Query 007632
Match_columns 595
No_of_seqs 184 out of 206
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 06:38:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007632.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007632hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ax1_A Serrate RNA effector mo 100.0 4.4E-99 2E-103 786.4 27.7 354 224-581 1-355 (358)
2 2lv2_A Insulinoma-associated p 83.7 0.57 1.9E-05 39.1 2.6 39 515-558 44-82 (85)
3 2adr_A ADR1; transcription reg 83.6 0.26 8.8E-06 36.4 0.4 40 515-559 18-57 (60)
4 1x5w_A Zinc finger protein 64, 81.8 0.55 1.9E-05 35.8 1.7 40 515-559 25-64 (70)
5 2d9h_A Zinc finger protein 692 81.8 0.95 3.2E-05 35.1 3.1 29 529-559 37-65 (78)
6 1bbo_A Human enhancer-binding 81.1 0.88 3E-05 32.9 2.5 39 515-558 17-55 (57)
7 1znf_A 31ST zinc finger from X 80.9 1 3.6E-05 27.3 2.5 24 531-556 2-25 (27)
8 1klr_A Zinc finger Y-chromosom 80.8 0.82 2.8E-05 28.1 2.0 26 531-558 3-28 (30)
9 1paa_A Yeast transcription fac 80.5 1 3.5E-05 27.9 2.4 26 530-557 2-27 (30)
10 2gqj_A Zinc finger protein KIA 79.3 0.88 3E-05 37.5 2.2 28 530-559 54-81 (98)
11 2yt9_A Zinc finger-containing 79.1 1.8 6E-05 34.5 3.9 41 515-558 51-91 (95)
12 1sp2_A SP1F2; zinc finger, tra 79.1 1 3.4E-05 28.6 2.0 28 530-557 2-29 (31)
13 3mjh_B Early endosome antigen 79.0 0.79 2.7E-05 33.0 1.6 27 530-558 5-31 (34)
14 1zfd_A SWI5; DNA binding motif 78.8 1.1 3.9E-05 28.4 2.2 27 530-556 3-29 (32)
15 2elx_A Zinc finger protein 406 77.5 0.99 3.4E-05 29.2 1.7 27 530-558 7-33 (35)
16 1bhi_A CRE-BP1, ATF-2; CRE bin 76.8 1 3.5E-05 30.0 1.6 25 530-554 6-30 (38)
17 1va1_A Transcription factor SP 76.3 0.97 3.3E-05 30.3 1.3 25 530-554 8-32 (37)
18 1ard_A Yeast transcription fac 76.1 1.3 4.3E-05 27.2 1.8 26 530-557 2-27 (29)
19 3uk3_C Zinc finger protein 217 76.1 2.3 7.9E-05 30.6 3.5 38 515-557 20-57 (57)
20 3iuf_A Zinc finger protein UBI 74.6 1.4 4.7E-05 31.7 1.9 27 530-558 7-33 (48)
21 2elo_A Zinc finger protein 406 74.5 1.1 3.7E-05 29.6 1.2 27 530-558 9-35 (37)
22 1p7a_A BF3, BKLF, kruppel-like 74.4 1.8 6.1E-05 28.4 2.3 25 530-556 11-35 (37)
23 1x6e_A Zinc finger protein 24; 73.4 2 7E-05 32.8 2.7 38 515-557 30-67 (72)
24 2m0d_A Zinc finger and BTB dom 73.3 1.3 4.3E-05 27.2 1.3 26 530-557 3-28 (30)
25 2ct1_A Transcriptional repress 72.5 1.5 5.3E-05 33.9 1.8 27 530-558 45-71 (77)
26 2elr_A Zinc finger protein 406 72.0 1.8 6.1E-05 28.2 1.8 26 530-557 9-34 (36)
27 1rik_A E6APC1 peptide; E6-bind 72.0 1.4 4.8E-05 27.0 1.2 25 530-556 2-26 (29)
28 2dlq_A GLI-kruppel family memb 72.0 2.5 8.5E-05 35.0 3.1 39 515-558 82-120 (124)
29 2lce_A B-cell lymphoma 6 prote 71.5 2 6.8E-05 33.0 2.2 39 515-558 33-71 (74)
30 2m0e_A Zinc finger and BTB dom 70.7 1.5 5.1E-05 26.6 1.1 26 530-557 2-27 (29)
31 2drp_A Protein (tramtrack DNA- 70.4 1.8 6.2E-05 32.3 1.7 27 529-557 39-65 (66)
32 2elm_A Zinc finger protein 406 70.4 1.1 3.7E-05 30.0 0.5 27 530-558 9-35 (37)
33 2elv_A Zinc finger protein 406 69.5 2 6.8E-05 28.1 1.6 23 530-554 9-31 (36)
34 2dlk_A Novel protein; ZF-C2H2 69.3 3 0.0001 32.0 2.9 39 515-556 25-64 (79)
35 2lvt_A Zinc finger and BTB dom 72.2 0.98 3.3E-05 28.0 0.0 25 531-557 3-27 (29)
36 1rim_A E6APC2 peptide; E6-bind 69.0 2.6 8.7E-05 27.5 2.1 25 530-556 2-26 (33)
37 2eln_A Zinc finger protein 406 69.0 2.3 8E-05 30.2 2.0 25 530-554 9-33 (38)
38 2kvg_A Zinc finger and BTB dom 68.9 2 6.8E-05 26.5 1.4 23 530-554 3-25 (27)
39 1srk_A Zinc finger protein ZFP 68.7 2.1 7E-05 27.8 1.5 26 530-557 7-32 (35)
40 2kvh_A Zinc finger and BTB dom 68.2 2.5 8.6E-05 25.7 1.8 23 530-554 3-25 (27)
41 2ab3_A ZNF29; zinc finger prot 68.2 2.6 8.8E-05 25.7 1.9 24 531-554 3-26 (29)
42 2els_A Zinc finger protein 406 68.0 1.9 6.4E-05 28.2 1.2 25 530-556 9-33 (36)
43 2m0f_A Zinc finger and BTB dom 67.8 1.7 5.8E-05 26.4 0.9 24 530-555 2-25 (29)
44 2lvr_A Zinc finger and BTB dom 70.9 1.1 3.7E-05 27.7 0.0 27 530-558 3-29 (30)
45 1ncs_A Peptide M30F, transcrip 67.3 1.8 6.1E-05 30.8 1.1 27 530-556 18-44 (47)
46 1zw8_A Zinc-responsive transcr 67.2 3.3 0.00011 32.6 2.7 27 531-557 2-28 (64)
47 2dmd_A Zinc finger protein 64, 66.8 3.2 0.00011 33.0 2.6 39 515-558 52-90 (96)
48 2ep1_A Zinc finger protein 484 66.5 3 0.0001 28.8 2.1 26 530-557 12-37 (46)
49 2elt_A Zinc finger protein 406 66.0 2.2 7.5E-05 27.7 1.2 25 530-556 9-33 (36)
50 2en7_A Zinc finger protein 268 66.0 2.7 9.3E-05 28.6 1.8 24 530-555 12-35 (44)
51 2elq_A Zinc finger protein 406 65.8 2.5 8.7E-05 27.6 1.6 25 530-556 9-33 (36)
52 2eom_A ZFP-95, zinc finger pro 65.7 2.8 9.5E-05 29.2 1.8 26 530-557 12-37 (46)
53 2djr_A Zinc finger BED domain- 65.4 3.4 0.00012 34.6 2.5 33 529-563 27-66 (76)
54 2cot_A Zinc finger protein 435 65.1 2.6 8.9E-05 32.6 1.7 39 515-558 34-72 (77)
55 2gli_A Protein (five-finger GL 65.1 3.3 0.00011 35.8 2.6 40 515-557 115-155 (155)
56 2emi_A Zinc finger protein 484 65.0 2.6 8.9E-05 29.2 1.6 27 530-558 12-38 (46)
57 2eq2_A Zinc finger protein 347 65.0 3.1 0.00011 28.8 2.0 25 530-556 12-36 (46)
58 2dlk_A Novel protein; ZF-C2H2 65.0 3.1 0.00011 31.9 2.2 28 530-557 7-34 (79)
59 2csh_A Zinc finger protein 297 64.8 4.4 0.00015 33.2 3.2 42 515-561 53-94 (110)
60 2epx_A Zinc finger protein 28 64.7 4 0.00014 28.2 2.5 26 530-557 12-37 (47)
61 2epa_A Krueppel-like factor 10 64.6 4.4 0.00015 30.7 2.9 36 515-553 35-70 (72)
62 1a1h_A QGSR zinc finger peptid 64.5 5.3 0.00018 31.2 3.5 39 515-558 50-88 (90)
63 2ept_A Zinc finger protein 32; 64.3 2.5 8.7E-05 28.5 1.3 26 530-557 10-35 (41)
64 2emg_A Zinc finger protein 484 64.2 3 0.0001 28.8 1.8 25 530-556 12-36 (46)
65 1ubd_C Protein (YY1 zinc finge 64.1 4.8 0.00016 33.5 3.3 42 515-559 80-121 (124)
66 2eq1_A Zinc finger protein 347 64.0 3 0.0001 28.9 1.7 25 530-556 12-36 (46)
67 2kvf_A Zinc finger and BTB dom 63.6 3.3 0.00011 25.2 1.7 23 530-554 3-25 (28)
68 2epa_A Krueppel-like factor 10 63.4 2.8 9.5E-05 31.9 1.6 30 529-558 16-45 (72)
69 2enh_A Zinc finger protein 28 63.3 3.2 0.00011 28.8 1.8 25 530-556 12-36 (46)
70 2ct5_A Zinc finger BED domain 63.2 4.5 0.00015 33.5 2.8 35 529-565 28-65 (73)
71 2yth_A Zinc finger protein 224 63.0 3.9 0.00013 28.3 2.2 25 530-556 12-36 (46)
72 2yrm_A B-cell lymphoma 6 prote 63.0 3.9 0.00013 28.1 2.2 27 530-558 10-36 (43)
73 2epu_A Zinc finger protein 32; 62.9 2.3 8E-05 29.4 1.0 26 530-557 12-37 (45)
74 2en9_A Zinc finger protein 28 62.7 3.4 0.00012 28.7 1.8 25 530-556 12-36 (46)
75 2ctd_A Zinc finger protein 512 62.7 4.5 0.00015 33.6 2.8 38 515-558 51-88 (96)
76 2enf_A Zinc finger protein 347 62.5 3.7 0.00013 28.4 2.0 25 530-556 12-36 (46)
77 2eoh_A Zinc finger protein 28 62.5 3.3 0.00011 28.7 1.7 25 530-556 12-36 (46)
78 2eoz_A Zinc finger protein 473 62.5 2.4 8.3E-05 29.5 1.0 26 530-557 12-37 (46)
79 2ytr_A Zinc finger protein 347 62.1 3.7 0.00013 28.3 1.9 25 530-556 12-36 (46)
80 2eop_A Zinc finger protein 268 62.0 3.8 0.00013 28.2 1.9 24 530-555 12-35 (46)
81 2eos_A B-cell lymphoma 6 prote 61.9 3.4 0.00012 28.0 1.7 26 530-557 11-36 (42)
82 2ytp_A Zinc finger protein 484 61.8 2.9 9.8E-05 29.1 1.3 25 530-556 12-36 (46)
83 2epz_A Zinc finger protein 28 61.8 3.8 0.00013 28.3 1.9 26 530-557 12-37 (46)
84 2el5_A Zinc finger protein 268 61.6 3.3 0.00011 28.0 1.5 26 530-557 10-35 (42)
85 2ytt_A Zinc finger protein 473 61.5 3.3 0.00011 28.8 1.5 24 530-555 12-35 (46)
86 2ep3_A Zinc finger protein 484 61.4 3.2 0.00011 28.8 1.4 25 530-556 12-36 (46)
87 2emk_A Zinc finger protein 28 61.2 3.8 0.00013 28.4 1.8 25 530-556 12-36 (46)
88 2epv_A Zinc finger protein 268 61.1 3.5 0.00012 28.4 1.6 26 530-557 12-37 (44)
89 2eq4_A Zinc finger protein 224 61.1 3.7 0.00013 28.3 1.8 25 530-556 12-36 (46)
90 2ct1_A Transcriptional repress 61.1 3.2 0.00011 32.0 1.6 27 530-558 15-41 (77)
91 2yte_A Zinc finger protein 473 61.0 3.9 0.00013 27.5 1.8 24 530-555 10-33 (42)
92 2ytf_A Zinc finger protein 268 61.0 3.1 0.0001 28.7 1.3 26 530-557 12-37 (46)
93 2em6_A Zinc finger protein 224 60.9 3.9 0.00013 28.3 1.9 25 530-556 12-36 (46)
94 2eon_A ZFP-95, zinc finger pro 60.8 3.6 0.00012 28.6 1.7 24 530-555 12-35 (46)
95 2yrj_A Zinc finger protein 473 60.8 3.1 0.00011 28.7 1.3 25 530-556 12-36 (46)
96 2ytb_A Zinc finger protein 32; 60.7 3.2 0.00011 28.0 1.3 25 530-556 11-35 (42)
97 1njq_A Superman protein; zinc- 60.5 3.2 0.00011 27.8 1.3 26 530-557 6-31 (39)
98 2eov_A Zinc finger protein 484 60.2 4 0.00014 28.1 1.8 25 530-556 12-36 (46)
99 1llm_C Chimera of ZIF23-GCN4; 60.0 8.7 0.0003 30.3 4.0 39 515-558 19-57 (88)
100 2em4_A Zinc finger protein 28 59.9 3.4 0.00011 28.7 1.4 26 530-557 12-37 (46)
101 2em3_A Zinc finger protein 28 59.9 3.2 0.00011 28.7 1.3 25 530-556 12-36 (46)
102 2eq3_A Zinc finger protein 347 59.9 3 0.0001 28.8 1.1 25 530-556 12-36 (46)
103 2em0_A Zinc finger protein 224 59.8 4.7 0.00016 27.9 2.1 25 530-556 12-36 (46)
104 2ytn_A Zinc finger protein 347 59.8 4.4 0.00015 28.0 2.0 25 530-556 12-36 (46)
105 2yti_A Zinc finger protein 347 59.7 4.1 0.00014 28.2 1.8 25 530-556 12-36 (46)
106 2eou_A Zinc finger protein 473 59.7 4.3 0.00015 27.8 1.9 25 530-556 12-36 (44)
107 2ytq_A Zinc finger protein 268 59.6 4.1 0.00014 28.2 1.8 25 530-556 12-36 (46)
108 2emf_A Zinc finger protein 484 59.5 3.6 0.00012 28.5 1.5 26 530-557 12-37 (46)
109 2eml_A Zinc finger protein 28 59.3 3.8 0.00013 28.3 1.6 26 530-557 12-37 (46)
110 2epc_A Zinc finger protein 32; 59.3 3.4 0.00012 27.8 1.3 25 530-556 11-35 (42)
111 2eof_A Zinc finger protein 268 58.8 3.8 0.00013 27.9 1.4 25 530-556 12-36 (44)
112 2emj_A Zinc finger protein 28 58.7 3.7 0.00013 28.5 1.4 24 530-555 12-35 (46)
113 2elz_A Zinc finger protein 224 58.6 4.7 0.00016 27.9 1.9 25 530-556 12-36 (46)
114 2yts_A Zinc finger protein 484 58.5 3.9 0.00013 28.2 1.5 24 530-555 12-35 (46)
115 2eow_A Zinc finger protein 347 58.4 3.6 0.00012 28.4 1.3 25 530-556 12-36 (46)
116 2elp_A Zinc finger protein 406 58.4 3 0.0001 27.4 0.9 23 530-554 9-32 (37)
117 2emm_A ZFP-95, zinc finger pro 58.3 3.6 0.00012 28.4 1.3 25 530-556 12-36 (46)
118 2em7_A Zinc finger protein 224 58.3 4.2 0.00014 28.1 1.6 26 530-557 12-37 (46)
119 2em5_A ZFP-95, zinc finger pro 58.2 3.6 0.00012 28.5 1.3 24 530-555 12-35 (46)
120 2ebt_A Krueppel-like factor 5; 58.2 8.5 0.00029 30.6 3.7 34 516-554 64-97 (100)
121 2el4_A Zinc finger protein 268 58.2 3.8 0.00013 28.2 1.4 25 530-556 12-36 (46)
122 2emy_A Zinc finger protein 268 57.7 4 0.00014 28.2 1.4 25 530-556 12-36 (46)
123 2yto_A Zinc finger protein 484 57.6 3.7 0.00013 28.5 1.2 24 530-555 12-35 (46)
124 2eps_A POZ-, at HOOK-, and zin 57.5 5 0.00017 29.1 2.0 26 530-557 12-37 (54)
125 2ene_A Zinc finger protein 347 57.4 3.8 0.00013 28.4 1.3 25 530-556 12-36 (46)
126 4gzn_C ZFP-57, zinc finger pro 57.4 7.6 0.00026 30.0 3.1 37 515-557 20-56 (60)
127 2gqj_A Zinc finger protein KIA 57.3 6.3 0.00021 32.2 2.8 36 517-557 14-50 (98)
128 2ep0_A Zinc finger protein 28 57.3 3.9 0.00013 28.3 1.3 25 530-556 12-36 (46)
129 2eor_A Zinc finger protein 224 57.0 3.2 0.00011 28.6 0.8 23 530-554 12-34 (46)
130 2eq0_A Zinc finger protein 347 56.8 3.9 0.00013 28.3 1.2 25 530-556 12-36 (46)
131 1yui_A GAGA-factor; complex (D 56.8 4.5 0.00015 29.3 1.6 27 530-558 24-50 (54)
132 2emx_A Zinc finger protein 268 56.7 4 0.00014 27.9 1.3 25 530-556 10-34 (44)
133 2ytj_A Zinc finger protein 484 56.7 4 0.00014 28.2 1.3 24 530-555 12-35 (46)
134 2ema_A Zinc finger protein 347 56.7 4 0.00014 28.2 1.3 25 530-556 12-36 (46)
135 2eoj_A Zinc finger protein 268 56.6 3.8 0.00013 28.0 1.2 25 530-556 12-36 (44)
136 2el6_A Zinc finger protein 268 56.4 4.6 0.00016 28.0 1.6 26 530-557 12-37 (46)
137 2em9_A Zinc finger protein 224 56.2 4.5 0.00016 27.8 1.5 25 530-556 12-36 (46)
138 2wbt_A B-129; zinc finger; 2.7 56.2 3.6 0.00012 34.8 1.2 29 530-560 100-128 (129)
139 2rpc_A Zinc finger protein ZIC 56.2 4.7 0.00016 35.0 1.9 41 515-558 108-148 (155)
140 2eoq_A Zinc finger protein 224 56.2 5 0.00017 27.7 1.7 24 530-555 12-35 (46)
141 1f2i_G Fusion of N-terminal 17 56.1 8.9 0.0003 29.0 3.3 23 530-554 49-71 (73)
142 2kmk_A Zinc finger protein GFI 56.1 9.8 0.00033 29.0 3.6 36 515-555 45-80 (82)
143 2ytk_A Zinc finger protein 347 55.9 4.3 0.00015 28.0 1.4 25 530-556 12-36 (46)
144 2eme_A Zinc finger protein 473 55.8 4.7 0.00016 27.8 1.5 25 530-556 12-36 (46)
145 2lvu_A Zinc finger and BTB dom 60.7 2.4 8.3E-05 25.5 0.0 22 531-554 3-24 (26)
146 2en3_A ZFP-95, zinc finger pro 55.7 3.7 0.00013 28.4 1.0 23 530-554 12-34 (46)
147 2emp_A Zinc finger protein 347 55.6 3.5 0.00012 28.5 0.8 23 530-554 12-34 (46)
148 2en6_A Zinc finger protein 268 55.6 3.7 0.00013 28.4 1.0 25 530-556 12-36 (46)
149 2ytm_A Zinc finger protein 28 55.5 4.3 0.00015 28.2 1.3 23 530-554 12-34 (46)
150 2emh_A Zinc finger protein 484 55.5 3.5 0.00012 28.5 0.8 23 530-554 12-34 (46)
151 2ee8_A Protein ODD-skipped-rel 55.4 6.9 0.00024 31.7 2.7 27 530-558 73-99 (106)
152 1x3c_A Zinc finger protein 292 55.4 7 0.00024 32.6 2.7 28 530-557 27-54 (73)
153 3uk3_C Zinc finger protein 217 55.4 4.3 0.00015 29.1 1.3 25 530-556 4-28 (57)
154 2emb_A Zinc finger protein 473 55.3 4.7 0.00016 27.5 1.5 25 530-556 12-36 (44)
155 1f2i_G Fusion of N-terminal 17 55.3 3.7 0.00013 31.1 1.0 27 530-556 19-45 (73)
156 1bbo_A Human enhancer-binding 54.9 5.6 0.00019 28.5 1.9 25 531-557 2-26 (57)
157 2epq_A POZ-, at HOOK-, and zin 54.8 4.2 0.00015 28.0 1.2 26 530-557 10-35 (45)
158 2eoe_A Zinc finger protein 347 54.8 4.8 0.00016 27.7 1.4 25 530-556 12-36 (46)
159 2emz_A ZFP-95, zinc finger pro 54.8 5.9 0.0002 27.4 1.9 23 530-554 12-34 (46)
160 2eox_A Zinc finger protein 473 54.6 2.8 9.6E-05 28.7 0.2 26 530-557 12-37 (44)
161 2ely_A Zinc finger protein 224 54.5 5.4 0.00018 27.6 1.7 25 530-556 12-36 (46)
162 2yu5_A Zinc finger protein 473 54.5 4.2 0.00014 27.8 1.1 26 530-557 12-37 (44)
163 2ebt_A Krueppel-like factor 5; 54.5 7.8 0.00027 30.8 2.9 41 515-558 33-73 (100)
164 2dmi_A Teashirt homolog 3; zin 54.4 6.4 0.00022 32.5 2.4 27 530-558 80-106 (115)
165 2j7j_A Transcription factor II 54.1 9.5 0.00032 29.2 3.2 25 530-554 31-55 (85)
166 2ep2_A Zinc finger protein 484 53.9 4.8 0.00017 27.8 1.3 26 530-557 12-37 (46)
167 2ee8_A Protein ODD-skipped-rel 53.9 9.2 0.00031 30.9 3.2 39 515-558 33-71 (106)
168 1wjp_A Zinc finger protein 295 53.8 7.2 0.00024 31.9 2.6 27 530-558 69-95 (107)
169 2kmk_A Zinc finger protein GFI 53.8 7.6 0.00026 29.6 2.6 39 515-558 17-55 (82)
170 2drp_A Protein (tramtrack DNA- 53.8 6 0.00021 29.3 1.9 25 530-556 10-34 (66)
171 2em2_A Zinc finger protein 28 53.8 4.7 0.00016 27.9 1.3 25 530-556 12-36 (46)
172 2dmd_A Zinc finger protein 64, 53.6 6.1 0.00021 31.3 2.1 39 515-558 24-62 (96)
173 1x6h_A Transcriptional repress 53.5 4.8 0.00017 31.1 1.4 27 530-558 47-73 (86)
174 2ent_A Krueppel-like factor 15 53.5 4.9 0.00017 27.8 1.3 26 530-555 12-37 (48)
175 2eoo_A ZFP-95, zinc finger pro 53.1 4.7 0.00016 27.9 1.2 23 530-554 12-34 (46)
176 2csh_A Zinc finger protein 297 53.1 7.4 0.00025 31.8 2.6 39 515-558 25-63 (110)
177 2eoy_A Zinc finger protein 473 53.0 5 0.00017 27.8 1.3 24 530-555 12-35 (46)
178 2wbs_A Krueppel-like factor 4; 52.9 5.6 0.00019 31.0 1.7 23 531-553 36-58 (89)
179 2ytg_A ZFP-95, zinc finger pro 52.8 4.1 0.00014 28.2 0.8 26 530-557 12-37 (46)
180 2adr_A ADR1; transcription reg 52.7 6.3 0.00022 28.6 1.9 26 530-557 2-27 (60)
181 2yt9_A Zinc finger-containing 52.6 7.7 0.00026 30.6 2.5 39 515-558 23-61 (95)
182 2en8_A Zinc finger protein 224 52.4 5.1 0.00017 27.6 1.3 25 530-556 12-36 (46)
183 2en1_A Zinc finger protein 224 51.8 5.1 0.00017 27.6 1.2 25 530-556 12-36 (46)
184 2lt7_A Transcriptional regulat 51.6 8.1 0.00028 34.1 2.7 40 515-559 66-105 (133)
185 2ysp_A Zinc finger protein 224 51.6 4.5 0.00015 27.9 0.9 25 530-556 12-36 (46)
186 2yso_A ZFP-95, zinc finger pro 51.3 5.5 0.00019 27.5 1.3 25 530-556 12-36 (46)
187 2wbs_A Krueppel-like factor 4; 51.0 12 0.00043 28.9 3.5 35 515-554 53-87 (89)
188 2j7j_A Transcription factor II 49.9 7.8 0.00027 29.7 2.1 26 531-556 59-85 (85)
189 1zr9_A Zinc finger protein 593 49.7 7.2 0.00025 35.4 2.1 34 530-565 50-84 (124)
190 2ytd_A Zinc finger protein 473 49.4 6 0.00021 27.3 1.2 24 530-555 12-35 (46)
191 2lce_A B-cell lymphoma 6 prote 49.3 7.2 0.00025 29.7 1.8 28 529-558 16-43 (74)
192 2epr_A POZ-, at HOOK-, and zin 49.0 5.6 0.00019 28.0 1.0 26 530-557 12-37 (48)
193 1a1h_A QGSR zinc finger peptid 48.9 8.9 0.00031 29.8 2.3 38 515-557 22-59 (90)
194 2jp9_A Wilms tumor 1; DNA bind 48.5 11 0.00037 30.9 2.9 37 515-556 54-90 (119)
195 2enc_A Zinc finger protein 224 48.4 6.4 0.00022 27.1 1.2 23 530-554 12-34 (46)
196 2epw_A Zinc finger protein 268 48.4 6.1 0.00021 27.2 1.1 23 530-554 12-34 (46)
197 2en2_A B-cell lymphoma 6 prote 48.3 5 0.00017 27.0 0.7 23 530-554 11-33 (42)
198 2em8_A Zinc finger protein 224 48.1 5.3 0.00018 27.6 0.8 23 530-554 12-34 (46)
199 1zw8_A Zinc-responsive transcr 48.1 16 0.00054 28.7 3.6 28 529-556 37-64 (64)
200 2jp9_A Wilms tumor 1; DNA bind 47.5 15 0.00052 29.9 3.7 37 515-554 82-118 (119)
201 1x5w_A Zinc finger protein 64, 47.5 7.3 0.00025 29.4 1.5 27 530-558 9-35 (70)
202 1x6h_A Transcriptional repress 46.5 7.6 0.00026 30.0 1.5 27 530-558 15-41 (86)
203 1x6e_A Zinc finger protein 24; 46.2 7.2 0.00025 29.7 1.3 26 530-557 14-39 (72)
204 2lv2_A Insulinoma-associated p 46.1 7.1 0.00024 32.3 1.4 27 530-558 28-54 (85)
205 2epp_A POZ-, at HOOK-, and zin 44.0 12 0.00041 29.8 2.3 27 530-558 13-39 (66)
206 1ubd_C Protein (YY1 zinc finge 43.9 11 0.00039 31.1 2.4 40 515-557 50-89 (124)
207 2rpc_A Zinc finger protein ZIC 43.9 14 0.00047 32.0 2.9 40 516-558 79-118 (155)
208 2yu8_A Zinc finger protein 347 43.5 6.3 0.00022 27.1 0.6 23 530-554 12-34 (46)
209 2ej4_A Zinc finger protein ZIC 42.5 13 0.00046 29.3 2.5 27 530-558 25-51 (95)
210 2kfq_A FP1; protein, de novo p 42.1 2.5 8.4E-05 27.3 -1.7 22 531-554 3-24 (32)
211 3foz_A TRNA delta(2)-isopenten 41.8 23 0.0008 36.6 4.7 49 224-273 247-295 (316)
212 2i13_A AART; DNA binding, zinc 39.6 18 0.00061 32.5 3.1 39 515-558 149-187 (190)
213 2gli_A Protein (five-finger GL 39.4 22 0.00076 30.5 3.6 41 514-557 84-124 (155)
214 2jsp_A Transcriptional regulat 38.6 14 0.00047 31.8 2.0 33 529-566 20-52 (87)
215 2cot_A Zinc finger protein 435 38.6 13 0.00046 28.4 1.8 27 529-557 17-43 (77)
216 2ghf_A ZHX1, zinc fingers and 38.6 16 0.00055 31.1 2.5 26 530-557 50-75 (102)
217 2d9h_A Zinc finger protein 692 38.0 13 0.00043 28.5 1.6 26 530-557 7-32 (78)
218 2elu_A Zinc finger protein 406 37.4 16 0.00055 26.3 1.9 25 530-556 9-33 (37)
219 2dlq_A GLI-kruppel family memb 37.3 27 0.00093 28.5 3.6 28 529-558 65-92 (124)
220 4i1l_A Scurfin, forkhead box p 36.8 12 0.0004 32.6 1.3 26 532-557 14-39 (93)
221 2ej4_A Zinc finger protein ZIC 35.5 22 0.00076 27.9 2.7 22 531-554 63-84 (95)
222 2ctd_A Zinc finger protein 512 35.4 25 0.00086 29.0 3.1 24 530-555 34-58 (96)
223 2yrk_A Zinc finger homeobox pr 31.5 22 0.00076 28.2 1.9 30 530-561 13-43 (55)
224 1llm_C Chimera of ZIF23-GCN4; 30.4 14 0.00049 29.0 0.8 25 530-556 3-27 (88)
225 1tf6_A Protein (transcription 30.1 31 0.001 30.9 3.0 29 530-558 104-132 (190)
226 3iax_B Colicin-A; TOLB, TOLB B 29.7 51 0.0017 29.0 4.1 20 175-194 10-29 (115)
227 3exa_A TRNA delta(2)-isopenten 29.5 1.1E+02 0.0039 31.6 7.5 50 224-274 239-288 (322)
228 1fv5_A First zinc finger of U- 28.4 24 0.00083 24.7 1.6 21 530-552 8-28 (36)
229 4gzn_C ZFP-57, zinc finger pro 27.7 26 0.00088 27.0 1.8 23 530-554 4-26 (60)
230 2eod_A TNF receptor-associated 27.2 20 0.00068 26.8 1.1 22 530-554 10-31 (66)
231 1tf6_A Protein (transcription 26.7 50 0.0017 29.5 3.8 40 515-557 60-99 (190)
232 2kw6_A Cyclin-dependent kinase 26.2 26 0.0009 28.6 1.6 19 366-384 36-54 (65)
233 2i13_A AART; DNA binding, zinc 25.6 32 0.0011 30.7 2.3 38 515-557 121-158 (190)
234 1x6f_A Zinc finger protein 462 24.0 33 0.0011 28.2 1.9 23 530-554 25-47 (88)
235 2lt7_A Transcriptional regulat 23.8 46 0.0016 29.2 2.9 35 515-554 38-72 (133)
236 3crm_A TRNA delta(2)-isopenten 23.4 1.4E+02 0.0048 30.7 6.8 50 224-274 253-302 (323)
237 2eod_A TNF receptor-associated 23.4 42 0.0014 24.9 2.2 34 515-554 25-59 (66)
238 2wbt_A B-129; zinc finger; 2.7 22.7 36 0.0012 28.5 1.9 23 530-554 74-96 (129)
239 2dmi_A Teashirt homolog 3; zin 22.1 38 0.0013 27.6 1.9 23 530-554 19-41 (115)
240 3cw1_L U1 small nuclear ribonu 21.7 76 0.0026 26.6 3.6 35 530-566 3-40 (77)
241 2ghf_A ZHX1, zinc fingers and 20.9 33 0.0011 29.2 1.3 25 530-556 18-42 (102)
242 1wjp_A Zinc finger protein 295 20.9 49 0.0017 26.7 2.3 23 530-554 16-38 (107)
243 2m1l_A Cyclin-dependent kinase 20.7 39 0.0013 27.9 1.6 19 366-384 40-58 (69)
No 1
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding; 2.74A {Arabidopsis thaliana}
Probab=100.00 E-value=4.4e-99 Score=786.37 Aligned_cols=354 Identities=77% Similarity=1.199 Sum_probs=286.0
Q ss_pred CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHhhccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 007632 224 GLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLD 303 (595)
Q Consensus 224 ~lmsFKqFl~~~~D~Itp~eA~~rY~eYK~ef~~~q~~~FF~~HK~eeWFrEKY~P~~l~~~~erR~e~~~~~ak~F~~d 303 (595)
+||||||||++|+|+|||+||+++|++||.+|.++|++.||++||+++||++||||+.+.+++++|++++++.|+.|+++
T Consensus 1 glmsFKqFl~~~~D~isp~eA~~~Y~eYk~e~~~~q~~~FF~~HK~e~WfreKY~P~~l~~~~~~R~e~ak~~a~~F~~~ 80 (358)
T 3ax1_A 1 GLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAFFNTHKEEDWLKNKYHPTNLLSVIERRNDLAQKVAKDFLLD 80 (358)
T ss_dssp CCCCHHHHGGGTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCChhhHHHhHHHHHHHHH
Q 007632 304 LQSGTLDLGPSVNASSSNKLGQTSEPNSDDDVDNGGKRRRHGRGPAKETDLLSAAPKAHPISSEPRRIQVDIEQAQALVR 383 (595)
Q Consensus 304 LesG~fD~~pgv~~~~~~ksG~~sdpn~ede~~~~~Kr~R~Gw~~~k~~D~~s~aPka~pi~S~p~RI~~DLeqA~~Lv~ 383 (595)
|++|+||+++++++. +++|.++++++++.++.++|++++||++.+++|++++||++||+||+|+||++||+||++||+
T Consensus 81 L~~G~ld~~~~~~~~--~~~~~~~~~~~~d~~~~~~k~~~~g~~~~~~~d~~~~ap~~~P~~S~p~RI~~Dle~a~~Lv~ 158 (358)
T 3ax1_A 81 LQSGTLDLGPAVTAL--NKSGRTSEPNSEDEAAGVGKRKRHGMGGAKENELLSAAPKAPSFTSDPKRILTDVEQTQALVR 158 (358)
T ss_dssp HHTTCCCCCSBSSCC--C-----------------------------------CCCBCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCccccc--cccCCCCCCChhhhhhccccccccCCCcccccchhhcccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999998877774 577878899998888888899999999999999999999999999999999999999999999
Q ss_pred HHhhhhcccccccCCCccccccccccCC-CCCCceeecccccccCcchhhHHHHHHHHHHHHhhcccccccccccccccc
Q 007632 384 KLDSEKGITENILCGSDNDKMNREKSHG-STGPVIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMVETSEAKGLR 462 (595)
Q Consensus 384 kLDaEkGIe~n~L~~~d~~~~d~~~s~~-s~gp~~i~rg~~~v~g~e~~~~LDllI~YLRrVHs~dYY~~~E~~er~g~~ 462 (595)
+||+|+||++|+|...++...++++++. ++||++|++|+.++++++++++||++|+|||+||||||||++||+++||++
T Consensus 159 kLD~e~gie~n~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~LD~~i~YLRrVH~~dYY~~~E~~~~~g~~ 238 (358)
T 3ax1_A 159 KLDSEKKIEENVLQGSETEKSGREKLHSGSTGPVVIIRGLTSVKGLEGVELLDTLVTYLWRVHGLDYYGKVETNEAKGLR 238 (358)
T ss_dssp HHHHHHTCCCCTTC---------------CCCCCEEECCSSCCEEECSHHHHHHHHHHHHHHHCEEGGGTEECTTCCSBC
T ss_pred HHHHhhCCcccccccccccccccccccccCCCcchhhccccchhhhhhHHHHHHHHHHHHHHHcccccceEeecCccccC
Confidence 9999999999999998777777777775 789999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcCCchhhHHHHhHHHHHHHhhccChHHHhhhhchhHHHHHHhhhhHHHhhhhcccCCccccCCCCccccc
Q 007632 463 HVRAEGKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLF 542 (595)
Q Consensus 463 HvR~~~~~~~~~~~~~~W~kkld~~~~~rL~~~dpl~~l~~kdkid~~l~e~le~~Vkk~~dE~~g~K~rC~~~~CtKLF 542 (595)
|||++.++.+ ++..+|+++|+++|+.+|+.++|++.++++++|+++++++|++||+|++||+|||||+|++++|+|||
T Consensus 239 HvR~~~~~~~--~~~~~we~~ld~~w~~~l~~~dp~~~~lg~k~ie~~~~e~l~~~v~k~~dE~~gwK~~C~~~~C~KLF 316 (358)
T 3ax1_A 239 HVRAEGKVSD--AKGDENESKFDSHWQERLKGQDPLEVMAAKEKIDAAATEALDPHVRKIRDEKYGWKYGCGAKGCTKLF 316 (358)
T ss_dssp CBC------------CHHHHHHHHHHHHHHHSCCHHHHHHCHHHHHHHHHHHHGGGEEEEECSSSSEEEEECSSSCCCEE
T ss_pred eecCCCCCCC--CchhhHHHHHHHHHHHHHcccChHHHHhcCccHHHHHHHHHHHHHHHHhhcccccccCCCCCCcCccc
Confidence 9999877553 36779999999999999999999998888889999999999999999999999999999999999999
Q ss_pred cchhHHHHHhhhhChHHHHHHHHhHHHHHHHHhhhcCCC
Q 007632 543 HAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPD 581 (595)
Q Consensus 543 Kg~EFV~KHI~nKH~E~V~ev~~kv~E~~yfnNYl~DP~ 581 (595)
||++||+|||+|||+|+|++++++|.|.+||+|||.--+
T Consensus 317 k~~eFV~KHi~~KH~e~v~~~~~~v~~~~~~~~~~~~~~ 355 (358)
T 3ax1_A 317 HAAEFVYKHLKLKHTELVTELTTKVREELYFQNYLEHHH 355 (358)
T ss_dssp SSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999996433
No 2
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=83.68 E-value=0.57 Score=39.06 Aligned_cols=39 Identities=18% Similarity=0.439 Sum_probs=31.8
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++..+.|+ .|.|. .|+|.|.....+.+||...|+.
T Consensus 44 L~~H~~~H~~~k---~~~C~--~C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 44 QERHLRLLHAAQ---VFPCK--YCPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp HHHHHHTTSCSS---SEECT--TSSCEESSHHHHHHHHHTTCTT
T ss_pred HhhhhhhccCCC---ccCCC--CCCCEeCCHHHHHHhCcccCcC
Confidence 555666665553 69998 4999999999999999999975
No 3
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=83.63 E-value=0.26 Score=36.36 Aligned_cols=40 Identities=25% Similarity=0.503 Sum_probs=30.9
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChHH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E~ 559 (595)
|..+++..+.+ ..|.|.+ |+|.|.....+..||...|...
T Consensus 18 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 18 LKRHYRSHTNE---KPYPCGL--CNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp HHHHHHTTTSS---CSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred HHHHHHHhCCC---CCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence 44566554444 2699985 9999999999999999888754
No 4
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=81.84 E-value=0.55 Score=35.83 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=30.2
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChHH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E~ 559 (595)
|..+++..+.+ ..|.|.+ |+|.|....-+..|+...|.++
T Consensus 25 L~~H~~~H~~~---~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~ 64 (70)
T 1x5w_A 25 LRIHERIHCTD---RPFKCNY--CSFDTKQPSNLSKHMKKFHGDM 64 (70)
T ss_dssp HHHHHGGGCCS---CSEECSS--SSCEESSHHHHHHHHHHHHSSS
T ss_pred HHHHHHHcCCC---CCEeCCC--CCCccCCHHHHHHHHHHHhCCC
Confidence 44555554444 2599985 9999999999999999888763
No 5
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.80 E-value=0.95 Score=35.13 Aligned_cols=29 Identities=31% Similarity=0.623 Sum_probs=25.7
Q ss_pred CccccCCCCccccccchhHHHHHhhhhChHH
Q 007632 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (595)
Q Consensus 529 ~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E~ 559 (595)
..|.|.+ |+|.|....-+.+|+...|...
T Consensus 37 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 37 LRFPCEF--CGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp CCEECTT--TCCEESSHHHHHHHHHHTSTTT
T ss_pred cccCCCC--CCchhCCHHHHHHHHHHhCCCC
Confidence 3799985 9999999999999999999863
No 6
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=81.11 E-value=0.88 Score=32.92 Aligned_cols=39 Identities=28% Similarity=0.438 Sum_probs=30.2
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++..+.+ -.|.|.. |+|.|.....+..|+...|.+
T Consensus 17 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 55 (57)
T 1bbo_A 17 LKKHIRTHTDV---RPYHCTY--CNFSFKTKGNLTKHMKSKAHS 55 (57)
T ss_dssp HHHHHHHTSSC---CCEECSS--SSCEESSHHHHHHHHHSSSSC
T ss_pred HHHHHHhcCCC---CCccCCC--CCchhcCHHHHHHHHHHhccc
Confidence 45566554444 3699985 999999999999999988765
No 7
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=80.89 E-value=1 Score=27.26 Aligned_cols=24 Identities=25% Similarity=0.685 Sum_probs=20.2
Q ss_pred cccCCCCccccccchhHHHHHhhhhC
Q 007632 531 YGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 531 ~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
|.|. .|+|.|....-+..|+..-+
T Consensus 2 ~~C~--~C~k~f~~~~~l~~H~~~h~ 25 (27)
T 1znf_A 2 YKCG--LCERSFVEKSALSRHQRVHK 25 (27)
T ss_dssp CBCS--SSCCBCSSHHHHHHHGGGTC
T ss_pred ccCC--CCCCcCCCHHHHHHHHHHcC
Confidence 6787 49999999999999997533
No 8
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=80.75 E-value=0.82 Score=28.08 Aligned_cols=26 Identities=27% Similarity=0.482 Sum_probs=22.5
Q ss_pred cccCCCCccccccchhHHHHHhhhhChH
Q 007632 531 YGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 531 ~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|.|. .|+|.|.....+..|+..-|.+
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~~h~~~ 28 (30)
T 1klr_A 3 YQCQ--YCEFRSADSSNLKTHIKTKHSK 28 (30)
T ss_dssp CCCS--SSSCCCSCSHHHHHHHHHHTSS
T ss_pred ccCC--CCCCccCCHHHHHHHHHHHccC
Confidence 6798 5999999999999999876654
No 9
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=80.45 E-value=1 Score=27.90 Aligned_cols=26 Identities=27% Similarity=0.719 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|. .|+|.|.....+..|+...|.
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 2 AYACG--LCNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp CSBCT--TTCCBCSSSHHHHHHHTTTSC
T ss_pred CcCCc--ccCcccCChHHHHHHHHHHcc
Confidence 37897 599999999999999766664
No 10
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.35 E-value=0.88 Score=37.47 Aligned_cols=28 Identities=21% Similarity=0.390 Sum_probs=23.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChHH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E~ 559 (595)
.|.|.+ |+|.|+...-+.+|++..|.++
T Consensus 54 ~~~C~~--C~k~F~~~~~L~~H~~~h~~~k 81 (98)
T 2gqj_A 54 ALKCQH--CRKQFKSKAGLNYHTMAEHSAK 81 (98)
T ss_dssp HHSCSS--SCCCCSCHHHHHHHHHHHSCSC
T ss_pred CEECCC--CCCccCCHHHHHHHHHHHcCCC
Confidence 688885 9999999999999988888663
No 11
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=79.10 E-value=1.8 Score=34.47 Aligned_cols=41 Identities=27% Similarity=0.459 Sum_probs=29.4
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++....+. ...|.|.+ |+|.|....-+.+||+..|..
T Consensus 51 l~~H~~~h~~~~-~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 51 MSYHVRSHDGSV-GKPYICQS--CGKGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp HHHHHHHHCCCC-CSSBCCSS--SCCCBSSHHHHHHHHHHTSCC
T ss_pred HHHHHHHhcCCC-CCceECCC--ccchhCCHHHHHHHHHHhcCC
Confidence 444554443321 13689984 999999999999999998864
No 12
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=79.09 E-value=1 Score=28.57 Aligned_cols=28 Identities=18% Similarity=0.370 Sum_probs=22.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|....|+|.|....-+..|+..-..
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~ 29 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRTHTG 29 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence 3678755799999999999999976433
No 13
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=78.97 E-value=0.79 Score=33.04 Aligned_cols=27 Identities=26% Similarity=0.477 Sum_probs=25.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
-|.|++ |-|-|.+++-+.+|-.++|.+
T Consensus 5 GFiCP~--C~~~l~s~~~L~~Hye~~H~~ 31 (34)
T 3mjh_B 5 GFICPQ--CMKSLGSADELFKHYEAVHDA 31 (34)
T ss_dssp EEECTT--TCCEESSHHHHHHHHHHHTSS
T ss_pred ccCCcH--HHHHcCCHHHHHHHHHhcccc
Confidence 399995 999999999999999999986
No 14
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=78.85 E-value=1.1 Score=28.44 Aligned_cols=27 Identities=30% Similarity=0.581 Sum_probs=22.4
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|....|+|.|....-+..|+..-+
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~ 29 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKSHQ 29 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence 478975569999999999999997643
No 15
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=77.51 E-value=0.99 Score=29.16 Aligned_cols=27 Identities=26% Similarity=0.503 Sum_probs=23.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |+|.|....-+..|+..-+.+
T Consensus 7 ~~~C~~--C~k~f~~~~~L~~H~~~h~~~ 33 (35)
T 2elx_A 7 GYVCAL--CLKKFVSSIRLRSHIREVHGA 33 (35)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHTSCT
T ss_pred CeECCC--CcchhCCHHHHHHHHHHHcCC
Confidence 589984 999999999999999875544
No 16
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=76.84 E-value=1 Score=29.98 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+..|+|.|....-+..|+..
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH
Confidence 5889866799999999999999875
No 17
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=76.29 E-value=0.97 Score=30.27 Aligned_cols=25 Identities=24% Similarity=0.608 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+..|+|.|.....+..|+..
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 5899866799999999999999875
No 18
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=76.12 E-value=1.3 Score=27.16 Aligned_cols=26 Identities=23% Similarity=0.575 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|. .|+|.|.....+..|+..-+.
T Consensus 2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~ 27 (29)
T 1ard_A 2 SFVCE--VCTRAFARQEHLKRHYRSHTN 27 (29)
T ss_dssp CCBCT--TTCCBCSSHHHHHHHHHHHSC
T ss_pred CeECC--CCCcccCCHHHHHHHHHHhcC
Confidence 37898 499999999999999886443
No 19
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=76.10 E-value=2.3 Score=30.61 Aligned_cols=38 Identities=24% Similarity=0.345 Sum_probs=28.3
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhCh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
|..+++..+.+ -.|.|.+ |+|.|....-+..|+...|.
T Consensus 20 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 20 LNIHLRTHTGE---KPYKCEF--CEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp HHHHHHHHHCC---CCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred HHHHHHHcCCC---CCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence 44455555444 2589985 99999999999999988773
No 20
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=74.57 E-value=1.4 Score=31.68 Aligned_cols=27 Identities=22% Similarity=0.445 Sum_probs=23.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |+|.|.-...+.+|+...|..
T Consensus 7 p~~C~~--C~k~F~~~~~L~~H~~~~H~~ 33 (48)
T 3iuf_A 7 PYACDI--CGKRYKNRPGLSYHYAHSHLA 33 (48)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHSSCC
T ss_pred CEECCC--cCcccCCHHHHHHHhhhhcCC
Confidence 589985 999999999999999855654
No 21
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.50 E-value=1.1 Score=29.55 Aligned_cols=27 Identities=37% Similarity=0.891 Sum_probs=23.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.. |+|.|....-+..|+..-+.|
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~ 35 (37)
T 2elo_A 9 SYSCPV--CEKSFSEDRLIKSHIKTNHPE 35 (37)
T ss_dssp CCEETT--TTEECSSHHHHHHHHHHHCSS
T ss_pred CcCCCC--CCCccCCHHHHHHHHHHHcCC
Confidence 589985 999999999999999875544
No 22
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=74.45 E-value=1.8 Score=28.45 Aligned_cols=25 Identities=20% Similarity=0.514 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|. .|+|.|.....+..|+..-+
T Consensus 11 ~~~C~--~C~k~f~~~~~l~~H~~~H~ 35 (37)
T 1p7a_A 11 PFQCP--DCDRSFSRSDHLALHRKRHM 35 (37)
T ss_dssp SBCCT--TTCCCBSSHHHHHHHHGGGT
T ss_pred CccCC--CCCcccCcHHHHHHHHHHhc
Confidence 68998 59999999999999987643
No 23
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=73.43 E-value=2 Score=32.85 Aligned_cols=38 Identities=24% Similarity=0.335 Sum_probs=27.8
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhCh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
|..+++..+.+ ..|.|.+ |.|.|....-+.+|++.-+.
T Consensus 30 L~~H~~~h~~~---~~~~C~~--C~~~f~~~~~L~~H~~~H~~ 67 (72)
T 1x6e_A 30 LVQHQRVHTGE---KPYKCLE--CGKAFSQNSGLINHQRIHTS 67 (72)
T ss_dssp HHHHHHGGGCS---CCEECSS--SCCEESSHHHHHHHHHHHHS
T ss_pred HHHHHHhcCCC---CCeECCC--CCcccCCHHHHHHHHHhcCC
Confidence 44555555444 3689985 99999999999999976443
No 24
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=73.34 E-value=1.3 Score=27.18 Aligned_cols=26 Identities=23% Similarity=0.506 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|. .|+|.|....-+..|+..-+.
T Consensus 3 ~~~C~--~C~~~f~~~~~l~~H~~~h~~ 28 (30)
T 2m0d_A 3 PYQCD--YCGRSFSDPTSKMRHLETHDT 28 (30)
T ss_dssp CEECT--TTCCEESCHHHHHHHHHTTCC
T ss_pred CccCC--CCCcccCCHHHHHHHHHHhcc
Confidence 47898 499999999999999976443
No 25
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=72.46 E-value=1.5 Score=33.90 Aligned_cols=27 Identities=22% Similarity=0.480 Sum_probs=24.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.. |+|.|....-+..|++..|+.
T Consensus 45 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 45 KFHCPH--CDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred ccCCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 699985 999999999999999999964
No 26
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.05 E-value=1.8 Score=28.16 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|. .|+|.|....-+..|+..-+.
T Consensus 9 ~~~C~--~C~k~f~~~~~l~~H~~~H~~ 34 (36)
T 2elr_A 9 THLCD--MCGKKFKSKGTLKSHKLLHTA 34 (36)
T ss_dssp SCBCT--TTCCBCSSHHHHHHHHHHHSS
T ss_pred CeecC--cCCCCcCchHHHHHHHHHhcC
Confidence 58998 499999999999999876443
No 27
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=72.04 E-value=1.4 Score=27.02 Aligned_cols=25 Identities=28% Similarity=0.672 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|. .|+|.|.....+..|+..-+
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~H~ 26 (29)
T 1rik_A 2 KFACP--ECPKRFMRSDHLTLHILLHE 26 (29)
T ss_dssp CEECS--SSSCEESCSHHHHHHHTGGG
T ss_pred CccCC--CCCchhCCHHHHHHHHHHhc
Confidence 36798 59999999999999997633
No 28
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=71.96 E-value=2.5 Score=35.01 Aligned_cols=39 Identities=21% Similarity=0.397 Sum_probs=30.2
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++..+.+ -.|.|.+ |+|.|....-+.+|+...|..
T Consensus 82 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 82 LRLHMVSHTGE---MPYKCSS--CSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp HHHHHHHHSSS---CSEECSS--SCCEESSHHHHHHHHHHTSSC
T ss_pred HHHHHHHcCCC---CCccCCC--ccchhCCHHHHHHHHHHHCCC
Confidence 44455554444 2599985 999999999999999999975
No 29
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=71.52 E-value=2 Score=33.01 Aligned_cols=39 Identities=21% Similarity=0.376 Sum_probs=27.6
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++..+.+ ..|.|.+ |+|.|....-+..|++.-+.|
T Consensus 33 l~~H~~~H~~~---~~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 71 (74)
T 2lce_A 33 LASHKTVHTGE---KPYRCNI--CGAQFNRPANLKTHTRIHSGE 71 (74)
T ss_dssp HHHHHHHHCCC---CSEECTT--TCCEESCHHHHHHHHHHHCCS
T ss_pred HHHHHHHcCCC---CCEECCC--CCchhCCHHHHHHHHHhcCCC
Confidence 44455554444 2588984 999999999999998765544
No 30
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=70.73 E-value=1.5 Score=26.60 Aligned_cols=26 Identities=27% Similarity=0.512 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|. .|+|.|....-+..|+..-+.
T Consensus 2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~ 27 (29)
T 2m0e_A 2 EHKCP--HCDKKFNQVGNLKAHLKIHIA 27 (29)
T ss_dssp CCCCS--SCCCCCCTTTHHHHHHHHHHS
T ss_pred CCcCC--CCCcccCCHHHHHHHHHHhcc
Confidence 37898 499999999999999876443
No 31
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=70.38 E-value=1.8 Score=32.27 Aligned_cols=27 Identities=30% Similarity=0.514 Sum_probs=23.9
Q ss_pred CccccCCCCccccccchhHHHHHhhhhCh
Q 007632 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 529 ~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
..|.|.. |+|.|.....+..|++..|.
T Consensus 39 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 39 KVYPCPF--CFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred cCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence 3699985 99999999999999998884
No 32
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.37 E-value=1.1 Score=29.99 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=22.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
-|.|. .|+|.|....-+..|+...|..
T Consensus 9 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~ 35 (37)
T 2elm_A 9 LYYCS--QCHYSSITKNCLKRHVIQKHSN 35 (37)
T ss_dssp EEECS--SSSCEEECHHHHHHHHHHHTCC
T ss_pred CeECC--CCCcccCCHHHHHHHHHHHccC
Confidence 58998 5999999999999996556643
No 33
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.52 E-value=2 Score=28.11 Aligned_cols=23 Identities=22% Similarity=0.533 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|.....+..|+..
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHI--CERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTT
T ss_pred CeECCC--CCCccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 34
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=69.32 E-value=3 Score=31.96 Aligned_cols=39 Identities=21% Similarity=0.471 Sum_probs=28.5
Q ss_pred hhhHHH-hhhhcccCCccccCCCCccccccchhHHHHHhhhhC
Q 007632 515 LDPFVR-KIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 515 le~~Vk-k~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
|..+++ ..+.+ ..|.|...+|+|.|....-+..|+..-+
T Consensus 25 L~~H~~~~H~~~---~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 64 (79)
T 2dlk_A 25 LNHHKKYQHIHQ---KSFSCPEPACGKSFNFKKHLKEHMKLHS 64 (79)
T ss_dssp HHHHHHHGGGSC---CCEECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC---CCeECCCCCCcCccCCHHHHHHHHHHhC
Confidence 455665 34344 3689986679999999999999997543
No 35
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=72.23 E-value=0.98 Score=27.99 Aligned_cols=25 Identities=24% Similarity=0.384 Sum_probs=20.8
Q ss_pred cccCCCCccccccchhHHHHHhhhhCh
Q 007632 531 YGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 531 ~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
|.|. .|+|.|.....+..|+..-+.
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~~H~~ 27 (29)
T 2lvt_A 3 CQCV--MCGKAFTQASSLIAHVRQHTG 27 (29)
Confidence 6787 599999999999999875443
No 36
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=69.05 E-value=2.6 Score=27.52 Aligned_cols=25 Identities=32% Similarity=0.773 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|. .|+|.|....-+..|+..-.
T Consensus 2 p~~C~--~C~k~F~~~~~L~~H~~~H~ 26 (33)
T 1rim_A 2 KFACP--ECPKRFMRSDHLSKHITLHE 26 (33)
T ss_dssp CCCCS--SSCCCCSSHHHHHHHHHHHT
T ss_pred cccCC--CCCchhCCHHHHHHHHHHhC
Confidence 37898 59999999999999987533
No 37
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.01 E-value=2.3 Score=30.17 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
-|.|...+|+|.|....-+.+|++.
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 4899866799999999999999874
No 38
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=68.88 E-value=2 Score=26.46 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=20.0
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|. .|+|.|.....+..|+..
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 3 PYRCP--LCRAGCPSLASMQAHMRG 25 (27)
T ss_dssp TEEET--TTTEEESCHHHHHHHHTT
T ss_pred CcCCC--CCCcccCCHHHHHHHHHh
Confidence 47898 599999999999999864
No 39
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=68.71 E-value=2.1 Score=27.76 Aligned_cols=26 Identities=23% Similarity=0.517 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 7 ~~~C~~--C~k~f~~~~~l~~H~~~H~~ 32 (35)
T 1srk_A 7 PFVCRI--CLSAFTTKANCARHLKVHTD 32 (35)
T ss_dssp CEECSS--SCCEESSHHHHHHHHGGGTS
T ss_pred CeeCCC--CCcccCCHHHHHHHHHHcCC
Confidence 588984 99999999999999876443
No 40
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=68.16 E-value=2.5 Score=25.72 Aligned_cols=23 Identities=22% Similarity=0.469 Sum_probs=19.9
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|. .|+|.|....-+..|+..
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCS--LCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECS--SSSCEESSHHHHHHHHHH
T ss_pred CccCC--CcChhhCCHHHHHHHHHH
Confidence 47898 599999999999999864
No 41
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=68.15 E-value=2.6 Score=25.67 Aligned_cols=24 Identities=25% Similarity=0.624 Sum_probs=20.2
Q ss_pred cccCCCCccccccchhHHHHHhhh
Q 007632 531 YGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 531 ~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
|.|....|+|.|....-+..|+..
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCcCCcCcCccCCHHHHHHHHHH
Confidence 678744699999999999999865
No 42
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.02 E-value=1.9 Score=28.24 Aligned_cols=25 Identities=24% Similarity=0.620 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|. .|+|.|....-+..|+..-+
T Consensus 9 ~~~C~--~C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2els_A 9 IFTCE--YCNKVFKFKHSLQAHLRIHT 33 (36)
T ss_dssp CEECT--TTCCEESSHHHHHHHHHHHC
T ss_pred CEECC--CCCceeCCHHHHHHHHHHhC
Confidence 68998 49999999999999987643
No 43
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=67.78 E-value=1.7 Score=26.42 Aligned_cols=24 Identities=25% Similarity=0.635 Sum_probs=20.3
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|. .|+|.|....-+..|+..-
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~H 25 (29)
T 2m0f_A 2 PLKCR--ECGKQFTTSGNLKRHLRIH 25 (29)
T ss_dssp CEECT--TTSCEESCHHHHHHHHHHH
T ss_pred CccCC--CCCCccCChhHHHHHHHHh
Confidence 36798 4999999999999998763
No 44
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=70.94 E-value=1.1 Score=27.68 Aligned_cols=27 Identities=22% Similarity=0.575 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|. .|+|.|....-+..|+..-+.+
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~h~~~ 29 (30)
T 2lvr_A 3 PYVCI--HCQRQFADPGALQRHVRIHTGE 29 (30)
Confidence 47897 5999999999999998765443
No 45
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=67.30 E-value=1.8 Score=30.76 Aligned_cols=27 Identities=26% Similarity=0.534 Sum_probs=22.8
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+..|+|.|....-+..|+..-.
T Consensus 18 ~~~C~~~~C~k~F~~~~~L~~H~~~H~ 44 (47)
T 1ncs_A 18 TFECLFPGCTKTFKRRYNIRSHIQTHL 44 (47)
T ss_dssp EEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred CeECCCCCCCCccCCHHHHHHHHHHcc
Confidence 689975579999999999999987633
No 46
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=67.16 E-value=3.3 Score=32.64 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=23.1
Q ss_pred cccCCCCccccccchhHHHHHhhhhCh
Q 007632 531 YGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 531 ~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
+.|.-..|+|.|..++.+.+||.+.|-
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv 28 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHV 28 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhcc
Confidence 467777899999999999999987773
No 47
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=66.85 E-value=3.2 Score=32.99 Aligned_cols=39 Identities=21% Similarity=0.374 Sum_probs=28.4
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++....+ -.|.|.+ |+|.|....-+.+|++.-|.+
T Consensus 52 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 52 LNKHLRIHSDE---RPFKCQI--CPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp HHHHHHHSCCC---CCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred HHHHHHHhCCC---CCccCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 44455544344 2689985 999999999999999877765
No 48
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.52 E-value=3 Score=28.82 Aligned_cols=26 Identities=27% Similarity=0.588 Sum_probs=22.3
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ep1_A 12 PYECSD--CGKSFIKKSQLHVHQRIHTG 37 (46)
T ss_dssp SSCCSS--SCCCCSSHHHHHHHHGGGSS
T ss_pred CcCCCC--CCchhCCHHHHHHHHHHhCC
Confidence 689984 99999999999999986443
No 49
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.96 E-value=2.2 Score=27.71 Aligned_cols=25 Identities=20% Similarity=0.398 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elt_A 9 PYKCPQ--CSYASAIKANLNVHLRKHT 33 (36)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHHT
T ss_pred CCCCCC--CCcccCCHHHHHHHHHHcc
Confidence 589984 9999999999999987533
No 50
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.95 E-value=2.7 Score=28.64 Aligned_cols=24 Identities=25% Similarity=0.639 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (44)
T 2en7_A 12 PYVCNE--CGKAFRSKSYLIIHTRTH 35 (44)
T ss_dssp SSCCTT--TCCCCSSHHHHHHHHTTT
T ss_pred CeECCC--CCCccCCHHHHHHHhhhc
Confidence 589985 999999999999999753
No 51
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.84 E-value=2.5 Score=27.57 Aligned_cols=25 Identities=12% Similarity=0.377 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elq_A 9 PFKCSL--CEYATRSKSNLKAHMNRHS 33 (36)
T ss_dssp SEECSS--SSCEESCHHHHHHHHHHSS
T ss_pred CccCCC--CCchhCCHHHHHHHHHHhc
Confidence 589984 9999999999999987633
No 52
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.67 E-value=2.8 Score=29.25 Aligned_cols=26 Identities=23% Similarity=0.451 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|. .|.|.|.....+..|+..-+.
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2eom_A 12 GHRCS--DCGKFFLQASNFIQHRRIHTG 37 (46)
T ss_dssp SCCCS--SSCCCCSSHHHHHHHHHHHSS
T ss_pred CcCCC--CCCCeeCChHHHHHHHHHhCC
Confidence 68998 499999999999999876443
No 53
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.41 E-value=3.4 Score=34.57 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=27.8
Q ss_pred CccccCCCCcccccc-------chhHHHHHhhhhChHHHHHH
Q 007632 529 WKYGCGAKGCTKLFH-------AAEFVHKHLKLKHPELVIEL 563 (595)
Q Consensus 529 ~K~rC~~~~CtKLFK-------g~EFV~KHI~nKH~E~V~ev 563 (595)
.+..|. .|.|.|. +..=+..||..+|++.|+..
T Consensus 27 ~~A~Ck--~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~~ 66 (76)
T 2djr_A 27 QYATCR--LCGRQVSRGPGVNVGTTALWKHLKSMHREELEKS 66 (76)
T ss_dssp SCEEES--SSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHHT
T ss_pred CEEECC--CCCCccCCCCCCCCchHHHHHHHHHHCHHHHHhc
Confidence 478998 5999998 57789999999999977654
No 54
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.15 E-value=2.6 Score=32.57 Aligned_cols=39 Identities=23% Similarity=0.382 Sum_probs=28.0
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++..+.+ -.|.|.+ |+|.|.....+..|+..-+.+
T Consensus 34 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 72 (77)
T 2cot_A 34 LSKHRRTHTGE---KPYKCDE--CGKAFIQRSHLIGHHRVHTGS 72 (77)
T ss_dssp HHHHHTTTCCS---CSEECSS--SCCEESSHHHHHHHGGGSCCC
T ss_pred HHHHHHHcCCC---cCeeCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 44455544333 2589985 999999999999999765544
No 55
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=65.10 E-value=3.3 Score=35.81 Aligned_cols=40 Identities=30% Similarity=0.454 Sum_probs=29.3
Q ss_pred hhhHH-HhhhhcccCCccccCCCCccccccchhHHHHHhhhhCh
Q 007632 515 LDPFV-RKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 515 le~~V-kk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
|..++ +..+.+ ..|.|.+.+|+|.|....-+.+|+.+.|+
T Consensus 115 L~~H~~~~H~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~hhg 155 (155)
T 2gli_A 115 RAKHQNRTHSNE---KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155 (155)
T ss_dssp THHHHHHTTCSC---CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred HHHHHHHhcCCC---CCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence 45565 333333 36899866799999999999999988774
No 56
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.04 E-value=2.6 Score=29.21 Aligned_cols=27 Identities=26% Similarity=0.586 Sum_probs=22.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |+|.|....-+..|+..-+.+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~~~ 38 (46)
T 2emi_A 12 HYECSE--CGKAFIQKSTLSMHQRIHRGE 38 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHGGGCSC
T ss_pred CCCCCC--CCcccCCHHHHHHHHhHhCCC
Confidence 689985 999999999999998864433
No 57
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.99 E-value=3.1 Score=28.80 Aligned_cols=25 Identities=24% Similarity=0.634 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq2_A 12 PYQCNE--CGKAFSQTSKLARHQRVHT 36 (46)
T ss_dssp SSSCCS--SCCCCSSHHHHHHHGGGGC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 689985 9999999999999997643
No 58
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=64.97 E-value=3.1 Score=31.89 Aligned_cols=28 Identities=25% Similarity=0.674 Sum_probs=25.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|....|+|.|....-+..|+...|.
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 34 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHI 34 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGG
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhC
Confidence 6899988899999999999999987775
No 59
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=64.77 E-value=4.4 Score=33.17 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=30.5
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChHHHH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVI 561 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E~V~ 561 (595)
|..+++....+ ..|.|.+ |+|.|.....+.+|+..-|.....
T Consensus 53 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~ 94 (110)
T 2csh_A 53 LVGHMKIHTGI---KPYECNI--CAKRFMWRDSFHRHVTSCTKSYEA 94 (110)
T ss_dssp HHHHHTTTCCC---CCEECSS--SCCEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC---CCeeCCC--CcchhcCHHHHHHHHHHccccccc
Confidence 33454443333 3689985 999999999999999988876443
No 60
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.75 E-value=4 Score=28.19 Aligned_cols=26 Identities=27% Similarity=0.533 Sum_probs=22.4
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+...|.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~~H~ 37 (47)
T 2epx_A 12 PYECIE--CGKAFIQNTSLIRHWRYYHT 37 (47)
T ss_dssp SBCCSS--SCCCBSSHHHHHHHHTTTTT
T ss_pred CEECCc--cCchhCChHHHHHHhHhhcC
Confidence 589985 99999999999999985553
No 61
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=64.61 E-value=4.4 Score=30.73 Aligned_cols=36 Identities=25% Similarity=0.542 Sum_probs=23.7
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLK 553 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~ 553 (595)
|..+++..+.+ -.|.|.+..|+|.|....-+.+|++
T Consensus 35 L~~H~~~H~~~---~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 35 LKAHTRTHTGE---KPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp HHHHHHHHSSS---CSEECCCTTCCCEESSHHHHHHHTT
T ss_pred HHHHHHhcCCC---CCccCCCCCCCcccCCHHHHHhHhh
Confidence 33444444344 2578865568888888888888875
No 62
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=64.53 E-value=5.3 Score=31.19 Aligned_cols=39 Identities=21% Similarity=0.458 Sum_probs=27.4
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++....+ ..|.|.+ |+|.|....-+.+|+..-+.+
T Consensus 50 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~H~~~ 88 (90)
T 1a1h_A 50 LTTHIRTHTGE---KPFACDI--CGRKFARSDERKRHTKIHLRQ 88 (90)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESSHHHHHHHHGGGGC-
T ss_pred HHHHHHHcCCC---CCccCCC--CCchhCCHHHHHHHHHHhccc
Confidence 34455544333 3689985 999999999999999875554
No 63
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.31 E-value=2.5 Score=28.52 Aligned_cols=26 Identities=23% Similarity=0.471 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|. .|+|.|.....+..|+..-+.
T Consensus 10 ~~~C~--~C~k~f~~~~~L~~H~~~H~~ 35 (41)
T 2ept_A 10 VYECQ--ECGKSFRQKGSLTLHERIHTG 35 (41)
T ss_dssp CEECS--SSCCEESSHHHHHHHGGGCCC
T ss_pred CeECC--CCCCCcCCHHHHHHHHHHhCC
Confidence 58998 499999999999999875433
No 64
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.24 E-value=3 Score=28.85 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2emg_A 12 PFICSE--CGKVFTHKTNLIIHQKIHT 36 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHTTTS
T ss_pred CEECCc--cCcccCCHHHHHHHHHHhC
Confidence 589984 9999999999999987643
No 65
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=64.06 E-value=4.8 Score=33.51 Aligned_cols=42 Identities=24% Similarity=0.391 Sum_probs=29.6
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChHH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E~ 559 (595)
|..+++..+.+ -.|.|.+..|+|.|....-+.+|+..-+.++
T Consensus 80 l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k 121 (124)
T 1ubd_C 80 LRTHVRIHTGD---RPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121 (124)
T ss_dssp HHHHHHHHHCC---CCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred HHHHHHHhCCC---CceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence 44455554444 3699976679999999999999999876654
No 66
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.03 E-value=3 Score=28.86 Aligned_cols=25 Identities=28% Similarity=0.589 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq1_A 12 PYKCNE--CGKAFRAHSNLTTHQVIHT 36 (46)
T ss_dssp CCCCTT--TTCCCSSHHHHHHHHTTTC
T ss_pred CeECCc--CChhhCCHHHHHHHHHHhC
Confidence 689984 9999999999999987543
No 67
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=63.61 E-value=3.3 Score=25.20 Aligned_cols=23 Identities=26% Similarity=0.626 Sum_probs=19.9
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|. .|+|.|....-+..|+..
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCS--VCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECS--SSCCEESCHHHHHHHHTT
T ss_pred CccCC--CCCcccCCHHHHHHHHHh
Confidence 47898 599999999999999874
No 68
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=63.45 E-value=2.8 Score=31.86 Aligned_cols=30 Identities=20% Similarity=0.417 Sum_probs=25.1
Q ss_pred CccccCCCCccccccchhHHHHHhhhhChH
Q 007632 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 529 ~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
-.|.|...+|.|.|.....+..|+..-+.+
T Consensus 16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 45 (72)
T 2epa_A 16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGE 45 (72)
T ss_dssp CCEECSSTTTCCEESSHHHHHHHHHHHSSS
T ss_pred CceeCCCCCCccccCCHHHHHHHHHhcCCC
Confidence 378998778999999999999999765443
No 69
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.26 E-value=3.2 Score=28.79 Aligned_cols=25 Identities=24% Similarity=0.615 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2enh_A 12 PYECDV--CRKAFSHHASLTQHQRVHS 36 (46)
T ss_dssp SCBCTT--TCCBCSSSHHHHHHGGGSC
T ss_pred CcCCCC--cCchhCCHHHHHHHHHHhC
Confidence 689985 9999999999999987633
No 70
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=63.25 E-value=4.5 Score=33.53 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=27.9
Q ss_pred CccccCCCCcccccc---chhHHHHHhhhhChHHHHHHHH
Q 007632 529 WKYGCGAKGCTKLFH---AAEFVHKHLKLKHPELVIELTS 565 (595)
Q Consensus 529 ~K~rC~~~~CtKLFK---g~EFV~KHI~nKH~E~V~ev~~ 565 (595)
.+..|.+ |.|.|+ +..=+..||..||++.+.++.+
T Consensus 28 ~~a~Ck~--C~~~l~~~g~TSnL~rHL~~~H~~e~~~~~~ 65 (73)
T 2ct5_A 28 KKIYCRI--CMAQIAYSGNTSNLSYHLEKNHPEEFCEFVK 65 (73)
T ss_dssp SCCEETT--TTEECCCCSSTHHHHHHHHHSCHHHHHHHCC
T ss_pred CEEECCC--CCccccCCCChHhHHHHHHHHCHHHHHHHHH
Confidence 3778984 999976 4566899999999998887643
No 71
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.99 E-value=3.9 Score=28.34 Aligned_cols=25 Identities=24% Similarity=0.654 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yth_A 12 PFQCEE--CGKRFTQNSHLHSHQRVHT 36 (46)
T ss_dssp SBCCSS--SCCCBSSHHHHHHHGGGGT
T ss_pred CCCCCC--CCcccCCHHHHHHHHHhcC
Confidence 589985 9999999999999987643
No 72
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.99 E-value=3.9 Score=28.10 Aligned_cols=27 Identities=19% Similarity=0.450 Sum_probs=22.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|. .|+|.|.....+..|+..-+.+
T Consensus 10 ~~~C~--~C~k~f~~~~~L~~H~~~H~~~ 36 (43)
T 2yrm_A 10 AFFCN--ECDCRFSEEASLKRHTLQTHSD 36 (43)
T ss_dssp CBCCS--SSCCCBSSHHHHHHHHHHHTCT
T ss_pred CEECC--CCCCeeCChHHHHHHHHhhCCC
Confidence 58998 4999999999999998764443
No 73
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.94 E-value=2.3 Score=29.40 Aligned_cols=26 Identities=23% Similarity=0.501 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~~ 37 (45)
T 2epu_A 12 PFECTH--CGKSFRAKGNLVTHQRIHTG 37 (45)
T ss_dssp SEEETT--TTEEESSHHHHHHHHTTTSS
T ss_pred CccCCC--CCCccCChHHHHHHHHHhCC
Confidence 589985 99999999999999876433
No 74
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.69 E-value=3.4 Score=28.66 Aligned_cols=25 Identities=20% Similarity=0.565 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2en9_A 12 LFKCNE--CKKTFTQSSSLTVHQRIHT 36 (46)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHHT
T ss_pred CEECCc--cCcccCCHHHHHHHHHHcC
Confidence 589985 9999999999999987533
No 75
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.66 E-value=4.5 Score=33.64 Aligned_cols=38 Identities=16% Similarity=0.317 Sum_probs=28.6
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++.. .| -.|.|.+ |+|.|....-+.+||...|.+
T Consensus 51 L~~H~~~h-~~---k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 51 LKKHMENC-KQ---EMFTCHH--CGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp HHHHHHHH-CC---CCCCCSS--SCCCCSSHHHHHHHHHHHTCC
T ss_pred HHHHHHHH-CC---CCeECCC--CCCeeCCHHHHHHHhHHhcCC
Confidence 44565554 33 3689984 999999999999997777754
No 76
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.53 E-value=3.7 Score=28.39 Aligned_cols=25 Identities=24% Similarity=0.640 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2enf_A 12 PYKCNE--CGKVFTQNSHLVRHRGIHT 36 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHTTTT
T ss_pred CeECCC--CCcccCCHHHHHHHHHhhC
Confidence 689984 9999999999999987543
No 77
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.47 E-value=3.3 Score=28.72 Aligned_cols=25 Identities=24% Similarity=0.615 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|.....+.+|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eoh_A 12 PYECKE--CRKTFIQIGHLNQHKRVHT 36 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHHCS
T ss_pred CcCCCC--cCchhCCHHHHHHHHHHhC
Confidence 589984 9999999999999987633
No 78
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.47 E-value=2.4 Score=29.48 Aligned_cols=26 Identities=27% Similarity=0.717 Sum_probs=22.3
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eoz_A 12 PYSCNV--CGKAFVLSAHLNQHLRVHTQ 37 (46)
T ss_dssp SEEETT--TTEEESSHHHHHHHHHHHSS
T ss_pred CeECcc--cChhhCCHHHHHHHHHHhCC
Confidence 689985 99999999999999876443
No 79
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.11 E-value=3.7 Score=28.31 Aligned_cols=25 Identities=24% Similarity=0.646 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytr_A 12 PYKCNE--CGKAFSQTSKLARHQRIHT 36 (46)
T ss_dssp TTCCTT--TCCCCSSHHHHHHHHTTTT
T ss_pred CcCCCC--CCCccCCHHHHHHHHHhcC
Confidence 689985 9999999999999987633
No 80
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.96 E-value=3.8 Score=28.24 Aligned_cols=24 Identities=21% Similarity=0.398 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eop_A 12 PHECRE--CGKSFSFNSQLIVHQRIH 35 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHTTT
T ss_pred CeeCCC--CCchhCCHHHHHHHHHHc
Confidence 689985 999999999999999763
No 81
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.95 E-value=3.4 Score=27.98 Aligned_cols=26 Identities=23% Similarity=0.585 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 11 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 36 (42)
T 2eos_A 11 PYPCEI--CGTRFRHLQTLKSHLRIHTG 36 (42)
T ss_dssp CBCCSS--SCCCBSSHHHHHHHTTTTSC
T ss_pred CEECCC--CCCccCCHHHHHHHHHhcCC
Confidence 589984 99999999999999876443
No 82
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.78 E-value=2.9 Score=29.07 Aligned_cols=25 Identities=24% Similarity=0.580 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytp_A 12 HYECSE--CGKAFARKSTLIMHQRIHT 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTTTS
T ss_pred CeECCc--CCcccCCHHHHHHHHHHhC
Confidence 589984 9999999999999987643
No 83
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.78 E-value=3.8 Score=28.31 Aligned_cols=26 Identities=19% Similarity=0.437 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2epz_A 12 PFDCID--CGKAFSDHIGLNQHRRIHTG 37 (46)
T ss_dssp SBCCTT--TCCCBSSHHHHHHHHTTTTT
T ss_pred CeECCC--CCceeCCHHHHHHHHHHhCC
Confidence 689985 99999999999999975433
No 84
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=61.62 E-value=3.3 Score=28.01 Aligned_cols=26 Identities=23% Similarity=0.525 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|. .|+|.|....-+..|+..-+.
T Consensus 10 ~~~C~--~C~k~f~~~~~L~~H~~~H~~ 35 (42)
T 2el5_A 10 PYECS--ECGKAFNRKDQLISHQRTHAG 35 (42)
T ss_dssp SEECS--SSCCEESSHHHHHHHHGGGCC
T ss_pred CccCC--CcChhhCCHHHHHHHHHhcCC
Confidence 58998 499999999999999976443
No 85
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.48 E-value=3.3 Score=28.78 Aligned_cols=24 Identities=25% Similarity=0.523 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytt_A 12 PYQCSE--CGKSFSGSYRLTQHWITH 35 (46)
T ss_dssp TTCCSS--SCCCCSSHHHHHHHHTHH
T ss_pred CeeCCC--CCcccCCHHHHHHHHHHc
Confidence 689984 999999999999998763
No 86
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.35 E-value=3.2 Score=28.76 Aligned_cols=25 Identities=28% Similarity=0.614 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep3_A 12 PYRCAE--CGKAFTDRSNLFTHQKIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTTT
T ss_pred CeECCC--CCchhCCHHHHHHHHHHcC
Confidence 589985 9999999999999997643
No 87
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=61.25 E-value=3.8 Score=28.42 Aligned_cols=25 Identities=24% Similarity=0.620 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emk_A 12 PYECKE--CGKAFSQTTHLIQHQRVHT 36 (46)
T ss_dssp SCBCSS--SCCBCSCHHHHHHHHHHHS
T ss_pred ceECCC--CCchhCCHHHHHHHHHHcC
Confidence 589985 9999999999999997533
No 88
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.13 E-value=3.5 Score=28.44 Aligned_cols=26 Identities=23% Similarity=0.442 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~~ 37 (44)
T 2epv_A 12 PYECNE--CGKAFIWKSLLIVHERTHAG 37 (44)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGSS
T ss_pred CeECCC--CCcccCchHHHHHHHhHhcC
Confidence 589984 99999999999999876433
No 89
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.09 E-value=3.7 Score=28.30 Aligned_cols=25 Identities=36% Similarity=0.650 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq4_A 12 LYNCKE--CGKSFSRAPCLLKHERLHS 36 (46)
T ss_dssp CCCBTT--TTBCCSCHHHHHHHHHHCC
T ss_pred CeECCC--CCCccCchHHHHHHHHhcC
Confidence 589984 9999999999999987643
No 90
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=61.09 E-value=3.2 Score=32.02 Aligned_cols=27 Identities=30% Similarity=0.557 Sum_probs=24.3
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |+|.|....-+..|+...|.+
T Consensus 15 ~~~C~~--C~k~f~~~~~L~~H~~~~h~~ 41 (77)
T 2ct1_A 15 PYECYI--CHARFTQSGTMKMHILQKHTE 41 (77)
T ss_dssp SEECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred CeECCC--cCchhCCHHHHHHHHHHhcCC
Confidence 599985 999999999999999988865
No 91
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.00 E-value=3.9 Score=27.51 Aligned_cols=24 Identities=25% Similarity=0.657 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H 33 (42)
T 2yte_A 10 PYSCAE--CKETFSDNNRLVQHQKMH 33 (42)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHHHT
T ss_pred CeECCC--CCCccCCHHHHHHHHHHh
Confidence 589984 999999999999998763
No 92
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.97 E-value=3.1 Score=28.75 Aligned_cols=26 Identities=19% Similarity=0.475 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ytf_A 12 PFECSE--CQKAFNTKSNLIVHQRTHTG 37 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHTSCS
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHhCC
Confidence 689985 99999999999999876443
No 93
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.85 E-value=3.9 Score=28.34 Aligned_cols=25 Identities=24% Similarity=0.620 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em6_A 12 CYKCDV--CGKEFSQSSHLQTHQRVHT 36 (46)
T ss_dssp CCBCSS--SCCBCSSHHHHHHHHTTTS
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 589985 9999999999999987533
No 94
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.84 E-value=3.6 Score=28.64 Aligned_cols=24 Identities=25% Similarity=0.638 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eon_A 12 PYKCQV--CGKAFRVSSHLVQHHSVH 35 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHTTTT
T ss_pred ccCCCC--CCcccCcHHHHHHHHHhc
Confidence 689985 999999999999998753
No 95
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.76 E-value=3.1 Score=28.69 Aligned_cols=25 Identities=28% Similarity=0.699 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yrj_A 12 PYRCGE--CGKAFAQKANLTQHQRIHT 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTTTS
T ss_pred CeECCC--CCCccCCHHHHHHHHHHcC
Confidence 689985 9999999999999987533
No 96
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.72 E-value=3.2 Score=27.95 Aligned_cols=25 Identities=24% Similarity=0.588 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 11 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2ytb_A 11 PYRCDQ--CGKAFSQKGSLIVHIRVHT 35 (42)
T ss_dssp SBCCTT--TTCCBSSHHHHHTTGGGTS
T ss_pred CeeCCC--ccchhCCHHHHHHHHHHhC
Confidence 589985 9999999999999987543
No 97
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=60.53 E-value=3.2 Score=27.76 Aligned_cols=26 Identities=23% Similarity=0.634 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 6 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 31 (39)
T 1njq_A 6 SYTCSF--CKREFRSAQALGGHMNVHRR 31 (39)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHTTCC
T ss_pred ceECCC--CCcccCCHHHHHHHHHHcCC
Confidence 589985 99999999999999876443
No 98
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.23 E-value=4 Score=28.10 Aligned_cols=25 Identities=28% Similarity=0.475 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eov_A 12 PYKCSD--CGKSFTWKSRLRIHQKCHT 36 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHHHHS
T ss_pred CccCCc--cChhhCCHHHHHHHHHhcC
Confidence 589985 9999999999999987543
No 99
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=60.01 E-value=8.7 Score=30.29 Aligned_cols=39 Identities=21% Similarity=0.450 Sum_probs=30.5
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++..+.+ ..|.|.. |+|.|....-+..|+...|..
T Consensus 19 L~~H~~~H~~~---~~~~C~~--C~k~f~~~~~L~~H~~~h~~~ 57 (88)
T 1llm_C 19 LTTHIRTHTGE---KPFACDI--CGRKFARSDERKRHRDIQHIL 57 (88)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESSHHHHHHHHHHHTHH
T ss_pred HHHHHHHcCCC---CCccCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 44555555444 3699984 999999999999999999964
No 100
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.93 E-value=3.4 Score=28.71 Aligned_cols=26 Identities=23% Similarity=0.397 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|.....+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2em4_A 12 PYECIE--CGKAFKTKSSLICHRRSHTG 37 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHSS
T ss_pred CcCCCC--CCCccCCHHHHHHHHHhcCC
Confidence 589984 99999999999999876433
No 101
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.92 E-value=3.2 Score=28.72 Aligned_cols=25 Identities=28% Similarity=0.627 Sum_probs=21.8
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2em3_A 12 PYECKV--CSKAFTQKAHLAQHQKTHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHhC
Confidence 689985 9999999999999997643
No 102
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.86 E-value=3 Score=28.81 Aligned_cols=25 Identities=24% Similarity=0.573 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq3_A 12 PYECNQ--CGKAFSVRSSLTTHQAIHT 36 (46)
T ss_dssp SSEETT--TTEECSSHHHHHHHHTTSC
T ss_pred CeECCC--CChhhCCHHHHHHHHHHhC
Confidence 689984 9999999999999987533
No 103
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=59.81 E-value=4.7 Score=27.86 Aligned_cols=25 Identities=20% Similarity=0.461 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2em0_A 12 TWKCRE--CDMCFSQASSLRLHQNVHV 36 (46)
T ss_dssp CCCCSS--SCCCCSSHHHHHHHGGGGS
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 589984 9999999999999997633
No 104
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.78 E-value=4.4 Score=28.00 Aligned_cols=25 Identities=24% Similarity=0.656 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytn_A 12 PYKCNE--CGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHGGGTS
T ss_pred CeECCC--CCCeeCCHHHHHHHhhhcC
Confidence 689985 9999999999999987643
No 105
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.74 E-value=4.1 Score=28.16 Aligned_cols=25 Identities=24% Similarity=0.656 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2yti_A 12 PYKCNE--CGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp TTCCSS--SCCCCSSHHHHHHHHTTTS
T ss_pred CeECCC--CCcccCChhHHHHHhHhcC
Confidence 689985 9999999999999987533
No 106
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.74 E-value=4.3 Score=27.84 Aligned_cols=25 Identities=24% Similarity=0.563 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|. .|+|.|.....+..|+..-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2eou_A 12 TSECQ--ECGKIFRHSSLLIEHQALHA 36 (44)
T ss_dssp CCCCT--TTCCCCSSHHHHHHHHHHHT
T ss_pred CeECC--CCCcccCCHHHHHHHHHHHC
Confidence 58998 49999999999999987633
No 107
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.63 E-value=4.1 Score=28.22 Aligned_cols=25 Identities=28% Similarity=0.786 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytq_A 12 PYGCSE--CGKAFSSKSYLIIHMRTHS 36 (46)
T ss_dssp SCBCSS--SCCBCSCHHHHHHHHTTTC
T ss_pred CcCCCc--cChhhCChHHHHHHHHHhC
Confidence 689984 9999999999999987633
No 108
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.46 E-value=3.6 Score=28.52 Aligned_cols=26 Identities=23% Similarity=0.522 Sum_probs=22.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2emf_A 12 HFECTE--CGKAFTRKSTLSMHQKIHTG 37 (46)
T ss_dssp CEECSS--SCCEESCHHHHHHHGGGTSC
T ss_pred CeECCC--CCchhCCHHHHHHHHHHhCC
Confidence 589985 99999999999999986443
No 109
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.34 E-value=3.8 Score=28.32 Aligned_cols=26 Identities=23% Similarity=0.561 Sum_probs=22.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eml_A 12 PYECSV--CGKAFSHRQSLSVHQRIHSG 37 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGSS
T ss_pred CeeCCC--cCCccCCHHHHHHHHHHhcC
Confidence 689985 99999999999999976443
No 110
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=59.34 E-value=3.4 Score=27.84 Aligned_cols=25 Identities=28% Similarity=0.478 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 11 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 35 (42)
T 2epc_A 11 PYLCGQ--CGKSFTQRGSLAVHQRSCS 35 (42)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHTT
T ss_pred CeECCC--CCcccCCHHHHHHHhhhcC
Confidence 589985 9999999999999987533
No 111
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.81 E-value=3.8 Score=27.88 Aligned_cols=25 Identities=24% Similarity=0.563 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2eof_A 12 PYECNE--CQKAFNTKSNLMVHQRTHT 36 (44)
T ss_dssp SEECTT--TCCEESCHHHHHHHHHHTT
T ss_pred CeECCC--CCcccCCHhHHHHHHHHhC
Confidence 589985 9999999999999997633
No 112
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=58.70 E-value=3.7 Score=28.46 Aligned_cols=24 Identities=21% Similarity=0.605 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2emj_A 12 PFECAE--CGKSFSISSQLATHQRIH 35 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHH
T ss_pred CEECCC--CCcccCCHHHHHHHHHHh
Confidence 689984 999999999999998753
No 113
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.60 E-value=4.7 Score=27.93 Aligned_cols=25 Identities=20% Similarity=0.458 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|. .|+|.|....-+..|+..-+
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2elz_A 12 PYKCE--DCGKGYNRRLNLDMHQRVHM 36 (46)
T ss_dssp SCBCS--SSCCBCSSHHHHHHHGGGGG
T ss_pred CeeCc--ccCchhCCHHHHHHHHHhcC
Confidence 68998 49999999999999988543
No 114
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.46 E-value=3.9 Score=28.19 Aligned_cols=24 Identities=25% Similarity=0.639 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2yts_A 12 PYICNE--CGKSFIQKSHLNRHRRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHGGGT
T ss_pred CEECCC--CChhhCChHHHHHHHHhc
Confidence 689984 999999999999998753
No 115
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.43 E-value=3.6 Score=28.38 Aligned_cols=25 Identities=28% Similarity=0.523 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eow_A 12 PYKCNE--CGKAFRARSSLAIHQATHS 36 (46)
T ss_dssp CEECTT--SCCEESSHHHHHHHHHHHC
T ss_pred Ceeccc--cCChhcCHHHHHHHHHHcC
Confidence 589985 9999999999999987643
No 116
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.36 E-value=3 Score=27.35 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=20.1
Q ss_pred ccccCCCCccccccch-hHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAA-EFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~-EFV~KHI~n 554 (595)
-|.|. .|+|.|.-. .-+..|+..
T Consensus 9 ~~~C~--~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCP--YCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECS--SSSCEECSSCHHHHHHHHH
T ss_pred CeECC--CCChhhccCHHHHHHHHHh
Confidence 58998 599999999 999999865
No 117
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.33 E-value=3.6 Score=28.38 Aligned_cols=25 Identities=20% Similarity=0.486 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2emm_A 12 PHKCNE--CGKSFIQSAHLIQHQRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred CeeCCC--CChhhCCHHHHHHHHHHhC
Confidence 689984 9999999999999987643
No 118
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.29 E-value=4.2 Score=28.09 Aligned_cols=26 Identities=23% Similarity=0.379 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2em7_A 12 PYKCEE--CGKGFICRRDLYTHHMVHTG 37 (46)
T ss_dssp SEECSS--SCCEESCHHHHHHHGGGGTT
T ss_pred CccCCC--ccchhCCHHHHHHHHHHhCC
Confidence 689985 99999999999999876433
No 119
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.22 E-value=3.6 Score=28.52 Aligned_cols=24 Identities=17% Similarity=0.499 Sum_probs=21.3
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2em5_A 12 SHQCHE--CGRGFTLKSHLNQHQRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTT
T ss_pred CeECCc--CCCccCCHHHHHHHHHHh
Confidence 689985 999999999999998763
No 120
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=58.21 E-value=8.5 Score=30.58 Aligned_cols=34 Identities=24% Similarity=0.519 Sum_probs=24.6
Q ss_pred hhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhh
Q 007632 516 DPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 516 e~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
..+++..+.+ ..|.|.+ |+|.|....-+.+|++.
T Consensus 64 ~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~ 97 (100)
T 2ebt_A 64 TRHYRKHTGA---KPFQCGV--CNRSFSRSDHLALHMKR 97 (100)
T ss_dssp HHHHHHHTSC---CSCBCSS--SCCBCSSHHHHHHHHHH
T ss_pred HHHHHHhCCC---CCeECCC--CcCccCCHHHHHHHHHH
Confidence 3344444444 2589985 99999999999999875
No 121
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=58.18 E-value=3.8 Score=28.22 Aligned_cols=25 Identities=28% Similarity=0.607 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2el4_A 12 PYGCSQ--CAKTFSLKSQLIVHQRSHT 36 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHGGGSS
T ss_pred ceECCC--CCchhCCHHHHHHHHHHhC
Confidence 589985 9999999999999997633
No 122
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.68 E-value=4 Score=28.22 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emy_A 12 PYECHE--CGKAFSRKYQLISHQRTHA 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHT
T ss_pred CcCCCC--CCcccCcHHHHHHHHHHcC
Confidence 589985 9999999999999987643
No 123
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.60 E-value=3.7 Score=28.49 Aligned_cols=24 Identities=29% Similarity=0.569 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2yto_A 12 PYKCSD--CGKAFTRKSGLHIHQQSH 35 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHH
T ss_pred CEECcc--cCCccCCHhHHHHHHHHc
Confidence 589984 999999999999998763
No 124
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=57.46 E-value=5 Score=29.15 Aligned_cols=26 Identities=31% Similarity=0.632 Sum_probs=22.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.. |.|.|....-+..|+...|.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~~H~ 37 (54)
T 2eps_A 12 PYICQS--CGKGFSRPDHLNGHIKQVHT 37 (54)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHTSC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHhcC
Confidence 689985 99999999999999986664
No 125
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.43 E-value=3.8 Score=28.36 Aligned_cols=25 Identities=24% Similarity=0.796 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ene_A 12 PYKCNE--CGKVFRHNSYLSRHQRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTTC
T ss_pred CeECCC--CCchhCChHHHHHHHhhcC
Confidence 689985 9999999999999998633
No 126
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=57.40 E-value=7.6 Score=30.04 Aligned_cols=37 Identities=30% Similarity=0.471 Sum_probs=29.0
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhCh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
|..+++..+.|+ .|.|. .|+|.|.....+.+|++. |.
T Consensus 20 L~~H~~~Ht~ek---p~~C~--~C~k~F~~~~~L~~H~~~-Ht 56 (60)
T 4gzn_C 20 LSRHRRAHLGYR---PRSCP--ECGKCFRDQSEVNRHLKV-HQ 56 (60)
T ss_dssp HHHHHHHHHTCC---CEECT--TTCCEESSHHHHHHHGGG-GS
T ss_pred HHHHHHHhCCCc---CeECC--CCCCCcCCHHHHHHHhCc-cC
Confidence 455666666663 69998 499999999999999875 53
No 127
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.29 E-value=6.3 Score=32.22 Aligned_cols=36 Identities=17% Similarity=0.301 Sum_probs=27.0
Q ss_pred hHHHhhhhcccCCccccCCCCcccccc-chhHHHHHhhhhCh
Q 007632 517 PFVRKIRDEKYGWKYGCGAKGCTKLFH-AAEFVHKHLKLKHP 557 (595)
Q Consensus 517 ~~Vkk~~dE~~g~K~rC~~~~CtKLFK-g~EFV~KHI~nKH~ 557 (595)
.+.+..+.+ -.|.|. .|+|.|. ...-+..|+..-|.
T Consensus 14 ~h~~~h~~~---~~~~C~--~C~k~f~~~~~~L~~H~~~h~~ 50 (98)
T 2gqj_A 14 QWQRAIHER---GEAVCP--TCNVVTRKTLVGLKKHMEVCQK 50 (98)
T ss_dssp HHHHTTTTT---SCCCCT--TTCCCCSSCSHHHHHHHHHHHH
T ss_pred HHHHHhccC---CCcCCC--CCCCChhhhHHHHHHHHHHHcC
Confidence 344444444 379998 4999999 99999999987655
No 128
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.28 E-value=3.9 Score=28.25 Aligned_cols=25 Identities=24% Similarity=0.579 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep0_A 12 PYKCDV--CHKSFRYGSSLTVHQRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTTS
T ss_pred CeeCcc--cCcccCChHHHHHHHHHhC
Confidence 689985 9999999999999987633
No 129
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.97 E-value=3.2 Score=28.64 Aligned_cols=23 Identities=26% Similarity=0.668 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eor_A 12 PYNCEE--CGKAFIHDSQLQEHQRI 34 (46)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH
T ss_pred CccCCC--CCCCcCCHHHHHHHHHh
Confidence 589984 99999999999999875
No 130
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.77 E-value=3.9 Score=28.28 Aligned_cols=25 Identities=24% Similarity=0.634 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eq0_A 12 PYKCHE--CGKVFRRNSHLARHQLIHT 36 (46)
T ss_dssp CEECTT--TCCEESSHHHHHHHHTTTC
T ss_pred CeECCC--CCchhCCHHHHHHHHHHcC
Confidence 689984 9999999999999987643
No 131
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=56.76 E-value=4.5 Score=29.30 Aligned_cols=27 Identities=22% Similarity=0.509 Sum_probs=22.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |+|.|....-+..|+..-+.|
T Consensus 24 ~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 50 (54)
T 1yui_A 24 PATCPI--CYAVIRQSRNLRRHLELRHFA 50 (54)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHHTTT
T ss_pred CccCCC--CCcccCCHHHHHHHHHHhccC
Confidence 689984 999999999999999764443
No 132
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.74 E-value=4 Score=27.91 Aligned_cols=25 Identities=24% Similarity=0.697 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|.....+..|+..-+
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 34 (44)
T 2emx_A 10 PFGCSC--CEKAFSSKSYLLVHQQTHA 34 (44)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHHHT
T ss_pred CccCCC--CCcccCCHHHHHHHHHHhC
Confidence 689985 9999999999999987633
No 133
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.73 E-value=4 Score=28.23 Aligned_cols=24 Identities=33% Similarity=0.602 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytj_A 12 PYICAE--CGKAFTIRSNLIKHQKIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHT
T ss_pred CeECCC--CChhhCCHHHHHHHHHHc
Confidence 689985 999999999999998753
No 134
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=56.71 E-value=4 Score=28.22 Aligned_cols=25 Identities=28% Similarity=0.720 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ema_A 12 RYKCNE--CGKVFSRNSQLSQHQKIHT 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTGGG
T ss_pred CcCCCC--CcchhCCHHHHHHHHHhcC
Confidence 689985 9999999999999987633
No 135
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.62 E-value=3.8 Score=27.96 Aligned_cols=25 Identities=28% Similarity=0.585 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2eoj_A 12 PYECCE--CGKVFSRKDQLVSHQKTHS 36 (44)
T ss_dssp SCEETT--TTEECSSHHHHHHHHTTSS
T ss_pred CeeCCC--CCCccCCHHHHHHHHHHcC
Confidence 589985 9999999999999987633
No 136
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=56.40 E-value=4.6 Score=27.99 Aligned_cols=26 Identities=23% Similarity=0.497 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2el6_A 12 PYKCSQ--CEKSFSGKLRLLVHQRMHTR 37 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHHGGGCC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcCC
Confidence 589985 99999999999999876433
No 137
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=56.23 E-value=4.5 Score=27.83 Aligned_cols=25 Identities=32% Similarity=0.636 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em9_A 12 PYNCKE--CGKSFRWASCLLKHQRVHS 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHGGGGT
T ss_pred CeECCc--cccccCChHHHHHHHHHhC
Confidence 689984 9999999999999987633
No 138
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=56.22 E-value=3.6 Score=34.82 Aligned_cols=29 Identities=28% Similarity=0.393 Sum_probs=22.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChHHH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPELV 560 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E~V 560 (595)
.|.|.. |+|.|....-+..|+...|++.|
T Consensus 100 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~~v 128 (129)
T 2wbt_A 100 TKVCPV--CKKEFTSTDSALDHVCKKHNICV 128 (129)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHTTCCCC
T ss_pred CCCCCC--CCcccCCHHHHHHHHHHHCCccC
Confidence 578874 88888888888888888877643
No 139
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=56.20 E-value=4.7 Score=35.03 Aligned_cols=41 Identities=22% Similarity=0.435 Sum_probs=30.3
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++..+.+ -.|.|.+.+|+|.|....-+.+|++.-|.|
T Consensus 108 L~~H~~~h~~~---~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 148 (155)
T 2rpc_A 108 LKIHKRTHTGE---KPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148 (155)
T ss_dssp HHHHHTTTCSS---CSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred HHHHHHhhCCC---CCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 44455554433 268998667999999999999999876655
No 140
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.20 E-value=5 Score=27.69 Aligned_cols=24 Identities=21% Similarity=0.541 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eoq_A 12 PFKCDI--CGKSFCGRSRLNRHSMVH 35 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHHT
T ss_pred CcCCCc--CCchhCCHHHHHHHHHHc
Confidence 689985 999999999999998753
No 141
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=56.14 E-value=8.9 Score=28.96 Aligned_cols=23 Identities=17% Similarity=0.660 Sum_probs=17.0
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|....-+..|++.
T Consensus 49 ~~~C~~--C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 49 PFQCRI--CMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CEECTT--TCCEESCHHHHHHHHTT
T ss_pred CeECCC--CCchhCCHHHHHHHHHh
Confidence 577874 88888888888887753
No 142
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=56.07 E-value=9.8 Score=28.96 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=23.1
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
|..+++..+.+ ..|.|.+ |+|.|....-+.+|++.-
T Consensus 45 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~H 80 (82)
T 2kmk_A 45 MKKHTFIHTGE---KPHKCQV--CGKAFSQSSNLITHSRKH 80 (82)
T ss_dssp HHHHHHHHHTC---CCEECTT--TSCEESSHHHHHHHHHHH
T ss_pred HHHHHHHhcCC---CCCcCCC--cchhhCChHHHHHHHHhh
Confidence 33444444333 2578874 888888888888887653
No 143
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.91 E-value=4.3 Score=28.04 Aligned_cols=25 Identities=24% Similarity=0.708 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytk_A 12 PYKCNE--CGKVFTQNSHLTNHWRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred CEeCCc--CCCccCCHHHHHHHHHHHC
Confidence 689985 9999999999999987543
No 144
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.79 E-value=4.7 Score=27.75 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eme_A 12 PYVCDY--CGKAFGLSAELVRHQRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGC
T ss_pred CeECCC--CChhhCCHHHHHHHHHhcC
Confidence 689985 9999999999999997533
No 145
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=60.68 E-value=2.4 Score=25.55 Aligned_cols=22 Identities=27% Similarity=0.614 Sum_probs=19.0
Q ss_pred cccCCCCccccccchhHHHHHhhh
Q 007632 531 YGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 531 ~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
|.|. .|+|.|....-+..|+..
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 3 YVCE--RCGKRFVQSSQLANHIRH 24 (26)
Confidence 6797 599999999999999864
No 146
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.68 E-value=3.7 Score=28.37 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 12 PFQCKE--CGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHHHH
T ss_pred CeeCcc--cChhhCCHHHHHHHHHH
Confidence 589985 99999999999999865
No 147
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.58 E-value=3.5 Score=28.54 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emp_A 12 PYMCNE--CGKAFSVYSSLTTHQVI 34 (46)
T ss_dssp SEECSS--SCCEESCHHHHHHHHHH
T ss_pred CeECCC--CCchhCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 148
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.56 E-value=3.7 Score=28.37 Aligned_cols=25 Identities=28% Similarity=0.703 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2en6_A 12 PYGCNE--CGKTFSQKSILSAHQRTHT 36 (46)
T ss_dssp CEEETT--TTEEESSHHHHHHHHHHHS
T ss_pred CeECCC--CCcccCchHHHHHHHHHcC
Confidence 589985 9999999999999997643
No 149
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.51 E-value=4.3 Score=28.20 Aligned_cols=23 Identities=30% Similarity=0.598 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 12 PYKCME--CGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp SSSBTT--TTBCCSSHHHHHHHHHH
T ss_pred CcCCCC--CCchhCCHHHHHHHHHH
Confidence 689984 99999999999999875
No 150
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.51 E-value=3.5 Score=28.52 Aligned_cols=23 Identities=35% Similarity=0.605 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2emh_A 12 PYICTV--CGKAFTDRSNLIKHQKI 34 (46)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCchhCCHHHHHHHHHh
Confidence 589985 99999999999999874
No 151
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=55.44 E-value=6.9 Score=31.67 Aligned_cols=27 Identities=22% Similarity=0.423 Sum_probs=22.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |+|.|....-+.+|+..-+.+
T Consensus 73 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 73 PFKCQE--CGKGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp TTSCSS--SCCCCSSHHHHHHHHHHTTSC
T ss_pred CeECCC--cCCcccCHHHHHHHHHHhCCC
Confidence 589984 999999999999998765554
No 152
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=55.43 E-value=7 Score=32.64 Aligned_cols=28 Identities=25% Similarity=0.491 Sum_probs=24.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
-|.|...+|+|-|.-..-+..|++..|.
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHT 54 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHK 54 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCC
Confidence 5899877899999999999999976664
No 153
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=55.37 E-value=4.3 Score=29.14 Aligned_cols=25 Identities=24% Similarity=0.616 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|.....+..|+..-+
T Consensus 4 ~~~C~~--C~~~f~~~~~l~~H~~~h~ 28 (57)
T 3uk3_C 4 SRECSY--CGKFFRSNYYLNIHLRTHT 28 (57)
T ss_dssp -CBCTT--TCCBCSCHHHHHHHHHHHH
T ss_pred CccCCC--CcchhCChHHHHHHHHHcC
Confidence 689985 9999999999999998643
No 154
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.29 E-value=4.7 Score=27.54 Aligned_cols=25 Identities=24% Similarity=0.600 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|. .|+|.|.....+..|+..-.
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2emb_A 12 RYECS--KCQATFNLRKHLIQHQKTHA 36 (44)
T ss_dssp SEECT--TTCCEESCHHHHHHHGGGGC
T ss_pred CeECC--CCCCccCCHHHHHHHHHHcC
Confidence 58998 59999999999999997533
No 155
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=55.27 E-value=3.7 Score=31.13 Aligned_cols=27 Identities=19% Similarity=0.694 Sum_probs=23.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+..|+|.|....-+..|+..-+
T Consensus 19 ~~~C~~~~C~k~f~~~~~l~~H~~~h~ 45 (73)
T 1f2i_G 19 PYACPVESCDRRFSRSDELTRHIRIHT 45 (73)
T ss_dssp CEECSSTTBCCEESSHHHHHHHHHHHH
T ss_pred ccCCcCCCCCCccCCHHHHHHHHHhhC
Confidence 699986679999999999999987533
No 156
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=54.88 E-value=5.6 Score=28.51 Aligned_cols=25 Identities=20% Similarity=0.498 Sum_probs=21.5
Q ss_pred cccCCCCccccccchhHHHHHhhhhCh
Q 007632 531 YGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 531 ~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
|.|. .|+|.|....-+..|+..-+.
T Consensus 2 ~~C~--~C~~~f~~~~~l~~H~~~h~~ 26 (57)
T 1bbo_A 2 YICE--ECGIRXKKPSMLKKHIRTHTD 26 (57)
T ss_dssp CBCT--TTCCBCSSHHHHHHHHHHTSS
T ss_pred CcCC--CCcCcCCCHHHHHHHHHhcCC
Confidence 7898 499999999999999987544
No 157
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=54.80 E-value=4.2 Score=28.03 Aligned_cols=26 Identities=19% Similarity=0.474 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.. |.|.|....-+..|+..-+.
T Consensus 10 ~~~C~~--C~k~f~~~~~l~~H~~~H~~ 35 (45)
T 2epq_A 10 PYSCPV--CGLRFKRKDRMSYHVRSHDG 35 (45)
T ss_dssp SSEETT--TTEECSCHHHHHHHHHHHSC
T ss_pred CCcCCC--CCcccCCHHHHHHHHHHccC
Confidence 689984 99999999999999976443
No 158
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.76 E-value=4.8 Score=27.72 Aligned_cols=25 Identities=24% Similarity=0.689 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eoe_A 12 PYKCNE--CGKVFTQNSHLANHQRIHT 36 (46)
T ss_dssp SSEETT--TTEECSSHHHHHHHHGGGS
T ss_pred CeECCC--cChhhCCHHHHHHHHHHcC
Confidence 689985 9999999999999997543
No 159
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.75 E-value=5.9 Score=27.41 Aligned_cols=23 Identities=30% Similarity=0.661 Sum_probs=20.6
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.. |.|.|.-..-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emz_A 12 PFKCNE--CGKGFGRRSHLAGHLRL 34 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 160
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.58 E-value=2.8 Score=28.74 Aligned_cols=26 Identities=27% Similarity=0.614 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|.....+..|+..-+.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~~ 37 (44)
T 2eox_A 12 SYNCNE--CGKAFTRIFHLTRHQKIHTR 37 (44)
T ss_dssp CEEETT--TTEEESSSHHHHTTHHHHCC
T ss_pred CeECcc--cCcccCCHHHHHHHHHHhCC
Confidence 589985 99999999999999876443
No 161
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=54.54 E-value=5.4 Score=27.61 Aligned_cols=25 Identities=28% Similarity=0.497 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ely_A 12 PFKCVE--CGKGFSRRSALNVHHKLHT 36 (46)
T ss_dssp SBCCSS--SCCCBSSTTHHHHHHHHHS
T ss_pred CcccCc--cCcccCCHHHHHHHHHHcC
Confidence 689985 9999999999999987633
No 162
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.53 E-value=4.2 Score=27.83 Aligned_cols=26 Identities=15% Similarity=0.611 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (44)
T 2yu5_A 12 PFKCSK--CDRVFTQRNYLVQHERTHAR 37 (44)
T ss_dssp SEECSS--SSCEESSSHHHHHHHHHCCC
T ss_pred CeECCC--CCchhCCHHHHHHHhHhcCC
Confidence 589984 99999999999999976443
No 163
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=54.49 E-value=7.8 Score=30.80 Aligned_cols=41 Identities=22% Similarity=0.413 Sum_probs=28.8
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++....+ ..|.|....|+|.|....-+..|+..-+.+
T Consensus 33 l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 73 (100)
T 2ebt_A 33 LKAHLRTHTGE---KPYKCTWEGCDWRFARSDELTRHYRKHTGA 73 (100)
T ss_dssp HHHHHHHHSCC---CCEECCSSSCCCEESSHHHHHHHHHHHTSC
T ss_pred HHHHHHHhCCC---CCeeCCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 44455554333 368997556999999999999998765543
No 164
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.45 E-value=6.4 Score=32.47 Aligned_cols=27 Identities=15% Similarity=0.221 Sum_probs=24.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |+|.|....-+.+|++..|..
T Consensus 80 ~~~C~~--C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 80 VLKCMY--CGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHHHTTTT
T ss_pred ceECCC--CCCccCCHHHHHHHHHHhCCc
Confidence 689985 999999999999999988765
No 165
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=54.10 E-value=9.5 Score=29.16 Aligned_cols=25 Identities=32% Similarity=0.693 Sum_probs=15.2
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|...+|+|.|....-+..|+..
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~ 55 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKV 55 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHH
Confidence 4666544566666666666666644
No 166
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.92 E-value=4.8 Score=27.78 Aligned_cols=26 Identities=27% Similarity=0.590 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ep2_A 12 PYECSI--CGKSFTKKSQLHVHQQIHTG 37 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHTTSS
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHhCC
Confidence 589985 99999999999999975433
No 167
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=53.91 E-value=9.2 Score=30.91 Aligned_cols=39 Identities=28% Similarity=0.469 Sum_probs=28.7
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++....+ ..|.|.+ |.|.|....-+..|+...+.+
T Consensus 33 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 71 (106)
T 2ee8_A 33 LLIHERTHTDE---RPYTCDI--CHKAFRRQDHLRDHRYIHSKE 71 (106)
T ss_dssp HHHHHHHHCCS---CCCBCSS--SCCBCSCHHHHHHHGGGSCCC
T ss_pred HHHHHHHcCCC---CCcCCCC--ccchhCCHHHHHHHHHHhCCC
Confidence 34455554443 3699985 999999999999999876654
No 168
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=53.83 E-value=7.2 Score=31.90 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=23.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |+|.|....-+.+|++..|..
T Consensus 69 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 95 (107)
T 1wjp_A 69 KLTCLE--CMRTFKSSFSIWRHQVEVHNQ 95 (107)
T ss_dssp GGEEGG--GTEECSSHHHHHHHHHHTSCC
T ss_pred CccCcc--ccchhCCHHHHHHHHHHHcCC
Confidence 689985 999999999999999877754
No 169
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=53.81 E-value=7.6 Score=29.59 Aligned_cols=39 Identities=28% Similarity=0.410 Sum_probs=28.6
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++....+ ..|.|.. |+|.|....-+..|+...+.+
T Consensus 17 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 55 (82)
T 2kmk_A 17 LSTHLLIHSDT---RPYPCQY--CGKRFHQKSDMKKHTFIHTGE 55 (82)
T ss_dssp HHHHHHHHHTC---CCEECSS--SCCEESSHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCC---CCeeCCc--CChhhCCHHHHHHHHHHhcCC
Confidence 44455554343 3689985 999999999999999865544
No 170
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=53.77 E-value=6 Score=29.32 Aligned_cols=25 Identities=20% Similarity=0.611 Sum_probs=22.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+...|
T Consensus 10 ~~~C~~--C~k~f~~~~~l~~H~~~~H 34 (66)
T 2drp_A 10 TYRCKV--CSRVYTHISNFCRHYVTSH 34 (66)
T ss_dssp EEECTT--TCCEESSHHHHHHHHHHHS
T ss_pred ceECCC--CcchhCCHHHHHHHHHHHc
Confidence 689984 9999999999999999877
No 171
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.75 E-value=4.7 Score=27.94 Aligned_cols=25 Identities=24% Similarity=0.632 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em2_A 12 PFKCKE--CGKAFRQNIHLASHLRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHC
T ss_pred CEECCc--CCchhCCHHHHHHHHHHhC
Confidence 689984 9999999999999987643
No 172
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=53.59 E-value=6.1 Score=31.30 Aligned_cols=39 Identities=23% Similarity=0.392 Sum_probs=28.4
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++....+ ..|.|.+ |+|.|....-+..|+...+.+
T Consensus 24 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 62 (96)
T 2dmd_A 24 LKTHMRCHTGV---KPYKCKT--CDYAAADSSSLNKHLRIHSDE 62 (96)
T ss_dssp HHHHGGGCCCC---CSEECSS--SCCEESSHHHHHHHHHHSCCC
T ss_pred HHHHHHhcCCC---CCEeCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 44455554333 3689984 999999999999999875554
No 173
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=53.54 E-value=4.8 Score=31.12 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=23.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.. |+|.|....-+..|+...|.+
T Consensus 47 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 47 AFVCSK--CGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSS--SCCEESCHHHHHHHHHHCCCC
T ss_pred ceECCC--CCChhCCHHHHHHHHHHccCC
Confidence 589985 999999999999999887765
No 174
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.51 E-value=4.9 Score=27.82 Aligned_cols=26 Identities=19% Similarity=0.487 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|....|+|.|....-+..|+..-
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~H 37 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRSH 37 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTTS
T ss_pred CeECCCCCCCCccCCHHHHHHHHHHh
Confidence 58997446999999999999998763
No 175
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.14 E-value=4.7 Score=27.91 Aligned_cols=23 Identities=39% Similarity=0.759 Sum_probs=20.9
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 12 PYGCNE--CGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CEEccc--cCcccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 176
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=53.08 E-value=7.4 Score=31.79 Aligned_cols=39 Identities=26% Similarity=0.451 Sum_probs=29.5
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++....+ ..|.|.+ |.|.|....-+..|+..-|.+
T Consensus 25 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 63 (110)
T 2csh_A 25 RDRHMSMHLGL---RPYGCGV--CGKKFKMKHHLVGHMKIHTGI 63 (110)
T ss_dssp HHHHHHHHSCC---CSEECTT--TSCEESSSHHHHHHHTTTCCC
T ss_pred HHHHHHHcCCC---cCccCCC--CCcccCCHHHHHHHHHHcCCC
Confidence 45566655444 3699985 999999999999999876654
No 177
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.03 E-value=5 Score=27.80 Aligned_cols=24 Identities=21% Similarity=0.736 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.. |+|.|.....+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eoy_A 12 CFKCNK--CEKTFSCSKYLTQHERIH 35 (46)
T ss_dssp CEECSS--SCCEESSSHHHHHHHTTC
T ss_pred CEECcC--CCCcCCCHHHHHHHHHHc
Confidence 589985 999999999999998753
No 178
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=52.95 E-value=5.6 Score=30.96 Aligned_cols=23 Identities=26% Similarity=0.648 Sum_probs=11.1
Q ss_pred cccCCCCccccccchhHHHHHhh
Q 007632 531 YGCGAKGCTKLFHAAEFVHKHLK 553 (595)
Q Consensus 531 ~rC~~~~CtKLFKg~EFV~KHI~ 553 (595)
|.|.+..|+|.|....-+..|+.
T Consensus 36 ~~C~~~~C~~~f~~~~~l~~H~~ 58 (89)
T 2wbs_A 36 YHCDWDGCGWKFARSDELTRHYR 58 (89)
T ss_dssp EECCSTTTCCEESSHHHHHHHHH
T ss_pred cCCCCCCCCCccCCHHHHHHHHH
Confidence 44543335555555555555543
No 179
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.82 E-value=4.1 Score=28.16 Aligned_cols=26 Identities=19% Similarity=0.604 Sum_probs=22.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ytg_A 12 PFKCGE--CGKSYNQRVHLTQHQRVHTG 37 (46)
T ss_dssp SEECTT--TCCEESSSHHHHTTGGGGSS
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcCC
Confidence 689985 99999999999999876433
No 180
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=52.65 E-value=6.3 Score=28.61 Aligned_cols=26 Identities=23% Similarity=0.575 Sum_probs=21.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|. .|+|.|....-+..|+..-+.
T Consensus 2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~ 27 (60)
T 2adr_A 2 SFVCE--VCTRAFARQEHLKRHYRSHTN 27 (60)
T ss_dssp CBCCT--TTCCCBSCHHHHHHHHHTTTS
T ss_pred cCcCC--CCccccCCHHHHHHHHHHhCC
Confidence 47898 499999999999999987443
No 181
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=52.58 E-value=7.7 Score=30.64 Aligned_cols=39 Identities=18% Similarity=0.312 Sum_probs=29.1
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++....+ ..|.|.+ |.|.|....-+..|+...|.+
T Consensus 23 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 61 (95)
T 2yt9_A 23 LNRHKLSHSGE---KPYSCPV--CGLRFKRKDRMSYHVRSHDGS 61 (95)
T ss_dssp HHHHHHHSCSS---CSEECSS--SCCEESCHHHHHHHHHHHCCC
T ss_pred HHHHHHhcCCC---CCCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 44455544333 3689985 999999999999999887764
No 182
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.40 E-value=5.1 Score=27.56 Aligned_cols=25 Identities=20% Similarity=0.365 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|. .|+|.|....-+..|+..-+
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2en8_A 12 SHTCD--ECGKNFCYISALRIHQRVHM 36 (46)
T ss_dssp SEECT--TTCCEESSHHHHHHHHTTTC
T ss_pred CeECC--CcCcccCCHHHHHHHHHHhC
Confidence 58998 49999999999999987533
No 183
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.76 E-value=5.1 Score=27.65 Aligned_cols=25 Identities=24% Similarity=0.619 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2en1_A 12 PFKCEE--CGKRFTQNSQLHSHQRVHT 36 (46)
T ss_dssp SEEETT--TTEEESSHHHHHHHGGGGS
T ss_pred CeeCCC--CCcccCCHHHHHHHHHHcC
Confidence 689984 9999999999999997643
No 184
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=51.61 E-value=8.1 Score=34.08 Aligned_cols=40 Identities=28% Similarity=0.440 Sum_probs=30.5
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChHH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E~ 559 (595)
|..+++..+.|+ .|.|.+ |+|.|.....+.+|++.-|++.
T Consensus 66 L~~H~~~H~~~k---~~~C~~--C~k~F~~~~~L~~H~~~hh~~~ 105 (133)
T 2lt7_A 66 RTKHEIHHTGER---RYQCLA--CGKSFINYQFMSSHIKSVHSQD 105 (133)
T ss_dssp HHHHHHHHHTCC---CEEESS--SCCEESSHHHHHHHHHHHTCCC
T ss_pred hhhhccccCCCc---cccCCC--CCCCcCCHHHHHHHhHHhcCCC
Confidence 344555444452 589985 9999999999999999999763
No 185
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.59 E-value=4.5 Score=27.93 Aligned_cols=25 Identities=24% Similarity=0.482 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ysp_A 12 PYKCEK--CGKGYNSKFNLDMHQKVHT 36 (46)
T ss_dssp SEEETT--TTEEESCHHHHHHHHTTSC
T ss_pred CeECCC--CCCccCCHHHHHHHHHhhC
Confidence 689984 9999999999999997633
No 186
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.31 E-value=5.5 Score=27.48 Aligned_cols=25 Identities=20% Similarity=0.380 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yso_A 12 SHQCRE--CGEIFFQYVSLIEHQVLHM 36 (46)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHHS
T ss_pred CEEccc--cChhhCCHHHHHHHHHHhC
Confidence 589985 9999999999999987633
No 187
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=51.03 E-value=12 Score=28.90 Aligned_cols=35 Identities=23% Similarity=0.491 Sum_probs=26.2
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
|..+++..+.+ ..|.|.. |+|.|....-+.+|++.
T Consensus 53 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 53 LTRHYRKHTGH---RPFQCQK--CDRAFSRSDHLALHMKR 87 (89)
T ss_dssp HHHHHHHHHCC---CCEECSS--SSCEESSHHHHHHHGGG
T ss_pred HHHHHHHcCCC---CCccCCC--CCcccCCHHHHHHHHHh
Confidence 44455544444 3699984 99999999999999874
No 188
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=49.85 E-value=7.8 Score=29.65 Aligned_cols=26 Identities=23% Similarity=0.393 Sum_probs=22.5
Q ss_pred cccCCCC-ccccccchhHHHHHhhhhC
Q 007632 531 YGCGAKG-CTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 531 ~rC~~~~-CtKLFKg~EFV~KHI~nKH 556 (595)
|.|...+ |+|.|+...-+.+|++.-|
T Consensus 59 ~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 59 YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 8898544 9999999999999998765
No 189
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=49.74 E-value=7.2 Score=35.42 Aligned_cols=34 Identities=21% Similarity=0.426 Sum_probs=29.7
Q ss_pred ccccCCCCccccccchhHHHHHhh-hhChHHHHHHHH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLK-LKHPELVIELTS 565 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~-nKH~E~V~ev~~ 565 (595)
.|.|.. |.|.|....-+..|++ ++|-..|..+..
T Consensus 50 pfyC~~--C~K~F~~~~~L~~H~rsK~HKrrvk~l~~ 84 (124)
T 1zr9_A 50 LHRCLA--CARYFIDSTNLKTHFRSKDHKKRLKQLSV 84 (124)
T ss_dssp CSEETT--TTEECSSHHHHHHHTTCHHHHHHHHHHTS
T ss_pred ceEccc--CcchhCCHHHHHHHHhhhhhhHHHHHhcc
Confidence 799984 9999999999999998 778888877753
No 190
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.42 E-value=6 Score=27.27 Aligned_cols=24 Identities=29% Similarity=0.776 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK 555 (595)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytd_A 12 PYKCSE--CGKAFHRHTHLNEHRRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHH
T ss_pred CeECCC--CCCeeCChHHHHHHHHHc
Confidence 589985 999999999999998753
No 191
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=49.34 E-value=7.2 Score=29.72 Aligned_cols=28 Identities=21% Similarity=0.393 Sum_probs=23.3
Q ss_pred CccccCCCCccccccchhHHHHHhhhhChH
Q 007632 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 529 ~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
..|.|.. |+|.|....-+..|+..-+.+
T Consensus 16 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~ 43 (74)
T 2lce_A 16 KPYKCDR--CQASFRYKGNLASHKTVHTGE 43 (74)
T ss_dssp CSBCCTT--SSCCBSCHHHHHHHHHHHCCC
T ss_pred CCeECCC--CCceeCCHHHHHHHHHHcCCC
Confidence 3699984 999999999999999765443
No 192
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=49.04 E-value=5.6 Score=27.96 Aligned_cols=26 Identities=19% Similarity=0.462 Sum_probs=22.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.. |+|.|.....+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (48)
T 2epr_A 12 QVACEI--CGKIFRDVYHLNRHKLSHSG 37 (48)
T ss_dssp SEEETT--TTEEESSHHHHHHHGGGSCS
T ss_pred CeeCCC--CCcccCCHHHHHHHHHhcCC
Confidence 689985 99999999999999876443
No 193
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=48.88 E-value=8.9 Score=29.82 Aligned_cols=38 Identities=16% Similarity=0.429 Sum_probs=28.0
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhCh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
|..+++....+ ..|.|.. |+|.|....-+..|+...+.
T Consensus 22 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 22 LTRHIRIHTGQ---KPFQCRI--CMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCC---CCccCCC--CCcccCCHHHHHHHHHHcCC
Confidence 44555554444 3689985 99999999999999986544
No 194
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=48.52 E-value=11 Score=30.85 Aligned_cols=37 Identities=16% Similarity=0.425 Sum_probs=22.9
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhC
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
|..+++....+ ..|.|.+ |+|.|....-+..|+..-+
T Consensus 54 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~ 90 (119)
T 2jp9_A 54 LKRHQRRHTGV---KPFQCKT--CQRKFSRSDHLKTHTRTHT 90 (119)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC---CCccCCc--cCchhCCHHHHHHHHHHhc
Confidence 44555554333 2577764 7777777777777776433
No 195
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.37 E-value=6.4 Score=27.13 Aligned_cols=23 Identities=22% Similarity=0.420 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2enc_A 12 PFKCEE--CGKGFYTNSQCYSHQRS 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCCcCCChHHHHHHHHH
Confidence 589984 99999999999999875
No 196
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.35 E-value=6.1 Score=27.16 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=20.8
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2epw_A 12 PCKCTE--CGKAFCWKSQLIMHQRT 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHHHH
T ss_pred CeeCCC--CCCccCCHHHHHHHHHH
Confidence 589985 99999999999999976
No 197
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.34 E-value=5 Score=27.04 Aligned_cols=23 Identities=22% Similarity=0.563 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|. .|+|.|....-+..|+..
T Consensus 11 ~~~C~--~C~k~f~~~~~L~~H~~~ 33 (42)
T 2en2_A 11 PYKCE--TCGARFVQVAHLRAHVLI 33 (42)
T ss_dssp SEECT--TTCCEESSHHHHHHHTHH
T ss_pred CEeCC--CcChhhCCHHHHHHHHHH
Confidence 58998 599999999999999874
No 198
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.12 E-value=5.3 Score=27.64 Aligned_cols=23 Identities=22% Similarity=0.414 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em8_A 12 PYKCVE--CGKGYKRRLDLDFHQRV 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CeECcc--cCchhCCHHHHHHHHHH
Confidence 689984 99999999999999875
No 199
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=48.06 E-value=16 Score=28.69 Aligned_cols=28 Identities=18% Similarity=0.334 Sum_probs=25.5
Q ss_pred CccccCCCCccccccchhHHHHHhhhhC
Q 007632 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 529 ~K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
..|.|.-.+|+..|+...=+..||+.+|
T Consensus 37 ~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 37 EPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 3699998999999999999999999988
No 200
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=47.53 E-value=15 Score=29.93 Aligned_cols=37 Identities=22% Similarity=0.425 Sum_probs=27.3
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
|..+++..+.+ ..|.|....|+|.|....-+.+|+..
T Consensus 82 l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~ 118 (119)
T 2jp9_A 82 LKTHTRTHTGE---KPFSCRWPSCQKKFARSDELVRHHNM 118 (119)
T ss_dssp HHHHHHHHHTC---CCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred HHHHHHHhcCC---CCeeCCCCCCccccCCHHHHHHHHhc
Confidence 44566555444 25899544699999999999999864
No 201
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=47.52 E-value=7.3 Score=29.38 Aligned_cols=27 Identities=11% Similarity=0.308 Sum_probs=22.9
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |+|.|....-+..|+..-+.+
T Consensus 9 ~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 35 (70)
T 1x5w_A 9 PEKCSE--CSYSCSSKAALRIHERIHCTD 35 (70)
T ss_dssp SEECSS--SSCEESSHHHHHHHHGGGCCS
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcCCC
Confidence 689985 999999999999999874433
No 202
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=46.48 E-value=7.6 Score=29.96 Aligned_cols=27 Identities=30% Similarity=0.684 Sum_probs=24.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |.|.|....-+..|+...|.+
T Consensus 15 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~ 41 (86)
T 1x6h_A 15 PYACSH--CDKTFRQKQLLDMHFKRYHDP 41 (86)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred CCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 589985 999999999999999988865
No 203
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=46.22 E-value=7.2 Score=29.65 Aligned_cols=26 Identities=27% Similarity=0.664 Sum_probs=22.3
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |.|.|....-+..|+..-+.
T Consensus 14 ~~~C~~--C~k~f~~~~~L~~H~~~h~~ 39 (72)
T 1x6e_A 14 PYGCVE--CGKAFSRSSILVQHQRVHTG 39 (72)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHGGGC
T ss_pred CccCCC--CCCccCCHHHHHHHHHhcCC
Confidence 689985 99999999999999986443
No 204
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=46.07 E-value=7.1 Score=32.31 Aligned_cols=27 Identities=26% Similarity=0.450 Sum_probs=23.8
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+ |+|.|....-+.+|++.-|.+
T Consensus 28 ~h~C~~--Cgk~F~~~~~L~~H~~~H~~~ 54 (85)
T 2lv2_A 28 CHLCPV--CGESFASKGAQERHLRLLHAA 54 (85)
T ss_dssp TEECTT--SCCEESSHHHHHHHHHTTSCS
T ss_pred CEECCC--CCCCcCcHHHHhhhhhhccCC
Confidence 689985 999999999999999876655
No 205
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=44.00 E-value=12 Score=29.80 Aligned_cols=27 Identities=26% Similarity=0.424 Sum_probs=23.0
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
-|.|. .|.|.|.-...+.+|++.-+.+
T Consensus 13 py~C~--~CgK~F~~~s~L~~H~r~Htg~ 39 (66)
T 2epp_A 13 ILPCG--LCGKVFTDANRLRQHEAQHGVT 39 (66)
T ss_dssp CCCCT--TTCCCCSCHHHHHHHHHHHTTT
T ss_pred CcCCC--CCCCccCCHHHHHhhhhhhCCC
Confidence 58998 5999999999999999875543
No 206
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=43.92 E-value=11 Score=31.14 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=27.5
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhCh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
|..+++....+ ..|.|.+..|+|.|....-+..|+..-+.
T Consensus 50 l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 89 (124)
T 1ubd_C 50 LKRHQLVHTGE---KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89 (124)
T ss_dssp HHHHGGGTSCC---CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCC---CCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 33444444333 36889766799999999999999875443
No 207
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=43.86 E-value=14 Score=32.02 Aligned_cols=40 Identities=25% Similarity=0.401 Sum_probs=29.4
Q ss_pred hhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 516 DPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 516 e~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
..+++..+.+ ..|.|.+..|+|.|....-+..|+..-+.+
T Consensus 79 ~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~ 118 (155)
T 2rpc_A 79 VNHIRVHTGE---KPFPCPFPGCGKIFARSENLKIHKRTHTGE 118 (155)
T ss_dssp HHHTHHHHCC---CSEECSCTTTCCEESCHHHHHHHHTTTCSS
T ss_pred HHHHHhcCCC---CcccCCcCCCCCccCCHHHHHHHHHhhCCC
Confidence 3344444333 368998667999999999999999866554
No 208
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.50 E-value=6.3 Score=27.15 Aligned_cols=23 Identities=26% Similarity=0.749 Sum_probs=20.5
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yu8_A 12 PYKCNE--CGKVFTQNSHLARHRRV 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHTHH
T ss_pred CeECCc--CCchhCCHHHHHHHHHh
Confidence 589985 99999999999999864
No 209
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.51 E-value=13 Score=29.26 Aligned_cols=27 Identities=15% Similarity=0.304 Sum_probs=21.2
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
++.|. .|+|.|....-+..|+...|..
T Consensus 25 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~ 51 (95)
T 2ej4_A 25 SRPKK--SCDRTFSTMHELVTHVTMEHVG 51 (95)
T ss_dssp SSSCC--CCCCCCSSHHHHHHHHHHTTTC
T ss_pred CCccc--ccccccCCHHHHHHHHHHhccC
Confidence 45576 5999999999999998876754
No 210
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=42.14 E-value=2.5 Score=27.31 Aligned_cols=22 Identities=32% Similarity=0.768 Sum_probs=18.9
Q ss_pred cccCCCCccccccchhHHHHHhhh
Q 007632 531 YGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 531 ~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
|.|. .|+|.|.....+..|+..
T Consensus 3 ~~C~--~C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 3 FACP--ACPKRFMRSDALSKHIKT 24 (32)
T ss_dssp SSSS--SSCTTHHHHHTTSSSTTS
T ss_pred CCCC--CCCcccCCHHHHHHHHHH
Confidence 7898 599999999999999865
No 211
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=41.78 E-value=23 Score=36.61 Aligned_cols=49 Identities=20% Similarity=0.249 Sum_probs=40.8
Q ss_pred CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHH
Q 007632 224 GLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWL 273 (595)
Q Consensus 224 ~lmsFKqFl~~~~D~Itp~eA~~rY~eYK~ef~~~q~~~FF~~HK~eeWF 273 (595)
..+=||||+.+++-.+|-+||...-..==..|.++|+ ++|....+-.||
T Consensus 247 ~aIGYkE~~~yL~G~~s~~eai~~~~~~TR~yAKRQ~-TWfR~~~~~~w~ 295 (316)
T 3foz_A 247 RCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQI-TWLRGWEGVHWL 295 (316)
T ss_dssp TSTTHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHSCSSCEEE
T ss_pred eeeehhhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCeEe
Confidence 5577999999999999999998877766677888886 588877777787
No 212
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=39.64 E-value=18 Score=32.47 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=27.2
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhChH
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
|..+++..+.+ -.|.|.+ |+|.|....-+.+|+..-|++
T Consensus 149 L~~H~~~H~~~---~~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 187 (190)
T 2i13_A 149 LHTHQRTHTGE---KPYKCPE--CGKSFSRRDALNVHQRTHTGK 187 (190)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESSHHHHHHHHTTC---
T ss_pred HHHHHHhcCCC---CCeECCC--CCCccCCHHHHHHHHHhcCCC
Confidence 45566665544 2688984 999999999999999876554
No 213
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=39.38 E-value=22 Score=30.48 Aligned_cols=41 Identities=32% Similarity=0.485 Sum_probs=27.7
Q ss_pred hhhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhCh
Q 007632 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 514 ~le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|..+++..+.+ ..|.|.+.+|+|.|....-+.+|+...|.
T Consensus 84 ~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 84 NLKTHLRSHTGE---KPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp HHHHHHHHTTTC---CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred HHHHHHHHcCCC---CCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 355566554443 25788755688888888888888866664
No 214
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=38.63 E-value=14 Score=31.80 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=26.7
Q ss_pred CccccCCCCccccccchhHHHHHhhhhChHHHHHHHHh
Q 007632 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSK 566 (595)
Q Consensus 529 ~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E~V~ev~~k 566 (595)
+...|. .|+|.||. +.+|+.+.|.---++-+++
T Consensus 20 d~iiCl--ecGK~fK~---LkRHL~~~hgltpeeYR~k 52 (87)
T 2jsp_A 20 DHIVCL--ECGGSFKS---LKRHLTTHHSMTPEEYREK 52 (87)
T ss_dssp SCEECT--BTCCEESB---HHHHHHHTTCSCHHHHHHH
T ss_pred CceEec--ccchhhHH---HHHHHHHccCCCHHHHHHH
Confidence 578997 69999996 8899999998766666553
No 215
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=38.58 E-value=13 Score=28.42 Aligned_cols=27 Identities=26% Similarity=0.524 Sum_probs=22.7
Q ss_pred CccccCCCCccccccchhHHHHHhhhhCh
Q 007632 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 529 ~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
-.|.|.+ |+|.|....-+..|+..-+.
T Consensus 17 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~ 43 (77)
T 2cot_A 17 RRYKCDE--CGKSFSHSSDLSKHRRTHTG 43 (77)
T ss_dssp CSSBCSS--SCCBCSCHHHHHHHHTTTCC
T ss_pred CCEECCC--CCcccCCHHHHHHHHHHcCC
Confidence 3689985 99999999999999986443
No 216
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=38.57 E-value=16 Score=31.15 Aligned_cols=26 Identities=27% Similarity=0.434 Sum_probs=19.3
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|. .|+|.|+...-+..|+...|.
T Consensus 50 pf~C~--~Cgk~F~~~~~L~~H~~r~Ht 75 (102)
T 2ghf_A 50 SYVCV--ECNFLTKRYDALSEHNLKYHP 75 (102)
T ss_dssp CEEET--TTTEEESSTHHHHTHHHHTST
T ss_pred CcCCC--CCCcccCCHHHHHHHHHHhcC
Confidence 47887 488888888888888544554
No 217
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.97 E-value=13 Score=28.54 Aligned_cols=26 Identities=12% Similarity=0.179 Sum_probs=22.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhCh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|.|.+ |+|.|.....+..|+..-+.
T Consensus 7 ~~~C~~--C~k~f~~~~~L~~H~~~h~~ 32 (78)
T 2d9h_A 7 GLQCEI--CGFTCRQKASLNWHQRKHAE 32 (78)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHHH
T ss_pred CeECCC--CCCeeCCHHHHHHHHHHhhc
Confidence 689985 99999999999999976554
No 218
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=37.38 E-value=16 Score=26.27 Aligned_cols=25 Identities=28% Similarity=0.491 Sum_probs=21.7
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
|--|. .|-|++..-.-+.|||+--|
T Consensus 9 kqhcr--fckkkysdvknlikhire~h 33 (37)
T 2elu_A 9 KQHCR--FCKKKYSDVKNLIKHIRDAH 33 (37)
T ss_dssp CCEET--TTTEECSSHHHHHHHHHHTT
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHhc
Confidence 55787 59999999999999998766
No 219
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=37.27 E-value=27 Score=28.52 Aligned_cols=28 Identities=18% Similarity=0.371 Sum_probs=21.6
Q ss_pred CccccCCCCccccccchhHHHHHhhhhChH
Q 007632 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 529 ~K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
..|.|.+ |+|.|....-+..|+..-+.+
T Consensus 65 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 92 (124)
T 2dlq_A 65 QVFTCSV--CQETFRRRMELRLHMVSHTGE 92 (124)
T ss_dssp CCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred CCeECCC--CCCccCCHHHHHHHHHHcCCC
Confidence 4688874 888888888888888765554
No 220
>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}
Probab=36.77 E-value=12 Score=32.60 Aligned_cols=26 Identities=35% Similarity=0.561 Sum_probs=20.5
Q ss_pred ccCCCCccccccchhHHHHHhhhhCh
Q 007632 532 GCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 532 rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
.|..+||.+.|....-..||+..-|.
T Consensus 14 ~CkWPGCe~~~ed~~~FlkHL~~eH~ 39 (93)
T 4i1l_A 14 VCKWPGCEKVFEEPEEFLKHCQADHL 39 (93)
T ss_dssp ----CCSTTTTHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCcccCHHHHHHHhhcccC
Confidence 69999999999999999999998885
No 221
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.46 E-value=22 Score=27.94 Aligned_cols=22 Identities=23% Similarity=0.303 Sum_probs=20.0
Q ss_pred cccCCCCccccccchhHHHHHhhh
Q 007632 531 YGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 531 ~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
|.|. .|+|.|....-+..|+..
T Consensus 63 ~~C~--~C~k~f~~~~~L~~H~~~ 84 (95)
T 2ej4_A 63 EECP--REGKSFKAKYKLVNHIRV 84 (95)
T ss_dssp TTCS--STTCCCSSHHHHHHHHHH
T ss_pred cCCC--CCCcccCCHHHHHHHHHh
Confidence 7898 499999999999999975
No 222
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=35.37 E-value=25 Score=28.97 Aligned_cols=24 Identities=21% Similarity=0.365 Sum_probs=21.1
Q ss_pred ccccCCCCccccc-cchhHHHHHhhhh
Q 007632 530 KYGCGAKGCTKLF-HAAEFVHKHLKLK 555 (595)
Q Consensus 530 K~rC~~~~CtKLF-Kg~EFV~KHI~nK 555 (595)
.|.|.. |+|.| ....-+..|+..-
T Consensus 34 ~~~C~~--C~k~F~~~~~~L~~H~~~h 58 (96)
T 2ctd_A 34 SVSCPT--CQAVGRKTIEGLKKHMENC 58 (96)
T ss_dssp CEECTT--TCSCEESSHHHHHHHHHHH
T ss_pred CcCCCC--CCCCcccCHHHHHHHHHHH
Confidence 689984 99999 9999999999763
No 223
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=31.49 E-value=22 Score=28.19 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=24.1
Q ss_pred ccccCCCCccccccchhHHHHHhhhh-ChHHHH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLK-HPELVI 561 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nK-H~E~V~ 561 (595)
+-.|.+ |+++|-+.-=|+-|||.| |=++|.
T Consensus 13 ~~eC~l--C~vkYs~r~slqDHIFs~qHI~~vk 43 (55)
T 2yrk_A 13 KPECTL--CGVKYSARLSIRDHIFSKQHISKVR 43 (55)
T ss_dssp CSCCTT--TTCCCCSSSCHHHHHTSHHHHHHHH
T ss_pred Cccccc--cCcccccccchhhhhccHHHHHHHH
Confidence 458985 999999999999999955 555554
No 224
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=30.40 E-value=14 Score=28.99 Aligned_cols=25 Identities=16% Similarity=0.611 Sum_probs=21.5
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|.. |+|.|....-+..|+..-+
T Consensus 3 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 27 (88)
T 1llm_C 3 PFQCRI--CMRNFSRSDHLTTHIRTHT 27 (88)
T ss_dssp CEECTT--TCCEESCHHHHHHHHHHHH
T ss_pred CCcCCC--CCCccCCHHHHHHHHHHcC
Confidence 588985 9999999999999997633
No 225
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=30.08 E-value=31 Score=30.90 Aligned_cols=29 Identities=21% Similarity=0.355 Sum_probs=21.6
Q ss_pred ccccCCCCccccccchhHHHHHhhhhChH
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH~E 558 (595)
.|.|.+..|+|.|....-+..|+..-+.+
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 132 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGGGSSS
T ss_pred eeeCCCCCCccccCCHHHHHHHHHHhCCC
Confidence 68884446888888888888888765443
No 226
>3iax_B Colicin-A; TOLB, TOLB BOX, complex, protein transport, trans antibiotic, antimicrobial, bacteriocin, cell membrane, MEMB transmembrane; 2.60A {Citrobacter freundii}
Probab=29.72 E-value=51 Score=28.97 Aligned_cols=20 Identities=35% Similarity=0.571 Sum_probs=9.9
Q ss_pred CCCCCCCCCCCCCCCCCCCC
Q 007632 175 GGRPGYGDERPHGRFAGRSS 194 (595)
Q Consensus 175 gg~~~~~~~~~~g~~~~r~~ 194 (595)
|-+.+|..++.-|..++-++
T Consensus 10 gdgt~wsserg~gp~pggg~ 29 (115)
T 3iax_B 10 GDGTGWSSERGSGPEPGGGS 29 (115)
T ss_pred cCCCcccccCCCCCCCCCCC
Confidence 33455555555555444443
No 227
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=29.51 E-value=1.1e+02 Score=31.58 Aligned_cols=50 Identities=18% Similarity=0.396 Sum_probs=41.4
Q ss_pred CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHh
Q 007632 224 GLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLK 274 (595)
Q Consensus 224 ~lmsFKqFl~~~~D~Itp~eA~~rY~eYK~ef~~~q~~~FF~~HK~eeWFr 274 (595)
..+=||||+.++.-.+|-+||...-..==..|.++|+ ++|....+-.||-
T Consensus 239 ~aIGYkE~~~yL~G~~sl~eaie~i~~~TR~yAKRQ~-TWfR~~~~~~w~~ 288 (322)
T 3exa_A 239 QAIGYKEMYDYLDGNVTLEEAIDTLKRNSRRYAKRQL-TWFRNKANVTWFD 288 (322)
T ss_dssp GSTTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHTSTTEEEEE
T ss_pred eeeeHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH-HHhcCCCCCeEeC
Confidence 4577999999999999999998877666677888886 5888888888884
No 228
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=28.38 E-value=24 Score=24.69 Aligned_cols=21 Identities=19% Similarity=0.466 Sum_probs=19.1
Q ss_pred ccccCCCCccccccchhHHHHHh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHL 552 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI 552 (595)
-|.|. .|+|-|.-..-+.+|+
T Consensus 8 p~~C~--~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCL--PCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEET--TTTEECSCHHHHHHHH
T ss_pred CeECC--CCCCccCCHhHccCcC
Confidence 58898 5999999999999998
No 229
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=27.67 E-value=26 Score=26.96 Aligned_cols=23 Identities=22% Similarity=0.488 Sum_probs=20.4
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
-|.|.. |+|.|....-+..|+..
T Consensus 4 py~C~~--C~k~F~~~~~L~~H~~~ 26 (60)
T 4gzn_C 4 PFFCNF--CGKTYRDASGLSRHRRA 26 (60)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHH
T ss_pred CccCCC--CCCEeCCHHHHHHHHHH
Confidence 589984 99999999999999864
No 230
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.24 E-value=20 Score=26.76 Aligned_cols=22 Identities=27% Similarity=0.394 Sum_probs=13.8
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|. .|+|.|. ..-+..|+..
T Consensus 10 ~~~C~--~C~k~f~-~~~L~~H~~~ 31 (66)
T 2eod_A 10 TQPCT--YCTKEFV-FDTIQSHQYQ 31 (66)
T ss_dssp EEECS--SSCCEEE-HHHHHHHHHH
T ss_pred Ceecc--ccCCccC-HHHHHHHHHH
Confidence 45665 3667776 6666666654
No 231
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=26.70 E-value=50 Score=29.49 Aligned_cols=40 Identities=23% Similarity=0.394 Sum_probs=25.4
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhCh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
|..+++....+ ..|.|....|+|.|....-+..|+...|.
T Consensus 60 l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~~h~ 99 (190)
T 1tf6_A 60 LTRHSLTHTGE---KNFTCDSDGCDLRFTTKANMKKHFNRFHN 99 (190)
T ss_dssp HHHHHTTTTTC---CCEECCSSSCCCEESCHHHHHHHHHTTSS
T ss_pred HHHHHHHccCC---CceeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 44555544333 25777644577888777777777776674
No 232
>2kw6_A Cyclin-dependent kinase 2-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=26.18 E-value=26 Score=28.61 Aligned_cols=19 Identities=37% Similarity=0.483 Sum_probs=16.7
Q ss_pred CChhhHHHhHHHHHHHHHH
Q 007632 366 SEPRRIQVDIEQAQALVRK 384 (595)
Q Consensus 366 S~p~RI~~DLeqA~~Lv~k 384 (595)
+..+||++||.+|+.||+-
T Consensus 36 ~~~ERLkR~I~hAr~LVrE 54 (65)
T 2kw6_A 36 SAMERLKRGIIHARGLVRE 54 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 3568999999999999974
No 233
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=25.61 E-value=32 Score=30.73 Aligned_cols=38 Identities=26% Similarity=0.446 Sum_probs=26.9
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhhhCh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~nKH~ 557 (595)
|..+++..+.+ ..|.|.+ |+|.|....-+.+|+..-+.
T Consensus 121 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 121 LRAHQRTHTGE---KPYKCPE--CGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCC---CCeECCC--CCcccCCHHHHHHHHHhcCC
Confidence 44455554444 3688984 99999999999999876443
No 234
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.03 E-value=33 Score=28.18 Aligned_cols=23 Identities=22% Similarity=0.612 Sum_probs=20.7
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.+ |+|.|.....+..|+..
T Consensus 25 py~C~~--C~k~F~~~~~L~~H~~~ 47 (88)
T 1x6f_A 25 TYQCKH--CDSKLQSTAELTSHLNI 47 (88)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CCcCCC--CCCEeCCHHHHHHHHHH
Confidence 589984 99999999999999875
No 235
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=23.84 E-value=46 Score=29.16 Aligned_cols=35 Identities=37% Similarity=0.462 Sum_probs=26.5
Q ss_pred hhhHHHhhhhcccCCccccCCCCccccccchhHHHHHhhh
Q 007632 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
|..+++..+.|+ .|.|. .|+|.|.....+..|+..
T Consensus 38 L~~H~~~H~~~k---~~~C~--~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 38 LRRHFNIHSWEK---KYPCR--YCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp HHHHHHHHHCCS---CEECS--SSSCEESSHHHHHHHHHH
T ss_pred HHHHHHHcCCCC---CeeCC--ccCeecccccchhhhccc
Confidence 455666555552 68998 499999999999999864
No 236
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=23.43 E-value=1.4e+02 Score=30.65 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=39.5
Q ss_pred CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHh
Q 007632 224 GLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLK 274 (595)
Q Consensus 224 ~lmsFKqFl~~~~D~Itp~eA~~rY~eYK~ef~~~q~~~FF~~HK~eeWFr 274 (595)
..+=||||+.++.-.++-+||...-..==..|.++|+ ++|....+-.||-
T Consensus 253 ~aIGyke~~~yl~g~~~~~eai~~~~~~Tr~yAKRQ~-TWfr~~~~~~w~~ 302 (323)
T 3crm_A 253 RAVGYRQVWDYLDGKLSYAEMTERGIIATRQLAKRQF-TWLRSWSHLHWMD 302 (323)
T ss_dssp GSTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH-HHHHTCSSCEEEE
T ss_pred heecHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCeEec
Confidence 4578999999999999999998876665666777775 5777767777875
No 237
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.39 E-value=42 Score=24.94 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=25.2
Q ss_pred hhhHHHhhhhcccCCccccC-CCCccccccchhHHHHHhhh
Q 007632 515 LDPFVRKIRDEKYGWKYGCG-AKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 515 le~~Vkk~~dE~~g~K~rC~-~~~CtKLFKg~EFV~KHI~n 554 (595)
|..+++. +.+ --|.|. . |+|.|....-+..|+.+
T Consensus 25 L~~H~~~-~~~---~p~~C~~~--C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 25 IQSHQYQ-CPR---LPVACPNQ--CGVGTVAREDLPGHLKD 59 (66)
T ss_dssp HHHHHHH-CSS---SEEECTTC--CSCCEEETTTHHHHHHT
T ss_pred HHHHHHH-cCC---cCccCCcc--cCcccccHHHHHHHHHh
Confidence 4445443 344 368997 5 99999999999999875
No 238
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=22.70 E-value=36 Score=28.51 Aligned_cols=23 Identities=17% Similarity=0.554 Sum_probs=21.0
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.. |+|.|....-+..|+..
T Consensus 74 ~~~C~~--C~k~f~~~~~l~~H~~~ 96 (129)
T 2wbt_A 74 QFVCPL--CLMPFSSSVSLKQHIRY 96 (129)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHhHHHHHHHH
Confidence 699985 99999999999999976
No 239
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.07 E-value=38 Score=27.63 Aligned_cols=23 Identities=17% Similarity=0.507 Sum_probs=21.1
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|. .|+|.|....-+..|+..
T Consensus 19 ~~~C~--~C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 19 KFRCK--DCSAAYDTLVELTVHMNE 41 (115)
T ss_dssp SEEBS--SSSCEESSHHHHHHHHHH
T ss_pred CEECC--ccCchhcCHHHHHHHHHH
Confidence 69998 499999999999999986
No 240
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=21.72 E-value=76 Score=26.61 Aligned_cols=35 Identities=31% Similarity=0.478 Sum_probs=26.1
Q ss_pred ccccCCCCccccc-cchhHH-HHHhh-hhChHHHHHHHHh
Q 007632 530 KYGCGAKGCTKLF-HAAEFV-HKHLK-LKHPELVIELTSK 566 (595)
Q Consensus 530 K~rC~~~~CtKLF-Kg~EFV-~KHI~-nKH~E~V~ev~~k 566 (595)
||-|. .|.+-| +..-.| ++|+. .||-+.|..--.+
T Consensus 3 kYyCd--YCd~~lt~Ds~s~Rk~H~~G~kH~~nv~~yy~~ 40 (77)
T 3cw1_L 3 KFYCD--YCDTYLTHDSPSVRKTHCSGRKHKENVKDYYCK 40 (77)
T ss_pred Ccccc--cCCceecCCCHHHHHHHHccHHHHHHHHHHHHH
Confidence 78998 599998 787886 57887 7888766554443
No 241
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.92 E-value=33 Score=29.15 Aligned_cols=25 Identities=24% Similarity=0.388 Sum_probs=21.4
Q ss_pred ccccCCCCccccccchhHHHHHhhhhC
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~nKH 556 (595)
.|.|. .|+|.|....-+..|+...|
T Consensus 18 py~C~--~Cgk~F~~~~~L~~H~r~~H 42 (102)
T 2ghf_A 18 GYECK--YCTFQTPDLNMFTFHVDSEH 42 (102)
T ss_dssp SEECS--SCSCEESCHHHHHHHHHHHC
T ss_pred CcCCC--CCCCccCCHHHHHHHHHhhC
Confidence 48998 59999999999999987544
No 242
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.86 E-value=49 Score=26.74 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=18.7
Q ss_pred ccccCCCCccccccchhHHHHHhhh
Q 007632 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (595)
Q Consensus 530 K~rC~~~~CtKLFKg~EFV~KHI~n 554 (595)
.|.|.. |.|.|....-+..|+..
T Consensus 16 ~~~C~~--C~~~f~~~~~l~~H~~~ 38 (107)
T 1wjp_A 16 VYQCRL--CNAKLSSLLEQGSHERL 38 (107)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHH
T ss_pred CeECCC--CCCccCCHHHHHHHHHH
Confidence 588874 88888888888888865
No 243
>2m1l_A Cyclin-dependent kinase 2-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Homo sapiens}
Probab=20.67 E-value=39 Score=27.91 Aligned_cols=19 Identities=42% Similarity=0.517 Sum_probs=16.9
Q ss_pred CChhhHHHhHHHHHHHHHH
Q 007632 366 SEPRRIQVDIEQAQALVRK 384 (595)
Q Consensus 366 S~p~RI~~DLeqA~~Lv~k 384 (595)
+..+||++||.+|+.||+-
T Consensus 40 s~~ERLkRgI~hAr~LVRE 58 (69)
T 2m1l_A 40 SAMERLKRGIIHARALVRE 58 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 4678999999999999984
Done!