Query 007633
Match_columns 595
No_of_seqs 271 out of 2150
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 06:39:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007633.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007633hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 8E-101 3E-105 850.5 56.2 506 30-557 2-543 (552)
2 3sqr_A Laccase; multicopper ox 100.0 5.7E-99 2E-103 829.2 54.1 489 28-558 64-567 (580)
3 1zpu_A Iron transport multicop 100.0 5.6E-96 2E-100 805.9 51.8 480 30-555 1-503 (534)
4 3t6v_A Laccase; beta barrel, o 100.0 1.7E-95 6E-100 792.8 48.5 478 32-556 5-492 (495)
5 3pxl_A Laccase; 4-copper prote 100.0 2.8E-95 1E-99 791.1 49.8 479 32-560 4-496 (499)
6 1v10_A Laccase; multicopper bl 100.0 3.9E-95 1.3E-99 798.2 46.5 485 28-559 20-515 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 9.2E-93 3.2E-97 776.8 44.9 478 33-561 6-496 (503)
8 2q9o_A Laccase-1; multicopper 100.0 6.6E-92 2.3E-96 778.2 50.4 488 27-558 29-546 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 3.1E-84 1.1E-88 698.7 39.4 403 27-534 12-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 6.9E-84 2.4E-88 696.9 32.5 407 30-537 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 5.7E-82 2E-86 693.3 36.9 421 31-537 36-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 8.3E-81 2.8E-85 683.8 40.1 428 30-536 24-511 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 7.1E-80 2.4E-84 665.8 39.8 415 25-534 44-480 (481)
14 3aw5_A Multicopper oxidase; be 100.0 7.6E-80 2.6E-84 664.3 31.0 385 53-534 28-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 1.9E-78 6.6E-83 682.6 41.2 461 29-538 30-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 7.7E-78 2.6E-82 649.5 34.4 417 29-533 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 3.9E-76 1.3E-80 651.6 42.9 447 29-537 30-593 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 9.6E-58 3.3E-62 537.8 36.3 392 23-469 13-487 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 3.3E-53 1.1E-57 436.8 31.6 270 30-318 1-277 (318)
20 2r7e_A Coagulation factor VIII 100.0 2E-55 6.9E-60 498.5 9.8 241 33-297 48-314 (742)
21 2zwn_A Two-domain type laccase 100.0 5.1E-52 1.7E-56 432.5 31.8 271 30-319 2-279 (339)
22 1kbv_A ANIA, major outer membr 100.0 3.7E-49 1.3E-53 408.9 30.2 262 27-319 34-309 (327)
23 2dv6_A Nitrite reductase; elec 100.0 1.1E-48 3.8E-53 423.6 26.6 401 27-538 24-436 (447)
24 3gdc_A Multicopper oxidase; be 100.0 1.8E-47 6E-52 389.3 29.9 235 30-297 33-273 (288)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 1.2E-48 4E-53 460.5 10.4 416 48-538 616-1061(1065)
26 2zoo_A Probable nitrite reduct 100.0 1.2E-45 4.1E-50 399.0 29.5 263 26-319 23-299 (442)
27 3kw8_A Laccase, putative coppe 100.0 4E-45 1.4E-49 369.7 25.8 240 27-318 3-266 (276)
28 1mzy_A Copper-containing nitri 100.0 3.1E-44 1.1E-48 373.5 28.3 269 25-319 26-320 (333)
29 1oe1_A Dissimilatory copper-co 100.0 1.1E-44 3.7E-49 377.6 24.2 268 27-319 28-320 (336)
30 3tas_A Small laccase, multi-co 100.0 1.5E-44 5.2E-49 371.8 24.6 243 24-318 6-272 (313)
31 3t9w_A Small laccase, multi-co 100.0 2E-44 6.8E-49 368.1 23.5 242 25-318 23-288 (299)
32 2bw4_A Copper-containing nitri 100.0 6.2E-44 2.1E-48 372.4 20.5 268 25-319 32-326 (340)
33 3cg8_A Laccase; oxidoreductase 100.0 1.3E-40 4.5E-45 346.1 25.2 238 28-318 45-307 (343)
34 1sdd_B Coagulation factor V; c 100.0 1.6E-40 5.5E-45 374.7 21.2 263 28-316 3-326 (647)
35 2dv6_A Nitrite reductase; elec 100.0 6.3E-39 2.2E-43 347.1 31.1 258 29-319 161-435 (447)
36 1sdd_A Coagulation factor V; c 100.0 1.2E-41 4E-46 349.4 8.8 214 51-297 50-285 (306)
37 2r7e_B Coagulation factor VIII 100.0 7.2E-41 2.5E-45 379.9 13.4 249 28-297 130-441 (770)
38 2r7e_A Coagulation factor VIII 100.0 8.1E-37 2.8E-41 346.2 9.8 216 58-298 448-697 (742)
39 3gdc_A Multicopper oxidase; be 99.9 7.1E-28 2.4E-32 244.8 13.1 231 193-535 54-288 (288)
40 3cg8_A Laccase; oxidoreductase 99.9 4.8E-27 1.6E-31 244.1 16.1 215 217-537 76-308 (343)
41 2zwn_A Two-domain type laccase 99.9 1.3E-26 4.4E-31 240.9 18.0 247 193-536 23-278 (339)
42 3g5w_A Multicopper oxidase typ 99.9 2.7E-26 9.2E-31 236.1 15.6 249 194-537 23-278 (318)
43 3kw8_A Laccase, putative coppe 99.9 1.3E-25 4.5E-30 226.7 16.6 218 217-538 35-268 (276)
44 3t9w_A Small laccase, multi-co 99.9 1.8E-25 6.1E-30 228.0 14.8 218 217-538 57-290 (299)
45 3tas_A Small laccase, multi-co 99.9 1.6E-24 5.5E-29 222.6 19.8 220 216-539 40-275 (313)
46 1sdd_A Coagulation factor V; c 99.9 7.1E-23 2.4E-27 209.7 5.5 228 218-536 60-301 (306)
47 1sdd_B Coagulation factor V; c 99.8 8E-21 2.8E-25 214.0 16.7 247 217-537 68-329 (647)
48 1kbv_A ANIA, major outer membr 99.8 1E-19 3.4E-24 188.1 16.4 248 194-537 59-309 (327)
49 2bw4_A Copper-containing nitri 99.8 3.6E-19 1.2E-23 185.2 19.1 260 193-538 59-327 (340)
50 2r7e_B Coagulation factor VIII 99.8 2.1E-21 7.1E-26 220.5 0.8 245 216-537 197-458 (770)
51 1mzy_A Copper-containing nitri 99.8 1.2E-17 3.9E-22 173.3 19.4 262 194-538 53-321 (333)
52 2zoo_A Probable nitrite reduct 99.7 6.1E-17 2.1E-21 174.4 17.1 249 194-538 49-300 (442)
53 1oe1_A Dissimilatory copper-co 99.7 2.1E-16 7.2E-21 164.0 18.9 259 194-538 54-321 (336)
54 3cvb_A Plastocyanin; cupredoxi 99.6 6.3E-17 2.2E-21 138.5 3.2 90 57-150 14-105 (105)
55 2uxt_A Protein SUFI, SUFI; oxi 99.6 4E-14 1.4E-18 152.3 21.8 238 31-298 152-427 (451)
56 2xu9_A Laccase; oxidoreductase 99.5 1.3E-13 4.5E-18 148.0 19.9 231 31-298 146-426 (439)
57 1v10_A Laccase; multicopper bl 99.5 1.6E-12 5.3E-17 142.5 20.9 240 51-299 192-478 (521)
58 1hfu_A Laccase 1; oxidoreducta 99.5 2.3E-12 8E-17 140.5 21.8 261 33-298 143-456 (503)
59 2cal_A Rusticyanin; iron respi 99.4 1.8E-13 6.3E-18 124.9 9.6 98 47-149 47-154 (154)
60 1iby_A Nitrosocyanin; RED copp 99.4 1.8E-12 6E-17 112.1 11.7 104 33-150 3-112 (112)
61 3zx1_A Oxidoreductase, putativ 99.4 1.7E-11 5.6E-16 132.3 20.4 237 32-297 181-466 (481)
62 3t6v_A Laccase; beta barrel, o 99.3 5.2E-11 1.8E-15 129.1 21.5 244 50-298 168-457 (495)
63 1fwx_A Nitrous oxide reductase 99.3 3.5E-12 1.2E-16 139.1 11.2 95 46-152 497-594 (595)
64 1zpu_A Iron transport multicop 99.3 2.2E-10 7.7E-15 125.5 22.8 244 50-298 167-467 (534)
65 3od3_A Blue copper oxidase CUE 99.3 1.2E-10 4.2E-15 125.5 18.6 250 32-297 151-475 (488)
66 1aoz_A Ascorbate oxidase; oxid 99.3 1.3E-10 4.4E-15 128.3 18.8 228 63-299 205-512 (552)
67 3pxl_A Laccase; 4-copper prote 99.2 2.9E-10 9.9E-15 123.3 20.7 244 50-298 166-457 (499)
68 3aw5_A Multicopper oxidase; be 99.2 1.7E-10 6E-15 123.8 17.7 229 32-297 138-434 (448)
69 2q9o_A Laccase-1; multicopper 99.2 9.9E-10 3.4E-14 121.2 23.5 247 50-299 195-508 (559)
70 2ov0_A Amicyanin; beta-sandwic 99.2 6.4E-11 2.2E-15 100.9 9.0 78 56-149 27-105 (105)
71 2g23_A PHS, phenoxazinone synt 99.1 5.6E-10 1.9E-14 123.5 17.2 233 51-298 255-577 (612)
72 2gim_A Plastocyanin; beta shee 99.1 1.2E-10 4.2E-15 99.3 8.3 83 61-150 19-106 (106)
73 3abg_A Bilirubin oxidase; clea 99.1 1E-09 3.5E-14 120.2 16.8 250 33-299 173-462 (534)
74 2wsd_A Spore coat protein A; o 99.1 6.5E-10 2.2E-14 121.5 15.0 218 50-298 230-496 (513)
75 2aan_A Auracyanin A; cupredoxi 99.0 5.3E-10 1.8E-14 100.3 8.1 94 434-533 36-138 (139)
76 3cvb_A Plastocyanin; cupredoxi 99.0 6.9E-10 2.4E-14 94.3 8.0 85 433-534 19-104 (105)
77 2aan_A Auracyanin A; cupredoxi 98.9 2.9E-09 9.8E-14 95.5 9.9 90 58-149 31-139 (139)
78 3sqr_A Laccase; multicopper ox 98.9 1.2E-07 4.1E-12 104.2 23.4 241 51-298 226-530 (580)
79 1qhq_A Protein (auracyanin); e 98.9 1.4E-08 4.7E-13 91.1 12.2 92 58-150 29-140 (140)
80 4hci_A Cupredoxin 1; structura 98.8 1.3E-08 4.4E-13 85.7 8.6 79 56-149 22-100 (100)
81 2plt_A Plastocyanin; electron 98.8 5.5E-09 1.9E-13 87.5 5.5 76 62-149 18-98 (98)
82 1pcs_A Plastocyanin; electron 98.7 5.5E-09 1.9E-13 87.6 4.0 81 61-149 18-98 (98)
83 3gyr_A PHS, phenoxazinone synt 98.7 1.3E-07 4.6E-12 105.6 16.5 92 194-298 459-577 (612)
84 3c75_A Amicyanin; copper prote 98.7 3.5E-08 1.2E-12 87.4 8.6 78 56-149 54-132 (132)
85 1bxv_A Plastocyanin; copper pr 98.7 2.9E-08 1E-12 81.8 7.6 74 61-149 18-91 (91)
86 2gim_A Plastocyanin; beta shee 98.7 2.5E-08 8.6E-13 84.8 6.6 85 433-534 20-105 (106)
87 1kdj_A Plastocyanin; electron 98.7 5.8E-08 2E-12 81.9 8.3 79 61-149 16-102 (102)
88 3erx_A Pseudoazurin; copper pr 98.6 9.6E-08 3.3E-12 83.2 8.5 75 62-151 21-95 (123)
89 1byp_A Protein (plastocyanin); 98.6 1.7E-07 5.8E-12 78.5 9.6 76 62-149 17-99 (99)
90 1b3i_A PETE protein, protein ( 98.6 1E-07 3.4E-12 79.6 8.0 76 62-149 19-97 (97)
91 1plc_A Plastocyanin; electron 98.6 1.8E-07 6.1E-12 78.4 9.5 76 62-149 17-99 (99)
92 3tu6_A Pseudoazurin (blue copp 98.6 1E-07 3.4E-12 83.5 7.3 76 62-152 23-98 (127)
93 3ef4_A Pseudoazurin, blue copp 98.5 2.2E-07 7.5E-12 80.8 8.2 75 62-151 22-96 (124)
94 1qhq_A Protein (auracyanin); e 98.5 3.5E-07 1.2E-11 81.8 8.8 99 434-534 34-139 (140)
95 1pcs_A Plastocyanin; electron 98.5 5.1E-07 1.7E-11 75.4 9.1 79 433-533 19-97 (98)
96 2plt_A Plastocyanin; electron 98.4 5.6E-07 1.9E-11 75.1 8.1 80 433-533 18-97 (98)
97 1bxv_A Plastocyanin; copper pr 98.4 9.1E-07 3.1E-11 72.6 8.7 72 433-533 19-90 (91)
98 1iby_A Nitrosocyanin; RED copp 98.4 1.2E-06 4E-11 75.2 9.5 73 434-534 39-111 (112)
99 1iuz_A Plastocyanin; electron 98.4 4.7E-07 1.6E-11 75.7 6.4 77 61-149 17-98 (98)
100 1paz_A Pseudoazurin precursor; 98.3 1.5E-06 5.2E-11 75.7 8.7 76 61-151 20-95 (123)
101 4hci_A Cupredoxin 1; structura 98.3 2E-06 6.9E-11 72.1 8.7 71 434-533 29-99 (100)
102 1pmy_A Pseudoazurin; electron 98.3 1.6E-06 5.6E-11 75.5 7.7 75 62-151 21-95 (123)
103 1b3i_A PETE protein, protein ( 98.3 8.5E-07 2.9E-11 73.9 5.3 77 434-533 20-96 (97)
104 1cuo_A Protein (azurin ISO-2); 98.2 2.3E-06 7.8E-11 75.1 8.0 92 58-150 14-129 (129)
105 1byp_A Protein (plastocyanin); 98.2 3.3E-06 1.1E-10 70.5 8.2 82 433-533 17-98 (99)
106 3ay2_A Lipid modified azurin p 98.1 3.9E-06 1.3E-10 76.7 7.4 97 53-150 47-167 (167)
107 1id2_A Amicyanin; beta barrel, 98.1 2.3E-05 7.9E-10 66.3 10.4 78 56-149 28-106 (106)
108 1kdj_A Plastocyanin; electron 98.0 5E-06 1.7E-10 69.8 5.3 85 433-533 17-101 (102)
109 3sbq_A Nitrous-oxide reductase 98.0 2.5E-05 8.5E-10 83.6 11.3 89 50-151 546-638 (638)
110 2ccw_A Azurin II, AZN-2; elect 98.0 2.6E-05 8.9E-10 68.3 9.2 92 58-150 14-129 (129)
111 1nwp_A Azurin; electron transp 97.9 3.5E-05 1.2E-09 67.4 8.8 91 58-149 14-128 (128)
112 2iaa_C Azurin; quinoprotein, t 97.9 3.8E-05 1.3E-09 67.1 9.0 92 58-150 13-128 (128)
113 2ux6_A Pseudoazurin; type-1 co 97.9 2.4E-05 8.2E-10 68.0 7.5 73 62-151 21-93 (122)
114 1plc_A Plastocyanin; electron 97.9 3.1E-05 1.1E-09 64.5 7.9 82 433-533 17-98 (99)
115 1fwx_A Nitrous oxide reductase 97.8 6.5E-05 2.2E-09 82.1 10.1 78 433-537 513-594 (595)
116 2ov0_A Amicyanin; beta-sandwic 97.7 6.3E-05 2.2E-09 63.4 7.0 71 434-533 34-104 (105)
117 2cal_A Rusticyanin; iron respi 97.6 0.00022 7.5E-09 64.5 8.8 83 433-533 61-153 (154)
118 3fsa_A Azurin; copper, cupredo 97.1 0.0013 4.6E-08 56.6 8.2 88 58-149 14-125 (125)
119 1iuz_A Plastocyanin; electron 97.0 0.0025 8.4E-08 52.7 8.1 80 433-533 18-97 (98)
120 2cua_A Protein (CUA); CUA cent 96.9 0.0045 1.5E-07 54.4 9.8 73 62-150 60-135 (135)
121 3tu6_A Pseudoazurin (blue copp 96.9 0.0009 3.1E-08 58.3 4.7 75 433-536 23-97 (127)
122 3ef4_A Pseudoazurin, blue copp 96.8 0.0012 4E-08 57.2 5.1 76 433-537 22-97 (124)
123 1id2_A Amicyanin; beta barrel, 96.8 0.0026 9E-08 53.4 7.1 71 434-533 35-105 (106)
124 3c75_A Amicyanin; copper prote 96.7 0.0034 1.2E-07 55.0 7.1 71 434-533 61-131 (132)
125 3erx_A Pseudoazurin; copper pr 96.6 0.003 1E-07 54.6 6.1 74 433-535 21-94 (123)
126 3s8f_B Cytochrome C oxidase su 96.5 0.014 4.9E-07 53.0 10.3 81 56-150 87-168 (168)
127 3sbq_A Nitrous-oxide reductase 96.3 0.016 5.3E-07 62.4 10.3 76 432-534 557-636 (638)
128 1paz_A Pseudoazurin precursor; 95.7 0.036 1.2E-06 47.8 8.2 74 434-536 22-95 (123)
129 2cua_A Protein (CUA); CUA cent 95.4 0.054 1.9E-06 47.4 8.6 72 435-534 62-134 (135)
130 1pmy_A Pseudoazurin; electron 95.3 0.017 5.8E-07 49.8 4.8 74 434-536 22-95 (123)
131 3ay2_A Lipid modified azurin p 94.4 0.081 2.8E-06 48.0 7.1 91 434-534 59-166 (167)
132 2ux6_A Pseudoazurin; type-1 co 94.2 0.08 2.7E-06 45.5 6.3 72 433-535 21-92 (122)
133 3s8f_B Cytochrome C oxidase su 94.2 0.17 5.8E-06 45.9 8.7 72 435-534 95-167 (168)
134 1cuo_A Protein (azurin ISO-2); 93.9 0.19 6.4E-06 43.6 8.2 92 433-534 18-128 (129)
135 2ccw_A Azurin II, AZN-2; elect 91.3 0.81 2.8E-05 39.5 8.6 92 433-534 18-128 (129)
136 2iaa_C Azurin; quinoprotein, t 91.3 0.71 2.4E-05 39.8 8.1 92 433-534 17-127 (128)
137 1nwp_A Azurin; electron transp 90.8 0.84 2.9E-05 39.4 8.1 98 433-533 18-127 (128)
138 3fsa_A Azurin; copper, cupredo 88.5 1.1 3.7E-05 38.4 6.9 93 433-533 18-124 (125)
139 3isy_A Bsupi, intracellular pr 76.7 18 0.0006 30.6 9.6 72 224-297 16-102 (120)
140 1cyx_A CYOA; electron transpor 75.7 6.3 0.00021 36.6 7.1 77 433-537 41-119 (205)
141 3hb3_B Cytochrome C oxidase su 74.5 6.7 0.00023 38.8 7.4 78 433-538 189-267 (298)
142 1cyx_A CYOA; electron transpor 69.5 9.5 0.00033 35.4 6.8 74 62-149 41-115 (205)
143 2gsm_B Cytochrome C oxidase su 68.5 10 0.00036 36.7 7.2 77 433-537 171-248 (262)
144 3isy_A Bsupi, intracellular pr 66.3 58 0.002 27.3 11.6 74 49-133 21-100 (120)
145 1yew_A Particulate methane mon 63.5 21 0.00071 35.8 8.1 70 48-123 250-336 (382)
146 1v54_B Cytochrome C oxidase po 57.8 17 0.00058 34.4 6.3 77 433-537 140-217 (227)
147 2gsm_B Cytochrome C oxidase su 57.2 22 0.00074 34.4 7.1 76 62-151 171-247 (262)
148 3rfr_A PMOB; membrane, oxidore 57.1 41 0.0014 34.1 9.1 69 48-123 284-368 (419)
149 3hb3_B Cytochrome C oxidase su 55.9 25 0.00087 34.6 7.4 77 62-152 189-266 (298)
150 2r39_A FIXG-related protein; s 50.5 45 0.0016 27.6 7.2 47 226-282 33-81 (118)
151 1fft_B Ubiquinol oxidase; elec 50.0 18 0.00061 36.0 5.2 76 434-537 152-229 (315)
152 1x9u_A Umecyanin; cupredoxin, 46.1 19 0.00065 30.1 4.1 35 117-152 72-107 (116)
153 1xwv_A DER F II; beta sheets, 41.3 33 0.0011 29.1 5.0 69 54-122 17-93 (129)
154 1nep_A EPV20, BNPC2, epididyma 39.9 33 0.0011 29.1 4.8 69 53-122 18-95 (130)
155 1v54_B Cytochrome C oxidase po 38.6 51 0.0017 31.0 6.2 76 61-151 139-216 (227)
156 2f1e_A Protein APAG; APAG prot 34.0 31 0.0011 29.3 3.5 48 73-120 34-87 (127)
157 2h7w_A Chagasin; beta-strands, 32.9 2E+02 0.0069 24.3 8.6 65 61-128 32-104 (131)
158 1xvs_A Protein APAG; MCSG APC2 30.8 32 0.0011 29.2 3.0 49 73-121 33-87 (126)
159 1xq4_A Protein APAG; all beta 29.2 44 0.0015 28.8 3.7 49 73-121 38-92 (139)
160 1ws8_A Mavicyanin; oxidized fo 28.6 59 0.002 26.7 4.3 37 116-153 71-107 (109)
161 2p9r_A Alpha-2-M, alpha-2-macr 27.6 47 0.0016 26.5 3.5 68 222-296 13-84 (102)
162 1tza_A APAG protein, SOR45; st 24.7 39 0.0013 29.0 2.6 49 73-121 33-87 (134)
163 3idu_A Uncharacterized protein 24.5 3.1E+02 0.011 22.9 9.6 67 221-297 28-97 (127)
164 2hj1_A Hypothetical protein; s 23.7 39 0.0013 27.2 2.2 24 51-74 59-82 (97)
165 1jer_A Cucumber stellacyanin; 22.6 1E+02 0.0035 26.5 4.8 36 118-153 76-111 (138)
166 1jer_A Cucumber stellacyanin; 22.1 95 0.0032 26.7 4.5 35 504-538 76-111 (138)
167 2wtp_A ORF131 protein, CZCE; m 21.8 34 0.0012 29.1 1.5 21 218-238 71-91 (131)
168 1fft_B Ubiquinol oxidase; elec 21.6 59 0.002 32.2 3.5 74 62-149 151-225 (315)
169 2xzz_A Protein-glutamine gamma 20.7 68 0.0023 26.0 3.1 56 67-127 19-78 (102)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=7.6e-101 Score=850.52 Aligned_cols=506 Identities=29% Similarity=0.540 Sum_probs=403.4
Q ss_pred CeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-CCC
Q 007633 30 PYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-TNC 107 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-tq~ 107 (595)
.+++|+|+|++..+++||.++++|+|||++|||+|+|++||+|+|+|+|+|+ ++++|||||++|.+++|+||+++ |||
T Consensus 2 ~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~ 81 (552)
T 1aoz_A 2 QIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQC 81 (552)
T ss_dssp CEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBC
T ss_pred eEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccC
Confidence 4799999999999999999999999999999999999999999999999998 99999999999999999999998 999
Q ss_pred ccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHhCC
Q 007633 108 PIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVENG 187 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~g 187 (595)
+|+||++|+|+|++ +++||||||||.+.|+++||+|+|||++++....|+ ..|+|++|+|+||+++....+...+...
T Consensus 82 ~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 159 (552)
T 1aoz_A 82 AINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSK 159 (552)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred CcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcc
Confidence 99999999999999 799999999999999999999999999987655555 3468999999999998776554333322
Q ss_pred --CCCCCCCeEEEcCCCCCCCCCCC-----------C-CCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEE
Q 007633 188 --VDLGVPDGILINGLGPYRYDAAI-----------V-PDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLV 253 (595)
Q Consensus 188 --~~~~~~d~~liNG~~~~~~~~~~-----------~-~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~vi 253 (595)
...+.++.++|||+..++|+... . ...+..+.++|++|++|||||||+|..+.+.|+|+||+|+||
T Consensus 160 ~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi 239 (552)
T 1aoz_A 160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVV 239 (552)
T ss_dssp SCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEE
T ss_pred cccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEE
Confidence 12246799999999988774321 0 112234589999999999999999999999999999999999
Q ss_pred eecCcceeeeeeeEEEEeccceEEEEEEeC-CCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCC--CCCCCCCCC
Q 007633 254 ETEGSYTVQQNYTNMDIHVGQSFSFLVTTD-QNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGP--ASGPLPDPP 330 (595)
Q Consensus 254 a~DG~~~~p~~~d~l~i~pGqR~dvlv~~~-~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~--~~~~lp~~p 330 (595)
++||.+++|..++++.|+|||||||+|+++ +.+| +|||++....... ......|+|+|.++... +..+.|..+
T Consensus 240 ~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g-~y~i~~~~~~~~~---~~~~~~ail~y~~~~~~~~p~~~~p~~p 315 (552)
T 1aoz_A 240 EADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE-NYWVSVGTRARHP---NTPPGLTLLNYLPNSVSKLPTSPPPQTP 315 (552)
T ss_dssp EETTEEEEEEEESCEEECTTCEEEEEEECCSCTTC-CEEEEEEEESSCC---CSCCEEEEEEETTSCTTSCCSSCCCCCC
T ss_pred EECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCC-CEEEEEEcccCCC---CCccEEEEEEECCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999994 4567 9999998764211 23567899999876521 111223222
Q ss_pred CCCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcC
Q 007633 331 NAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFN 410 (595)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~ 410 (595)
...+....... .++ .+....+.+.| ..+++++.+..+.. ..++..+|+|||++|..+..|++.+.+.+
T Consensus 316 ~~~~~~~~~~~--~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~-~~~~~~~w~iNg~s~~~p~~P~L~~~~~~ 383 (552)
T 1aoz_A 316 AWDDFDRSKNF--TYR-ITAAMGSPKPP--------VKFNRRIFLLNTQN-VINGYVKWAINDVSLALPPTPYLGAMKYN 383 (552)
T ss_dssp CTTCHHHHHHH--HTT-CCBCTTCCCCC--------SSCSEEEEEEEEEE-EETTEEEEEETTEEECCCSSCHHHHHHTT
T ss_pred ccccccccccc--ccc-ccccCCCCCCC--------CCCcEEEEEEEeec-cCCCeEEEEECCCccCCCCCCHHHHHhhc
Confidence 11111100000 000 01100011111 24567777765321 23456789999999998899999887777
Q ss_pred CCCccccCCCCCCC-----------CCCCccceeEEecCCCcEEEEEEEcCCC------ccceeeecCceEEEEEEeCCc
Q 007633 411 IPGAYKLDFPYKLM-----------SRAPKVDTSLINGTYKGFMEIIFQNNDT------TVQSYHMDGYAFFVVGMDFGV 473 (595)
Q Consensus 411 ~~~~~~~~~~~~p~-----------~~~~~~~~~v~~~~~g~~ve~vi~N~~~------~~HP~HlHG~~F~Vl~~g~G~ 473 (595)
+++.|+.+++..+. +...+.++.++.++.|++|+|+|+|.+. ..||||||||+||||+++.|.
T Consensus 384 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~ 463 (552)
T 1aoz_A 384 LLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGK 463 (552)
T ss_dssp CTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESS
T ss_pred CccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCc
Confidence 77777654443211 1234566788999999999999999873 459999999999999999999
Q ss_pred cCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCCcccccc
Q 007633 474 WTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDNAIYCG 553 (595)
Q Consensus 474 ~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~~~~~c~ 553 (595)
|++.....||+.+|+|||||.|++++|++|||++||||.|+|||||++|++.|||+.|.+... +..++|++.+.|+
T Consensus 464 ~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~----~~~~~P~~~~~C~ 539 (552)
T 1aoz_A 464 FSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE----KVGRIPTKALACG 539 (552)
T ss_dssp CCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG----GCCCCCHHHHSSH
T ss_pred cCcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch----hhccCCcchhhhh
Confidence 987555679999999999999999999999999999999999999999999999999976533 3556899999999
Q ss_pred CccC
Q 007633 554 LLSS 557 (595)
Q Consensus 554 ~~~~ 557 (595)
.++.
T Consensus 540 ~~~~ 543 (552)
T 1aoz_A 540 GTAK 543 (552)
T ss_dssp HHHH
T ss_pred ccCc
Confidence 8764
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=5.7e-99 Score=829.19 Aligned_cols=489 Identities=22% Similarity=0.301 Sum_probs=385.8
Q ss_pred CCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-C
Q 007633 28 GDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-T 105 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-t 105 (595)
.+.+++|+|++++.++++||+.+++|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++|+||+++ |
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 456899999999999999999999999999999999999999999999999998 89999999999999999999998 9
Q ss_pred CCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCce-eEeeeccccccHHHHHHHH
Q 007633 106 NCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDI-TIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 106 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~l~~~~ 184 (595)
||||+||++|+|+|++ +|+||||||||.+.|+++||+|+|||++++. .+| |.|+ +|+|+||+++...++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~y---D~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--ADY---DEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--CCC---CccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999999 5999999999999999999999999998764 234 8887 9999999999877765544
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCC---CCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCccee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAI---VPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV 261 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~---~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~ 261 (595)
..+ ..+.+|.++|||++.++|+... .......+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++
T Consensus 218 ~~~-~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~ 296 (580)
T 3sqr_A 218 RLG-APPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIV 296 (580)
T ss_dssp TTS-CCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEE
T ss_pred hcc-CCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCC
Confidence 432 3567899999999998885321 112334689999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccc
Q 007633 262 QQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQ 341 (595)
Q Consensus 262 p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~ 341 (595)
|..++++.|+|||||||+|++++++| +|||++.....+..........|||+|.++... .|..+.....+...+.
T Consensus 297 P~~~~~l~i~pGqRydVlv~a~~~~g-~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~~~~~~~~~~~ 371 (580)
T 3sqr_A 297 PYTTDTLLIGIGQRYDVIVEANAAAD-NYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVGTTPRGTCEDE 371 (580)
T ss_dssp EEEESSEEECTTCEEEEEEECCSCSS-EEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCCCCCCCCSCCS
T ss_pred ceEeeEEEEccceEEEEEEEeCCCCC-eEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCCCCccchhhcc
Confidence 99999999999999999999998888 999999876433211233578999999765321 1211110000001110
Q ss_pred ccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecC-CCCCcHhhhhhcCCCCccccCCC
Q 007633 342 ARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYL-PPSTPLMLAQQFNIPGAYKLDFP 420 (595)
Q Consensus 342 ~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~-~~~~P~~~~~~~~~~~~~~~~~~ 420 (595)
...++.+..+.+.|. ..+.++.+.. ..++..+|+|||++|. +++.|.++..+. |. .++
T Consensus 372 ---~~~~L~P~~~~~~~~--------~~~~~~~l~~----~~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~--~~~- 430 (580)
T 3sqr_A 372 ---PVASLVPHLALDVGG--------YSLVDEQVSS----AFTNYFTWTINSSSLLLDWSSPTTLKIFN---NE--TIF- 430 (580)
T ss_dssp ---CGGGCCBSSCCBCCS--------EEEEEEEEEE----EESSSEEEEETTBCCCCCTTSCHHHHHHT---TC--CCC-
T ss_pred ---cccccccCCCCCCCC--------ccceEEEEEe----ccCCceeEEECCEecccCCCCCchhhhhc---CC--ccC-
Confidence 001233322222221 2233333332 2345789999999997 578898765432 11 011
Q ss_pred CCCCCCCCccceeEEecC----CCcEEEEEEEcCC--CccceeeecCceEEEEEEeCCccCCCC-CCCCCCCCCCcccEE
Q 007633 421 YKLMSRAPKVDTSLINGT----YKGFMEIIFQNND--TTVQSYHMDGYAFFVVGMDFGVWTENS-RGTYNKWDGVARSTT 493 (595)
Q Consensus 421 ~~p~~~~~~~~~~v~~~~----~g~~ve~vi~N~~--~~~HP~HlHG~~F~Vl~~g~G~~~~~~-~~~~n~~~p~~rDTv 493 (595)
|. ..+++.++ .|++|||+|+|.+ ...||||||||+||||++|.|.|++.. ...||+.||++|||+
T Consensus 431 --~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv 502 (580)
T 3sqr_A 431 --PT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVA 502 (580)
T ss_dssp --CG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEE
T ss_pred --CC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEE
Confidence 11 23444554 6999999999987 788999999999999999999998754 367999999999999
Q ss_pred EeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCCc-cccccCccCC
Q 007633 494 QVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDN-AIYCGLLSSL 558 (595)
Q Consensus 494 ~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~~-~~~c~~~~~~ 558 (595)
.|+|+||++|||++||||+|+|||||++|++.||++.|.+ .++..++..++|++ ...|..++..
T Consensus 503 ~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e-~~~~i~~~~~~~~~~~~~C~~~~~~ 567 (580)
T 3sqr_A 503 ALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVE-SQSSIAVKMTDTAIFEDTCANWNAY 567 (580)
T ss_dssp EECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEE-SGGGCCCCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEE-CHHHHhhccCCcHHHHHhhHHHhhh
Confidence 9999999999999999999999999999999999998776 44444333335655 5689887654
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-96 Score=805.89 Aligned_cols=480 Identities=22% Similarity=0.298 Sum_probs=375.5
Q ss_pred CeEEEEEEEEEEEecCCC-eeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-CC
Q 007633 30 PYVFYDWTISYVTASPLG-DKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-TN 106 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~~G-~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-tq 106 (595)
.+++|+|++++..++||| .++++|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++|+||+++ ||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 378999999999999999 7999999999999999999999999999999999 99999999999999999999998 99
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHhC
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVEN 186 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~ 186 (595)
|||+||++|+|+|++++++||||||||.+.|+++||+|+|||++++. |+ .+|+|++|+|+||+++...++......
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999976999999999999999999999999999753 33 458999999999999988776543221
Q ss_pred ----CCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceee
Q 007633 187 ----GVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ 262 (595)
Q Consensus 187 ----g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p 262 (595)
....+.+|.+||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~--------------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P 222 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN--------------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEK 222 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS--------------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred cccCCCCCCCCceEEECCCCc--------------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccc
Confidence 22346789999999986 899999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccC---CCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccc
Q 007633 263 QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVN---SSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSM 339 (595)
Q Consensus 263 ~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~---~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~ 339 (595)
..++++.|+|||||||+|++++.++++|||++...... ..........++|+|.++... |..+........+
T Consensus 223 ~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~~~~~~~~~~~~ 297 (534)
T 1zpu_A 223 NVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PTQNYVDSIDNFL 297 (534)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CCCCCCSCSSCSC
T ss_pred cEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CCCCccccccccc
Confidence 99999999999999999999875544999999765321 111223567899999865421 1111000000001
Q ss_pred ccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCC
Q 007633 340 NQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDF 419 (595)
Q Consensus 340 ~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~ 419 (595)
+.. .+.+....+.+ ..+++++.+..+.....++..+|+|||++|..+..|+++..+. .+.+..
T Consensus 298 ~~~-----~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~--~~~~~~-- 360 (534)
T 1zpu_A 298 DDF-----YLQPYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLS--SGDQAN-- 360 (534)
T ss_dssp CGG-----GCCBSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTT--SGGGTT--
T ss_pred ccc-----cceeCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecc--cCcccC--
Confidence 110 11111111111 1345677665432212355678999999999889998765431 122210
Q ss_pred CCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCC----------ccCCCCCCCCCCCCCCc
Q 007633 420 PYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFG----------VWTENSRGTYNKWDGVA 489 (595)
Q Consensus 420 ~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G----------~~~~~~~~~~n~~~p~~ 489 (595)
.+. ....+++++.++.|++|+|+|+|.+.+.||||||||+||||+++.+ .|++.....+ ..+|+|
T Consensus 361 --~~~--~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~~ 435 (534)
T 1zpu_A 361 --NSE--IYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPMR 435 (534)
T ss_dssp --CGG--GGCSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCEE
T ss_pred --CCc--ccCCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCCe
Confidence 010 1112356788999999999999998899999999999999999875 5554433233 468999
Q ss_pred ccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCC--CCCCCccc-cccCc
Q 007633 490 RSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSA--PLLPDNAI-YCGLL 555 (595)
Q Consensus 490 rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~--~~~p~~~~-~c~~~ 555 (595)
||||.|+|++|++|||++||||.|+|||||++|++.|||..|.+. ++..+++ .++|++.. .|..+
T Consensus 436 RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~-~~~~~~~~~~~~p~~~~~~C~~~ 503 (534)
T 1zpu_A 436 RDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVED-PFGIQDAHSQQLSENHLEVCQSC 503 (534)
T ss_dssp ESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEEC-HHHHHHCGGGSCCHHHHHHHHHT
T ss_pred eeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEEC-ccccccccccCCChhHhhhhhcc
Confidence 999999999999999999999999999999999999999998764 3333333 56676654 55443
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.7e-95 Score=792.79 Aligned_cols=478 Identities=23% Similarity=0.358 Sum_probs=368.2
Q ss_pred EEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCC-----CceeeeCCccCCCCCCCCCCCC-C
Q 007633 32 VFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDE-----PLLLTWNGVQHRKNSWQDGVLG-T 105 (595)
Q Consensus 32 ~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~-t 105 (595)
..|+|++++..++|||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|++++|+||+++ |
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCC-CCCCCCCCCceeEeeeccccccHHHHHHHH
Q 007633 106 NCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVI-PLPFAVPDGDITIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 106 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~ 184 (595)
||||+||++|+|+|++++|+||||||||.+.|+.+||+|+|||+++++. ..+|+..++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999889999999999999999999999999987542 22343345678999999999865432
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQN 264 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~ 264 (595)
.+.....+|.++|||++.+.|.. .....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|..
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~----~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNV----AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSC----CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCc----ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 12233478999999998766632 1234689999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccc
Q 007633 265 YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARS 344 (595)
Q Consensus 265 ~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~ 344 (595)
++++.|+|||||||+|++++++| +|||++.....+.. .......|+|+|.++.... |....+. .... .+.
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~--p~~~~~~-~~~~-~~~---- 305 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNSGGEG-FDGGINSAILRYDGATTAD--PVTVAST-VHTK-CLI---- 305 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSC--CCCCCCS-SCSS-BCC----
T ss_pred eeeEEEcCceEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEECCCCCCC--CCCCCCC-CCcc-ccc----
Confidence 99999999999999999998778 99999987543221 1123457999998654211 1111000 0000 000
Q ss_pred cccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCC
Q 007633 345 IRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLM 424 (595)
Q Consensus 345 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~ 424 (595)
..++.+....+.|.. .. ...+++++.+... .++ .+|+|||++|..++.|++++.+ .+.+.. .+
T Consensus 306 -~~~L~p~~~~~~p~~-~~--~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~---~g~~~~--~~--- 368 (495)
T 3t6v_A 306 -ETDLHPLSRNGVPGN-PH--QGGADCNLNLSLG----FAC-GNFVINGVSFTPPTVPVLLQIC---SGANTA--AD--- 368 (495)
T ss_dssp -GGGCCBSSCCCCSSC-SS--TTCSSEEEECCEE----EET-TEEEETTBCCCCCSSCHHHHHH---TTCCSS--TT---
T ss_pred -cccccccccccCCCc-cC--CCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCcchhhhh---cCCcCc--cc---
Confidence 111222211111110 00 1124556555432 222 2799999999988999877653 222221 00
Q ss_pred CCCCccceeEEecCCCcEEEEEEE-cCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCC-CcEEE
Q 007633 425 SRAPKVDTSLINGTYKGFMEIIFQ-NNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFP-GAWTA 502 (595)
Q Consensus 425 ~~~~~~~~~v~~~~~g~~ve~vi~-N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p-~g~~~ 502 (595)
.....+++.++.|++|||+|+ |.....||||||||+|+||+++. ...+|+.+|++|||+.|++ |+|++
T Consensus 369 ---~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g-------~~~~n~~~P~~rDtv~v~~~g~~~~ 438 (495)
T 3t6v_A 369 ---LLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESAS-------NSTSNYDDPIWRDVVSIGGVGDNVT 438 (495)
T ss_dssp ---SSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCSTTCEEE
T ss_pred ---ccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCC-------CCCcccCCCCCccEEEcCCCCcEEE
Confidence 111345788999999999999 66678899999999999998742 2358999999999999997 89999
Q ss_pred EEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCCc-cccccCcc
Q 007633 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDN-AIYCGLLS 556 (595)
Q Consensus 503 irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~~-~~~c~~~~ 556 (595)
|||++||||.|+|||||++|++.||++.| +..++..++..++|++ ...|..++
T Consensus 439 irf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 439 IRFCTDNPGPWFLHCHIDWHLDAGFAIVF-AEDIPNTASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp EEEECCSCEEEEEEESCHHHHHTTCEEEE-EETHHHHHHHCCCCHHHHHHHHHHH
T ss_pred EEEEcCCCeeEEEEecchhHhhcCCeEEE-EEChhHhccccCCCHHHHHHhhHhh
Confidence 99999999999999999999999999877 4555544333445654 56887653
No 5
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.8e-95 Score=791.10 Aligned_cols=479 Identities=25% Similarity=0.378 Sum_probs=371.4
Q ss_pred EEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCC-----CceeeeCCccCCCCCCCCCCCC-C
Q 007633 32 VFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDE-----PLLLTWNGVQHRKNSWQDGVLG-T 105 (595)
Q Consensus 32 ~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~-t 105 (595)
..|+|++++..++|||+.+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|++++|+||+++ |
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCC-CCCCCCCCCceeEeeeccccccHHHHHHHH
Q 007633 106 NCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVI-PLPFAVPDGDITIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 106 q~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~ 184 (595)
||||+||++|+|+|++++|+||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999889999999999999999999999999987541 2234333567899999999975432
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQN 264 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~ 264 (595)
.+.....+|.++|||++.++|.. ....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|..
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~~-----~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~ 232 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSDS-----VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTCT-----TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCCC-----CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceE
Confidence 22233478999999999876632 234689999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccc
Q 007633 265 YTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARS 344 (595)
Q Consensus 265 ~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~ 344 (595)
++++.|+|||||||+|++++++| +|||++.....+.. .......|+|+|.++...... .+..+. .. .+.
T Consensus 233 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~p~-~~~~~~---~~-~~~---- 301 (499)
T 3pxl_A 233 VDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNFGNVG-FDGGINSAILRYDGAPAVEPT-TNQTTS---VK-PLN---- 301 (499)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSCCC-CCCCCC---SS-BCC----
T ss_pred eeeEEECCCcEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEeCCCCCCCCC-CCCCCC---Cc-ccc----
Confidence 99999999999999999998778 99999987543221 122345799999875421110 010010 00 000
Q ss_pred cccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCC
Q 007633 345 IRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLM 424 (595)
Q Consensus 345 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~ 424 (595)
..++.+....+.|.. . ....+++++.+... .++ .+|+|||++|..++.|++++.+ .+.+.. .+
T Consensus 302 -~~~L~p~~~~~~p~~-~--~~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~---~g~~~~--~~--- 364 (499)
T 3pxl_A 302 -EVDLHPLVSTPVPGA-P--SSGGVDKAINMAFN----FNG-SNFFINGASFVPPTVPVLLQIL---SGAQTA--QD--- 364 (499)
T ss_dssp -GGGCCBSSCCCCSSC-S--STTCSSEEEECCEE----ECS-SCEEETTBCCCCCSSCHHHHHH---TTCCST--TT---
T ss_pred -cccccccccccCCCc-c--cCCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCchhhhhh---cCCccc--cc---
Confidence 012222211111110 0 01134566655432 222 2799999999988999887653 222221 00
Q ss_pred CCCCccceeEEecCCCcEEEEEEE---cCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCC---C
Q 007633 425 SRAPKVDTSLINGTYKGFMEIIFQ---NNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFP---G 498 (595)
Q Consensus 425 ~~~~~~~~~v~~~~~g~~ve~vi~---N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p---~ 498 (595)
.....+++.++.|++|||+|+ |.....||||||||+|+||+.+. ...||+.+|++|||+.|++ +
T Consensus 365 ---~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g-------~~~~n~~~P~~rDtv~v~~~~pg 434 (499)
T 3pxl_A 365 ---LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG-------STVYNYDNPIFRDVVSTGTPAAG 434 (499)
T ss_dssp ---SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCCGGGT
T ss_pred ---cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC-------CcccccCCCCccceEEcCCcCCC
Confidence 111345788999999999999 55667899999999999998642 2358999999999999997 9
Q ss_pred cEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCCc-cccccCccCCCc
Q 007633 499 AWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPDN-AIYCGLLSSLQK 560 (595)
Q Consensus 499 g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~~-~~~c~~~~~~~~ 560 (595)
+|++|||++||||.|+|||||++|++.||++.| +..++..++..++|++ ...|..++..+.
T Consensus 435 ~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~~~~~~p~~~~~~C~~~~~~~~ 496 (499)
T 3pxl_A 435 DNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVM-AEDTPDVKAVNPVPQAWSDLCPTYDALDP 496 (499)
T ss_dssp CEEEEEEECCSCEEEEEEESSHHHHHTTCEEEE-EESGGGHHHHSCCCHHHHTHHHHHHTSCG
T ss_pred cEEEEEEEcCCCceEEEEeCChhHhhCCCcEEE-EEChhHhccccCCCHHHHHhhhHhhccCc
Confidence 999999999999999999999999999999877 5666655333345654 679988877643
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=3.9e-95 Score=798.24 Aligned_cols=485 Identities=21% Similarity=0.289 Sum_probs=373.1
Q ss_pred CCCeEEEEEEEEEEEecCCCe-eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-----CCceeeeCCccCCCCCCCCC
Q 007633 28 GDPYVFYDWTISYVTASPLGD-KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-----EPLLLTWNGVQHRKNSWQDG 101 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~G~-~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DG 101 (595)
++...+|+|++++.++++||+ .+++|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++++++|+||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 345678999999999999999 999999999999999999999999999999999 99999999999999999999
Q ss_pred CCC-CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCC-CCCCCCCCCceeEeeeccccccHHH
Q 007633 102 VLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVI-PLPFAVPDGDITIFISDWYTKSHKK 179 (595)
Q Consensus 102 v~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~ 179 (595)
+++ |||+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++++. +.+|+..++|++|+++||+++...+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 998 99999999999999997789999999999999999999999999987531 2234333479999999999987665
Q ss_pred HHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcc
Q 007633 180 LRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSY 259 (595)
Q Consensus 180 l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~ 259 (595)
+.. ..+...+.+|.++|||++.+.|.. .....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+
T Consensus 180 ~~~--~~~~~~~~~d~~liNG~~~~~~~~----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 180 LFP--NPNKAPPAPDTTLINGLGRNSANP----SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp --------CCCSCCSEEEETTBCCCSSCG----GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred Hhh--ccCCCCCCCCEEEECCcccCCCCC----CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 532 122334668999999999876631 12345899999999999999999999999999999999999999999
Q ss_pred eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccc
Q 007633 260 TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSM 339 (595)
Q Consensus 260 ~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~ 339 (595)
++|..++++.|+|||||||+|++++.+| +|||++........ .......++|+|.+.....+ .+......+ +
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~~~g-~y~i~~~~~~~~~~-~~~~~~~ail~y~~~~~~~p--~~~~~~~~~----~ 325 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNG-FTGGINSAIFRYQGAAVAEP--TTSQNSGTA----L 325 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTCCSCCC--CCCCCCSCB----C
T ss_pred ccceeeeeEEEcccceEEEEEEcCCCCC-ceeeeecccccccc-CCCCceeEEEEECCCCCCCC--CCCCCcccc----c
Confidence 9999999999999999999999998777 99999987643221 11123469999987543211 110000001 1
Q ss_pred ccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCe-EEEEecCeecCCCCCcHhhhhhcCCCCccccC
Q 007633 340 NQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGK-WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLD 418 (595)
Q Consensus 340 ~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~ 418 (595)
+. .++.+....+.|.... ....++++.+.. ..++. .+|+|||++|..+..|++++.+. +.++.
T Consensus 326 ~~-----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~----~~~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~- 389 (521)
T 1v10_A 326 NE-----ANLIPLINPGAPGNPV---PGGADINLNLRI----GRNATTADFTINGAPFIPPTVPVLLQILS---GVTNP- 389 (521)
T ss_dssp CG-----GGCCBSSCCCCSSCSS---TTCSSEEEECCE----ECCSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCG-
T ss_pred ch-----hhcccCCcccCCCccc---CCcceEEEEEEE----ecCCceeEEEECCCcccCCCCchhhhhhc---CCccc-
Confidence 10 1122221122221100 012345554432 12332 47999999999888888765432 22210
Q ss_pred CCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEe-CC
Q 007633 419 FPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV-FP 497 (595)
Q Consensus 419 ~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v-~p 497 (595)
. ....+.+++.++.|++|||+++| .+.||||||||+||||+++.+. .+|+.+|.|||||.| +|
T Consensus 390 -~------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~ 453 (521)
T 1v10_A 390 -N------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGG 453 (521)
T ss_dssp -G------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBS
T ss_pred -c------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCC
Confidence 0 01124567889999999999999 6789999999999999997653 378899999999999 89
Q ss_pred CcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCCC-ccccccCccCCC
Q 007633 498 GAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLPD-NAIYCGLLSSLQ 559 (595)
Q Consensus 498 ~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p~-~~~~c~~~~~~~ 559 (595)
++|++|||++||||.|+|||||++|++.|||..|.|...+ .++..++|+ +...|..++...
T Consensus 454 gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~-~~~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 454 GDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN-IPIANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp SCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG-HHHHSCCCHHHHTHHHHHTTCC
T ss_pred CcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc-hhhccCCChHHhhhchhhhccC
Confidence 9999999999999999999999999999999999875433 333445564 578999987763
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=9.2e-93 Score=776.82 Aligned_cols=478 Identities=26% Similarity=0.402 Sum_probs=370.6
Q ss_pred EEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-----CCceeeeCCccCCCCCCCCCCCC-CC
Q 007633 33 FYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-----EPLLLTWNGVQHRKNSWQDGVLG-TN 106 (595)
Q Consensus 33 ~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~-tq 106 (595)
.|+|++++.++++||.++++|+|||++ ||+|++++||+|+|+|+|+|+ ++++|||||+++++++|+||+++ ||
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 699999999999999999999999999 999999999999999999999 99999999999998999999998 99
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCC-CCCCCCCCCceeEeeeccccccHHHHHHHHh
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVI-PLPFAVPDGDITIFISDWYTKSHKKLRKDVE 185 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~ 185 (595)
|+|+||++|+|+|++++++||||||||.+.|+++||+|+|||+++++. +.+|...++|++|+++||+++...++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~--- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG--- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC---
Confidence 999999999999997789999999999999999999999999987532 2334333479999999999987654321
Q ss_pred CCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeee
Q 007633 186 NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNY 265 (595)
Q Consensus 186 ~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~ 265 (595)
.+.+|.++|||++.+.|.. ....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|..+
T Consensus 162 ----~~~~d~~liNG~~~~~~~~-----~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 162 ----AAQPDATLINGKGRYVGGP-----AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp ------CCSEEEETTBCCBTTCC-----CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ----CCCCCEEEECcccccCCCC-----CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 1468999999999877632 2345899999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC---CCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccc
Q 007633 266 TNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS---EWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQA 342 (595)
Q Consensus 266 d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~ 342 (595)
+++.|+|||||||+|++++++| +|||++........ ........++|+|.++....+. .+..+... .++.
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~-~~~~~~~~----~l~~- 305 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPT-TSANPNPA----QLNE- 305 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCC-CCCCSSCC----BCCG-
T ss_pred CeEEEcccceEEEEEEcCCCcc-ceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCC-CCCCCccC----CCcc-
Confidence 9999999999999999998777 89999976532211 0111234699999875421110 00011100 1111
Q ss_pred cccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCC
Q 007633 343 RSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYK 422 (595)
Q Consensus 343 ~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~ 422 (595)
.++.+....+.|.... ....++++.+.. ..++. +|+|||++|..+..|++++.+ .+.++.
T Consensus 306 ----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~----~~~~~-~~~iNg~~~~~~~~P~l~~~~---~g~~~~----- 365 (503)
T 1hfu_A 306 ----ADLHALIDPAAPGIPT---PGAADVNLRFQL----GFSGG-RFTINGTAYESPSVPTLLQIM---SGAQSA----- 365 (503)
T ss_dssp ----GGCBBSSSCSCSSCSS---TTCSSEEEECCE----EEETT-EEEETTBCCCCCSSCHHHHHH---TTCCSG-----
T ss_pred ----ccccccCccCCCCccc---CCcceEEEEEEe----eccCc-eEEECCCccCCCCCcchhhhh---cCCccc-----
Confidence 1122221112221100 012334444332 11233 799999999988888876653 222210
Q ss_pred CCCCCCccceeEEecCCCcEEEEEEEc-CCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEe-CCCcE
Q 007633 423 LMSRAPKVDTSLINGTYKGFMEIIFQN-NDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQV-FPGAW 500 (595)
Q Consensus 423 p~~~~~~~~~~v~~~~~g~~ve~vi~N-~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v-~p~g~ 500 (595)
. ....+..++.++.|++|||+++| ...+.||||||||+||||+++.+. .+|+.+|.|||||.| +|++|
T Consensus 366 -~--~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~ 435 (503)
T 1hfu_A 366 -N--DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDE 435 (503)
T ss_dssp -G--GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCE
T ss_pred -c--cCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCce
Confidence 0 11224578889999999999995 446789999999999999997653 378889999999999 99999
Q ss_pred EEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCCC-CccccccCccCCCcc
Q 007633 501 TAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLLP-DNAIYCGLLSSLQKD 561 (595)
Q Consensus 501 ~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~p-~~~~~c~~~~~~~~~ 561 (595)
++|||++||||.|+|||||++|++.|||..|.|...+ .++..++| ++...|+.++..+..
T Consensus 436 v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~-~~~~~~~p~~~~~~C~~~~~~~~~ 496 (503)
T 1hfu_A 436 VTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN-TVDANNPPVEWAQLCEIYDDLPPE 496 (503)
T ss_dssp EEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH-HHHHCCCCHHHHHHHHHHHTCCHH
T ss_pred EEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh-hhhccCCChHHhhhccchhhcCCc
Confidence 9999999999999999999999999999999875433 22344566 457899999877443
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=6.6e-92 Score=778.25 Aligned_cols=488 Identities=21% Similarity=0.301 Sum_probs=375.8
Q ss_pred cCCCeEEEEEEEEEEE--ecCCCee-EEEEEEcCCCCCCeEEeecCCEEEEEEEECC-CCCceeeeCCccCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVT--ASPLGDK-QQVIGINGQFPGPILNVTTNWNVVVNVKNDL-DEPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~--~~~~G~~-~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DGv 102 (595)
+.+.+++|+|++++.+ +.+||+. +++|+|||++|||+|+|++||+|+|+|+|+| +++++|||||+++.+++|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 3456899999999999 8999999 9999999999999999999999999999999 6899999999999989999999
Q ss_pred CC-CCCccCC-CCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCce-eEeeeccccccHHH
Q 007633 103 LG-TNCPIPA-GWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDI-TIFISDWYTKSHKK 179 (595)
Q Consensus 103 ~~-tq~~I~P-G~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~ 179 (595)
++ |||||+| |++|+|+|++ +|+||||||||.+.|+++||+|+|||++++. .+| |.|+ +|+|+||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~~---d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LPY---DIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CCC---cccceEEEEeccccCCHHH
Confidence 98 9999999 9999999999 5899999999999999999999999998764 233 7887 99999999998776
Q ss_pred HHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcc
Q 007633 180 LRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSY 259 (595)
Q Consensus 180 l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~ 259 (595)
+..... ....+.++.++|||+..++|.. .+..+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+
T Consensus 183 ~~~~~~-~~~~~~~d~~liNG~~~~~~~~-----~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 256 (559)
T 2q9o_A 183 LVHFTQ-NNAPPFSDNVLINGTAVNPNTG-----EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVP 256 (559)
T ss_dssp HHHHHT-TSCCCCBSEEEETTBCBCTTTC-----CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEE
T ss_pred Hhhhhh-cCCCCccceeEECCccccCcCC-----CCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcc
Confidence 643332 2234668999999999866532 2346899999999999999999999999999999999999999999
Q ss_pred eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEee--cccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCC--CCCc
Q 007633 260 TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASP--RFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPN--AYDT 335 (595)
Q Consensus 260 ~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~--~~~~ 335 (595)
++|..++++.|+|||||||+|++++.+| +|||++.. ...+. ........++|+|.++... +|..+. ..+.
T Consensus 257 ~~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~~----~P~~~~~~~~~~ 330 (559)
T 2q9o_A 257 VNAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPGG----LPTDEGTPPVDH 330 (559)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCCS----CCCCCCCCCCCC
T ss_pred cCceEeCeEEEccEEEEEEEEECCCCCC-cEEEEEEeccccccC-CCCCCceeEEEEECCCCCC----CCCCCCCcCCCc
Confidence 9999999999999999999999998777 99999986 32111 1123456899999865421 121110 0010
Q ss_pred ccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCC-CCCcHhhhhhcCCCCc
Q 007633 336 YFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLP-PSTPLMLAQQFNIPGA 414 (595)
Q Consensus 336 ~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~-~~~P~~~~~~~~~~~~ 414 (595)
. ..+. ..+.+..+.+.|...+. ...++++.+.... ..++...|+|||++|.. +..|++...+.+. ..
T Consensus 331 ~-~~~~-----~~l~p~~~~~~p~~~~~---~~~~~~~~~~~~~--~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~-~~ 398 (559)
T 2q9o_A 331 Q-CLDT-----LDVRPVVPRSVPVNSFV---KRPDNTLPVALDL--TGTPLFVWKVNGSDINVDWGKPIIDYILTGN-TS 398 (559)
T ss_dssp T-TCCC-----SCCCBSSCCBCCCTTCC---CCGGGEEEEEEEC--SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC-CC
T ss_pred c-cccc-----cccccCCCCCCCCcccc---cceeEEEEEEeec--CCCceEEEEECCEecccCCCCCcHhHhhcCC-cc
Confidence 0 1111 11222111112221110 1112334433211 12345789999999964 5678765433211 01
Q ss_pred cccCCCCCCCCCCCccceeEEecCC-CcEEEEEEEcCC----CccceeeecCceEEEEEEeC---------CccCCC-CC
Q 007633 415 YKLDFPYKLMSRAPKVDTSLINGTY-KGFMEIIFQNND----TTVQSYHMDGYAFFVVGMDF---------GVWTEN-SR 479 (595)
Q Consensus 415 ~~~~~~~~p~~~~~~~~~~v~~~~~-g~~ve~vi~N~~----~~~HP~HlHG~~F~Vl~~g~---------G~~~~~-~~ 479 (595)
| + .+.+++.++. +++++|+++|.+ .+.||||||||+||||+++. |.|++. +.
T Consensus 399 ~-------~------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~ 465 (559)
T 2q9o_A 399 Y-------P------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDL 465 (559)
T ss_dssp C-------C------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHG
T ss_pred C-------C------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccc
Confidence 1 1 1345666654 688999999976 67899999999999999988 777653 13
Q ss_pred CCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCCCCCCCCC--CC-ccccccCcc
Q 007633 480 GTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEIDKSAPLL--PD-NAIYCGLLS 556 (595)
Q Consensus 480 ~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~--p~-~~~~c~~~~ 556 (595)
..+|+.+|+|||||.|++++|++|||++||||.|||||||++|++.|||+.|.|... ..++..++ |+ ....|+.++
T Consensus 466 ~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~-~~~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 466 ARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA-DLRQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp GGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH-HHGGGCCHHHHHHHHHHHHHHH
T ss_pred cccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc-hhhhccccCCchhhhhhccccc
Confidence 458999999999999999999999999999999999999999999999998877533 23333444 54 567999886
Q ss_pred CC
Q 007633 557 SL 558 (595)
Q Consensus 557 ~~ 558 (595)
..
T Consensus 545 ~~ 546 (559)
T 2q9o_A 545 AY 546 (559)
T ss_dssp HH
T ss_pred cc
Confidence 64
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=3.1e-84 Score=698.66 Aligned_cols=403 Identities=20% Similarity=0.280 Sum_probs=326.1
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
..+++++|+|++++..++++|.++++|+|||++|||+|+|++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---
Confidence 45568999999999999999999999999999999999999999999999999999999999999875 5999987
Q ss_pred CccCCCCeEEEEEEEC-CceeeeEEccCc----chhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHH---
Q 007633 107 CPIPAGWNWTYQFQVK-DQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHK--- 178 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~-~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~--- 178 (595)
++|+||++|+|+|+++ +++||||||||. +.|+++||+|+|||+++.+.. +....++|++++++||+++...
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 5699999999999986 589999999996 589999999999999875321 1113488999999999987531
Q ss_pred --HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeec
Q 007633 179 --KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETE 256 (595)
Q Consensus 179 --~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~D 256 (595)
... .. .| ..++.++|||+.. |.++|++| +|||||+|+|..+.+.|+|+||+|+||++|
T Consensus 166 ~~~~~-~~-~g---~~~~~~~iNG~~~--------------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~D 225 (439)
T 2xu9_A 166 HTPMD-WM-NG---KEGDLVLVNGALR--------------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAAD 225 (439)
T ss_dssp CCHHH-HH-HC---CCCSEEEETTEES--------------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEET
T ss_pred CCccc-cc-cC---CCCCEEEECCccC--------------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecC
Confidence 010 00 11 3468999999987 88999999 999999999999999999999999999999
Q ss_pred Ccce-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC--------------CCCCcceEEEEEecCCCCC
Q 007633 257 GSYT-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS--------------EWNKVTGVAILHYSNSLGP 321 (595)
Q Consensus 257 G~~~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~--------------~~~~~~~~ail~y~~~~~~ 321 (595)
|.++ +|..++++.|+|||||||+|++++ +| +|+|++........ ........++++|.+...
T Consensus 226 G~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 302 (439)
T 2xu9_A 226 GGFLEEPLEVSELLLAPGERAEVLVRLRK-EG-RFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK- 302 (439)
T ss_dssp TEEEEEEEEESCEEECTTCEEEEEEECCS-SE-EEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC-
T ss_pred CCCCCCceEeceEEECCceeEEEEEEcCC-Cc-eEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc-
Confidence 9998 799999999999999999999997 77 89999865322110 001235678889976431
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCC
Q 007633 322 ASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPST 401 (595)
Q Consensus 322 ~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~ 401 (595)
..++|... ..... + +.+ ..+|++.+.... .+ ..|+|||++|.++..
T Consensus 303 -~~~~p~~l---------~~~~~----l------~~~---------~~~r~~~l~~~~----~g-~~~~iNg~~~~~~~~ 348 (439)
T 2xu9_A 303 -PLPLPKAL---------SPFPT----L------PAP---------VVTRRLVLTEDM----MA-ARFFINGQVFDHRRV 348 (439)
T ss_dssp -CCCCCSCC---------CCCCC----C------CCC---------SEEEEEEEEEEG----GG-TEEEETTBCCCTTCC
T ss_pred -cccCcccC---------CCccc----C------CCC---------CcceEEEEEeec----cC-ceEeECCEECCCCCC
Confidence 11222211 00000 0 111 124677765421 11 379999999854211
Q ss_pred cHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCC
Q 007633 402 PLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGT 481 (595)
Q Consensus 402 P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~ 481 (595)
+ +.++.|++++|+|+|.+.+.||||||||+||||+++.+.+
T Consensus 349 ~--------------------------------~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~------- 389 (439)
T 2xu9_A 349 D--------------------------------LKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF------- 389 (439)
T ss_dssp C--------------------------------EEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC-------
T ss_pred c--------------------------------eecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC-------
Confidence 1 3578899999999999889999999999999999976543
Q ss_pred CCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEe
Q 007633 482 YNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 482 ~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.+|.|||||.|+|++|++|||++||||.|+|||||++|++.|||..++|.
T Consensus 390 ---~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 390 ---PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp ---SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred ---CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 36899999999999999999999999999999999999999999999873
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=6.9e-84 Score=696.89 Aligned_cols=407 Identities=16% Similarity=0.162 Sum_probs=322.1
Q ss_pred CeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCc
Q 007633 30 PYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCP 108 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~ 108 (595)
.+++|+|++++.++++ +|..+++|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++..+ +||++ ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 3578999999999998 799999999999999999999999999999999999999999999998754 99998 899
Q ss_pred cCCCCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEeccCCCCCCCC--CCCCceeEeeeccccccHHHHHH
Q 007633 109 IPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPFA--VPDGDITIFISDWYTKSHKKLRK 182 (595)
Q Consensus 109 I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~d~e~~l~l~d~~~~~~~~l~~ 182 (595)
|+||++|+|+|++++++||||||||. +.|+++||+|+|||++++....+++ ..++|++|+++||+++...++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999996569999999997 7899999999999999765333222 25889999999999975543221
Q ss_pred HHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEE-eCCceeEEeecCcce-
Q 007633 183 DVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI-QNHNLLLVETEGSYT- 260 (595)
Q Consensus 183 ~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i-~gh~~~via~DG~~~- 260 (595)
...+.....+|.++|||+.. |.++|++| +|||||+|+|..+.+.|+| |||+|+||++||.++
T Consensus 173 -~~~~~~~~~~d~~liNG~~~--------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~ 236 (451)
T 2uxt_A 173 -NEPGSGGFVGDTLLVNGVQS--------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLP 236 (451)
T ss_dssp -CCCSSSCCCCSEEEETTEES--------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEE
T ss_pred -ccccCCCCcCCEEEECCccc--------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccC
Confidence 11222345689999999997 88999999 9999999999999999999 899999999999998
Q ss_pred eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC-------CCCCcceEEEEEecCCCCCCCCCCCCCCCCC
Q 007633 261 VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS-------EWNKVTGVAILHYSNSLGPASGPLPDPPNAY 333 (595)
Q Consensus 261 ~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~ 333 (595)
+|..++++.|+|||||||+|++++ ++ +|||++........ ........++++|........ +....|.
T Consensus 237 ~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p~-- 311 (451)
T 2uxt_A 237 APVSVKQLSLAPGERREILVDMSN-GD-EVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLPM-- 311 (451)
T ss_dssp EEEEESSEEECTTCEEEEEEECTT-CC-CEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS--
T ss_pred CceEeceEEECceeEEEEEEEeCC-CC-EEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCcc--
Confidence 799999999999999999999995 56 99999866432110 011133457888875431110 0000010
Q ss_pred CcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCC
Q 007633 334 DTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPG 413 (595)
Q Consensus 334 ~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~ 413 (595)
.+.+....+. ....++++.|. + .|+|||++|..+..
T Consensus 312 --------------~L~~~~~~~~--------~~~~~~~~~l~--------~--~~~iNg~~f~~~~~------------ 347 (451)
T 2uxt_A 312 --------------RLLPTEIMAG--------SPIRSRDISLG--------D--DPGINGQLWDVNRI------------ 347 (451)
T ss_dssp --------------CSSSSCCCCC--------CCSEEEEEEEC--------S--SSSBTTBCCCTTCC------------
T ss_pred --------------ccCCCCCCCC--------CCcceEEEEEe--------e--EEEECCEeCCCCCC------------
Confidence 0111100000 12345666553 1 59999999854211
Q ss_pred ccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEE
Q 007633 414 AYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTT 493 (595)
Q Consensus 414 ~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv 493 (595)
.+.++.|++++|+|+|. +.||||||||+||||++++. .+++.+|.|||||
T Consensus 348 --------------------~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~--------~~~~~~p~~rDTv 397 (451)
T 2uxt_A 348 --------------------DVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGA--------MPFPEDRGWKDTV 397 (451)
T ss_dssp --------------------CEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTB--------CCCGGGSSCBSEE
T ss_pred --------------------cEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCc--------CCCcccCCCccEE
Confidence 13568899999999997 68999999999999999632 2566789999999
Q ss_pred EeCCCcEEEEEEEecCcce----eEEeeccccceeccceEEEEEecCC
Q 007633 494 QVFPGAWTAILVYLDNAGI----WNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 494 ~v~p~g~~~irf~adNPG~----W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
.| +++++|+|++||||. |||||||++|++.|||..|+|...+
T Consensus 398 ~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 398 WV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp EE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred EE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 99 999999999999988 9999999999999999999998665
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=5.7e-82 Score=693.30 Aligned_cols=421 Identities=15% Similarity=0.162 Sum_probs=326.1
Q ss_pred eEEEEEEEEEEE--ecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCc
Q 007633 31 YVFYDWTISYVT--ASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCP 108 (595)
Q Consensus 31 ~~~~~l~~~~~~--~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~ 108 (595)
+++|+|++++.. +.+||..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. .++||++ ||+
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~~--~~~ 111 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSR--AAFDGWA--EDI 111 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCC--TTTTTCS--SSC
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCC--CCCCCCC--CCC
Confidence 578999999654 6788989999999999999999999999999999999999999999999886 4799986 899
Q ss_pred cCCCCeEEEEEEECCceeeeEEccCcc----hhhhcCceeeEEEeccCCCCCCCCC--CCCceeEeeeccccccHHHHHH
Q 007633 109 IPAGWNWTYQFQVKDQIGSFFYFPSLD----FQRAAGGYGGIIINNRDVIPLPFAV--PDGDITIFISDWYTKSHKKLRK 182 (595)
Q Consensus 109 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~l~d~~~~~~~~l~~ 182 (595)
|+||++|+|+|++.+++||||||||.. .|+++||+|+|||++++....+++. .+.|++|+|+||+++...++..
T Consensus 112 i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~ 191 (534)
T 3abg_A 112 TEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT 191 (534)
T ss_dssp BSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC
T ss_pred CCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec
Confidence 999999999999965689999999974 5889999999999998765444432 3678999999999875443211
Q ss_pred HHhCCC-CCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeC-------CceeEEe
Q 007633 183 DVENGV-DLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQN-------HNLLLVE 254 (595)
Q Consensus 183 ~~~~g~-~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~g-------h~~~via 254 (595)
..+. ....+|.++|||+.. +.++|++ ++|||||||+|..+.+.|+|++ |+|+||+
T Consensus 192 --~~~~~~~~~gd~~lvNG~~~--------------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa 254 (534)
T 3abg_A 192 --TNGELNSFWGDVIHVNGQPW--------------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA 254 (534)
T ss_dssp --CTTCSSCCCCSEEEETTEES--------------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE
T ss_pred --cCCCCccccCceeccCCccC--------------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEE
Confidence 1121 234579999999997 7899998 5999999999999999999987 9999999
Q ss_pred ecCcc-eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeeccc-CCC-CCCCcceEEEEEecCCCCCCCCCCCCCCC
Q 007633 255 TEGSY-TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFV-NSS-EWNKVTGVAILHYSNSLGPASGPLPDPPN 331 (595)
Q Consensus 255 ~DG~~-~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~lp~~p~ 331 (595)
+||.+ .+|..++++.|+|||||||+|++++.+|++|+|++..... +.. ........++++|.....+.. +. +
T Consensus 255 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~---~~-~- 329 (534)
T 3abg_A 255 SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQ---PD-T- 329 (534)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSC---SC-C-
T ss_pred eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcC---CC-C-
Confidence 99985 5799999999999999999999998777579999854211 100 001123458899975432100 00 0
Q ss_pred CCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCC
Q 007633 332 AYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNI 411 (595)
Q Consensus 332 ~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~ 411 (595)
.. .+..+.+. +.|.+. ...++++.+... ...|+|||++|.++..|.+
T Consensus 330 ------~~-----~P~~L~~~-~~p~~~-------~~~~~~~~~~~~-------~~~w~iNG~~f~~~~~p~l------- 376 (534)
T 3abg_A 330 ------SV-----VPANLRDV-PFPSPT-------TNTPRQFRFGRT-------GPTWTINGVAFADVQNRLL------- 376 (534)
T ss_dssp ------CC-----CCCCCCCC-SCCCCC-------CCCCEEEECSCC-------CSTTCCCCBTTBCTTSCCC-------
T ss_pred ------CC-----CccccccC-CCCCCc-------cccceEEEEecc-------CceeEECCcccCCCCCcce-------
Confidence 00 00011110 011111 134566665421 1369999999965433321
Q ss_pred CCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcc
Q 007633 412 PGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVAR 490 (595)
Q Consensus 412 ~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~r 490 (595)
+.++.|++++|+|+|.+. +.||||||||+||||+++.|.+.. ..+++.+ .||
T Consensus 377 -----------------------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~r 429 (534)
T 3abg_A 377 -----------------------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLK 429 (534)
T ss_dssp -----------------------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCB
T ss_pred -----------------------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCc
Confidence 246789999999999875 589999999999999997664421 1245556 899
Q ss_pred cEEEeCCCcEEEEEEE-ecCcceeEEeeccccceeccceEEEEEecCC
Q 007633 491 STTQVFPGAWTAILVY-LDNAGIWNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 491 DTv~v~p~g~~~irf~-adNPG~W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
|||.|+|++|++|||+ +||||.|+|||||++|++.|||..|+|...+
T Consensus 430 DTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 430 DVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp SEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 9999999999999998 8999999999999999999999999998776
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=8.3e-81 Score=683.80 Aligned_cols=428 Identities=17% Similarity=0.193 Sum_probs=323.3
Q ss_pred CeEEEEEEEEEEEecC--CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCC----------------------Cce
Q 007633 30 PYVFYDWTISYVTASP--LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDE----------------------PLL 85 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~--~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~----------------------~~~ 85 (595)
...+|+|++++.+... ++..+++|+|||++|||+|+|++||+|+|+|+|+|++ +++
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 4566999999988654 4578999999999999999999999999999999986 899
Q ss_pred eeeCCccCCCCCCCCCCCC---CCCccCCCCeE---EEEEEECCceeeeEEccCcc----hhhhcCceeeEEEeccCCCC
Q 007633 86 LTWNGVQHRKNSWQDGVLG---TNCPIPAGWNW---TYQFQVKDQIGSFFYFPSLD----FQRAAGGYGGIIINNRDVIP 155 (595)
Q Consensus 86 iH~HG~~~~~~~~~DGv~~---tq~~I~PG~~~---~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 155 (595)
|||||+++. +++||+++ +||+|+||++| +|+|++.+++||||||||.. .|+++||+|+|||+++.+.+
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999886 68999984 89999999555 99999866799999999974 58999999999999987644
Q ss_pred CCCCCCCCceeEeeeccccccHHHHHHHHh-----------CCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEec
Q 007633 156 LPFAVPDGDITIFISDWYTKSHKKLRKDVE-----------NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEP 224 (595)
Q Consensus 156 ~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~-----------~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~ 224 (595)
.+++..++|++|+|+||+++...++..... .......+|.++|||+.+ +.++|++
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--------------p~~~v~~ 247 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--------------PYLEVEP 247 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--------------CEEECCS
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc--------------ceEEecC
Confidence 444456889999999999875533211110 001234679999999998 7899988
Q ss_pred CcEEEEEEEEeCCCceeeEEEeCC-ceeEEeecCcce-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCC
Q 007633 225 GKTYRLRVHNVGISTSLNFRIQNH-NLLLVETEGSYT-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSS 302 (595)
Q Consensus 225 G~~~rlRliNag~~~~~~~~i~gh-~~~via~DG~~~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~ 302 (595)
+ +|||||||+|..+.+.|+|+|| +|+||++||.++ +|..++++.|+|||||||+|++++.+|..+.++.... +..
T Consensus 248 ~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~--~~~ 324 (513)
T 2wsd_A 248 R-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAG--CGG 324 (513)
T ss_dssp S-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCC--SSS
T ss_pred C-EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEeccc--ccc
Confidence 5 8999999999999999999999 999999999998 7999999999999999999999987773344433221 101
Q ss_pred CCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccc
Q 007633 303 EWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAEL 382 (595)
Q Consensus 303 ~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~ 382 (595)
........++++|..+...........|. .+.. .. ..+. .....+|++.|.... .
T Consensus 325 ~~~~~~~~~il~~~~~~~~~~~~~~~~p~------~l~~---~~-------~~~~-------~~~~~~~~~~l~~~~--~ 379 (513)
T 2wsd_A 325 DVNPETDANIMQFRVTKPLAQKDESRKPK------YLAS---YP-------SVQH-------ERIQNIRTLKLAGTQ--D 379 (513)
T ss_dssp SCCTTTTTEEEEEECCSCCSSCCCCCCCS------BCSC---CG-------GGCC-------CCEEEEEEEEEEEEE--C
T ss_pred cCCCCCCcceEEEEeccCcccCccCCCCc------cccC---CC-------Cccc-------CCCcceEEEEEEeec--C
Confidence 11112345789997543111000000110 0100 00 0000 012345666665422 2
Q ss_pred cCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCc
Q 007633 383 IEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGY 462 (595)
Q Consensus 383 ~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~ 462 (595)
..+...|+|||++|..+ . .+.++.|++++|+|+|.+.+.||||||||
T Consensus 380 ~~g~~~~~iNg~~~~~~---~------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~ 426 (513)
T 2wsd_A 380 EYGRPVLLLNNKRWHDP---V------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHLV 426 (513)
T ss_dssp TTSCEEEEETTBCTTSC---C------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESSC
T ss_pred CCCCceEeECCccCCCc---c------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCc
Confidence 23556799999988431 0 12457899999999999888999999999
Q ss_pred eEEEEEEeCC---ccCCCCCCCCCCC---------CCCcccEEEeCCCcEEEEEEEe-cCcceeEEeeccccceeccceE
Q 007633 463 AFFVVGMDFG---VWTENSRGTYNKW---------DGVARSTTQVFPGAWTAILVYL-DNAGIWNLRAENLDTWYLGQEV 529 (595)
Q Consensus 463 ~F~Vl~~g~G---~~~~~~~~~~n~~---------~p~~rDTv~v~p~g~~~irf~a-dNPG~W~~HCHil~H~~~GM~~ 529 (595)
+||||+++.+ .|++.. .+++. ++.|||||.|+|++++.|+|++ ||||.|+|||||++|++.|||.
T Consensus 427 ~F~Vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~ 504 (513)
T 2wsd_A 427 SFRVLDRRPFDIARYQESG--ELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMR 504 (513)
T ss_dssp CEEEEEEEEBCHHHHHHHC--CCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEE
T ss_pred eEEEEEecCcccccccccc--cccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCce
Confidence 9999999752 333221 12332 3469999999999999999999 8999999999999999999999
Q ss_pred EEEEecC
Q 007633 530 YVNVINP 536 (595)
Q Consensus 530 ~~~V~~~ 536 (595)
.++|..+
T Consensus 505 ~~~V~~~ 511 (513)
T 2wsd_A 505 PMDITDP 511 (513)
T ss_dssp EEEEBCC
T ss_pred eEEEeCC
Confidence 9999754
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=7.1e-80 Score=665.81 Aligned_cols=415 Identities=18% Similarity=0.189 Sum_probs=317.0
Q ss_pred cccCCCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC
Q 007633 25 CFGGDPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL 103 (595)
Q Consensus 25 ~~a~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 103 (595)
..+.+++++|+|++++.++++ +|..+++|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++ ++++||++
T Consensus 44 ~~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~--~~~~DG~p 121 (481)
T 3zx1_A 44 ESKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPV--PPDQDGSP 121 (481)
T ss_dssp CCCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCC--CGGGSCCT
T ss_pred cccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCccc--CCccCCCc
Confidence 345678899999999999987 699999999999999999999999999999999999999999999987 47899997
Q ss_pred CCCCccCCCCeEEEEEEECCc-eeeeEEccCc----chhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHH
Q 007633 104 GTNCPIPAGWNWTYQFQVKDQ-IGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHK 178 (595)
Q Consensus 104 ~tq~~I~PG~~~~Y~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~ 178 (595)
||+|+||++|+|+|+++++ +||||||||. +.|+++||+|+|||+++++...++ ++++ ++++||+++...
T Consensus 122 --q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g 195 (481)
T 3zx1_A 122 --HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENA 195 (481)
T ss_dssp --TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTS
T ss_pred --cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCC
Confidence 8999999999999999643 8999999995 689999999999999987643333 4455 999999987543
Q ss_pred HHHH-HHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecC
Q 007633 179 KLRK-DVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEG 257 (595)
Q Consensus 179 ~l~~-~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG 257 (595)
++.. ..........+|.++|||+.. |.++|++|+ ||||||+|..+.+.|+|+||+|+||++||
T Consensus 196 ~~~~~~~~~~~~g~~gd~~lvNG~~~--------------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DG 259 (481)
T 3zx1_A 196 QIPNNNLNDWLNGREGEFVLINGQFK--------------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDG 259 (481)
T ss_dssp CCCCCCHHHHHHCCCCSEEEETTEES--------------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETT
T ss_pred ccccccchhhccCCcCCEEEECCccC--------------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCC
Confidence 3210 000000123578999999987 899999998 99999999999999999999999999998
Q ss_pred cce-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCC-CCCcceEEEEEecCCCCCCCCCCCCCCCCCCc
Q 007633 258 SYT-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSE-WNKVTGVAILHYSNSLGPASGPLPDPPNAYDT 335 (595)
Q Consensus 258 ~~~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~ 335 (595)
.++ +|..++++.|+|||||||+|++++ ++ .|.+++......... ........+++..... .+.++|...
T Consensus 260 g~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~lP~~l----- 330 (481)
T 3zx1_A 260 GLIEKTIYKEELFLSPASRVEVLIDAPK-DG-NFKLESAYYDRDKMMVKEEPNTLFLANINLKK--ENVELPKNL----- 330 (481)
T ss_dssp EEEEEEEEESSEEECTTCEEEEEEECSS-CE-EEEEEECCCCCCCSSCCCCCCCEEEEEEEEEC--CCCCCCSCS-----
T ss_pred CccCCceEeCeEEECCccEEEEEEEcCC-Cc-EEEEEEecccccCccccCCCCceeEEEEecCC--CCccCCccc-----
Confidence 766 799999999999999999999984 55 799887543221000 0112233344443222 111222210
Q ss_pred ccccccccccccccccCCCCCCCCCCCCcCccceeEEEEEeccccc--cc--CCe--------EEEEecCeecCCCCCcH
Q 007633 336 YFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAE--LI--EGK--------WRTTLNGISYLPPSTPL 403 (595)
Q Consensus 336 ~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~--~~--~g~--------~~~~iNg~sf~~~~~P~ 403 (595)
.+....+. ...+|++.|...... .. .+. ..|+|||+.|.+. .
T Consensus 331 --------------~~~~~~~~---------~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~-~-- 384 (481)
T 3zx1_A 331 --------------KIFKPSEE---------PKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLK-R-- 384 (481)
T ss_dssp --------------CCCCCCCC---------CCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTT-C--
T ss_pred --------------cCCCCCCC---------CCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCCC-C--
Confidence 00000111 124566666432100 00 001 1399999887421 1
Q ss_pred hhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEe-CCccCCCCCCCC
Q 007633 404 MLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMD-FGVWTENSRGTY 482 (595)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g-~G~~~~~~~~~~ 482 (595)
..+.++.|++|+|+|.|.+.+.|||||||+.|+|+++. .|.- .
T Consensus 385 -----------------------------~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~-------~ 428 (481)
T 3zx1_A 385 -----------------------------IDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKV-------Q 428 (481)
T ss_dssp -----------------------------CCEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEE-------E
T ss_pred -----------------------------ceEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCC-------C
Confidence 12467899999999999989999999999999999983 2321 1
Q ss_pred CCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEe
Q 007633 483 NKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 483 n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
...++.|||||.|+|+++++|+|++||||.|+||||+++|++.|||..++|.
T Consensus 429 ~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 429 KAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp ECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred CcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 1235789999999999999999999999999999999999999999999996
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=7.6e-80 Score=664.33 Aligned_cols=385 Identities=17% Similarity=0.253 Sum_probs=301.8
Q ss_pred EEEcCC-CCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEc
Q 007633 53 IGINGQ-FPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYF 131 (595)
Q Consensus 53 ~~~Ng~-~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH 131 (595)
|+|||+ +|||+|++++||+|+|+|+|+|+++++|||||+++. +++||+++ |+|+||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 999999 999999999999999999999999999999999885 67999997 9999999999999997689999999
Q ss_pred cC----cchhhhcCceeeEEEeccCCCCCCCCCCC-CceeEeeeccccccHHHHHHH--HhCCCCCCCCCeEEEcCCCCC
Q 007633 132 PS----LDFQRAAGGYGGIIINNRDVIPLPFAVPD-GDITIFISDWYTKSHKKLRKD--VENGVDLGVPDGILINGLGPY 204 (595)
Q Consensus 132 ~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~d-~e~~l~l~d~~~~~~~~l~~~--~~~g~~~~~~d~~liNG~~~~ 204 (595)
|| ++.|+++||+|+|||++++.. .+++ +| +|++|+++||+++. .++... ...+.....+|.++|||+..
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~~- 179 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVKD- 179 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEET-
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCccc-
Confidence 99 789999999999999998764 2222 25 89999999999976 432110 00011124679999999997
Q ss_pred CCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEE--eC---CceeEEeecCccee-eeeeeEEEEeccceEEE
Q 007633 205 RYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI--QN---HNLLLVETEGSYTV-QQNYTNMDIHVGQSFSF 278 (595)
Q Consensus 205 ~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i--~g---h~~~via~DG~~~~-p~~~d~l~i~pGqR~dv 278 (595)
+.++|++| +|||||||+|..+.+.|+| +| |+|+||++||.+++ |..++++.|+|||||||
T Consensus 180 -------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dv 245 (448)
T 3aw5_A 180 -------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245 (448)
T ss_dssp -------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred -------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEE
Confidence 89999999 9999999999999999999 99 99999999999998 99999999999999999
Q ss_pred EEEeCCCCCcceEEEEeecccCCC----------CCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 007633 279 LVTTDQNASSDYYIVASPRFVNSS----------EWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWN 348 (595)
Q Consensus 279 lv~~~~~~g~~y~i~a~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~ 348 (595)
+|++++ + .|||++.......+ ........++++|.+.....+ |. .+.. ++
T Consensus 246 lv~~~~--~-~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~------~L~~---lp-- 305 (448)
T 3aw5_A 246 VVELGE--G-VYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE------ALSD---PP-- 305 (448)
T ss_dssp EEEECS--E-EEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC------CCSC---CC--
T ss_pred EEECCC--C-ceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc------ccCC---CC--
Confidence 999983 4 89999876432111 011234567788865432111 11 0100 00
Q ss_pred cccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCC
Q 007633 349 VSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAP 428 (595)
Q Consensus 349 l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~ 428 (595)
..+. ....++++.|... ...|+|||++|..+ .|.
T Consensus 306 -----~~~~--------~~~~~~~~~l~~~-------~~~~~iNg~~~~~~-~p~------------------------- 339 (448)
T 3aw5_A 306 -----PEPP--------KPTRTRRFALSLS-------GMQWTINGMFWNAS-NPL------------------------- 339 (448)
T ss_dssp -----CCCC--------CCSEEEEEEEEEE-------TTEEEETTBCCCTT-CTT-------------------------
T ss_pred -----CCCC--------CCCceEEEEEeCC-------CceeeECCCcCCCC-CCc-------------------------
Confidence 0011 1235677777541 12599999998532 111
Q ss_pred ccceeEEe-cCCCcEEEEEEEcCC-CccceeeecCceEEEEEEeCCccCC-CCCCCCC----CCCCCcccEEEeCCCcEE
Q 007633 429 KVDTSLIN-GTYKGFMEIIFQNND-TTVQSYHMDGYAFFVVGMDFGVWTE-NSRGTYN----KWDGVARSTTQVFPGAWT 501 (595)
Q Consensus 429 ~~~~~v~~-~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~G~~~~-~~~~~~n----~~~p~~rDTv~v~p~g~~ 501 (595)
+. ++.|++++|+|+|.+ .+.||||||||+||||+++ |.+.. .+...++ ..++.|||||.|+|++++
T Consensus 340 ------~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~ 412 (448)
T 3aw5_A 340 ------FEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETV 412 (448)
T ss_dssp ------CCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEE
T ss_pred ------eeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEE
Confidence 13 578999999999998 7899999999999999995 54431 1122233 234579999999999999
Q ss_pred EEE--EE---ecCcceeEEeeccccceeccceEEEEEe
Q 007633 502 AIL--VY---LDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 502 ~ir--f~---adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
+|+ |+ +||| |+|||||++|++.|||..|+|.
T Consensus 413 ~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 413 KIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 665 88 8999 9999999999999999999873
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.9e-78 Score=682.65 Aligned_cols=461 Identities=15% Similarity=0.087 Sum_probs=311.3
Q ss_pred CCeEEEEEEEEEEEec--CCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCC-----------------------
Q 007633 29 DPYVFYDWTISYVTAS--PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEP----------------------- 83 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~--~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~----------------------- 83 (595)
...+.|++++++.+.+ +++..+++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 3457788888887765 456778999999999999999999999999999999765
Q ss_pred ------------------ceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc----chhhhcC
Q 007633 84 ------------------LLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAG 141 (595)
Q Consensus 84 ------------------~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~G 141 (595)
++|||||+++. +++||++ ||+|+||++|+|+|++.+++||||||||. +.|+++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~G 185 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhcc
Confidence 67899999774 6899986 99999999999999996668999999995 6899999
Q ss_pred ceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHH--H------------hCC---CCCCCCCeEEEcCCCCC
Q 007633 142 GYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKD--V------------ENG---VDLGVPDGILINGLGPY 204 (595)
Q Consensus 142 l~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~--~------------~~g---~~~~~~d~~liNG~~~~ 204 (595)
|+|+|||+++++...+.+.+++|++|+|+||+++...++... + ..+ .....++.++|||+..
T Consensus 186 l~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~- 264 (612)
T 3gyr_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc-
Confidence 999999999876555556779999999999998754322110 0 000 1123468899999987
Q ss_pred CCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC-------ceeEEeecCccee-eeee------eEEEE
Q 007633 205 RYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH-------NLLLVETEGSYTV-QQNY------TNMDI 270 (595)
Q Consensus 205 ~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh-------~~~via~DG~~~~-p~~~------d~l~i 270 (595)
+.+.+++ ++|||||||+|..+.+.|+|++| +|+|||+||.+++ |+.+ ++|.|
T Consensus 265 -------------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i 330 (612)
T 3gyr_A 265 -------------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp -------------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred -------------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEe
Confidence 8888876 58999999999999999999998 4999999999984 6554 48999
Q ss_pred eccceEEEEEEeCCCCCcceEEEEeecccCCCC---CCCcceEEEEEecCCCCC--CCCCCCCCCCCCCccccccccccc
Q 007633 271 HVGQSFSFLVTTDQNASSDYYIVASPRFVNSSE---WNKVTGVAILHYSNSLGP--ASGPLPDPPNAYDTYFSMNQARSI 345 (595)
Q Consensus 271 ~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~---~~~~~~~ail~y~~~~~~--~~~~lp~~p~~~~~~~~~~~~~~~ 345 (595)
+|||||||+|++++.++..|+++.......... ........+++|...... ....+|...........
T Consensus 331 ~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~------- 403 (612)
T 3gyr_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMS------- 403 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCC-------
T ss_pred ccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccc-------
Confidence 999999999999987773444444322111110 112334456666543321 11112221100000000
Q ss_pred ccccccCCCCCCCCCCCCcCccceeEEEEEecccc-cccCCeEEEEecCeecC-CCCCcHhhhhh-cCCCC-ccccCCCC
Q 007633 346 RWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPA-ELIEGKWRTTLNGISYL-PPSTPLMLAQQ-FNIPG-AYKLDFPY 421 (595)
Q Consensus 346 ~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~-~~~~g~~~~~iNg~sf~-~~~~P~~~~~~-~~~~~-~~~~~~~~ 421 (595)
...+ ...+...+..... ........|.++..... ....+...... ....+ .+.
T Consensus 404 ---------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 460 (612)
T 3gyr_A 404 ---------HDIP---------HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKT----- 460 (612)
T ss_dssp ---------TTSC---------CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEE-----
T ss_pred ---------cccc---------cccccccccccccccccccccccccccccccccccccccceeeeccCCCcccc-----
Confidence 0000 0001111110000 00000111111111100 00000000000 00000 000
Q ss_pred CCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCC----------------CCCCCCC
Q 007633 422 KLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENS----------------RGTYNKW 485 (595)
Q Consensus 422 ~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~----------------~~~~n~~ 485 (595)
...++..+.+...+.++.|++|+|+|+|.+.+.||||||||+||||+++.+.+.... ....+..
T Consensus 461 ~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (612)
T 3gyr_A 461 YRRTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPN 540 (612)
T ss_dssp EEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTT
T ss_pred ccccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccc
Confidence 000111122233457789999999999999999999999999999998754433211 1234567
Q ss_pred CCCcccEEEeCCCcEEEEEEE-ecCcceeEEeeccccceeccceEEEEEecCCC
Q 007633 486 DGVARSTTQVFPGAWTAILVY-LDNAGIWNLRAENLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 486 ~p~~rDTv~v~p~g~~~irf~-adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~ 538 (595)
++.|||||.|++++|++|||+ +||||.|+|||||++|||+|||..|+|++|+.
T Consensus 541 ~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 541 ELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 789999999999999999998 79999999999999999999999999998864
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=7.7e-78 Score=649.54 Aligned_cols=417 Identities=19% Similarity=0.243 Sum_probs=309.0
Q ss_pred CCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCc
Q 007633 29 DPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCP 108 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~ 108 (595)
+..+.|+|++++.+++++|..+++|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||++ ||+
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~ 90 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGI 90 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TCC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cCc
Confidence 345789999999999999999999999999999999999999999999999999999999999886 5799997 899
Q ss_pred cCCCCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEeccCCCCCCCC--CCCCceeEeeeccccccHHHHHH
Q 007633 109 IPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPFA--VPDGDITIFISDWYTKSHKKLRK 182 (595)
Q Consensus 109 I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~d~e~~l~l~d~~~~~~~~l~~ 182 (595)
|+||++|+|+|++++++||||||||. +.|+++||+|+|||++++....+++ ...+|++++|+||+++.+.++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 99999999999996558999999996 6899999999999999765333332 23569999999999975433211
Q ss_pred HHh--CCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEE-eCCceeEEeecCcc
Q 007633 183 DVE--NGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI-QNHNLLLVETEGSY 259 (595)
Q Consensus 183 ~~~--~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i-~gh~~~via~DG~~ 259 (595)
..+ .......+|.++|||+.+ |.+.+ +|++|||||||+|..+.+.|+| +||+|+||++||.+
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~--------------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~ 235 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY--------------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGL 235 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS--------------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEE
T ss_pred cccccccccCCCCCEEEEcCCcC--------------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCc
Confidence 000 000124579999999987 66766 6689999999999999999999 69999999999998
Q ss_pred e-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCC-CCcceEEEEEecCCCCCCCCCCCCCCCCCCccc
Q 007633 260 T-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEW-NKVTGVAILHYSNSLGPASGPLPDPPNAYDTYF 337 (595)
Q Consensus 260 ~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~ 337 (595)
+ +|..++++.|+|||||||+|++++ .+ .|++++.......... .......+++......+.+..+|....
T Consensus 236 l~~P~~~~~l~l~pGeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~------ 307 (488)
T 3od3_A 236 LPEPVKVSELPVLMGERFEVLVEVND-NK-PFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLS------ 307 (488)
T ss_dssp EEEEEEESCEEECTTCEEEEEEEECT-TC-CEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCC------
T ss_pred ccCccEeceEEECCCCEEEEEEEeCC-Cc-eEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcccc------
Confidence 7 799999999999999999999995 45 8999875432111000 001122333332211111112222110
Q ss_pred ccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccc------------------ccc----------CCe---
Q 007633 338 SMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPA------------------ELI----------EGK--- 386 (595)
Q Consensus 338 ~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~------------------~~~----------~g~--- 386 (595)
.....+.. ....+|++.+..... ... +|.
T Consensus 308 -------------~~~~~~~~-------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 367 (488)
T 3od3_A 308 -------------SLPALPSL-------EGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNH 367 (488)
T ss_dssp -------------CCCCCCCC-------TTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCC
T ss_pred -------------cCCCCccc-------ccccceEEEEEecccccccccccccccccccccccccccccccccccCcccc
Confidence 00000000 011234554422100 000 010
Q ss_pred ----------EEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCC-Cccc
Q 007633 387 ----------WRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNND-TTVQ 455 (595)
Q Consensus 387 ----------~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~-~~~H 455 (595)
..|+|||++|... .| .+.++.|++++|.|.|.+ .+.|
T Consensus 368 ~~~g~~~~~~~~~~ING~~~~~~-~~-------------------------------~~~~~~G~~e~w~l~N~~~~~~H 415 (488)
T 3od3_A 368 MNHGGKFDFHHANKINGQAFDMN-KP-------------------------------MFAAAKGQYERWVISGVGDMMLH 415 (488)
T ss_dssp SCCCGGGCGGGCEEETTBCCCTT-CC-------------------------------SEECCBSSCEEEEEECTTCCCCE
T ss_pred ccccccccccceeeECCeeCCCC-CC-------------------------------ceEcCCCCEEEEEEEeCCCCCCc
Confidence 1389999988421 11 136789999999999987 5689
Q ss_pred eeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec----CcceeEEeeccccceeccceEEE
Q 007633 456 SYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD----NAGIWNLRAENLDTWYLGQEVYV 531 (595)
Q Consensus 456 P~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad----NPG~W~~HCHil~H~~~GM~~~~ 531 (595)
||||||++|+|++++..... ..++.|||||.|+ |+++.|+|++| |||.||||||+++|+|.|||..|
T Consensus 416 p~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f 486 (488)
T 3od3_A 416 PFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGF 486 (488)
T ss_dssp EEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEE
T ss_pred cEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEE
Confidence 99999999999998643222 1245799999999 99999999985 57899999999999999999999
Q ss_pred EE
Q 007633 532 NV 533 (595)
Q Consensus 532 ~V 533 (595)
+|
T Consensus 487 ~V 488 (488)
T 3od3_A 487 TV 488 (488)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=3.9e-76 Score=651.62 Aligned_cols=447 Identities=15% Similarity=0.132 Sum_probs=321.4
Q ss_pred CCeEEEEEEEEEEEecC--CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCC-----------------------
Q 007633 29 DPYVFYDWTISYVTASP--LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEP----------------------- 83 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~~--~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~----------------------- 83 (595)
+..++|+|++++.+... ++..+++|+|||++|||+|+|++||+|+|+++|+|++.
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 34688999999998764 45689999999999999999999999999999999863
Q ss_pred ------------------ceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcc----hhhhcC
Q 007633 84 ------------------LLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD----FQRAAG 141 (595)
Q Consensus 84 ------------------~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~G 141 (595)
+++||||+++. +.+||++ ||+|+||++|+|+|++.+++||||||||.. .|+++|
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~--~~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~G 185 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCC--CccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhcc
Confidence 89999999886 4589987 899999999999999966799999999975 499999
Q ss_pred ceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHH--HH-------HhC---C-C----CCCCCCeEEEcCCCCC
Q 007633 142 GYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLR--KD-------VEN---G-V----DLGVPDGILINGLGPY 204 (595)
Q Consensus 142 l~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~--~~-------~~~---g-~----~~~~~d~~liNG~~~~ 204 (595)
|+|+|||+++++.+.+++.+|+|++|+|+||+++.+.+.. .. +.. + . ....+|.++|||+.+
T Consensus 186 L~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~- 264 (612)
T 2g23_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC-
Confidence 9999999998764444556799999999999997542110 00 000 1 1 114579999999998
Q ss_pred CCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC-------ceeEEeecCccee-eeeee------EEEE
Q 007633 205 RYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH-------NLLLVETEGSYTV-QQNYT------NMDI 270 (595)
Q Consensus 205 ~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh-------~~~via~DG~~~~-p~~~d------~l~i 270 (595)
+.++|++| +|||||||+|..+.+.|+|++| +|+|||+||.+++ |..++ +|.|
T Consensus 265 -------------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 265 -------------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp -------------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred -------------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEE
Confidence 88999999 9999999999999999999999 8999999999994 99999 9999
Q ss_pred eccceEEEEEEeCCCCCcceEEEEeecccCCCCC---CCcceEEEEEecCCCC--CCCCCCCCCCCC-C-Cccccccccc
Q 007633 271 HVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEW---NKVTGVAILHYSNSLG--PASGPLPDPPNA-Y-DTYFSMNQAR 343 (595)
Q Consensus 271 ~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~---~~~~~~ail~y~~~~~--~~~~~lp~~p~~-~-~~~~~~~~~~ 343 (595)
+|||||||+|++++.+|++|+|+........+.. .......++++..... ..+..+|..-.. + .........+
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~ 410 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH 410 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccce
Confidence 9999999999999887868999876432111100 0011124555543221 112223321100 0 0000000000
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecc--cc------------cccCC-eEEEEecCeecCCCCCcHhhhhh
Q 007633 344 SIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNR--PA------------ELIEG-KWRTTLNGISYLPPSTPLMLAQQ 408 (595)
Q Consensus 344 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~--~~------------~~~~g-~~~~~iNg~sf~~~~~P~~~~~~ 408 (595)
.+. .+.+ |... +.....+++.+... .. ...+| ...|+|||+.|.+
T Consensus 411 r~~-~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~---------- 470 (612)
T 2g23_A 411 RLI-VLTP----PGTK-----GSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFND---------- 470 (612)
T ss_dssp EEE-EECC----TTCT-----TSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS----------
T ss_pred eEE-eecc----cccc-----ccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCC----------
Confidence 000 0000 0000 00000011111100 00 01122 2457777777632
Q ss_pred cCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccC---CC--------
Q 007633 409 FNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWT---EN-------- 477 (595)
Q Consensus 409 ~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~---~~-------- 477 (595)
...+.++.|++|+|.|.|.+.+.|||||||+.|+|++++.+.++ ..
T Consensus 471 -----------------------~~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~ 527 (612)
T 2g23_A 471 -----------------------GLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPV 527 (612)
T ss_dssp -----------------------CCCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCE
T ss_pred -----------------------CCceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCccccc
Confidence 12246789999999999998899999999999999998643221 10
Q ss_pred -----CCCCCCCCCCCcccEEEeCCCcEEEEEEEec-CcceeEEeeccccceeccceEEEEEecCC
Q 007633 478 -----SRGTYNKWDGVARSTTQVFPGAWTAILVYLD-NAGIWNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 478 -----~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad-NPG~W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
.....+..++.|||||.|+|+++++|+|++| |||.|||||||++|++.|||..|+|..++
T Consensus 528 ~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 528 RLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp EEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred ccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 0023455677899999999999999999999 99999999999999999999999998654
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=9.6e-58 Score=537.75 Aligned_cols=392 Identities=14% Similarity=0.137 Sum_probs=284.4
Q ss_pred hccccCCCeEEEEEEEEEEEe--cCC--------------------------CeeEEEE-------EEcCC--------C
Q 007633 23 NGCFGGDPYVFYDWTISYVTA--SPL--------------------------GDKQQVI-------GINGQ--------F 59 (595)
Q Consensus 23 ~~~~a~~~~~~~~l~~~~~~~--~~~--------------------------G~~~~~~-------~~Ng~--------~ 59 (595)
++..+.+.+|+|.+.|.+..+ +|. |..++++ .||+. +
T Consensus 13 ~~~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 92 (1065)
T 2j5w_A 13 CSTPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGF 92 (1065)
T ss_dssp -------CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTT
T ss_pred hccccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCC
Confidence 335556779999999999865 333 2334454 57877 9
Q ss_pred CCCeEEeecCCEEEEEEEECCCCCceeeeCCccCC----CCCCCCCCCC---CCCccCCCCeEEEEEEECCc--------
Q 007633 60 PGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHR----KNSWQDGVLG---TNCPIPAGWNWTYQFQVKDQ-------- 124 (595)
Q Consensus 60 PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~~~-------- 124 (595)
|||+||+++||+|+|+|+|+|+++++|||||++++ +.+|+||+++ |||+|+||++|+|+|+++++
T Consensus 93 PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~ 172 (1065)
T 2j5w_A 93 LGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDG 172 (1065)
T ss_dssp SCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSC
T ss_pred cCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCC
Confidence 99999999999999999999999999999999987 5588888884 79999999999999999754
Q ss_pred -eeeeEEccCcch--hhhcCceeeEEEeccCCCCCCCC-CCCCceeEeee------ccccccHHHHHHHH-hCCCC----
Q 007633 125 -IGSFFYFPSLDF--QRAAGGYGGIIINNRDVIPLPFA-VPDGDITIFIS------DWYTKSHKKLRKDV-ENGVD---- 189 (595)
Q Consensus 125 -~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~-~~d~e~~l~l~------d~~~~~~~~l~~~~-~~g~~---- 189 (595)
+||||||||.+. |+++||+|+|||++++....|.+ ..|+|++|+++ ||++... +.... +.+..
T Consensus 173 ~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~~ 250 (1065)
T 2j5w_A 173 NCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKDN 250 (1065)
T ss_dssp SEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTTC
T ss_pred CceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccccc
Confidence 599999999875 56899999999999876444432 45889999999 6666432 11111 11100
Q ss_pred C---CCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeee
Q 007633 190 L---GVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNY 265 (595)
Q Consensus 190 ~---~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~ 265 (595)
. ..++.++|||+.+ +..+.++|++|++|||||+|+|.. ..+.|||+||+|+ ++|..+
T Consensus 251 ~~~~~~~~~~~iNG~~~-----------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~ 311 (1065)
T 2j5w_A 251 EDFQQSNRMYSVNGYTF-----------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRI 311 (1065)
T ss_dssp HHHHHHTEEEEETTEET-----------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEE
T ss_pred ccccccCcEEEECCccC-----------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeee
Confidence 0 0235799999985 234789999999999999999986 6999999999999 356789
Q ss_pred eEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccccccc
Q 007633 266 TNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSI 345 (595)
Q Consensus 266 d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~ 345 (595)
|++.|+|||||||+|++++ +| +|+|+++...... ....+.++|.+...+.+.+.|..+. ...+ +.+++++
T Consensus 312 dtv~I~pGer~dVlv~~~~-pG-~y~i~~h~~~h~~-----~Gm~~~~~V~~~~~~~~~~~~~g~~--~~~~-~i~A~e~ 381 (1065)
T 2j5w_A 312 DTINLFPATLFDAYMVAQN-PG-EWMLSCQNLNHLK-----AGLQAFFQVQECNKSSSKDNIRGKH--VRHY-YIAAEEI 381 (1065)
T ss_dssp SEEEECBTCEEEEEEECCS-CE-EEEEEECSHHHHH-----TTCEEEEEEECSCCCCCCCCCTTSE--EEEE-EEEEEEE
T ss_pred cEEEECCCcEEEEEEEeCC-Ce-eEEEEecCcchhh-----CCCEEEEEEecCCCccccccccccc--eeEE-EEeceec
Confidence 9999999999999999996 77 9999998764322 3467888888765444444433311 1122 5678999
Q ss_pred ccccccCCC------CCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCC
Q 007633 346 RWNVSAGAA------RPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDF 419 (595)
Q Consensus 346 ~~~l~~~~~------~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~ 419 (595)
+|++.+... ++++++++ .+++ |.... ..++++.+..++ ++|. +++|+...
T Consensus 382 ~wdy~~~~~~~~~~~~~~~~~s~-------~~~~-l~~~~-~~ig~~y~k~v~-~~y~--------------d~~f~~~~ 437 (1065)
T 2j5w_A 382 IWNYAPSGIDIFTKENLTAPGSD-------SAVF-FEQGT-TRIGGSYKKLVY-REYT--------------DASFTNRK 437 (1065)
T ss_dssp EEESCTTSBCTTTCCBTTCTTCT-------THHH-HCCBT-TBCCSEEEEEEE-EEES--------------STTCCSBC
T ss_pred ccccCCCCcccccccccCCCccc-------chhh-hccCC-cccCceEeeeee-eccc--------------CCceEEcC
Confidence 999987754 44555542 1122 22222 246666666666 5653 23455433
Q ss_pred CCCCCCCCCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEE
Q 007633 420 PYKLMSRAPKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGM 469 (595)
Q Consensus 420 ~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~ 469 (595)
++.|..+....-.+++.++.|++++++|+|.....|+||+||+.|++++.
T Consensus 438 ~~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~ 487 (1065)
T 2j5w_A 438 ERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNE 487 (1065)
T ss_dssp CCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGC
T ss_pred cCCcccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccCC
Confidence 33232222233457899999999999999999999999999999998765
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=3.3e-53 Score=436.76 Aligned_cols=270 Identities=22% Similarity=0.307 Sum_probs=226.6
Q ss_pred CeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCC
Q 007633 30 PYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNC 107 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~ 107 (595)
.+++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++..++++||+++ +||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 3799999999999987 48889999999999999999999999999999999999999999999988889999998 999
Q ss_pred ccCCCCeEEEEEEECCceeeeEEccCcchhh---hcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHH
Q 007633 108 PIPAGWNWTYQFQVKDQIGSFFYFPSLDFQR---AAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~ 184 (595)
+|+||++++|+|++ +++||||||||.+.+. .+||+|+|||++++..+.+. ..|+|++++++||+++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---G 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---c
Confidence 99999999999999 5999999999987553 48999999999876432211 458999999999998633211 1
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce-eee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT-VQQ 263 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~-~p~ 263 (595)
..+.....++.++|||+.++. ...++|++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|.
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~-----------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~ 223 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPE-----------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPI 223 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEE
T ss_pred cCCCCCCcCcEEEEcCcCCCC-----------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCc
Confidence 112223457899999999732 2569999999999999999975 799999999999999999998 689
Q ss_pred eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCC-CCCcceEEEEEecCC
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSE-WNKVTGVAILHYSNS 318 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~-~~~~~~~ail~y~~~ 318 (595)
.+|++.|.||||++|+++++ .+| .|.++++........ .......++|+|.+.
T Consensus 224 ~~dtv~l~pger~~v~~~a~-~pG-~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 224 KGDTVLIGPGERYDVILNMD-NPG-LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EESEEEECTTCEEEEEEECC-SCS-EEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred cccEEEECCCCEEEEEEECC-CCe-eEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 99999999999999999999 578 999999875432210 011345689999864
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2e-55 Score=498.47 Aligned_cols=241 Identities=13% Similarity=0.159 Sum_probs=183.9
Q ss_pred EEEEEEEEEEecCC-CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCC----CCCCCCCCC---C
Q 007633 33 FYDWTISYVTASPL-GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHR----KNSWQDGVL---G 104 (595)
Q Consensus 33 ~~~l~~~~~~~~~~-G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~DGv~---~ 104 (595)
.-.+.+++...... |..+..|+ ++|||+|||++||+|+|+|+|+|+++++|||||+++. +.+++||++ .
T Consensus 48 ~k~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 48 KKTLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREK 124 (742)
T ss_dssp ECCCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSS
T ss_pred EEEEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCccccc
Confidence 33555555555554 66666664 8999999999999999999999999999999999874 455566655 3
Q ss_pred CCCccCCCCeEEEEEEECC---------ceeeeEEccCcch--hhhcCceeeEEEeccCCCCCCCCCCCCceeEeeec--
Q 007633 105 TNCPIPAGWNWTYQFQVKD---------QIGSFFYFPSLDF--QRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISD-- 171 (595)
Q Consensus 105 tq~~I~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d-- 171 (595)
|||+|+||++|+|+|++++ ++||||||||.+. |+++||+|+|||++++....+.....+|+++++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 7999999999999999953 4699999999875 89999999999999865432222224888888764
Q ss_pred ----cccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCc-eeeEEEe
Q 007633 172 ----WYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIST-SLNFRIQ 246 (595)
Q Consensus 172 ----~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~-~~~~~i~ 246 (595)
|+++........+........++.++|||+.+ +..+.++|++|++|||||+|+|... .|.|||+
T Consensus 205 e~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~-----------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlh 273 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVN-----------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLE 273 (742)
T ss_dssp CSSSSCCCCCC-------CCSCCCCCCCCEETTBCT-----------BCCCCCEECSSSCEEEECCCCCSSSCCCCCCCT
T ss_pred CCccccccccccccccCCCccccccCceEEECCccC-----------CCCcceEEcCCCEEEEEEEeCCCCCcceEEEEC
Confidence 55542211000011111112356789999986 2347899999999999999999875 7999999
Q ss_pred CCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeec
Q 007633 247 NHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPR 297 (595)
Q Consensus 247 gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~ 297 (595)
||.|+|++. .+|++.|.|||+++|++++++ +| .|.++++..
T Consensus 274 Gh~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~~~-pG-~w~~hCH~~ 314 (742)
T 2r7e_A 274 GHTFLVRNH--------RQASLEISPITFLTAQTLLMD-LG-QFLLFCHIS 314 (742)
T ss_dssp TCCCEETTE--------ECCSCCCCTTCCCEEEECCCS-CS-EECCCCCSS
T ss_pred CCEEEEEeE--------ecceEEeCCCcEEEEEEEeCC-Ce-eEEEEeCCh
Confidence 999999853 368889999999999999984 78 899988764
No 21
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=5.1e-52 Score=432.45 Aligned_cols=271 Identities=24% Similarity=0.418 Sum_probs=226.2
Q ss_pred CeEEEEEEEEEEEecCC-CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCC
Q 007633 30 PYVFYDWTISYVTASPL-GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNC 107 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~~-G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~ 107 (595)
.+++|+|++++..++++ |..+.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++..++|+||+++ +||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 36899999999999885 9999999999999999999999999999999999999999999999999899999998 999
Q ss_pred ccCCCCeEEEEEEECCceeeeEEccCcch--hhh-cCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHH
Q 007633 108 PIPAGWNWTYQFQVKDQIGSFFYFPSLDF--QRA-AGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~ 184 (595)
+|+||++|+|+|++ +++||||||||... |+. +||+|+|||+++.....+ ...|+|++++++||+...... ..
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~---~~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK---YG 156 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC---TT
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc---cC
Confidence 99999999999999 58999999999865 788 999999999987543222 134789999999998742111 00
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCccee-ee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV-QQ 263 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~-p~ 263 (595)
..+.....++.++|||+.++ ....+++++|++|||||+|++.. .+.|||+||.|+||+.||.+++ |.
T Consensus 157 ~~g~~~~~~~~~~ING~~~~-----------~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~ 224 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFP-----------LTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPY 224 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTT-----------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEE
T ss_pred CCCCCccccceEEEccccCC-----------CcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCc
Confidence 11122235789999999863 23569999999999999999964 9999999999999999999996 88
Q ss_pred eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCC-CCCCCcceEEEEEecCCC
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNS-SEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~-~~~~~~~~~ail~y~~~~ 319 (595)
.+|++.|.||||++|++++++ +| .|.++++...... +........++++|.+..
T Consensus 225 ~~dtv~l~pg~r~~v~~~~~~-pG-~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 225 YADTVLVSPGERYDVIIEADN-PG-RFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEECCCCEEEEEEEeCC-Ce-eEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 899999999999999999985 68 8999998654311 001123457999998653
No 22
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=3.7e-49 Score=408.92 Aligned_cols=262 Identities=21% Similarity=0.245 Sum_probs=222.5
Q ss_pred cCCCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC--CCceeeeCCccCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD--EPLLLTWNGVQHRKNSWQDGVL 103 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~ 103 (595)
..+.+++|+|++++..+++ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .++++||||+. .+||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCC
Confidence 4567899999999999988 799999999999999999999999999999999997 58999999995 368877
Q ss_pred CCCCccCCCCeEEEEEEECCceeeeEEccCc---chhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHH--
Q 007633 104 GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL---DFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHK-- 178 (595)
Q Consensus 104 ~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~-- 178 (595)
. +..|.||++++|+|++ +++||||||||. +.|+.+||+|+|||++++.. +.+|+|++++++||+++...
T Consensus 109 ~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~----p~~d~e~~l~~~d~~~~~~~~~ 182 (327)
T 1kbv_A 109 A-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL----PKVDKEFYIVQGDFYTKGKKGA 182 (327)
T ss_dssp T-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTTC
T ss_pred c-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCC----CCCceEEEEEeeeeeccCcccc
Confidence 5 2359999999999999 689999999996 68999999999999987532 24589999999999987421
Q ss_pred ------HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE
Q 007633 179 ------KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL 252 (595)
Q Consensus 179 ------~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v 252 (595)
.+.... ...++.++|||+.++++ ..+.+++++|++|||||+|+|....+.|||+||+|+|
T Consensus 183 ~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~v 248 (327)
T 1kbv_A 183 QGLQPFDMDKAV-----AEQPEYVVFNGHVGALT---------GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDK 248 (327)
T ss_dssp CEEECBCHHHHH-----HTCCSEEEETTSTTTTS---------GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSE
T ss_pred ccccccChhHhc-----cCCCceEEEcCcccCCC---------CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEE
Confidence 011111 13468999999998542 1267999999999999999999889999999999999
Q ss_pred EeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 253 VETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 253 ia~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
|+.||.+++|..++++.|+||||+||+|++++ +| .|+|+++...... .....++++|.+..
T Consensus 249 i~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG-~y~l~~h~~~~~~----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 249 VYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PG-NYTLVDHSIFRAF----NKGALGQLKVEGAE 309 (327)
T ss_dssp EEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CE-EEEEEESSTHHHH----HSSCEEEEEEESCC
T ss_pred EEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-Ce-EEEEEeccccccc----cCCcEEEEEECCCC
Confidence 99999999999999999999999999999995 68 9999998764321 13468999998654
No 23
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.1e-48 Score=423.64 Aligned_cols=401 Identities=17% Similarity=0.088 Sum_probs=264.8
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
+.+.+++++++++++....+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .++
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~----------~~~ 89 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA----------RSA 89 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE----------ECC
T ss_pred CCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc----------ccc
Confidence 444556666666654444444 456899999 999999999999999999998889999999732 157
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCCCCCC--C---CCCCCceeEeeeccccccH--HH
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLP--F---AVPDGDITIFISDWYTKSH--KK 179 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~--~---~~~d~e~~l~l~d~~~~~~--~~ 179 (595)
|+|+||++++|.|++. ++||||||||...|+.+||+|.|+|+++...... + .....+++..+ |+..... ..
T Consensus 90 ~~i~pG~~~~~~f~~~-~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~ 167 (447)
T 2dv6_A 90 IVNGKNASSTFSFVAS-KVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRID 167 (447)
T ss_dssp CBCSTTBEEEEEEECC-SCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEE
T ss_pred eecCCCCeEEEEEEcC-CCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEE
Confidence 9999999999999994 7999999999999999999999999987642210 0 00011111111 1111000 00
Q ss_pred HHH-HHhCCC-CCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCC-CceeeEEEeCCceeEEeec
Q 007633 180 LRK-DVENGV-DLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGI-STSLNFRIQNHNLLLVETE 256 (595)
Q Consensus 180 l~~-~~~~g~-~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~-~~~~~~~i~gh~~~via~D 256 (595)
+.. ...... .....+.++|||+.. .|.+++++|++|||||+|.+. ...+.+++||. ++.|
T Consensus 168 l~~~~~~~~~~~g~~~~~~~~NG~~p-------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~D 230 (447)
T 2dv6_A 168 LETVEVKGQLDDNTTYTYWTFNGKVP-------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPG 230 (447)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTBBS-------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGG
T ss_pred EEEEEEEEeccCCceeEEEEECCccC-------------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCC
Confidence 000 000000 112246789999863 288999999999999999986 34566777663 3679
Q ss_pred CcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcc
Q 007633 257 GSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTY 336 (595)
Q Consensus 257 G~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~ 336 (595)
|.+ +++.|.|||||++++++++ +| .||++++...... .......+.+.|.... ++|. ++.+
T Consensus 231 G~~------~~~~i~pG~~~~~~~~~~~-~G-~~~yh~h~~~~~~--~~~~Gl~g~l~v~~~~-----~~P~----~d~~ 291 (447)
T 2dv6_A 231 GAA------AFTQTDPGEETVVTFKALI-PG-IYVYHCATPSVPT--HITNGMYGLLLVEPEG-----GLPQ----VDRE 291 (447)
T ss_dssp GGG------GGCCBCTTCEEEEEEECCS-CE-EEEEECCSSSHHH--HHHTTCEEEEEEECTT-----CSCC----CSEE
T ss_pred CCC------ccEEeCCCCEEEEEEECCC-Ce-EEEEEeCCCChHH--HHhCCCEEEEEEeCCC-----CCCC----CCee
Confidence 874 2346999999999999985 57 9999997531100 0012345667775432 1232 1111
Q ss_pred cccccccccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccc
Q 007633 337 FSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYK 416 (595)
Q Consensus 337 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~ 416 (595)
..+.. -.|..... .... +.... .+... .......|.+||+.+...
T Consensus 292 ~~~~~---~~~~~~~~---~~~~-----g~~~~----~~~~~---~~~~~~~~~iNG~~~~~~----------------- 336 (447)
T 2dv6_A 292 FYVMQ---GEIYTVKS---FGTS-----GEQEM----DYEKL---INEKPEYFLFNGSVGSLT----------------- 336 (447)
T ss_dssp EEEEE---EEECBSSC---TTCC-----EECCB----BHHHH---HTTCCSEEEETTSTTCCC-----------------
T ss_pred EEEEe---cccccCCc---cccc-----ccccC----ChHHh---hccCCCEEEECCcccCCC-----------------
Confidence 11100 01110000 0000 00000 00000 001124688999876310
Q ss_pred cCCCCCCCCCCCccceeEEecCCCcEEEEEEEcCC-CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCC-cccEEE
Q 007633 417 LDFPYKLMSRAPKVDTSLINGTYKGFMEIIFQNND-TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGV-ARSTTQ 494 (595)
Q Consensus 417 ~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~-~rDTv~ 494 (595)
...++.++.|++++|+|.|.+ ...||||||||+|+||+.+.+. +..|. +|||+.
T Consensus 337 --------------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~----------~~~p~~~~dtv~ 392 (447)
T 2dv6_A 337 --------------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSV----------VSPPLIGVQTVS 392 (447)
T ss_dssp --------------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCS----------SSCCEEEESEEE
T ss_pred --------------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcc----------cCCCcccccEEE
Confidence 012457889999999999987 4679999999999999996432 12344 699999
Q ss_pred eCCCcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCC
Q 007633 495 VFPGAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 495 v~p~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~ 538 (595)
|+|++++.|+|++||||.|+||||+++|++.||++.++|..++.
T Consensus 393 l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 393 VPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp ECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred ECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 99999999999999999999999999999999999999976543
No 24
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=1.8e-47 Score=389.32 Aligned_cols=235 Identities=19% Similarity=0.226 Sum_probs=206.2
Q ss_pred CeEEEEEEEEEEEecCC-CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCC
Q 007633 30 PYVFYDWTISYVTASPL-GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNC 107 (595)
Q Consensus 30 ~~~~~~l~~~~~~~~~~-G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~ 107 (595)
.+++|+|++++.++++. |..+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++ ..++||+|+ +||
T Consensus 33 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~~ 109 (288)
T 3gdc_A 33 TLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGAG 109 (288)
T ss_dssp EEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTTC
T ss_pred cEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccce
Confidence 46899999999988764 9999999999999999999999999999999999999999999997 368999998 999
Q ss_pred ccCCCCeEEEEEEECCceeeeEEccCcc---hhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHH
Q 007633 108 PIPAGWNWTYQFQVKDQIGSFFYFPSLD---FQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDV 184 (595)
Q Consensus 108 ~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~ 184 (595)
+|+||++++|+|++ +++||||||||.. .|+.+||+|+|||++++.. ...|+|++|+++||+.++
T Consensus 110 ~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~-------- 176 (288)
T 3gdc_A 110 SIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG-------- 176 (288)
T ss_dssp SBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS--------
T ss_pred eECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC--------
Confidence 99999999999999 6999999999986 7999999999999997653 234799999999999861
Q ss_pred hCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCc-eeeEEEeCCceeEEeecCcceeee
Q 007633 185 ENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIST-SLNFRIQNHNLLLVETEGSYTVQQ 263 (595)
Q Consensus 185 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~-~~~~~i~gh~~~via~DG~~~~p~ 263 (595)
+ ..++.++|||+.+.+ ..+.+++++|++|||||+|+|... .|.|||+||.|+|++.++....|.
T Consensus 177 --g---~~~~~~~iNG~~~~~----------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~ 241 (288)
T 3gdc_A 177 --G---DDNEFYSVNGLPFHF----------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSE 241 (288)
T ss_dssp --T---TCCSEEEETTSTTHH----------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSE
T ss_pred --C---CCcceEEECcccccc----------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCc
Confidence 1 246899999998721 125799999999999999999654 799999999999998544433578
Q ss_pred eeeEEEEeccceEEEEEEeCCCCCcceEEEEeec
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPR 297 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~ 297 (595)
..|++.|.||||++|+++++ .+| .|.++++..
T Consensus 242 ~~Dtv~v~pg~~~~v~~~~~-~pG-~~~~hCH~~ 273 (288)
T 3gdc_A 242 YTDTISQVQGQRGILELRFP-YPG-KFMFHAHKT 273 (288)
T ss_dssp EESEEEEETTCEEEEEECCC-SCE-EEEEECSSH
T ss_pred eeeEEEeCCCceEEEEEECC-CCE-EEEEEecCh
Confidence 89999999999999999998 678 999999764
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.2e-48 Score=460.52 Aligned_cols=416 Identities=14% Similarity=0.113 Sum_probs=268.6
Q ss_pred eeEEEEEEcCCCCC--CeEEeecCCEEEEEEEECCCCCceeeeCCccCCC-CCCCCCCCC-CCCccCCCCeEEEEEEECC
Q 007633 48 DKQQVIGINGQFPG--PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRK-NSWQDGVLG-TNCPIPAGWNWTYQFQVKD 123 (595)
Q Consensus 48 ~~~~~~~~Ng~~Pg--P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~-~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~ 123 (595)
..+.+.++||++|| |+|++++||+|+++|.|. .+.+||||++|.+ +.++||++. | |+|.||.+++|+|++ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 56799999999999 889999999999999976 4569999999998 999999997 7 999999999999999 5
Q ss_pred ceeeeEEccCcchhhhcCceeeEEEeccCCCCCCCCCCCCceeEee----eccccccHHHHHHHH-h-CCCCCCCCCeEE
Q 007633 124 QIGSFFYFPSLDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFI----SDWYTKSHKKLRKDV-E-NGVDLGVPDGIL 197 (595)
Q Consensus 124 ~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l----~d~~~~~~~~l~~~~-~-~g~~~~~~d~~l 197 (595)
++||||||||.+.|+.+||+|.++|++......+...++.|.+++| +||++.....+...+ . .+. .|...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~---~p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ---NVSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---CCCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---Ccccee
Confidence 9999999999999999999999999987554444346678899999 899998655432211 1 122 166677
Q ss_pred EcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE----------EeecCcceeeeeeeE
Q 007633 198 INGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL----------VETEGSYTVQQNYTN 267 (595)
Q Consensus 198 iNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v----------ia~DG~~~~p~~~d~ 267 (595)
+|+... - + |++|++ ..-+.+.+|+|++ +++|| .+
T Consensus 768 ~n~~~~--------------~-i----G~tY~k---------~~y~~~~d~tft~~~~r~~~~~~v~~pG--------P~ 811 (1065)
T 2j5w_A 768 LDKGEF--------------Y-I----GSKYKK---------VVYRQYTDSTFRVPVERKAEEEHLGILG--------PQ 811 (1065)
T ss_dssp TCCTTT--------------C-C----CSEEEE---------EEEEEESSTTCCSBCCCCGGGGGGTTSC--------CC
T ss_pred ecCCCc--------------c-c----cceEee---------eEEEEEcCCcceecccCCccccccCCCC--------CE
Confidence 787653 1 2 899988 3446889999998 56666 47
Q ss_pred EEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccc----cccc
Q 007633 268 MDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSM----NQAR 343 (595)
Q Consensus 268 l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~----~~~~ 343 (595)
|.+.+|||+.|.++-+ .+. .|.|+.+...................|........+|.++.+. +..+-+ ...+
T Consensus 812 I~v~~Gd~v~v~l~N~-~~~-~~sih~HGl~~~~~~~~~i~PG~~~ty~~~~~~~~gp~~~~~~--~gt~wYhsh~~~~~ 887 (1065)
T 2j5w_A 812 LHADVGDKVKIIFKNM-ATR-PYSIHAHGVQTESSTVTPTLPGETLTYVWKIPERSGAGTEDSA--CIPWAYYSTVDQVK 887 (1065)
T ss_dssp EEEETTEEEEEEEEEC-SSS-CBCCEESSCBCSCSCCCCBCTTCEEEEEEECCGGGSCCTTSCS--EEEEEEECCTTHHH
T ss_pred EEEecCCEEEEEEEeC-CCC-CceEeeccccccCCCCceeCCCCeEEEEEEecCccCCccccCC--ceEEEEecCCChHH
Confidence 9999999999999754 444 8999887632111100011111122333221111122222221 111100 0000
Q ss_pred ccccccccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEe--cCeecCC-C-CCcHhhhhhcCCCCccccCC
Q 007633 344 SIRWNVSAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTL--NGISYLP-P-STPLMLAQQFNIPGAYKLDF 419 (595)
Q Consensus 344 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~i--Ng~sf~~-~-~~P~~~~~~~~~~~~~~~~~ 419 (595)
.+..-+... ....+.+.........+.++.+.... .+....|++ |+.+|.. | ..+++...+.. ...
T Consensus 888 q~~~GL~G~-liV~~~~~l~~~~~~~d~D~~l~~~~---~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~-~~~----- 957 (1065)
T 2j5w_A 888 DLYSGLIGP-LIVCRRPYLKVFNPRRKLEFALLFLV---FDENESWYLDDNIKTYSDHPEKVNKDDEEFIE-SNK----- 957 (1065)
T ss_dssp HHHTTCEEE-EEEECCC-----CCCCEEEEEEEEEE---EEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHH-HTE-----
T ss_pred hhhccccce-eEecCcccccccCCCcceEEEEEEEe---ecCCcceeeccCcccccCCccccCcchhhhhc-cCc-----
Confidence 100000000 00000000000001123334332210 111112332 3334431 1 11211100000 000
Q ss_pred CCCCCCCCCccceeEEecCCCcEEEEEEEcCC--CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCC
Q 007633 420 PYKLMSRAPKVDTSLINGTYKGFMEIIFQNND--TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFP 497 (595)
Q Consensus 420 ~~~p~~~~~~~~~~v~~~~~g~~ve~vi~N~~--~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p 497 (595)
....|+..+.....+.++.|++|+|+|.|.+ ...||||||||.|+|++++ |.+|||+.|+|
T Consensus 958 -~~~iNG~~~~~~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~p 1020 (1065)
T 2j5w_A 958 -MHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFP 1020 (1065)
T ss_dssp -EEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESEEEECT
T ss_pred -eEEECCccCCCCccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------CceeeEEEECC
Confidence 0112333333455678999999999999985 4689999999999998653 67899999999
Q ss_pred CcEEEEEEEecCcceeEEeeccccceeccceEEEEEecCCC
Q 007633 498 GAWTAILVYLDNAGIWNLRAENLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 498 ~g~~~irf~adNPG~W~~HCHil~H~~~GM~~~~~V~~~~~ 538 (595)
+++++|+|++||||.|+||||+++|++.|||..++|.+.+.
T Consensus 1021 g~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1021 GTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp TCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred CCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 99999999999999999999999999999999999987653
No 26
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=1.2e-45 Score=399.00 Aligned_cols=263 Identities=18% Similarity=0.206 Sum_probs=221.8
Q ss_pred ccCCCeEEEEEEEEEEEec-CCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC--CCceeeeCCccCCCCCCCCCC
Q 007633 26 FGGDPYVFYDWTISYVTAS-PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD--EPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 26 ~a~~~~~~~~l~~~~~~~~-~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv 102 (595)
.+.+.+++|+|++++.+++ +||..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+++ +||+
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 4566789999999999998 4899999999999999999999999999999999986 499999999964 6887
Q ss_pred CCCCCccCCCCeEEEEEEECCceeeeEEccC---cchhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHH-
Q 007633 103 LGTNCPIPAGWNWTYQFQVKDQIGSFFYFPS---LDFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHK- 178 (595)
Q Consensus 103 ~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H---~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~- 178 (595)
+.+ .+|+||++++|+|++ +++|||||||| ...|+.+||+|+|||++++.. +.+|+|++++++||++....
T Consensus 98 ~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 98 AES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Ccc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 752 369999999999999 68999999997 468999999999999987542 24589999999999987431
Q ss_pred -------HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCcee
Q 007633 179 -------KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLL 251 (595)
Q Consensus 179 -------~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~ 251 (595)
.+.. . ....++.++|||+.+.. ...+.+++++|++|||||+|+|....+.|||+||.|+
T Consensus 172 ~~~~~~~~~~~-~----~~~~~~~~liNG~~~~~---------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~ 237 (442)
T 2zoo_A 172 EAGLQPFDMAK-A----IDEDADYVVFNGSVGST---------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFD 237 (442)
T ss_dssp CCEEECBCHHH-H----HTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBS
T ss_pred ccccccCChhH-h----ccCCCCEEEECCCcCCC---------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEE
Confidence 0110 0 12467999999998621 0126899999999999999999988999999999999
Q ss_pred EEeecCcceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 252 LVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 252 via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
||+.||.+++|..++++.|.||||+||+|++++ +| .|+++++...... .....++++|.+..
T Consensus 238 vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G-~y~~~~~~~~~~~----~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 238 TVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV-PG-TFILVDHSIFRAF----NKGALAMLKVEGPD 299 (442)
T ss_dssp EEEGGGSSCEECSBSEEEECTTEEEEEEEECCS-CE-EEEEEESSTHHHH----TTSCEEEEEEESCC
T ss_pred EEecCCccCCCccceEEEECCCeeEEEEEEcCC-CC-eEEEEeccccccc----ccCceEEEEecCCC
Confidence 999999999999999999999999999999995 67 9999997654311 14568999998654
No 27
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=4e-45 Score=369.68 Aligned_cols=240 Identities=17% Similarity=0.206 Sum_probs=201.4
Q ss_pred cCCCeEEEEEEEEEEEecCCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTASPLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
+.+.+|+|+|+|++.. .+.....++.+||++|||+||+++||+|+|+|+|+|+++++|||||+++. .++||++.+|
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~--~~~DG~~~t~ 78 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 78 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccC--CccCCCcCCc
Confidence 4567899999999853 34444567889999999999999999999999999999999999999886 4799999899
Q ss_pred CccCCCCeEEEEEEECC------------ceeeeEEccCcc------hhhhcCceeeEEEeccCCCCCCCCCCCCceeEe
Q 007633 107 CPIPAGWNWTYQFQVKD------------QIGSFFYFPSLD------FQRAAGGYGGIIINNRDVIPLPFAVPDGDITIF 168 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~------------~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~ 168 (595)
|+|+||++|+|+|++++ ++||||||||.. .|+++||+|+|||++++.. .+|+|++++
T Consensus 79 ~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l~ 153 (276)
T 3kw8_A 79 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 153 (276)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEEE
Confidence 99999999999999963 379999999973 6999999999999998752 238999999
Q ss_pred eeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC
Q 007633 169 ISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH 248 (595)
Q Consensus 169 l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh 248 (595)
++|| +|||+.+. ..+.++++.|+++||||+|.+.. .+.||+|||
T Consensus 154 l~~~------------------------~iNG~~~~-----------~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~ 197 (276)
T 3kw8_A 154 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 197 (276)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred eccc------------------------ccceeccc-----------CCCCEEEecCCEEEEEEecCCCc-ceeEEEccc
Confidence 8765 89999862 35889999999999999999984 899999999
Q ss_pred ceeEEeecCccee----eeeeeEEEEeccceEEEEEEeCC--CCCcceEEEEeecccCCCCCCCcceEEEEEecCC
Q 007633 249 NLLLVETEGSYTV----QQNYTNMDIHVGQSFSFLVTTDQ--NASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 249 ~~~via~DG~~~~----p~~~d~l~i~pGqR~dvlv~~~~--~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~ 318 (595)
.|++++ ||.... +..+|++.|.|||++++++++++ ++| .|+++++...... ....+.+.+...
T Consensus 198 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG-~w~~HCH~~~H~~-----~GM~g~~~V~~~ 266 (276)
T 3kw8_A 198 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 266 (276)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred eeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCC-eEEEECCCchHhh-----CCCeEEEEEeCC
Confidence 999875 665432 45789999999999999999985 688 9999998653221 334566666543
No 28
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=3.1e-44 Score=373.48 Aligned_cols=269 Identities=19% Similarity=0.152 Sum_probs=209.9
Q ss_pred cccCCCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC
Q 007633 25 CFGGDPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL 103 (595)
Q Consensus 25 ~~a~~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 103 (595)
+.+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 345567899999999999987 5999999999999999999999999999999999 578999999987654555555
Q ss_pred C-CCCccCCCCeEEEEEEECCceeeeEEccCcc-----hhhhcCceeeEEEeccCCCC----CCCCCCCCceeEeeeccc
Q 007633 104 G-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD-----FQRAAGGYGGIIINNRDVIP----LPFAVPDGDITIFISDWY 173 (595)
Q Consensus 104 ~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~ 173 (595)
. + .|+||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .|. .+|+|++++++||+
T Consensus 103 ~~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 178 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHY 178 (333)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEEC
T ss_pred cee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeec
Confidence 4 5 49999999999999 5899999999986 69999999999999875432 122 45899999999999
Q ss_pred ccc--HHHH----------HHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCcee
Q 007633 174 TKS--HKKL----------RKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSL 241 (595)
Q Consensus 174 ~~~--~~~l----------~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~ 241 (595)
+.. ...+ ...++.. ....++.++|||+...+ ...+.++|++||+||||+.|++....+
T Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~---------~~~~~l~v~~Ger~Rl~n~~~~~~~~~ 248 (333)
T 1mzy_A 179 IPKDEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGAL---------TGEGALKAKVGDNVLFVHSQPNRDSRP 248 (333)
T ss_dssp CCBCTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSCBCE
T ss_pred cCccccccccccccccccccchhHHh-hccCCcEEEECCccccc---------CCCcceEecCCCEEEEEECCCCCcccc
Confidence 831 1110 0000100 12457999999998521 013679999999988776665443222
Q ss_pred eEEEeCCceeEEeecCcceee-e-eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccC-CCCCCCcceEEEEEecCC
Q 007633 242 NFRIQNHNLLLVETEGSYTVQ-Q-NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVN-SSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 242 ~~~i~gh~~~via~DG~~~~p-~-~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~-~~~~~~~~~~ail~y~~~ 318 (595)
..+++|.++|++ ||.++++ . .+|++.|.||||+||+|++++ +| +|+++++..... . ....++++|.+.
T Consensus 249 -h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG-~y~~~ch~~~h~~~-----~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 249 -HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PG-VYAYVNHNLIEAVH-----KGATAHVLVEGE 319 (333)
T ss_dssp -EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHHT-----TCCEEEEEEESC
T ss_pred -EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CE-EEEEecChhhhHhh-----CCCEEEEEEcCC
Confidence 237899999999 9999974 3 489999999999999999995 68 999999875432 2 456789999864
Q ss_pred C
Q 007633 319 L 319 (595)
Q Consensus 319 ~ 319 (595)
.
T Consensus 320 ~ 320 (333)
T 1mzy_A 320 W 320 (333)
T ss_dssp C
T ss_pred C
Confidence 3
No 29
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.1e-44 Score=377.59 Aligned_cols=268 Identities=21% Similarity=0.190 Sum_probs=207.4
Q ss_pred cCCCeEEEEEEEEEEEec--CCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC
Q 007633 27 GGDPYVFYDWTISYVTAS--PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG 104 (595)
Q Consensus 27 a~~~~~~~~l~~~~~~~~--~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 104 (595)
+.+.+++|+|++++..+. +||..+.+|+|||++|||+|+|++||+|+|+|+|.+. ++||||+++.+..++||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 355689999999998865 6699999999999999999999999999999999974 45666666665566777665
Q ss_pred -CCCccCCCCeEEEEEEECCceeeeEEccCc----chhhhcCceeeEEEeccCCCCCCC---CCCCCceeEeeecccccc
Q 007633 105 -TNCPIPAGWNWTYQFQVKDQIGSFFYFPSL----DFQRAAGGYGGIIINNRDVIPLPF---AVPDGDITIFISDWYTKS 176 (595)
Q Consensus 105 -tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~---~~~d~e~~l~l~d~~~~~ 176 (595)
++ |+||++++|+|++ +++||||||||. +.|+.+||+|+|||++++..+.+. ..+|+|++|+++||++..
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecc
Confidence 54 9999999999999 589999999996 379999999999999876432111 145889999999999842
Q ss_pred HH--HH----------HHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEE
Q 007633 177 HK--KL----------RKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFR 244 (595)
Q Consensus 177 ~~--~l----------~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~ 244 (595)
+. .+ ...++. .....++.++|||+..++| ..+.++|++|++||| +|++..+.+.|+
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~---------~~~~l~v~~GervRl--in~~~~~~~~~~ 249 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT---------GANALTAKVGETVLL--IHSQANRDTRPH 249 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS---------GGGCEEEETTCEEEE--EEEESSSCBCEE
T ss_pred ccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC---------CCcceEcCCCCEEEE--EecCCCCccceE
Confidence 11 11 000000 0124678999999997543 137899999997765 677766666655
Q ss_pred -EeCCceeEEeecCcceeee--eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 245 -IQNHNLLLVETEGSYTVQQ--NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 245 -i~gh~~~via~DG~~~~p~--~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
|+||.++|++ ||.+++|. .++++.|.+||||||+|++++ +| .|+++++...... .....++++|.+..
T Consensus 250 ~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG-~y~~~~h~~~~~~----~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 250 LIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PG-VYAYLNHNLIEAF----ELGAAGHIKVEGKW 320 (336)
T ss_dssp ETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred EECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-Cc-eEEEEechhhccc----cCCCeEEEEECCCC
Confidence 5999999998 99999764 468999999999999999996 78 9999998753210 13567899998654
No 30
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.5e-44 Score=371.83 Aligned_cols=243 Identities=17% Similarity=0.190 Sum_probs=201.3
Q ss_pred ccccCCCeEEEEEEEEEEEecCCCee-EEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC
Q 007633 24 GCFGGDPYVFYDWTISYVTASPLGDK-QQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 24 ~~~a~~~~~~~~l~~~~~~~~~~G~~-~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv 102 (595)
.+.+.+.++.++|.+. .-++|.. ..++..||++|||+|||++||+|+|+|+|+|+++++|||||+++. +.+||+
T Consensus 6 ~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~ 80 (313)
T 3tas_A 6 TAPAGGEVKRIKLYAE---RLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGT 80 (313)
T ss_dssp BCCCCCCEEEEEEEEE---ECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCS
T ss_pred cCCCCceEEEEEEEEE---EcCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCC
Confidence 3455667899999875 3456644 455678999999999999999999999999999999999999875 679999
Q ss_pred CCCCCccCCCCeEEEEEEEC------------CceeeeEEccCcc------hhhhcCceeeEEEeccCCCCCCCCCCCCc
Q 007633 103 LGTNCPIPAGWNWTYQFQVK------------DQIGSFFYFPSLD------FQRAAGGYGGIIINNRDVIPLPFAVPDGD 164 (595)
Q Consensus 103 ~~tq~~I~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e 164 (595)
+.+||+|+||++|+|+|++. +++||||||||.. .|+++||+|+|||+++.. ..+|+|
T Consensus 81 ~~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~-----~~~d~e 155 (313)
T 3tas_A 81 KQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-----VLPDRT 155 (313)
T ss_dssp TTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-----BCCSEE
T ss_pred ccccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc-----cccccc
Confidence 99999999999999999863 3689999999964 458899999999999865 245899
Q ss_pred eeEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEE
Q 007633 165 ITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFR 244 (595)
Q Consensus 165 ~~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~ 244 (595)
++|+++|| ++||+... ..+.++++.|++|||||+|+|. ..+.||
T Consensus 156 ~~l~~~d~------------------------t~Ng~~~~-----------~~~~l~v~~Ge~vr~~liN~g~-~~hpfH 199 (313)
T 3tas_A 156 HTIVFNDM------------------------TINNRPAH-----------TGPDFEATVGDRVEFVMITHGE-YYHTFH 199 (313)
T ss_dssp EEEEEETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESS-CCEEEE
T ss_pred ceeeccch------------------------hcccCCcc-----------cccccccccCCEEEEEEecccc-cceeee
Confidence 99999998 46777652 3478999999999999999996 489999
Q ss_pred EeCCceeEEeecCccee---eeeeeEEEEeccceEEEEEEeCC--CCCcceEEEEeecccCCCCCCCcceEEEEEecCC
Q 007633 245 IQNHNLLLVETEGSYTV---QQNYTNMDIHVGQSFSFLVTTDQ--NASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 245 i~gh~~~via~DG~~~~---p~~~d~l~i~pGqR~dvlv~~~~--~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~ 318 (595)
|+||.|++++.||.... |..+|++.|.||||++++|.+.+ .+| .|.++++...... ....+++.+...
T Consensus 200 lHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG-~w~~HCHi~~H~~-----~GM~~~f~V~~~ 272 (313)
T 3tas_A 200 LHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 272 (313)
T ss_dssp ETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred ecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCE-eEEEEeCChHHHH-----CCCeEEEEEECC
Confidence 99999999999987663 67899999999999999998764 478 8999998753322 335567777643
No 31
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=2e-44 Score=368.13 Aligned_cols=242 Identities=16% Similarity=0.175 Sum_probs=197.9
Q ss_pred cccCCCeEEEEEEEEEEEecCCC-eeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC
Q 007633 25 CFGGDPYVFYDWTISYVTASPLG-DKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL 103 (595)
Q Consensus 25 ~~a~~~~~~~~l~~~~~~~~~~G-~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~ 103 (595)
.++.+.++.|+|.+++.. +| ....++.+||++|||+|||++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 23 ~~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 23 VRAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp ----CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT
T ss_pred cccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCc
Confidence 356778999999998765 33 22344556999999999999999999999999999999999999774 6799998
Q ss_pred CCCCccCCCCeEEEEEEEC------------CceeeeEEccCcc------hhhhcCceeeEEEeccCCCCCCCCCCCCce
Q 007633 104 GTNCPIPAGWNWTYQFQVK------------DQIGSFFYFPSLD------FQRAAGGYGGIIINNRDVIPLPFAVPDGDI 165 (595)
Q Consensus 104 ~tq~~I~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~ 165 (595)
.+||+|+||++|+|+|+++ .++||||||||.. .|+++||+|+|||+++.. ..+|+|+
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~-----~~~d~e~ 172 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD-----LLPKRQF 172 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-----CCCSEEE
T ss_pred cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc-----cCccccc
Confidence 8999999999999999985 2689999999963 478999999999998764 2458999
Q ss_pred eEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEE
Q 007633 166 TIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRI 245 (595)
Q Consensus 166 ~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i 245 (595)
++++++|+ +||+... +.+.++++.||++||||+|++.. .+.|||
T Consensus 173 ~l~~~~~~------------------------~Ng~~~~-----------~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHl 216 (299)
T 3t9w_A 173 TVVFNDMM------------------------INNRAHH-----------DAPTFEANLGERVEWIAIGHGSN-FHTFHL 216 (299)
T ss_dssp EEEEETTE------------------------ETTCCTT-----------CCCEEEEETTCEEEEEEEEESSC-CCEEEE
T ss_pred eeeeeeee------------------------ecCcccc-----------ccccceecCCCEEEEEEEecccc-ceeeeE
Confidence 99998773 7888763 35889999999999999999975 789999
Q ss_pred eCCceeEEeecCccee---eeeeeEEEEeccceEEEEEEeCC--CCCcceEEEEeecccCCCCCCCcceEEEEEecCC
Q 007633 246 QNHNLLLVETEGSYTV---QQNYTNMDIHVGQSFSFLVTTDQ--NASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 246 ~gh~~~via~DG~~~~---p~~~d~l~i~pGqR~dvlv~~~~--~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~ 318 (595)
+||.|+++..|+.... +..+|++.|.||||++++|.+.+ .+| .|.++++...... ....+++.+...
T Consensus 217 HGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG-~w~~HCHi~~H~~-----~GM~~~f~V~~~ 288 (299)
T 3t9w_A 217 HGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG-MWMYHCHVQNHSD-----MGMAGMFLVRNA 288 (299)
T ss_dssp TTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred ecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCe-eEEEEcCCHHHHh-----cCCeEEEEEECC
Confidence 9999999998887664 34689999999999999997653 478 8999998754322 234566666543
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=6.2e-44 Score=372.43 Aligned_cols=268 Identities=17% Similarity=0.174 Sum_probs=205.9
Q ss_pred cccCCCeEEEEEEEEEEEec--CCCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC
Q 007633 25 CFGGDPYVFYDWTISYVTAS--PLGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV 102 (595)
Q Consensus 25 ~~a~~~~~~~~l~~~~~~~~--~~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv 102 (595)
..+.+.+++|+|++++..++ +||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +++||||+++.+....||.
T Consensus 32 ~~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~ 108 (340)
T 2bw4_A 32 AKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGG 108 (340)
T ss_dssp CSSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGG
T ss_pred ccCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCC
Confidence 35566789999999999877 559999999999999999999999999999999998 6799999988654444444
Q ss_pred CC-CCCccCCCCeEEEEEEECCceeeeEEccCcc----hhhhcCceeeEEEeccCCCC----CCCCCCCCceeEeeeccc
Q 007633 103 LG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD----FQRAAGGYGGIIINNRDVIP----LPFAVPDGDITIFISDWY 173 (595)
Q Consensus 103 ~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~ 173 (595)
.. + .|.||++++|+|++ +++||||||||.. .|+.+||+|+|||++++..+ .|. .+|+|++++++||+
T Consensus 109 ~~~~--~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 184 (340)
T 2bw4_A 109 GALT--QVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFY 184 (340)
T ss_dssp GGGC--CBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEEC
T ss_pred ccce--EeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeee
Confidence 43 5 49999999999999 5899999999975 79999999999999875321 122 45899999999999
Q ss_pred cc--cHHH----------HHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCcee
Q 007633 174 TK--SHKK----------LRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSL 241 (595)
Q Consensus 174 ~~--~~~~----------l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~ 241 (595)
+. .... .....+. .....++.++|||+.+.+ ...+.++|++|++|||++.|+ .+.+
T Consensus 185 ~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~---------~~~~~l~v~~G~r~Rl~n~~~--~~~~ 252 (340)
T 2bw4_A 185 VPKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL---------TGDHALTAAVGERVLVVHSQA--NRDT 252 (340)
T ss_dssp CCBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEES--SSCB
T ss_pred eccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc---------cCCCceEcCCCCEEEEEECCC--CCcc
Confidence 83 1111 1000110 012457899999999621 114889999999887665554 4444
Q ss_pred eE-EEeCCceeEEeecCcceee-e-eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc-cCCCCCCCcceEEEEEecC
Q 007633 242 NF-RIQNHNLLLVETEGSYTVQ-Q-NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF-VNSSEWNKVTGVAILHYSN 317 (595)
Q Consensus 242 ~~-~i~gh~~~via~DG~~~~p-~-~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~-~~~~~~~~~~~~ail~y~~ 317 (595)
.| ++++|.|+|++ ||.++.+ . .++++.|.||||+||+|++++ +| +|+++++... ... ....++++|.+
T Consensus 253 ~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG-~y~~~~h~~~~h~~-----~Gm~~~~~V~~ 324 (340)
T 2bw4_A 253 RPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PG-VYAYVNHNLIEAFE-----LGAAGHFKVTG 324 (340)
T ss_dssp CEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHHT-----TSCEEEEEEES
T ss_pred ceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-Ce-eeEEEcCchHHHHh-----CCCEEEEEECC
Confidence 43 48899999997 9998864 3 589999999999999999996 68 9999998753 211 34568899986
Q ss_pred CC
Q 007633 318 SL 319 (595)
Q Consensus 318 ~~ 319 (595)
..
T Consensus 325 ~~ 326 (340)
T 2bw4_A 325 EW 326 (340)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 33
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.3e-40 Score=346.14 Aligned_cols=238 Identities=17% Similarity=0.223 Sum_probs=196.0
Q ss_pred CCCeEEEEEEEEEEEecCCCeeEE-EEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 28 GDPYVFYDWTISYVTASPLGDKQQ-VIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~~~~G~~~~-~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
.+.+++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+++. .++||++.+|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 45679999999975 3554221 1234899999999999999999999999999999999999876 6899999889
Q ss_pred CccCCCCeEEEEEEECC------------ceeeeEEccCc------chhhhcCceeeEEEeccCCCCCCCCCCCCceeEe
Q 007633 107 CPIPAGWNWTYQFQVKD------------QIGSFFYFPSL------DFQRAAGGYGGIIINNRDVIPLPFAVPDGDITIF 168 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~ 168 (595)
|+|+||++++|+|++.. ++|+||||||. ..|+.+||+|+|||++++.. .+|+|++++
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEE
Confidence 99999999999999842 35999999996 47999999999999987652 248999999
Q ss_pred eeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC
Q 007633 169 ISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH 248 (595)
Q Consensus 169 l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh 248 (595)
++|| +|||+.++ ..+.+++++||+|||||+|.+. ..|.||||||
T Consensus 195 ~~d~------------------------~iNG~~~~-----------~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh 238 (343)
T 3cg8_A 195 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGH 238 (343)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTC
T ss_pred cccc------------------------eecccCCC-----------CCccEEeCCCCEEEEEEEcCCc-cccccEecCc
Confidence 9876 79999852 2478999999999999999997 5999999999
Q ss_pred ceeEEeecCccee----eeeeeEEEEeccceEEEEEEeC--CCCCcceEEEEeecccCCCCCCCcceEEEEEecCC
Q 007633 249 NLLLVETEGSYTV----QQNYTNMDIHVGQSFSFLVTTD--QNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNS 318 (595)
Q Consensus 249 ~~~via~DG~~~~----p~~~d~l~i~pGqR~dvlv~~~--~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~ 318 (595)
.|+|++ ||.+.. +...|++.|.|||+++++++++ +.+| .|+++++...... ....+.+.+...
T Consensus 239 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG-~w~~HCHi~~H~~-----~GM~g~~~V~~~ 307 (343)
T 3cg8_A 239 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 307 (343)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred EEEEec-cCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCe-eEEEeCCCHHHHh-----ccCcEEEEEecC
Confidence 999974 675543 3567999999999999999984 3678 9999998653221 345677777643
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=1.6e-40 Score=374.69 Aligned_cols=263 Identities=13% Similarity=0.142 Sum_probs=191.5
Q ss_pred CCCeEEEEEEEEEEEe--cCCC------------eeEEE--EEE----------------cCCCCCCeEEeecCCEEEEE
Q 007633 28 GDPYVFYDWTISYVTA--SPLG------------DKQQV--IGI----------------NGQFPGPILNVTTNWNVVVN 75 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~--~~~G------------~~~~~--~~~----------------Ng~~PgP~I~v~~Gd~v~v~ 75 (595)
.+.+|+|-+-|.+..+ +|.| ..+++ ..| |+++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 3567889888888765 4322 22333 223 44799999999999999999
Q ss_pred EEECCCCCceeeeCCccCCCCCCCCCCCC-C--------CCccCCCCeEEEEEEECCc-----ee----eeEEccCcc--
Q 007633 76 VKNDLDEPLLLTWNGVQHRKNSWQDGVLG-T--------NCPIPAGWNWTYQFQVKDQ-----IG----SFFYFPSLD-- 135 (595)
Q Consensus 76 v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-t--------q~~I~PG~~~~Y~f~~~~~-----~G----t~wYH~H~~-- 135 (595)
|+|.|+++++|||||+++. +++||+++ + ||+|+||++|+|+|+++++ +| |||||||..
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999885 68999996 6 8999999999999999754 57 999999984
Q ss_pred hhhhcCceeeEEEeccCCCCC--CCCCCCCceeEeee------ccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCC
Q 007633 136 FQRAAGGYGGIIINNRDVIPL--PFAVPDGDITIFIS------DWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYD 207 (595)
Q Consensus 136 ~q~~~Gl~G~liV~~~~~~~~--~~~~~d~e~~l~l~------d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~ 207 (595)
.|+.+||+|+|||++++.... ..+..++|++|+++ ||+++.................++.++|||+.+
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~---- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIY---- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSS----
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEec----
Confidence 799999999999999865321 11234689999999 788764322110000111123468999999985
Q ss_pred CCCCCCCCCceeEEEecCcEEEEEEEEeCCCc-eeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCCC
Q 007633 208 AAIVPDGIPYQLINVEPGKTYRLRVHNVGIST-SLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQNA 286 (595)
Q Consensus 208 ~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~~ 286 (595)
+.+.++|++|++|||||+|++... .|.||+|||.|+|++.|| ..+|++.|.||||+||+|++++ +
T Consensus 237 --------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~~-p 302 (647)
T 1sdd_B 237 --------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKASK-P 302 (647)
T ss_dssp --------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECCS-S
T ss_pred --------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEecc-c
Confidence 137899999999999999999864 899999999999999986 3679999999999999999995 6
Q ss_pred CcceEEEEeecccCCCCCCCcceEEEEEec
Q 007633 287 SSDYYIVASPRFVNSSEWNKVTGVAILHYS 316 (595)
Q Consensus 287 g~~y~i~a~~~~~~~~~~~~~~~~ail~y~ 316 (595)
| .|.++++...... ....+++.+.
T Consensus 303 G-~w~~hch~~~h~~-----~Gm~~~~~V~ 326 (647)
T 1sdd_B 303 G-WWLLDTEVGEIQR-----AGMQTPFLIV 326 (647)
T ss_dssp E-EEEEECCCHHHHT-----TTCEEEEEEE
T ss_pred e-EeecccCcccccc-----cccccceeee
Confidence 7 8999988753322 2334555554
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=6.3e-39 Score=347.12 Aligned_cols=258 Identities=18% Similarity=0.175 Sum_probs=212.6
Q ss_pred CCeEEEEEEEEEEEecC-CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC--CCceeeeCCccCCCCCCCCCCCC-
Q 007633 29 DPYVFYDWTISYVTASP-LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD--EPLLLTWNGVQHRKNSWQDGVLG- 104 (595)
Q Consensus 29 ~~~~~~~l~~~~~~~~~-~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DGv~~- 104 (595)
+.++.|+|++.+....+ +|....+|+|||++|||+|++++||+++|++.|.++ ..++|||||+. .+||++.
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc
Confidence 35678889888777766 588899999999999999999999999999999986 57999999985 3799875
Q ss_pred CCCccCCCCeEEEEEEECCceeeeEEccCcc---hhhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHH---
Q 007633 105 TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD---FQRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHK--- 178 (595)
Q Consensus 105 tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~--- 178 (595)
+ .|.||++++|.|++ +++|+||||||.. .|+.+||+|+|+|+++... +..|+|++++++||++....
T Consensus 236 ~--~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~----P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 T--QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGL----PQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp C--CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCS----CCCSEEEEEEEEEECBSSCTTCC
T ss_pred E--EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCC----CCCCeeEEEEecccccCCccccc
Confidence 4 39999999999999 5899999999964 7899999999999986532 24588999999999875210
Q ss_pred -----HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEE
Q 007633 179 -----KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLV 253 (595)
Q Consensus 179 -----~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~vi 253 (595)
.+.... + ..++.++|||+.+.++ ..+.+++++|++|||||+|++....|.|||+||.|+||
T Consensus 309 g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~---------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv 374 (447)
T 2dv6_A 309 GEQEMDYEKLI--N---EKPEYFLFNGSVGSLT---------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHV 374 (447)
T ss_dssp EECCBBHHHHH--T---TCCSEEEETTSTTCCC---------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEE
T ss_pred ccccCChHHhh--c---cCCCEEEECCcccCCC---------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEE
Confidence 011111 1 2468999999997432 12579999999999999999988899999999999999
Q ss_pred eecCcceeee--eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCC
Q 007633 254 ETEGSYTVQQ--NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSL 319 (595)
Q Consensus 254 a~DG~~~~p~--~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~ 319 (595)
+.||.+++|. .+|++.|.||||++|+|++++ +| .|+|+++...... ....++++|.+..
T Consensus 375 ~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG-~~~~hch~~~h~~-----~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 375 YSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR-AG-RYILVDHALSRLE-----HGLVGFLNVDGPK 435 (447)
T ss_dssp CGGGCSSSCCEEEESEEEECTTEEEEEEEECCS-CE-EEEEEESSGGGGG-----GTCCEEEEECSCS
T ss_pred EcCCcccCCCcccccEEEECCCcEEEEEEECCC-CE-EEEEEecCcCccc-----cCCEEEEEEeCCC
Confidence 9999998754 589999999999999999995 78 9999998765422 3457899997653
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.2e-41 Score=349.40 Aligned_cols=214 Identities=13% Similarity=0.163 Sum_probs=160.0
Q ss_pred EEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccC----CCCCCCCCCCC---CCCccCCCCeEEEEEEECC
Q 007633 51 QVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQH----RKNSWQDGVLG---TNCPIPAGWNWTYQFQVKD 123 (595)
Q Consensus 51 ~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~----~~~~~~DGv~~---tq~~I~PG~~~~Y~f~~~~ 123 (595)
..+++| ++|||+|+|++||+|+|+|+|.++++++|||||++. .+.+++||+++ .||+|+||++|+|+|++++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 345678 689999999999999999999999999999999984 34444444442 2799999999999999964
Q ss_pred c---------eeeeEEccCcch--hhhcCceeeEEEeccCCC---CCCCCCCCCceeEeeeccccccHHHHHHHHhCCCC
Q 007633 124 Q---------IGSFFYFPSLDF--QRAAGGYGGIIINNRDVI---PLPFAVPDGDITIFISDWYTKSHKKLRKDVENGVD 189 (595)
Q Consensus 124 ~---------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~g~~ 189 (595)
+ +||||||||.+. |+.+||+|+|||+++... +.+. ..|+|++++++||..... ..
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~--------~~-- 197 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS--------WN-- 197 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS--------SS--
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc--------cc--
Confidence 4 379999999775 889999999999987532 1121 458899999999853211 00
Q ss_pred CCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEE
Q 007633 190 LGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNM 268 (595)
Q Consensus 190 ~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l 268 (595)
...++.++|||+.+. ..|.+++++|++|||||+|+|.. ..+.||+|||.|.+ ||. .+|++
T Consensus 198 ~~~~~~~~ING~~~~-----------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dtv 258 (306)
T 1sdd_A 198 QTSSLMYTVNGYVNG-----------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISAI 258 (306)
T ss_dssp CCCCEEECSSSCCSS-----------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSCC
T ss_pred cCCCcceeeCCEecC-----------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----EcceE
Confidence 123678999999862 24789999999999999999986 57789999999985 873 48999
Q ss_pred EEeccceEEEEEEeCCCCCcceEEEEeec
Q 007633 269 DIHVGQSFSFLVTTDQNASSDYYIVASPR 297 (595)
Q Consensus 269 ~i~pGqR~dvlv~~~~~~g~~y~i~a~~~ 297 (595)
.|.||||++|+++++ .+| .|+++++..
T Consensus 259 ~l~pger~~v~~~~~-~pG-~~~~hch~~ 285 (306)
T 1sdd_A 259 TLVSATSTTANMTVS-PEG-RWTIASLIP 285 (306)
T ss_dssp CEETTCCBC---------C-CCCCBCCST
T ss_pred EECCCcEEEEEEEcC-CCe-EEEEEeCCh
Confidence 999999999999998 478 899988764
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=7.2e-41 Score=379.91 Aligned_cols=249 Identities=12% Similarity=0.140 Sum_probs=197.2
Q ss_pred CCCeEEEEEEEEEEEe--cCCCe---------------eEEE--EEE-cC---------------CCCCCeEEeecCCEE
Q 007633 28 GDPYVFYDWTISYVTA--SPLGD---------------KQQV--IGI-NG---------------QFPGPILNVTTNWNV 72 (595)
Q Consensus 28 ~~~~~~~~l~~~~~~~--~~~G~---------------~~~~--~~~-Ng---------------~~PgP~I~v~~Gd~v 72 (595)
.+.+|+|.+.|++... +|+|. .+++ +.| |+ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 4568999999999874 67653 2333 223 33 579999999999999
Q ss_pred EEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECC---------ceeeeEEccCcch--hhhcC
Q 007633 73 VVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKD---------QIGSFFYFPSLDF--QRAAG 141 (595)
Q Consensus 73 ~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~--q~~~G 141 (595)
+|+|+|.|+++++|||||+++..+.. ||++++||+|+||++|+|+|++++ ++||||||||.+. |+++|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999987654 799999999999999999999975 8999999999875 89999
Q ss_pred ceeeEEEeccCCCCC--CCCCCCCceeEeeec------cccccHHHHHHHHhCCC-----C---CCCCCeEEEcCCCCCC
Q 007633 142 GYGGIIINNRDVIPL--PFAVPDGDITIFISD------WYTKSHKKLRKDVENGV-----D---LGVPDGILINGLGPYR 205 (595)
Q Consensus 142 l~G~liV~~~~~~~~--~~~~~d~e~~l~l~d------~~~~~~~~l~~~~~~g~-----~---~~~~d~~liNG~~~~~ 205 (595)
|+|+|||++++.... .....++|++|++++ ||++... ........ + ....+.++|||+.+
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~--~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~-- 364 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENM--ERNCRAPCNIQMEDPTFKENYRFHAINGYIM-- 364 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGG--SSCSCCSSCCCSSSSSSTTTSCEECTTSCTT--
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccch--hhcccCccccccCCccccccCCccccCCccC--
Confidence 999999999865321 112457899888753 5554221 11110000 0 01235689999986
Q ss_pred CCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCC
Q 007633 206 YDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQ 284 (595)
Q Consensus 206 ~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~ 284 (595)
+..+.++|++|++|||||+|+|.. ..|.||||||.|+|++.||. .+|++.|.||||++|++++++
T Consensus 365 ---------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~ 430 (770)
T 2r7e_B 365 ---------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK 430 (770)
T ss_dssp ---------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS
T ss_pred ---------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC
Confidence 234789999999999999999975 47999999999999999974 689999999999999999984
Q ss_pred CCCcceEEEEeec
Q 007633 285 NASSDYYIVASPR 297 (595)
Q Consensus 285 ~~g~~y~i~a~~~ 297 (595)
+| .|.++++..
T Consensus 431 -pG-~w~~hcH~~ 441 (770)
T 2r7e_B 431 -AG-IWRVECLIG 441 (770)
T ss_dssp -CB-CCCBCCCSH
T ss_pred -CC-ceEEEeccc
Confidence 67 899988764
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=8.1e-37 Score=346.24 Aligned_cols=216 Identities=15% Similarity=0.175 Sum_probs=169.7
Q ss_pred CCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCC-----CCC-CCCccCCCCeEEEEEEECCcee-----
Q 007633 58 QFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDG-----VLG-TNCPIPAGWNWTYQFQVKDQIG----- 126 (595)
Q Consensus 58 ~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG-----v~~-tq~~I~PG~~~~Y~f~~~~~~G----- 126 (595)
.+|||+||+++||+|+|+|+|.++++++|||||+++. ++|+|| ++. +||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999874 577765 455 7999999999999999976554
Q ss_pred ----eeEEccCcc--hhhhcCceeeEEEeccCCCC-CC-CCCCCCceeEeeec------cccccHHHHHHHHhCCCCC--
Q 007633 127 ----SFFYFPSLD--FQRAAGGYGGIIINNRDVIP-LP-FAVPDGDITIFISD------WYTKSHKKLRKDVENGVDL-- 190 (595)
Q Consensus 127 ----t~wYH~H~~--~q~~~Gl~G~liV~~~~~~~-~~-~~~~d~e~~l~l~d------~~~~~~~~l~~~~~~g~~~-- 190 (595)
|||||||.. .|+++||+|+|||+++.... .. ....|+|++|++++ ||+.. .+..+.......
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v~~ 604 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGVQL 604 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCSCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeecccccccccccc--chhhcccCchhccc
Confidence 999999976 47899999999999875321 11 12558999999965 55431 222221100000
Q ss_pred C------CCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeee
Q 007633 191 G------VPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQ 263 (595)
Q Consensus 191 ~------~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~ 263 (595)
. ....++|||+.+. ..+ +++++|++|||||+|+|.. ..|.|||+||.|+|+ +.
T Consensus 605 ~~~~~~~~~~~~~ING~~~~-----------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~ 664 (742)
T 2r7e_A 605 EDPEFQASNIMHSINGYVFD-----------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MV 664 (742)
T ss_dssp CCHHHHGGGCCBCTTTTCSS-----------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SS
T ss_pred ccccccccCceeeecCcCCC-----------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------cc
Confidence 0 0124789999861 223 8999999999999998875 468999999999987 46
Q ss_pred eeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 264 NYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 264 ~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
.+|++.|.||||++|+++++ .+| .|.++++...
T Consensus 665 ~~Dtv~l~Pg~~~~v~~~ad-~pG-~w~~hcH~~~ 697 (742)
T 2r7e_A 665 YEDTLTLFPFSGETVFMSME-NPG-LWILGCHNSD 697 (742)
T ss_dssp SBCSSCCCCCSSEECCEECC-CCC-CSCCEECCCS
T ss_pred ceeEEEECCCcEEEEEEEcC-CCe-EEEEEeCCch
Confidence 78999999999999999998 568 9999998754
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.95 E-value=7.1e-28 Score=244.79 Aligned_cols=231 Identities=15% Similarity=0.117 Sum_probs=163.2
Q ss_pred CCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEec
Q 007633 193 PDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 193 ~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~p 272 (595)
...+++||+.. .|.|++++|+++++|+.|.... .+.+|+||.. ..+.||.+. .+...|.|
T Consensus 54 ~~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~P 113 (288)
T 3gdc_A 54 FKGWSYNGRIP-------------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAP 113 (288)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCT
T ss_pred EEEEEECCccC-------------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECC
Confidence 35899999874 3899999999999999999875 7889999975 457899764 24457899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAG 352 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~ 352 (595)
||++++.++++ .+| .||.+++....... ......+.|.+..... .+. . +
T Consensus 114 G~~~~y~f~~~-~~G-t~~yH~H~~~~~~~--~~~Gl~G~liV~~~~~-----~~~--~--d------------------ 162 (288)
T 3gdc_A 114 GQSFTYEFDAT-PFG-THLYHCHQSPLAPH--IAKGLYGGFIVEPKEG-----RPP--A--D------------------ 162 (288)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCCSSHHHH--HHTTCEEEEEEECSSC-----CCC--C--S------------------
T ss_pred CCEEEEEEEcC-CCc-cEEEEecCcchHHH--HhCcCeEEEEEeCCcc-----CCC--C--c------------------
Confidence 99999999996 678 99999987421000 0012233333332110 010 0 1
Q ss_pred CCCCCCCCCCCcCccceeEEEEEeccc-cc-ccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCcc
Q 007633 353 AARPNPQGSFKYGQITVTDVYVILNRP-AE-LIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKV 430 (595)
Q Consensus 353 ~~~p~p~~~~~~~~~~~~~~~~l~~~~-~~-~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 430 (595)
+++.+.... .. .......|+|||+.|.. .
T Consensus 163 ------------------~e~~l~~~d~~~~~g~~~~~~~iNG~~~~~-----~-------------------------- 193 (288)
T 3gdc_A 163 ------------------DEMVMVMNGYNTDGGDDNEFYSVNGLPFHF-----M-------------------------- 193 (288)
T ss_dssp ------------------EEEEEEEEEECCSSTTCCSEEEETTSTTHH-----H--------------------------
T ss_pred ------------------ceEEEEEeeEecCCCCCcceEEECcccccc-----c--------------------------
Confidence 111111100 00 00012368899987621 0
Q ss_pred ceeEEecCCCcEEEEEEEcCCC--ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec
Q 007633 431 DTSLINGTYKGFMEIIFQNNDT--TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD 508 (595)
Q Consensus 431 ~~~v~~~~~g~~ve~vi~N~~~--~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad 508 (595)
...+.++.|+.|+|.+.|.+. ..|||||||+.|+|++.+. .+..+.++||+.|+||++..|+|+++
T Consensus 194 -~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~-----------~~~~~~~~Dtv~v~pg~~~~v~~~~~ 261 (288)
T 3gdc_A 194 -DFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGT-----------MLTPSEYTDTISQVQGQRGILELRFP 261 (288)
T ss_dssp -HSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTC-----------CSSCSEEESEEEEETTCEEEEEECCC
T ss_pred -CcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCC-----------ccCCCceeeEEEeCCCceEEEEEECC
Confidence 012467899999999999875 3599999999999986432 12345789999999999999999999
Q ss_pred CcceeEEeeccccceeccceEEEEEec
Q 007633 509 NAGIWNLRAENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 509 NPG~W~~HCHil~H~~~GM~~~~~V~~ 535 (595)
+||.|+||||+++|++.|||..++|.+
T Consensus 262 ~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 262 YPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp SCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred CCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 999999999999999999999999863
No 40
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.94 E-value=4.8e-27 Score=244.06 Aligned_cols=215 Identities=15% Similarity=0.144 Sum_probs=153.5
Q ss_pred ceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCC-----------
Q 007633 217 YQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQN----------- 285 (595)
Q Consensus 217 ~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~----------- 285 (595)
.|+|++++|+++|+||+|.... .+.+|.||..+. .+.||.++ +...|.|||+++..++++++
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 4999999999999999999975 566888888777 68899874 34568999999999998754
Q ss_pred -CCcceEEEEeecccCC---CCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCC
Q 007633 286 -ASSDYYIVASPRFVNS---SEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGS 361 (595)
Q Consensus 286 -~g~~y~i~a~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~ 361 (595)
+| .||.+.+...... .....+.+.-|++.....
T Consensus 149 ~~G-t~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~------------------------------------------ 185 (343)
T 3cg8_A 149 SAG-YWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV------------------------------------------ 185 (343)
T ss_dssp SCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC------------------------------------------
T ss_pred Cce-EEEEecCccccccchhhhhcCCeEEEEEecCCCC------------------------------------------
Confidence 23 5656654321100 000112222233221100
Q ss_pred CCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCc
Q 007633 362 FKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKG 441 (595)
Q Consensus 362 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~ 441 (595)
..++++.+... .|+|||+.|.. ...+.++.|+
T Consensus 186 ------~pd~e~~l~~~---------d~~iNG~~~~~---------------------------------~~~l~v~~Ge 217 (343)
T 3cg8_A 186 ------LPDATHTIVFN---------DMTINNRKPHT---------------------------------GPDFEATVGD 217 (343)
T ss_dssp ------CCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEETTC
T ss_pred ------CCCceEEEEcc---------cceecccCCCC---------------------------------CccEEeCCCC
Confidence 01133433321 27889876511 1235789999
Q ss_pred EEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe---cCcceeEEeec
Q 007633 442 FMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL---DNAGIWNLRAE 518 (595)
Q Consensus 442 ~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a---dNPG~W~~HCH 518 (595)
+|+|+|.|.+...||||||||.|+|+. .|.+.. ....+.++||+.|+|+++..++|++ ||||.|+||||
T Consensus 218 ~vri~l~N~g~~~HpfHlHGh~f~v~~--~G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCH 289 (343)
T 3cg8_A 218 RVEIVMITHGEYYHTFHMHGHRWADNR--TGILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCH 289 (343)
T ss_dssp EEEEEEEEESSCCEEEEETTCCEESSS--SSSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEEC
T ss_pred EEEEEEEcCCccccccEecCcEEEEec--cCcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCC
Confidence 999999999889999999999999864 343321 1123568999999999999999995 89999999999
Q ss_pred cccceeccceEEEEEecCC
Q 007633 519 NLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 519 il~H~~~GM~~~~~V~~~~ 537 (595)
+++|++.|||..++|.+++
T Consensus 290 i~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 290 VQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp SHHHHHTTCEEEEEEECTT
T ss_pred CHHHHhccCcEEEEEecCC
Confidence 9999999999999998764
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.94 E-value=1.3e-26 Score=240.93 Aligned_cols=247 Identities=17% Similarity=0.144 Sum_probs=163.3
Q ss_pred CCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEee---cCcceeeeeeeEEE
Q 007633 193 PDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVET---EGSYTVQQNYTNMD 269 (595)
Q Consensus 193 ~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~---DG~~~~p~~~d~l~ 269 (595)
.+.+++||+.. .|+|++++|+++|+||+|.... .. +||.|.+.+.+. ||.+. ++...
T Consensus 23 ~~~~~~NG~~p-------------GP~I~v~~Gd~v~v~v~N~l~~-~~--siH~HG~~~~~~~~~DGvp~----vtq~~ 82 (339)
T 2zwn_A 23 YKVFGFNGQVP-------------GPLIHVQEGDDVIVNVTNNTSL-PH--TIHWHGVHQKGTWRSDGVPG----VTQQP 82 (339)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEEESSS-CB--CCEEETCCCTTCGGGSCCBT----TTBCC
T ss_pred EEEEEECCccC-------------CCeEEEECCCEEEEEEEECCCC-Cc--cEEeCCCCcCCCcccCCCCc----cccCc
Confidence 35789999863 3999999999999999999864 34 555555666664 99753 34567
Q ss_pred EeccceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 007633 270 IHVGQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNV 349 (595)
Q Consensus 270 i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l 349 (595)
|.|||||++.++++ .+| .||++++.....+.....+.+.-++ .... + .+++... +.+..+. .. .|..
T Consensus 83 I~PG~~~~y~f~~~-~~G-t~wyH~H~~~~~q~~~~Gl~G~liV--~p~~-~--~~~~~~~---d~e~~l~-l~--d~~~ 149 (339)
T 2zwn_A 83 IEAGDSYTYKFKAD-RIG-TLWYHCHVNVNEHVGVRGMWGPLIV--DPKQ-P--LPIEKRV---TKDVIMM-MS--TWES 149 (339)
T ss_dssp BCTTCEEEEEEECC-SCE-EEEEECCSSHHHHTTTSCCEEEEEE--ECSS-C--CTTGGGC---SEEEEEE-EE--EECG
T ss_pred cCCCCeEEEEEECC-CCE-EEEEEecCCchhhhhcCCceEeEEe--cCCC-c--ccccccC---CceEEEE-ee--heec
Confidence 99999999999998 577 9999987643111100112222222 2111 1 1111110 1111000 00 0111
Q ss_pred ccCCCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCc
Q 007633 350 SAGAARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPK 429 (595)
Q Consensus 350 ~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~ 429 (595)
... ..+...+ . .......|.|||+.+..
T Consensus 150 ~~~-~~~~~~g----------------~----~~~~~~~~~ING~~~~~------------------------------- 177 (339)
T 2zwn_A 150 AVA-DKYGEGG----------------T----PMNVADYFSVNAKSFPL------------------------------- 177 (339)
T ss_dssp GGT-TCTTCCC----------------S----TTSCCCEEEETTBCTTS-------------------------------
T ss_pred ccc-cccCCCC----------------C----CccccceEEEccccCCC-------------------------------
Confidence 000 0000000 0 00112358889876521
Q ss_pred cceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC
Q 007633 430 VDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN 509 (595)
Q Consensus 430 ~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN 509 (595)
...+.++.|++++|.|.|.+...||||||||+|+|++.+.+. +.+|.++||+.|+||+++.|+|++||
T Consensus 178 --~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~~ 245 (339)
T 2zwn_A 178 --TQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEADN 245 (339)
T ss_dssp --SCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCS
T ss_pred --cccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeCC
Confidence 123567889999999999988899999999999999995432 22367899999999999999999999
Q ss_pred cceeEEeeccccc------eeccceEEEEEecC
Q 007633 510 AGIWNLRAENLDT------WYLGQEVYVNVINP 536 (595)
Q Consensus 510 PG~W~~HCHil~H------~~~GM~~~~~V~~~ 536 (595)
||.|+||||+++| ...||++.+++...
T Consensus 246 pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 246 PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred CeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 9999999999999 78999999988643
No 42
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.94 E-value=2.7e-26 Score=236.09 Aligned_cols=249 Identities=15% Similarity=0.118 Sum_probs=166.5
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE-EeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL-VETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|+|++++|+++++|+.|.... .+.+|.||....- .+.||.+. +....|.|
T Consensus 23 ~~~~~ng~~p-------------GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~P 84 (318)
T 3g5w_A 23 HTFAFNGQVP-------------APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEP 84 (318)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccC-------------CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCC
Confidence 5789999874 4999999999999999998764 7788999876553 36799753 23457899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAG 352 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~ 352 (595)
||+++..++++ .+| .||.+++.....+... ....+.|.+.... +.+++.. ++.+..+- .. .|.....
T Consensus 85 G~~~~y~f~~~-~~G-t~wYH~H~~~~~~~~~--~Gl~G~lIV~~~~---~~~~~~~---~d~e~~l~-l~--dw~~~~~ 151 (318)
T 3g5w_A 85 GDTFTYKFKAE-PAG-TMWYHCHVNVNEHVTM--RGMWGPLIVEPKN---PLPIEKT---VTKDYILM-LS--DWVSSWA 151 (318)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCSSHHHHHHH--SCCEEEEEEECSS---CCHHHHT---CCEEEEEE-EE--EECGGGT
T ss_pred CCEEEEEEEcC-CCE-EEEEEccCChhhhhcc--CCCEEEEEEcCCC---ccccccc---ccceeEEE-EE--eeccccc
Confidence 99999999997 578 9999988642110000 1122333333211 1011100 01111100 00 1111000
Q ss_pred CCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccce
Q 007633 353 AARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDT 432 (595)
Q Consensus 353 ~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 432 (595)
. .....+ . ..+....|+|||+.|.. .
T Consensus 152 ~-~~~~~~-----------------~---~~~~~d~~~ING~~~~~---------------------------------~ 177 (318)
T 3g5w_A 152 N-KPGEGG-----------------I---PGDVFDYYTINAKSFPE---------------------------------T 177 (318)
T ss_dssp T-CTTCCC-----------------C---TTCCCCEEEETTBCBTS---------------------------------S
T ss_pred c-ccccCC-----------------C---CCCcCcEEEEcCcCCCC---------------------------------C
Confidence 0 000000 0 00012358899987621 1
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|++++|.|.|.+...||||||||.|+|++.+.+. +.+|.++||+.|.||+++.|+|++||||.
T Consensus 178 ~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~ 247 (318)
T 3g5w_A 178 QPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGL 247 (318)
T ss_dssp CCEEECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSE
T ss_pred ccEEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCee
Confidence 12468899999999999988899999999999999985432 22467899999999999999999999999
Q ss_pred eEEeecccccee------ccceEEEEEecCC
Q 007633 513 WNLRAENLDTWY------LGQEVYVNVINPE 537 (595)
Q Consensus 513 W~~HCHil~H~~------~GM~~~~~V~~~~ 537 (595)
|+||||+++|++ .|||..++|...+
T Consensus 248 w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 248 WMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999998 5888888886543
No 43
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.93 E-value=1.3e-25 Score=226.65 Aligned_cols=218 Identities=13% Similarity=0.097 Sum_probs=156.6
Q ss_pred ceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCC-----------
Q 007633 217 YQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQN----------- 285 (595)
Q Consensus 217 ~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~----------- 285 (595)
.|+|++++|+++++++.|... ....+|.||..+.. ..||.. +..-.|.||+++...++++++
T Consensus 35 GP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~ 107 (276)
T 3kw8_A 35 GPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 107 (276)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCCC
Confidence 499999999999999999865 47788999887654 679976 234568999999999999753
Q ss_pred -CCcceEEEEeecccCC-CCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCC
Q 007633 286 -ASSDYYIVASPRFVNS-SEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFK 363 (595)
Q Consensus 286 -~g~~y~i~a~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~ 363 (595)
+| .||.+++...... .........+.|....... .
T Consensus 108 ~~g-t~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~-----~------------------------------------- 144 (276)
T 3kw8_A 108 SAG-YWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-----V------------------------------------- 144 (276)
T ss_dssp SCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-----C-------------------------------------
T ss_pred CCE-EEEEecCccccccchhhhhCccEEEEEEecCCC-----c-------------------------------------
Confidence 35 7778876532110 0000011222222221100 0
Q ss_pred cCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEE
Q 007633 364 YGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFM 443 (595)
Q Consensus 364 ~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~v 443 (595)
..++++.+..+ .|+|||+.|.+ ...+.++.|+.|
T Consensus 145 ----~~drE~~l~l~---------~~~iNG~~~~~---------------------------------~p~i~v~~G~~v 178 (276)
T 3kw8_A 145 ----LPDATHTIVFN---------DMTINNRKPHT---------------------------------GPDFEATVGDRV 178 (276)
T ss_dssp ----CCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEETTCEE
T ss_pred ----ccccceEEEec---------ccccceecccC---------------------------------CCCEEEecCCEE
Confidence 00244444321 27899987631 123578899999
Q ss_pred EEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec---CcceeEEeeccc
Q 007633 444 EIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD---NAGIWNLRAENL 520 (595)
Q Consensus 444 e~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad---NPG~W~~HCHil 520 (595)
+|+|.|.+...|||||||+.|++++ .|.++.. ...+.++||+.|+|+++..++|+++ |||.|+||||++
T Consensus 179 ri~l~N~~~~~Hp~HlHG~~f~v~~--~G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~ 250 (276)
T 3kw8_A 179 EIVMITHGEYYHTFHMHGHRWADNR--TGILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQ 250 (276)
T ss_dssp EEEEEEESSCCEEEEETTCCEESSS--SSSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred EEEEecCCCcceeEEEccceeEEec--cCccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCc
Confidence 9999999888999999999999875 3433321 1124689999999999999999997 899999999999
Q ss_pred cceeccceEEEEEecCCC
Q 007633 521 DTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 521 ~H~~~GM~~~~~V~~~~~ 538 (595)
+|++.|||..++|.+++.
T Consensus 251 ~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 251 SHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp HHHHTTCEEEEEEECTTS
T ss_pred hHhhCCCeEEEEEeCCCC
Confidence 999999999999998764
No 44
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.93 E-value=1.8e-25 Score=227.97 Aligned_cols=218 Identities=11% Similarity=0.064 Sum_probs=150.3
Q ss_pred ceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCC------------
Q 007633 217 YQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQ------------ 284 (595)
Q Consensus 217 ~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~------------ 284 (595)
.|+|++++|++++++|.|.... ...+|.||..+. -+.||.++. .-.|.|||++...++++.
T Consensus 57 GP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 5999999999999999998764 677888887655 367997542 224789999998888763
Q ss_pred CCCcceEEEEeecccCCCC-CCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCC
Q 007633 285 NASSDYYIVASPRFVNSSE-WNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFK 363 (595)
Q Consensus 285 ~~g~~y~i~a~~~~~~~~~-~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~ 363 (595)
.+| .||.+.+........ .......+.|......
T Consensus 130 ~~g-t~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~-------------------------------------------- 164 (299)
T 3t9w_A 130 TAG-YWHYHDHAMGTEHGTEGVLKGLYGALVVRRQG-------------------------------------------- 164 (299)
T ss_dssp CCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEECTT--------------------------------------------
T ss_pred Cce-eEEEecCCcccccchhhhcccccceEEEeccc--------------------------------------------
Confidence 245 677776543211100 0000112222221100
Q ss_pred cCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEE
Q 007633 364 YGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFM 443 (595)
Q Consensus 364 ~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~v 443 (595)
....++++.+.+. .|.+|+..+.. ...+.++.|+.|
T Consensus 165 --~~~~d~e~~l~~~---------~~~~Ng~~~~~---------------------------------~p~l~v~~Ge~V 200 (299)
T 3t9w_A 165 --DLLPKRQFTVVFN---------DMMINNRAHHD---------------------------------APTFEANLGERV 200 (299)
T ss_dssp --CCCCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCEEEEETTCEE
T ss_pred --ccCccccceeeee---------eeeecCccccc---------------------------------cccceecCCCEE
Confidence 0012355555431 37788876521 123567899999
Q ss_pred EEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEE---EEEEEecCcceeEEeeccc
Q 007633 444 EIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWT---AILVYLDNAGIWNLRAENL 520 (595)
Q Consensus 444 e~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~---~irf~adNPG~W~~HCHil 520 (595)
+|+|.|.+...||||||||.|+|+..+... .....+.++||+.|.|+... +++|++||||.|+||||++
T Consensus 201 r~~liN~~~~~HpfHlHGh~F~v~~~g~~~--------~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~ 272 (299)
T 3t9w_A 201 EWIAIGHGSNFHTFHLHGHRWLDNRTGMRT--------SEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQ 272 (299)
T ss_dssp EEEEEEESSCCCEEEETTCCEESSSSSSCC--------STTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred EEEEEeccccceeeeEecceEEEEeccccc--------CCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCH
Confidence 999999999999999999999988775432 22234568999999998654 4556678999999999999
Q ss_pred cceeccceEEEEEecCCC
Q 007633 521 DTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 521 ~H~~~GM~~~~~V~~~~~ 538 (595)
+|++.|||..|+|.+++.
T Consensus 273 ~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 273 NHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp HHHHTTCEEEEEEECTTS
T ss_pred HHHhcCCeEEEEEECCCC
Confidence 999999999999987753
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.92 E-value=1.6e-24 Score=222.59 Aligned_cols=220 Identities=12% Similarity=0.077 Sum_probs=151.6
Q ss_pred CceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCC-----------
Q 007633 216 PYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQ----------- 284 (595)
Q Consensus 216 ~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~----------- 284 (595)
+.|+|++++|++++++|.|.... ...+|.||..+.- +.||.... .-.|.|||++...+++.+
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~-~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYEI-SSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCCC-CccEeecCCcCCc-cCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccC
Confidence 35999999999999999998764 6778888876542 56887542 224889999998887753
Q ss_pred -CCCcceEEEEeecccCCCCC-CCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCC
Q 007633 285 -NASSDYYIVASPRFVNSSEW-NKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSF 362 (595)
Q Consensus 285 -~~g~~y~i~a~~~~~~~~~~-~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~ 362 (595)
.+| .||.+++......... ......+.|......
T Consensus 113 ~~~g-t~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~------------------------------------------- 148 (313)
T 3tas_A 113 GSAG-YWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG------------------------------------------- 148 (313)
T ss_dssp CSCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEECTT-------------------------------------------
T ss_pred CCce-EEEEeecCcccccchhhhhccccCceEeeccc-------------------------------------------
Confidence 234 6676665432111000 000112222221100
Q ss_pred CcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcE
Q 007633 363 KYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGF 442 (595)
Q Consensus 363 ~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ 442 (595)
....++++.+.++ .|++|+..+.. ...+.++.|+.
T Consensus 149 ---~~~~d~e~~l~~~---------d~t~Ng~~~~~---------------------------------~~~l~v~~Ge~ 183 (313)
T 3tas_A 149 ---DVLPDRTHTIVFN---------DMTINNRPAHT---------------------------------GPDFEATVGDR 183 (313)
T ss_dssp ---CBCCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEETTCE
T ss_pred ---cccccccceeecc---------chhcccCCccc---------------------------------ccccccccCCE
Confidence 0012345555431 27888765421 11246788999
Q ss_pred EEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe---cCcceeEEeecc
Q 007633 443 MEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL---DNAGIWNLRAEN 519 (595)
Q Consensus 443 ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a---dNPG~W~~HCHi 519 (595)
|+|+|.|.+...||||||||.|+|+..+... .....+.++||+.|.|++...+++.+ +|||.|+||||+
T Consensus 184 vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi 255 (313)
T 3tas_A 184 VEFVMITHGEYYHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHV 255 (313)
T ss_dssp EEEEEEEESSCCEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECS
T ss_pred EEEEEecccccceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCC
Confidence 9999999999999999999999998765321 12234778999999999888777654 699999999999
Q ss_pred ccceeccceEEEEEecCCCC
Q 007633 520 LDTWYLGQEVYVNVINPEID 539 (595)
Q Consensus 520 l~H~~~GM~~~~~V~~~~~~ 539 (595)
++|+++|||..|+|..++..
T Consensus 256 ~~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 256 QSHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp HHHHHTTCEEEEEEECTTCC
T ss_pred hHHHHCCCeEEEEEECCCCC
Confidence 99999999999999988754
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.86 E-value=7.1e-23 Score=209.75 Aligned_cols=228 Identities=11% Similarity=0.098 Sum_probs=132.6
Q ss_pred eeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCccee----eeeeeEEEEeccceEEEEEEeCCCCC------
Q 007633 218 QLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV----QQNYTNMDIHVGQSFSFLVTTDQNAS------ 287 (595)
Q Consensus 218 ~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~l~i~pGqR~dvlv~~~~~~g------ 287 (595)
|+|++++|+++++||.|... ..+.+|.||..+.. +.||.+.. +...+...|.||||++..+++++.+|
T Consensus 60 P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~ 137 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDP 137 (306)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSC
T ss_pred CEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCC
Confidence 99999999999999999765 47778888777432 67987652 12233567999999999999976532
Q ss_pred --cceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccCCCCCCCCCCCCcC
Q 007633 288 --SDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAGAARPNPQGSFKYG 365 (595)
Q Consensus 288 --~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~ 365 (595)
+.||.+++.....+. ...+.+ ++|.+...... ..+.+.. ++.+..+- ... ++. ..
T Consensus 138 ~~GT~wYHsH~~~~~q~-~~GL~G-~liV~~~~~~~-~~~~~~~---~d~e~~l~-~~d--~d~---------~~----- 194 (306)
T 1sdd_A 138 PCLTHIYYSYVNLVEDF-NSGLIG-PLLICKKGTLT-EDGTQKM---FEKQHVLM-FAV--FDE---------SK----- 194 (306)
T ss_dssp SEEEEEEECCSSSHHHH-HTTCCE-EEEEECTTCBC-TTSSBSS---SCCCCCCB-CCE--EET---------TS-----
T ss_pred CceEEEEeccCCchhhh-ccCceE-EEEEccCCCCC-ccCCcCc---ccceEEEE-EEe--ccc---------cc-----
Confidence 399999985321110 011333 34444321100 0011110 01110000 000 000 00
Q ss_pred ccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEEEE
Q 007633 366 QITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFMEI 445 (595)
Q Consensus 366 ~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~ 445 (595)
+. .......|.|||+.+.. . ..+.++.|++++|
T Consensus 195 ------------~~--~~~~~~~~~ING~~~~~--~-------------------------------p~l~v~~G~~vrl 227 (306)
T 1sdd_A 195 ------------SW--NQTSSLMYTVNGYVNGT--M-------------------------------PDITVCAHDHISW 227 (306)
T ss_dssp ------------SS--SCCCCEEECSSSCCSSC--C-------------------------------CCCCCCCC-----
T ss_pred ------------cc--ccCCCcceeeCCEecCC--C-------------------------------cceEEcCCCEEEE
Confidence 00 00112357788876521 0 1235778999999
Q ss_pred EEEcCCCc--cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeeccccce
Q 007633 446 IFQNNDTT--VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLDTW 523 (595)
Q Consensus 446 vi~N~~~~--~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~H~ 523 (595)
.|.|.+.. .|+||+|||.|++ .| .++||+.|.||+.+.|+|.+++||.|+||||+++|+
T Consensus 228 rliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~ 288 (306)
T 1sdd_A 228 HLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHF 288 (306)
T ss_dssp -BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCCSTTTG
T ss_pred EEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHH
Confidence 99999764 6999999999986 22 358999999999999999999999999999999999
Q ss_pred eccceEEEEEecC
Q 007633 524 YLGQEVYVNVINP 536 (595)
Q Consensus 524 ~~GM~~~~~V~~~ 536 (595)
+.|||..++|.+.
T Consensus 289 ~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 289 QAGMQAYIDIKNC 301 (306)
T ss_dssp GGTCBCCC-----
T ss_pred hcCCeEEEEEecC
Confidence 9999999998743
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.84 E-value=8e-21 Score=214.03 Aligned_cols=247 Identities=11% Similarity=0.162 Sum_probs=146.6
Q ss_pred ceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCccee---e-eeeeEEEEeccceEEEEEEeCCCCC----c
Q 007633 217 YQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTV---Q-QNYTNMDIHVGQSFSFLVTTDQNAS----S 288 (595)
Q Consensus 217 ~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~---p-~~~d~l~i~pGqR~dvlv~~~~~~g----~ 288 (595)
.|+|++++|+++++||.|.... ...+|.||.... .+.||.+.. | ..+....|.|||+++..+++++..| +
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 4999999999999999999864 667777776654 578997642 1 2234567999999999999987532 4
Q ss_pred ----ceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccc-cccccccCCCCCCCCCCCC
Q 007633 289 ----DYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARS-IRWNVSAGAARPNPQGSFK 363 (595)
Q Consensus 289 ----~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~-~~~~l~~~~~~p~p~~~~~ 363 (595)
.||.+++.....+. ...+.+ ++|.............|... .+....+..... -.|.+.. +..
T Consensus 146 ~~c~T~wYHsH~~~~~q~-~~GL~G-~lIV~~~~~~~~~~~~~~~~--~e~~l~l~~~d~~~~w~~~~-----~~~---- 212 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDI-HSGLIG-PLLICRKGTLDKETNMPVDM--REFVLLFMVFDEKKSWYYDK-----KPT---- 212 (647)
T ss_dssp CSEEEEEEECCSSHHHHH-TTTCEE-EEEEECTTSSCTTSCCCSSC--CEEEEEEEEEEGGGSSCCC-------------
T ss_pred CCceEEEEccCCCCcccc-cccCcc-CEEEeeCCCcccccCCCCcc--eeEEEEEEeecCcccccccc-----Ccc----
Confidence 79999987421110 011333 33333321111111111110 011001100000 0111100 000
Q ss_pred cCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCCcEE
Q 007633 364 YGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYKGFM 443 (595)
Q Consensus 364 ~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g~~v 443 (595)
..+.... .. .......+.|||+.+. . +.+.++.|+++
T Consensus 213 -------~~~~~~~-~~-~~~~~~~~~iNG~~~~---~-------------------------------p~l~v~~G~~v 249 (647)
T 1sdd_B 213 -------RSWRRAS-SE-VKNSHEFHAINGMIYN---L-------------------------------PGLRMYEQEWV 249 (647)
T ss_dssp --------------------CCCEEEEETTBSSC---C-------------------------------CCCEEETTCEE
T ss_pred -------cccccCC-cc-hhhcCceeccCCEecC---C-------------------------------CCeEEcCCCEE
Confidence 0000000 00 0011245788887651 0 12467889999
Q ss_pred EEEEEcCCC--ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeecccc
Q 007633 444 EIIFQNNDT--TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAENLD 521 (595)
Q Consensus 444 e~vi~N~~~--~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCHil~ 521 (595)
+|.|.|.+. ..|+||+|||.|+|++.+ +.++||+.|.||+.+.|+|++++||.|+||||+.+
T Consensus 250 rlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~ 313 (647)
T 1sdd_B 250 RLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGE 313 (647)
T ss_dssp EEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECCCHH
T ss_pred EEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccCccc
Confidence 999999875 379999999999998542 45799999999999999999999999999999999
Q ss_pred ceeccceEEEEEecCC
Q 007633 522 TWYLGQEVYVNVINPE 537 (595)
Q Consensus 522 H~~~GM~~~~~V~~~~ 537 (595)
|+++|||..|.|.+++
T Consensus 314 h~~~Gm~~~~~V~~~~ 329 (647)
T 1sdd_B 314 IQRAGMQTPFLIVDRE 329 (647)
T ss_dssp HHTTTCEEEEEEECTT
T ss_pred ccccccccceeeeccc
Confidence 9999999999997543
No 48
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.82 E-value=1e-19 Score=188.07 Aligned_cols=248 Identities=18% Similarity=0.112 Sum_probs=161.5
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|+|++++|+++++|++|.... ..+.+|+||.. +.||... ...|.|
T Consensus 59 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~P 115 (327)
T 1kbv_A 59 RYWTFDGDVP-------------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAP 115 (327)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCT
T ss_pred EEEEECCccC-------------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecC
Confidence 5789999864 3899999999999999999763 47788888863 5788642 124899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAG 352 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~ 352 (595)
||++++.+++++ +| .||.+++...........+.+ +++.+. .. ++|. ++.+..+-. -+|.....
T Consensus 116 G~~~~y~f~~~~-~G-t~wyH~h~~~~~~~~~~Gl~G-~~iV~~-~~-----~~p~----~d~e~~l~~---~d~~~~~~ 179 (327)
T 1kbv_A 116 GRTSTFSFKALQ-PG-LYIYHCAVAPVGMHIANGMYG-LILVEP-KE-----GLPK----VDKEFYIVQ---GDFYTKGK 179 (327)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCSSHHHHHHTTCEE-EEEEEC-TT-----CCCC----CSEEEEEEE---EEECBSSC
T ss_pred CCEEEEEEECCC-Ce-EEEEEeCCCChhhhhhcceEE-EEEEec-CC-----CCCC----CceEEEEEe---eeeeccCc
Confidence 999999999985 67 999998753110000001222 333332 11 2222 121111100 01111100
Q ss_pred CCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccce
Q 007633 353 AARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDT 432 (595)
Q Consensus 353 ~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 432 (595)
. ... +....+ +.... ... ...+.+||+.+... ..
T Consensus 180 ~---~~~-----g~~~~~----~~~~~--~~~-~~~~~iNG~~~~~~-------------------------------~~ 213 (327)
T 1kbv_A 180 K---GAQ-----GLQPFD----MDKAV--AEQ-PEYVVFNGHVGALT-------------------------------GD 213 (327)
T ss_dssp T---TCC-----EEECBC----HHHHH--HTC-CSEEEETTSTTTTS-------------------------------GG
T ss_pred c---ccc-----cccccC----hhHhc--cCC-CceEEEcCcccCCC-------------------------------Cc
Confidence 0 000 000000 00000 011 13577888765210 01
Q ss_pred eEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 433 SLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
..+.++.|++++|.|.|.+. ..|+||+|||.|+|++.+.+.. +|.++|++.|.||+...|.|++++||
T Consensus 214 ~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG 282 (327)
T 1kbv_A 214 NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPG 282 (327)
T ss_dssp GCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCE
T ss_pred eeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCe
Confidence 24578899999999999864 6799999999999999975521 25689999999999999999999999
Q ss_pred eeEEeeccccce-eccceEEEEEecCC
Q 007633 512 IWNLRAENLDTW-YLGQEVYVNVINPE 537 (595)
Q Consensus 512 ~W~~HCHil~H~-~~GM~~~~~V~~~~ 537 (595)
.|.+|||+.+|. ..||++.++|....
T Consensus 283 ~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 283 NYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEEEeccccccccCCcEEEEEECCCC
Confidence 999999999995 78999999997554
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.81 E-value=3.6e-19 Score=185.23 Aligned_cols=260 Identities=15% Similarity=0.170 Sum_probs=156.3
Q ss_pred CCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEe
Q 007633 193 PDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIH 271 (595)
Q Consensus 193 ~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~ 271 (595)
.+.+++||+.. .|+|++++|+++|+|+.|.... ..|.++++++.. +.||..+ + .|.
T Consensus 59 ~~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~ 115 (340)
T 2bw4_A 59 IHAMTFNGSVP-------------GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVN 115 (340)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBC
T ss_pred EEEEEECCCCC-------------CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeC
Confidence 35789999853 3899999999999999998742 456677777542 2344332 1 399
Q ss_pred ccceEEEEEEeCCCCCcceEEEEeeccc--CCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 007633 272 VGQSFSFLVTTDQNASSDYYIVASPRFV--NSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNV 349 (595)
Q Consensus 272 pGqR~dvlv~~~~~~g~~y~i~a~~~~~--~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l 349 (595)
|||++++.+++++ +| .||.+++.... .+. ...+.+ +++.+.....+...+.|. .++.+..+. .-.|.+
T Consensus 116 PG~~~~y~~~~~~-~G-t~wyH~h~~~~~~~~~-~~Gl~G-~~iV~~~~~~~~~~~~p~---~~d~e~~l~---l~D~~~ 185 (340)
T 2bw4_A 116 PGEETTLRFKATK-PG-VFVYHCAPEGMVPWHV-TSGMNG-AIMVLPRDGLKDEKGQPL---TYDKIYYVG---EQDFYV 185 (340)
T ss_dssp TTEEEEEEEECCS-CE-EEEEECCCTTCHHHHH-HTTCEE-EEEEECTBCEECTTSCEE---CCSEEEEEE---EEEECC
T ss_pred CCCEEEEEEECCC-Ce-EEEEEcCCCCchhhHH-hCcCEE-EEEEccCcCcccccCCCc---CcceeEEEe---eeeeee
Confidence 9999999999985 78 99999986421 000 011323 233332111000000111 112111110 001111
Q ss_pred ccCCCCCCCCCCCC-cCcc--ceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCC
Q 007633 350 SAGAARPNPQGSFK-YGQI--TVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSR 426 (595)
Q Consensus 350 ~~~~~~p~p~~~~~-~~~~--~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~ 426 (595)
. ..+.+.+. +... ..... +.... .. ....|.|||+.+...
T Consensus 186 ~-----~~~~g~~~~~~~~~~~~~~~--~~~~~--~~-~~~~~~iNG~~~~~~--------------------------- 228 (340)
T 2bw4_A 186 P-----KDEAGNYKKYETPGEAYEDA--VKAMR--TL-TPTHIVFNGAVGALT--------------------------- 228 (340)
T ss_dssp C-----BCTTSCBCCCCSHHHHHHHH--HHHHH--TT-CCSEEEETTSTTTTS---------------------------
T ss_pred c-----cccCCcccccccccccccch--hhHhh--cC-CCCEEEECCccCCcc---------------------------
Confidence 0 00011000 0000 00000 00000 00 113578888765210
Q ss_pred CCccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCC--cccEEEeCCCcEEEEE
Q 007633 427 APKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGV--ARSTTQVFPGAWTAIL 504 (595)
Q Consensus 427 ~~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~--~rDTv~v~p~g~~~ir 504 (595)
....+.++.|+.++|++.|.+...|++|+|||.|+|+. .|.+. +++ +.||+.|.||+.+.|.
T Consensus 229 ----~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~ 292 (340)
T 2bw4_A 229 ----GDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWA--TGKFR----------NPPDLDQETWLIPGGTAGAAF 292 (340)
T ss_dssp ----GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET--TCCTT----------SCCEEEESCCCBCTTEEEEEE
T ss_pred ----CCCceEcCCCCEEEEEECCCCCccceEEecCcceEEeC--CCccc----------CCccccceEEEeCCCceEEEE
Confidence 01235788899999988888777899999999999985 33221 122 4699999999999999
Q ss_pred EEecCcceeEEeeccc-cceeccceEEEEEecCCC
Q 007633 505 VYLDNAGIWNLRAENL-DTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 505 f~adNPG~W~~HCHil-~H~~~GM~~~~~V~~~~~ 538 (595)
|.+++||.|+||||++ +|++.|||..++|..++.
T Consensus 293 v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 293 YTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 9999999999999999 699999999999986543
No 50
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.81 E-value=2.1e-21 Score=220.48 Aligned_cols=245 Identities=11% Similarity=0.134 Sum_probs=150.3
Q ss_pred CceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCC---------CC
Q 007633 216 PYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQ---------NA 286 (595)
Q Consensus 216 ~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~---------~~ 286 (595)
..|.|+++.|++++++|.|... ..+.+|.||..+....-||..- ....|.||++++..+++++ .+
T Consensus 197 pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~ 270 (770)
T 2r7e_B 197 LGPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDC 270 (770)
T ss_dssp CCCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSE
T ss_pred CCCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCC
Confidence 4599999999999999999976 4677788877665444358642 2246899999999998875 45
Q ss_pred CcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccc----cccccCC--CCCCCCC
Q 007633 287 SSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIR----WNVSAGA--ARPNPQG 360 (595)
Q Consensus 287 g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~----~~l~~~~--~~p~p~~ 360 (595)
| .||.+.+.....+. ...+.+ ++|.............+. .+.++.+-. ..+. |.+.... ..+.|..
T Consensus 271 G-t~wYHsh~~~~~q~-~~GL~G-~liV~~~~~~~~~~~~~~----~d~E~vl~~-~~~de~~swy~~~~~~~~~~~p~~ 342 (770)
T 2r7e_B 271 K-AWAYSSDVDLEKDV-HSGLIG-PLLVCHTNTLNPAHGRQV----TVQEFALFF-TIFDETKSWYFTENMERNCRAPCN 342 (770)
T ss_dssp E-EEEECCCSSSSHHH-HTSCCE-EEEEECSTTSCSSSCCCC----SSEEEECCC-CEECCSSSSCTTGGGSSCSCCSSC
T ss_pred e-eEEeeccCCcHHHH-hCCcee-eEEECCCcccccccCCCc----cceEEEEEE-eecCccccchhccchhhcccCccc
Confidence 6 89998876532110 011222 233222111000000000 011110000 0000 0000000 0000100
Q ss_pred CCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccceeEEecCCC
Q 007633 361 SFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDTSLINGTYK 440 (595)
Q Consensus 361 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~g 440 (595)
... ..+. .......|+|||..+. ....+.++.|
T Consensus 343 ------~~~-------~d~~-~~~~~~~~~ING~~~~---------------------------------~~~~l~v~~G 375 (770)
T 2r7e_B 343 ------IQM-------EDPT-FKENYRFHAINGYIMD---------------------------------TLPGLVMAQD 375 (770)
T ss_dssp ------CCS-------SSSS-STTTSCEECTTSCTTT---------------------------------TCCCCCCCSS
T ss_pred ------ccc-------CCcc-ccccCCccccCCccCC---------------------------------CCCCeEEeCC
Confidence 000 0000 0111224666665431 1223467899
Q ss_pred cEEEEEEEcCCCc--cceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeEEeec
Q 007633 441 GFMEIIFQNNDTT--VQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWNLRAE 518 (595)
Q Consensus 441 ~~ve~vi~N~~~~--~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~~HCH 518 (595)
+.++|.|.|.+.. .||||||||.|+|++.+ +.++||+.|+|++++.|+|++||||.|+||||
T Consensus 376 e~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH 439 (770)
T 2r7e_B 376 QRIRWYLLSMGSNENIHSIHFSGHVFTVRKKE----------------EYKMALYNLYPGVFETVEMLPSKAGIWRVECL 439 (770)
T ss_dssp SCEEEECCCCCSSSCCCEEEBSSCCEECCSSS----------------CCEESEEECCTTCCCEEEECCSSCBCCCBCCC
T ss_pred CEEEEEEEeCCCCcceEEEEEcCCEEEEEecC----------------CceeeEEEECCCeEEEEEEEeCCCCceEEEec
Confidence 9999999998753 79999999999998763 12799999999999999999999999999999
Q ss_pred cccceeccceEEEEEecCC
Q 007633 519 NLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 519 il~H~~~GM~~~~~V~~~~ 537 (595)
+++|++.|||..|.|...+
T Consensus 440 ~~~H~~~GM~~~~~V~s~~ 458 (770)
T 2r7e_B 440 IGEHLHAGMSTLFLVYSNK 458 (770)
T ss_dssp SHHHHTTBCCCCCCBCCSS
T ss_pred ccccccccccccccccccc
Confidence 9999999999999986433
No 51
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.76 E-value=1.2e-17 Score=173.27 Aligned_cols=262 Identities=14% Similarity=0.104 Sum_probs=149.6
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|.|++++|+++++|+.|.+.. ..|.++++++. ..||.. +. + .|.|
T Consensus 53 ~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~--~--~i~P 109 (333)
T 1mzy_A 53 QAMTFDGSIP-------------GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GL--T--LINP 109 (333)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GG--C--CBCT
T ss_pred EEEEECCccC-------------CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--ce--e--EeCC
Confidence 5789999864 3999999999999999999642 23445555432 123221 11 1 3899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecc--c-CCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRF--V-NSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNV 349 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~--~-~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l 349 (595)
|+++++.+++++ +| .||.+++... . .+. ...+.+.-|++ .... ...+.+ .+..++.+..+- .. .|..
T Consensus 110 G~~~~y~f~~~~-~G-t~~yH~h~~~~~~~~~~-~~Gl~G~~iV~--~~~~-~~~~~~-~p~~~d~e~~l~-l~--D~~~ 179 (333)
T 1mzy_A 110 GEKVVLRFKATR-AG-AFVYHCAPGGPMIPWHV-VSGMAGCIMVL--PRDG-LKDHEG-KPVRYDTVYYIG-ES--DHYI 179 (333)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCSTTHHHHHH-HTTCEEEEEEE--CTTC-CBCTTS-CBCCCSEEEEEE-EE--EECC
T ss_pred CCEEEEEEECCC-CE-EEEEeecCCcccchhhh-hCCCEEEEEEc--cCcC-cccccc-CCCccchheeee-ee--eecc
Confidence 999999999974 78 9999998642 0 000 01133333333 2111 000010 011112111110 00 1111
Q ss_pred ccCCCCCCCCCCCC-cCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCC
Q 007633 350 SAGAARPNPQGSFK-YGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAP 428 (595)
Q Consensus 350 ~~~~~~p~p~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~ 428 (595)
.. ...+.+. +.... . .+.-..... .......|.|||+.+..+
T Consensus 180 ~~-----~~~g~~~~~~~~~-~-~~~~~~~~~-~~~~~~~~~ING~~~~~~----------------------------- 222 (333)
T 1mzy_A 180 PK-----DEDGTYMRFSDPS-E-GYEDMVAVM-DTLIPSHIVFNGAVGALT----------------------------- 222 (333)
T ss_dssp CB-----CTTSCBCCCSSHH-H-HHHHHHHHH-TTTCCSEEEETTSTTTTS-----------------------------
T ss_pred Cc-----ccccccccccccc-c-cccchhHHh-hccCCcEEEECCcccccC-----------------------------
Confidence 00 0000000 00000 0 000000000 000123578888764210
Q ss_pred ccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCC-cccEEEeCCCcEEEEEEEe
Q 007633 429 KVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGV-ARSTTQVFPGAWTAILVYL 507 (595)
Q Consensus 429 ~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~-~rDTv~v~p~g~~~irf~a 507 (595)
+...+.++.|+.++|+..|.+...|++++|+|.|.|++ .|.+.+ .|. ++||+.|.||+.+.+.|.+
T Consensus 223 --~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~--dG~~~~---------~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 223 --GEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE--TGKFHN---------APERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp --GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET--TCCTTS---------CCEEEESBCCBCTTEEEEEEEEC
T ss_pred --CCcceEecCCCEEEEEECCCCCccccEEECCCCeEEEe--CCcccC---------CCccCcceEEECCCceEEEEEEc
Confidence 01235678899999888776555556667888898886 343221 122 4899999999999999999
Q ss_pred cCcceeEEeeccccce-eccceEEEEEecCCC
Q 007633 508 DNAGIWNLRAENLDTW-YLGQEVYVNVINPEI 538 (595)
Q Consensus 508 dNPG~W~~HCHil~H~-~~GM~~~~~V~~~~~ 538 (595)
++||.|+||||+++|+ +.|||..++|..+..
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 9999999999999997 999999999986543
No 52
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.72 E-value=6.1e-17 Score=174.43 Aligned_cols=249 Identities=14% Similarity=0.110 Sum_probs=161.6
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|.|++++|+++++||.|.... ..+.+|+||+. ..||... +..|.|
T Consensus 49 ~~~~~ng~~p-------------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~p 105 (442)
T 2zoo_A 49 VFWSFGETVP-------------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAP 105 (442)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCT
T ss_pred EEEEECCcCC-------------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECC
Confidence 5789999873 3899999999999999998643 57889999975 3688642 235899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeecccCCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccccC
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFVNSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVSAG 352 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~~~ 352 (595)
|+++++.++++ .+| .||++++....... ......+.+.+.... ++|. ++.+..+- .. .|.....
T Consensus 106 g~~~~y~f~~~-~~G-t~~yH~H~~~~~~~--~~~Gl~G~~iv~~~~-----~~~~----~d~e~~l~-l~--d~~~~~~ 169 (442)
T 2zoo_A 106 GHTSTFNFKAL-NPG-LYIYHCATAPVGMH--IANGMYGLILVEPKE-----GLAP----VDREYYLV-QG--DFYTKGE 169 (442)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCCSSHHHH--HHTTCEEEEEEECTT-----CCCC----CSEEEEEE-EE--EECBSSC
T ss_pred CCEEEEEEEcC-CCe-EEEEecCCCChHHH--HhCccEEEEEEeCCC-----CCCC----CCceEEEE-ee--eeeccCc
Confidence 99999999987 478 99999964210000 001223444443221 1221 12111110 00 1111100
Q ss_pred CCCCCCCCCCCcCccceeEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCCCccce
Q 007633 353 AARPNPQGSFKYGQITVTDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRAPKVDT 432 (595)
Q Consensus 353 ~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 432 (595)
. +... ...+.+... .......+.|||+.+... ..
T Consensus 170 ~-----------~~~~-~~~~~~~~~---~~~~~~~~liNG~~~~~~-------------------------------~~ 203 (442)
T 2zoo_A 170 F-----------GEAG-LQPFDMAKA---IDEDADYVVFNGSVGSTT-------------------------------DE 203 (442)
T ss_dssp T-----------TCCE-EECBCHHHH---HTTCCSEEEETTSTTTTS-------------------------------GG
T ss_pred c-----------cccc-cccCChhHh---ccCCCCEEEECCCcCCCC-------------------------------CC
Confidence 0 0000 000000000 000113567888754210 01
Q ss_pred eEEecCCCcEEEEEEEcCCC-ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcc
Q 007633 433 SLINGTYKGFMEIIFQNNDT-TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~-~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG 511 (595)
..+.++.|+++.|.|.|.+. ..|+||+||+.|.|++.+.+.. .|.+.|++.|.||+...+.|.+++||
T Consensus 204 ~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G 272 (442)
T 2zoo_A 204 NSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPG 272 (442)
T ss_dssp GCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCE
T ss_pred CceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCC
Confidence 23567889999999999764 6799999999999999865421 25678999999999999999999999
Q ss_pred eeEEeeccccc-eeccceEEEEEecCCC
Q 007633 512 IWNLRAENLDT-WYLGQEVYVNVINPEI 538 (595)
Q Consensus 512 ~W~~HCHil~H-~~~GM~~~~~V~~~~~ 538 (595)
.|.+|||...| .+.||+..++|...+.
T Consensus 273 ~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 273 TFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred eEEEEecccccccccCceEEEEecCCCC
Confidence 99999999999 5899999999976553
No 53
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.71 E-value=2.1e-16 Score=163.98 Aligned_cols=259 Identities=15% Similarity=0.198 Sum_probs=153.3
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC-ceeeEEEeCCceeEEeecCcceeeeeeeEEEEec
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS-TSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHV 272 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~p 272 (595)
..+++||+.. .|+|++++|+++++|+.|.... ..|.++++|+.. +.||..+ + .|.|
T Consensus 54 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~-----~--~i~p 110 (336)
T 1oe1_A 54 QAMTFNGSMP-------------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKL-----T--NVNP 110 (336)
T ss_dssp EEEEETTBSS-------------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCT
T ss_pred EEEEECCccC-------------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcce-----E--EeCC
Confidence 5789999853 3899999999999999998753 477789988753 2233332 1 3899
Q ss_pred cceEEEEEEeCCCCCcceEEEEeeccc--CCCCCCCcceEEEEEecCCCCCCCCCCCCCCCCCCcccccccccccccccc
Q 007633 273 GQSFSFLVTTDQNASSDYYIVASPRFV--NSSEWNKVTGVAILHYSNSLGPASGPLPDPPNAYDTYFSMNQARSIRWNVS 350 (595)
Q Consensus 273 GqR~dvlv~~~~~~g~~y~i~a~~~~~--~~~~~~~~~~~ail~y~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~l~ 350 (595)
||++++.+++++ +| .||.+++.... .+. ...+.+.-|++-.... ..+.+. +..++.+..+- .. .|.+.
T Consensus 111 G~~~~y~f~~~~-~G-t~~yH~h~~~~~~~~~-~~Gl~G~liV~~~~~~---~~~~~~-~~~~D~e~~l~-~~--D~~~~ 180 (336)
T 1oe1_A 111 GEQATLRFKADR-SG-TFVYHCAPEGMVPWHV-VSGMSGTLMVLPRDGL---KDPQGK-PLHYDRAYTIG-EF--DLYIP 180 (336)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCTTCHHHHH-HTTCEEEEEEECTTCC---BCTTSC-BCCCSEEEEEE-EE--EECCC
T ss_pred CCEEEEEEECCC-Ce-EEEEecCCCCchhHHH-hCCCeEEEEEecCcCC---cccccC-cccCCceeEee-ee--eeeec
Confidence 999999999985 78 99999986421 000 0113333333322110 001111 11112111100 00 01000
Q ss_pred cCCCCCCCCCCC-CcCcc-ce-eEEEEEecccccccCCeEEEEecCeecCCCCCcHhhhhhcCCCCccccCCCCCCCCCC
Q 007633 351 AGAARPNPQGSF-KYGQI-TV-TDVYVILNRPAELIEGKWRTTLNGISYLPPSTPLMLAQQFNIPGAYKLDFPYKLMSRA 427 (595)
Q Consensus 351 ~~~~~p~p~~~~-~~~~~-~~-~~~~~l~~~~~~~~~g~~~~~iNg~sf~~~~~P~~~~~~~~~~~~~~~~~~~~p~~~~ 427 (595)
. ...+.+ .+... .. ... +.... ... ...+.|||+.+...
T Consensus 181 ~-----~~~g~~~~~~~~~~~~~~~--~~~~~--~~~-~~~~liNG~~~~~~---------------------------- 222 (336)
T 1oe1_A 181 K-----GPDGKYKDYATLAESYGDT--VQVMR--TLT-PSHIVFNGKVGALT---------------------------- 222 (336)
T ss_dssp B-----CTTSSBCCCSSTGGGHHHH--HHHHH--TTC-CSEEEETTSTTTTS----------------------------
T ss_pred c-----ccCCceeecccccccccch--hhHhh--cCC-CCEEEECCeeccCC----------------------------
Confidence 0 000000 00000 00 000 00000 001 12466676654110
Q ss_pred CccceeEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCC--cccEEEeCCCcEEEEEE
Q 007633 428 PKVDTSLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGV--ARSTTQVFPGAWTAILV 505 (595)
Q Consensus 428 ~~~~~~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~--~rDTv~v~p~g~~~irf 505 (595)
+...+.++.|+.+.|+..+.+...+++++|||.|.|+. +|.+. +|. +.||+.|++|+...+.+
T Consensus 223 ---~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~~----------~p~~~~~dtv~i~pGer~dvlv 287 (336)
T 1oe1_A 223 ---GANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKFA----------NPPQRDLETWFIRGGSAGAALY 287 (336)
T ss_dssp ---GGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEE
T ss_pred ---CCcceEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcCc----------CCccccceEEEECCCCcEEEEE
Confidence 12346788899999877766666677778999999985 44321 122 46999999999999999
Q ss_pred EecCcceeEEeeccccce-eccceEEEEEecCCC
Q 007633 506 YLDNAGIWNLRAENLDTW-YLGQEVYVNVINPEI 538 (595)
Q Consensus 506 ~adNPG~W~~HCHil~H~-~~GM~~~~~V~~~~~ 538 (595)
.+++||.|+||||.+.|. +.||+..++|...+.
T Consensus 288 ~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 288 TFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp ECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EcCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 999999999999999886 999999999986543
No 54
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.63 E-value=6.3e-17 Score=138.48 Aligned_cols=90 Identities=19% Similarity=0.209 Sum_probs=72.8
Q ss_pred CCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCC--CCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 57 GQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKN--SWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 57 g~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~--~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
-+|++|+|++++||+|+ +.|..+.++++||||..+... ..+||.+.+++.|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 46789999999999975 679998999999999865321 0123332345789999999999998668999999999
Q ss_pred chhhhcCceeeEEEec
Q 007633 135 DFQRAAGGYGGIIINN 150 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~~ 150 (595)
.|..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 677889999999974
No 55
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.60 E-value=4e-14 Score=152.35 Aligned_cols=238 Identities=13% Similarity=0.054 Sum_probs=153.2
Q ss_pred eEEEEEEEEEEEecCCCe-----------eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeee-CCccCCCCC
Q 007633 31 YVFYDWTISYVTASPLGD-----------KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTW-NGVQHRKNS 97 (595)
Q Consensus 31 ~~~~~l~~~~~~~~~~G~-----------~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~~~ 97 (595)
.+++.|.++......+|. .-..++|||+. .|+|+|++| ++++|+.|... ..+.+|+ ||.... --
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~-vi 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLH-VI 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEE-EE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEE-EE
Confidence 456778887766554442 34679999994 799999999 99999999975 5678999 886543 24
Q ss_pred CCCCCC----C--CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCce-----------eeEE-EeccCCCCCCCC
Q 007633 98 WQDGVL----G--TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGY-----------GGII-INNRDVIPLPFA 159 (595)
Q Consensus 98 ~~DGv~----~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~-----------G~li-V~~~~~~~~~~~ 159 (595)
..||.+ . .+..|.|||+++..++++ +.|+||++++........+. .+++ ........ +.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~-~~- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLP-LV- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCc-Cc-
Confidence 579963 2 557899999999999995 68999999986543221111 1221 11111000 00
Q ss_pred CCCCceeEeeeccccccHH-HHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCC
Q 007633 160 VPDGDITIFISDWYTKSHK-KLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIS 238 (595)
Q Consensus 160 ~~d~e~~l~l~d~~~~~~~-~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~ 238 (595)
..+++..+..+..-... .....+.-. ..++|||+.+.. ..+.+.++.|++++|+|+|.
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~----------~~~~~~~~~G~~~~~~l~N~--- 364 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDV----------NRIDVTAQQGTWERWTVRAD--- 364 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCT----------TCCCEEEETTCEEEEEEEEE---
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCC----------CCCcEEcCCCCEEEEEEECC---
Confidence 00000001110000000 000000000 036799998721 23568999999999999997
Q ss_pred ceeeEEEeCCceeEEeecCcce---eeeeeeEEEEeccceEEEEEEeCCCCC---cceEEEEeecc
Q 007633 239 TSLNFRIQNHNLLLVETEGSYT---VQQNYTNMDIHVGQSFSFLVTTDQNAS---SDYYIVASPRF 298 (595)
Q Consensus 239 ~~~~~~i~gh~~~via~DG~~~---~p~~~d~l~i~pGqR~dvlv~~~~~~g---~~y~i~a~~~~ 298 (595)
..|.||||||.|+|++.||... +|...|++.| |+++.|.+++++ +| ..|.++++...
T Consensus 365 ~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dn-pg~~~g~w~~HCHil~ 427 (451)
T 2uxt_A 365 EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQ-PSWAHFPFYFNSQTLE 427 (451)
T ss_dssp EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCS-CCBTTBCEEEEESSHH
T ss_pred CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCC-CCCCCCceEEeCCchh
Confidence 4899999999999999999865 3678999999 999999999985 44 14999998754
No 56
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.55 E-value=1.3e-13 Score=147.95 Aligned_cols=231 Identities=12% Similarity=0.067 Sum_probs=160.5
Q ss_pred eEEEEEEEEEEEecCC------------CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCC
Q 007633 31 YVFYDWTISYVTASPL------------GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNS 97 (595)
Q Consensus 31 ~~~~~l~~~~~~~~~~------------G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~ 97 (595)
.+++.|.++......+ |..-..+++||+. .|.|+|++| ++++|+.|... ..+.+|++|..... -
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 4567777665443321 3334678999996 699999999 99999999975 46789999976532 4
Q ss_pred CCCCCCC------CCCccCCCCeEEEEEEECCceeeeEEccCcchh--hh-cCc--------------eeeEEEeccCC-
Q 007633 98 WQDGVLG------TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQ--RA-AGG--------------YGGIIINNRDV- 153 (595)
Q Consensus 98 ~~DGv~~------tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q--~~-~Gl--------------~G~liV~~~~~- 153 (595)
..||.+. ....|.|||+++..++++ ++|.||++|+.... .. .|| ....+++-...
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~-~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRLR-KEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECC-SSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEcC-CCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 5788752 346699999999999995 69999999974211 10 122 11222222111
Q ss_pred CCCCCCC---CC---------CceeEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEE
Q 007633 154 IPLPFAV---PD---------GDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLIN 221 (595)
Q Consensus 154 ~~~~~~~---~d---------~e~~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~ 221 (595)
.+.+.+. +. +++.+-+. . ....+.|||+.+.. ..+.+.
T Consensus 302 ~~~~~p~~l~~~~~l~~~~~~r~~~l~~~-----------------~---~g~~~~iNg~~~~~----------~~~~~~ 351 (439)
T 2xu9_A 302 KPLPLPKALSPFPTLPAPVVTRRLVLTED-----------------M---MAARFFINGQVFDH----------RRVDLK 351 (439)
T ss_dssp CCCCCCSCCCCCCCCCCCSEEEEEEEEEE-----------------G---GGTEEEETTBCCCT----------TCCCEE
T ss_pred ccccCcccCCCcccCCCCCcceEEEEEee-----------------c---cCceEeECCEECCC----------CCCcee
Confidence 1111100 00 01111100 0 01368999998721 224589
Q ss_pred EecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce-eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 222 VEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT-VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 222 v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
++.|++++|+|.|.+. ..|.||+|||.|+|++.+|... +|...|++.+.||+++.+.++++ .+| .|.++++...
T Consensus 352 ~~~g~~~~~~~~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG-~w~~HCHil~ 426 (439)
T 2xu9_A 352 GQAQTVEVWEVENQGD-MDHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKG-RTVFHCHIVE 426 (439)
T ss_dssp ECTTCEEEEEEEECSS-SCEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCE-EEEEEESSHH
T ss_pred cCCCCEEEEEEEcCCC-CCCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCC-CEEEECCcch
Confidence 9999999999999876 4899999999999999999765 48889999999999999999977 678 8999998753
No 57
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.47 E-value=1.6e-12 Score=142.47 Aligned_cols=240 Identities=14% Similarity=0.125 Sum_probs=154.1
Q ss_pred EEEEEcCCCC---------CCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeE
Q 007633 51 QVIGINGQFP---------GPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNW 115 (595)
Q Consensus 51 ~~~~~Ng~~P---------gP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 115 (595)
..++|||+.. -|+|+|++|+++++|+.|... ..+.+|++|.... --..||.+. ....|.|||++
T Consensus 192 d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~-vi~~DG~~~~p~~~~~l~l~pgqR~ 270 (521)
T 1v10_A 192 DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMT-VIEVDGVSHQPLTVDSLTIFAGQRY 270 (521)
T ss_dssp SEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEE-EEEETTEEEEEEEESBEEECTTCEE
T ss_pred CEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEE-EEecCCccccceeeeeEEEcccceE
Confidence 5789999843 189999999999999999976 5678999987553 245789752 34569999999
Q ss_pred EEEEEECCceeeeEEccCcch---hhhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccH--H---------HHH
Q 007633 116 TYQFQVKDQIGSFFYFPSLDF---QRAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSH--K---------KLR 181 (595)
Q Consensus 116 ~Y~f~~~~~~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~--~---------~l~ 181 (595)
+..+++++.+|.||.+++... ....|+..+++.........|..... +. ..+.+...... . ...
T Consensus 271 dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~~-~~~~~~~l~p~~~~~~p~~~~~~~~~ 348 (521)
T 1v10_A 271 SVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-SG-TALNEANLIPLINPGAPGNPVPGGAD 348 (521)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-CS-CBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-cc-cccchhhcccCCcccCCCcccCCcce
Confidence 999999655799999998541 12234434555443221111110000 00 00000000000 0 000
Q ss_pred H--HHhCCCCCCCCCeEEEcCCCCCCCCCC-----------CCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC
Q 007633 182 K--DVENGVDLGVPDGILINGLGPYRYDAA-----------IVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH 248 (595)
Q Consensus 182 ~--~~~~g~~~~~~d~~liNG~~~~~~~~~-----------~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh 248 (595)
. .+..+.. .....+.|||+.+..-... ........+.++++.|++++++++| ...|.||+|||
T Consensus 349 ~~~~l~~~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh 424 (521)
T 1v10_A 349 INLNLRIGRN-ATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGH 424 (521)
T ss_dssp EEEECCEECC-SSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSC
T ss_pred EEEEEEEecC-CceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccc
Confidence 0 0000000 1112578999986321000 0000012467899999999999999 35899999999
Q ss_pred ceeEEeecCcc----eeeeeeeEEEE-eccceEEEEEEeCCCCCcceEEEEeeccc
Q 007633 249 NLLLVETEGSY----TVQQNYTNMDI-HVGQSFSFLVTTDQNASSDYYIVASPRFV 299 (595)
Q Consensus 249 ~~~via~DG~~----~~p~~~d~l~i-~pGqR~dvlv~~~~~~g~~y~i~a~~~~~ 299 (595)
.|+|++.+|.. .+|...|++.+ .+|+++.|.++++ ++| .|.++++....
T Consensus 425 ~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG-~W~~HCHi~~H 478 (521)
T 1v10_A 425 NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPG-PWFLHCHIDWH 478 (521)
T ss_dssp CEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCE-EEEEEESCHHH
T ss_pred eEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCe-eEEEeeChHHH
Confidence 99999998865 35888999999 7999999999988 578 89999987543
No 58
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.47 E-value=2.3e-12 Score=140.51 Aligned_cols=261 Identities=13% Similarity=0.086 Sum_probs=163.9
Q ss_pred EEEEEEEEEEecCCCe-----eEEEEEEcCCCC--------CCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCC
Q 007633 33 FYDWTISYVTASPLGD-----KQQVIGINGQFP--------GPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSW 98 (595)
Q Consensus 33 ~~~l~~~~~~~~~~G~-----~~~~~~~Ng~~P--------gP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~ 98 (595)
++.|.++......++. .-..++|||+.. .|+|+|++|+++++|+.|... ..+.+|++|....- -.
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 4566666554444332 235689999853 289999999999999999975 56789998875532 46
Q ss_pred CCCCC---C--CCCccCCCCeEEEEEEECCceeeeEEccCcch--h-----hhcCceeeEEEeccCCCCCCCCCCCCcee
Q 007633 99 QDGVL---G--TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDF--Q-----RAAGGYGGIIINNRDVIPLPFAVPDGDIT 166 (595)
Q Consensus 99 ~DGv~---~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--q-----~~~Gl~G~liV~~~~~~~~~~~~~d~e~~ 166 (595)
.||.+ . ....|.|||+++..+++++.+|.||.+++... + ...|+..+++.........|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 79975 2 34568999999999999655799999997531 1 2234434444443221111110000000
Q ss_pred EeeeccccccH--HHHH---------HHHhCCCCCCCCCeEEEcCCCCCCCCCC-----CCC------CCCCceeEEEec
Q 007633 167 IFISDWYTKSH--KKLR---------KDVENGVDLGVPDGILINGLGPYRYDAA-----IVP------DGIPYQLINVEP 224 (595)
Q Consensus 167 l~l~d~~~~~~--~~l~---------~~~~~g~~~~~~d~~liNG~~~~~~~~~-----~~~------~~~~~~~l~v~~ 224 (595)
..+.++..... .... ..+..... .....+.|||+.+..-... ..+ .......++++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00011000000 0000 00000000 0012688999986321000 000 001246789999
Q ss_pred CcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce----eeeeeeEEEE-eccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 225 GKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT----VQQNYTNMDI-HVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 225 G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~l~i-~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
|++++++++|......|.||+|||.|+|++.+|... +|...|++.| .+|+++.|.++++ ++| .|.++++...
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG-~W~~HCHil~ 456 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPG-PWFFHCHIEF 456 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCE-EEEEEESSHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCe-eeeEecCchh
Confidence 999999999655456899999999999999998652 5888999999 7999999999988 578 8999998754
No 59
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.45 E-value=1.8e-13 Score=124.86 Aligned_cols=98 Identities=14% Similarity=0.189 Sum_probs=74.1
Q ss_pred CeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC------CC--CCCccCCCC--eEE
Q 007633 47 GDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV------LG--TNCPIPAGW--NWT 116 (595)
Q Consensus 47 G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv------~~--tq~~I~PG~--~~~ 116 (595)
|.....+.++|. |+|+|+|++||+|+++++|..+ ...|.+.+.+.++.+.+.. ++ ...+|.||+ +.+
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 444445566766 6799999999999999999733 4467777765544443211 11 012789999 999
Q ss_pred EEEEECCceeeeEEccCcchhhhcCceeeEEEe
Q 007633 117 YQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 117 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
|.|++ ++|+||||||...|..+||+|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99997 79999999999999999999999984
No 60
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.40 E-value=1.8e-12 Score=112.09 Aligned_cols=104 Identities=21% Similarity=0.117 Sum_probs=78.9
Q ss_pred EEEEEEEEEEe-----cCCCeeEEE-EEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC
Q 007633 33 FYDWTISYVTA-----SPLGDKQQV-IGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN 106 (595)
Q Consensus 33 ~~~l~~~~~~~-----~~~G~~~~~-~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq 106 (595)
.|++.+.+... ..+|+.... ..+|++|++|.|++++||+|+++++|.... +||+.... .|+ +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~---~ 70 (112)
T 1iby_A 3 NFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV---Q 70 (112)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---E
T ss_pred ceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---e
Confidence 45555555433 345677666 489999999999999999999999999765 45543321 122 3
Q ss_pred CccCCCCeEEEEEEECCceeeeEEccCcchhhhcCceeeEEEec
Q 007633 107 CPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 107 ~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
..+.||++++|.|++ +++|+||||||...+... |.|.|+|.+
T Consensus 71 ~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 71 EVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred eEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 679999999999998 689999999997654433 999999974
No 61
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.38 E-value=1.7e-11 Score=132.28 Aligned_cols=237 Identities=16% Similarity=0.094 Sum_probs=158.9
Q ss_pred EEEEEEEEEEEecCCCe-------------eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCC
Q 007633 32 VFYDWTISYVTASPLGD-------------KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNS 97 (595)
Q Consensus 32 ~~~~l~~~~~~~~~~G~-------------~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~ 97 (595)
..| |.++......+|. .-..+++||+. .|+|.|++|+ ++|+.|... ..+.+|++|.... --
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~-vI 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFI-LV 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEE-EE
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceE-EE
Confidence 445 7777666555553 23578999995 6899999999 999999874 6788999998743 35
Q ss_pred CCCCCC----C--CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcCce--------eeEEEeccC-CCCCC-----
Q 007633 98 WQDGVL----G--TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAGGY--------GGIIINNRD-VIPLP----- 157 (595)
Q Consensus 98 ~~DGv~----~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~--------G~liV~~~~-~~~~~----- 157 (595)
..||.. . ....|.|||+++..++++ +.|+|-.-++.... .|+. -.+.+.... ..+.|
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 678742 2 446799999999999995 67887776653211 1111 111222111 11111
Q ss_pred ---CCCCCCceeEeeeccccc-------cHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcE
Q 007633 158 ---FAVPDGDITIFISDWYTK-------SHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKT 227 (595)
Q Consensus 158 ---~~~~d~e~~l~l~d~~~~-------~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~ 227 (595)
.+..+.+..+.++....+ ........+ ...++|||+.+. .+.+.++++.|++
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~iNG~~~~----------~~~~~~~~~~G~~ 394 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIAL--------ASMFLINRKSYD----------LKRIDLSSKLGVV 394 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHHH--------HTTEEETTBCCC----------TTCCCEEEETTCC
T ss_pred CCCCCCCCcEEEEEEeccchhcccccccccccccccc--------cceeEECCEeCC----------CCCceEEeCCCCE
Confidence 111222333333321100 000000000 124899999872 1346799999999
Q ss_pred EEEEEEEeCCCceeeEEEeCCceeEEee--cCccee---eeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeec
Q 007633 228 YRLRVHNVGISTSLNFRIQNHNLLLVET--EGSYTV---QQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPR 297 (595)
Q Consensus 228 ~rlRliNag~~~~~~~~i~gh~~~via~--DG~~~~---p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~ 297 (595)
++|+|.|.+. ..|.||||||.|+|++. ||.... +...|++.+.|||++.|.++++ .+| .|.++++..
T Consensus 395 v~w~l~N~~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG-~w~~HCHil 466 (481)
T 3zx1_A 395 EDWIVINKSH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKG-LRMYHCHIL 466 (481)
T ss_dssp EEEEEEECSS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCE-EEEEEESSH
T ss_pred EEEEEEcCCC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCe-eEEEEcCCh
Confidence 9999999665 58999999999999999 997764 4678999999999999999997 678 899999764
No 62
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.34 E-value=5.2e-11 Score=129.15 Aligned_cols=244 Identities=12% Similarity=0.110 Sum_probs=152.7
Q ss_pred EEEEEEcCCC---------CCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCe
Q 007633 50 QQVIGINGQF---------PGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWN 114 (595)
Q Consensus 50 ~~~~~~Ng~~---------PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~ 114 (595)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|.... --..||.+. ....|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~-via~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMT-IIETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEE-EEEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEE-EEEeCCcccCCEEeeeEEEcCceE
Confidence 4679999973 3479999999999999999764 5678899887643 246789752 3356999999
Q ss_pred EEEEEEECCceeeeEEccCcc--h-hhhcCceeeEEEeccCCCCCCCCCCCC-ceeEeeeccccccHHH-----------
Q 007633 115 WTYQFQVKDQIGSFFYFPSLD--F-QRAAGGYGGIIINNRDVIPLPFAVPDG-DITIFISDWYTKSHKK----------- 179 (595)
Q Consensus 115 ~~Y~f~~~~~~Gt~wYH~H~~--~-q~~~Gl~G~liV~~~~~~~~~~~~~d~-e~~l~l~d~~~~~~~~----------- 179 (595)
++..+++++.+|.||.++... . ....|..-+++.........|...... ... .+.+........
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCCC
Confidence 999999965569999998642 1 122233334444432221111100000 000 001110000000
Q ss_pred HHHHHhCCCCCCCCCeEEEcCCCCCCCCCC-----------CCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCC
Q 007633 180 LRKDVENGVDLGVPDGILINGLGPYRYDAA-----------IVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNH 248 (595)
Q Consensus 180 l~~~~~~g~~~~~~d~~liNG~~~~~~~~~-----------~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh 248 (595)
....+..... .....+.|||+.+..-... ..........+.++.|++++|.|.|......|.||+|||
T Consensus 326 ~d~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 326 ADCNLNLSLG-FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp SSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CcEEEEEEEE-ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 0000000000 0012588999886321000 000001235789999999999998433445899999999
Q ss_pred ceeEEeecCcce----eeeeeeEEEEec-cceEEEEEEeCCCCCcceEEEEeecc
Q 007633 249 NLLLVETEGSYT----VQQNYTNMDIHV-GQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 249 ~~~via~DG~~~----~p~~~d~l~i~p-GqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
.|+|++.+|... .|...|++.+.+ |+.+.+.++++ ++| .|.++++...
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG-~W~~HCHi~~ 457 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPG-PWFLHCHIDW 457 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCE-EEEEEESCHH
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCe-eEEEEecchh
Confidence 999999988644 588899999997 99999999988 678 8889998754
No 63
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.32 E-value=3.5e-12 Score=139.10 Aligned_cols=95 Identities=16% Similarity=0.169 Sum_probs=74.8
Q ss_pred CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCce
Q 007633 46 LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQI 125 (595)
Q Consensus 46 ~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~ 125 (595)
+++...+|++|++||+|+|++++||+|+++++|..+..-. +||+.... .|+ ++.|.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 4678899999999999999999999999999998653111 24443321 122 2679999999999999 699
Q ss_pred eeeEEccCc---chhhhcCceeeEEEeccC
Q 007633 126 GSFFYFPSL---DFQRAAGGYGGIIINNRD 152 (595)
Q Consensus 126 Gt~wYH~H~---~~q~~~Gl~G~liV~~~~ 152 (595)
|+||||||. ..|. ||+|.|+|++++
T Consensus 567 GtY~yhC~e~Cg~~H~--gM~G~IiV~p~~ 594 (595)
T 1fwx_A 567 GVYWYYCQWFCHALHM--EMRGRMLVEPKE 594 (595)
T ss_dssp EEEEEECCSCCSTTCT--TCEEEEEEECC-
T ss_pred EEEEEECCCCCCCCcc--CCEEEEEEEcCC
Confidence 999999993 2443 999999999853
No 64
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.28 E-value=2.2e-10 Score=125.55 Aligned_cols=244 Identities=11% Similarity=0.109 Sum_probs=149.5
Q ss_pred EEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeEEEEEEECC
Q 007633 50 QQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNWTYQFQVKD 123 (595)
Q Consensus 50 ~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~~~~ 123 (595)
...++|||+. .|+|+|++|+++++|+.|... ....+|.+|..+. --..||.+. ....|.|||+++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~-vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMT-VVEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEE-EEEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeE-EEeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 3578999995 699999999999999999975 5677888887543 245788752 3466999999999999963
Q ss_pred c-eeeeEEccCcchhhhc------CceeeEEEeccCCCCCCCCCCCCceeEeeeccccccH--HHH----HH--HHh--C
Q 007633 124 Q-IGSFFYFPSLDFQRAA------GGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSH--KKL----RK--DVE--N 186 (595)
Q Consensus 124 ~-~Gt~wYH~H~~~q~~~------Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~--~~l----~~--~~~--~ 186 (595)
+ .|.||..........+ ...+..+++=....+.|-+....++.-.+.|...... ..+ .. .+. .
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 3 5789998765422110 1122223321111111100000000000000000000 000 00 000 0
Q ss_pred CCCCCCCCeEEEcCCCCCCCCCC------------CCCC--CCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeE
Q 007633 187 GVDLGVPDGILINGLGPYRYDAA------------IVPD--GIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLL 252 (595)
Q Consensus 187 g~~~~~~d~~liNG~~~~~~~~~------------~~~~--~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~v 252 (595)
.........++|||+.+..-... ..+. ......+.++.|++++|.|.|.+. ..|.||+|||.|+|
T Consensus 325 ~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~-~~HP~HLHGh~F~V 403 (534)
T 1zpu_A 325 DNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDT-GTHPFHLHGHAFQT 403 (534)
T ss_dssp EECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSS-SCEEEEETTCCEEE
T ss_pred eccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCC-CCCCeEecCCceEE
Confidence 00001123578999876321000 0000 001356899999999999999875 48999999999999
Q ss_pred EeecCc-----------c---------eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 253 VETEGS-----------Y---------TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 253 ia~DG~-----------~---------~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
++.++. + ..|...|++.+.+|+.+.|.++++ ++| .|.++++...
T Consensus 404 l~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG-~W~~HCHi~~ 467 (534)
T 1zpu_A 404 IQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPG-VWFFHCHIEW 467 (534)
T ss_dssp EEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCE-EEEEEECCHH
T ss_pred EeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCe-eEEEEeCchh
Confidence 998753 1 246788999999999999999988 678 8999998754
No 65
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.26 E-value=1.2e-10 Score=125.50 Aligned_cols=250 Identities=14% Similarity=0.074 Sum_probs=156.3
Q ss_pred EEEEEEEEEEEecCCCe--------------eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeee-CCccCCC
Q 007633 32 VFYDWTISYVTASPLGD--------------KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTW-NGVQHRK 95 (595)
Q Consensus 32 ~~~~l~~~~~~~~~~G~--------------~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~ 95 (595)
.++.|.++......+|. .-..+++||+. .|.+.+ +|+++++|+.|... ..+.+++ +|....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~- 227 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLY- 227 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEE-
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEE-
Confidence 36677777665544442 23578999995 588876 67899999999865 5677887 675432
Q ss_pred CCCCCCCC----C--CCCccCCCCeEEEEEEECCceeeeEEccCcchhhh------cCceeeEEEecc---CCCCCCC--
Q 007633 96 NSWQDGVL----G--TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRA------AGGYGGIIINNR---DVIPLPF-- 158 (595)
Q Consensus 96 ~~~~DGv~----~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~------~Gl~G~liV~~~---~~~~~~~-- 158 (595)
--..||.+ . ....|.|||+++..++++ +.++|+.-+....... ..-.-.+.|.+. +....|.
T Consensus 228 vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 228 VIASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp EEEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred EEEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 24679853 2 456799999999999995 5777777554221110 000012223321 1111111
Q ss_pred ---C---C----CCCceeEeeec-cccccHHHHHHHH----hCCCC---------CC------------CCCeEEEcCCC
Q 007633 159 ---A---V----PDGDITIFISD-WYTKSHKKLRKDV----ENGVD---------LG------------VPDGILINGLG 202 (595)
Q Consensus 159 ---~---~----~d~e~~l~l~d-~~~~~~~~l~~~~----~~g~~---------~~------------~~d~~liNG~~ 202 (595)
+ . ..+++.+.+.. +.......+.+.. ..+.. .+ ....++|||+.
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~ 386 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQA 386 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBC
T ss_pred ccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCee
Confidence 0 0 11233343321 0000000000000 00000 00 01247999999
Q ss_pred CCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcceee---eeeeEEEEeccceEEEE
Q 007633 203 PYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQ---QNYTNMDIHVGQSFSFL 279 (595)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p---~~~d~l~i~pGqR~dvl 279 (595)
+.. +.+.++++.|+++||+|+|.+....|.||||||.|+|++.||....+ ...|++.|. |+++.|+
T Consensus 387 ~~~----------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~ 455 (488)
T 3od3_A 387 FDM----------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVL 455 (488)
T ss_dssp CCT----------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEE
T ss_pred CCC----------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEE
Confidence 721 23668999999999999999865689999999999999999987653 468999999 9999999
Q ss_pred EEeCCC---CCcceEEEEeec
Q 007633 280 VTTDQN---ASSDYYIVASPR 297 (595)
Q Consensus 280 v~~~~~---~g~~y~i~a~~~ 297 (595)
+++++. +| .|.++++..
T Consensus 456 ~~f~~~~~~~G-~~m~HCH~l 475 (488)
T 3od3_A 456 VKFNHDAPKEH-AYMAHCHLL 475 (488)
T ss_dssp ECBCSCCCGGG-CEEEEESSH
T ss_pred EEeccCCCCCC-CEEEeCCch
Confidence 999753 35 799999764
No 66
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.25 E-value=1.3e-10 Score=128.26 Aligned_cols=228 Identities=11% Similarity=0.069 Sum_probs=139.8
Q ss_pred eEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeEEEEEEEC-CceeeeEEccCcc
Q 007633 63 ILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNWTYQFQVK-DQIGSFFYFPSLD 135 (595)
Q Consensus 63 ~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~~~-~~~Gt~wYH~H~~ 135 (595)
+|+|++|+++++|+.|... ..+.+|++|.... --..||.+. ....|.|||+++..++++ +.+|.||-+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~-vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLL-VVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEE-EEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEE-EEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999975 4577899887543 245799652 446799999999999994 3489999999854
Q ss_pred hhhhcCce--eeEEEeccCCCCCCCCCCCCceeEeeeccccccHHHHHHHHhC----CC--CC----------------C
Q 007633 136 FQRAAGGY--GGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKKLRKDVEN----GV--DL----------------G 191 (595)
Q Consensus 136 ~q~~~Gl~--G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~l~~~~~~----g~--~~----------------~ 191 (595)
.-...... +.|..........|... .... ..|. +........+.. .. .. .
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~----p~~~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQT----PAWD-DFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVIN 357 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCCC----CCTT-CHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEET
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCCC----Cccc-cccccccccccccccCCCCCCCCCCcEEEEEEEeeccCC
Confidence 21011122 22222222110111000 0000 0010 000000000000 00 00 0
Q ss_pred CCCeEEEcCCCCCCCCCC----------------CC------------CC-----CCCceeEEEecCcEEEEEEEEeCC-
Q 007633 192 VPDGILINGLGPYRYDAA----------------IV------------PD-----GIPYQLINVEPGKTYRLRVHNVGI- 237 (595)
Q Consensus 192 ~~d~~liNG~~~~~~~~~----------------~~------------~~-----~~~~~~l~v~~G~~~rlRliNag~- 237 (595)
....+.|||+.+..-... .. +. ......+.++.|++++|.|.|.+.
T Consensus 358 ~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~ 437 (552)
T 1aoz_A 358 GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMM 437 (552)
T ss_dssp TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCS
T ss_pred CeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCccc
Confidence 012467888754211000 00 00 001245889999999999999875
Q ss_pred ----CceeeEEEeCCceeEEee-cCcc----------eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeeccc
Q 007633 238 ----STSLNFRIQNHNLLLVET-EGSY----------TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFV 299 (595)
Q Consensus 238 ----~~~~~~~i~gh~~~via~-DG~~----------~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~ 299 (595)
...|.||+|||.|+|++. +|.+ .+|...|++.+.+|+.+.|.++++ ++| .|.++++....
T Consensus 438 ~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG-~W~~HCHi~~H 512 (552)
T 1aoz_A 438 KENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPG-VWAFHCHIEPH 512 (552)
T ss_dssp STTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCE-EEEEEESSHHH
T ss_pred ccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCe-EEEEEeeehhH
Confidence 347999999999999998 4653 357789999999999999999988 578 89999987543
No 67
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.24 E-value=2.9e-10 Score=123.33 Aligned_cols=244 Identities=11% Similarity=0.079 Sum_probs=150.9
Q ss_pred EEEEEEcCCC--------CCCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeE
Q 007633 50 QQVIGINGQF--------PGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNW 115 (595)
Q Consensus 50 ~~~~~~Ng~~--------PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 115 (595)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|.... --..||.+. ....|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~-via~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLT-IIEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEE-EEEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEE-EEEECCcccCceEeeeEEECCCcEE
Confidence 4679999973 3479999999999999999865 5678999997653 246788752 33569999999
Q ss_pred EEEEEECCceeeeEEccCcc--hh-hhcCceeeEEEeccCCCCCCCCCCCCceeEeeeccccccHHH-----------HH
Q 007633 116 TYQFQVKDQIGSFFYFPSLD--FQ-RAAGGYGGIIINNRDVIPLPFAVPDGDITIFISDWYTKSHKK-----------LR 181 (595)
Q Consensus 116 ~Y~f~~~~~~Gt~wYH~H~~--~q-~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~-----------l~ 181 (595)
+..+++++.+|.||-.+... .+ ...|..-+++.........|......+. ..+.+........ ..
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 99999965569999987632 11 1122222344343221111110000000 0001110000000 00
Q ss_pred HHHhCCCCCCCCCeEEEcCCCCCCCCCC-----------CCCCCCCceeEEEecCcEEEEEEEEeC--CCceeeEEEeCC
Q 007633 182 KDVENGVDLGVPDGILINGLGPYRYDAA-----------IVPDGIPYQLINVEPGKTYRLRVHNVG--ISTSLNFRIQNH 248 (595)
Q Consensus 182 ~~~~~g~~~~~~d~~liNG~~~~~~~~~-----------~~~~~~~~~~l~v~~G~~~rlRliNag--~~~~~~~~i~gh 248 (595)
..+..... .....+.|||+.+..-... ..........+.++.|++++|.|.|.+ ....|.||+|||
T Consensus 324 ~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 324 KAINMAFN-FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp EEEECCEE-ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred EEEEEEEE-ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 00000000 0112578999886321000 000011235789999999999999532 234799999999
Q ss_pred ceeEEeecCcce----eeeeeeEEEEec---cceEEEEEEeCCCCCcceEEEEeecc
Q 007633 249 NLLLVETEGSYT----VQQNYTNMDIHV---GQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 249 ~~~via~DG~~~----~p~~~d~l~i~p---GqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
.|+|++.+|... .|...|++.+.+ |+.+.+.++++ +|| .+.++++...
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG-~W~~HCHi~~ 457 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPG-PWFLHCHIDF 457 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCE-EEEEEESSHH
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCc-eEEEEeCChh
Confidence 999999887543 588899999986 99999999988 678 8889998754
No 68
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.22 E-value=1.7e-10 Score=123.75 Aligned_cols=229 Identities=12% Similarity=0.023 Sum_probs=150.4
Q ss_pred EEEEEEEEEEEecC-------------CCeeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeee--CC---cc
Q 007633 32 VFYDWTISYVTASP-------------LGDKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTW--NG---VQ 92 (595)
Q Consensus 32 ~~~~l~~~~~~~~~-------------~G~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~--HG---~~ 92 (595)
+++.|.++...... .|..-..+++||+. .|+|+|++| ++++|+.|... ..+.+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56677776654433 12233578999995 699999999 99999999975 5678999 77 43
Q ss_pred CCCCCCCCCCC----C--CCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc---C----------ceee--EEEecc
Q 007633 93 HRKNSWQDGVL----G--TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA---G----------GYGG--IIINNR 151 (595)
Q Consensus 93 ~~~~~~~DGv~----~--tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~---G----------l~G~--liV~~~ 151 (595)
.. --..||.+ . ....|.|||+++..++++ .|.||..++....... + .... |.+...
T Consensus 216 ~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MR-LIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EE-EEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EE-EEEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 22 24678874 2 345689999999999995 4789988774211000 0 1111 222222
Q ss_pred CCCCCCC--C-------CCCCceeEeeeccccccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEE-
Q 007633 152 DVIPLPF--A-------VPDGDITIFISDWYTKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLIN- 221 (595)
Q Consensus 152 ~~~~~~~--~-------~~d~e~~l~l~d~~~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~- 221 (595)
...+.|. . ....+..+.+.. + ...+.|||+.+.. ..+.++
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~---------------~-----~~~~~iNg~~~~~----------~~p~~~~ 342 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL---------------S-----GMQWTINGMFWNA----------SNPLFEH 342 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE---------------E-----TTEEEETTBCCCT----------TCTTCCC
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC---------------C-----CceeeECCCcCCC----------CCCceec
Confidence 1110010 0 000111111110 0 1258999998731 124567
Q ss_pred EecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce------------ee---eeeeEEEEeccceEEEEEEeC---
Q 007633 222 VEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT------------VQ---QNYTNMDIHVGQSFSFLVTTD--- 283 (595)
Q Consensus 222 v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~------------~p---~~~d~l~i~pGqR~dvlv~~~--- 283 (595)
++.|++++|+|.|.+....|.||+|||.|+|++.+|... .| ...|++.+.||+++.+.+++.
T Consensus 343 ~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~ 422 (448)
T 3aw5_A 343 VSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKK 422 (448)
T ss_dssp EEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGG
T ss_pred cCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccC
Confidence 899999999999988445899999999999999999764 23 578999999999999997775
Q ss_pred CCCCcceEEEEeec
Q 007633 284 QNASSDYYIVASPR 297 (595)
Q Consensus 284 ~~~g~~y~i~a~~~ 297 (595)
.. . .|.++++..
T Consensus 423 ad-n-pw~~HCHil 434 (448)
T 3aw5_A 423 RG-Q-LFPFHCHNL 434 (448)
T ss_dssp TT-C-EEEEEESSH
T ss_pred CC-C-cEEEEcCCh
Confidence 21 2 377888764
No 69
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.21 E-value=9.9e-10 Score=121.15 Aligned_cols=247 Identities=9% Similarity=0.040 Sum_probs=149.5
Q ss_pred EEEEEEcCCCC--------CCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeE
Q 007633 50 QQVIGINGQFP--------GPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNW 115 (595)
Q Consensus 50 ~~~~~~Ng~~P--------gP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 115 (595)
...++|||+.. -|+|+|++|+++++|+.|... ..+.+|++|..+. --..||.+. ....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~-vi~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMT-VIAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEE-EEEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceE-EEecCCcccCceEeCeEEEccEEEE
Confidence 35789999973 379999999999999999975 4678999987543 245788762 44669999999
Q ss_pred EEEEEECCceeeeEEccCc--chhh--hcCce-eeEEEeccCCCCCCCCC----CC----CceeE-eeeccccccH---H
Q 007633 116 TYQFQVKDQIGSFFYFPSL--DFQR--AAGGY-GGIIINNRDVIPLPFAV----PD----GDITI-FISDWYTKSH---K 178 (595)
Q Consensus 116 ~Y~f~~~~~~Gt~wYH~H~--~~q~--~~Gl~-G~liV~~~~~~~~~~~~----~d----~e~~l-~l~d~~~~~~---~ 178 (595)
+..+++++..|.||..... .... ..... .+++.........|... .+ .+..+ -+........ .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999996557899988765 2110 01111 22332221111111100 00 00000 0000000000 0
Q ss_pred HHHHHH--hCCCCCCCCCeEEEcCCCCCCCCCCC------CCC---CCCceeEEEecCcEEEEEEEEeCC----CceeeE
Q 007633 179 KLRKDV--ENGVDLGVPDGILINGLGPYRYDAAI------VPD---GIPYQLINVEPGKTYRLRVHNVGI----STSLNF 243 (595)
Q Consensus 179 ~l~~~~--~~g~~~~~~d~~liNG~~~~~~~~~~------~~~---~~~~~~l~v~~G~~~rlRliNag~----~~~~~~ 243 (595)
.....+ ...........+.|||+.+......+ .+. ......+.+..++++++.++|... ...|+|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 000000 00000111246899999863210000 000 011245888888888887887754 568999
Q ss_pred EEeCCceeEEeecC---------c-c-----------eeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeeccc
Q 007633 244 RIQNHNLLLVETEG---------S-Y-----------TVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFV 299 (595)
Q Consensus 244 ~i~gh~~~via~DG---------~-~-----------~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~ 299 (595)
|+|||.|+|++.++ . + ..|...|++.+.+|+++.|.++++ ++| .|.++++....
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG-~W~~HCHil~H 508 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPG-AWLFHCHIAWH 508 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCE-EEEEEECCHHH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCe-eEEEEecchhH
Confidence 99999999999986 2 1 146788999999999999999988 578 89999987543
No 70
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.17 E-value=6.4e-11 Score=100.94 Aligned_cols=78 Identities=14% Similarity=0.132 Sum_probs=62.9
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
+..|..+.|++++||+|++ .|..+.++++|+++. +||... .+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 5566678999999999654 699888999999863 256654 456799999999888 479999999986
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
.. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 33 999999984
No 71
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.14 E-value=5.6e-10 Score=123.46 Aligned_cols=233 Identities=10% Similarity=-0.017 Sum_probs=145.8
Q ss_pred EEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCcc------CCCCCCCCCCC----C--C------CCccCC
Q 007633 51 QVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQ------HRKNSWQDGVL----G--T------NCPIPA 111 (595)
Q Consensus 51 ~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~------~~~~~~~DGv~----~--t------q~~I~P 111 (595)
..+++||+. .|.+.|++| ++++|+.|... ..+.+++.|.. ...--..||.+ . . ...|.|
T Consensus 255 d~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~p 332 (612)
T 2g23_A 255 PYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAP 332 (612)
T ss_dssp SEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECT
T ss_pred CEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECC
Confidence 568999994 699999999 99999999875 56778886641 01113578864 2 2 457999
Q ss_pred CCeEEEEEEECCceee-eEEccCcchhh------hc----CceeeEEEeccCC-C--CCCCC------CCCCc-----ee
Q 007633 112 GWNWTYQFQVKDQIGS-FFYFPSLDFQR------AA----GGYGGIIINNRDV-I--PLPFA------VPDGD-----IT 166 (595)
Q Consensus 112 G~~~~Y~f~~~~~~Gt-~wYH~H~~~q~------~~----Gl~G~liV~~~~~-~--~~~~~------~~d~e-----~~ 166 (595)
||+++.-+++++.+|+ ++-........ .+ +..--|.|..+.. . ..|-. ....+ ..
T Consensus 333 geR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r~ 412 (612)
T 2g23_A 333 AERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRL 412 (612)
T ss_dssp TCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEE
T ss_pred cCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccceeE
Confidence 9999999999654674 66655421111 00 1111245554321 1 11111 00001 11
Q ss_pred Eeee------------ccccccHHHHHH-HHh-CC-----CCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcE
Q 007633 167 IFIS------------DWYTKSHKKLRK-DVE-NG-----VDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKT 227 (595)
Q Consensus 167 l~l~------------d~~~~~~~~l~~-~~~-~g-----~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~ 227 (595)
+++. -|.......-.. .+. .+ ...+....+.|||+.+. +.+.++++.|++
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~-----------~~~~~~v~~G~~ 481 (612)
T 2g23_A 413 IVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN-----------DGLGFTIGEGTH 481 (612)
T ss_dssp EEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-----------SCCCEEEETTCE
T ss_pred EeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC-----------CCCceEecCCCE
Confidence 2221 011100000000 000 00 00111235889999872 357899999999
Q ss_pred EEEEEEEeCCCceeeEEEeCCceeEEeecCc------------------------ce---eeeeeeEEEEeccceEEEEE
Q 007633 228 YRLRVHNVGISTSLNFRIQNHNLLLVETEGS------------------------YT---VQQNYTNMDIHVGQSFSFLV 280 (595)
Q Consensus 228 ~rlRliNag~~~~~~~~i~gh~~~via~DG~------------------------~~---~p~~~d~l~i~pGqR~dvlv 280 (595)
++|+|+|.+. ..|.||||||.|+|++.+|. .. ++...|++.+.|||++.|.+
T Consensus 482 v~w~l~N~~~-~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~ 560 (612)
T 2g23_A 482 EQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMG 560 (612)
T ss_dssp EEEEEEECSS-SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEE
T ss_pred EEEEEEeCCC-CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEE
Confidence 9999999985 48999999999999987532 11 12368999999999999999
Q ss_pred EeCCCCCcceEEEEeecc
Q 007633 281 TTDQNASSDYYIVASPRF 298 (595)
Q Consensus 281 ~~~~~~g~~y~i~a~~~~ 298 (595)
+++..+| .|.++++...
T Consensus 561 ~~~~~pG-~w~~HCHil~ 577 (612)
T 2g23_A 561 KFDGAYG-RFMYHCHLLE 577 (612)
T ss_dssp ECCSCCE-EEEEEESSHH
T ss_pred EeCCCCc-cEEEEeCchh
Confidence 9996788 9999998754
No 72
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.12 E-value=1.2e-10 Score=99.30 Aligned_cols=83 Identities=14% Similarity=0.185 Sum_probs=64.2
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC-----CCCCCccCCCCeEEEEEEECCceeeeEEccCcc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV-----LGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv-----~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 135 (595)
-+.|++++||+|++ .|....++.+|.|+.... ..+|. ..+...+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 37999999999755 588777899998886432 12332 0123468999999999987568999999999
Q ss_pred hhhhcCceeeEEEec
Q 007633 136 FQRAAGGYGGIIINN 150 (595)
Q Consensus 136 ~q~~~Gl~G~liV~~ 150 (595)
.|...||.|.|+|.+
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 778889999999963
No 73
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.10 E-value=1e-09 Score=120.22 Aligned_cols=250 Identities=14% Similarity=0.034 Sum_probs=148.7
Q ss_pred EEEEEEEEEEecCCCe-----------eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCc------cCC
Q 007633 33 FYDWTISYVTASPLGD-----------KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGV------QHR 94 (595)
Q Consensus 33 ~~~l~~~~~~~~~~G~-----------~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~------~~~ 94 (595)
++.|.++......+|. .-..+++||+ +.|.|.|+.| ++++|+.|... ....++++|. +..
T Consensus 173 d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~-~~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~ 250 (534)
T 3abg_A 173 DIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQ-PWPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPF 250 (534)
T ss_dssp SCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTE-ESCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCE
T ss_pred eEEEEEeeeeecCCCceeccCCCCccccCceeccCCc-cCceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccE
Confidence 4556666654444332 2357899999 5799999985 99999999975 5568888761 111
Q ss_pred CCCCCCCC----CC--CCCccCCCCeEEEEEEECCcee-eeEEccCcchhhhc-------CceeeEEEeccCCCCCCCCC
Q 007633 95 KNSWQDGV----LG--TNCPIPAGWNWTYQFQVKDQIG-SFFYFPSLDFQRAA-------GGYGGIIINNRDVIPLPFAV 160 (595)
Q Consensus 95 ~~~~~DGv----~~--tq~~I~PG~~~~Y~f~~~~~~G-t~wYH~H~~~q~~~-------Gl~G~liV~~~~~~~~~~~~ 160 (595)
.--..||. |. ....|.|||+++..+++++.+| +||........... ...+.+-.........+.
T Consensus 251 ~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~-- 328 (534)
T 3abg_A 251 KVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD-- 328 (534)
T ss_dssp EEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC--
T ss_pred EEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC--
Confidence 22457885 22 4567999999999999864477 58776532100000 011222222111100000
Q ss_pred CCCceeEeeeccc-cccHHHHHHHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCc
Q 007633 161 PDGDITIFISDWY-TKSHKKLRKDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGIST 239 (595)
Q Consensus 161 ~d~e~~l~l~d~~-~~~~~~l~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~ 239 (595)
....+..+.... ..........+.-+. ....++|||+.+..- .....++++.|++++|.|.|.+...
T Consensus 329 -~~~~P~~L~~~~~p~~~~~~~~~~~~~~---~~~~w~iNG~~f~~~--------~~p~l~~v~~G~~~~w~i~N~~~~~ 396 (534)
T 3abg_A 329 -TSVVPANLRDVPFPSPTTNTPRQFRFGR---TGPTWTINGVAFADV--------QNRLLANVPVGTVERWELINAGNGW 396 (534)
T ss_dssp -CCCCCCCCCCCSCCCCCCCCCEEEECSC---CCSTTCCCCBTTBCT--------TSCCCCEECTTCEEEEEEEECSSSC
T ss_pred -CCCCccccccCCCCCCccccceEEEEec---cCceeEECCcccCCC--------CCcceeeccCCCEEEEEEEcCCCCC
Confidence 000000000000 000000000000000 112468999987210 0112467999999999999988656
Q ss_pred eeeEEEeCCceeEEee-cCc---ceee---eeeeEEEEeccceEEEEEEeCCCCCcceEEEEeeccc
Q 007633 240 SLNFRIQNHNLLLVET-EGS---YTVQ---QNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRFV 299 (595)
Q Consensus 240 ~~~~~i~gh~~~via~-DG~---~~~p---~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~~ 299 (595)
.|.||||||.|+|++. +|. ...+ ...|++.+.||+++.|.+.+.+.+| .|.++++....
T Consensus 397 ~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adnpG-~w~~HCHil~H 462 (534)
T 3abg_A 397 THPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPG-VYMFHCHNLIH 462 (534)
T ss_dssp CCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSCCE-EEEEEESCHHH
T ss_pred CcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCCCc-cEEEecChHHH
Confidence 8999999999999998 663 1112 4589999999999999998444788 99999987543
No 74
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.10 E-value=6.5e-10 Score=121.47 Aligned_cols=218 Identities=12% Similarity=0.029 Sum_probs=139.5
Q ss_pred EEEEEEcCCCCCCeEEeecCCEEEEEEEECCC-CCceeeeCCc-cCCCCCCCCCCC----C--CCCccCCCCeEEEEEEE
Q 007633 50 QQVIGINGQFPGPILNVTTNWNVVVNVKNDLD-EPLLLTWNGV-QHRKNSWQDGVL----G--TNCPIPAGWNWTYQFQV 121 (595)
Q Consensus 50 ~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~-~~~~~~~~DGv~----~--tq~~I~PG~~~~Y~f~~ 121 (595)
-..++|||+. .|.|.|+.| ++++|+.|... ..+.+|++|. .+ .--..||.+ . ....|.|||+++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~-~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDF-IQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCE-EEEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeE-EEEccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 3678999995 699999885 99999999976 4578998876 33 224679943 2 33669999999999999
Q ss_pred CCceeeeEE-ccCcc--hhhhcCceeeE-EEeccC--CC----CCCCCCCC----------CceeEeeeccccccHHHHH
Q 007633 122 KDQIGSFFY-FPSLD--FQRAAGGYGGI-IINNRD--VI----PLPFAVPD----------GDITIFISDWYTKSHKKLR 181 (595)
Q Consensus 122 ~~~~Gt~wY-H~H~~--~q~~~Gl~G~l-iV~~~~--~~----~~~~~~~d----------~e~~l~l~d~~~~~~~~l~ 181 (595)
++.+|.++. .+-.. .....+...++ ...... .. ..|..... .+..+.+..
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~---------- 376 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAG---------- 376 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEE----------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEe----------
Confidence 644676332 11110 00000111222 222111 00 01100000 001111110
Q ss_pred HHHhCCCCCCCCCeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCc---
Q 007633 182 KDVENGVDLGVPDGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGS--- 258 (595)
Q Consensus 182 ~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~--- 258 (595)
.........++|||+.+. +...+.++.|++++|+|.|.+.. .|.||||||.|+|++.++.
T Consensus 377 -----~~~~~g~~~~~iNg~~~~-----------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~ 439 (513)
T 2wsd_A 377 -----TQDEYGRPVLLLNNKRWH-----------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIA 439 (513)
T ss_dssp -----EECTTSCEEEEETTBCTT-----------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHH
T ss_pred -----ecCCCCCceEeECCccCC-----------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccc
Confidence 000001125689999862 22457899999999999998764 8999999999999998751
Q ss_pred ------------c-e-----eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 259 ------------Y-T-----VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 259 ------------~-~-----~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
. . ++...|++.|.||+++.|.+++++.+| .|.++++...
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG-~w~~HCHil~ 496 (513)
T 2wsd_A 440 RYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCHALE 496 (513)
T ss_dssp HHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE-EEEEEESCHH
T ss_pred cccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC-CEEEEcCChh
Confidence 0 0 234789999999999999999976788 9999998754
No 75
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.01 E-value=5.3e-10 Score=100.30 Aligned_cols=94 Identities=11% Similarity=0.015 Sum_probs=71.0
Q ss_pred EEecCCCcEEEEEEEcCCCc-cceeeecCceEEEE------EEeCCccCCCCCCCCCC--CCCCcccEEEeCCCcEEEEE
Q 007633 434 LINGTYKGFMEIIFQNNDTT-VQSYHMDGYAFFVV------GMDFGVWTENSRGTYNK--WDGVARSTTQVFPGAWTAIL 504 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~-~HP~HlHG~~F~Vl------~~g~G~~~~~~~~~~n~--~~p~~rDTv~v~p~g~~~ir 504 (595)
.+.++.|+.|.|+|.|.+.. .|.||+|+..+.+. ++..|..+ .+.. ....++|+..|.|+....+.
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~-----~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAA-----NYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGG-----TTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccc-----cccCcccccccccccccCCCCEEEEE
Confidence 46789999999999999888 89999998653110 00001000 0111 12346789999999999999
Q ss_pred EEecCcceeEEeeccccceeccceEEEEE
Q 007633 505 VYLDNAGIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 505 f~adNPG~W~~HCHil~H~~~GM~~~~~V 533 (595)
|.+++||.|.||||+..|+. ||+..+.|
T Consensus 111 f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 111 FTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred EECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 99999999999999999999 99999887
No 76
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.00 E-value=6.9e-10 Score=94.32 Aligned_cols=85 Identities=14% Similarity=0.004 Sum_probs=65.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe-cCcc
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL-DNAG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a-dNPG 511 (595)
..+.++.|+.|.| .|.+...|++|+||..|... .|... +....++..+.||+...++|.+ +.||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~~~----------~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKELA----------DKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHHHH----------HHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---ccccc----------ccccccccccCCCCeEEEEEecCCCCe
Confidence 4578899999876 48877889999999876320 01000 0112577899999999999998 7999
Q ss_pred eeEEeeccccceeccceEEEEEe
Q 007633 512 IWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.|.|||| .|..+||...+.|.
T Consensus 84 ~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 84 TYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--CchhcCCEEEEEEc
Confidence 9999999 58999999999885
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.94 E-value=2.9e-09 Score=95.48 Aligned_cols=90 Identities=12% Similarity=0.084 Sum_probs=67.6
Q ss_pred CCCCCeEEeecCCEEEEEEEECCCC-CceeeeCCccC-----------------CCCCCCCCC-CCCCCccCCCCeEEEE
Q 007633 58 QFPGPILNVTTNWNVVVNVKNDLDE-PLLLTWNGVQH-----------------RKNSWQDGV-LGTNCPIPAGWNWTYQ 118 (595)
Q Consensus 58 ~~PgP~I~v~~Gd~v~v~v~N~l~~-~~~iH~HG~~~-----------------~~~~~~DGv-~~tq~~I~PG~~~~Y~ 118 (595)
+|--+.|+|++||+|+++++|.-.. ++.++.|+... ...+..+.. ......|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 4445799999999999999999777 88888887421 000000000 0112348999999999
Q ss_pred EEECCceeeeEEccCcchhhhcCceeeEEEe
Q 007633 119 FQVKDQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 119 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
|++ +++|+|+||||...|.. ||.|.|+|.
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 998 58999999999988888 999999984
No 78
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.91 E-value=1.2e-07 Score=104.20 Aligned_cols=241 Identities=10% Similarity=0.034 Sum_probs=146.2
Q ss_pred EEEEEcCCCC----------------CCeEEeecCCEEEEEEEECCC-CCceeeeCCccCCCCCCCCCCCC-----CCCc
Q 007633 51 QVIGINGQFP----------------GPILNVTTNWNVVVNVKNDLD-EPLLLTWNGVQHRKNSWQDGVLG-----TNCP 108 (595)
Q Consensus 51 ~~~~~Ng~~P----------------gP~I~v~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DGv~~-----tq~~ 108 (595)
..++|||+-. -++|+|++|+++++|+.|... ....+|.+|..+.- -..||.+. ....
T Consensus 226 d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l~ 304 (580)
T 3sqr_A 226 ENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTLL 304 (580)
T ss_dssp SEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSEE
T ss_pred ceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEEE
Confidence 4688999742 379999999999999999975 45689999876532 45789762 3456
Q ss_pred cCCCCeEEEEEEECCceeeeEEccCcch-----hhhcCceeeEEEeccCCCCCCCCCCCCcee-Eeeec--cccccHH--
Q 007633 109 IPAGWNWTYQFQVKDQIGSFFYFPSLDF-----QRAAGGYGGIIINNRDVIPLPFAVPDGDIT-IFISD--WYTKSHK-- 178 (595)
Q Consensus 109 I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~-----q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~-l~l~d--~~~~~~~-- 178 (595)
|.|||+++..+++++..|.||-...... +.. +..-+++..+......|-... .+.. ..+.+ .......
T Consensus 305 i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~-~~~~aiL~Y~~~~~~~P~~~~-~~~~~~~~~~~~~~L~P~~~~ 382 (580)
T 3sqr_A 305 IGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEA-ANATGILRYDSSSIANPTSVG-TTPRGTCEDEPVASLVPHLAL 382 (580)
T ss_dssp ECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTG-GGCEEEEESSTTCCCCCCCCC-CCCCCCSCCSCGGGCCBSSCC
T ss_pred EccceEEEEEEEeCCCCCeEEEEEecccccCccCCC-CceEEEEEECCCCCCCCCCCC-CCccchhhcccccccccCCCC
Confidence 9999999999999756899999987532 111 112233333322111111100 0000 00000 0000000
Q ss_pred HHH------HHHhCCCCCCCCCeEEEcCCCCCCCCCCC------CCCC---CCceeEEEe----cCcEEEEEEEEeCC-C
Q 007633 179 KLR------KDVENGVDLGVPDGILINGLGPYRYDAAI------VPDG---IPYQLINVE----PGKTYRLRVHNVGI-S 238 (595)
Q Consensus 179 ~l~------~~~~~g~~~~~~d~~liNG~~~~~~~~~~------~~~~---~~~~~l~v~----~G~~~rlRliNag~-~ 238 (595)
... ..+..+ ......+.|||..+..-...+ .+.. .....+.+. .|+++.|.|-|.+. .
T Consensus 383 ~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~ 460 (580)
T 3sqr_A 383 DVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFG 460 (580)
T ss_dssp BCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSC
T ss_pred CCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccc
Confidence 000 000000 001124678998753110100 0100 011234443 59999999999872 2
Q ss_pred ceeeEEEeCCceeEEeec-Cc-----------ceeeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 239 TSLNFRIQNHNLLLVETE-GS-----------YTVQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 239 ~~~~~~i~gh~~~via~D-G~-----------~~~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
..|+||+|||.|+|++.+ |. +..|...|++.+.+|+...+.++++ +|| .+.++++...
T Consensus 461 ~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG-~W~~HCHi~~ 530 (580)
T 3sqr_A 461 IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPG-SWLLHCHIAW 530 (580)
T ss_dssp CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCE-EEEEEECSHH
T ss_pred cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCe-eeEEEECcHH
Confidence 489999999999999983 32 2357889999999999999999998 678 8889998754
No 79
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.88 E-value=1.4e-08 Score=91.11 Aligned_cols=92 Identities=16% Similarity=0.117 Sum_probs=67.7
Q ss_pred CCCCCeEEeecCCEEEEEEEE--CCCCCceeeeCCcc------------C----CCCCCCCCCC--CCCCccCCCCeEEE
Q 007633 58 QFPGPILNVTTNWNVVVNVKN--DLDEPLLLTWNGVQ------------H----RKNSWQDGVL--GTNCPIPAGWNWTY 117 (595)
Q Consensus 58 ~~PgP~I~v~~Gd~v~v~v~N--~l~~~~~iH~HG~~------------~----~~~~~~DGv~--~tq~~I~PG~~~~Y 117 (595)
+|--+.|+|++||+|+++++| ..+..+.++.+... . ..-+..|... .....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 344479999999999999999 66778887776310 0 0000001111 11245899999999
Q ss_pred EEEECCceeeeEEccCcchhhhcCceeeEEEec
Q 007633 118 QFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 118 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
.|++ +.+|+|||||+...|...||.|.|+|.|
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 5899999999998888899999999974
No 80
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.80 E-value=1.3e-08 Score=85.67 Aligned_cols=79 Identities=13% Similarity=0.195 Sum_probs=64.8
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcc
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 135 (595)
|..|--..|++++||+|++.++|....++.+...+... ...+.||++.+|.|+. +++|+|.|+|.
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~-- 86 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICR-- 86 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECT--
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECc--
Confidence 55554468999999999999999987777777665532 1357899999999998 68999999997
Q ss_pred hhhhcCceeeEEEe
Q 007633 136 FQRAAGGYGGIIIN 149 (595)
Q Consensus 136 ~q~~~Gl~G~liV~ 149 (595)
.|...||.|.|+|+
T Consensus 87 ~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 YHLLKGMEGKVIVK 100 (100)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred cccCCCCEEEEEEC
Confidence 46678999999995
No 81
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.78 E-value=5.5e-09 Score=87.53 Aligned_cols=76 Identities=18% Similarity=0.268 Sum_probs=59.2
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC-----CCCCccCCCCeEEEEEEECCceeeeEEccCcch
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL-----GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDF 136 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 136 (595)
+.|++++||+|+ ++|..+.++++|+|+.... +|.. .....+.||+++++.|. ++|+|+|||+ .
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~ 85 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--P 85 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--G
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--C
Confidence 689999999875 5898778999999986321 2211 01245899999999873 6999999999 6
Q ss_pred hhhcCceeeEEEe
Q 007633 137 QRAAGGYGGIIIN 149 (595)
Q Consensus 137 q~~~Gl~G~liV~ 149 (595)
|...||.|.|+|.
T Consensus 86 H~~~gM~G~i~V~ 98 (98)
T 2plt_A 86 HQGAGMVGKIIVQ 98 (98)
T ss_dssp GGGGTCEEEEEEC
T ss_pred ccccCCeEEEEEC
Confidence 7778999999984
No 82
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.73 E-value=5.5e-09 Score=87.57 Aligned_cols=81 Identities=16% Similarity=0.234 Sum_probs=58.4
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-+.|++++||+|++ .|....++.+|.++....+. ..++.......+.||+++++.| +++|+|+|||+ .|...
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 36899999998765 58766789999887532100 0000001124589999999988 47999999999 67778
Q ss_pred CceeeEEEe
Q 007633 141 GGYGGIIIN 149 (595)
Q Consensus 141 Gl~G~liV~ 149 (595)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 83
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.73 E-value=1.3e-07 Score=105.60 Aligned_cols=92 Identities=5% Similarity=-0.084 Sum_probs=74.5
Q ss_pred CeEEEcCCCCCCCCCCCCCCCCCceeEEEecCcEEEEEEEEeCCCceeeEEEeCCceeEEeecCcce-------------
Q 007633 194 DGILINGLGPYRYDAAIVPDGIPYQLINVEPGKTYRLRVHNVGISTSLNFRIQNHNLLLVETEGSYT------------- 260 (595)
Q Consensus 194 d~~liNG~~~~~~~~~~~~~~~~~~~l~v~~G~~~rlRliNag~~~~~~~~i~gh~~~via~DG~~~------------- 260 (595)
..+.+||+.+. +...+.++.|++++|.|.|.+.. .|.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~-----------~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~ 526 (612)
T 3gyr_A 459 KTYRRTARTFN-----------DGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTP 526 (612)
T ss_dssp EEEEEEECSTT-----------SCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSC
T ss_pred ccccccCccCC-----------CCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccc
Confidence 45778888762 34678999999999999998875 899999999999998765321
Q ss_pred --------------eeeeeeEEEEeccceEEEEEEeCCCCCcceEEEEeecc
Q 007633 261 --------------VQQNYTNMDIHVGQSFSFLVTTDQNASSDYYIVASPRF 298 (595)
Q Consensus 261 --------------~p~~~d~l~i~pGqR~dvlv~~~~~~g~~y~i~a~~~~ 298 (595)
++...|++.+.+|+.+.|.+++.+++| .|.++++...
T Consensus 527 ~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG-~w~~HCHil~ 577 (612)
T 3gyr_A 527 VRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYG-RFMYHCHLLE 577 (612)
T ss_dssp EEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCE-EEEEEESSHH
T ss_pred cccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCc-ceEEcCCChH
Confidence 122479999999999999999766788 8999998754
No 84
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.70 E-value=3.5e-08 Score=87.42 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=57.0
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
+..|=-+.|++++||+|++ .|..+.++++++.... +|... ....+.||++++|.| +++|+|+|||..
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455457999999999865 5887777777765421 22222 234589999999888 479999999976
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
|. ||.|.|+|+
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 33 999999984
No 85
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.70 E-value=2.9e-08 Score=81.77 Aligned_cols=74 Identities=18% Similarity=0.284 Sum_probs=56.8
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-+.|++++||+|++ .|..+.+++++.++.. ++. .....+.||+++++.| +++|+|||||+ .|...
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHRGA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCccC
Confidence 46899999999765 5876778899888731 010 0124589999998887 57999999999 56667
Q ss_pred CceeeEEEe
Q 007633 141 GGYGGIIIN 149 (595)
Q Consensus 141 Gl~G~liV~ 149 (595)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 86
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.68 E-value=2.5e-08 Score=84.75 Aligned_cols=85 Identities=14% Similarity=0.069 Sum_probs=62.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEe-cCcc
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYL-DNAG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~a-dNPG 511 (595)
..+.++.|+.|.|+ |.+...|++|+|+..+.. ..|... .....|++.+.||+...+.|.+ +.||
T Consensus 20 ~~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~---~~g~~~----------~~~~~~~~~~~pG~~~~~~f~~~~~~G 84 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA---KSADLA----------KSLSHKQLLMSPGQSTSTTFPADAPAG 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSSSCCCBEECSSSSTT---CCHHHH----------HHHCBCSCCCSTTCEEEEECCTTCCSE
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEEeCCCCcc---cccccc----------hhccccceeeCCCCEEEEEEecCCCCc
Confidence 45688999999886 777778999998764410 001000 0011356678899999898887 7999
Q ss_pred eeEEeeccccceeccceEEEEEe
Q 007633 512 IWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 512 ~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
.|.|||| .|..+||...+.|.
T Consensus 85 ~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 85 EYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999 69999999999885
No 87
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.66 E-value=5.8e-08 Score=81.88 Aligned_cols=79 Identities=6% Similarity=0.024 Sum_probs=56.9
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCC--------CCCCCCCCCccCCCCeEEEEEEECCceeeeEEcc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSW--------QDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFP 132 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~--------~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~ 132 (595)
-+.|++++||+|+ +.|....+++++.+.- .... +.+.......+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEe
Confidence 3789999999976 5688667788777631 0000 011111224589999999988 5799999999
Q ss_pred CcchhhhcCceeeEEEe
Q 007633 133 SLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 133 H~~~q~~~Gl~G~liV~ 149 (595)
+ .|..+||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 77888999999984
No 88
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.61 E-value=9.6e-08 Score=83.21 Aligned_cols=75 Identities=8% Similarity=-0.027 Sum_probs=54.3
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
..|+|++||+|++.++|. ++++..+.- .+.+|.. ...+.||++++|.| +++|+|||||. .|...|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~~--~f~~~pg~t~s~TF---~~pG~y~y~C~--~H~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGVE--SFKSKINESYTLTV---TEPGLYGVKCT--PHFGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTCC--CCBCCTTCCEEEEE---CSCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeC--CCCcCC
Confidence 699999999988777762 344433321 1223431 23457999998888 57999999999 677789
Q ss_pred ceeeEEEecc
Q 007633 142 GYGGIIINNR 151 (595)
Q Consensus 142 l~G~liV~~~ 151 (595)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 89
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.60 E-value=1.7e-07 Score=78.51 Aligned_cols=76 Identities=16% Similarity=0.249 Sum_probs=58.0
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC-------CCCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL-------GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
+.|++++||+| +++|....++++|.++... .+|.. .....+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG-
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC-
Confidence 58999999985 5588877788888887432 22321 11235799999998873 7999999999
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
.|...||.|.|+|.
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 67778999999984
No 90
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.60 E-value=1e-07 Score=79.61 Aligned_cols=76 Identities=17% Similarity=0.275 Sum_probs=56.8
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC---CCCCccCCCCeEEEEEEECCceeeeEEccCcchhh
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL---GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQR 138 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~---~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~ 138 (595)
+.|++++||+| ++.|....++.++.++... .+|.. .....+.||+++++.| +++|+|+|||+ .|.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 68999999996 5568766678877776532 12211 1124589999999988 57999999999 677
Q ss_pred hcCceeeEEEe
Q 007633 139 AAGGYGGIIIN 149 (595)
Q Consensus 139 ~~Gl~G~liV~ 149 (595)
..||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 77999999984
No 91
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.60 E-value=1.8e-07 Score=78.38 Aligned_cols=76 Identities=17% Similarity=0.277 Sum_probs=57.2
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCC-------CCCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVL-------GTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
+.|++++||+|+ ++|....+++++.++... .+|.. .....+.||+++++.| +++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~- 85 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCS- 85 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEE---CCCceEEEEcC-
Confidence 689999999865 588877788888776422 12221 1123579999999887 37999999999
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
.|..+||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 -PHQGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CCcccCCEEEEEEC
Confidence 67778999999984
No 92
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.56 E-value=1e-07 Score=83.55 Aligned_cols=76 Identities=12% Similarity=0.098 Sum_probs=53.7
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
+.|+|++||+|.+.++|. ++++..+.- .+.||. ....+.||++++|.| +.+|+|||||. .|...|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~-----~~P~g~--~~f~s~pGet~s~TF---~~pG~y~y~C~--~H~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG-----GAPEGA--ETWKGKINEEITVTL---SKPGVYMYQCA--PHVGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT-----CSCTTC--CCCBCCTTCCCEEEC---CSCEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC-----cCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CCCcCC
Confidence 799999999977666553 444333211 112332 123457999988888 57999999998 467789
Q ss_pred ceeeEEEeccC
Q 007633 142 GYGGIIINNRD 152 (595)
Q Consensus 142 l~G~liV~~~~ 152 (595)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999754
No 93
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.52 E-value=2.2e-07 Score=80.84 Aligned_cols=75 Identities=9% Similarity=-0.001 Sum_probs=54.0
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
+.|+|++||+|+. .|.. .++++..+.. .+.+|. ....+.||++++|.| +.+|+|+|||. .|...|
T Consensus 22 ~~i~V~~GDTV~f--~n~~-~~Hnv~~~~~-----~~p~g~--~~~~~~pg~t~s~TF---~~~G~y~Y~C~--~H~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKF--VPTD-KSHNAESVRE-----VWPEGV--APVKGGFSKEVVFNA---EKEGLYVLKCA--PHYGMG 86 (124)
T ss_dssp SEEEECTTCEEEE--ECSS-SSCCCEECTT-----TSCTTS--CCCBCCTTCCEEEEC---CSSEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEEE--EECC-CCccEEEeCC-----cCCCCc--cccccCCCCEEEEEe---CCCeEEEEEcC--CCCcCC
Confidence 6999999999754 4553 5665555422 112332 123467999999888 47999999996 677789
Q ss_pred ceeeEEEecc
Q 007633 142 GYGGIIINNR 151 (595)
Q Consensus 142 l~G~liV~~~ 151 (595)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 94
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.48 E-value=3.5e-07 Score=81.85 Aligned_cols=99 Identities=8% Similarity=0.010 Sum_probs=69.8
Q ss_pred EEecCCCcEEEEEEEc--CCCccceeeecCc--eEEEEEEeCCccCCCCCCCCC---CCCCCcccEEEeCCCcEEEEEEE
Q 007633 434 LINGTYKGFMEIIFQN--NDTTVQSYHMDGY--AFFVVGMDFGVWTENSRGTYN---KWDGVARSTTQVFPGAWTAILVY 506 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N--~~~~~HP~HlHG~--~F~Vl~~g~G~~~~~~~~~~n---~~~p~~rDTv~v~p~g~~~irf~ 506 (595)
.++++.|+.|.|++.| .+...|.||++.. +|.-+. ..|.+...+ ..|- -....+++|..|.||....+.|.
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAV-NTAAQNNAD-ALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHH-HHHHHTCGG-GTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhh-hhhhhhccc-ccccCccccccccccceeeCCCceeEEEEE
Confidence 4678999999999999 6678899999842 221000 000000000 0000 01134578889999999999999
Q ss_pred ecCcceeEEeeccccceeccceEEEEEe
Q 007633 507 LDNAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 507 adNPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
++.||.|.|||++..|...||...+.|.
T Consensus 112 ~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 112 TPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999998885
No 95
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.47 E-value=5.1e-07 Score=75.39 Aligned_cols=79 Identities=13% Similarity=0.010 Sum_probs=58.8
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.|+ |.+...|.+|+|+..+- |.-. .....|+..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p------g~~~----------~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGVP------ADTA----------AKLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSSC------HHHH----------HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCCCC------cccc----------ccccccccccCCCCEEEEEc--CCCeE
Confidence 45788999999886 77677899999874321 0000 00114678899998887766 89999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||| .|..+||...+.|
T Consensus 79 y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 79 YTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 4888999999887
No 96
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.43 E-value=5.6e-07 Score=75.11 Aligned_cols=80 Identities=18% Similarity=0.120 Sum_probs=59.6
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.| .|.+...|.+|+|+..+ +. ..+. ...++|+..+.||....++| +.||.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~-----------p~---~~~~-~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAI-----------PS---GVNA-DAISRDDYLNAPGETYSVKL--TAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGS-----------CT---TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCC-----------CC---cccc-ccccccceecCCCCEEEEEe--CCCeE
Confidence 4578899999987 67777789999987532 00 0000 01236788999999887755 68999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||| .|..+||...+.|
T Consensus 79 y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 79 YGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp EEEECG--GGGGGTCEEEEEE
T ss_pred EEEEcC--CccccCCeEEEEE
Confidence 999999 4888999998887
No 97
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.40 E-value=9.1e-07 Score=72.63 Aligned_cols=72 Identities=15% Similarity=0.137 Sum_probs=56.5
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.|+ |.+...|.+|+|+.. +...++..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~Gd~V~~~--n~~~~~H~v~~~~~~-----------------------~~~~~~~~~~~g~~~~~~f--~~~G~ 71 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNKLAPHNVVVEGQP-----------------------ELSHKDLAFSPGETFEATF--SEPGT 71 (91)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEETTCG-----------------------GGCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCC-----------------------ccCcccceeCCCCEEEEEe--CCCEE
Confidence 45688999999875 766678999998720 0114667888998777765 89999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||| .|..+||...+.|
T Consensus 72 y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 72 YTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEEECT--TTGGGTCEEEEEE
T ss_pred EEEEeC--CCccCCCEEEEEE
Confidence 999999 5888899998887
No 98
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.39 E-value=1.2e-06 Score=75.16 Aligned_cols=73 Identities=12% Similarity=0.184 Sum_probs=57.6
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|.+.|.+...|.|++.... -+..+.||....+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~~---------------------------~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAFG---------------------------VQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGGT---------------------------EEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCCC---------------------------ceeEeCCCCEEEEEEECCCCEEE
Confidence 467899999999999998766666554321 14578999999999999999999
Q ss_pred EEeeccccceeccceEEEEEe
Q 007633 514 NLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V~ 534 (595)
.||||+..|... |...+.|.
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEE
T ss_pred EEECCCCCchHH-CEEEEEEe
Confidence 999999655333 88888875
No 99
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.37 E-value=4.7e-07 Score=75.67 Aligned_cols=77 Identities=13% Similarity=0.089 Sum_probs=55.7
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-----CCCccCCCCeEEEEEEECCceeeeEEccCcc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-----TNCPIPAGWNWTYQFQVKDQIGSFFYFPSLD 135 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~ 135 (595)
-+.|++++||+|++ .|....++++....-. +.+|... ....+.||+++++.| +++|+|+|+|..
T Consensus 17 P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEEE--EECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEchh-
Confidence 46999999999655 5876677777765421 1223210 113578999999888 479999999985
Q ss_pred hhhhcCceeeEEEe
Q 007633 136 FQRAAGGYGGIIIN 149 (595)
Q Consensus 136 ~q~~~Gl~G~liV~ 149 (595)
|..+||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 6667999999984
No 100
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.33 E-value=1.5e-06 Score=75.70 Aligned_cols=76 Identities=12% Similarity=0.018 Sum_probs=51.5
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhc
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAA 140 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~ 140 (595)
-+.|+|++||+|+. .|.-. ++++..+ .....||.. .....||++++|.| +.+|+|+|+|. .|...
T Consensus 20 P~~i~V~~GdtV~f--~~~~~-~H~v~~~-----~~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTF--IPVDK-GHNVESI-----KDMIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCT--PHYAM 84 (123)
T ss_dssp SSEEEECTTCEEEE--EESSS-SCCCEEC-----TTCSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCC-CeEEEEe-----cccCCCCcc--ceecCCCCEEEEEe---CCCEEEEEEeC--CcccC
Confidence 36999999999754 55532 4444332 111223321 12346899888887 47999999997 47778
Q ss_pred CceeeEEEecc
Q 007633 141 GGYGGIIINNR 151 (595)
Q Consensus 141 Gl~G~liV~~~ 151 (595)
||.|.|+|.+.
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 101
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.30 E-value=2e-06 Score=72.07 Aligned_cols=71 Identities=18% Similarity=0.190 Sum_probs=59.8
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|++.|.+...|.|.+.+..+. ..+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~---------------------------~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGID---------------------------VVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTEE---------------------------EEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCcc---------------------------eeecCCcceeEEEecccCceE
Confidence 56889999999999999888888877654431 356788899999999999999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|+|.. |...||...+.|
T Consensus 82 ~y~C~~--H~~~gM~G~i~V 99 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIV 99 (100)
T ss_dssp EEECTT--TGGGTCEEEEEE
T ss_pred EEECcc--ccCCCCEEEEEE
Confidence 999986 888999988877
No 102
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.27 E-value=1.6e-06 Score=75.48 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=51.6
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
+.|+|++||+|+ +.|.-. ++++..+ .....||.. ...+.||++++|.| +.+|+|+|+|. .|...|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~-----~~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETI-----KGMAPDGAD--YVKTTVGQEAVVKF---DKEGVYGFKCA--PHYMMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEEC-----TTSSCTTCC--CCBCCTTSCEEEEC---CSCEEEEEECS--TTTTTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEe-----cccCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeC--CccccC
Confidence 699999999965 555532 4443332 111223321 13457999988887 47999999997 477789
Q ss_pred ceeeEEEecc
Q 007633 142 GYGGIIINNR 151 (595)
Q Consensus 142 l~G~liV~~~ 151 (595)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 103
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.25 E-value=8.5e-07 Score=73.86 Aligned_cols=77 Identities=10% Similarity=0.135 Sum_probs=56.6
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+ |.+...|.+++++..+. .+. .....++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~~------------~~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ESA------------PALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SCH------------HHHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----ccc------------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 4678999998876 77667899998865440 000 00113556778888777765 899999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|||+ .|..+||...+.|
T Consensus 79 ~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp EEECS--STTTTTCEEEEEE
T ss_pred EEEcc--ChhhcCCEEEEEE
Confidence 99999 5999999998887
No 104
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.24 E-value=2.3e-06 Score=75.12 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=61.8
Q ss_pred CCCCCeEEeecC-CEEEEEEEECCCCC-----ce--eeeCCccC-------CCC------CCCCCCCC-CCCccCCCCeE
Q 007633 58 QFPGPILNVTTN-WNVVVNVKNDLDEP-----LL--LTWNGVQH-------RKN------SWQDGVLG-TNCPIPAGWNW 115 (595)
Q Consensus 58 ~~PgP~I~v~~G-d~v~v~v~N~l~~~-----~~--iH~HG~~~-------~~~------~~~DGv~~-tq~~I~PG~~~ 115 (595)
+|=-..|.|++| |+|.|+|+|....+ +. |--+|..+ ... +..|.--. ....|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343358999999 99999999986543 33 22222110 000 00111111 12358999999
Q ss_pred EEEEEEC--CceeeeEEccCcchhhhcCceeeEEEec
Q 007633 116 TYQFQVK--DQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 116 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
++.|+++ .++|+|||+|....|+. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999984 37999999999877877 8999999963
No 105
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.22 E-value=3.3e-06 Score=70.51 Aligned_cols=82 Identities=13% Similarity=0.033 Sum_probs=58.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.| .|.+...|.+|+++..|- .| ++. ... ...+|++.+.||....+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~-----~~~--~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDV-----TKI--SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCH-----HHH--SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccc-----ccc--cccccceeeCCCCEEEEEe--CCCcE
Confidence 4578899999877 677777899999975431 01 000 000 0124566788898877765 69999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||+ .|..+||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 80 YKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CccccCCEEEEEE
Confidence 999999 4888999998887
No 106
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.13 E-value=3.9e-06 Score=76.67 Aligned_cols=97 Identities=13% Similarity=0.050 Sum_probs=63.8
Q ss_pred EEEcC--CCCCCeEEe-ecCCEEEEEEEECCCCC-----cee--eeCCccC-------C-C----CCCCCCCCC-CCCcc
Q 007633 53 IGING--QFPGPILNV-TTNWNVVVNVKNDLDEP-----LLL--TWNGVQH-------R-K----NSWQDGVLG-TNCPI 109 (595)
Q Consensus 53 ~~~Ng--~~PgP~I~v-~~Gd~v~v~v~N~l~~~-----~~i--H~HG~~~-------~-~----~~~~DGv~~-tq~~I 109 (595)
+..++ +|=-..|.| +.||+|+|+|+|....+ +.+ --+|... . + -+..|.-.. ....|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 44454 453358999 99999999999997653 332 2222100 0 0 000111001 12358
Q ss_pred CCCCeEEEEEEEC-CceeeeEEccCcchhhhcCceeeEEEec
Q 007633 110 PAGWNWTYQFQVK-DQIGSFFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 110 ~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
.||+++++.|+++ -++|+|||+|....|.. ||.|.|+|.+
T Consensus 127 ~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999999984 16999999999877877 8999999963
No 107
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.06 E-value=2.3e-05 Score=66.30 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=53.8
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCC-CCCccCCCCeEEEEEEECCceeeeEEccCc
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLG-TNCPIPAGWNWTYQFQVKDQIGSFFYFPSL 134 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~ 134 (595)
+..|=-+.|+|++||+|++ .|....+++++..... .|... ....+.||+++++.| +++|+|+|+|..
T Consensus 28 ~~~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 3344346999999999765 5876656655544321 11111 123578999999888 479999999976
Q ss_pred chhhhcCceeeEEEe
Q 007633 135 DFQRAAGGYGGIIIN 149 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~ 149 (595)
|. ||.|.|+|+
T Consensus 96 --H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 --HP--FMRGKVIVE 106 (106)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --CC--CCEEEEEEC
Confidence 33 999999984
No 108
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.02 E-value=5e-06 Score=69.81 Aligned_cols=85 Identities=12% Similarity=-0.072 Sum_probs=56.9
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.|+ |.+...|.++++.-... .+.+...+ .......+++.+.||....+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~-----~~~~~~~~~~~~~pG~~~~~tf--~~~G~ 82 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL-----KAASMDENDLLSEDEPSFKAKV--STPGT 82 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH-----HHTSCCTTCCBBTTBCEEEECC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh-----hcccccccceecCCCCEEEEEe--CCCeE
Confidence 45788999999876 77777899998721100 00000000 0001123566788888877766 89999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||+ .|..+||...+.|
T Consensus 83 y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 83 YTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp EEEECS--TTGGGTCEEEEEE
T ss_pred EEEEeC--CCcccCCeEEEEE
Confidence 999999 5999999998887
No 109
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.99 E-value=2.5e-05 Score=83.62 Aligned_cols=89 Identities=16% Similarity=0.105 Sum_probs=65.8
Q ss_pred EEEEEEcCCCCCCeEEeecCCEEEEEEEECC---CCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCcee
Q 007633 50 QQVIGINGQFPGPILNVTTNWNVVVNVKNDL---DEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIG 126 (595)
Q Consensus 50 ~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l---~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~G 126 (595)
..+...+-.|--+.|+|++||+|++.++|.. +..+++...+.. + ...+.||++.++.|++ +++|
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslG---------I---K~DaiPGrtnsvtFta-dkPG 612 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHG---------V---SMEISPQQTSSITFVA-DKPG 612 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---------E---EEEECTTCEEEEEEEC-CSCE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCC---------c---eeeeCCCCeEEEEEEc-CCCE
Confidence 4455566677778999999999999999973 344444433321 1 1357899999999999 6899
Q ss_pred eeEEccCcc-hhhhcCceeeEEEecc
Q 007633 127 SFFYFPSLD-FQRAAGGYGGIIINNR 151 (595)
Q Consensus 127 t~wYH~H~~-~q~~~Gl~G~liV~~~ 151 (595)
+|||||+.- .....+|.|.|+|+|+
T Consensus 613 vY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 613 LHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEECCCcCCCCcccceEEEEEecC
Confidence 999999842 2222479999999873
No 110
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.97 E-value=2.6e-05 Score=68.32 Aligned_cols=92 Identities=16% Similarity=0.074 Sum_probs=59.7
Q ss_pred CCCCCeEEe-ecCCEEEEEEEECCCCC-----ceee--eCCccC-------CCC------CCCCCCCC-CCCccCCCCeE
Q 007633 58 QFPGPILNV-TTNWNVVVNVKNDLDEP-----LLLT--WNGVQH-------RKN------SWQDGVLG-TNCPIPAGWNW 115 (595)
Q Consensus 58 ~~PgP~I~v-~~Gd~v~v~v~N~l~~~-----~~iH--~HG~~~-------~~~------~~~DGv~~-tq~~I~PG~~~ 115 (595)
+|=-..|.| ++||+|.|+++|....+ +.+- -+|..+ ... +..|.--. ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 343358999 99999999999997553 3322 222100 000 00111101 12358999999
Q ss_pred EEEEEEC-Cceee-eEEccCcchhhhcCceeeEEEec
Q 007633 116 TYQFQVK-DQIGS-FFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 116 ~Y~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
+..|+++ -.+|+ |||+|....|.. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 9999984 04655 999999887877 8999999963
No 111
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.91 E-value=3.5e-05 Score=67.37 Aligned_cols=91 Identities=14% Similarity=0.077 Sum_probs=59.8
Q ss_pred CCCCCeEEe-ecCCEEEEEEEECCCCC-----ceeee--CCccC-------CCCCCCCCCC------C-CCCccCCCCeE
Q 007633 58 QFPGPILNV-TTNWNVVVNVKNDLDEP-----LLLTW--NGVQH-------RKNSWQDGVL------G-TNCPIPAGWNW 115 (595)
Q Consensus 58 ~~PgP~I~v-~~Gd~v~v~v~N~l~~~-----~~iH~--HG~~~-------~~~~~~DGv~------~-tq~~I~PG~~~ 115 (595)
+|=-..|.| ++||+|+|+++|....+ +.+-. .|..+ .....+|=++ . ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 443358999 99999999999996553 43322 22110 0000111111 1 11248999999
Q ss_pred EEEEEECC-ceee-eEEccCcchhhhcCceeeEEEe
Q 007633 116 TYQFQVKD-QIGS-FFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 116 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
++.|.++. .+|+ |||+|....|.. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999840 4776 999999888887 899999984
No 112
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.90 E-value=3.8e-05 Score=67.12 Aligned_cols=92 Identities=18% Similarity=0.147 Sum_probs=60.4
Q ss_pred CCCCCeEEe-ecCCEEEEEEEECCCCC-----ceeeeC--C---------cc----CCCCCCCCCCCC-CCCccCCCCeE
Q 007633 58 QFPGPILNV-TTNWNVVVNVKNDLDEP-----LLLTWN--G---------VQ----HRKNSWQDGVLG-TNCPIPAGWNW 115 (595)
Q Consensus 58 ~~PgP~I~v-~~Gd~v~v~v~N~l~~~-----~~iH~H--G---------~~----~~~~~~~DGv~~-tq~~I~PG~~~ 115 (595)
+|=-..|.| +.|++|+|+++|....+ +.+-+- + +. ...-+..|.--. ....|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 443458999 99999999999997553 433221 1 00 000000111101 12347999999
Q ss_pred EEEEEECC-ceee-eEEccCcchhhhcCceeeEEEec
Q 007633 116 TYQFQVKD-QIGS-FFYFPSLDFQRAAGGYGGIIINN 150 (595)
Q Consensus 116 ~Y~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 150 (595)
++.|.++. ++|+ |+|+|....|.. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 99999841 5885 999999888877 9999999963
No 113
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.90 E-value=2.4e-05 Score=67.96 Aligned_cols=73 Identities=12% Similarity=-0.003 Sum_probs=49.3
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCcchhhhcC
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLDFQRAAG 141 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~~~q~~~G 141 (595)
+.|+|++||+|.+ .|... .++++... ....+|. ....+.||++++|.| +++|+|+|+|.. |..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~--~~~~~~~g~t~~~tF---~~~G~y~y~C~~--H~~-- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTP--HPF-- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEEETT--EEE--
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCc--ceeecCCCCEEEEEe---CCCEEEEEEeCC--Ccc--
Confidence 6999999998655 56533 44444332 1112232 123457999998888 479999999986 332
Q ss_pred ceeeEEEecc
Q 007633 142 GYGGIIINNR 151 (595)
Q Consensus 142 l~G~liV~~~ 151 (595)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999874
No 114
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.89 E-value=3.1e-05 Score=64.48 Aligned_cols=82 Identities=13% Similarity=0.023 Sum_probs=57.2
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.| .|.+...|.++++...+- .| .+ ..+. ...++.+.+.||....+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~-----~~~~--~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VD-----ASKI--SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CC-----HHHH--CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-cc-----cccc--ccccCccccCCCCEEEEEE--CCCce
Confidence 4678899998877 677777899999875320 00 00 0000 0123445678888777755 69999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|||+ .|..+||...+.|
T Consensus 80 y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 80 YSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEEECG--GGTTTTCEEEEEE
T ss_pred EEEEcC--CCcccCCEEEEEE
Confidence 999999 4888999998887
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.77 E-value=6.5e-05 Score=82.07 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=61.5
Q ss_pred eEEecCCCcEEEEEEEcCCC---ccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecC
Q 007633 433 SLINGTYKGFMEIIFQNNDT---TVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDN 509 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~---~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adN 509 (595)
+.+.++.|+.|+|.+.|.+. ..|.|+++++.+. ..+.||....+.|.++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 45788999999999999743 3799998876432 36788999999999999
Q ss_pred cceeEEeecccc-ceeccceEEEEEecCC
Q 007633 510 AGIWNLRAENLD-TWYLGQEVYVNVINPE 537 (595)
Q Consensus 510 PG~W~~HCHil~-H~~~GM~~~~~V~~~~ 537 (595)
||.|.||||..- ..|.||...+.|.+++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 999999999321 1235999999988653
No 116
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.71 E-value=6.3e-05 Score=63.44 Aligned_cols=71 Identities=11% Similarity=0.045 Sum_probs=49.4
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+ |.+...|.+|+|... .|. ..++ .-.+.||....+.| +.||.+
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~------~~~~--------~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE------AALK--------GPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------SCEE--------CCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc------cccc--------ccccCCCCEEEEEe--CCCEEE
Confidence 5678899999885 777778999988521 111 0011 11366777665554 899999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999998 43 89888876
No 117
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.57 E-value=0.00022 Score=64.50 Aligned_cols=83 Identities=12% Similarity=0.037 Sum_probs=59.1
Q ss_pred eEEecCCCcEEEEEEEcCC-CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEE-------EeCCCc--EEE
Q 007633 433 SLINGTYKGFMEIIFQNND-TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTT-------QVFPGA--WTA 502 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~-~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv-------~v~p~g--~~~ 502 (595)
+.+.++.|+.|.+.+.|.+ ...|-+-++.. +. .+.. . |...+.+ .|.||+ ...
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~-------~~-~~~~-----~----~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKK-------GP-PYAV-----M----PVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESC-------CS-CCCS-----S----CCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeec-------Cc-chhc-----c----ccccccccccccccccCCCCceEEE
Confidence 3578999999999999974 45566655421 10 0100 0 0011211 567888 889
Q ss_pred EEEEecCcceeEEeeccccceeccceEEEEE
Q 007633 503 ILVYLDNAGIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 503 irf~adNPG~W~~HCHil~H~~~GM~~~~~V 533 (595)
+.|.+ .||.+.||||+--|..+||-..+.|
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99999 9999999999989999999998876
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.14 E-value=0.0013 Score=56.56 Aligned_cols=88 Identities=17% Similarity=0.231 Sum_probs=56.1
Q ss_pred CCCCCeEEeec-CCEEEEEEEECCCCC-----ce--ee---------eCCccCC-CCCC---CCCCCC-CCCccCCCCeE
Q 007633 58 QFPGPILNVTT-NWNVVVNVKNDLDEP-----LL--LT---------WNGVQHR-KNSW---QDGVLG-TNCPIPAGWNW 115 (595)
Q Consensus 58 ~~PgP~I~v~~-Gd~v~v~v~N~l~~~-----~~--iH---------~HG~~~~-~~~~---~DGv~~-tq~~I~PG~~~ 115 (595)
+|--..|.|+. |++|+|+|+|....+ +. |- --|+..- ...+ .|.--. ...-|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 44456999986 999999999997543 32 21 1122110 0011 121111 12338999999
Q ss_pred EEEEEEC--CceeeeEEccCcchhhhcCceeeEEEe
Q 007633 116 TYQFQVK--DQIGSFFYFPSLDFQRAAGGYGGIIIN 149 (595)
Q Consensus 116 ~Y~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 149 (595)
+..|+++ .++|+|.|.|. .|. ||.|.|+|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999985 26999999999 666 999999983
No 119
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=96.96 E-value=0.0025 Score=52.69 Aligned_cols=80 Identities=16% Similarity=0.134 Sum_probs=54.0
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.|+ |.+...|.+.++... + +. .++. .....+...+.||....+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~~----------~-p~---g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDEDA----------V-PA---GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTTS----------S-CT---TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCCC----------C-cc---cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 46788999999886 666667877665411 1 00 0000 00113446788888777765 89999
Q ss_pred eEEeeccccceeccceEEEEE
Q 007633 513 WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V 533 (595)
|.|+|-+ |..+||...+.|
T Consensus 79 y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEE
T ss_pred EEEEchh--hccCCCEEEEEE
Confidence 9999997 888899988877
No 120
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.91 E-value=0.0045 Score=54.44 Aligned_cols=73 Identities=14% Similarity=0.190 Sum_probs=54.0
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc---chhh
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL---DFQR 138 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~---~~q~ 138 (595)
..|.++.|++|++.++|. +..+++..-.+ |. +.-+.||+.-++.|++ +++|+|+|+|.. ..|
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~Hsf~ip~~---------~~---k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H- 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVIHGFHVEGT---------NI---NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH- 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSCEEEEETTS---------SC---EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS-
T ss_pred CEEEEcCCCEEEEEEEeC-CccceEEecCC---------Cc---eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc-
Confidence 489999999999999997 44444332222 11 1346899988999998 689999999964 234
Q ss_pred hcCceeeEEEec
Q 007633 139 AAGGYGGIIINN 150 (595)
Q Consensus 139 ~~Gl~G~liV~~ 150 (595)
.+|.|.++|.+
T Consensus 125 -~~M~g~v~V~~ 135 (135)
T 2cua_A 125 -QNMFGTIVVKE 135 (135)
T ss_dssp -TTCEEEEEEEC
T ss_pred -CCCEEEEEEEC
Confidence 48999999864
No 121
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.85 E-value=0.0009 Score=58.28 Aligned_cols=75 Identities=11% Similarity=0.008 Sum_probs=49.8
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..++++.|+.|.|++.|. .|.+..+.. .+ |..... +.+.||.... ++++.||.
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~~~-----------f~s~pGet~s--~TF~~pG~ 75 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGAET-----------WKGKINEEIT--VTLSKPGV 75 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTCCC-----------CBCCTTCCCE--EECCSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCccc-----------eecCCCCEEE--EEeCCCeE
Confidence 357889999999987763 455554321 01 111001 1224666544 44589999
Q ss_pred eEEeeccccceeccceEEEEEecC
Q 007633 513 WNLRAENLDTWYLGQEVYVNVINP 536 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~~~ 536 (595)
|.|||-. |..+||-..+.|.++
T Consensus 76 y~y~C~~--H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 76 YMYQCAP--HVGMGMIGAIVVGEP 97 (127)
T ss_dssp EEEECTT--TGGGTCEEEEEESSC
T ss_pred EEEEeCC--CCcCCcEEEEEECcC
Confidence 9999995 899999999999865
No 122
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=96.83 E-value=0.0012 Score=57.22 Aligned_cols=76 Identities=12% Similarity=0.153 Sum_probs=50.9
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..++++.|+.|.|+..+ ..|.+..+.. .+. .. .+.+.+.+|....+. ++.||.
T Consensus 22 ~~i~V~~GDTV~f~n~~---~~Hnv~~~~~----------~~p-~g-----------~~~~~~~pg~t~s~T--F~~~G~ 74 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD---KSHNAESVRE----------VWP-EG-----------VAPVKGGFSKEVVFN--AEKEGL 74 (124)
T ss_dssp SEEEECTTCEEEEECSS---SSCCCEECTT----------TSC-TT-----------SCCCBCCTTCCEEEE--CCSSEE
T ss_pred CEEEECCCCEEEEEECC---CCccEEEeCC----------cCC-CC-----------ccccccCCCCEEEEE--eCCCeE
Confidence 35788999999988554 4676665421 111 10 111233466655554 489999
Q ss_pred eEEeeccccceeccceEEEEEecCC
Q 007633 513 WNLRAENLDTWYLGQEVYVNVINPE 537 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~~~~ 537 (595)
|.|||-. |..+||-..+.|.+|.
T Consensus 75 y~Y~C~~--H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 75 YVLKCAP--HYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEEECTT--TGGGTCEEEEEESSCT
T ss_pred EEEEcCC--CCcCCCEEEEEECCCC
Confidence 9999974 9999999999998764
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.80 E-value=0.0026 Score=53.45 Aligned_cols=71 Identities=11% Similarity=-0.006 Sum_probs=48.1
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+ |.+...|.+++.... .|. ..+ ++-.+.+|....+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~~------~~~--------~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE------DAF--------RGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------SCE--------ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCC-------CCc------ccc--------cccccCCCCEEEEEe--CCCEEE
Confidence 5678999999887 777767877665421 000 001 112456777666655 899999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|+|-+ |. ||...+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999988 54 99888876
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.67 E-value=0.0034 Score=55.02 Aligned_cols=71 Identities=11% Similarity=-0.006 Sum_probs=48.9
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+ |.+...|.+++.... .|. ..+ ++-.+.||....+.| +.||.+
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~------~~~--------~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE------DAF--------RGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS------SCE--------ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc------ccc--------cccccCCCCEEEEEc--CCCEEE
Confidence 5678999999886 777777888775321 000 001 122456777766665 799999
Q ss_pred EEeeccccceeccceEEEEE
Q 007633 514 NLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V 533 (595)
.|||-+ |. ||...+.|
T Consensus 116 ~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--Cc--CCEEEEEE
Confidence 999988 54 99988877
No 125
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.59 E-value=0.003 Score=54.58 Aligned_cols=74 Identities=7% Similarity=0.113 Sum_probs=50.0
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..++++.|+.|.|++.|. .|.+..+.. .+ +... +.+.+.|+....+.| +.||.
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~ 73 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGL 73 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeE
Confidence 357889999999998873 355554321 11 1110 011234676555555 89999
Q ss_pred eEEeeccccceeccceEEEEEec
Q 007633 513 WNLRAENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~~ 535 (595)
|.|+|-. |..+||-..+.|.+
T Consensus 74 y~y~C~~--H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 74 YGVKCTP--HFGMGMVGLVQVGD 94 (123)
T ss_dssp EEEECGG--GTTTTCEEEEEESS
T ss_pred EEEEeCC--CCcCCcEEEEEECC
Confidence 9999995 99999999999986
No 126
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.51 E-value=0.014 Score=53.03 Aligned_cols=81 Identities=12% Similarity=0.123 Sum_probs=59.0
Q ss_pred cCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc-
Q 007633 56 NGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL- 134 (595)
Q Consensus 56 Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~- 134 (595)
+-+|--..|.++.|++|++.++|. +..+++..-++.. +.-+.||+..++.|++ +++|+|++.|..
T Consensus 87 ~~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi------------k~da~PG~~n~~~~~~-~kpG~y~g~Cse~ 152 (168)
T 3s8f_B 87 AFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGTNI------------NVEVLPGEVSTVRYTF-KRPGEYRIICNQY 152 (168)
T ss_dssp TTEEESSSEEEETTSEEEEEEECS-SSCEEEEETTSSC------------EEEECTTBCEEEEEEC-CSCEEEEEECCSC
T ss_pred eceEecCEEEEeCCCeEEEEEecC-CceEEEEECCCCe------------EEEecCCceeEEEEEe-CCCEEEEEECCcC
Confidence 333333589999999999999997 5555544333211 2346799999999998 689999999983
Q ss_pred chhhhcCceeeEEEec
Q 007633 135 DFQRAAGGYGGIIINN 150 (595)
Q Consensus 135 ~~q~~~Gl~G~liV~~ 150 (595)
-.....+|.|-++|++
T Consensus 153 CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 153 CGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CSTTGGGCEEEEEEEC
T ss_pred CCCCcCCCEEEEEEeC
Confidence 3344458999999973
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.26 E-value=0.016 Score=62.37 Aligned_cols=76 Identities=9% Similarity=-0.004 Sum_probs=61.0
Q ss_pred eeEEecCCCcEEEEEEEcCC---CccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEec
Q 007633 432 TSLINGTYKGFMEIIFQNND---TTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLD 508 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vi~N~~---~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~ad 508 (595)
...+.++.|+.|.|++.|.+ +..|.|.+.+.... +.+.||....+.|.++
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK---------------------------~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS---------------------------MEISPQQTSSITFVAD 609 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECC
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce---------------------------eeeCCCCeEEEEEEcC
Confidence 34678899999999999974 56788877664431 2678899999999999
Q ss_pred CcceeEEeeccccce-eccceEEEEEe
Q 007633 509 NAGIWNLRAENLDTW-YLGQEVYVNVI 534 (595)
Q Consensus 509 NPG~W~~HCHil~H~-~~GM~~~~~V~ 534 (595)
.||+|.+||...-|. |.+|...+.|.
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEe
Confidence 999999999975554 67888888775
No 128
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=95.66 E-value=0.036 Score=47.79 Aligned_cols=74 Identities=7% Similarity=0.077 Sum_probs=47.4
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+..+. .|.+.++- +.. +.....+ .+.||... .+.++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~-p~~~~~~-----------~~~pG~t~--~~tF~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------DMI-PEGAEKF-----------KSKINENY--VLTVTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------TCS-CTTCCCC-----------BCCTTCCE--EEECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------ccC-CCCccce-----------ecCCCCEE--EEEeCCCEEE
Confidence 56789999998876653 35555431 110 1110011 12466644 4455899999
Q ss_pred EEeeccccceeccceEEEEEecC
Q 007633 514 NLRAENLDTWYLGQEVYVNVINP 536 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V~~~ 536 (595)
.|+|-. |..+||-..+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESSS
T ss_pred EEEeCC--cccCCCEEEEEEcCC
Confidence 999985 888899999999763
No 129
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.43 E-value=0.054 Score=47.43 Aligned_cols=72 Identities=14% Similarity=0.191 Sum_probs=51.7
Q ss_pred EecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeE
Q 007633 435 INGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWN 514 (595)
Q Consensus 435 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~ 514 (595)
+.++.|+.|.|++.|.+ ..|.|-+=. ++ --+.+.||....+.|.++.||.+.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hsf~ip~--------------------~~-------~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHGFHVEG--------------------TN-------INVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEEEETT--------------------SS-------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccceEEecC--------------------CC-------ceeEeCCCCcEEEEEEcCCCEEEE
Confidence 46889999999999974 455543211 11 114567888888999999999999
Q ss_pred Eeecccc-ceeccceEEEEEe
Q 007633 515 LRAENLD-TWYLGQEVYVNVI 534 (595)
Q Consensus 515 ~HCHil~-H~~~GM~~~~~V~ 534 (595)
++|...- .-|.+|-..++|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9997522 2346888888876
No 130
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=95.28 E-value=0.017 Score=49.84 Aligned_cols=74 Identities=12% Similarity=0.179 Sum_probs=46.9
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|.|+..+. .|.+.++. +.+ +.... .+.+.||.... +.++.||.|
T Consensus 22 ~i~V~~GdtV~f~n~~~---~H~v~~~~----------~~~-p~~~~-----------~~~~~pG~t~~--~tF~~~G~y 74 (123)
T 1pmy_A 22 LVRLKPGDSIKFLPTDK---GHNVETIK----------GMA-PDGAD-----------YVKTTVGQEAV--VKFDKEGVY 74 (123)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECT----------TSS-CTTCC-----------CCBCCTTSCEE--EECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CcEEEEec----------ccC-CCCcc-----------ceecCCCCEEE--EEeCCCeEE
Confidence 56788999988865542 45554431 111 11000 11234666544 445899999
Q ss_pred EEeeccccceeccceEEEEEecC
Q 007633 514 NLRAENLDTWYLGQEVYVNVINP 536 (595)
Q Consensus 514 ~~HCHil~H~~~GM~~~~~V~~~ 536 (595)
.|+|-. |..+||...+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 75 GFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp EEECST--TTTTTCEEEEEESSC
T ss_pred EEEeCC--ccccCCEEEEEEcCC
Confidence 999985 888899999999753
No 131
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=94.45 E-value=0.081 Score=48.01 Aligned_cols=91 Identities=11% Similarity=0.002 Sum_probs=59.6
Q ss_pred EEec-CCCcEEEEEEEcCCCcc-----ceeeecCceEEEEEEeCCccCCC-------CCCCC-CCCC-CCcccEEEeCCC
Q 007633 434 LING-TYKGFMEIIFQNNDTTV-----QSYHMDGYAFFVVGMDFGVWTEN-------SRGTY-NKWD-GVARSTTQVFPG 498 (595)
Q Consensus 434 v~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~G~~~~~-------~~~~~-n~~~-p~~rDTv~v~p~ 498 (595)
.+++ +.|+.|.|+|.|.+... |-|-|- ..+ .++.. ....| ...+ .....+..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~-------~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVIA-------KAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEEE-------EGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEec-------cCc--chhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 4678 89999999999997652 554332 111 10000 00001 0011 122345568899
Q ss_pred cEEEEEEEec--CcceeEEeeccccceeccceEEEEEe
Q 007633 499 AWTAILVYLD--NAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 499 g~~~irf~ad--NPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
....|.|.++ .||.|-|+|-+--|+. ||-..+.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999988 8999999999887877 898888875
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=94.22 E-value=0.08 Score=45.46 Aligned_cols=72 Identities=8% Similarity=0.067 Sum_probs=45.0
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
..+.++.|+.|.|+.. +. .|.++++. +.+. .....+ .+.+|....+.| +.||.
T Consensus 21 ~~i~V~~GdtV~f~n~--d~-~H~v~~~~----------~~~p-~~~~~~-----------~~~~g~t~~~tF--~~~G~ 73 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPT--DK-GHNVETIK----------GMIP-DGAEAF-----------KSKINENYKVTF--TAPGV 73 (122)
T ss_dssp SEEEECTTEEEEEEES--SS-SCCCEECT----------TCSC-TTCCCC-----------BCCTTCCEEEEE--CSCEE
T ss_pred CEEEECCCCEEEEEEC--CC-CcEEEEcc----------cccC-CCccee-----------ecCCCCEEEEEe--CCCEE
Confidence 3567889999988744 33 56666653 1111 100011 224666555544 89999
Q ss_pred eEEeeccccceeccceEEEEEec
Q 007633 513 WNLRAENLDTWYLGQEVYVNVIN 535 (595)
Q Consensus 513 W~~HCHil~H~~~GM~~~~~V~~ 535 (595)
|.|+|-+ |.. |...+.|.+
T Consensus 74 y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 74 YGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEEETT--EEE--EEEEEEESS
T ss_pred EEEEeCC--Ccc--CEEEEEEeC
Confidence 9999988 555 888888875
No 133
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.21 E-value=0.17 Score=45.90 Aligned_cols=72 Identities=11% Similarity=0.171 Sum_probs=55.8
Q ss_pred EecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcceeE
Q 007633 435 INGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIWN 514 (595)
Q Consensus 435 ~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W~ 514 (595)
+.++.|+.|++.+.|. +..|.|.+=.... -+.+.||....+.|.++.||.+.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi---------------------------k~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTNI---------------------------NVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSSC---------------------------EEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCCe---------------------------EEEecCCceeEEEEEeCCCEEEE
Confidence 4678999999999997 5667775532211 13567888888999999999999
Q ss_pred Eeecc-ccceeccceEEEEEe
Q 007633 515 LRAEN-LDTWYLGQEVYVNVI 534 (595)
Q Consensus 515 ~HCHi-l~H~~~GM~~~~~V~ 534 (595)
+.|.. --+-|.+|...+.|.
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99985 445678999988886
No 134
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=93.94 E-value=0.19 Score=43.59 Aligned_cols=92 Identities=8% Similarity=0.013 Sum_probs=60.6
Q ss_pred eEEecCCC-cEEEEEEEcCCCc-----cceeeecCceEEEEEEeCCccCC--------CCCCCCCC-CC-CCcccEEEeC
Q 007633 433 SLINGTYK-GFMEIIFQNNDTT-----VQSYHMDGYAFFVVGMDFGVWTE--------NSRGTYNK-WD-GVARSTTQVF 496 (595)
Q Consensus 433 ~v~~~~~g-~~ve~vi~N~~~~-----~HP~HlHG~~F~Vl~~g~G~~~~--------~~~~~~n~-~~-p~~rDTv~v~ 496 (595)
..++++.| +.|.+++.|.+.. .|-|-+ ...+ .... .....|-. .+ .....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi-------~~~~--~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVL-------AKSA--DVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEE-------EEGG--GHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEE-------ecCc--chhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 45788999 9999999999764 365543 2211 0000 00000100 01 1223455688
Q ss_pred CCcEEEEEEEec---CcceeEEeeccccceeccceEEEEEe
Q 007633 497 PGAWTAILVYLD---NAGIWNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 497 p~g~~~irf~ad---NPG~W~~HCHil~H~~~GM~~~~~V~ 534 (595)
||....+.|.++ .||.+-|.|-+--|+. ||-..+.|.
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 999999999997 8999999999877877 888888875
No 135
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=91.30 E-value=0.81 Score=39.49 Aligned_cols=92 Identities=11% Similarity=-0.011 Sum_probs=59.2
Q ss_pred eEEec-CCCcEEEEEEEcCCCcc-----ceeeecCceEEEEEEeCCccCCC--------CCCCCCC-CCC-CcccEEEeC
Q 007633 433 SLING-TYKGFMEIIFQNNDTTV-----QSYHMDGYAFFVVGMDFGVWTEN--------SRGTYNK-WDG-VARSTTQVF 496 (595)
Q Consensus 433 ~v~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~G~~~~~--------~~~~~n~-~~p-~~rDTv~v~ 496 (595)
.-+++ +.|+.|.+++.|.+... |-|-|- ..+ ..... ....|-. .++ ....+..|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~ 88 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLT-------KDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIG 88 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEE-------EGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEc-------Ccc--chhhhHHHhhhhcccccccccccccceeeeeEEC
Confidence 35678 78999999999998653 655432 111 00000 0000100 111 122445678
Q ss_pred CCcEEEEEEEec--Ccce-eEEeeccccceeccceEEEEEe
Q 007633 497 PGAWTAILVYLD--NAGI-WNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 497 p~g~~~irf~ad--NPG~-W~~HCHil~H~~~GM~~~~~V~ 534 (595)
||+...+.|.++ .||. +-|.|-+--|+. ||-..+.|.
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 89 GGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 999999999998 7876 999999877877 898888875
No 136
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=91.27 E-value=0.71 Score=39.80 Aligned_cols=92 Identities=10% Similarity=0.017 Sum_probs=59.6
Q ss_pred eEEec-CCCcEEEEEEEcCCCcc-----ceeeecCceEEEEEEeCCccCCC--------CCCCC-CCCCC-CcccEEEeC
Q 007633 433 SLING-TYKGFMEIIFQNNDTTV-----QSYHMDGYAFFVVGMDFGVWTEN--------SRGTY-NKWDG-VARSTTQVF 496 (595)
Q Consensus 433 ~v~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~F~Vl~~g~G~~~~~--------~~~~~-n~~~p-~~rDTv~v~ 496 (595)
.-+++ +.|+.|.+++.|.+... |-|-|- .. +..... ....| .-.++ ...++..|.
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~--------~~-~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 87 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVS--------KK-SDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIG 87 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEE--------ET-THHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEc--------cc-cchhhHHHhhhhccccccccccccchhhccceeeC
Confidence 34678 78999999999998653 665432 11 100000 00001 00111 123455689
Q ss_pred CCcEEEEEEEec--Ccce-eEEeeccccceeccceEEEEEe
Q 007633 497 PGAWTAILVYLD--NAGI-WNLRAENLDTWYLGQEVYVNVI 534 (595)
Q Consensus 497 p~g~~~irf~ad--NPG~-W~~HCHil~H~~~GM~~~~~V~ 534 (595)
||+...+.|.+. .||. +-|.|-+--|+. ||-..+.|.
T Consensus 88 pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 88 GGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 999999999998 8995 999999887877 898888875
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=90.76 E-value=0.84 Score=39.35 Aligned_cols=98 Identities=11% Similarity=0.032 Sum_probs=58.8
Q ss_pred eEEec-CCCcEEEEEEEcCCCcc-----ceeeecCce-EEEEEEeCCccCCCCCCCC-CCCCC-CcccEEEeCCCcEEEE
Q 007633 433 SLING-TYKGFMEIIFQNNDTTV-----QSYHMDGYA-FFVVGMDFGVWTENSRGTY-NKWDG-VARSTTQVFPGAWTAI 503 (595)
Q Consensus 433 ~v~~~-~~g~~ve~vi~N~~~~~-----HP~HlHG~~-F~Vl~~g~G~~~~~~~~~~-n~~~p-~~rDTv~v~p~g~~~i 503 (595)
.-+++ +.|+.|.+++.|.+... |-|-+-... +.-++. .+ ........| .-.++ ....|-.|.||+...+
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~-~~-m~~~~~~~~~~~~~~~~~~~t~~l~pGet~sv 95 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIAT-DG-LSAGIDKQYLKDGDARVIAHTKVIGAGEKDSV 95 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHH-HH-TTTCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHH-HH-hhccccccccccccchhheeeeeeCCCCEEEE
Confidence 45688 79999999999997653 665442110 000000 00 000000001 00111 1233446899999999
Q ss_pred EEEec--Ccce-eEEeeccccceeccceEEEEE
Q 007633 504 LVYLD--NAGI-WNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 504 rf~ad--NPG~-W~~HCHil~H~~~GM~~~~~V 533 (595)
.|.+. .||. +-|.|-+--|+. ||-..+.|
T Consensus 96 tf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 96 TFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 99998 7887 999999887877 88887776
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=88.55 E-value=1.1 Score=38.37 Aligned_cols=93 Identities=8% Similarity=0.018 Sum_probs=58.0
Q ss_pred eEEecCC-CcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCC-------CC-CCCC-CC-CCCCcccEEEeCCCcEE
Q 007633 433 SLINGTY-KGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTE-------NS-RGTY-NK-WDGVARSTTQVFPGAWT 501 (595)
Q Consensus 433 ~v~~~~~-g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~-------~~-~~~~-n~-~~p~~rDTv~v~p~g~~ 501 (595)
.-+.++. |+.|.++|.|.+... --.=||.| ||+.. +.... .. ...| +- +..+...|..|.||...
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~-Vl~~~-~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLP--KNVMGHNW-VLSTA-ADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCC--HHHHCBCC-EEEEH-HHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred CEEEEecCCCEEEEEEEECCccc--ccccCceE-EEccc-chHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 4567875 999999999998652 00012333 44431 11100 00 0112 11 22345567789999999
Q ss_pred EEEEEec---CcceeEEeeccccceeccceEEEEE
Q 007633 502 AILVYLD---NAGIWNLRAENLDTWYLGQEVYVNV 533 (595)
Q Consensus 502 ~irf~ad---NPG~W~~HCHil~H~~~GM~~~~~V 533 (595)
.|.|.+. .||.|-|-|- -|+ ||-..+.|
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 9999997 8999999999 688 89888876
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=76.71 E-value=18 Score=30.55 Aligned_cols=72 Identities=14% Similarity=0.328 Sum_probs=51.1
Q ss_pred cCcEE--EEEEEEeCCCceeeEEEe-CCceeEE--eecCccee--------eeeeeEEEEeccceEEEEEEeCC--CCCc
Q 007633 224 PGKTY--RLRVHNVGISTSLNFRIQ-NHNLLLV--ETEGSYTV--------QQNYTNMDIHVGQSFSFLVTTDQ--NASS 288 (595)
Q Consensus 224 ~G~~~--rlRliNag~~~~~~~~i~-gh~~~vi--a~DG~~~~--------p~~~d~l~i~pGqR~dvlv~~~~--~~g~ 288 (595)
.|+.+ .|.+.|.+.. ...+.+. |+.+.++ ..+|..+- .+......|.|||...+-.+.++ .||
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG- 93 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPG- 93 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSE-
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCc-
Confidence 55554 6788888885 6667774 5654444 44576553 23567899999999999999985 367
Q ss_pred ceEEEEeec
Q 007633 289 DYYIVASPR 297 (595)
Q Consensus 289 ~y~i~a~~~ 297 (595)
.|.+++...
T Consensus 94 ~Ytl~a~l~ 102 (120)
T 3isy_A 94 TYEVKVTFK 102 (120)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEEE
Confidence 999988654
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=75.72 E-value=6.3 Score=36.61 Aligned_cols=77 Identities=9% Similarity=0.054 Sum_probs=56.1
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.+.++.|+.|.+.+.+. +..|.|-+=.... -+.+-||-...+.|.++.||.
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF~IP~lgv---------------------------K~daiPGr~n~l~~~~~~pG~ 92 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSFFIPRLGS---------------------------QIYAMAGMQTRLHLIANEPGT 92 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEEEEGGGTE---------------------------EEEECTTCCEEEEECCSSSEE
T ss_pred ceEEEeCCCEEEEEEecC-CceeeEEecccCc---------------------------EEEecCCceEEEEEEeCCCeE
Confidence 346788999999999987 4456655432221 134567888889999999999
Q ss_pred eEEeeccccc-eeccceEEEEEe-cCC
Q 007633 513 WNLRAENLDT-WYLGQEVYVNVI-NPE 537 (595)
Q Consensus 513 W~~HCHil~H-~~~GM~~~~~V~-~~~ 537 (595)
+...|-..-. -|..|-..++|+ +++
T Consensus 93 y~g~CsE~CG~~Hs~M~~~v~vv~~~~ 119 (205)
T 1cyx_A 93 YDGICAEICGPGHSGMKFKAIATPDRA 119 (205)
T ss_dssp EEEEECSCCSTTSTTCCEEEEEESSHH
T ss_pred EEEEcccccccchhhceEEEEEECCHH
Confidence 9999986443 467788888888 554
No 141
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=74.49 E-value=6.7 Score=38.76 Aligned_cols=78 Identities=10% Similarity=0.167 Sum_probs=59.0
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.+.++.|+.|++.+.+. +..|.|.+-.... -+.+-||....+.|.++.||.
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~lg~---------------------------k~daiPG~~n~~~~~~~~~G~ 240 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAFAV---------------------------KQDAVPGRIAQLWFSVDQEGV 240 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGGTE---------------------------EEEECTTCCEEEEEECSSSEE
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEcccCc---------------------------eEEecCCceEEEEEEeCCCEE
Confidence 346788999999999986 4567776633222 134567888889999999999
Q ss_pred eEEeecccc-ceeccceEEEEEecCCC
Q 007633 513 WNLRAENLD-TWYLGQEVYVNVINPEI 538 (595)
Q Consensus 513 W~~HCHil~-H~~~GM~~~~~V~~~~~ 538 (595)
+...|...- .-|..|-..++|++++.
T Consensus 241 y~g~CsE~CG~~Hs~M~~~v~vvs~~~ 267 (298)
T 3hb3_B 241 YFGQCSELCGINHAYMPIVVKAVSQEK 267 (298)
T ss_dssp EEECCCSCCSTTTTSCCEEEEEECHHH
T ss_pred EEEEcccccCcCccCCeeEEEEEcHHH
Confidence 999999543 45778888899987763
No 142
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=69.51 E-value=9.5 Score=35.39 Aligned_cols=74 Identities=11% Similarity=-0.044 Sum_probs=52.9
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc-chhhhc
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL-DFQRAA 140 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 140 (595)
..|.+..|+.|++.+++. +.-+++..-.+. .+.-+-||..-...|.+ +++|+|+..|.. -.-.-.
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF~IP~lg------------vK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~Hs 106 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSFFIPRLG------------SQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGHS 106 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEEEEGGGT------------EEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTST
T ss_pred ceEEEeCCCEEEEEEecC-CceeeEEecccC------------cEEEecCCceEEEEEEe-CCCeEEEEEcccccccchh
Confidence 378999999999999986 444443333221 12345689998999988 689999999983 222334
Q ss_pred CceeeEEEe
Q 007633 141 GGYGGIIIN 149 (595)
Q Consensus 141 Gl~G~liV~ 149 (595)
.|.+.++|.
T Consensus 107 ~M~~~v~vv 115 (205)
T 1cyx_A 107 GMKFKAIAT 115 (205)
T ss_dssp TCCEEEEEE
T ss_pred hceEEEEEE
Confidence 688888888
No 143
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=68.51 E-value=10 Score=36.66 Aligned_cols=77 Identities=12% Similarity=0.172 Sum_probs=56.6
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.+.++.|+.|++.+.+. +..|.|-+=..... +.+-||....+.|.++.||.
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~~k---------------------------~da~PG~~n~~~~~~~~~G~ 222 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFGVK---------------------------QDAVPGRLAQLWFRAEREGI 222 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGTEE---------------------------EEECBTCCEEEEEECCSCEE
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccCce---------------------------EEecCCceeEEEEecCCcEE
Confidence 346789999999999987 44576655332221 24456777888999999999
Q ss_pred eEEeecccc-ceeccceEEEEEecCC
Q 007633 513 WNLRAENLD-TWYLGQEVYVNVINPE 537 (595)
Q Consensus 513 W~~HCHil~-H~~~GM~~~~~V~~~~ 537 (595)
+...|-..- --|..|-..++|++++
T Consensus 223 y~g~Cse~CG~~H~~M~~~v~vv~~~ 248 (262)
T 2gsm_B 223 FFGQCSELCGISHAYMPITVKVVSEE 248 (262)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEChHhcccCcccCeEEEEEEcHH
Confidence 999998544 3467788888888765
No 144
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=66.31 E-value=58 Score=27.33 Aligned_cols=74 Identities=11% Similarity=0.061 Sum_probs=48.8
Q ss_pred eEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCC----CccCCCCeEEEEEEECC-
Q 007633 49 KQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTN----CPIPAGWNWTYQFQVKD- 123 (595)
Q Consensus 49 ~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq----~~I~PG~~~~Y~f~~~~- 123 (595)
...+-..|-.-=.=+++...|.+..+.|.+.-.+ ..| -|+||-..+| ..|+||++.+|+...++
T Consensus 21 ~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~ 89 (120)
T 3isy_A 21 KFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEV 89 (120)
T ss_dssp EEEEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSC
T ss_pred EEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCC
Confidence 3344444554434477778888888888775221 111 3688876555 44999999999999973
Q ss_pred -ceeeeEEccC
Q 007633 124 -QIGSFFYFPS 133 (595)
Q Consensus 124 -~~Gt~wYH~H 133 (595)
.+|+|..+.-
T Consensus 90 ~~pG~Ytl~a~ 100 (120)
T 3isy_A 90 PEPGTYEVKVT 100 (120)
T ss_dssp CCSEEEEEEEE
T ss_pred CCCccEEEEEE
Confidence 4899977643
No 145
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=63.51 E-value=21 Score=35.83 Aligned_cols=70 Identities=17% Similarity=0.296 Sum_probs=44.5
Q ss_pred eeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCce---eeeCCccC-------CCCCCCC------CCCC-CCCccC
Q 007633 48 DKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLL---LTWNGVQH-------RKNSWQD------GVLG-TNCPIP 110 (595)
Q Consensus 48 ~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~---iH~HG~~~-------~~~~~~D------Gv~~-tq~~I~ 110 (595)
+..++...|=+.||-++++ .++|+|+.+++.. +..-|++. -.+.+.| |... .+.||+
T Consensus 250 V~~~v~~A~Y~vpgR~l~~------~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~ 323 (382)
T 1yew_A 250 VSVKVEDATYRVPGRAMRM------KLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLA 323 (382)
T ss_dssp EEEEEEEEEEESSCSEEEE------EEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBC
T ss_pred eEEEeeccEEecCCcEEEE------EEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcC
Confidence 4456666666788888864 5889999887653 23333332 1112222 3333 458899
Q ss_pred CCCeEEEEEEECC
Q 007633 111 AGWNWTYQFQVKD 123 (595)
Q Consensus 111 PG~~~~Y~f~~~~ 123 (595)
|||+.+.+..+.|
T Consensus 324 PGETr~~~v~a~d 336 (382)
T 1yew_A 324 PGETRTVDVTASD 336 (382)
T ss_dssp TTCEEEEEEEEEC
T ss_pred CCceeEEEEEeeh
Confidence 9999999998854
No 146
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=57.80 E-value=17 Score=34.37 Aligned_cols=77 Identities=6% Similarity=0.126 Sum_probs=55.4
Q ss_pred eEEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCcce
Q 007633 433 SLINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGI 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~ 512 (595)
+.+.++.|+.|++.+.+. +-.|.|-+=..... +..-||....+.|.++.||.
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~K---------------------------~DaiPGr~n~~~~~~~~~G~ 191 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGLK---------------------------TDAIPGRLNQTTLMSSRPGL 191 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGTEE---------------------------EEECTTCCEEEEECCSSCEE
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccCcE---------------------------EEecCCceEEEEEecCCcEE
Confidence 446788999999999986 44576655332221 23456777888999999999
Q ss_pred eEEeeccccc-eeccceEEEEEecCC
Q 007633 513 WNLRAENLDT-WYLGQEVYVNVINPE 537 (595)
Q Consensus 513 W~~HCHil~H-~~~GM~~~~~V~~~~ 537 (595)
+...|...-. -|.-|-..++|++++
T Consensus 192 y~g~Cse~CG~~Hs~M~~~v~vv~~~ 217 (227)
T 1v54_B 192 YYGQCSEICGSNHSFMPIVLELVPLK 217 (227)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEehhhcccccccCeEEEEEEcHH
Confidence 9999986443 366777788888665
No 147
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=57.23 E-value=22 Score=34.41 Aligned_cols=76 Identities=20% Similarity=-0.004 Sum_probs=52.8
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc-chhhhc
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL-DFQRAA 140 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 140 (595)
..+.+..|+.|++.+++. +.-++...-.+.. +.-+-||..-...|.+ +++|+|+..|.. -.--.+
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~~------------k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H~ 236 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFGV------------KQDAVPGRLAQLWFRA-EREGIFFGQCSELCGISHA 236 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGTE------------EEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTGG
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccCc------------eEEecCCceeEEEEec-CCcEEEEEEChHhcccCcc
Confidence 469999999999999987 4444444333311 1235678888888988 689999999983 122223
Q ss_pred CceeeEEEecc
Q 007633 141 GGYGGIIINNR 151 (595)
Q Consensus 141 Gl~G~liV~~~ 151 (595)
.|.+.+.|.++
T Consensus 237 ~M~~~v~vv~~ 247 (262)
T 2gsm_B 237 YMPITVKVVSE 247 (262)
T ss_dssp GCCEEEEEECH
T ss_pred cCeEEEEEEcH
Confidence 57788877764
No 148
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=57.08 E-value=41 Score=34.08 Aligned_cols=69 Identities=23% Similarity=0.319 Sum_probs=43.4
Q ss_pred eeEEEEEEcCCCCCCeEEeecCCEEEEEEEECCCCCce---eeeCCccCCC-------CCCCC------CCCCCCCccCC
Q 007633 48 DKQQVIGINGQFPGPILNVTTNWNVVVNVKNDLDEPLL---LTWNGVQHRK-------NSWQD------GVLGTNCPIPA 111 (595)
Q Consensus 48 ~~~~~~~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~~~~~---iH~HG~~~~~-------~~~~D------Gv~~tq~~I~P 111 (595)
+..++...|=+.||-++++ .++|+|+.+++.. +..-|+++.. +.+.| |.. +..||+|
T Consensus 284 V~~~v~~A~Y~vpgR~l~~------~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~pI~P 356 (419)
T 3rfr_A 284 VTTELNGGVYKVPGRELTI------NVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDDVIAP 356 (419)
T ss_dssp CEEEEEEEEEESSSSEEEE------EEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCCCBCT
T ss_pred eEEEEeceEEecCCcEEEE------EEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCCCcCC
Confidence 4455555666778888854 5888999887653 2333333321 11222 433 4449999
Q ss_pred CCeEEEEEEECC
Q 007633 112 GWNWTYQFQVKD 123 (595)
Q Consensus 112 G~~~~Y~f~~~~ 123 (595)
||+.+.+..+.|
T Consensus 357 GETrt~~V~a~d 368 (419)
T 3rfr_A 357 GESKEIVVKIQD 368 (419)
T ss_dssp TCEEEEEEEEEC
T ss_pred CcceEEEEEeeh
Confidence 999999998854
No 149
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=55.87 E-value=25 Score=34.57 Aligned_cols=77 Identities=19% Similarity=-0.020 Sum_probs=53.7
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc-chhhhc
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL-DFQRAA 140 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 140 (595)
..+.+..|+.|++.+++. +.-|++..-.+.. +.-+-||..-...|.+ +++|+|+..|.. -.....
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~lg~------------k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~Hs 254 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAFAV------------KQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINHA 254 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGGTE------------EEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTTT
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEcccCc------------eEEecCCceEEEEEEe-CCCEEEEEEcccccCcCcc
Confidence 579999999999999995 3444433322211 1234678888889998 689999999983 233334
Q ss_pred CceeeEEEeccC
Q 007633 141 GGYGGIIINNRD 152 (595)
Q Consensus 141 Gl~G~liV~~~~ 152 (595)
.|.+.+.|.+++
T Consensus 255 ~M~~~v~vvs~~ 266 (298)
T 3hb3_B 255 YMPIVVKAVSQE 266 (298)
T ss_dssp SCCEEEEEECHH
T ss_pred CCeeEEEEEcHH
Confidence 688888887653
No 150
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=50.50 E-value=45 Score=27.63 Aligned_cols=47 Identities=15% Similarity=0.321 Sum_probs=31.6
Q ss_pred cEEEEEEEEeCCCc-eeeEEEeCC-ceeEEeecCcceeeeeeeEEEEeccceEEEEEEe
Q 007633 226 KTYRLRVHNVGIST-SLNFRIQNH-NLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTT 282 (595)
Q Consensus 226 ~~~rlRliNag~~~-~~~~~i~gh-~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~ 282 (595)
-.|+|+|+|.+... .+.|++.|. .+.+++ + ..+.+.|||..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 35999999999854 566777764 233322 1 13899999987766654
No 151
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=49.98 E-value=18 Score=35.98 Aligned_cols=76 Identities=9% Similarity=0.087 Sum_probs=54.8
Q ss_pred EEecCCCcEEEEEEEcCCCccceeeecCceEEEEEEeCCccCCCCCCCCCCCCCCcccEEEeCCCcEEEEEEEecCccee
Q 007633 434 LINGTYKGFMEIIFQNNDTTVQSYHMDGYAFFVVGMDFGVWTENSRGTYNKWDGVARSTTQVFPGAWTAILVYLDNAGIW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vi~N~~~~~HP~HlHG~~F~Vl~~g~G~~~~~~~~~~n~~~p~~rDTv~v~p~g~~~irf~adNPG~W 513 (595)
.+.++.|+.|++.+... +..|.|.+=.... -+..-||-...+.|.++.||.+
T Consensus 152 ~l~lP~g~~V~~~lTS~-DViHsf~IP~lg~---------------------------k~DaiPGr~n~~~~~~~~~G~y 203 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSN-SVMNSFFIPRLGS---------------------------QIYAMAGMQTRLHLIANEPGTY 203 (315)
T ss_dssp BCCCCSSSEEEEEECBS-SSCEEEEEGGGTE---------------------------EEEECBTSCEEEEEECCSCBCC
T ss_pred eEEEeCCCEEEEEEEeC-CccceeeecccCc---------------------------EEeecCCcceeeEEecCCCeEE
Confidence 45678899999999977 4457665532222 1245577788899999999999
Q ss_pred EEeeccccc-eeccceEEEEEe-cCC
Q 007633 514 NLRAENLDT-WYLGQEVYVNVI-NPE 537 (595)
Q Consensus 514 ~~HCHil~H-~~~GM~~~~~V~-~~~ 537 (595)
...|-..-. -|..|-..++|+ +++
T Consensus 204 ~g~CsE~CG~~Hs~M~~~v~vv~~~~ 229 (315)
T 1fft_B 204 DGISASYSGPGFSGMKFKAIATPDRA 229 (315)
T ss_dssp EEBCCSCCSTTTTTCCEECCBCSSTH
T ss_pred EEeccccchhhHHhccceEEEecCHH
Confidence 999985443 366777788888 555
No 152
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=46.10 E-value=19 Score=30.12 Aligned_cols=35 Identities=11% Similarity=0.243 Sum_probs=28.9
Q ss_pred EEEEECCceeeeEEccCcchhhhcCceeeE-EEeccC
Q 007633 117 YQFQVKDQIGSFFYFPSLDFQRAAGGYGGI-IINNRD 152 (595)
Q Consensus 117 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l-iV~~~~ 152 (595)
..+++ +.+|++||-|-...|=..||...| .|....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 46777 579999999999988889999999 887654
No 153
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=41.26 E-value=33 Score=29.09 Aligned_cols=69 Identities=9% Similarity=0.132 Sum_probs=38.0
Q ss_pred EEcCCCCCCeEEeecCCEEEEEEEECCC---CCc--eee--eCCccCCC-CCCCCCCCCCCCccCCCCeEEEEEEEC
Q 007633 54 GINGQFPGPILNVTTNWNVVVNVKNDLD---EPL--LLT--WNGVQHRK-NSWQDGVLGTNCPIPAGWNWTYQFQVK 122 (595)
Q Consensus 54 ~~Ng~~PgP~I~v~~Gd~v~v~v~N~l~---~~~--~iH--~HG~~~~~-~~~~DGv~~tq~~I~PG~~~~Y~f~~~ 122 (595)
.++|--+.+.=.+..|..+.+.+.=..+ ... .+| ..|+...- ....|+=.++.|||.+|+.++|.+..+
T Consensus 17 ~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 17 MVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp EETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred EECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 4444313445567788887777762222 111 222 24444321 112333323679999999999997764
No 154
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=39.86 E-value=33 Score=29.10 Aligned_cols=69 Identities=19% Similarity=0.265 Sum_probs=39.0
Q ss_pred EEEcCCCCCCeEEeecCCEEEEEEE---ECCCCCceeee----CCccCC-CCCCCCCCC-CCCCccCCCCeEEEEEEEC
Q 007633 53 IGINGQFPGPILNVTTNWNVVVNVK---NDLDEPLLLTW----NGVQHR-KNSWQDGVL-GTNCPIPAGWNWTYQFQVK 122 (595)
Q Consensus 53 ~~~Ng~~PgP~I~v~~Gd~v~v~v~---N~l~~~~~iH~----HG~~~~-~~~~~DGv~-~tq~~I~PG~~~~Y~f~~~ 122 (595)
..++|= +.+.=.+.+|..+.+.+. |.-........ .|+... ..+..|+=. ++.|||.+|+.++|.+..+
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 345553 245556778888777776 22112222222 344332 112234443 3679999999999998875
No 155
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=38.56 E-value=51 Score=31.00 Aligned_cols=76 Identities=8% Similarity=-0.115 Sum_probs=51.8
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc--chhh
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL--DFQR 138 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~--~~q~ 138 (595)
...+.+..|..|++.++.. +.-|+...-.+.. .+| .-||..-...|++ +++|+|+..|.. +..-
T Consensus 139 dn~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~----K~D--------aiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGL----KTD--------AIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SSCEEEETTSCEEEEEEES-SSCEEEEEGGGTE----EEE--------ECTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred CceEEEecCCEEEEEEEeC-cccceeeecccCc----EEE--------ecCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 3679999999999999985 4444444333321 133 4578888888888 689999999983 3222
Q ss_pred hcCceeeEEEecc
Q 007633 139 AAGGYGGIIINNR 151 (595)
Q Consensus 139 ~~Gl~G~liV~~~ 151 (595)
+-|.+.+.|.++
T Consensus 205 -s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 -SFMPIVLELVPL 216 (227)
T ss_dssp -GGCCEEEEEECH
T ss_pred -ccCeEEEEEEcH
Confidence 246777777654
No 156
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=34.03 E-value=31 Score=29.32 Aligned_cols=48 Identities=17% Similarity=0.237 Sum_probs=28.3
Q ss_pred EEEEEECCCCCc---eeeeCCccCCCC---CCCCCCCCCCCccCCCCeEEEEEE
Q 007633 73 VVNVKNDLDEPL---LLTWNGVQHRKN---SWQDGVLGTNCPIPAGWNWTYQFQ 120 (595)
Q Consensus 73 ~v~v~N~l~~~~---~iH~HG~~~~~~---~~~DGv~~tq~~I~PG~~~~Y~f~ 120 (595)
.|++.|..+.+. +=||.=..-.+. -.-+||-|.|--|.||++|+|.=-
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg 87 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTSG 87 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeCC
Confidence 466677766554 346653321111 123677677777999998888643
No 157
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=32.94 E-value=2e+02 Score=24.32 Aligned_cols=65 Identities=18% Similarity=0.207 Sum_probs=38.2
Q ss_pred CCeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCC--------CCCCCccCCCCeEEEEEEECCceeee
Q 007633 61 GPILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGV--------LGTNCPIPAGWNWTYQFQVKDQIGSF 128 (595)
Q Consensus 61 gP~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv--------~~tq~~I~PG~~~~Y~f~~~~~~Gt~ 128 (595)
|-+|.++.||++.|.|.-+-...++-..... .+..-.|++ |.....+..|+...+.|++. ++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~--~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A~-~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGG--TKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTVK-AAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTT--BSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEEC-SSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecC--CCccccccceeecceeeeCCCCCcCCCcEEEEEEEEc-cCceE
Confidence 5699999999999999977544333332221 111112222 11112345668888899984 67754
No 158
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=30.84 E-value=32 Score=29.22 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=28.4
Q ss_pred EEEEEECCCCCc---eeeeCCccCCCC---CCCCCCCCCCCccCCCCeEEEEEEE
Q 007633 73 VVNVKNDLDEPL---LLTWNGVQHRKN---SWQDGVLGTNCPIPAGWNWTYQFQV 121 (595)
Q Consensus 73 ~v~v~N~l~~~~---~iH~HG~~~~~~---~~~DGv~~tq~~I~PG~~~~Y~f~~ 121 (595)
.|++.|..+.+. +=||.=..-.+. -.-+||-|.|--|.||++|+|.=-.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGT 87 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCCc
Confidence 466667766553 336653221110 1235776677779999988886433
No 159
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=29.24 E-value=44 Score=28.85 Aligned_cols=49 Identities=18% Similarity=0.254 Sum_probs=28.5
Q ss_pred EEEEEECCCCCc---eeeeCCccCCCC---CCCCCCCCCCCccCCCCeEEEEEEE
Q 007633 73 VVNVKNDLDEPL---LLTWNGVQHRKN---SWQDGVLGTNCPIPAGWNWTYQFQV 121 (595)
Q Consensus 73 ~v~v~N~l~~~~---~iH~HG~~~~~~---~~~DGv~~tq~~I~PG~~~~Y~f~~ 121 (595)
.|++.|..+.+. +=||.=..-.+. -.-+||-|.|--|.||++|+|.=-.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg~ 92 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSGC 92 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCCc
Confidence 466677766543 336653221111 1235776777779999988886533
No 160
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=28.56 E-value=59 Score=26.72 Aligned_cols=37 Identities=11% Similarity=0.212 Sum_probs=0.0
Q ss_pred EEEEEECCceeeeEEccCcchhhhcCceeeEEEeccCC
Q 007633 116 TYQFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 116 ~Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 153 (595)
...+++ +.+|++||-|-...|=..||...|.|.....
T Consensus 71 ~~~v~L-~~~G~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 71 ADSIPL-KRPGTFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp EEEEEC-CSSEEEEEECCSTTTTTTTCEEEEEECC---
T ss_pred CEEEEE-CCCcCEEEECCCCCcccCCCEEEEEEcCCCC
No 161
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=27.62 E-value=47 Score=26.51 Aligned_cols=68 Identities=16% Similarity=0.206 Sum_probs=37.1
Q ss_pred EecCcEEEEEEEEeCCCceeeEEEeCC--ceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCCC--CCcceEEEEee
Q 007633 222 VEPGKTYRLRVHNVGISTSLNFRIQNH--NLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQN--ASSDYYIVASP 296 (595)
Q Consensus 222 v~~G~~~rlRliNag~~~~~~~~i~gh--~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~~--~g~~y~i~a~~ 296 (595)
-+||+++++|++-.... .... .+- .+++...+|..+.... ........++.-+.++.. .| .|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~-~~p~--~~~~~~v~l~dp~g~~v~~~~---~~~~~~G~~~~~f~Lp~~~~~G-~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDEN-FHPL--NELIPLVYIQDPKGNRIAQWQ---SFQLEGGLKQFSFPLSSEPFQG-SYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGG-GCBC--CCEEEEEEEECTTSCEEEEEE---EEECBTTEEEEEEECCSSCCCE-EEEEEEEC
T ss_pred cCCCCEEEEEEEEECCC-CcCC--CCCceEEEEECCCCCEEEEEE---eecCCCCEEEEEEECCCCCCCe-eEEEEEEE
Confidence 47999999998865432 1111 111 3445555666543211 111234456666666543 36 89998865
No 162
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=24.72 E-value=39 Score=28.96 Aligned_cols=49 Identities=16% Similarity=0.234 Sum_probs=28.1
Q ss_pred EEEEEECCCCCc---eeeeCCccCCCC---CCCCCCCCCCCccCCCCeEEEEEEE
Q 007633 73 VVNVKNDLDEPL---LLTWNGVQHRKN---SWQDGVLGTNCPIPAGWNWTYQFQV 121 (595)
Q Consensus 73 ~v~v~N~l~~~~---~iH~HG~~~~~~---~~~DGv~~tq~~I~PG~~~~Y~f~~ 121 (595)
.|++.|..+.+. +=||-=..-.+. -.-+||-|.|--|.||++|+|.=-.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg~ 87 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGT 87 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCCc
Confidence 466677766543 335543221110 1235776777779999988886533
No 163
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=24.48 E-value=3.1e+02 Score=22.93 Aligned_cols=67 Identities=13% Similarity=0.078 Sum_probs=44.0
Q ss_pred EEecCcEE--EEEEEEeCCCceeeEEEeCCceeEEeecCcceeeeeeeEEEEeccceEEEEEEeCC-CCCcceEEEEeec
Q 007633 221 NVEPGKTY--RLRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSFSFLVTTDQ-NASSDYYIVASPR 297 (595)
Q Consensus 221 ~v~~G~~~--rlRliNag~~~~~~~~i~gh~~~via~DG~~~~p~~~d~l~i~pGqR~dvlv~~~~-~~g~~y~i~a~~~ 297 (595)
.+.+|+.+ +..+-|.|....-.+.+ .+ -.||..+.-. .+.|.+|+.-.|.+.... .+| .|.+.+...
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~l-yvng~~v~t~---~v~La~G~s~tv~f~~~~~~~G-~~~v~AvVD 97 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RV-YINGTLYKNW---TVSLGPKEEKVLTFNWTPTQEG-MYRINATVD 97 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EE-EETTEEEEEE---EEEECTTCEEEEEEEECCSSCE-EEEEEEEES
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EE-EECCEEEeeE---EeccCCCCeEEEEEEEEcCCCc-EEEEEEEEc
Confidence 56778776 67788999875433332 22 2366655322 456999999888887653 345 888887654
No 164
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=23.74 E-value=39 Score=27.22 Aligned_cols=24 Identities=13% Similarity=-0.033 Sum_probs=21.4
Q ss_pred EEEEEcCCCCCCeEEeecCCEEEE
Q 007633 51 QVIGINGQFPGPILNVTTNWNVVV 74 (595)
Q Consensus 51 ~~~~~Ng~~PgP~I~v~~Gd~v~v 74 (595)
...++||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 468999998778889999999987
No 165
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=22.62 E-value=1e+02 Score=26.47 Aligned_cols=36 Identities=11% Similarity=0.211 Sum_probs=29.3
Q ss_pred EEEECCceeeeEEccCcchhhhcCceeeEEEeccCC
Q 007633 118 QFQVKDQIGSFFYFPSLDFQRAAGGYGGIIINNRDV 153 (595)
Q Consensus 118 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 153 (595)
.|++.+.+|++||-|-...|=..||...|.|.....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 566623699999999999998999999999986543
No 166
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=22.09 E-value=95 Score=26.67 Aligned_cols=35 Identities=17% Similarity=0.219 Sum_probs=29.1
Q ss_pred EEEe-cCcceeEEeeccccceeccceEEEEEecCCC
Q 007633 504 LVYL-DNAGIWNLRAENLDTWYLGQEVYVNVINPEI 538 (595)
Q Consensus 504 rf~a-dNPG~W~~HCHil~H~~~GM~~~~~V~~~~~ 538 (595)
+|.. +.+|..-|=|=+..|=..||-+.++|.....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 3556 7899999999999999999999999986543
No 167
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=21.83 E-value=34 Score=29.14 Aligned_cols=21 Identities=24% Similarity=0.442 Sum_probs=17.4
Q ss_pred eeEEEecCcEEEEEEEEeCCC
Q 007633 218 QLINVEPGKTYRLRVHNVGIS 238 (595)
Q Consensus 218 ~~l~v~~G~~~rlRliNag~~ 238 (595)
-.|+|++||++||.+.|-+..
T Consensus 71 k~InV~~GETVrF~v~nkt~~ 91 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVA 91 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEE
Confidence 449999999999999995543
No 168
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=21.65 E-value=59 Score=32.22 Aligned_cols=74 Identities=11% Similarity=-0.028 Sum_probs=51.0
Q ss_pred CeEEeecCCEEEEEEEECCCCCceeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEECCceeeeEEccCc-chhhhc
Q 007633 62 PILNVTTNWNVVVNVKNDLDEPLLLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSL-DFQRAA 140 (595)
Q Consensus 62 P~I~v~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~q~~~ 140 (595)
..|.+..|..|++.++.. +.-+++..-.+.. +.-+-||..-...|++ +++|+|+..|.. -..-.+
T Consensus 151 n~l~lP~g~~V~~~lTS~-DViHsf~IP~lg~------------k~DaiPGr~n~~~~~~-~~~G~y~g~CsE~CG~~Hs 216 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN-SVMNSFFIPRLGS------------QIYAMAGMQTRLHLIA-NEPGTYDGISASYSGPGFS 216 (315)
T ss_dssp SBCCCCSSSEEEEEECBS-SSCEEEEEGGGTE------------EEEECBTSCEEEEEEC-CSCBCCEEBCCSCCSTTTT
T ss_pred ceEEEeCCCEEEEEEEeC-CccceeeecccCc------------EEeecCCcceeeEEec-CCCeEEEEeccccchhhHH
Confidence 478899999999999876 4444444333311 2335678888888988 799999999983 222233
Q ss_pred CceeeEEEe
Q 007633 141 GGYGGIIIN 149 (595)
Q Consensus 141 Gl~G~liV~ 149 (595)
.|.+.++|.
T Consensus 217 ~M~~~v~vv 225 (315)
T 1fft_B 217 GMKFKAIAT 225 (315)
T ss_dssp TCCEECCBC
T ss_pred hccceEEEe
Confidence 577777776
No 169
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=20.66 E-value=68 Score=25.98 Aligned_cols=56 Identities=18% Similarity=0.085 Sum_probs=34.6
Q ss_pred ecCCEEEEEEEECCCCCc---eeeeCCccCCCCCCCCCCCCCCCccCCCCeEEEEEEEC-Cceee
Q 007633 67 TTNWNVVVNVKNDLDEPL---LLTWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVK-DQIGS 127 (595)
Q Consensus 67 ~~Gd~v~v~v~N~l~~~~---~iH~HG~~~~~~~~~DGv~~tq~~I~PG~~~~Y~f~~~-~~~Gt 127 (595)
.+==.+.|.|+|-|+.+. .++..|.-. .++--..-..|.||++..+++... ..+|.
T Consensus 19 ~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 19 GQECEVQIVFKNPLPVTLTNVVFRLEGSGL-----QRPKILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp SSCEEEEEEEECCSSSCBCSEEEEEEETTT-----EEEEEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred CCeEEEEEEEECCCCCcccCEEEEEECCCC-----CcceEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 333467889999998654 466665421 111001124599999999998873 34664
Done!