BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007635
(595 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 252/557 (45%), Gaps = 56/557 (10%)
Query: 33 YDFKVSYITASPLGVPQQVIAINGKFPG-XXXXXXXXXXXXXXXXXXXXESLLMTWPGIQ 91
Y ++V Y+ +P V+ ING+FPG E +++ W GI
Sbjct: 6 YKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGIL 65
Query: 92 MRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNR 150
R W DG + C I + Y F V D G+FFY L +QR +G +G +I++
Sbjct: 66 QRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPP 124
Query: 151 KVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSG--KDLDMPDGVLINGKGPY----- 203
+ PF +G+I L+ DW+ ++ L S + + P +L+NG+G +
Sbjct: 125 QGKKEPFHY-DGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIA 183
Query: 204 -RYNTTLVPDGIEYET------INVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEG 256
+Y++ L P ++ +V P KTYR+R+ + +LNF I NH LL+VE +G
Sbjct: 184 AKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADG 243
Query: 257 HYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSN 316
+Y + +I+ G+SYS L+T DQN S +Y++ R + + +T + L S
Sbjct: 244 NYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSV 303
Query: 317 SKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLR 376
SK S P P+ P+ W + ++ +A+ P P F+ + V
Sbjct: 304 SKLPTSPP-PQTPA-----WDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNV-- 355
Query: 377 SLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFP------NKPLTRPPRT 430
I+G V+ +N +S P TP A KYN+ A+ + P + + PP
Sbjct: 356 ------INGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTN 409
Query: 431 DRSLI-NATYK----GFIEIILQN------NDTKMQSFHMDGYSFFVVGMDFGIWTESNR 479
+++ I N Y+ +++ILQN N ++ +H+ G+ F+V+G G ++
Sbjct: 410 EKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEE 469
Query: 480 NSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEEN 539
+S N + + T ++P WTAI DN GVW ++G M +V E
Sbjct: 470 SSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMG----MGVVFAE-- 523
Query: 540 GDTEMGP-PDNVLYCGA 555
G ++G P L CG
Sbjct: 524 GVEKVGRIPTKALACGG 540
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 129/298 (43%), Gaps = 27/298 (9%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFPGXXXXXXX-----XXXXXXXXXXXXXESLLMTWP 88
D ++ SP G +Q + +NG PG +S + W
Sbjct: 7 DLTITNAAVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGP-VI 146
G + +W DG N CPI S ++ Y FQV DQ G+F+Y L+ Q G GP V+
Sbjct: 67 GFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 147 INNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA--LRTALDSGKDLDMPDGVLINGKGPYR 204
+ +D D + + DWY H A L A G D LINGKG
Sbjct: 127 YDPNDPAADLYDVDNDDTVITLVDWY---HVAAKLGPAFPLGAD-----ATLINGKGRSP 178
Query: 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264
TT + I+V PGK YR R+ ++ + F I HN+ ++ET+ T+
Sbjct: 179 STTTA-----DLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVV 233
Query: 265 TSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAAS 322
S +I Q YSF++ +Q A +Y+I A+ F N F + AIL Y GAA+
Sbjct: 234 DSIQIFAAQRYSFVLEANQ-AVDNYWIRANPNFGNVGFTGGINS-AILRY---DGAAA 286
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 185/503 (36%), Gaps = 76/503 (15%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFP-----GXXXXXXXXXXXXXXXXXXXXESLLMTWP 88
D +S SP G +Q I +N FP G +S + W
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVII 147
G +W DG N CPI + + Y FQV DQ G+F+Y L+ Q G GP+++
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVV 126
Query: 148 -NNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYN 206
+ +D + + + DWY H A + G + D LING G R
Sbjct: 127 YDPNDPHASLYDVDDDSTVITLADWY---HLAAKV----GAPVPTADATLINGLG--RSA 177
Query: 207 TTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTS 266
TL D I V GK YR R+ ++ + F I H+L ++E + S
Sbjct: 178 ATLAAD---LAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDS 234
Query: 267 FEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLP 326
+I Q YSF++ DQ+ +Y+I A ++F T AIL Y GAA P+
Sbjct: 235 LQIFAAQRYSFVLNADQDV-DNYWIRALPNSGTQNFAGG-TNSAILRY---DGAA--PVE 287
Query: 327 EAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQG-------SFHYGSINITDTYVLRSLP 379
S + + + + T+A G+ P P G +F + N
Sbjct: 288 PTTSQTPSTNPLVESALTTLKGTAAPGS-PTPGGVDLALNMAFGFAGGNF---------- 336
Query: 380 PVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATY 439
T+NG SF P P+ L + A L + P D
Sbjct: 337 ----------TINGASFTPPTVPVLLQILSGAQSAADLLPAGSVYSLPANAD-------- 378
Query: 440 KGFIEIILQNNDTK---MQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISK-CTTEV 495
IEI L FH+ G+ F VV + ++YN + + + +
Sbjct: 379 ---IEISLPATAAAPGFPHPFHLHGHVFAVV-------RSAGSSTYNYANPVYRDVVSTG 428
Query: 496 YPGAWTAILVSLDNVGVWNLRVE 518
PG I DN G W L
Sbjct: 429 APGDNVTIRFRTDNPGPWFLHCH 451
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 185/503 (36%), Gaps = 76/503 (15%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFP-----GXXXXXXXXXXXXXXXXXXXXESLLMTWP 88
D +S SP G +Q I +N FP G +S + W
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVII 147
G +W DG N CPI + + Y FQV DQ G+F+Y L+ Q G GP+++
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVV 126
Query: 148 -NNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYN 206
+ +D + + + DWY H A + G + D LING G R
Sbjct: 127 YDPNDPHASLYDVDDDSTVITLADWY---HLAAKV----GAPVPTADATLINGLG--RSA 177
Query: 207 TTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTS 266
TL D I V GK YR R+ ++ + F I H+L ++E + S
Sbjct: 178 ATLAAD---LAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDS 234
Query: 267 FEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLP 326
+I Q YSF++ DQ+ +Y+I A ++F T AIL Y GAA P+
Sbjct: 235 LQIFAAQRYSFVLNADQDV-DNYWIRALPNSGTQNFAGG-TNSAILRY---DGAA--PVE 287
Query: 327 EAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQG-------SFHYGSINITDTYVLRSLP 379
S + + + + T+A G+ P P G +F + N
Sbjct: 288 PTTSQTPSTNPLVESALTTLKGTAAPGS-PTPGGVDLALNMAFGFAGGNF---------- 336
Query: 380 PVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATY 439
T+NG SF P P+ L + A L + P D
Sbjct: 337 ----------TINGASFTPPTVPVLLQILSGAQSAADLLPAGSVYSLPANAD-------- 378
Query: 440 KGFIEIILQNNDTK---MQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISK-CTTEV 495
IEI L FH+ G+ F VV + ++YN + + + +
Sbjct: 379 ---IEISLPATAAAPGFPHPFHLHGHVFAVV-------RSAGSSTYNYANPVYRDVVSTG 428
Query: 496 YPGAWTAILVSLDNVGVWNLRVE 518
PG I DN G W L
Sbjct: 429 APGDNVTIRFRTDNPGPWFLHCH 451
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 191/499 (38%), Gaps = 68/499 (13%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFP-----GXXXXXXXXXXXXXXXXXXXXESLLMTWP 88
D +S SP G +Q I +N FP G +S + W
Sbjct: 7 DLTISNGAVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVII 147
G +W DG N CPI + + Y FQV DQ G+F+Y L+ Q G GP+++
Sbjct: 67 GFFQHGTNWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVV 126
Query: 148 ----NNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPY 203
+ K + +D + + + DWY H A + G + D LING G
Sbjct: 127 YDPQDPHKSL---YDVDDDSTVITLADWY---HLAAKV----GSPVPTADATLINGLG-- 174
Query: 204 RYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQN 263
R TL D I V GK YR R+ ++ + F I H+L ++E + Q
Sbjct: 175 RSIDTLNAD---LAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQT 231
Query: 264 YTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASG 323
S +I Q YSF++ DQ+ +Y+I A +F V AIL Y GAA
Sbjct: 232 VDSIQIFAAQRYSFVLNADQDV-GNYWIRALPNSGTRNFDGGVNS-AILRY---DGAA-- 284
Query: 324 PLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTI 383
P+ S + + + + T+A G+ P P G ++N+ +
Sbjct: 285 PVEPTTSQTPSTNPLVESALTTLEGTAAPGS-PAPGGVDL--ALNMAFGFA--------- 332
Query: 384 DGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSL---INATYK 440
GK T+NG SF P P+ L + A L + P D + A
Sbjct: 333 GGKF--TINGASFTPPTVPVLLQILSGAQSAQDLLPSGSVYSLPANADIEISLPATAAAP 390
Query: 441 GFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISK-CTTEVYPGA 499
GF FH+ G++F VV + ++YN + + + + PG
Sbjct: 391 GF-----------PHPFHLHGHTFAVV-------RSAGSSTYNYENPVYRDVVSTGSPGD 432
Query: 500 WTAILVSLDNVGVWNLRVE 518
I DN G W L
Sbjct: 433 NVTIRFRTDNPGPWFLHCH 451
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 121/293 (41%), Gaps = 24/293 (8%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFPGXXXXXX-----XXXXXXXXXXXXXXESLLMTWP 88
D ++ SP G +Q + +NG PG +S + W
Sbjct: 7 DLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGP-VI 146
G +W DG N CPI ++ Y FQV DQ G+F+Y L+ Q G GP V+
Sbjct: 67 GFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 147 INNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTA--LDSGKDLDMPDGVLINGKGPYR 204
+ +D D + + DWY HTA + G D LINGKG
Sbjct: 127 YDPNDPHASRYDVDNDDTVITLADWY---HTAAKLGPRFPGGAD-----ATLINGKGRAP 178
Query: 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264
++ E I V GK YR R+ ++ + + F I HNL ++E + +
Sbjct: 179 SDSVA-----ELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEV 233
Query: 265 TSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNS 317
S +I Q YSF++ +Q A +Y+I A+ F N F + AIL Y +
Sbjct: 234 DSIQIFAAQRYSFVLDANQ-AVDNYWIRANPNFGNVGFDGGINS-AILRYDGA 284
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 121/293 (41%), Gaps = 24/293 (8%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFPGXXXXXX-----XXXXXXXXXXXXXXESLLMTWP 88
D ++ SP G +Q + +NG PG +S + W
Sbjct: 7 DLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGP-VI 146
G +W DG N CPI ++ Y FQV DQ G+F+Y L+ Q G GP V+
Sbjct: 67 GFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 147 INNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTA--LDSGKDLDMPDGVLINGKGPYR 204
+ +D D + + DWY HTA + G D LINGKG
Sbjct: 127 YDPNDPHASRYDVDNDDTVITLADWY---HTAAKLGPRFPGGAD-----ATLINGKGRAP 178
Query: 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264
++ E I V GK YR R+ ++ + + F I HNL ++E + +
Sbjct: 179 SDSVA-----ELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEV 233
Query: 265 TSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNS 317
S +I Q YSF++ +Q A +Y+I A+ F N F + AIL Y +
Sbjct: 234 DSIQIFAAQRYSFVLDANQ-AVDNYWIRANPNFGNVGFDGGINS-AILRYDGA 284
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 85 MTWPGIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFG 143
+ W G+ R +W DG G N CPI + Y+F G+F+Y Q G G
Sbjct: 63 IHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRG 122
Query: 144 PVII-NNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGP 202
P++I ++ +D+ + + I + DWY +++ A PD LINGKG
Sbjct: 123 PMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQGAA-------QPDATLINGKGR 175
Query: 203 YRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQ 262
Y E +NV+ GK YR+R+ ++ + F I H L ++E +G T
Sbjct: 176 YVGGPA-----AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPH 230
Query: 263 NYTSFEIHVGQSYSFLVTMDQNASSDYY 290
+I GQ YSF+ +D N D Y
Sbjct: 231 TVDRLQIFTGQRYSFV--LDANQPVDNY 256
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 87 WPGIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPV 145
W G+ R +W DG G N CPI + Y+F G+F+Y Q G GP+
Sbjct: 65 WHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPM 124
Query: 146 II-NNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYR 204
+I ++ +D+ + + I + DWY +++ A PD LINGKG Y
Sbjct: 125 VIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQGAA-------QPDATLINGKGRYV 177
Query: 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264
E +NV+ GK YR+R+ ++ + F I H L ++E +G T
Sbjct: 178 GGPA-----AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232
Query: 265 TSFEIHVGQSYSFLVTMDQNASSDYY 290
+I GQ YSF+ +D N D Y
Sbjct: 233 DRLQIFTGQRYSFV--LDANQPVDNY 256
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 121/290 (41%), Gaps = 24/290 (8%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFPGXXXXXXXXXXXXXXXXXXXXESLLMT-----WP 88
D ++ SP G +Q + +NG PG ++ W
Sbjct: 7 DNTITDAATSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGP-VI 146
G + +W DG N CPI ++ Y FQV +Q G+F+Y L+ Q G GP V+
Sbjct: 67 GFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 147 INNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTA--LDSGKDLDMPDGVLINGKGPYR 204
+ +D D + + DWY HTA + +G D LINGKG
Sbjct: 127 YDPNDPHASRYDVDNDDTVITLADWY---HTAAKLGPRFPAGAD-----ATLINGKGRAP 178
Query: 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264
+T+ E I V GK R R+ ++ + F I HNL ++E + + +
Sbjct: 179 SDTSA-----ELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSV 233
Query: 265 TSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHY 314
S +I Q YSF++ +Q A +Y+I A+ F N F + AIL Y
Sbjct: 234 DSIQIFAAQRYSFVLNANQ-AVDNYWIRANPNFGNVGFNGGINS-AILRY 281
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 118/292 (40%), Gaps = 22/292 (7%)
Query: 37 VSYITASPLGVPQQVIAINGKFP-----GXXXXXXXXXXXXXXXXXXXXESLLMTWPGIQ 91
V+ SP G + I +NG FP G +S + W G
Sbjct: 10 VANAPVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFF 69
Query: 92 MRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNR 150
+W DG N CPI S ++ Y F V DQ G+F+Y L+ Q G GP ++ +
Sbjct: 70 QAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDP 129
Query: 151 KVIPIP-FDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDM-PDGVLINGKGPYRYNTT 208
K +D + + DWY HTA R G + D LING G T
Sbjct: 130 KDPHASRYDVDNESTVITLTDWY---HTAARL----GPRFPLGADATLINGLGRSASTPT 182
Query: 209 LVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFE 268
INV GK YR R+ ++ + F I HNL ++E +G + S +
Sbjct: 183 AA-----LAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQ 237
Query: 269 IHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGA 320
I Q YSF++ +Q +Y+I A+ F F + AIL Y + A
Sbjct: 238 IFAAQRYSFVLNANQTV-GNYWIRANPNFGTVGFAGGINS-AILRYQGAPVA 287
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 121/290 (41%), Gaps = 24/290 (8%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFPGXXXXXXXXXXXXXXXXXXXXESLLMT-----WP 88
D ++ SP G +Q + +NG PG ++ W
Sbjct: 7 DNTITNAATSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGP-VI 146
G + +W DG N CPI ++ Y FQV +Q G+F+Y L+ Q G GP V+
Sbjct: 67 GFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 147 INNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA--LRTALDSGKDLDMPDGVLINGKGPYR 204
+ +D D + DWY HTA L A +G D LINGKG
Sbjct: 127 YDPNDPHASRYDVDNDDTTITLADWY---HTAAKLGPAFPNGAD-----STLINGKGRAP 178
Query: 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264
+++ + ++V GK R R+ ++ + F I HN ++ET+ + N
Sbjct: 179 SDSSA-----QLSVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNT 233
Query: 265 TSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHY 314
S +I Q YSF + +Q A +Y+I A+ F N F + AIL Y
Sbjct: 234 DSIQIFAAQRYSFTLNANQ-AVDNYWIRANPNFGNVGFNGGINS-AILRY 281
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 160/403 (39%), Gaps = 51/403 (12%)
Query: 87 WPGIQMRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGP- 144
W G + +W DG T CPI +++Y F V G+++Y L Q G GP
Sbjct: 66 WHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPF 125
Query: 145 VIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYR 204
V+ + +D + I + DWY L + +G + D LI+G G
Sbjct: 126 VVYDPNDPDANLYDVDDDTTIITLADWYH----VLAKEMGAGGAI-TADSTLIDGLGRTH 180
Query: 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264
N VP I V+ GK YR+R+ ++ + +F I H++ ++ET+G + +
Sbjct: 181 VNVAAVP----LSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTV 236
Query: 265 TSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGP 324
+I Q YSF++ +Q +Y+I A+ E F + AIL Y GA +
Sbjct: 237 DEIQIFAAQRYSFVLNANQPV-GNYWIRANPNSGGEGFDGGINS-AILRY---DGATTAD 291
Query: 325 LPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTID 384
S ++ + T + +N G NP ++N++ + +
Sbjct: 292 PVTVASTVHTKCLIETDLHPLSRN----GVPGNPHQGGADCNLNLSLGFACGNF------ 341
Query: 385 GKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIE 444
+NG+SF P P+ L A L P+ S+I+ IE
Sbjct: 342 -----VINGVSFTPPTVPVLLQICSGANTAADL-LPSG----------SVISLPSNSTIE 385
Query: 445 IILQNNDTKM-QSFHMDGYSFFVVGMDFGIWTESNRNSYNKWD 486
I L FH+ G+ F V +ES NS + +D
Sbjct: 386 IALPAGAAGGPHPFHLHGHDFAV--------SESASNSTSNYD 420
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 120/292 (41%), Gaps = 20/292 (6%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFP-----GXXXXXXXXXXXXXXXXXXXXESLLMTWP 88
D V+ P G + I +N FP G ++ + W
Sbjct: 7 DLTVTNANIVPDGFERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGP-VI 146
G + +W DG N CPI S ++ Y FQV Q G+F+Y L+ Q G GP V+
Sbjct: 67 GFFQKGTNWADGPAFINQCPIASGNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 147 INNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYN 206
+ +D + + + DWY H A + K D LING G R
Sbjct: 127 YDPNDPHANLYDVDDESTVITLADWY---HVAAKLGPRFPKGAD---STLINGLG--RST 178
Query: 207 TTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTS 266
+T D I+V GK YR R+ ++ + F I +H L ++E +G T S
Sbjct: 179 STPTAD---LAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDS 235
Query: 267 FEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318
+I Q YSF++ +Q+ +Y+I A+ F F V AIL Y ++
Sbjct: 236 IQIFAAQRYSFVLNANQDV-DNYWIRANPNFGTTGFADGVNS-AILRYDDAD 285
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 119/293 (40%), Gaps = 24/293 (8%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFP-----GXXXXXXXXXXXXXXXXXXXXESLLMTWP 88
D ++ SP G ++ + +NG P G ++ + W
Sbjct: 7 DLTLTNAQVSPDGFAREAVVVNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGP-VI 146
G + +W DG N CPI S ++ Y FQV DQ G+F+Y L+ Q G GP V+
Sbjct: 67 GFFQQGTNWADGPAFVNQCPIASGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVV 126
Query: 147 INNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTA--LDSGKDLDMPDGVLINGKGPYR 204
+ +D D + + DWY H A + G D LING G
Sbjct: 127 YDPNDPHASLYDIDNDDTVITLADWY---HVAAKLGPRFPFGSD-----STLINGLG--- 175
Query: 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264
T + P + I V GK YR R+ ++ + F I NH + ++E + T
Sbjct: 176 RTTGIAPS--DLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEV 233
Query: 265 TSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNS 317
S +I Q YSF++ Q +Y+I A+ F N F + AIL Y +
Sbjct: 234 DSIQIFAAQRYSFVLDASQPV-DNYWIRANPAFGNTGFAGGINS-AILRYDGA 284
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 197/528 (37%), Gaps = 76/528 (14%)
Query: 34 DFKVSYITASPLGVPQQVIAINGKFPGXXXXXXXXXXXXXXXXXXXXESLLMT-----WP 88
D +S +P G + + NG FPG + ++ W
Sbjct: 7 DLTISNADVTPDGFTRAAVVANGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWH 66
Query: 89 GIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVII 147
G+ +W DG N CPI S ++ Y F V DQ G+F+Y L+ Q G GP+++
Sbjct: 67 GLFQHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVV 126
Query: 148 -NNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYN 206
+ +D + + + DWY HTA + + D VLING G +
Sbjct: 127 YDPSDPYASMYDVDDDTTVITLSDWY---HTAAKLGPAFPPNAD---SVLINGLGRFAGG 180
Query: 207 TTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTS 266
+ + I V+ K YR R+ ++ + F I HN+ ++E +G S
Sbjct: 181 -----NASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDS 235
Query: 267 FEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTG---VAILHYSNSKGAASG 323
+I Q YSF++ Q+ +Y+I R + + TG AIL YS
Sbjct: 236 IQIFASQRYSFVLNATQSV-DNYWI----RAIPNTGTIDTTGGLNSAILRYSG------- 283
Query: 324 PLPEAPSDIYNQWA-AMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVT 382
+DI + A A T + + P G G +++ +
Sbjct: 284 ------ADIVDPTANATTSVIPLVETDLVPLDSPAAPGDPVVGGVDLA----------MN 327
Query: 383 IDGKVRST---LNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATY 439
+D T +N + + P P+ L + A L T P +N+T
Sbjct: 328 LDFSFNGTNFFINNETLIPPTVPVLLQILSGAQSASDLLPTGSVYTLP-------LNSTI 380
Query: 440 KGFIEIILQNNDTKM----QSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEV 495
+ I N T FH+ G++F VV + + YN + + + T
Sbjct: 381 ELSFPITTVNGVTNAPGAPHPFHLHGHAFSVV-------RSAGSSDYNYVNPVRRDTVST 433
Query: 496 -YPGAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEENGDT 542
PG I + DN G W L +D ++L E IV E+ DT
Sbjct: 434 GNPGDNVTIRFTTDNAGPWFLHCH-ID-FHL--EAGFAIVFAEDTPDT 477
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 132/334 (39%), Gaps = 33/334 (9%)
Query: 33 YDFKVSYITASPLGVPQQVIAINGKFPGXXXXXX-XXXXXXXXXXXXXXESLLMTWPGIQ 91
Y V T +P G + + NG PG + W GI+
Sbjct: 70 YWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIR 129
Query: 92 MRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNR 150
+ DGV G T CPI TY+FQV Q G+ +Y +LQ G FGP+IIN
Sbjct: 130 QLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIING- 187
Query: 151 KVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMP---DGVLINGKGPYRYNT 207
P D E + + DW H ++ D+ + L P + L+NG + +
Sbjct: 188 ---PATADYDEDVGVIFLQDWA---HESVFEIWDTAR-LGAPPALENTLMNGTNTFDCSA 240
Query: 208 TLVPD----GIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQN 263
+ P+ G ++E V+ G YR+R+ NVG + F I NH L ++ +
Sbjct: 241 STDPNCVGGGKKFELTFVE-GTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYT 299
Query: 264 YTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASG 323
+ I +GQ Y +V + NA++D Y W R +N A+G
Sbjct: 300 TDTLLIGIGQRYDVIV--EANAAADNY------------WIRGNWGTTCSTNNEAANATG 345
Query: 324 PLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPN 357
L S I N + T PR ++ + P+
Sbjct: 346 ILRYDSSSIANPTSVGTTPRGTCEDEPVASLVPH 379
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 132/334 (39%), Gaps = 33/334 (9%)
Query: 33 YDFKVSYITASPLGVPQQVIAINGKFPGXXXXXX-XXXXXXXXXXXXXXESLLMTWPGIQ 91
Y V T +P G + + NG PG + W GI+
Sbjct: 70 YWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIR 129
Query: 92 MRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNR 150
+ DGV G T CPI TY+FQV Q G+ +Y +LQ G FGP+IIN
Sbjct: 130 QLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHFSLQYGDGLFGPLIING- 187
Query: 151 KVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMP---DGVLINGKGPYRYNT 207
P D E + + DW H ++ D+ + L P + L+NG + +
Sbjct: 188 ---PATADYDEDVGVIFLQDWA---HESVFEIWDTAR-LGAPPALENTLMNGTNTFDCSA 240
Query: 208 TLVPD----GIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQN 263
+ P+ G ++E V+ G YR+R+ NVG + F I NH L ++ +
Sbjct: 241 STDPNCVGGGKKFELTFVE-GTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYT 299
Query: 264 YTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASG 323
+ I +GQ Y +V + NA++D Y W R +N A+G
Sbjct: 300 TDTLLIGIGQRYDVIV--EANAAADNY------------WIRGNWGTTCSTNNEAANATG 345
Query: 324 PLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPN 357
L S I N + T PR ++ + P+
Sbjct: 346 ILRYDSSSIANPTSVGTTPRGTCEDEPVASLVPH 379
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 169/465 (36%), Gaps = 92/465 (19%)
Query: 81 ESLLMTWPGIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVS 139
+S + W G + +W DG N CPI + ++ Y F Q G+F+Y L+ Q
Sbjct: 59 KSTSVHWHGFFQKGTNWADGPAFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSHLSTQYCD 118
Query: 140 GGFGP-VIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRT--ALDSGKDLDMPDGVL 196
G GP V+ + +D + + + DWY HTA + A G D + +G
Sbjct: 119 GDRGPFVVYDPNDPSANLYDVDNLNTVITLTDWY---HTAAQNGPAKPGGADATLING-- 173
Query: 197 INGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEG 256
G+GP + L I+V GK YR R+ + + F I H + +++ +
Sbjct: 174 -QGRGPSSPSADLA-------VISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDS 225
Query: 257 HYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSN 316
+I+ Q YSF++ +Q A ++Y+I A+ N F + AIL YS
Sbjct: 226 INVQPLVVLKIQIYAAQRYSFILNANQ-AVNNYWIRANPNQGNVGFTNGINS-AILRYSG 283
Query: 317 SKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLR 376
AA TQP + + S +P Q + H
Sbjct: 284 --------------------AAATQPTT----SQTSSVQPLDQTNLH--------PLTAT 311
Query: 377 SLPPVTIDGKVRSTLN-------------GISFVKPETPIRLADKYNVKGAYKLDFPNKP 423
++P + G V +N G SFV P P+ + A L
Sbjct: 312 AVPGSPVAGGVNLAINQAFNFNGTNHFVDGASFVPPTVPVLSQIVSGAQSAADLLASGLV 371
Query: 424 LTRPPRTDRSLINATYKGFIEIILQNNDTKM---QSFHMDGYSFFVVGMDFGIWTESNRN 480
+ P + IEI FH+ G++F VV +
Sbjct: 372 YSLPSDAN-----------IEISFPATSAAAGGPHPFHLHGHAFAVV-------RSAGST 413
Query: 481 SYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNLRVENLDRWYL 525
+YN D I + T T + DNV + + N W+L
Sbjct: 414 TYNYNDPIFRDTVS------TGTPAANDNVTI-RFKTNNPGPWFL 451
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 144/383 (37%), Gaps = 41/383 (10%)
Query: 87 WPGIQMRRNSWQDGVQGTN-CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPV 145
W G + DG N CPI ++ Y F V Q G+++Y L+ Q G G
Sbjct: 86 WHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAF 145
Query: 146 IINNRKVIPIP-FDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYR 204
++ + + +D + + I DWY T L + D LING G
Sbjct: 146 VVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFPNPNKAPPAP--DTTLINGLGRNS 203
Query: 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264
N P + ++V GK YR R+ + + F I H + ++E +G
Sbjct: 204 AN----PSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTV 259
Query: 265 TSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGP 324
S I GQ YS +V +Q A +Y+I A+ F + AI Y +GAA
Sbjct: 260 DSLTIFAGQRYSVVVEANQ-AVGNYWIRANPSNGRNGFTGGINS-AIFRY---QGAAVA- 313
Query: 325 LPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTID 384
P+ N A+ + I + P P G+ IN+ LR T
Sbjct: 314 ---EPTTSQNSGTALNEANLIPLINPGAPGNPVPGGA----DINLN----LRIGRNAT-- 360
Query: 385 GKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIE 444
T+NG F+ P P+ L V PN L ++I+ IE
Sbjct: 361 -TADFTINGAPFIPPTVPVLLQILSGVTN------PNDLL-----PGGAVISLPANQVIE 408
Query: 445 IILQNNDTKMQSFHMDGYSFFVV 467
I + FH+ G++F VV
Sbjct: 409 ISIPGGGN--HPFHLHGHNFDVV 429
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 33/246 (13%)
Query: 87 WPGIQMRRNSWQDGVQG-TNCPIPSQWNW-TYQFQVKDQIGSFFYFPSLNLQRVSGGFGP 144
W GI + + DG G T CPIP + TY+++ + Q G+ +Y + Q +G G
Sbjct: 94 WHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGT 152
Query: 145 VIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYR 204
+ IN +P D +F I D+Y R L D VLING
Sbjct: 153 IQINGPASLPYDIDLG----VFPITDYYYRAADDL-VHFTQNNAPPFSDNVLING----- 202
Query: 205 YNTTLVPDGIE--YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQ 262
T + P+ E Y + + PGK +R+R+ N T + NH + ++ + +
Sbjct: 203 --TAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAM 260
Query: 263 NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESF-WQRVTG-------VAILHY 314
S + VGQ Y V +D + + D Y + N +F Q G AI HY
Sbjct: 261 TVDSLFLAVGQRYD--VVIDASRAPDNY------WFNVTFGGQAACGGSLNPHPAAIFHY 312
Query: 315 SNSKGA 320
+ + G
Sbjct: 313 AGAPGG 318
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 33/246 (13%)
Query: 87 WPGIQMRRNSWQDGVQG-TNCPIPSQWNW-TYQFQVKDQIGSFFYFPSLNLQRVSGGFGP 144
W GI + + DG G T CPIP + TY+++ + Q G+ +Y + Q +G G
Sbjct: 94 WHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGT 152
Query: 145 VIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYR 204
+ IN +P D +F I D+Y R L D VLING
Sbjct: 153 IQINGPASLPYDIDLG----VFPITDYYYRAADDL-VHFTQNNAPPFSDNVLING----- 202
Query: 205 YNTTLVPDGIE--YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQ 262
T + P+ E Y + + PGK +R+R+ N T + NH + ++ + +
Sbjct: 203 --TAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAM 260
Query: 263 NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESF-WQRVTG-------VAILHY 314
S + VGQ Y V +D + + D Y + N +F Q G AI HY
Sbjct: 261 TVDSLFLAVGQRYD--VVIDASRAPDNY------WFNVTFGGQAACGGSLNPHPAAIFHY 312
Query: 315 SNSKGA 320
+ + G
Sbjct: 313 AGAPGG 318
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 33/246 (13%)
Query: 87 WPGIQMRRNSWQDGVQG-TNCPIPSQWNW-TYQFQVKDQIGSFFYFPSLNLQRVSGGFGP 144
W GI + + DG G T CPIP + TY+++ + Q G+ +Y + Q +G G
Sbjct: 94 WHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSHFSAQYGNGVVGT 152
Query: 145 VIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYR 204
+ IN +P D +F I D+Y R L D VLING
Sbjct: 153 IQINGPASLPYDIDLG----VFPITDYYYRAADDL-VHFTQNNAPPFSDNVLING----- 202
Query: 205 YNTTLVPDGIE--YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQ 262
T + P+ E Y + + PGK +R+R+ N T + NH + ++ + +
Sbjct: 203 --TAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAM 260
Query: 263 NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESF-WQRVTG-------VAILHY 314
S + VGQ Y V +D + + D Y + N +F Q G AI HY
Sbjct: 261 TVDSLFLAVGQRYD--VVIDASRAPDNY------WFNVTFGGQAACGGSLNPHPAAIFHY 312
Query: 315 SNSKGA 320
+ + G
Sbjct: 313 AGAPGG 318
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 15/208 (7%)
Query: 85 MTWPGIQMRRNSWQDGVQG-TNCPIPSQWNW-TYQFQVKDQIGSFFYFPSLNLQRVSGGF 142
M W G++ N + DG G T CPIP + TY+F+ Q G+ +Y + Q +G
Sbjct: 133 MHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRAT-QYGTSWYHSHFSAQYGNGVV 191
Query: 143 GPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGP 202
G + I+ +P D +F + D+Y R+ L D VL NG
Sbjct: 192 GTIQIDGPASLPYDIDLG----VFPLMDYYYRSADEL-VHFTQSNGAPPSDNVLFNGTA- 245
Query: 203 YRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQ 262
R+ T ++ + + PGK +R+R+ N T + HN+ ++ T+ +
Sbjct: 246 -RHPET---GAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAF 301
Query: 263 NYTSFEIHVGQSYSFLVTMDQNASSDYY 290
+S + VGQ Y VT+D N+ Y
Sbjct: 302 TVSSLFLAVGQRYD--VTIDANSPVGNY 327
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 147/404 (36%), Gaps = 73/404 (18%)
Query: 85 MTWPGIQMRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFG 143
M + G+ + DGV T CPI Y F V +G+++Y + Q G G
Sbjct: 59 MHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKG 118
Query: 144 PVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPY 203
II + P+D E ++ + +WY T L + S + N G
Sbjct: 119 LFIIKDDS---FPYDYDE-ELSLSLSEWYHDLVTDLTKSFMS----------VYNPTGAE 164
Query: 204 RYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQN 263
L+ + T V P TY +R+ NVG S F I++H + +VE +G T+++N
Sbjct: 165 PIPQNLIVNNTMNLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDG-ITTEKN 223
Query: 264 YTS-FEIHVGQSYSFLVTMDQNASSDYYI-----------VASARFVNESFWQRVTGVAI 311
T I V Q Y+ LV + ++ I + S +N + + A
Sbjct: 224 VTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAA 283
Query: 312 LHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITD 371
L N + L + Y + A +P + IT
Sbjct: 284 LPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHV-----------------------ITV 320
Query: 372 TYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRL-----ADKYNVKGAYKLDFPNKPLTR 426
V+ +L +G + N I++ P+ P + D+ N Y + L +
Sbjct: 321 DVVMDNLK----NGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEK 376
Query: 427 PPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMD 470
+EI+L N DT FH+ G++F + D
Sbjct: 377 -------------DEIVEIVLNNQDTGTHPFHLHGHAFQTIQRD 407
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 95/256 (37%), Gaps = 34/256 (13%)
Query: 41 TASPLGVPQQ---VIAINGKFPGXXXXXXXXXXXXXXXXXXXXESLLMTWPGIQMRRNSW 97
T +PL + Q ++ G FPG E + W G+ +
Sbjct: 24 TPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPI----- 78
Query: 98 QDGVQGTNCPIPSQWNWTYQFQV-KDQIGSFFYFPSLN----LQRVSGGFGPVIINNRKV 152
V IP +WTY+F V K+ G+F+Y P L+ Q +G G +++ +
Sbjct: 79 SPKVDDPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLD 138
Query: 153 IPIPFDQPEGDIIFLIGDWYTRNHTALRTALD--SGKDLDMPDGVLINGKGPYRYNTTLV 210
+ E ++ L A T +D +GK+ D+ VL+NG TLV
Sbjct: 139 AIPELREAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDL---VLVNGA----LRPTLV 191
Query: 211 PDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQ-NYTSFEI 269
T R+R+ N + +Q+H L L+ +G + + + +
Sbjct: 192 AQ-----------KATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLL 240
Query: 270 HVGQSYSFLVTMDQNA 285
G+ LV + +
Sbjct: 241 APGERAEVLVRLRKEG 256
>pdb|3KYH|A Chain A, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus
pdb|3KYH|B Chain B, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus
Length = 310
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 160 PEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYN 206
P+ D+ + DW ++ L S +L+M GV+I+ KGP R N
Sbjct: 38 PDDDLTKSVQDWVYATIYSIAPELRSFIELEMKFGVIIDAKGPDRVN 84
>pdb|1D8H|A Chain A, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With Sulfate And Manganese Ions.
pdb|1D8H|B Chain B, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With Sulfate And Manganese Ions.
pdb|1D8H|C Chain C, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With Sulfate And Manganese Ions.
pdb|1D8I|A Chain A, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With A Sulfate Ion.
pdb|1D8I|B Chain B, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With A Sulfate Ion.
pdb|1D8I|C Chain C, X-Ray Crystal Structure Of Yeast Rna Triphosphatase In
Complex With A Sulfate Ion
Length = 311
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 160 PEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYN 206
P+ D+ + DW ++ L S +L+M GV+I+ KGP R N
Sbjct: 39 PDDDLTKSVQDWVYATIYSIAPELRSFIELEMKFGVIIDAKGPDRVN 85
>pdb|2BGN|E Chain E, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|F Chain F, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|G Chain G, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
pdb|2BGN|H Chain H, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat
(1-9) Bound To The Active Site Of Dipeptidyl Peptidase
Iv (Cd26)
Length = 363
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 142 FGPVIINNRKVIPIPFDQPEGDI 164
+ P ++ N KV PIP++Q EGD+
Sbjct: 102 YSPHLLANSKVEPIPWNQAEGDL 124
>pdb|3IAR|A Chain A, The Crystal Structure Of Human Adenosine Deaminase
Length = 367
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 142 FGPVIINNRKVIPIPFDQPEGDI 164
+ P ++ N KV PIP++Q EGD+
Sbjct: 99 YSPHLLANSKVEPIPWNQAEGDL 121
>pdb|1W1I|E Chain E, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|F Chain F, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|G Chain G, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
pdb|1W1I|H Chain H, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or
Cd26) In Complex With Adenosine Deaminase
Length = 357
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 142 FGPVIINNRKVIPIPFDQPEGDI 164
+ P ++ N KV PIP++Q EGD+
Sbjct: 102 YSPHLLANSKVEPIPWNQAEGDL 124
>pdb|1NDV|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Fr117016
pdb|1NDW|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Fr221647
pdb|1NDY|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Fr230513
pdb|1NDZ|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Fr235999
pdb|1O5R|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With A
Potent Inhibitor
pdb|1UML|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With A
Potent Inhibitor Fr233624
pdb|1V79|A Chain A, Crystal Structures Of Adenosine Deaminase Complexed With
Potent Inhibitors
pdb|1V7A|A Chain A, Crystal Structures Of Adenosine Deaminase Complexed With
Potent Inhibitors
pdb|1VFL|A Chain A, Adenosine Deaminase
pdb|1WXY|A Chain A, Crystal Structure Of Adenosine Deaminase Ligated With A
Potent Inhibitor
pdb|1WXZ|A Chain A, Crystal Structure Of Adenosine Deaminase Ligated With A
Potent Inhibitor
pdb|2E1W|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Potent Inhibitors
pdb|2Z7G|A Chain A, Crystal Structure Of Adenosine Deaminase Ligated With Ehna
Length = 356
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 142 FGPVIINNRKVIPIPFDQPEGDI 164
+ P ++ N KV PIP++Q EGD+
Sbjct: 101 YSPHLLANSKVEPIPWNQAEGDL 123
>pdb|1KRM|A Chain A, Crystal Structure Of Bovine Adenosine Deaminase Complexed
With 6-Hydroxyl-1,6-Dihydropurine Riboside
pdb|1QXL|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With
Fr235380
Length = 356
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 142 FGPVIINNRKVIPIPFDQPEGDI 164
+ P ++ N KV PIP++Q EGD+
Sbjct: 101 YSPHLLANSKVEPIPWNQAEGDL 123
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 228 RVRVHNVGTSTSLNFRIQNHNLLLVETEG 256
R+R++N + LN RIQ +LV T+G
Sbjct: 231 RIRIYNATAARYLNLRIQGAKFILVGTDG 259
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,526,665
Number of Sequences: 62578
Number of extensions: 801474
Number of successful extensions: 1490
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1398
Number of HSP's gapped (non-prelim): 51
length of query: 595
length of database: 14,973,337
effective HSP length: 104
effective length of query: 491
effective length of database: 8,465,225
effective search space: 4156425475
effective search space used: 4156425475
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)