0
Q ss_pred cccceEEEecceEEEEEcCcc---hhhHhhHHHHHHHHhcCCEEE--EecCCCchhHHHHHHHHHHHHHHhcCCCCCcEE
Q 007627 179 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNGIV--IKVSENASWSGCFYFRIIQAALAAVGAPENLVD 253 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~N---~P~~~~~~~l~~ALaaGN~VV--lKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~ 253 (595)
+.....++.|+--|++-+|.- ||-. .+...+||-.||..=| .-|.+..-.....++ +.+.+|..+
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~-----AA~l~Gv~e---- 189 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYPSS-VLMNAVPAKVAGVPELIMAVPAPRGELNALVLA-----AAYISGVDR---- 189 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCHHH-HHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH-----HHHHHTCCE----
T ss_pred CCEEEEEEEEecceeEEeeCCCCchhhH-HHHhhccHHHhCCCeEEEecCCCCCCccHHHHH-----HHHhcCCcE----
Confidence 445567889999999999954 6644 5556789999998633 334322111111111 123467754
Q ss_pred eee-CChhHHHHHHh------CCCEEEEeCChhHHHHHHHHhhcCCCcEeecCCCcceEEE-cCCCCHHHHHHHHHHHHH
Q 007627 254 VIT-GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV-CDDVDVPHVAQIAVRAAL 325 (595)
Q Consensus 254 vv~-g~~~~~~~L~~------~vd~I~ftGS~~~g~~v~~~aa~~l~pv~lElGGk~p~IV-~~daDl~~aa~~i~~~~f 325 (595)
+.. |+...-.+|.- .+|+|+=-|..=|..+ +.....-.-+=+.-|-..-+|| ++++|.+..|..++.-+=
T Consensus 190 Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAE 267 (423)
T 4gic_A 190 VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVFGQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAE 267 (423)
T ss_dssp EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHBTTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHT
T ss_pred EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhcCCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhc
Confidence 222 43444444432 8999998888765432 1111111112222233333344 334999998888776543
Q ss_pred HcCCCCCCCCceEEEccc--hHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCC
Q 007627 326 QSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 403 (595)
Q Consensus 326 ~n~GQ~C~a~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~gG~~ 403 (595)
+.. .+ +-++|..+ ..++..+.+.+.++.+. . .+..++-++. .|
T Consensus 268 Hd~----~a-~~iLvT~s~~la~~V~~~i~~~l~~l~---------------r---~~i~~~sl~~---~g--------- 312 (423)
T 4gic_A 268 HDE----DA-QAILISPDAAHLEAVQASIERLLPGME---------------R---AEVIRTSLER---RG--------- 312 (423)
T ss_dssp TCT----TC-EEEEEESCHHHHHHHHHHHHHHGGGCT---------------T---HHHHHHHHHH---HC---------
T ss_pred cCC----CC-eEEEEeCcHHHHHHHHHHHHHHHhhCc---------------c---HHHHHHHHhc---Cc---------
Confidence 322 22 34555443 34444444444444331 0 1111211111 11
Q ss_pred CCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHhc-c
Q 007627 404 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ-C 482 (595)
Q Consensus 404 ~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l~-~ 482 (595)
.++.++|++||++++|..- +=-.-|.++|. +.+..+++ +
T Consensus 313 ------------------------------------~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~---~~~l~~i~nA 352 (423)
T 4gic_A 313 ------------------------------------GMILVDDLEQAAAVANRIA-PEHLELSVESP---EVLVESIRNA 352 (423)
T ss_dssp ------------------------------------EEEECSSHHHHHHHHHHHC-CSEEEEESSCH---HHHGGGCCCC
T ss_pred ------------------------------------eEEEEeehHHHHHHHHhhC-hHHhhhhhCCH---HHHHhhCcEe
Confidence 2445689999999999832 22456777775 45677776 9
Q ss_pred CCeeecCCCcc-------cccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 483 GVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 483 G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
|.|++..+..- ..++.||- +|..|+.+.-+.+.|...-++.
T Consensus 353 GaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 353 GAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp SEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEEEE
T ss_pred ceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeEE
Confidence 99999764211 11334554 5677787777888887665543
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=86.52 E-value=34 Score=35.72 Aligned_cols=254 Identities=17% Similarity=0.155 Sum_probs=142.4
Q ss_pred cccceEEEecceEEEEEcCc---chhhHhhHHHHHHHHhcCCEEEEecCC--CchhHHHHHHHHHHHHHHhcCCCCCcEE
Q 007627 179 HKKAKVEFHPLGVVGAIVSW---NYPFHNIFNPMLAAVFSGNGIVIKVSE--NASWSGCFYFRIIQAALAAVGAPENLVD 253 (595)
Q Consensus 179 ~~~~~v~~~PlGVV~~I~p~---N~P~~~~~~~l~~ALaaGN~VVlKps~--~~p~s~~~l~~~~~~~l~~aGlp~g~v~ 253 (595)
|.....++.|+--|++-+|. -||- ..+...+||-.||..=|+-.+| ..|.+ ++ +.+.+|.++ +-
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~-----AA~l~Gv~e--Iy 182 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI---LY-----AAQLCGVQD--VF 182 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH---HH-----HHHHTTCCE--EE
T ss_pred CcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHH---HH-----HHHHcCCCE--Ee
Confidence 34455678999999999996 4664 4555678999999865544443 33322 11 123477754 22
Q ss_pred eeeCChhHHHHHHh------CCCEEEEeCChhHH--HHHHHHhhcCCCcEeecC-CCcceEEE--cCCCCHHHHHHHHHH
Q 007627 254 VITGFAETGEALVS------SVDKIIFVGSPGVG--RMIMRNASKTLTPVTLEL-GGKDAFIV--CDDVDVPHVAQIAVR 322 (595)
Q Consensus 254 vv~g~~~~~~~L~~------~vd~I~ftGS~~~g--~~v~~~aa~~l~pv~lEl-GGk~p~IV--~~daDl~~aa~~i~~ 322 (595)
-+ |+...-.+|.- .+|+|+=.|..=|. |.....- .. .|-..+ -|-+=+.| +++||-+..|..++.
T Consensus 183 ~v-GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~--~G-~VgIDm~AGPSEilViAD~tAnp~~vAaDLLs 258 (434)
T 1kae_A 183 NV-GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR--LD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLS 258 (434)
T ss_dssp EC-CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHC--TT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHH
T ss_pred ec-ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhh--cC-ccccCCCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 12 43444444432 89999888876543 2222110 11 122221 33443333 345899988887765
Q ss_pred HHHHcCCCCCCCCceEEEccc--hHHHHHHHHHHHHHhccCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeec
Q 007627 323 AALQSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILAR 400 (595)
Q Consensus 323 ~~f~n~GQ~C~a~~rv~V~~~--v~d~f~~~L~~~~~~l~~G~~~~~~~~~G~li~~~~~~~~~~~i~~a~~~Ga~vl~g 400 (595)
-+=+.. .+ +-++|..+ ..++..+.+.+.++.+. + . +.++.+.
T Consensus 259 QAEHd~----~a-~aiLvT~s~~la~~V~~ev~~ql~~lp----------------r--~----~ia~~sl--------- 302 (434)
T 1kae_A 259 QAEHGP----DS-QVILLTPAADMARRVAEAVERQLAELP----------------R--A----ETARQAL--------- 302 (434)
T ss_dssp HHTTCT----TC-EEEEEESCHHHHHHHHHHHHHHHTTCT----------------T--H----HHHHHHH---------
T ss_pred HhccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHhCC----------------h--H----HHHHHHH---------
Confidence 543322 22 34455443 33444444444333321 0 0 1122221
Q ss_pred CCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHhhcCCCCceeEEecCcHHHHHHHHHHh
Q 007627 401 GSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 480 (595)
Q Consensus 401 G~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~aN~~~~gL~asVft~d~~~~~~~~~~l 480 (595)
..- .|+-++|++||++++|..- +=-.-|.++|. +.++.++
T Consensus 303 -----------------------------------~~~-~ii~v~~l~ea~~~~N~~A-PEHLel~~~dp---~~~l~~I 342 (434)
T 1kae_A 303 -----------------------------------NAS-RLIVTKDLAQCVEISNQYG-PEHLIIQTRNA---RELVDSI 342 (434)
T ss_dssp -----------------------------------TTC-EEEECSSHHHHHHHHHHHC-CSEEEEESTTH---HHHGGGC
T ss_pred -----------------------------------HcC-eEEEECCHHHHHHHHHHhh-hHhhhhhhcCH---HHHHhhc
Confidence 111 3556789999999999832 12467778876 4566777
Q ss_pred c-cCCeeecCCCc-------ccccCCCCCCCcCCCCCCCCCcHHHHhccceeeEEE
Q 007627 481 Q-CGVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 528 (595)
Q Consensus 481 ~-~G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~G~~gl~~~t~~k~v~ 528 (595)
+ +|.|++..+.. ...++.||- +|+.|+.+.-+.+.|...-++.
T Consensus 343 ~nAGaIFlG~~tpe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 343 TSAGSVFLGDWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp CSCSEEEESTTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEEE
T ss_pred CcccchhcCCCCchhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeEE
Confidence 5 89999997522 123455665 4677787777888887665543
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=70.63 E-value=8.5 Score=31.65 Aligned_cols=60 Identities=20% Similarity=0.237 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHHHH-hcCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHHh
Q 007627 376 LLEHSEKLQNLVNDAL-DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 454 (595)
Q Consensus 376 ~~~~~~~~~~~i~~a~-~~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~a 454 (595)
+++.+++..+.+..++ +.|++++..|.. |.++.+-. .+-+.|+.|+|.++|.++.
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~-------------~~~~eG~~-----------~~~~viieFpS~~aa~~~~ 71 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS-------------VTELEGTA-----------RARNVVIEFPSVQHAIDCY 71 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC-------------EEEEESCC-----------CSEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC-------------ceEEecCC-----------cCeEEEEECCCHHHHHHHH
Confidence 4555555555555554 358888876652 44554321 2367899999999999999
Q ss_pred hcCCC
Q 007627 455 NDSRY 459 (595)
Q Consensus 455 N~~~~ 459 (595)
|+.+|
T Consensus 72 ~s~~Y 76 (99)
T 2fiu_A 72 NSPEY 76 (99)
T ss_dssp HSHHH
T ss_pred cCHHH
Confidence 98654
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=53.38 E-value=17 Score=32.41 Aligned_cols=113 Identities=13% Similarity=0.127 Sum_probs=75.9
Q ss_pred eEEEEEcCcch-hhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeee--CChhHHHHHH
Q 007627 190 GVVGAIVSWNY-PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT--GFAETGEALV 266 (595)
Q Consensus 190 GVV~~I~p~N~-P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~--g~~~~~~~L~ 266 (595)
|.|++++.-+- +-...+..-...+.+|-.++- |.-|+.++.+ ..|++-..|+=++ |++..++.+.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa~~L~e-------~~Gl~v~~v~k~~eGG~p~I~d~I~ 79 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTGNLISR-------ATGMNVNAMLSGPMGGDQQVGALIS 79 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHHHHHHH-------HHCCCCEEECCGGGTHHHHHHHHHH
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHHHHHHH-------HhCceeEEEEecCCCCCchHHHHHH
Confidence 76666655443 555555556667777988874 3445544332 1799987665443 2235666666
Q ss_pred h-CCCEEEEeCC-------hhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCC
Q 007627 267 S-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329 (595)
Q Consensus 267 ~-~vd~I~ftGS-------~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~G 329 (595)
+ .+|.|+||=+ ..-+..|.+.|..+.+|+.--+ ..|+.++.+.+++..
T Consensus 80 ~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 80 EGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp TTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 6 9999999976 3467889999999999987655 456677777666654
No 57
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=50.74 E-value=25 Score=28.40 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=40.9
Q ss_pred cCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHHH
Q 007627 375 CLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKL 453 (595)
Q Consensus 375 i~~~~~~~~~~~i~~a~~-~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~~ 453 (595)
.+++.+++..+.+..+++ -|++++..| . +.++.+-. -..-+.|+.|+|.+.|.++
T Consensus 14 ~d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~-------------~~~lEG~~----------~~~~~viieFps~~aa~a~ 69 (94)
T 3lo3_A 14 KDAEKLQQYGARVASTLAKYSGEVLVKG-S-------------VEQLHGKF----------EHKAQVILEFPSREDAYNW 69 (94)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCEEEEEE-E-------------CEEEESCC----------CCSEEEEEEESSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEc-c-------------cccccCCC----------CCCeEEEEECCCHHHHHHH
Confidence 356666666666666554 478887766 3 33444321 1256789999999999999
Q ss_pred hhcCCC
Q 007627 454 ANDSRY 459 (595)
Q Consensus 454 aN~~~~ 459 (595)
.|+.+|
T Consensus 70 y~SpeY 75 (94)
T 3lo3_A 70 YHSEEY 75 (94)
T ss_dssp HHSHHH
T ss_pred HCCHHH
Confidence 998665
No 58
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=49.39 E-value=15 Score=33.62 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=80.7
Q ss_pred eEEEecc-eEEEEEcCcch-hhHhhHHHHHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeee--CC
Q 007627 183 KVEFHPL-GVVGAIVSWNY-PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT--GF 258 (595)
Q Consensus 183 ~v~~~Pl-GVV~~I~p~N~-P~~~~~~~l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~--g~ 258 (595)
....-|. |.|++++.-+- +-...+..-...+.+|-.++- |.-|+.++.+ ..|++-..|+=++ |+
T Consensus 20 ~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~L~e-------~~Gl~v~~v~k~~eGG~ 87 (178)
T 1vmd_A 20 YKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGALLQE-------KLGLKVHRLKSGPLGGD 87 (178)
T ss_dssp EEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHHHHH-------HHCCCCEECSCGGGTHH
T ss_pred eeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHHHHH-------HhCceeEEEeecCCCCC
Confidence 3444454 87777765544 555556666667778998874 4556554332 1799977665443 22
Q ss_pred hhHHHHHHh-CCCEEEEeCC-------hhHHHHHHHHhhcCCCcEeecCCCcceEEEcCCCCHHHHHHHHHHHHHHcCC
Q 007627 259 AETGEALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 329 (595)
Q Consensus 259 ~~~~~~L~~-~vd~I~ftGS-------~~~g~~v~~~aa~~l~pv~lElGGk~p~IV~~daDl~~aa~~i~~~~f~n~G 329 (595)
+..++.+.+ .||.|+||=+ ..-+..|.+.|..+.+|+.--+ ..|+.++.+.+++..
T Consensus 88 pqI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 88 QQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred chHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 356666666 9999999976 3357889999999999987665 456777777777664
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=48.34 E-value=20 Score=31.48 Aligned_cols=58 Identities=19% Similarity=0.170 Sum_probs=44.2
Q ss_pred HHhcCCCCCcEEeeeCC------hhHHHHHHh-CCCEEEEeCCh-----hHHHHHHHHhhcCCCcEeecC
Q 007627 242 LAAVGAPENLVDVITGF------AETGEALVS-SVDKIIFVGSP-----GVGRMIMRNASKTLTPVTLEL 299 (595)
Q Consensus 242 l~~aGlp~g~v~vv~g~------~~~~~~L~~-~vd~I~ftGS~-----~~g~~v~~~aa~~l~pv~lEl 299 (595)
|.+.|+|-..|+-++.+ +...+.+.+ .+|.|++|-+. .-+..|.+.|.++.+|++-.+
T Consensus 63 L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 63 LNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 34689998877766532 446666666 99999998665 368889999999999988765
No 60
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=43.34 E-value=8.8 Score=33.55 Aligned_cols=79 Identities=14% Similarity=0.091 Sum_probs=51.6
Q ss_pred HHHHHhcCCEEEEecCCCchhHHHHHHHHHHHHHHhcCCCCCcEEeee-C-ChhHHHHHHh-CCCEEEEeCC-------h
Q 007627 209 MLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT-G-FAETGEALVS-SVDKIIFVGS-------P 278 (595)
Q Consensus 209 l~~ALaaGN~VVlKps~~~p~s~~~l~~~~~~~l~~aGlp~g~v~vv~-g-~~~~~~~L~~-~vd~I~ftGS-------~ 278 (595)
-...+.+|-.++- |.-|+.++.+ ..|++-..|+=++ | ++..++.+.+ .+|.|+||=+ .
T Consensus 24 ~~~~ll~Gf~l~A-----T~gTa~~L~e-------~~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~h~ 91 (134)
T 2xw6_A 24 RHREVLARFPLVA-----TGTTGRRIEE-------ATGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHE 91 (134)
T ss_dssp HTHHHHTTSCEEE-----CHHHHHHHHH-------HHCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCTTS
T ss_pred HHHHHhCCCEEEE-----ccHHHHHHHH-------hhCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCCcc
Confidence 3344555666553 4445543322 1799887776555 3 3356777777 9999999977 2
Q ss_pred hHHHHHHHHhhcCCCcEeecC
Q 007627 279 GVGRMIMRNASKTLTPVTLEL 299 (595)
Q Consensus 279 ~~g~~v~~~aa~~l~pv~lEl 299 (595)
.-+..|.+.|..+-+|+.--+
T Consensus 92 ~D~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 92 PDVQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp CCSHHHHHHHHHHTCCEECSH
T ss_pred chHHHHHHHHHHcCCCeEcCH
Confidence 346788898888888876554
No 61
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=35.22 E-value=47 Score=29.17 Aligned_cols=65 Identities=14% Similarity=0.177 Sum_probs=43.5
Q ss_pred ccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCCcccCCeeeecCCCCCcccccccccCceeEEeeCCHHHHHH
Q 007627 374 LCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 452 (595)
Q Consensus 374 li~~~~~~~~~~~i~~a~~-~Ga~vl~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eAi~ 452 (595)
+.+++.+++..+....+++ .|++++..|.. +.++.+-.. |. -.-+.|+.|.|.+.|.+
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~-------------~~~lEG~~~-------e~-~~~~viieFPS~~aa~a 103 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF-------------ELMLIGPQD-------EH-WDHVFIAEYPSVAAFVE 103 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE-------------EEEEESCTT-------CC-CSEEEEEEESCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC-------------ceeEECCCC-------CC-CCeEEEEECCCHHHHHH
Confidence 5567777777777766654 58888876652 234443211 11 14578999999999999
Q ss_pred HhhcCCC
Q 007627 453 LANDSRY 459 (595)
Q Consensus 453 ~aN~~~~ 459 (595)
+.|+..|
T Consensus 104 ~y~SpeY 110 (143)
T 3hhl_A 104 MIRDPVY 110 (143)
T ss_dssp HHHCHHH
T ss_pred HHcCHHH
Confidence 9998654
No 62
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=27.59 E-value=1.5e+02 Score=21.72 Aligned_cols=36 Identities=6% Similarity=0.126 Sum_probs=28.5
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 94 QARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 94 ~A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
.++.....|..+|.++|..+.....+.-.++..++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667789999999999999888777777766654
No 63
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.79 E-value=38 Score=30.86 Aligned_cols=49 Identities=14% Similarity=0.173 Sum_probs=40.5
Q ss_pred cccccCceeEEeeCCHHHHHHHh----hcCCCCceeEEecCcHHHHHHHHHHh
Q 007627 432 EEAFGPIMPIMKFNTDEEVVKLA----NDSRYGLGCAVFSGSQHRAREIAAQI 480 (595)
Q Consensus 432 eE~FGPVl~v~~~~~~~eAi~~a----N~~~~gL~asVft~d~~~~~~~~~~l 480 (595)
||-||+..+..--.+.+||++.| .....-|-.|+++.+......+.+++
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~ 77 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQM 77 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHT
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHh
Confidence 57788888888778999999999 77777899999998776677776655
No 64
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.19 E-value=2e+02 Score=22.24 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=27.9
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhHHHHH
Q 007627 95 ARKAQKVWAKSSFKQRRQFLRILLKYIIEHQELIC 129 (595)
Q Consensus 95 A~~A~~~W~~~~~~~R~~~L~~l~~~l~~~~~~l~ 129 (595)
++.....|..+|.++|..+.......-..+..++.
T Consensus 49 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 49 SKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556779999999999998888887777776654
Done!