BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007632
(595 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule OS=Arabidopsis thaliana GN=SE PE=1
SV=2
Length = 720
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/523 (74%), Positives = 438/523 (83%), Gaps = 26/523 (4%)
Query: 74 LDRPPPNRRGPDYYDRNRSPPPPMPRERDRDYKRRSTVSPPPPPLPYRDRRHSPPPRRSP 133
++RPPPNRR +R+RSP PP PR RDYKRR ++SPP PYRDRRHSPP RRSP
Sbjct: 63 IERPPPNRR-----ERDRSPLPP-PR---RDYKRRPSLSPP---PPYRDRRHSPPQRRSP 110
Query: 134 PYKRSRRDDGGYEPRRGSPRGGFGP-DRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGR 192
P KR RRDD GY+ RRGSPRGG+GP DRRFGYD+ GGY+REMGGRPGYGDERPHGRF GR
Sbjct: 111 PQKRYRRDDNGYDGRRGSPRGGYGPPDRRFGYDHGGGYDREMGGRPGYGDERPHGRFMGR 170
Query: 193 SSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDILPAEAERRYQEYK 252
YQ +W+ RGGYGDASN+G+ QR+GLMSYKQFIQELEDDILP+EAERRYQEYK
Sbjct: 171 ----YQ----DWEGGRGGYGDASNSGNPQRDGLMSYKQFIQELEDDILPSEAERRYQEYK 222
Query: 253 SEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTLDLG 312
SEYI+TQKR FF+ HK+E+WLK+KYHPTNL++VIERRNDLA+KVAKDFLLDLQSGTLDLG
Sbjct: 223 SEYITTQKRAFFNTHKEEDWLKNKYHPTNLLSVIERRNDLAQKVAKDFLLDLQSGTLDLG 282
Query: 313 PSVNASSSNKLGQTSEPNSDDDVDNGGKRRRHGRGPAKETDLLSAAPKAHPISSEPRRIQ 372
P+V A NK G+TSEPNS+D+ GKR+RHG G AKE +LLSAAPKA +S+P+RI
Sbjct: 283 PAVTA--LNKSGRTSEPNSEDEAAGVGKRKRHGMGGAKENELLSAAPKAPSFTSDPKRIL 340
Query: 373 VDIEQAQALVRKLDSEKGITENILCGSDNDKMNREKSH-GSTGPVIIIRGLTSVKGLEGV 431
D+EQ QALVRKLDSEK I EN+L GS+ +K REK H GSTGPV+IIRGLTSVKGLEGV
Sbjct: 341 TDVEQTQALVRKLDSEKKIEENVLQGSETEKSGREKLHSGSTGPVVIIRGLTSVKGLEGV 400
Query: 432 ELLDTLITYLWRIHGVDYYGMVETSEAKGLRHVRAEGKSSDITNNGAEWEKKLDFRWQER 491
ELLDTL+TYLWR+HG+DYYG VET+EAKGLRHVRAEGK SD G E E K D WQER
Sbjct: 401 ELLDTLVTYLWRVHGLDYYGKVETNEAKGLRHVRAEGKVSDA--KGDENESKFDSHWQER 458
Query: 492 LRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKH 551
L+ QDPLE+M AK+KIDAAA +ALDP VRKIRDEKYGWKYGCGAKGCTKLFHAAEFV+KH
Sbjct: 459 LKGQDPLEVMAAKEKIDAAATEALDPHVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKH 518
Query: 552 LKLKHPELVIELTSKVREELYFQNYMNDPDAPGGTPVMQQPMP 594
LKLKH ELV ELT+KVREELYFQNYMNDP+APGG P QQ P
Sbjct: 519 LKLKHTELVTELTTKVREELYFQNYMNDPNAPGGQPATQQSGP 561
>sp|B4LIK8|SRRT_DROVI Serrate RNA effector molecule homolog OS=Drosophila virilis GN=Ars2
PE=3 SV=1
Length = 963
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 25/200 (12%)
Query: 124 RHSPPPRRSPPYKRSRRDDGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDE 183
R+ P R PP KR R D G E R +PR G+ P + Y+
Sbjct: 81 RYGSPGREMPPAKRMRPDWGESE-MRSNPRFGYDP--YLVQAWNDHYQ------------ 125
Query: 184 RPHGRFAGRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDILPAE 243
+ S+ + S PS S+R + N+ + + +++ KQF+ +++I +E
Sbjct: 126 ------SLHSAYSHSSHPS---SARESAPNVVNSDTQTQPAMLTLKQFLDTQDENISDSE 176
Query: 244 AERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLD 303
R+Y EYK+++ Q FF AHKDEEW K+KYHP + V E + ++ FL
Sbjct: 177 VMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVRRSEEQRGFLKRRTDVFLEL 236
Query: 304 LQSGTLDLGPSVNASSSNKL 323
L++GT+ V++S ++ L
Sbjct: 237 LENGTIG-SVKVDSSQADSL 255
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 484
+ +LD L+ YL +H VDYY E G+ H R +N+ E+ K
Sbjct: 726 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPMRVTSNDVQEYIKAY 785
Query: 485 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 544
D + Q+ L L K+ ++ FV+ E K+ C G K F
Sbjct: 786 DGKLQQFLTKSVQLSDDEIKELGAKNPETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 843
Query: 545 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 844 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 879
>sp|Q17FR9|SRRT_AEDAE Serrate RNA effector molecule homolog OS=Aedes aegypti GN=Ars2 PE=3
SV=1
Length = 937
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 108/249 (43%), Gaps = 49/249 (19%)
Query: 82 RGPDYYDRNRS----PPPPMPRERDRDYKRRSTVSPPPPPLPYRDRRHSPPPRRSPPYKR 137
RG D DR+R PR+ RDY+ PPP RDR +SP R PP KR
Sbjct: 28 RGADRADRSRGRDEWAERGRPRQDYRDYR--------PPP---RDRGYSPT-REGPPMKR 75
Query: 138 SRRDDGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGY 197
R D G+G D RP +G P+G + G + +
Sbjct: 76 MRGD-------------GWGDD----------------ARPRFGGHEPYGMYGGYNHDHF 106
Query: 198 QSGPSEWDSSRGGYG--DASNTGSTQRE-GLMSYKQFIQELEDDILPAEAERRYQEYKSE 254
P+ GG + + G Q + +M+ KQF+ +D I +EA ++Y +YK E
Sbjct: 107 GMHPAGPYGHPGGLHPREQQSAGDMQTQPCMMTLKQFLATQDDSISDSEAIQKYNDYKLE 166
Query: 255 YISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTLDLGPS 314
+ Q FF AHKDEEW K KYHP + E + ++ F+ L G + S
Sbjct: 167 FKRQQLNEFFVAHKDEEWFKMKYHPEESLKRKEEQFGFLKRRCDVFVELLDHGDIS-KVS 225
Query: 315 VNASSSNKL 323
V+ S+++ L
Sbjct: 226 VDTSNTDPL 234
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGA-EWEKK 483
+E+LD LI YL +H +D+Y E G+ H R + +T+N E+ +
Sbjct: 697 IEVLDKLILYLRVVHSIDFYNHCEYPYEDEMPNRCGIIHARGPPPQNKVTSNEIQEYIRT 756
Query: 484 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDA-LDPFVRKIRDEKYGWKYGCGAKGCTKLF 542
+ + L LE K K+ A +A ++ F++ E K+ C G K F
Sbjct: 757 FEGKMGSFLARAVDLEEEEMK-KLGAKDAEAEVEKFIQANTQELAKDKWLCPLSG--KKF 813
Query: 543 HAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMND------PDAPGGT 586
+FV KH+ KH E V E+ +V YF NY+ D P+ PG T
Sbjct: 814 KGPDFVRKHIFNKHNEKVDEVRKEVE---YFNNYLKDTKRPQLPEHPGNT 860
>sp|B3MJ69|SRRT_DROAN Serrate RNA effector molecule homolog OS=Drosophila ananassae
GN=Ars2 PE=3 SV=1
Length = 948
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 148 RRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSEWDSS 207
R GSP P +R D+ G GD RP+ RF G Q+ + S
Sbjct: 81 RYGSPGRDLPPAKRMRPDW------------GDGDVRPNPRFGGYDPYLMQAWNDHYQSI 128
Query: 208 RGGYGDASNTGSTQREG-----------LMSYKQFIQELEDDILPAEAERRYQEYKSEYI 256
Y S+ + G +++ KQF+ +++I +E R+Y EYK+++
Sbjct: 129 HSAYSHGSHMPPVRESGGSGGDSLTQPAMLNLKQFLDTQDENISDSEVMRKYTEYKTDFK 188
Query: 257 STQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTLDLGP--S 314
Q FF AHKDEEW K+KYHP + V E + ++ F+ L++GT+ S
Sbjct: 189 RQQLNEFFVAHKDEEWFKNKYHPEDSVRRAEEQRGFLKRRTDVFVELLENGTIGSVKVDS 248
Query: 315 VNASSSNKLGQTS----EPNSDDDVDNGGKR--------RRHGRGPAKETDLLSAAPK-- 360
V + ++ T E +D+D+ ++ R+H P K D + + K
Sbjct: 249 VQGDALIRVLDTCVIKLEGGTDEDLKALDEKPKETPVYERKHDPAPVKAVDEVKSPKKET 308
Query: 361 ---AHPISSEPRRIQV 373
A P+ P+R V
Sbjct: 309 EKEASPVIVSPQRKSV 324
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 484
+ +LD L+ YL +H VDYY E G+ H R S +N+ E+ K
Sbjct: 711 LAVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPSRVTSNDIHEYVKTY 770
Query: 485 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 544
+ + Q+ L L KD A ++ FV+ E K+ C G K F
Sbjct: 771 ESKLQQFLTKTALLSDEETKDLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 828
Query: 545 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 829 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 864
>sp|B3N3F7|SRRT_DROER Serrate RNA effector molecule homolog OS=Drosophila erecta GN=Ars2
PE=3 SV=1
Length = 947
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 144 GYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDE--RPHGRFAGRSSGGYQSGP 201
G PR GSP P +R RP +GD RP+ RF G Q+
Sbjct: 75 GARPRYGSPGRDLPPAKRM--------------RPDWGDADLRPNPRFGGYDPYLMQAWN 120
Query: 202 SEWDSSRGGYGDASNT----------GSTQRE-GLMSYKQFIQELEDDILPAEAERRYQE 250
+ S Y A + G T + +++ KQF+ +++I +E R+Y E
Sbjct: 121 DHYQSMHSAYSHAGHAPPVRESIGGGGDTLTQPAMLNLKQFLDTQDENISDSEVMRKYTE 180
Query: 251 YKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTL 309
YK+++ Q FF AHKDEEW K+KYHP + V + + ++ F+ L++GT+
Sbjct: 181 YKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKRSDEQRGFLQRRTDVFVELLENGTI 239
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 484
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 710 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPVRVTNNDVQEYIKTY 769
Query: 485 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 544
+ + Q+ L L KD ++ FV+ E K+ C G K F
Sbjct: 770 ESKLQQFLTKTVLLSDEEIKDLGAKDPETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 827
Query: 545 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 863
>sp|Q28WQ8|SRRT_DROPS Serrate RNA effector molecule homolog OS=Drosophila pseudoobscura
pseudoobscura GN=Ars2 PE=3 SV=2
Length = 951
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 129 PRRSPPYKRSRRDDGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGR 188
PR P Y R G R GSP P +R D+ G GD RP R
Sbjct: 61 PRHRPDYSDYR--GPGPRARYGSPVRDMPPPKRMRSDW------------GDGDGRPGPR 106
Query: 189 FAGRSSGGYQSGPSEWDSSRGGYGDASNT----------GSTQRE-GLMSYKQFIQELED 237
+ G Q+ + S Y AS+ G T + +++ KQF+ ++
Sbjct: 107 YGGYDPYLMQAWTDHYQSMHSAYHHASHPPPVRELPIIGGDTLTQPAMLNLKQFLDTQDE 166
Query: 238 DILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVA 297
+I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V E + R+
Sbjct: 167 NISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVNRSEEQRGFLRRRT 226
Query: 298 KDFLLDLQSGTLDLGPSVNASSSN 321
F+ L++GT+ SV SS+
Sbjct: 227 DVFVELLENGTIG---SVKVDSSH 247
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKK- 483
+ +LD L+ YL +H VDYY E G+ H R S +N E+ K
Sbjct: 715 LSVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPSRVTSNELNEYIKSY 774
Query: 484 ----LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCT 539
L F + L S+D ++ + AK+ A ++ FV+ E K+ C G
Sbjct: 775 EGKLLQFLTKTALLSEDQIKDLGAKN-----ADTEVEKFVQANTQELAKDKWLCPLSG-- 827
Query: 540 KLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
K F EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 KKFKGPEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 868
>sp|B4H732|SRRT_DROPE Serrate RNA effector molecule homolog OS=Drosophila persimilis
GN=Ars2 PE=3 SV=1
Length = 951
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 129 PRRSPPYKRSRRDDGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGR 188
PR P Y R G R GSP P +R D+ G GD RP R
Sbjct: 61 PRHRPDYSDYR--GPGPRARYGSPVRDMPPPKRMRSDW------------GDGDGRPGPR 106
Query: 189 FAGRSSGGYQSGPSEWDSSRGGYGDASNT----------GSTQRE-GLMSYKQFIQELED 237
+ G Q+ + S Y AS+ G T + +++ KQF+ ++
Sbjct: 107 YGGYDPYLMQAWTDHYQSMHSAYHHASHPPPVRELPIIGGDTLTQPAMLNLKQFLDTQDE 166
Query: 238 DILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVA 297
+I +E R+Y EYK+++ Q FF AHKDEEW K+KYHP + V E + R+
Sbjct: 167 NISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVNRSEEQRGFLRRRT 226
Query: 298 KDFLLDLQSGTLDLGPSVNASSSN 321
F+ L++GT+ SV SS+
Sbjct: 227 DVFVELLENGTIG---SVKVDSSH 247
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKK- 483
+ +LD L+ YL +H VDYY E G+ H R S +N E+ K
Sbjct: 715 LSVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPSRVTSNELNEYIKSY 774
Query: 484 ----LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCT 539
L F + L S+D ++ + AK+ A ++ FV+ E K+ C G
Sbjct: 775 EGKLLQFLTKTALLSEDQIKDLGAKN-----ADTEVEKFVQANTQELAKDKWLCPLSG-- 827
Query: 540 KLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
K F EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 KKFKGPEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 868
>sp|Q5TUF1|SRRT_ANOGA Serrate RNA effector molecule homolog OS=Anopheles gambiae GN=Ars2
PE=3 SV=3
Length = 967
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 109/253 (43%), Gaps = 53/253 (20%)
Query: 75 DRPPPNRRGPDYYDRNRSPPPPMPRERDRDYKRRSTVSPPPPPLPYRDRRHSPPPRRSPP 134
DRP +R D+ DR R PR+ RDY+ PPP RDR +SP R P
Sbjct: 34 DRPDRSRGRDDWPDRVR------PRQDYRDYR--------PPP---RDRGYSPA-REGPT 75
Query: 135 YKRSRRDDGGYEPR-RGSPRGGFGPDRRFGYDYTGGYEREMGGRPG---YGDERPHGRFA 190
KR R D G E R R G+G +GY + G P YG + +
Sbjct: 76 VKRMRGDTWGDEGRHRFGAHDGYG---MYGYAHD-----HFGMHPTVGPYGHQHATHQRE 127
Query: 191 GRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDILPAEAERRYQE 250
SG Q+ P +M+ KQF+ +D I ++A +Y E
Sbjct: 128 PVVSGDMQTQPC----------------------MMTLKQFLATQDDSISDSDAITKYNE 165
Query: 251 YKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTLD 310
YK E+ Q FF AHKDEEW K KYHP E + ++ + FL L+S +
Sbjct: 166 YKLEFRRQQMNEFFVAHKDEEWFKIKYHPEESQKRKEEQLSFLKRRCEVFLELLKSKEIG 225
Query: 311 LGPSVNASSSNKL 323
SV+AS+++ L
Sbjct: 226 -KVSVDASNTDAL 237
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRA-EGKSSDITNNGAEWEKK 483
+E+LD LI YL +H VD+Y E G+ H R +S ++N E+ +
Sbjct: 718 IEVLDRLILYLRIVHSVDFYNHCEYPYEDEMPNRCGIIHARGPPSQSKVMSNEIQEYIRT 777
Query: 484 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDA-LDPFVRKIRDEKYGWKYGCGAKGCTKLF 542
+ + L ++ K K+ A +A ++ F+ E K+ C G K F
Sbjct: 778 FEGKMASFLTRMVDIDETDMK-KLGAKDAEAEVEKFITANTQELAKDKWLCPLSG--KKF 834
Query: 543 HAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
+FV KH+ KH E V E+ +V YF NY+ D P
Sbjct: 835 KGPDFVRKHIFNKHAEKVEEVRKEVE---YFNNYLKDSKRP 872
>sp|B4QCR6|SRRT_DROSI Serrate RNA effector molecule homolog OS=Drosophila simulans
GN=Ars2 PE=3 SV=1
Length = 947
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 25/192 (13%)
Query: 144 GYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSE 203
G PR GSP P +R D+ G GD R + RF G Q+
Sbjct: 74 GARPRYGSPGRDLPPAKRMRPDW------------GDGDVRANPRFGGYDPYLMQAWNDH 121
Query: 204 WDSSRGGYGDASN------------TGSTQREGLMSYKQFIQELEDDILPAEAERRYQEY 251
+ S Y A + + + + +++ KQF+ +++I +E R+Y EY
Sbjct: 122 YQSMHSAYSHAGHAPPVRESIGGGGSDTLTQPAMLNLKQFLDTQDENISDSEVMRKYTEY 181
Query: 252 KSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTLDL 311
K+++ Q FF AHKDEEW K+KYHP + V E + ++ F+ ++GT+
Sbjct: 182 KTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKRSEEQRGFLQRRTDVFMELFENGTIG- 240
Query: 312 GPSVNASSSNKL 323
V++S ++ L
Sbjct: 241 SVKVDSSQADAL 252
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 484
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 710 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPVRVTNNDVQEYIKMY 769
Query: 485 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 544
+ + Q+ L PL K+ A ++ FV+ E K+ C G K F
Sbjct: 770 ETKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 827
Query: 545 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 863
>sp|Q9V9K7|SRRT_DROME Serrate RNA effector molecule homolog OS=Drosophila melanogaster
GN=Ars2 PE=1 SV=2
Length = 943
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 144 GYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPH----------GRFAGRS 193
G PR GSP P +R D+ G ++ P +G P+ + S
Sbjct: 74 GARPRYGSPVRDLPPAKRMRPDWGDG---DVRANPRFGGYDPYLMQAWNDHYQSMHSAYS 130
Query: 194 SGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDILPAEAERRYQEYKS 253
GG+ P +S GG GD + + +++ KQF+ +++I +E R+Y EYK+
Sbjct: 131 HGGH--APPVRESIGGGGGD-----TLTQPAMLNLKQFLDTQDENISDSEVMRKYTEYKT 183
Query: 254 EYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTLDLGP 313
++ Q FF AHKDEEW K+KYHP + V E + ++ F+ L++GT+
Sbjct: 184 DFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKRSEEQRGFLQRRTDVFMELLENGTIG-SV 242
Query: 314 SVNASSSNKL 323
V++S ++ L
Sbjct: 243 KVDSSQADAL 252
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 484
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 706 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPVRVTNNDVQEYIKIY 765
Query: 485 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 544
+ + Q+ L PL K+ A ++ FV+ E K+ C G K F
Sbjct: 766 ESKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 823
Query: 545 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 824 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 859
>sp|B4II37|SRRT_DROSE Serrate RNA effector molecule homolog OS=Drosophila sechellia
GN=Ars2 PE=3 SV=2
Length = 947
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 24/178 (13%)
Query: 144 GYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSE 203
G PR GSP P +R D+ G GD R + RF G Q+
Sbjct: 74 GARPRYGSPGRDLPPAKRMRPDW------------GDGDVRANPRFGGYDPYLMQAWNDH 121
Query: 204 WDSSRGGYGDASN------------TGSTQREGLMSYKQFIQELEDDILPAEAERRYQEY 251
+ S Y A + + + + +++ KQF+ +++I +E R+Y +Y
Sbjct: 122 YQSMHSAYSHAGHAPPVRESIGGGGSDTLTQPAMLNLKQFLDTQDENISDSEVMRKYTDY 181
Query: 252 KSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTL 309
K+++ Q FF AHKDEEW K+KYHP + V E + ++ F+ L++GT+
Sbjct: 182 KTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKRNEEQRGFLQRRTDVFMELLENGTI 239
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 484
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 710 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPVRVTNNDVQEYIKMY 769
Query: 485 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 544
+ + Q+ L PL K+ A ++ FV+ E K+ C G K F
Sbjct: 770 ETKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 827
Query: 545 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 863
>sp|B4NYV0|SRRT_DROYA Serrate RNA effector molecule homolog OS=Drosophila yakuba GN=Ars2
PE=3 SV=1
Length = 944
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 24/178 (13%)
Query: 144 GYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSE 203
G PR GSP P +R D+ G GD R + RF G Q+
Sbjct: 75 GARPRYGSPGRDLPPAKRMRPDW------------GDGDVRANPRFGGYDPYLMQAWNDH 122
Query: 204 WDSSRGGYGDASN------------TGSTQREGLMSYKQFIQELEDDILPAEAERRYQEY 251
+ S + A + + + + +++ KQF+ +++I +E R+Y EY
Sbjct: 123 YQSMHSAFSHAGHAPPVRESIGGGGSDTLTQPAMLNLKQFLDTQDENISDSEVMRKYTEY 182
Query: 252 KSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTL 309
K+++ Q FF AHKDEEW K+KYHP + V E + ++ F+ L++GT+
Sbjct: 183 KTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVKRSEEQRGFLQRRTDVFVELLENGTI 240
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 484
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 707 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPVRVTNNDVQEYIKTY 766
Query: 485 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 544
+ + Q+ L L KD A ++ FV+ E K+ C G K F
Sbjct: 767 ESKLQQFLTKTVLLSDEEIKDLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 824
Query: 545 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 825 PEFIRKHIFNKHDEKVDEVRKEVQ---YFNNYLRDPKRP 860
>sp|B4KLY7|SRRT_DROMO Serrate RNA effector molecule homolog OS=Drosophila mojavensis
GN=Ars2 PE=3 SV=1
Length = 980
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 21/186 (11%)
Query: 124 RHSPPPRRSPPYKRSRRDDGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDE 183
R+ P R PP KR R D G E R +PR G+ P Y + Y
Sbjct: 82 RYGSPGREMPPAKRMRPDWGDSE-MRSNPRFGYDP-----YLVQAWNDHYQSLHSAY--- 132
Query: 184 RPHGRFAGRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDILPAE 243
S G+ GPS ++ G G S TQ +++ KQF+ +++I +E
Sbjct: 133 ---------SHAGH--GPSVRETGPAGGGGVSGDTQTQ-PAMLTLKQFLDTQDENISDSE 180
Query: 244 AERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLD 303
R+Y EYK+++ Q FF AHKDEEW K+KYHP + V E + ++ + FL
Sbjct: 181 VMRKYTEYKTDFKRQQLNEFFVAHKDEEWFKNKYHPEDSVRRSEEQRGFLKRRTEVFLEL 240
Query: 304 LQSGTL 309
L++GT+
Sbjct: 241 LENGTI 246
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 484
+ +LD L+ YL +H VDYY E G+ H R +N+ E+ K
Sbjct: 744 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPMRVTSNDVQEYIKAY 803
Query: 485 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 544
D + Q+ L L K+ ++ FV+ E K+ C G K F
Sbjct: 804 DGKLQQFLTKTVQLSDEEIKELGAKNPETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 861
Query: 545 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 862 PEFIRKHIFNKHEEKVEEVRKEVQ---YFNNYLRDPKRP 897
>sp|B4J497|SRRT_DROGR Serrate RNA effector molecule homolog OS=Drosophila grimshawi
GN=Ars2 PE=3 SV=1
Length = 1011
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 18/190 (9%)
Query: 143 GGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPS 202
G PR GSP P +R D+ G EM P +G + P+ + YQS S
Sbjct: 84 SGPRPRYGSPGREMPPAKRMRPDWGDG---EMRANPRFGYD-PY--LVQAWNDHYQSLHS 137
Query: 203 EWDSSRGGYGDA---------SNTGSTQREGLMSYKQFIQELEDDILPAEAERRYQEYKS 253
+ S G+ + SN+ + + +++ KQF+ +++I +E R+Y EYK+
Sbjct: 138 AY--SHSGHAPSAREPPPSGISNSDTQTQPAMLTLKQFLDTQDENISDSEVMRKYTEYKT 195
Query: 254 EYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTLDLGP 313
++ Q FF AHKDEEW K+KYHP + V + + ++ FL L +GT+
Sbjct: 196 DFKRQQLNEFFVAHKDEEWFKNKYHPEDSVRRSDEQRGFLKRRTDVFLELLNNGTIS-NV 254
Query: 314 SVNASSSNKL 323
V++S ++ L
Sbjct: 255 KVDSSQADAL 264
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 484
+++LD L+ YL +H VDYY E G+ H R +N+ E+ K
Sbjct: 774 IQVLDRLVLYLRVVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPMRVTSNDVQEYIKSY 833
Query: 485 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 544
+ + Q+ L L K+ ++ FV+ E K+ C G K F
Sbjct: 834 EGKLQQFLAKTVQLSDENIKELGAKNPEKEVEKFVQANTQELAKDKWLCPLSG--KKFKG 891
Query: 545 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 892 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 927
>sp|B4MR46|SRRT_DROWI Serrate RNA effector molecule homolog OS=Drosophila willistoni
GN=Ars2 PE=3 SV=1
Length = 1000
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 143 GGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGR---SSGGYQS 199
GG R GSP P +R D+ + M P +G P+ A S Y
Sbjct: 77 GGPRARYGSPGREMPPAKRMRPDWP---DEGMRSNPRFGGYDPYMMQAWNEHYQSLHYSH 133
Query: 200 GPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQ 259
G +R G + + +++ KQF+ +++I +E R+Y EYK+++ Q
Sbjct: 134 GGGHMPIARETSGPGIGNDTQTQPAMLTLKQFLDTQDENISDSEVMRKYTEYKTDFKRQQ 193
Query: 260 KRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTL 309
FF AHKDEEW K+KYHP + V + + ++ + F+ L++GT+
Sbjct: 194 LNEFFVAHKDEEWFKNKYHPEDSVRRSDEQRGFLQRRSSVFVELLENGTI 243
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 419 IRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSD 472
+ G V+ + + +LD L+ YL +H VDYY E G+ H R
Sbjct: 750 VEGEPIVRDEQLIAVLDRLLLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPMKV 809
Query: 473 ITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDA---LDPFVRKIRDEKYGW 529
+N+ E+ K + + Q+ L ++T D D A DA ++ FV+ E
Sbjct: 810 TSNDIQEYIKSYEGKLQQFLTK---TVLLTDDDIKDLGAKDAETEVEKFVQANTQELAKD 866
Query: 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
K+ C G K F EF+ KH+ KH E V E+ +V+ +F NY+ DP P
Sbjct: 867 KWLCPLSG--KKFKGPEFIRKHIFNKHEEKVDEVRKEVQ---FFNNYLRDPKRP 915
>sp|Q6INH5|SRRTB_XENLA Serrate RNA effector molecule homolog B OS=Xenopus laevis GN=srrt-b
PE=2 SV=1
Length = 844
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 121 RDRRHSPPPRR---SPPYKRSRRD--DGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMG 175
R RR P+R SPP KR RRD D G +P Y GYE
Sbjct: 60 RSRRDRFSPQRHDISPPQKRMRRDWDDHGSDP------------------YHSGYEMPYS 101
Query: 176 GR--PGYGDERPHGRFAGRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQ 233
P YG +P G + P + +R G + G T + ++K+F+
Sbjct: 102 SSAGPAYGPPQPWGH-PEMHVMQHHGIPIQ---ARLGNLHDVDLG-TPAPTMKTFKEFLL 156
Query: 234 ELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHP 279
LED + EA +RY +YK ++ Q + FF AHKDEEW + KYHP
Sbjct: 157 SLEDSVDETEAVKRYNDYKIDFRRQQMQEFFLAHKDEEWFRSKYHP 202
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITN-NGAEWEKK 483
+++LD L+ YL +H VDYY E G+ HVR + +++ EW+K
Sbjct: 586 IKVLDKLLFYLRIVHSVDYYNTCEYPNEDEMPTRCGMMHVRGPLPPNRVSHGEVTEWQKT 645
Query: 484 LD------FRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKG 537
++ F +E L S+D M KD A + FV E K+ C G
Sbjct: 646 IEEKLAPLFAVRETL-SEDEAMKMGKKDPEQEA-----EKFVTANTQELGKEKWLCPLSG 699
Query: 538 CTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 584
K F EFV KH+ KH E + E+ +V +F NY+ D P
Sbjct: 700 --KKFKGPEFVRKHIFNKHAEKIEEVKKEVE---FFNNYLTDSKRPA 741
>sp|Q99MR6|SRRT_MOUSE Serrate RNA effector molecule homolog OS=Mus musculus GN=Srrt PE=1
SV=1
Length = 875
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVA 284
+ S+K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW + KYHP +
Sbjct: 149 MKSFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGK 208
Query: 285 VIERRNDLARKVAKDFLLDLQSGTLD 310
+ + K FL ++SG D
Sbjct: 209 RRQEARGALQNRLKVFLSLMESGWFD 234
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGA-EWEKK 483
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 605 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 664
Query: 484 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 543
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 665 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 722
Query: 544 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 584
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 723 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 760
>sp|Q966L5|SRRT_CAEEL Serrate RNA effector molecule homolog OS=Caenorhabditis elegans
GN=E01A2.2 PE=3 SV=1
Length = 712
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 175 GGRPGYGDERPHGR---FAGRSSGGYQSGPSEWDSSRGGYGDA--SNTGSTQREGLMSYK 229
GG Y ++RP GR + + S G + S SR G G + + S L ++K
Sbjct: 29 GGFNRYDNKRPGGRRDDYQVKRSRGDDADDSFDPVSRSGNGSDLPTESDSIYSGPLQTFK 88
Query: 230 QFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHP 279
+F+ EDDI +A ++Y EYK+E+ Q FF AHKDEEW + KY P
Sbjct: 89 KFLTSQEDDISEEDAIKKYNEYKTEHRKHQLERFFRAHKDEEWFRLKYKP 138
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 33/185 (17%)
Query: 431 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAE---GKSSDITNNGA--- 478
++ LD LI YL +H +D+Y ++ GL HVR + G S +GA
Sbjct: 457 LKALDLLIVYLRIVHSIDFYNHGHYAQEDSMPNRCGLIHVRGQPPSGVSITTDEDGALVV 516
Query: 479 ------EWEKKLDFRWQERL-----RSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKY 527
++ + R ++ L S++ LE M KD ++ F++K E
Sbjct: 517 PQKFVNDFISGFNSRIEKGLIEKQYVSEEELEKMGKKD-----GEKEVEAFIQKNTVELA 571
Query: 528 GWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPGGTP 587
K+ C G K F EF+ KHL+ KH + +L E +F NY+ D P
Sbjct: 572 KDKWLCPLSG--KKFKGPEFIRKHLQSKHED---KLEEARAEADFFNNYLADAQRPVDCE 626
Query: 588 VMQQP 592
Q P
Sbjct: 627 PKQAP 631
>sp|A4IFB1|SRRT_BOVIN Serrate RNA effector molecule homolog OS=Bos taurus GN=SRRT PE=2
SV=1
Length = 876
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVA 284
+ ++K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW + KYHP
Sbjct: 149 MKTFKEFLLSLDDAVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDE--- 205
Query: 285 VIERRNDLARKVAKD----FLLDLQSGTLD 310
+ +R AR ++ FL ++SG D
Sbjct: 206 -VGKRRQEARGALQNRLRVFLSLMESGWFD 234
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGA-EWEKK 483
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 606 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 665
Query: 484 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 543
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 666 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 723
Query: 544 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 584
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 724 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 761
>sp|Q5R539|SRRT_PONAB Serrate RNA effector molecule homolog OS=Pongo abelii GN=SRRT PE=2
SV=1
Length = 871
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVA 284
+ ++K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW + KYHP
Sbjct: 149 MKTFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDE--- 205
Query: 285 VIERRNDLARKVAKD----FLLDLQSGTLD 310
+ +R AR ++ FL +++G D
Sbjct: 206 -VGKRRQEARGALQNRLRVFLSLMETGWFD 234
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGA-EWEKK 483
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 605 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 664
Query: 484 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 543
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 665 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 722
Query: 544 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 584
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 723 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 760
>sp|Q9BXP5|SRRT_HUMAN Serrate RNA effector molecule homolog OS=Homo sapiens GN=SRRT PE=1
SV=1
Length = 876
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVA 284
+ ++K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW + KYHP
Sbjct: 149 MKTFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDE--- 205
Query: 285 VIERRNDLARKVAKD----FLLDLQSGTLD 310
+ +R AR ++ FL +++G D
Sbjct: 206 -VGKRRQEARGALQNRLRVFLSLMETGWFD 234
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGA-EWEKK 483
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 606 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 665
Query: 484 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 543
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 666 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 723
Query: 544 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 584
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 724 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 761
>sp|A8XEG9|SRRT_CAEBR Serrate RNA effector molecule homolog OS=Caenorhabditis briggsae
GN=CBG12064 PE=3 SV=1
Length = 715
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHP 279
L+ +K+F+ EDDI +A ++Y EYK+E+ Q FF AHKDEEW + KY P
Sbjct: 88 LLPFKRFLTNQEDDISEEDAIKKYNEYKNEHRKFQLDRFFRAHKDEEWFRLKYKP 142
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 431 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAE---GKSSDITNNG---- 477
++ LD LI YL +H +D+Y ++ GL HVR + G S + NG
Sbjct: 460 LKALDLLIIYLRIVHSIDFYNHGHYAQEDSMPNRCGLIHVRGQPPSGASINTDENGDLIV 519
Query: 478 ---------AEWEKKLDFRWQER-LRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKY 527
+ + ++D E+ S++ +E M KD ++ F+ E
Sbjct: 520 PQKFINDFISGFNSRIDKGLIEKQYVSEEDMEKMGKKD-----GEKEVEAFIAINTVELA 574
Query: 528 GWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
K+ C G K F EF+ KHL+ KH + + E + E +F NY+ D P
Sbjct: 575 KDKWLCPLSG--KKFKGPEFIRKHLQSKHEDKLEEARA---EADFFNNYLADAQRP 625
>sp|B1H1X4|SRRTA_XENLA Serrate RNA effector molecule homolog A OS=Xenopus laevis GN=srrt-a
PE=2 SV=1
Length = 849
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITN-NGAEWEKK 483
+++LD L+ YL +H VDYY E G+ HVR + +++ AEW+K
Sbjct: 591 IKVLDKLLFYLRIVHSVDYYNTCEYPNEDEMPTRCGMMHVRGPLPPNRVSHGEVAEWQKT 650
Query: 484 LDFRWQERLRSQDPL-EIMTAKDKIDAAAVD---ALDPFVRKIRDEKYGWKYGCGAKGCT 539
++E+L + E ++ ++ I D ++ FV E K+ C G
Sbjct: 651 ----FEEKLAPLFAVRETLSEEESIKMGKKDPEQEVEKFVAANTQELGKEKWLCPLSG-- 704
Query: 540 KLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPGGTPV--MQQPM 593
K F EFV KH+ KH E + E+ +V ++F NY+ D P V +Q P+
Sbjct: 705 KKFKGPEFVRKHIFNKHAEKIEEVKKEV---VFFNNYLIDSKRPALLEVKPLQPPV 757
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 39/171 (22%)
Query: 121 RDRRHSPPPRR---SPPYKRSRRD---------DGGYEPRRGSPRGGFGPDRRFGYDYTG 168
R RR P+R SPP KR RRD GY+ S GG G + +
Sbjct: 60 RSRRERFSPQRHDLSPPQKRMRRDWDDHGSDPYHSGYDLPYSSSAGGPGYGPPQPWGHPE 119
Query: 169 GYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSY 228
+ + G P +R G + G T + ++
Sbjct: 120 MHVLQHHGIPI--------------------------QARLGNLHQVDLG-TPAPIMKTF 152
Query: 229 KQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHP 279
K+F+ LED + EA +RY +YK ++ Q + FF AHKDEEW + KYHP
Sbjct: 153 KEFLLSLEDTVDETEAVKRYNDYKIDFRRQQMQEFFLAHKDEEWFRSKYHP 203
>sp|Q60436|SRRT_CRIGR Serrate RNA effector molecule homolog (Fragment) OS=Cricetulus
griseus GN=SRRT PE=2 SV=3
Length = 306
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 431 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGA-EWEKK 483
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 36 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 95
Query: 484 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 543
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 96 FEEKLTPLLSVRESLSEEEAQKMGRKDTEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 153
Query: 544 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 584
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 154 GPEFVRKHIFNKHAEKIEEVKKEVA---FFNNFLTDAKRPA 191
>sp|Q66I22|SRRT_DANRE Serrate RNA effector molecule homolog OS=Danio rerio GN=srrt PE=2
SV=1
Length = 896
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 24/166 (14%)
Query: 431 VELLDTLITYLWRIHGVDYYGMVET-SEAK-----GLRHVRAEGKSSDIT-NNGAEWEKK 483
V++LD L+ YL +H +DYY E SE + G+ HVR + IT ++W+K
Sbjct: 637 VKVLDRLLFYLRIVHSIDYYNTCEYPSEDEMPNRCGIIHVRGPIPPNRITLREVSDWQKT 696
Query: 484 LD------FRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKG 537
+ F +E L S+D M KD ++ FV E K+ C G
Sbjct: 697 FEEKMGPLFSVKENL-SEDEAAKMGRKD-----PEQEVEKFVVANTQELGKDKWLCPLSG 750
Query: 538 CTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 583
K F EFV KH+ KH + + E+ +V ++F N++ D P
Sbjct: 751 --KKFKGPEFVRKHILNKHGDKIEEVKKEV---VFFNNFLMDAKRP 791
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 270,144,611
Number of Sequences: 539616
Number of extensions: 14245147
Number of successful extensions: 138911
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 1686
Number of HSP's that attempted gapping in prelim test: 70527
Number of HSP's gapped (non-prelim): 43798
length of query: 595
length of database: 191,569,459
effective HSP length: 123
effective length of query: 472
effective length of database: 125,196,691
effective search space: 59092838152
effective search space used: 59092838152
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)