BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007633
(595 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 160/558 (28%), Positives = 263/558 (47%), Gaps = 62/558 (11%)
Query: 34 YDWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLD-EPLLLTWNGVQ 92
Y W + Y+ +P ++ V+GINGQFPGP + L E +++ W+G+
Sbjct: 6 YKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGIL 65
Query: 93 HRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXXNNR 151
R W DG + C I G + Y F V D G+FFY L QR+A +
Sbjct: 66 QRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPP 124
Query: 152 DVIPLPFAVPDGDITIFISDWYTKS-HKKLRKDVENGVD-LGVPDGILINGLGPY----- 204
PF DG+I + +SDW+ +S HK+ + +G P IL+NG G +
Sbjct: 125 QGKKEPFHY-DGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIA 183
Query: 205 -RYDAAIVPDGI-------PYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETE 256
+YD+ + P + PY + +V P KTYR+R+ + +LNF I NH LL+VE +
Sbjct: 184 AKYDSNLEPCKLKGSESCAPY-IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEAD 242
Query: 257 GSYTVQQNYT-NMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHY 315
G+Y VQ YT ++DI+ G+S+S L+TTDQN S +Y++ R + N G+ +L+Y
Sbjct: 243 GNY-VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR---ARHPNTPPGLTLLNY 298
Query: 316 ---SNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDV 372
S S P S P P A+D + +++++ + ++A P P F +
Sbjct: 299 LPNSVSKLPTSPPPQTP--AWDDF---DRSKNFTYRITAAMGSPKPPVKF--------NR 345
Query: 373 YVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVD- 431
+ L +I G + +N +S P TP + A ++N+ A+ + P ++ +D
Sbjct: 346 RIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDT 405
Query: 432 ------TSLINGTYK----GFMEIIFQN------NDTTVQSYHMDGYAFFVVGMDFGVWT 475
T + NG Y+ +++I QN N + +H+ G+ F+V+G G ++
Sbjct: 406 PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFS 465
Query: 476 ENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVIN 535
+ N + R+T +FP WTAI DN G+W ++G + V+
Sbjct: 466 AEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMG----MGVVF 521
Query: 536 PEIDKSAPLLPDNAIYCG 553
E + +P A+ CG
Sbjct: 522 AEGVEKVGRIPTKALACG 539
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 185/499 (37%), Gaps = 69/499 (13%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D TIS SP G +Q I +N FP P++ ++ +L W+
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G +W DG N CPI G + Y FQV DQ G+F+Y L Q
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ D + V D I ++DWY + K G + D LINGLG R
Sbjct: 127 YDPNDPHASLYDVDDDSTVITLADWYHLAAKV-------GAPVPTADATLINGLG--RSA 177
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
A + D +I V GK YR R+ ++ + F I H+L ++E + +
Sbjct: 178 ATLAAD---LAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDS 234
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGV--AILHYSNSLGPASGP 325
+ I Q +SF++ DQ+ +Y+I A P NS N G AIL Y G
Sbjct: 235 LQIFAAQRYSFVLNADQDV-DNYWIRALP---NSGTQNFAGGTNSAILRY-------DGA 283
Query: 326 LPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEG 385
P P T S N G A P G T V + LN G
Sbjct: 284 APVEPTTSQTP-STNPLVESALTTLKGTAAP--------GSPTPGGVDLALNMAFGFAGG 334
Query: 386 KWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFP----YKLMSRAPKVDTSL-INGTYK 440
+ T+NG S+ PP+ P++L A L P Y L + A ++ SL
Sbjct: 335 NF--TINGASFTPPTVPVLLQILSGAQSAADL-LPAGSVYSLPANA-DIEISLPATAAAP 390
Query: 441 GFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV-FPGA 499
GF +H+ G+ F VV TYN + V R PG
Sbjct: 391 GFP-----------HPFHLHGHVFAVV-------RSAGSSTYNYANPVYRDVVSTGAPGD 432
Query: 500 WTAILVYLDNAGIWNLRAE 518
I DN G W L
Sbjct: 433 NVTIRFRTDNPGPWFLHCH 451
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 185/499 (37%), Gaps = 69/499 (13%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D TIS SP G +Q I +N FP P++ ++ +L W+
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G +W DG N CPI G + Y FQV DQ G+F+Y L Q
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ D + V D I ++DWY + K G + D LINGLG R
Sbjct: 127 YDPNDPHASLYDVDDDSTVITLADWYHLAAKV-------GAPVPTADATLINGLG--RSA 177
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
A + D +I V GK YR R+ ++ + F I H+L ++E + +
Sbjct: 178 ATLAAD---LAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDS 234
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGV--AILHYSNSLGPASGP 325
+ I Q +SF++ DQ+ +Y+I A P NS N G AIL Y G
Sbjct: 235 LQIFAAQRYSFVLNADQDV-DNYWIRALP---NSGTQNFAGGTNSAILRY-------DGA 283
Query: 326 LPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEG 385
P P T S N G A P G T V + LN G
Sbjct: 284 APVEPTTSQTP-STNPLVESALTTLKGTAAP--------GSPTPGGVDLALNMAFGFAGG 334
Query: 386 KWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFP----YKLMSRAPKVDTSL-INGTYK 440
+ T+NG S+ PP+ P++L A L P Y L + A ++ SL
Sbjct: 335 NF--TINGASFTPPTVPVLLQILSGAQSAADL-LPAGSVYSLPANA-DIEISLPATAAAP 390
Query: 441 GFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV-FPGA 499
GF +H+ G+ F VV TYN + V R PG
Sbjct: 391 GFP-----------HPFHLHGHVFAVV-------RSAGSSTYNYANPVYRDVVSTGAPGD 432
Query: 500 WTAILVYLDNAGIWNLRAE 518
I DN G W L
Sbjct: 433 NVTIRFRTDNPGPWFLHCH 451
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 203/544 (37%), Gaps = 73/544 (13%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D TIS SP G +Q I +N FP P++ ++ +L W+
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G +W DG N CPI G + Y FQV DQ G+F+Y L Q
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ +D + V D I ++DWY + K G + D LINGLG R
Sbjct: 127 YDPQDPHKSLYDVDDDSTVITLADWYHLAAKV-------GSPVPTADATLINGLG--RSI 177
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
+ D +I V GK YR R+ ++ + F I H+L ++E + Q +
Sbjct: 178 DTLNAD---LAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDS 234
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGV--AILHYSNSLGPASGP 325
+ I Q +SF++ DQ+ +Y+I A P NS N GV AIL Y G
Sbjct: 235 IQIFAAQRYSFVLNADQDV-GNYWIRALP---NSGTRNFDGGVNSAILRY-------DGA 283
Query: 326 LPDPPNAYDTYFSMNQARSIRWNVSAGAA--RPNPQGSFKYGQITVTDVYVILNRPAELI 383
P P T + S + AA P P G V + LN
Sbjct: 284 APVEPTTSQTPSTNPLVESALTTLEGTAAPGSPAPGG-----------VDLALNMAFGFA 332
Query: 384 EGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFP----YKLMSRAPKVDTSL-INGT 438
GK+ T+NG S+ PP+ P++L A L P Y L + A ++ SL
Sbjct: 333 GGKF--TINGASFTPPTVPVLLQILSGAQSAQDL-LPSGSVYSLPANA-DIEISLPATAA 388
Query: 439 YKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV-FP 497
GF +H+ G+ F VV TYN + V R P
Sbjct: 389 APGFP-----------HPFHLHGHTFAVV-------RSAGSSTYNYENPVYRDVVSTGSP 430
Query: 498 GAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAIYCGLLSS 557
G I DN G W L G V + PE+ + P+ + C +
Sbjct: 431 GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMAEDIPEVAATNPVPQAWSDLCPTYDA 490
Query: 558 LQKD 561
L D
Sbjct: 491 LSPD 494
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 128/291 (43%), Gaps = 20/291 (6%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D TI+ SP G +Q + +NG PGP++ +L +L W+
Sbjct: 7 DLTITNAAVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G + +W DG N CPI +G ++ Y FQV DQ G+F+Y L Q
Sbjct: 67 GFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ D + V + D I + DWY + K + LG D LING G R
Sbjct: 127 YDPNDPAADLYDVDNDDTVITLVDWYHVAAK-----LGPAFPLGA-DATLINGKG--RSP 178
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
+ D +I+V PGK YR R+ ++ + F I HN+ ++ET+ T +
Sbjct: 179 STTTAD---LSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDS 235
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318
+ I Q +SF++ +Q A +Y+I A+P F N + AIL Y +
Sbjct: 236 IQIFAAQRYSFVLEANQ-AVDNYWIRANPNFGNVGFTGGINS-AILRYDGA 284
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 187/497 (37%), Gaps = 78/497 (15%)
Query: 37 TISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WNGV 91
T++ SP G + I +NG GP++ DLD P +L W+G+
Sbjct: 10 TLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGL 68
Query: 92 QHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXXXN 149
R +W DG G N CPI G + Y+F G+F+Y Q +
Sbjct: 69 FQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYD 128
Query: 150 NRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAA 209
+ D + D + I ++DWY ++ + PD LING G Y A
Sbjct: 129 DNDPHAALYDEDDENTIITLADWYHIPAPSIQGAAQ-------PDATLINGKGRYVGGPA 181
Query: 210 IVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMD 269
++NVE GK YR+R+ ++ + F I H L ++E +G T +
Sbjct: 182 A-----ELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQ 236
Query: 270 IHVGQSFSFLVTTDQNASSDYYIVASP-RFVNSSEWNKVTGV--AILHYSNSLG--PASG 324
I GQ +SF++ +Q +Y+I A P + N GV AIL Y+ + P +
Sbjct: 237 IFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTS 295
Query: 325 PLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIE 384
P+P +N+A A P P + DV N +L
Sbjct: 296 ANPNPA-------QLNEADLHALIDPAAPGIPTPGAA---------DV----NLRFQLGF 335
Query: 385 GKWRTTLNGISYLPPSTPLML-----AQQFN--IPGAYKLDFPYKLMSRAPKVDTSLING 437
R T+NG +Y PS P +L AQ N +P + P R V+ + G
Sbjct: 336 SGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELP-----RNQVVELVVPAG 390
Query: 438 TYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV-F 496
G +H+ G+AF VV TYN + V R +
Sbjct: 391 VLGG------------PHPFHLHGHAFSVV-------RSAGSSTYNFVNPVKRDVVSLGV 431
Query: 497 PGAWTAILVYLDNAGIW 513
G I DN G W
Sbjct: 432 TGDEVTIRFVTDNPGPW 448
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 187/497 (37%), Gaps = 78/497 (15%)
Query: 37 TISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WNGV 91
T++ SP G + I +NG GP++ DLD P +L W+G+
Sbjct: 10 TLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGL 68
Query: 92 QHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXXXN 149
R +W DG G N CPI G + Y+F G+F+Y Q +
Sbjct: 69 FQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYD 128
Query: 150 NRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAA 209
+ D + D + I ++DWY ++ + PD LING G Y A
Sbjct: 129 DNDPHAALYDEDDENTIITLADWYHIPAPSIQGAAQ-------PDATLINGKGRYVGGPA 181
Query: 210 IVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMD 269
++NVE GK YR+R+ ++ + F I H L ++E +G T +
Sbjct: 182 A-----ELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQ 236
Query: 270 IHVGQSFSFLVTTDQNASSDYYIVASP-RFVNSSEWNKVTGV--AILHYSNSLG--PASG 324
I GQ +SF++ +Q +Y+I A P + N GV AIL Y+ + P +
Sbjct: 237 IFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTS 295
Query: 325 PLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIE 384
P+P +N+A A P P + DV N +L
Sbjct: 296 ANPNPA-------QLNEADLHALIDPAAPGIPTPGAA---------DV----NLRFQLGF 335
Query: 385 GKWRTTLNGISYLPPSTPLML-----AQQFN--IPGAYKLDFPYKLMSRAPKVDTSLING 437
R T+NG +Y PS P +L AQ N +P + P R V+ + G
Sbjct: 336 SGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELP-----RNQVVELVVPAG 390
Query: 438 TYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV-F 496
G +H+ G+AF VV TYN + V R +
Sbjct: 391 VLGG------------PHPFHLHGHAFSVV-------RSAGSSTYNFVNPVKRDVVSLGV 431
Query: 497 PGAWTAILVYLDNAGIW 513
G I DN G W
Sbjct: 432 TGDEVTIRFVTDNPGPW 448
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 157/382 (41%), Gaps = 46/382 (12%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D TI+ SP G +Q + +NG PGP++ +L +L W+
Sbjct: 7 DNTITNAATSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G + +W DG N CPI G ++ Y FQV +Q G+F+Y L Q
Sbjct: 67 GFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ D + V + D TI ++DWY + KL NG D LING G D
Sbjct: 127 YDPNDPHASRYDVDNDDTTITLADWY-HTAAKLGPAFPNGAD-----STLINGKGRAPSD 180
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
++ +++V GK R R+ ++ + F I HN ++ET+ + N +
Sbjct: 181 SSAQ-----LSVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDS 235
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLP 327
+ I Q +SF + +Q A +Y+I A+P F N +N AIL Y + PA P
Sbjct: 236 IQIFAAQRYSFTLNANQ-AVDNYWIRANPNFGNVG-FNGGINSAILRYDGA--PAVEP-- 289
Query: 328 DPPNAYDTYFSMNQARSIR----WNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELI 383
+ NQ+ S + N+ + P P G ++ N I
Sbjct: 290 ----------TTNQSTSTQPLNETNLHPLVSTPVPGSPAAGGVDKAINMAFNFNGSNFFI 339
Query: 384 EGKWRTTLNGISYLPPSTPLML 405
NG S+ PPS P++L
Sbjct: 340 --------NGASFTPPSVPVLL 353
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 156/382 (40%), Gaps = 46/382 (12%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D TI+ SP G +Q + +NG PGP++ +L +L W+
Sbjct: 7 DNTITDAATSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G + +W DG N CPI G ++ Y FQV +Q G+F+Y L Q
Sbjct: 67 GFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ D + V + D I ++DWY + KL G D LING G D
Sbjct: 127 YDPNDPHASRYDVDNDDTVITLADWY-HTAAKLGPRFPAGAD-----ATLINGKGRAPSD 180
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
+ +I V GK R R+ ++ + F I HNL ++E + S + + +
Sbjct: 181 TSA-----ELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDS 235
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLP 327
+ I Q +SF++ +Q A +Y+I A+P F N +N AIL Y + PA P
Sbjct: 236 IQIFAAQRYSFVLNANQ-AVDNYWIRANPNFGNVG-FNGGINSAILRYDGA--PAVEP-- 289
Query: 328 DPPNAYDTYFSMNQARSIR----WNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELI 383
+ NQ S++ N+ + P P G ++ N I
Sbjct: 290 ----------TTNQTTSVKPLNEVNLHPLVSTPVPGSPSSGGVDKAINMAFNFNGSNFFI 339
Query: 384 EGKWRTTLNGISYLPPSTPLML 405
NG S++PPS P++L
Sbjct: 340 --------NGASFVPPSVPVLL 353
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 155/382 (40%), Gaps = 46/382 (12%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D TI+ SP G +Q + +NG PGP++ +L +L W+
Sbjct: 7 DLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G +W DG N CPI G ++ Y FQV DQ G+F+Y L Q
Sbjct: 67 GFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ D + V + D I ++DWY + KL G D LING G D
Sbjct: 127 YDPNDPHASRYDVDNDDTVITLADWY-HTAAKLGPRFPGGAD-----ATLINGKGRAPSD 180
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
+ +I V GK YR R+ ++ + + F I HNL ++E + + +
Sbjct: 181 SVA-----ELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDS 235
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLP 327
+ I Q +SF++ +Q A +Y+I A+P F N ++ AIL Y + PA P
Sbjct: 236 IQIFAAQRYSFVLDANQ-AVDNYWIRANPNFGNVG-FDGGINSAILRYDGA--PAVEP-- 289
Query: 328 DPPNAYDTYFSMNQARSIR----WNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELI 383
+ NQ S++ ++ + P P G ++ N I
Sbjct: 290 ----------TTNQTTSVKPLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFNGSNFFI 339
Query: 384 EGKWRTTLNGISYLPPSTPLML 405
NG S++PP+ P++L
Sbjct: 340 --------NGASFVPPTVPVLL 353
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 155/382 (40%), Gaps = 46/382 (12%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D TI+ SP G +Q + +NG PGP++ +L +L W+
Sbjct: 7 DLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G +W DG N CPI G ++ Y FQV DQ G+F+Y L Q
Sbjct: 67 GFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ D + V + D I ++DWY + KL G D LING G D
Sbjct: 127 YDPNDPHASRYDVDNDDTVITLADWYHTA-AKLGPRFPGGAD-----ATLINGKGRAPSD 180
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
+ +I V GK YR R+ ++ + + F I HNL ++E + + +
Sbjct: 181 SVA-----ELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDS 235
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLP 327
+ I Q +SF++ +Q A +Y+I A+P F N ++ AIL Y + PA P
Sbjct: 236 IQIFAAQRYSFVLDANQ-AVDNYWIRANPNFGNVG-FDGGINSAILRYDGA--PAVEP-- 289
Query: 328 DPPNAYDTYFSMNQARSIR----WNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELI 383
+ NQ S++ ++ + P P G ++ N I
Sbjct: 290 ----------TTNQTTSVKPLNEVDLHPLVSTPVPGSPSSGGVDKAINMAFNFNGSNFFI 339
Query: 384 EGKWRTTLNGISYLPPSTPLML 405
NG S++PP+ P++L
Sbjct: 340 --------NGASFVPPTVPVLL 353
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 192/502 (38%), Gaps = 69/502 (13%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D TIS +P G + + NG FPGP++ +L +L W+
Sbjct: 7 DLTISNADVTPDGFTRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G+ +W DG N CPI +G ++ Y F V DQ G+F+Y L Q
Sbjct: 67 GLFQHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ D + V D I +SDWY + K N D +LINGLG R+
Sbjct: 127 YDPSDPYASMYDVDDDTTVITLSDWYHTAAKLGPAFPPNA------DSVLINGLG--RFA 178
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
D +I VE K YR R+ ++ + F I HN+ ++E +G +
Sbjct: 179 GGNASD---LAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDS 235
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGV--AILHYSNSLGPASGP 325
+ I Q +SF++ Q+ +Y+I A P N+ + G+ AIL YS +
Sbjct: 236 IQIFASQRYSFVLNATQSV-DNYWIRAIP---NTGTIDTTGGLNSAILRYSGA------D 285
Query: 326 LPDP-PNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIE 384
+ DP NA + + + + + A P V V + +N ++
Sbjct: 286 IVDPTANATTSVIPLVETDLVPLDSPAAPGDP-----------VVGGVDLAMN-----LD 329
Query: 385 GKWRTT---LNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKG 441
+ T +N + +PP+ P++L A L P + P +N T +
Sbjct: 330 FSFNGTNFFINNETLIPPTVPVLLQILSGAQSASDL-LPTGSVYTLP------LNSTIEL 382
Query: 442 FMEIIFQNNDTTV----QSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVF- 496
I N T +H+ G+AF VV YN + V R T
Sbjct: 383 SFPITTVNGVTNAPGAPHPFHLHGHAFSVV-------RSAGSSDYNYVNPVRRDTVSTGN 435
Query: 497 PGAWTAILVYLDNAGIWNLRAE 518
PG I DNAG W L
Sbjct: 436 PGDNVTIRFTTDNAGPWFLHCH 457
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 192/495 (38%), Gaps = 67/495 (13%)
Query: 45 PLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WNGVQHRKNSWQ 99
P G + + G FPGP++ L E +L W+G + +W
Sbjct: 18 PDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWA 77
Query: 100 DG-VLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXXXNNRDVIPLP 157
DG T CPI G +++Y F V G+++Y L Q + D
Sbjct: 78 DGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANL 137
Query: 158 FAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPY 217
+ V D I ++DWY L K++ G + D LI+GLG + A VP
Sbjct: 138 YDVDDDTTIITLADWY----HVLAKEMGAGGAI-TADSTLIDGLGRTHVNVAAVP----L 188
Query: 218 QLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFS 277
+I VE GK YR+R+ ++ + +F I H++ ++ET+G + + + I Q +S
Sbjct: 189 SVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYS 248
Query: 278 FLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYF 337
F++ +Q +Y+I A+P ++ AIL Y + DP T
Sbjct: 249 FVLNANQPV-GNYWIRANPN-SGGEGFDGGINSAILRYDGAT------TADPVTVASTVH 300
Query: 338 SMNQARSIRWNVSAGAARPNP-QGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISY 396
+ + +S NP QG LN G + +NG+S+
Sbjct: 301 TKCLIETDLHPLSRNGVPGNPHQGGADCN----------LNLSLGFACGNF--VINGVSF 348
Query: 397 LPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQS 456
PP+ P++L ++ S A L +G+ +I +++T++
Sbjct: 349 TPPTVPVLL----------------QICSGANTAADLLPSGS------VISLPSNSTIEI 386
Query: 457 YHMDGYA-----FFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFP-GAWTAILVYLDNA 510
G A F + G DF V S T N D + R + G I DN
Sbjct: 387 ALPAGAAGGPHPFHLHGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNP 446
Query: 511 GIWNLRAENLDTWYL 525
G W L +D W+L
Sbjct: 447 GPWFLHCH-ID-WHL 459
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 113/262 (43%), Gaps = 19/262 (7%)
Query: 44 SPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WNGVQHRKNSW 98
SP G + I +NG FP P++ L +L W+G +W
Sbjct: 16 SPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNW 75
Query: 99 QDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXXXNNRDVIPL 156
DG N CPI +G ++ Y F V DQ G+F+Y L Q + +D
Sbjct: 76 ADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPKDPHAS 135
Query: 157 PFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIP 216
+ V + I ++DWY H R LG D LINGLG +A P
Sbjct: 136 RYDVDNESTVITLTDWY---HTAARLGPR--FPLGA-DATLINGLG----RSASTPTAA- 184
Query: 217 YQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSF 276
+INV+ GK YR R+ ++ + F I HNL ++E +G + ++ I Q +
Sbjct: 185 LAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRY 244
Query: 277 SFLVTTDQNASSDYYIVASPRF 298
SF++ +Q +Y+I A+P F
Sbjct: 245 SFVLNANQTV-GNYWIRANPNF 265
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 20/291 (6%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D T++ SP G ++ + +NG P P++ L +L W+
Sbjct: 7 DLTLTNAQVSPDGFAREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G + +W DG N CPI +G ++ Y FQV DQ G+F+Y L Q
Sbjct: 67 GFFQQGTNWADGPAFVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ D + + + D I ++DWY + KL G D LINGLG
Sbjct: 127 YDPNDPHASLYDIDNDDTVITLADWYHVA-AKLGPRFPFGSD-----STLINGLG---RT 177
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
I P + +I V GK YR R+ ++ + F I NH + ++E + T +
Sbjct: 178 TGIAPSDL--AVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDS 235
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318
+ I Q +SF++ Q +Y+I A+P F N+ + AIL Y +
Sbjct: 236 IQIFAAQRYSFVLDASQPV-DNYWIRANPAFGNTGFAGGINS-AILRYDGA 284
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 20/291 (6%)
Query: 35 DWTISYVTASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WN 89
D T++ P G ++ I +N FP P++ + +L W+
Sbjct: 7 DLTVTNANIVPDGFERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWH 66
Query: 90 GVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXX 147
G + +W DG N CPI +G ++ Y FQV Q G+F+Y L Q
Sbjct: 67 GFFQKGTNWADGPAFINQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 148 XNNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207
+ D + V D I ++DWY + KL G D LINGLG R
Sbjct: 127 YDPNDPHANLYDVDDESTVITLADWYHVA-AKLGPRFPKGAD-----STLINGLG--RST 178
Query: 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTN 267
+ D +I+V GK YR R+ ++ + F I +H L ++E +G T +
Sbjct: 179 STPTAD---LAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDS 235
Query: 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318
+ I Q +SF++ +Q+ +Y+I A+P F + + V AIL Y ++
Sbjct: 236 IQIFAAQRYSFVLNANQDV-DNYWIRANPNFGTTGFADGVNS-AILRYDDA 284
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 124/288 (43%), Gaps = 24/288 (8%)
Query: 42 TASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDE-PLLLTWNGVQHRKNSWQD 100
T +P G + + NG PGP + +L+ + W+G++ + D
Sbjct: 78 TITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYD 137
Query: 101 GVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXXNNRDVIPLPFA 159
GV G T CPI G TY+FQV Q G+ +Y Q N A
Sbjct: 138 GVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIINGPAT-----A 191
Query: 160 VPDGDI-TIFISDWYTKSHKKLRKDVENGVDLGVP---DGILINGLGPYRYDAAIVPD-- 213
D D+ IF+ DW +H+ + ++ + LG P + L+NG + A+ P+
Sbjct: 192 DYDEDVGVIFLQDW---AHESVF-EIWDTARLGAPPALENTLMNGTNTFDCSASTDPNCV 247
Query: 214 --GIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIH 271
G ++L VE G YRLR+ NVGI + F I NH L ++ + V + I
Sbjct: 248 GGGKKFELTFVE-GTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIG 306
Query: 272 VGQSFSFLVTTDQNASSD-YYIVASPRFVNSSEWNKVTGVAILHYSNS 318
+GQ + +V + NA++D Y+I + S+ IL Y +S
Sbjct: 307 IGQRYDVIV--EANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSS 352
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 124/288 (43%), Gaps = 24/288 (8%)
Query: 42 TASPLGDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDE-PLLLTWNGVQHRKNSWQD 100
T +P G + + NG PGP + +L+ + W+G++ + D
Sbjct: 78 TITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYD 137
Query: 101 GVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXXNNRDVIPLPFA 159
GV G T CPI G TY+FQV Q G+ +Y Q N A
Sbjct: 138 GVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIINGPAT-----A 191
Query: 160 VPDGDI-TIFISDWYTKSHKKLRKDVENGVDLGVP---DGILINGLGPYRYDAAIVPD-- 213
D D+ IF+ DW +H+ + ++ + LG P + L+NG + A+ P+
Sbjct: 192 DYDEDVGVIFLQDW---AHESVF-EIWDTARLGAPPALENTLMNGTNTFDCSASTDPNCV 247
Query: 214 --GIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIH 271
G ++L VE G YRLR+ NVGI + F I NH L ++ + V + I
Sbjct: 248 GGGKKFELTFVE-GTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIG 306
Query: 272 VGQSFSFLVTTDQNASSD-YYIVASPRFVNSSEWNKVTGVAILHYSNS 318
+GQ + +V + NA++D Y+I + S+ IL Y +S
Sbjct: 307 IGQRYDVIV--EANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSS 352
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 22/280 (7%)
Query: 47 GDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLT-----WNGVQHRKNSWQDG 101
G + + +NG PGP++ +L +L W+G + +W DG
Sbjct: 19 GHSRDAVVVNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADG 78
Query: 102 VLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA-AXXXXXXXXNNRDVIPLPFA 159
N CPI AG ++ Y F Q G+F+Y L Q + D +
Sbjct: 79 PAFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHLSTQYCDGDRGPFVVYDPNDPSANLYD 138
Query: 160 VPDGDITIFISDWYTKSHKKLRKDVENG-VDLGVPDGILINGLGPYRYDAAIVPDGIPYQ 218
V + + I ++DWY + +NG G D LING G R ++ D
Sbjct: 139 VDNLNTVITLTDWYHTA-------AQNGPAKPGGADATLINGQG--RGPSSPSAD---LA 186
Query: 219 LINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSF 278
+I+V GK YR R+ + + F I H + +++ + + I+ Q +SF
Sbjct: 187 VISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSF 246
Query: 279 LVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318
++ +Q A ++Y+I A+P N N + AIL YS +
Sbjct: 247 ILNANQ-AVNNYWIRANPNQGNVGFTNGINS-AILRYSGA 284
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 132/325 (40%), Gaps = 33/325 (10%)
Query: 86 LTWNGVQHRKNSWQDGVLGTN-CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXX 144
+ W+G + DG N CPI ++ Y F V Q G+++Y L Q
Sbjct: 84 IHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRG 143
Query: 145 XXXXNNRDVIPLP-FAVPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGP 203
+ + L + V D I I+DWY L + D LINGLG
Sbjct: 144 AFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFPNPNKAPPAP--DTTLINGLG- 200
Query: 204 YRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQ 263
R A P +++V+ GK YR R+ + + F I H + ++E +G
Sbjct: 201 -RNSAN--PSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPL 257
Query: 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTG---VAILHYSNSLG 320
++ I GQ +S +V +Q A +Y+I A+P S+ N TG AI Y +
Sbjct: 258 TVDSLTIFAGQRYSVVVEANQ-AVGNYWIRANP----SNGRNGFTGGINSAIFRYQGAA- 311
Query: 321 PASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPA 380
+ +P + ++ ++N+A I P P G+ D+ + L
Sbjct: 312 -----VAEPTTSQNSGTALNEANLIPLINPGAPGNPVPGGA---------DINLNLRIGR 357
Query: 381 ELIEGKWRTTLNGISYLPPSTPLML 405
+ T+NG ++PP+ P++L
Sbjct: 358 NATTADF--TINGAPFIPPTVPVLL 380
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 177/454 (38%), Gaps = 68/454 (14%)
Query: 34 YDWTISYVTASPLGDKQQ-VIGINGQFPGPILXXXXXXXXXXXXXXDLDEP-LLLTWNGV 91
++WT + + G K + VI NGQFP P + ++ + ++G+
Sbjct: 5 FNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGL 64
Query: 92 QHRKNSWQDGV-LGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXXNN 150
+ DGV T CPI G Y F V +G+++Y D Q +
Sbjct: 65 FQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKD 124
Query: 151 RDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVEN-----GVDLGVPDGILINGLGPYR 205
D P + D ++++ +S+WY L K + G + +P +++N
Sbjct: 125 -DSFPYDY---DEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAE-PIPQNLIVNNTMNLT 179
Query: 206 YDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNY 265
++ V+P TY LR+ NVG S F I++H + +VE +G T ++N
Sbjct: 180 WE--------------VQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDG-ITTEKNV 224
Query: 266 TNM-DIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASG 324
T+M I V Q ++ LV T + ++ I+ +F ++ + + + S + +
Sbjct: 225 TDMLYITVAQRYTVLVHTKNDTDKNFAIMQ--KFDDTMLDVIPSDLQLNATSYMVYNKTA 282
Query: 325 PLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIE 384
LP + N SI + +P + + V V V+++ L
Sbjct: 283 ALP----------TQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVMDN---LKN 329
Query: 385 GKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGT------ 438
G N I+Y P P ++ ++S + + S I G+
Sbjct: 330 GVNYAFFNNITYTAPKVPTLMT----------------VLSSGDQANNSEIYGSNTHTFI 373
Query: 439 --YKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMD 470
+EI+ N DT +H+ G+AF + D
Sbjct: 374 LEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRD 407
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 22/249 (8%)
Query: 49 KQQVIGINGQFPGPILXXXXXXXXXXXXXXDL-DEPLLLTWNGVQHRKNSWQDGVLG-TN 106
K++V+ ING GP + +L + W+G+ + + DG G T
Sbjct: 54 KEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTE 113
Query: 107 CPIP-AGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXXNNRDVIPLPFAVPDGDI 165
CPIP G TY+++ + Q G+ +Y Q N +P D D+
Sbjct: 114 CPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASLPY-----DIDL 167
Query: 166 TIF-ISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVE- 223
+F I+D+Y ++ L +N D +LING A+ P+ Q NV
Sbjct: 168 GVFPITDYYYRAADDLVHFTQNNAP-PFSDNVLING-------TAVNPNTGEGQYANVTL 219
Query: 224 -PGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTT 282
PGK +RLR+ N + NH + ++ + ++ + VGQ + ++
Sbjct: 220 TPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVI-- 277
Query: 283 DQNASSDYY 291
D + + D Y
Sbjct: 278 DASRAPDNY 286
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 22/249 (8%)
Query: 49 KQQVIGINGQFPGPILXXXXXXXXXXXXXXDL-DEPLLLTWNGVQHRKNSWQDGVLG-TN 106
K++V+ ING GP + +L + W+G+ + + DG G T
Sbjct: 54 KEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTE 113
Query: 107 CPIP-AGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXXNNRDVIPLPFAVPDGDI 165
CPIP G TY+++ + Q G+ +Y Q N +P D D+
Sbjct: 114 CPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASLPY-----DIDL 167
Query: 166 TIF-ISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVE- 223
+F I+D+Y ++ L +N D +LING A+ P+ Q NV
Sbjct: 168 GVFPITDYYYRAADDLVHFTQNNAP-PFSDNVLING-------TAVNPNTGEGQYANVTL 219
Query: 224 -PGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTT 282
PGK +RLR+ N + NH + ++ + ++ + VGQ + ++
Sbjct: 220 TPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVI-- 277
Query: 283 DQNASSDYY 291
D + + D Y
Sbjct: 278 DASRAPDNY 286
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 22/249 (8%)
Query: 49 KQQVIGINGQFPGPILXXXXXXXXXXXXXXDL-DEPLLLTWNGVQHRKNSWQDGVLG-TN 106
K++V+ ING GP + +L + W+G+ + + DG G T
Sbjct: 54 KEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTE 113
Query: 107 CPIP-AGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXXXXXXXNNRDVIPLPFAVPDGDI 165
CPIP G TY+++ + Q G+ +Y Q N +P D D+
Sbjct: 114 CPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASLPY-----DIDL 167
Query: 166 TIF-ISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVE- 223
+F I+D+Y ++ L +N D +LING A+ P+ Q NV
Sbjct: 168 GVFPITDYYYRAADDLVHFTQNNAP-PFSDNVLING-------TAVNPNTGEGQYANVTL 219
Query: 224 -PGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTT 282
PGK +RLR+ N + NH + ++ + ++ + VGQ + ++
Sbjct: 220 TPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVI-- 277
Query: 283 DQNASSDYY 291
D + + D Y
Sbjct: 278 DASRAPDNY 286
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 86 LTWNGVQHRKNSWQDGVLG-TNCPIP-AGWNWTYQFQVKDQIGSFFYFPSLDFQRAAXXX 143
+ W+G++ N + DG G T CPIP G TY+F+ Q G+ +Y Q
Sbjct: 133 MHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRAT-QYGTSWYHSHFSAQYGNGVV 191
Query: 144 XXXXXNNRDVIPLPFAVPDGDITIF-ISDWYTKSHKKLRKDVENGVDLGVP--DGILING 200
+ +P D D+ +F + D+Y +S +L ++ G P D +L NG
Sbjct: 192 GTIQIDGPASLPY-----DIDLGVFPLMDYYYRSADELVHFTQSN---GAPPSDNVLFNG 243
Query: 201 LGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT 260
+ A G Y + + PGK +RLR+ N + HN+ ++ T+
Sbjct: 244 TARHPETGA----GQWYN-VTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPV 298
Query: 261 VQQNYTNMDIHVGQSFSFLVTTDQNASSDYY 291
+++ + VGQ + VT D N+ Y
Sbjct: 299 NAFTVSSLFLAVGQRYD--VTIDANSPVGNY 327
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 42 TASPL---GDKQQVIGINGQFPGPILXXXXXXXXXXXXXXDLDEPLLLTWNGVQHRKNSW 98
T +PL G + ++ G FPGP L L EP L W+G+
Sbjct: 24 TPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGL-----PI 78
Query: 99 QDGVLGTNCPIPAGWNWTYQFQV-KDQIGSFFYFPSL 134
V IP G +WTY+F V K+ G+F+Y P L
Sbjct: 79 SPKVDDPFLEIPPGESWTYEFTVPKELAGTFWYHPHL 115
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Query: 470 DFGVWTENSRGTYNKWDGVARSTTQVFPGAWTA-----ILVYLDNAGIWNLRAENLDTWY 524
DFG+ SR + D +T P WTA + + +W+ +
Sbjct: 194 DFGL----SRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
Query: 525 LGQEVYVNVINPEIDKS--------APLLPDNAIYCGLLSSLQKDQAQRINFSGAPSVVD 576
G+ Y N+ N ++ S AP+ +A++ +L KD+AQR FS SV+D
Sbjct: 250 YGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309
Query: 577 ASI 579
A I
Sbjct: 310 ALI 312
>pdb|2WZI|A Chain A, Btgh84 D243n In Complex With 5f-Oxazoline
pdb|2WZI|B Chain B, Btgh84 D243n In Complex With 5f-Oxazoline
Length = 737
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 389 TTLNGISYLPPSTPLMLAQQ-FNIPGAYKLDFPYKLMSRAPKVDTSLING---TYKGFME 444
T +S PP L++ + ++P Y+L+ + A KV L++G + KG +
Sbjct: 19 TFAQNVSLQPPPQQLIVQNKTIDLPAVYQLNGGEEANPHAVKVLKELLSGKQSSKKGMLI 78
Query: 445 IIFQNNDTTVQSY------HMDGYAFFVVGMDFGVWTENSRGTY 482
I + D +V+ Y H +GY V + + + RGTY
Sbjct: 79 SIGEKGDKSVRKYSRQIPDHKEGYYLSVNEKEIVLAGNDERGTY 122
>pdb|2WZH|A Chain A, Btgh84 D242n In Complex With Meumb-Derived Oxazoline
pdb|4AIU|A Chain A, A Complex Structure Of Btgh84
Length = 737
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 389 TTLNGISYLPPSTPLMLAQQ-FNIPGAYKLDFPYKLMSRAPKVDTSLING---TYKGFME 444
T +S PP L++ + ++P Y+L+ + A KV L++G + KG +
Sbjct: 19 TFAQNVSLQPPPQQLIVQNKTIDLPAVYQLNGGEEANPHAVKVLKELLSGKQSSKKGMLI 78
Query: 445 IIFQNNDTTVQSY------HMDGYAFFVVGMDFGVWTENSRGTY 482
I + D +V+ Y H +GY V + + + RGTY
Sbjct: 79 SIGEKGDKSVRKYSRQIPDHKEGYYLSVNEKEIVLAGNDERGTY 122
>pdb|2VVN|A Chain A, Btgh84 In Complex With Nh-Butylthiazoline
pdb|2VVN|B Chain B, Btgh84 In Complex With Nh-Butylthiazoline
pdb|2VVS|A Chain A, Btgh84 Structure In Complex With Pugnac
pdb|2X0H|A Chain A, Btgh84 Michaelis Complex
pdb|2X0H|B Chain B, Btgh84 Michaelis Complex
pdb|4AIS|A Chain A, A Complex Structure Of Btgh84
pdb|4AIS|B Chain B, A Complex Structure Of Btgh84
Length = 737
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 389 TTLNGISYLPPSTPLMLAQQ-FNIPGAYKLDFPYKLMSRAPKVDTSLING---TYKGFME 444
T +S PP L++ + ++P Y+L+ + A KV L++G + KG +
Sbjct: 19 TFAQNVSLQPPPQQLIVQNKTIDLPAVYQLNGGEEANPHAVKVLKELLSGKQSSKKGMLI 78
Query: 445 IIFQNNDTTVQSY------HMDGYAFFVVGMDFGVWTENSRGTY 482
I + D +V+ Y H +GY V + + + RGTY
Sbjct: 79 SIGEKGDKSVRKYSRQIPDHKEGYYLSVNEKEIVLAGNDERGTY 122
>pdb|2JIW|A Chain A, Bacteroides Thetaiotaomicron Gh84 O-glcnacase In Complex
With 2-acetylamino-2-deoxy-1-epivalienamine
pdb|2JIW|B Chain B, Bacteroides Thetaiotaomicron Gh84 O-glcnacase In Complex
With 2-acetylamino-2-deoxy-1-epivalienamine
Length = 716
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 398 PPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLING---TYKGFMEIIFQNNDTTV 454
PP ++ + ++P Y+L+ + A KV L++G + KG + I + D +V
Sbjct: 8 PPQQLIVQNKTIDLPAVYQLNGGEEANPHAVKVLKELLSGKQSSKKGMLISIGEKGDKSV 67
Query: 455 QSY------HMDGYAFFVVGMDFGVWTENSRGTY 482
+ Y H +GY V + + + RGTY
Sbjct: 68 RKYSRQIPDHKEGYYLSVNEKEIVLAGNDERGTY 101
>pdb|2J4G|A Chain A, Bacteroides Thetaiotaomicron Gh84 O-Glcnacase In Complex
With N-Butyl-Thiazoline Inhibitor
pdb|2J4G|B Chain B, Bacteroides Thetaiotaomicron Gh84 O-Glcnacase In Complex
With N-Butyl-Thiazoline Inhibitor
Length = 715
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 398 PPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLING---TYKGFMEIIFQNNDTTV 454
PP ++ + ++P Y+L+ + A KV L++G + KG + I + D +V
Sbjct: 7 PPQQLIVQNKTIDLPAVYQLNGGEEANPHAVKVLKELLSGKQSSKKGMLISIGEKGDKSV 66
Query: 455 QSY------HMDGYAFFVVGMDFGVWTENSRGTY 482
+ Y H +GY V + + + RGTY
Sbjct: 67 RKYSRQIPDHKEGYYLSVNEKEIVLAGNDERGTY 100
>pdb|2CHO|A Chain A, Bacteroides Thetaiotaomicron Hexosaminidase With O-
Glcnacase Activity
pdb|2CHO|B Chain B, Bacteroides Thetaiotaomicron Hexosaminidase With O-
Glcnacase Activity
Length = 716
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 394 ISYLPPSTPLMLAQQ-FNIPGAYKLDFPYKLMSRAPKVDTSLING---TYKGFMEIIFQN 449
+S PP L++ + ++P Y+L+ + A KV L++G + KG + I +
Sbjct: 3 VSLQPPPQQLIVQNKTIDLPAVYQLNGGEEANPHAVKVLKELLSGKQSSKKGMLISIGEK 62
Query: 450 NDTTVQSY------HMDGYAFFVVGMDFGVWTENSRGTY 482
D +V+ Y H +GY V + + + RGTY
Sbjct: 63 GDKSVRKYSRQIPDHKEGYYLSVNEKEIVLAGNDERGTY 101
>pdb|2J47|A Chain A, Bacteroides Thetaiotaomicron Gh84 O-Glcnacase In Complex
With A Imidazole-Pugnac Hybrid Inhibitor
pdb|2W4X|A Chain A, Btgh84 In Complex With Stz
pdb|2W66|A Chain A, Btgh84 In Complex With Hq602
pdb|2W66|B Chain B, Btgh84 In Complex With Hq602
pdb|2W67|A Chain A, Btgh84 In Complex With Fma34
pdb|2W67|B Chain B, Btgh84 In Complex With Fma34
pdb|2WCA|A Chain A, Btgh84 In Complex With N-Butyl Pugnac
pdb|2XJ7|A Chain A, Btgh84 In Complex With 6-Acetamido-6-Deoxy-Castanospermine
pdb|2XJ7|B Chain B, Btgh84 In Complex With 6-Acetamido-6-Deoxy-Castanospermine
pdb|2XM1|A Chain A, Btgh84 In Complex With N-Acetyl Gluconolactam
pdb|2XM1|B Chain B, Btgh84 In Complex With N-Acetyl Gluconolactam
pdb|2XM2|A Chain A, Btgh84 In Complex With Lognac
pdb|2XM2|B Chain B, Btgh84 In Complex With Lognac
Length = 716
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 394 ISYLPPSTPLMLAQQ-FNIPGAYKLDFPYKLMSRAPKVDTSLING---TYKGFMEIIFQN 449
+S PP L++ + ++P Y+L+ + A KV L++G + KG + I +
Sbjct: 3 VSLQPPPQQLIVQNKTIDLPAVYQLNGGEEANPHAVKVLKELLSGKQSSKKGMLISIGEK 62
Query: 450 NDTTVQSY------HMDGYAFFVVGMDFGVWTENSRGTY 482
D +V+ Y H +GY V + + + RGTY
Sbjct: 63 GDKSVRKYSRQIPDHKEGYYLSVNEKEIVLAGNDERGTY 101
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Query: 470 DFGVWTENSRGTYNKWDGVARSTTQVFPGAWTA-----ILVYLDNAGIWNLRAENLDTWY 524
DFG+ SR + D +T P WTA + + +W+ +
Sbjct: 194 DFGL----SRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
Query: 525 LGQEVYVNVINPEIDKS--------APLLPDNAIYCGLLSSLQKDQAQRINFSGAPSVVD 576
G+ Y N+ N ++ S AP+ +A++ +L KD+AQR FS SV+D
Sbjct: 250 YGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309
Query: 577 ASI 579
A I
Sbjct: 310 ALI 312
>pdb|2CHN|A Chain A, Bacteroides Thetaiotaomicron Hexosaminidase With O-
Glcnacase Activity - Nag-Thiazoline Complex
pdb|2CHN|B Chain B, Bacteroides Thetaiotaomicron Hexosaminidase With O-
Glcnacase Activity - Nag-Thiazoline Complex
Length = 716
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 394 ISYLPPSTPLMLAQQ-FNIPGAYKLDFPYKLMSRAPKVDTSLING---TYKGFMEIIFQN 449
+S PP L++ + ++P Y+L+ + A KV L++G + KG + I +
Sbjct: 3 VSLQPPPQQLIVQNKTIDLPAVYQLNGGEEANPHAVKVLKELLSGKQSSKKGXLISIGEK 62
Query: 450 NDTTVQSY------HMDGYAFFVVGMDFGVWTENSRGTY 482
D +V+ Y H +GY V + + + RGTY
Sbjct: 63 GDKSVRKYSRQIPDHKEGYYLSVNEKEIVLAGNDERGTY 101
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 16/93 (17%)
Query: 450 NDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN 509
N+ + + H G++F RG Y + +FPG + + ++
Sbjct: 989 NEIDLHTVHFHGHSF----------QYKHRGVY------SSDVFDIFPGTYQTLEMFPRT 1032
Query: 510 AGIWNLRAENLDTWYLGQEVYVNVINPEIDKSA 542
GIW L D + G E V+ E KS
Sbjct: 1033 PGIWLLHCHVTDHIHAGMETTYTVLQNEDTKSG 1065
>pdb|2M1Z|A Chain A, Solution Structure Of Uncharacterized Protein Lmo0427
Length = 106
Score = 29.3 bits (64), Expect = 5.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 249 NLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTT 282
NL+ VET+G+ ++ T D+++G+ F V T
Sbjct: 34 NLIKVETQGATGIENELTEKDVNIGEVVIFAVDT 67
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 16/93 (17%)
Query: 450 NDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN 509
N+ + + H G++F RG Y + +FPG + + ++
Sbjct: 970 NEIDLHTVHFHGHSF----------QYKHRGVY------SSDVFDIFPGTYQTLEMFPRT 1013
Query: 510 AGIWNLRAENLDTWYLGQEVYVNVINPEIDKSA 542
GIW L D + G E V+ E KS
Sbjct: 1014 PGIWLLHCHVTDHIHAGMETTYTVLQNEDTKSG 1046
>pdb|3KYH|A Chain A, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus
pdb|3KYH|B Chain B, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus
Length = 310
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 160 VPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYR 205
+PD D+T + DW + + ++ + ++L + G++I+ GP R
Sbjct: 37 IPDDDLTKSVQDWVYATIYSIAPELRSFIELEMKFGVIIDAKGPDR 82
>pdb|1D8H|A Chain A, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With Sulfate And Manganese Ions.
pdb|1D8H|B Chain B, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With Sulfate And Manganese Ions.
pdb|1D8H|C Chain C, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With Sulfate And Manganese Ions.
pdb|1D8I|A Chain A, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With A Sulfate Ion.
pdb|1D8I|B Chain B, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With A Sulfate Ion.
pdb|1D8I|C Chain C, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With A Sulfate Ion
Length = 311
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 160 VPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYR 205
+PD D+T + DW + + ++ + ++L + G++I+ GP R
Sbjct: 38 IPDDDLTKSVQDWVYATIYSIAPELRSFIELEMKFGVIIDAKGPDR 83
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,960,321
Number of Sequences: 62578
Number of extensions: 849600
Number of successful extensions: 1832
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1728
Number of HSP's gapped (non-prelim): 63
length of query: 595
length of database: 14,973,337
effective HSP length: 104
effective length of query: 491
effective length of database: 8,465,225
effective search space: 4156425475
effective search space used: 4156425475
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)