Query 007635
Match_columns 595
No_of_seqs 285 out of 2208
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 06:43:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007635.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007635hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 3E-102 1E-106 863.1 54.1 507 28-558 1-543 (552)
2 3sqr_A Laccase; multicopper ox 100.0 3.7E-99 1E-103 832.1 55.7 488 28-559 65-567 (580)
3 1zpu_A Iron transport multicop 100.0 1.6E-97 6E-102 819.3 50.1 484 29-560 1-506 (534)
4 3pxl_A Laccase; 4-copper prote 100.0 9.5E-97 3E-101 803.9 48.6 479 31-561 4-496 (499)
5 3t6v_A Laccase; beta barrel, o 100.0 6.2E-97 2E-101 805.5 46.2 478 31-557 5-492 (495)
6 1v10_A Laccase; multicopper bl 100.0 1.7E-95 6E-100 802.3 45.9 484 28-560 21-515 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 3.5E-93 1.2E-97 781.2 44.3 478 32-562 6-496 (503)
8 2q9o_A Laccase-1; multicopper 100.0 2.2E-91 7.5E-96 775.2 55.2 489 27-560 30-547 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 3.4E-84 1.2E-88 699.4 39.5 404 26-534 12-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 7.9E-84 2.7E-88 697.4 31.9 407 29-537 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 3.5E-82 1.2E-86 696.0 36.7 422 29-537 35-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 4.1E-81 1.4E-85 687.2 38.5 428 29-536 24-511 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 6.1E-80 2.1E-84 667.5 39.0 410 24-534 44-480 (481)
14 3gyr_A PHS, phenoxazinone synt 100.0 2.4E-79 8.3E-84 690.7 37.6 459 28-538 30-594 (612)
15 3aw5_A Multicopper oxidase; be 100.0 9.8E-80 3.3E-84 664.4 30.6 385 52-534 28-448 (448)
16 3od3_A Blue copper oxidase CUE 100.0 2.8E-77 9.6E-82 646.3 33.5 416 29-533 16-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 2.1E-76 7.1E-81 654.9 40.8 447 28-536 30-592 (612)
18 2j5w_A Ceruloplasmin, ferroxid 100.0 2.9E-56 9.9E-61 525.9 36.0 393 21-469 12-487 (1065)
19 3g5w_A Multicopper oxidase typ 100.0 3E-53 1E-57 437.8 28.7 270 29-317 1-277 (318)
20 2zwn_A Two-domain type laccase 100.0 6E-52 2.1E-56 432.6 29.4 271 29-318 2-279 (339)
21 2r7e_A Coagulation factor VIII 100.0 2.4E-54 8.1E-59 490.5 10.0 239 34-296 50-314 (742)
22 1kbv_A ANIA, major outer membr 100.0 4.6E-49 1.6E-53 408.8 28.1 263 25-318 33-309 (327)
23 2dv6_A Nitrite reductase; elec 100.0 6.5E-49 2.2E-53 425.9 26.0 401 26-538 24-436 (447)
24 3gdc_A Multicopper oxidase; be 100.0 5.4E-47 1.8E-51 386.3 28.0 235 29-296 33-273 (288)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 1.1E-48 3.9E-53 461.2 16.6 411 47-537 616-1060(1065)
26 2zoo_A Probable nitrite reduct 100.0 1.6E-45 5.6E-50 398.5 27.9 263 25-318 23-299 (442)
27 3kw8_A Laccase, putative coppe 100.0 1.6E-44 5.4E-49 365.9 25.5 224 26-296 3-250 (276)
28 1mzy_A Copper-containing nitri 100.0 2.5E-44 8.5E-49 374.8 27.4 270 24-318 26-320 (333)
29 1oe1_A Dissimilatory copper-co 100.0 8.8E-45 3E-49 378.8 22.9 268 25-318 27-320 (336)
30 3tas_A Small laccase, multi-co 100.0 4.8E-44 1.6E-48 368.7 24.1 242 23-316 6-271 (313)
31 3t9w_A Small laccase, multi-co 100.0 8.3E-44 2.8E-48 364.1 23.3 226 24-296 23-272 (299)
32 2bw4_A Copper-containing nitri 100.0 4.8E-44 1.6E-48 373.8 20.7 269 24-318 32-326 (340)
33 3cg8_A Laccase; oxidoreductase 100.0 7.5E-41 2.6E-45 348.5 24.9 238 27-317 45-307 (343)
34 1sdd_B Coagulation factor V; c 100.0 2.3E-40 7.9E-45 373.9 24.1 248 27-296 3-312 (647)
35 1sdd_A Coagulation factor V; c 100.0 8.1E-42 2.8E-46 351.1 7.9 214 50-296 50-285 (306)
36 2r7e_B Coagulation factor VIII 100.0 8.7E-41 3E-45 379.8 13.6 249 27-296 130-441 (770)
37 2dv6_A Nitrite reductase; elec 100.0 1.6E-38 5.5E-43 344.3 29.4 258 28-318 161-435 (447)
38 2r7e_A Coagulation factor VIII 100.0 1.1E-36 3.7E-41 345.7 10.0 215 56-296 447-696 (742)
39 3gdc_A Multicopper oxidase; be 99.9 6.7E-27 2.3E-31 238.0 16.7 233 192-535 54-288 (288)
40 2zwn_A Two-domain type laccase 99.9 2.2E-26 7.4E-31 239.6 20.3 246 192-535 23-277 (339)
41 3cg8_A Laccase; oxidoreductase 99.9 1.1E-26 3.6E-31 241.8 17.2 216 216-538 76-309 (343)
42 3g5w_A Multicopper oxidase typ 99.9 7.6E-26 2.6E-30 233.1 18.3 248 193-536 23-277 (318)
43 3kw8_A Laccase, putative coppe 99.9 5.2E-25 1.8E-29 222.6 16.9 215 216-538 35-268 (276)
44 3t9w_A Small laccase, multi-co 99.9 6.5E-25 2.2E-29 224.2 16.0 216 216-538 57-290 (299)
45 3tas_A Small laccase, multi-co 99.9 4.6E-24 1.6E-28 219.5 21.0 232 216-556 41-290 (313)
46 1sdd_A Coagulation factor V; c 99.9 9.3E-23 3.2E-27 209.2 6.2 228 217-536 60-301 (306)
47 1sdd_B Coagulation factor V; c 99.8 1.3E-20 4.3E-25 212.7 18.3 264 216-556 68-351 (647)
48 1kbv_A ANIA, major outer membr 99.8 1.3E-19 4.6E-24 187.4 17.4 248 193-537 59-309 (327)
49 2bw4_A Copper-containing nitri 99.8 5.1E-19 1.7E-23 184.3 19.2 260 192-538 59-327 (340)
50 2r7e_B Coagulation factor VIII 99.8 8.2E-21 2.8E-25 215.9 5.7 242 216-534 198-455 (770)
51 1mzy_A Copper-containing nitri 99.8 3.1E-17 1.1E-21 170.2 20.8 260 193-538 53-321 (333)
52 2zoo_A Probable nitrite reduct 99.7 1.6E-16 5.5E-21 171.3 17.8 248 193-538 49-300 (442)
53 1oe1_A Dissimilatory copper-co 99.7 7.6E-16 2.6E-20 160.0 20.3 259 193-538 54-321 (336)
54 3cvb_A Plastocyanin; cupredoxi 99.6 3.2E-17 1.1E-21 140.6 3.0 90 56-149 14-105 (105)
55 2uxt_A Protein SUFI, SUFI; oxi 99.6 1.5E-13 5E-18 148.1 20.9 237 30-296 152-426 (451)
56 2xu9_A Laccase; oxidoreductase 99.5 5.9E-13 2E-17 143.1 20.4 232 30-296 146-425 (439)
57 2cal_A Rusticyanin; iron respi 99.5 6.6E-14 2.2E-18 128.1 9.4 99 45-148 46-154 (154)
58 1hfu_A Laccase 1; oxidoreducta 99.4 1E-11 3.5E-16 135.6 22.6 261 32-297 143-456 (503)
59 1v10_A Laccase; multicopper bl 99.4 7.4E-12 2.5E-16 137.3 21.5 239 50-297 192-477 (521)
60 1iby_A Nitrosocyanin; RED copp 99.4 9.1E-13 3.1E-17 114.1 10.1 105 31-149 2-112 (112)
61 1fwx_A Nitrous oxide reductase 99.3 4.2E-12 1.4E-16 138.7 10.4 94 45-150 497-593 (595)
62 3t6v_A Laccase; beta barrel, o 99.3 3.6E-10 1.2E-14 122.7 23.3 243 49-296 168-456 (495)
63 3zx1_A Oxidoreductase, putativ 99.3 8.1E-11 2.8E-15 127.1 18.0 237 31-296 181-466 (481)
64 1zpu_A Iron transport multicop 99.2 9.6E-10 3.3E-14 120.7 22.7 241 49-297 167-467 (534)
65 2ov0_A Amicyanin; beta-sandwic 99.2 3.5E-11 1.2E-15 102.8 8.6 78 55-148 27-105 (105)
66 3od3_A Blue copper oxidase CUE 99.2 4.4E-10 1.5E-14 121.3 18.8 248 31-296 151-475 (488)
67 1aoz_A Ascorbate oxidase; oxid 99.2 4E-10 1.4E-14 124.5 18.8 227 62-297 205-511 (552)
68 3pxl_A Laccase; 4-copper prote 99.2 1.1E-09 3.7E-14 119.0 21.2 243 49-296 166-456 (499)
69 2q9o_A Laccase-1; multicopper 99.1 1.6E-09 5.5E-14 119.7 20.0 245 49-297 195-507 (559)
70 3aw5_A Multicopper oxidase; be 99.1 8.1E-10 2.8E-14 118.7 16.9 229 31-296 138-434 (448)
71 2gim_A Plastocyanin; beta shee 99.1 1.2E-10 4.2E-15 99.5 7.8 83 60-149 19-106 (106)
72 2aan_A Auracyanin A; cupredoxi 99.1 1.2E-10 4.3E-15 104.6 5.6 94 434-534 36-139 (139)
73 2g23_A PHS, phenoxazinone synt 99.0 4.5E-09 1.5E-13 116.4 19.2 231 50-296 255-576 (612)
74 3abg_A Bilirubin oxidase; clea 99.0 5E-09 1.7E-13 114.9 17.0 231 49-297 201-461 (534)
75 2wsd_A Spore coat protein A; o 99.0 5.5E-09 1.9E-13 114.3 16.7 217 49-296 230-495 (513)
76 3cvb_A Plastocyanin; cupredoxi 99.0 2.1E-10 7.1E-15 97.8 4.1 85 433-534 19-104 (105)
77 2aan_A Auracyanin A; cupredoxi 99.0 2.9E-09 1E-13 95.6 11.0 90 57-148 31-139 (139)
78 1qhq_A Protein (auracyanin); e 98.9 1.4E-08 4.6E-13 91.3 11.4 92 57-149 29-140 (140)
79 3c75_A Amicyanin; copper prote 98.9 5.6E-09 1.9E-13 92.8 8.6 78 55-148 54-132 (132)
80 4hci_A Cupredoxin 1; structura 98.8 7.9E-09 2.7E-13 87.2 8.1 79 55-148 22-100 (100)
81 3sqr_A Laccase; multicopper ox 98.8 5.6E-08 1.9E-12 107.0 16.5 240 193-519 87-330 (580)
82 2plt_A Plastocyanin; electron 98.8 4.5E-09 1.5E-13 88.2 5.2 77 60-148 17-98 (98)
83 1pcs_A Plastocyanin; electron 98.7 4.6E-09 1.6E-13 88.2 3.9 81 60-148 18-98 (98)
84 1bxv_A Plastocyanin; copper pr 98.7 1.8E-08 6.3E-13 83.1 7.2 76 58-148 16-91 (91)
85 3erx_A Pseudoazurin; copper pr 98.7 5.7E-08 1.9E-12 84.9 8.6 76 60-150 20-95 (123)
86 1kdj_A Plastocyanin; electron 98.7 4.6E-08 1.6E-12 82.7 7.7 79 60-148 16-102 (102)
87 1b3i_A PETE protein, protein ( 98.6 6.2E-08 2.1E-12 81.0 7.5 77 60-148 18-97 (97)
88 3tu6_A Pseudoazurin (blue copp 98.6 6.6E-08 2.3E-12 84.9 7.2 77 60-151 22-98 (127)
89 2gim_A Plastocyanin; beta shee 98.6 5.6E-08 1.9E-12 82.7 6.5 85 433-534 20-105 (106)
90 1byp_A Protein (plastocyanin); 98.6 1.6E-07 5.6E-12 78.7 9.2 77 60-148 16-99 (99)
91 1plc_A Plastocyanin; electron 98.6 1.7E-07 5.8E-12 78.7 9.1 77 60-148 16-99 (99)
92 1qhq_A Protein (auracyanin); e 98.6 1E-07 3.4E-12 85.6 7.6 99 434-534 34-139 (140)
93 3ef4_A Pseudoazurin, blue copp 98.5 1.3E-07 4.4E-12 82.5 7.5 76 60-150 21-96 (124)
94 3gyr_A PHS, phenoxazinone synt 98.5 1E-06 3.5E-11 98.5 16.5 92 193-297 459-577 (612)
95 1bxv_A Plastocyanin; copper pr 98.5 3.7E-07 1.3E-11 75.2 8.3 73 433-534 19-91 (91)
96 1pcs_A Plastocyanin; electron 98.5 1.7E-07 5.7E-12 78.5 5.6 80 433-534 19-98 (98)
97 2plt_A Plastocyanin; electron 98.4 3E-07 1E-11 76.9 7.0 81 433-534 18-98 (98)
98 1iby_A Nitrosocyanin; RED copp 98.4 1.4E-06 4.7E-11 74.8 9.7 73 434-534 39-111 (112)
99 1iuz_A Plastocyanin; electron 98.4 4.2E-07 1.4E-11 76.1 5.8 79 58-148 15-98 (98)
100 1paz_A Pseudoazurin precursor; 98.4 1.1E-06 3.6E-11 76.9 8.5 76 60-150 20-95 (123)
101 1pmy_A Pseudoazurin; electron 98.3 1.2E-06 4E-11 76.6 7.7 76 60-150 20-95 (123)
102 4hci_A Cupredoxin 1; structura 98.3 2.7E-06 9.3E-11 71.4 8.9 72 434-534 29-100 (100)
103 1b3i_A PETE protein, protein ( 98.3 3.7E-07 1.3E-11 76.2 3.2 78 434-534 20-97 (97)
104 1cuo_A Protein (azurin ISO-2); 98.3 1.6E-06 5.5E-11 76.3 7.3 92 57-149 14-129 (129)
105 1byp_A Protein (plastocyanin); 98.2 1.3E-06 4.4E-11 73.2 4.2 83 433-534 17-99 (99)
106 3ay2_A Lipid modified azurin p 98.1 2.6E-06 8.8E-11 78.1 6.5 97 52-149 47-167 (167)
107 1id2_A Amicyanin; beta barrel, 98.1 1.4E-05 4.9E-10 67.8 9.9 78 55-148 28-106 (106)
108 2ccw_A Azurin II, AZN-2; elect 98.1 2.4E-05 8.1E-10 68.8 10.7 92 57-149 14-129 (129)
109 1nwp_A Azurin; electron transp 98.0 2.8E-05 9.5E-10 68.2 10.1 91 57-148 14-128 (128)
110 1kdj_A Plastocyanin; electron 98.0 6.6E-06 2.3E-10 69.2 5.8 86 433-534 17-102 (102)
111 2iaa_C Azurin; quinoprotein, t 98.0 3.1E-05 1E-09 67.9 10.1 92 57-149 13-128 (128)
112 3sbq_A Nitrous-oxide reductase 98.0 2.6E-05 8.8E-10 83.7 10.5 89 49-150 546-638 (638)
113 2ux6_A Pseudoazurin; type-1 co 97.9 1.8E-05 6.3E-10 68.8 7.6 75 60-151 20-94 (122)
114 1plc_A Plastocyanin; electron 97.8 1.6E-05 5.6E-10 66.3 5.4 83 433-534 17-99 (99)
115 1fwx_A Nitrous oxide reductase 97.6 0.00017 5.7E-09 79.0 10.6 77 433-536 513-593 (595)
116 2cal_A Rusticyanin; iron respi 97.6 9.3E-05 3.2E-09 67.1 7.2 84 433-534 61-154 (154)
117 2ov0_A Amicyanin; beta-sandwic 97.6 0.00012 4.1E-09 61.8 7.3 72 434-534 34-105 (105)
118 3fsa_A Azurin; copper, cupredo 97.3 0.0012 4E-08 57.1 9.2 88 57-148 14-125 (125)
119 1iuz_A Plastocyanin; electron 97.0 0.0014 4.7E-08 54.4 7.1 81 433-534 18-98 (98)
120 3tu6_A Pseudoazurin (blue copp 96.9 0.0011 3.7E-08 57.9 5.7 75 433-536 23-97 (127)
121 3ef4_A Pseudoazurin, blue copp 96.9 0.0014 4.9E-08 56.8 6.3 75 433-536 22-96 (124)
122 2cua_A Protein (CUA); CUA cent 96.7 0.0054 1.9E-07 54.0 9.0 73 61-149 60-135 (135)
123 3erx_A Pseudoazurin; copper pr 96.7 0.0036 1.2E-07 54.2 7.4 74 433-535 21-94 (123)
124 1id2_A Amicyanin; beta barrel, 96.6 0.004 1.4E-07 52.4 6.7 72 434-534 35-106 (106)
125 3s8f_B Cytochrome C oxidase su 96.5 0.01 3.5E-07 54.2 9.1 83 53-149 85-168 (168)
126 3c75_A Amicyanin; copper prote 96.3 0.0065 2.2E-07 53.3 6.8 73 433-534 60-132 (132)
127 3sbq_A Nitrous-oxide reductase 96.1 0.026 8.8E-07 60.8 10.8 75 433-534 558-636 (638)
128 1paz_A Pseudoazurin precursor; 95.9 0.013 4.3E-07 50.8 6.5 73 434-535 22-94 (123)
129 2cua_A Protein (CUA); CUA cent 95.9 0.038 1.3E-06 48.6 9.6 72 435-534 62-134 (135)
130 1pmy_A Pseudoazurin; electron 95.8 0.011 3.9E-07 51.1 5.6 74 434-536 22-95 (123)
131 2ccw_A Azurin II, AZN-2; elect 95.8 0.014 4.9E-07 50.8 6.2 78 216-294 17-113 (129)
132 3ay2_A Lipid modified azurin p 95.3 0.031 1.1E-06 50.9 6.7 91 434-534 59-166 (167)
133 2ux6_A Pseudoazurin; type-1 co 95.1 0.049 1.7E-06 46.9 7.1 72 433-535 21-92 (122)
134 3fsa_A Azurin; copper, cupredo 94.9 0.015 5E-07 50.2 3.2 79 215-294 16-113 (125)
135 1cuo_A Protein (azurin ISO-2); 94.9 0.076 2.6E-06 46.2 7.8 92 433-534 18-128 (129)
136 3s8f_B Cytochrome C oxidase su 94.9 0.14 4.9E-06 46.5 9.8 72 435-534 95-167 (168)
137 2iaa_C Azurin; quinoprotein, t 92.9 0.27 9.3E-06 42.6 7.5 96 433-534 17-127 (128)
138 1nwp_A Azurin; electron transp 92.5 0.31 1.1E-05 42.2 7.2 96 433-533 18-127 (128)
139 3hb3_B Cytochrome C oxidase su 76.3 4.9 0.00017 39.8 7.0 78 433-538 189-267 (298)
140 3isy_A Bsupi, intracellular pr 76.2 34 0.0012 28.8 12.0 75 47-132 20-100 (120)
141 1cyx_A CYOA; electron transpor 75.4 6.6 0.00023 36.5 7.2 77 433-537 41-119 (205)
142 1yew_A Particulate methane mon 74.4 4.3 0.00015 40.8 5.9 70 47-122 250-336 (382)
143 3isy_A Bsupi, intracellular pr 69.7 28 0.00095 29.4 9.2 72 223-296 16-102 (120)
144 2gsm_B Cytochrome C oxidase su 67.9 9.7 0.00033 37.0 6.8 77 433-537 171-248 (262)
145 1cyx_A CYOA; electron transpor 67.0 11 0.00037 35.1 6.6 74 61-148 41-115 (205)
146 1v54_B Cytochrome C oxidase po 59.5 14 0.00048 35.0 6.1 77 433-537 140-217 (227)
147 1xwv_A DER F II; beta sheets, 52.3 18 0.00062 30.9 5.1 70 52-121 16-93 (129)
148 2r39_A FIXG-related protein; s 52.0 46 0.0016 27.6 7.6 46 226-281 34-81 (118)
149 3hb3_B Cytochrome C oxidase su 50.8 30 0.001 34.1 7.0 76 61-150 189-265 (298)
150 3rfr_A PMOB; membrane, oxidore 50.8 64 0.0022 32.8 9.3 93 47-146 284-410 (419)
151 1nep_A EPV20, BNPC2, epididyma 50.3 18 0.00063 30.8 4.8 69 52-121 18-95 (130)
152 2gsm_B Cytochrome C oxidase su 50.2 33 0.0011 33.1 7.1 76 61-150 171-247 (262)
153 1fft_B Ubiquinol oxidase; elec 46.9 19 0.00066 35.8 4.9 77 433-537 151-229 (315)
154 1x9u_A Umecyanin; cupredoxin, 43.2 19 0.00066 30.1 3.7 35 116-151 72-107 (116)
155 2f1e_A Protein APAG; APAG prot 38.9 22 0.00074 30.4 3.3 47 72-118 34-86 (127)
156 1v54_B Cytochrome C oxidase po 36.6 46 0.0016 31.4 5.6 75 61-149 140-215 (227)
157 3j0f_E E1 envelope glycoprotei 36.3 67 0.0023 32.2 6.7 28 492-519 307-334 (439)
158 1xvs_A Protein APAG; MCSG APC2 35.9 22 0.00076 30.3 2.9 47 72-118 33-85 (126)
159 1xq4_A Protein APAG; all beta 33.6 30 0.001 30.0 3.4 47 72-118 38-90 (139)
160 2h7w_A Chagasin; beta-strands, 29.7 2.3E+02 0.0078 24.0 8.4 65 60-127 32-104 (131)
161 1tza_A APAG protein, SOR45; st 29.3 27 0.00092 30.1 2.3 21 98-118 65-85 (134)
162 3j0c_A E1 envelope glycoprotei 29.0 45 0.0015 33.5 4.1 23 497-519 312-334 (442)
163 1ws8_A Mavicyanin; oxidized fo 26.3 59 0.002 26.8 3.9 37 115-152 71-107 (109)
164 2hj1_A Hypothetical protein; s 25.4 35 0.0012 27.6 2.2 24 50-73 59-82 (97)
165 1x9u_A Umecyanin; cupredoxin, 24.2 61 0.0021 27.0 3.6 34 504-537 73-107 (116)
166 3rpf_C Molybdopterin convertin 23.4 46 0.0016 25.0 2.5 25 49-73 42-67 (74)
167 3idu_A Uncharacterized protein 22.9 3.4E+02 0.012 22.8 9.7 69 220-298 28-99 (127)
168 1fft_B Ubiquinol oxidase; elec 22.8 65 0.0022 32.0 4.1 74 61-148 151-225 (315)
169 2wtp_A ORF131 protein, CZCE; m 22.6 26 0.00089 29.9 1.0 20 217-236 71-90 (131)
170 2p9r_A Alpha-2-M, alpha-2-macr 22.4 44 0.0015 26.7 2.4 70 221-295 13-84 (102)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=2.8e-102 Score=863.07 Aligned_cols=507 Identities=27% Similarity=0.506 Sum_probs=402.7
Q ss_pred CceEEEEEEEEEEEeCCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCCCCCCCCC-CC
Q 007635 28 DDTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-TN 105 (595)
Q Consensus 28 ~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq 105 (595)
+.+|+|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||++|.+++|+||+++ ||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 35899999999999999999999999999999999999999999999999998 99999999999999999999998 99
Q ss_pred CccCCCCeEEEEEEecCceeeeEEeccchhhhccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHHHHHHHhc
Q 007635 106 CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDS 185 (595)
Q Consensus 106 ~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~ 185 (595)
|+|+||++|+|+|++ +++||||||||.+.|+.+||+|+|||++++....++ .+|+|++|+|+||++++...+...+..
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999999 799999999999999999999999999986555555 457899999999999877655433332
Q ss_pred C--CCCCCCceEEEccCCCCCCCC-----------ccC-CCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCcccee
Q 007635 186 G--KDLDMPDGVLINGKGPYRYNT-----------TLV-PDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLL 251 (595)
Q Consensus 186 ~--~~~~~~d~~liNG~~~~~~~~-----------~~~-~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v 251 (595)
. ...+.++.++|||+..++|.. +.. ...+..+.++|++||+|||||||+|..+.+.|+|+||+|+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v 238 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV 238 (552)
T ss_dssp SSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE
T ss_pred ccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE
Confidence 1 222467899999999876632 111 11223458999999999999999999999999999999999
Q ss_pred eeccCccccceeecEEEEcCCcEEEEEEEcC-CCCCcceEEEEeeecccccccccceeEEEEEecCCCCC--CCCCCCCC
Q 007635 252 VETEGHYTSQQNYTSFEIHVGQSYSFLVTMD-QNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGA--ASGPLPEA 328 (595)
Q Consensus 252 i~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~-~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~--~~~~~p~~ 328 (595)
|++||.+++|+.++++.|+|||||||+|+++ +.+| +|||++....+.. ......++|+|.++... +..+.|.
T Consensus 239 i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g-~y~i~~~~~~~~~---~~~~~~ail~y~~~~~~~~p~~~~p~- 313 (552)
T 1aoz_A 239 VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSE-NYWVSVGTRARHP---NTPPGLTLLNYLPNSVSKLPTSPPPQ- 313 (552)
T ss_dssp EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTC-CEEEEEEEESSCC---CSCCEEEEEEETTSCTTSCCSSCCCC-
T ss_pred EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCC-CEEEEEEcccCCC---CCccEEEEEEECCCCCCCCCCCCCCC-
Confidence 9999999999999999999999999999994 4567 9999998764321 23567899999876421 1112222
Q ss_pred CCCCCccccccCccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhc
Q 007635 329 PSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADK 408 (595)
Q Consensus 329 ~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~ 408 (595)
.|.+++....... .+. .+....+.+.| ..+++++.+..... ..++..+|+|||++|..|..|+|.+.+
T Consensus 314 ~p~~~~~~~~~~~--~l~-~l~~~~~~~~~--------~~~~~~~~l~~~~~-~~~~~~~w~iNg~s~~~p~~P~L~~~~ 381 (552)
T 1aoz_A 314 TPAWDDFDRSKNF--TYR-ITAAMGSPKPP--------VKFNRRIFLLNTQN-VINGYVKWAINDVSLALPPTPYLGAMK 381 (552)
T ss_dssp CCCTTCHHHHHHH--HTT-CCBCTTCCCCC--------SSCSEEEEEEEEEE-EETTEEEEEETTEEECCCSSCHHHHHH
T ss_pred CCccccccccccc--ccc-ccccCCCCCCC--------CCCcEEEEEEEeec-cCCCeEEEEECCCccCCCCCCHHHHHh
Confidence 2211111110000 000 01100011111 24567777765321 234567899999999999999998877
Q ss_pred ccCCCcccCCCCCCC-----------CCCCCCCceeeeeecCCcEEEEEEecCC------CCceeeeecCceEEEEeecc
Q 007635 409 YNVKGAYKLDFPNKP-----------LTRPPRTDRSLINATYKGFIEIILQNND------TKMQSFHMDGYSFFVVGMDF 471 (595)
Q Consensus 409 ~~~~g~~~~~~~~~p-----------~~~~~~~~~~v~~~~~g~~ve~vl~N~~------~~~HP~HlHG~~F~Vv~~~~ 471 (595)
+++++.|+.+++..+ .+...+.++.++.++.|++|||+|+|.+ ...||||||||+||||+++.
T Consensus 382 ~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~ 461 (552)
T 1aoz_A 382 YNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGD 461 (552)
T ss_dssp TTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEE
T ss_pred hcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEeccc
Confidence 777777664433211 1123345678899999999999999987 34699999999999999998
Q ss_pred cccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceeeeeeeccccceeccceeEEEEeCCCCCCCCCCCCCCCcc
Q 007635 472 GIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEENGDTEMGPPDNVL 551 (595)
Q Consensus 472 G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~~~~~~~~~~P~~~~ 551 (595)
|.|++.....+|+.+|+|||||.|+++||++|||+|||||.|+|||||++|++.|||+.|.+... + ..++|++++
T Consensus 462 G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-~----~~~~P~~~~ 536 (552)
T 1aoz_A 462 GKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-K----VGRIPTKAL 536 (552)
T ss_dssp SSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-G----CCCCCHHHH
T ss_pred CccCcccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-h----hccCCcchh
Confidence 99987556679999999999999999999999999999999999999999999999999977532 2 256899999
Q ss_pred ccccccc
Q 007635 552 YCGALQS 558 (595)
Q Consensus 552 ~cg~~~~ 558 (595)
.|+.++.
T Consensus 537 ~C~~~~~ 543 (552)
T 1aoz_A 537 ACGGTAK 543 (552)
T ss_dssp SSHHHHH
T ss_pred hhhccCc
Confidence 9998864
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=3.7e-99 Score=832.10 Aligned_cols=488 Identities=21% Similarity=0.302 Sum_probs=384.3
Q ss_pred CceEEEEEEEEEEEeCCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCCCCCCCCC-CC
Q 007635 28 DDTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-TN 105 (595)
Q Consensus 28 ~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq 105 (595)
+++|+|+|++++.++++||+++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++||||+++ ||
T Consensus 65 ~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq 144 (580)
T 3sqr_A 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144 (580)
T ss_dssp CCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTB
T ss_pred ceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcccc
Confidence 45899999999999999999999999999999999999999999999999998 89999999999999999999999 99
Q ss_pred CccCCCCeEEEEEEecCceeeeEEeccchhhhccCccccEEEccCCCCCCCCCCCCCce-eEeeeecccccHHHHHHHHh
Q 007635 106 CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFDQPEGDI-IFLIGDWYTRNHTALRTALD 184 (595)
Q Consensus 106 ~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~~~~~~~ 184 (595)
|||+||++|+|+|++ +|+||||||||.+.|+.+||+|+|||+++.. .+ +|.|+ +|+|+||+++...++.....
T Consensus 145 ~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~--~~---yD~d~~~l~l~Dw~~~~~~~~~~~~~ 218 (580)
T 3sqr_A 145 CPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPAT--AD---YDEDVGVIFLQDWAHESVFEIWDTAR 218 (580)
T ss_dssp CCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCS--SC---CSEEEEEEEEEEECSSCHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCccc--CC---CCccceEEEEEEEecCCHHHHHHHHh
Confidence 999999999999999 5899999999999999999999999998754 23 48887 99999999998777654443
Q ss_pred cCCCCCCCceEEEccCCCCCCCCcc---CCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccc
Q 007635 185 SGKDLDMPDGVLINGKGPYRYNTTL---VPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQ 261 (595)
Q Consensus 185 ~~~~~~~~d~~liNG~~~~~~~~~~---~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p 261 (595)
. ...+.+|+++|||++.++|.... +...+..+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 219 ~-~~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P 297 (580)
T 3sqr_A 219 L-GAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297 (580)
T ss_dssp T-SCCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEE
T ss_pred c-cCCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCc
Confidence 3 23577899999999988774221 1123346899999999999999999999999999999999999999999999
Q ss_pred eeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCc
Q 007635 262 QNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQ 341 (595)
Q Consensus 262 ~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~ 341 (595)
+.+++|.|+|||||||+|++++.+| +|||++...........+...+|||+|.++.. ..|. .+.+...+.+.+.
T Consensus 298 ~~~~~l~i~pGqRydVlv~a~~~~g-~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~----~~P~-~~~~~~~~~~~~~ 371 (580)
T 3sqr_A 298 YTTDTLLIGIGQRYDVIVEANAAAD-NYWIRGNWGTTCSTNNEAANATGILRYDSSSI----ANPT-SVGTTPRGTCEDE 371 (580)
T ss_dssp EEESSEEECTTCEEEEEEECCSCSS-EEEEECCCCTTTSCBTTGGGCEEEEESSTTCC----CCCC-CCCCCCCCCSCCS
T ss_pred eEeeEEEEccceEEEEEEEeCCCCC-eEEEEEecccccCccCCCCceEEEEEECCCCC----CCCC-CCCCCccchhhcc
Confidence 9999999999999999999998888 99999987543211123357899999987542 1122 1110110001110
Q ss_pred cccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeecc-CCCChhhhhhcccCCCcccCCCC
Q 007635 342 PRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFV-KPETPIRLADKYNVKGAYKLDFP 420 (595)
Q Consensus 342 ~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~-~p~~P~l~~~~~~~~g~~~~~~~ 420 (595)
...+|.+..+.+.|. ..+.++.+.. ..++..+|+|||++|. +++.|+|+..+. |. .
T Consensus 372 ---~~~~L~P~~~~~~~~--------~~~~~~~l~~----~~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~-----~ 428 (580)
T 3sqr_A 372 ---PVASLVPHLALDVGG--------YSLVDEQVSS----AFTNYFTWTINSSSLLLDWSSPTTLKIFN---NE-----T 428 (580)
T ss_dssp ---CGGGCCBSSCCBCCS--------EEEEEEEEEE----EESSSEEEEETTBCCCCCTTSCHHHHHHT---TC-----C
T ss_pred ---cccccccCCCCCCCC--------ccceEEEEEe----ccCCceeEEECCEecccCCCCCchhhhhc---CC-----c
Confidence 002233322222221 2233333332 1345678999999997 578898876532 21 1
Q ss_pred CCCCCCCCCCceeeeeec----CCcEEEEEEecCC--CCceeeeecCceEEEEeecccccCCCC-CCCCCcCCCCcccEE
Q 007635 421 NKPLTRPPRTDRSLINAT----YKGFIEIILQNND--TKMQSFHMDGYSFFVVGMDFGIWTESN-RNSYNKWDAISKCTT 493 (595)
Q Consensus 421 ~~p~~~~~~~~~~v~~~~----~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vv~~~~G~~~~~~-~~~~n~~~p~~RDTv 493 (595)
+.|. ..+++.++ .|++|||+|+|.+ .+.||||||||+||||++|.|.|+++. +..||++||++|||+
T Consensus 429 ~~~~------~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv 502 (580)
T 3sqr_A 429 IFPT------EYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVA 502 (580)
T ss_dssp CCCG------GGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEE
T ss_pred cCCC------CcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEE
Confidence 1111 23455554 6999999999988 789999999999999999999998754 467999999999999
Q ss_pred EECCCcEEEEEEEeCCceeeeeeeccccceeccceeEEEEeCCCCCCCCCCCCCCC-cccccccccC
Q 007635 494 EVYPGAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEENGDTEMGPPDN-VLYCGALQSK 559 (595)
Q Consensus 494 ~v~p~g~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~~~~~~~~~~P~~-~~~cg~~~~~ 559 (595)
.|+++||++|||++||||+|+|||||+.|.+.||+++|.+. +++.. ...++|++ ...|..+...
T Consensus 503 ~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~-~~~i~-~~~~~~~~~~~~C~~~~~~ 567 (580)
T 3sqr_A 503 ALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVES-QSSIA-VKMTDTAIFEDTCANWNAY 567 (580)
T ss_dssp EECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEES-GGGCC-CCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEEC-HHHHh-hccCCcHHHHHhhHHHhhh
Confidence 99999999999999999999999999999999999988764 44432 21235666 4578777654
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-97 Score=819.30 Aligned_cols=484 Identities=19% Similarity=0.276 Sum_probs=379.9
Q ss_pred ceEEEEEEEEEEEeCCCC-eeEEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCCCCCCCCC-CC
Q 007635 29 DTIFYDFKVSYITASPLG-VPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-TN 105 (595)
Q Consensus 29 ~~~~~~~~v~~~~~~~dG-~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-tq 105 (595)
++|+|+|+|++..+++|| .++++|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||++|.+++||||+++ ||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 7999999999999999999999999999999998 99999999999999999999998 99
Q ss_pred CccCCCCeEEEEEEecCceeeeEEeccchhhhccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHHHHHH-Hh
Q 007635 106 CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTA-LD 184 (595)
Q Consensus 106 ~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~-~~ 184 (595)
|||+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.. |+ .+|+|++|+|+||+++...++... +.
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999976999999999999999999999999999753 33 458999999999999987776443 22
Q ss_pred c---CCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccc
Q 007635 185 S---GKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQ 261 (595)
Q Consensus 185 ~---~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p 261 (595)
. ...++.++.+||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~--------------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P 222 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN--------------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEK 222 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS--------------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred cccCCCCCCCCceEEECCCCc--------------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccc
Confidence 1 23456789999999985 899999999999999999999999999999999999999999999
Q ss_pred eeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeeccc-c--cccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccc
Q 007635 262 QNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVN-E--SFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAA 338 (595)
Q Consensus 262 ~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~-~--~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~ 338 (595)
..+++|.|+|||||||+|++++.++++|||++...... . .........++|+|.++... |. .+.......+
T Consensus 223 ~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~-----p~-~~~~~~~~~~ 296 (534)
T 1zpu_A 223 NVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAAL-----PT-QNYVDSIDNF 296 (534)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCB-----CC-CCCCSCSSCS
T ss_pred cEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCC-----CC-CCcccccccc
Confidence 99999999999999999999875434999998765321 0 01124567899999875421 11 1100010000
Q ss_pred cCccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCC
Q 007635 339 MTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLD 418 (595)
Q Consensus 339 ~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~ 418 (595)
++. ..+.+....+.+ ..+++++.+........++..+|+|||++|..|++|+|+..+.. +.+.
T Consensus 297 ~~~-----~~l~p~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~-- 359 (534)
T 1zpu_A 297 LDD-----FYLQPYEKEAIY--------GEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQA-- 359 (534)
T ss_dssp CCG-----GGCCBSSCCCCC--------CSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGT--
T ss_pred ccc-----ccceeCCCCCCC--------CCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--Cccc--
Confidence 111 112211111111 23456776665322123566789999999999999988765431 1111
Q ss_pred CCCCCCCCCCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeeccc----------ccCCCCCCCCCcCCCC
Q 007635 419 FPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFG----------IWTESNRNSYNKWDAI 488 (595)
Q Consensus 419 ~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G----------~~~~~~~~~~n~~~p~ 488 (595)
..+... ..++.++.++.|++|||+|+|.+.+.||||||||+|+||+++.+ .|++..+..+ ..+|+
T Consensus 360 --~~~~~~--~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~-~~~p~ 434 (534)
T 1zpu_A 360 --NNSEIY--GSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAF-PEYPM 434 (534)
T ss_dssp --TCGGGG--CSSSCEEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCC-CSSCE
T ss_pred --CCCccc--CCCceEEEeCCCCEEEEEEeCCCCCCCCeEecCCceEEEeecCCccccccCcccccCccccccc-cCCCC
Confidence 111111 11356788999999999999999899999999999999999864 4554432233 46899
Q ss_pred cccEEEECCCcEEEEEEEeCCceeeeeeeccccceeccceeEEEEeCCCCCCCCC--CCCCCCcccccccccCc
Q 007635 489 SKCTTEVYPGAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEENGDTE--MGPPDNVLYCGALQSKQ 560 (595)
Q Consensus 489 ~RDTv~v~p~g~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~~~~~~~--~~~P~~~~~cg~~~~~~ 560 (595)
|||||.|+|++|++|||++||||.|+|||||++|++.|||+.|.+.. ++. +.+ .++|++...||...+.+
T Consensus 435 ~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~-~~~-~~~~~~~~p~~~~~~C~~~~~~ 506 (534)
T 1zpu_A 435 RRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDP-FGI-QDAHSQQLSENHLEVCQSCSVA 506 (534)
T ss_dssp EESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH-HHH-HHCGGGSCCHHHHHHHHHTTCC
T ss_pred eeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECc-ccc-ccccccCCChhHhhhhhccCCC
Confidence 99999999999999999999999999999999999999999997753 322 122 56787777666655543
No 4
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=9.5e-97 Score=803.92 Aligned_cols=479 Identities=24% Similarity=0.381 Sum_probs=371.7
Q ss_pred EEEEEEEEEEEeCCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCC-----CceeecCCCccCCCCCCCCCCC-C
Q 007635 31 IFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDE-----SLLMTWPGIQMRRNSWQDGVQG-T 104 (595)
Q Consensus 31 ~~~~~~v~~~~~~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~-t 104 (595)
.+|+|+|++..+++||+.|.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|++++||||+++ |
T Consensus 4 ~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 83 (499)
T 3pxl_A 4 PVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFIN 83 (499)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred ceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 589999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCccCCCCeEEEEEEecCceeeeEEeccchhhhccCccccEEEccCCCC-CCCCCCCCCceeEeeeecccccHHHHHHHH
Q 007635 105 NCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVI-PIPFDQPEGDIIFLIGDWYTRNHTALRTAL 183 (595)
Q Consensus 105 q~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 183 (595)
||||+||++|+|+|++++|+||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....
T Consensus 84 q~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~----- 158 (499)
T 3pxl_A 84 QCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL----- 158 (499)
T ss_dssp BCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT-----
T ss_pred cCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc-----
Confidence 9999999999999999889999999999999999999999999986541 2234333567899999999985432
Q ss_pred hcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCcccccee
Q 007635 184 DSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQN 263 (595)
Q Consensus 184 ~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~ 263 (595)
.+..+..+|+++|||++++.|. .....+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|..
T Consensus 159 -~~~~p~~~d~~liNG~~~~~~~-----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~ 232 (499)
T 3pxl_A 159 -GPRFPGGADATLINGKGRAPSD-----SVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232 (499)
T ss_dssp -SCSSCSSCSEEEETTBCCCTTC-----TTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCCCcCCCC-----CCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceE
Confidence 1223347899999999887652 1234689999999999999999999999999999999999999999999999
Q ss_pred ecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccc
Q 007635 264 YTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPR 343 (595)
Q Consensus 264 ~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~ 343 (595)
+++|.|+|||||||+|++++.+| +|||++........ ..+....|+|+|.++....+. .+. .+.... +.
T Consensus 233 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~p~-~~~-~~~~~~----~~--- 301 (499)
T 3pxl_A 233 VDSIQIFAAQRYSFVLDANQAVD-NYWIRANPNFGNVG-FDGGINSAILRYDGAPAVEPT-TNQ-TTSVKP----LN--- 301 (499)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSCCC-CCC-CCCSSB----CC---
T ss_pred eeeEEECCCcEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEeCCCCCCCCC-CCC-CCCCcc----cc---
Confidence 99999999999999999998778 99999976532221 122345799999875421110 000 010000 00
Q ss_pred cccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCC
Q 007635 344 SIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKP 423 (595)
Q Consensus 344 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p 423 (595)
+.+|.+....+.|... ....+++++.+... .++ .+|+|||++|..|+.|+|++.+. +.+.. .+
T Consensus 302 --~~~L~p~~~~~~p~~~---~~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~--~~-- 364 (499)
T 3pxl_A 302 --EVDLHPLVSTPVPGAP---SSGGVDKAINMAFN----FNG-SNFFINGASFVPPTVPVLLQILS---GAQTA--QD-- 364 (499)
T ss_dssp --GGGCCBSSCCCCSSCS---STTCSSEEEECCEE----ECS-SCEEETTBCCCCCSSCHHHHHHT---TCCST--TT--
T ss_pred --cccccccccccCCCcc---cCCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCchhhhhhc---CCccc--cc--
Confidence 1123322211111100 01134566665542 222 27999999999999999876643 22211 00
Q ss_pred CCCCCCCceeeeeecCCcEEEEEEe---cCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECC---
Q 007635 424 LTRPPRTDRSLINATYKGFIEIILQ---NNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYP--- 497 (595)
Q Consensus 424 ~~~~~~~~~~v~~~~~g~~ve~vl~---N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p--- 497 (595)
......++.++.|++|||+|+ |.....||||||||+|+||+++ | ...+|+.||+||||+.|++
T Consensus 365 ----~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~-g------~~~~n~~~P~~rDtv~v~~~~p 433 (499)
T 3pxl_A 365 ----LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA-G------STVYNYDNPIFRDVVSTGTPAA 433 (499)
T ss_dssp ----SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECT-T------CCCCCSSSCCEESEEECCCGGG
T ss_pred ----cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEecc-C------CcccccCCCCccceEEcCCcCC
Confidence 011346788999999999999 5667889999999999999874 2 2358899999999999997
Q ss_pred CcEEEEEEEeCCceeeeeeeccccceeccceeEEEEeCCCCCCCCCCCCCCC-cccccccccCcc
Q 007635 498 GAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEENGDTEMGPPDN-VLYCGALQSKQK 561 (595)
Q Consensus 498 ~g~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~~~~~~~~~~P~~-~~~cg~~~~~~~ 561 (595)
++|++|||++||||.|+|||||++|++.||+++| ++.+++..+ ..++|++ ...|..+...++
T Consensus 434 g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~~-~~~~p~~~~~~C~~~~~~~~ 496 (499)
T 3pxl_A 434 GDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVM-AEDTPDVKA-VNPVPQAWSDLCPTYDALDP 496 (499)
T ss_dssp TCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEE-EESGGGHHH-HSCCCHHHHTHHHHHHTSCG
T ss_pred CcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEE-EEChhHhcc-ccCCCHHHHHhhhHhhccCc
Confidence 9999999999999999999999999999998887 555655422 2345665 558887776554
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=6.2e-97 Score=805.46 Aligned_cols=478 Identities=23% Similarity=0.352 Sum_probs=368.0
Q ss_pred EEEEEEEEEEEeCCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCC-----CceeecCCCccCCCCCCCCCCC-C
Q 007635 31 IFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDE-----SLLMTWPGIQMRRNSWQDGVQG-T 104 (595)
Q Consensus 31 ~~~~~~v~~~~~~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~-----~~siH~HG~~~~~~~~~DGv~~-t 104 (595)
..|+|+|++..++|||++|.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||++|++++||||+++ |
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 489999999999999999999999999999999999999999999999985 7999999999999999999998 9
Q ss_pred CCccCCCCeEEEEEEecCceeeeEEeccchhhhccCccccEEEccCCCC-CCCCCCCCCceeEeeeecccccHHHHHHHH
Q 007635 105 NCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVI-PIPFDQPEGDIIFLIGDWYTRNHTALRTAL 183 (595)
Q Consensus 105 q~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 183 (595)
||||+||++|+|+|++++|+||||||||.+.|+.+||+|+|||+++.+. ..+|+..++|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999889999999999999999999999999986541 22343335678999999999865432
Q ss_pred hcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCcccccee
Q 007635 184 DSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQN 263 (595)
Q Consensus 184 ~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~ 263 (595)
.+..+..+|+++|||++++.|.. .....+.++|++||+|||||||+|..+.+.|+|+||+|+||++||.+++|+.
T Consensus 161 -~~~~p~~~d~~liNG~g~~~~~~----~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~ 235 (495)
T 3t6v_A 161 -GAGGAITADSTLIDGLGRTHVNV----AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELT 235 (495)
T ss_dssp -CSSSCCCCSEEEETTBCCBSSSC----CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEE
T ss_pred -ccCCCCCCcEEEECCcCcCCCCc----ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEE
Confidence 12233478999999998765522 1234689999999999999999999999999999999999999999999999
Q ss_pred ecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccc
Q 007635 264 YTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPR 343 (595)
Q Consensus 264 ~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~ 343 (595)
+++|.|+|||||||+|++++.+| +|||++........ ..+....|||+|.++.... +... .+.... ...
T Consensus 236 ~~~l~i~pGqR~dvlv~~~~~~g-~y~i~a~~~~~~~~-~~~~~~~ail~Y~~~~~~~--p~~~-~~~~~~-----~~~- 304 (495)
T 3t6v_A 236 VDEIQIFAAQRYSFVLNANQPVG-NYWIRANPNSGGEG-FDGGINSAILRYDGATTAD--PVTV-ASTVHT-----KCL- 304 (495)
T ss_dssp ESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTSCSSC--CCCC-CCSSCS-----SBC-
T ss_pred eeeEEEcCceEEEEEEECCCCCc-eEEEEEecccCccc-cCCCceEEEEEECCCCCCC--CCCC-CCCCCc-----ccc-
Confidence 99999999999999999998778 99999986533221 1223457999998754211 1100 000000 000
Q ss_pred cccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCC
Q 007635 344 SIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKP 423 (595)
Q Consensus 344 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p 423 (595)
.+.+|.+....+.|.. . ....+++++.+... .++ .+|+|||++|..++.|+|++... +.+.. .+
T Consensus 305 -~~~~L~p~~~~~~p~~-~--~~~~~d~~~~l~~~----~~~-~~w~iNg~s~~~~~~P~L~~~~~---g~~~~--~~-- 368 (495)
T 3t6v_A 305 -IETDLHPLSRNGVPGN-P--HQGGADCNLNLSLG----FAC-GNFVINGVSFTPPTVPVLLQICS---GANTA--AD-- 368 (495)
T ss_dssp -CGGGCCBSSCCCCSSC-S--STTCSSEEEECCEE----EET-TEEEETTBCCCCCSSCHHHHHHT---TCCSS--TT--
T ss_pred -ccccccccccccCCCc-c--CCCCCcEEEEEEEE----ecC-cEEEEcCEecCCCCCcchhhhhc---CCcCc--cc--
Confidence 0112332221111110 0 01134556655432 122 27999999999999998877643 22211 00
Q ss_pred CCCCCCCceeeeeecCCcEEEEEEe-cCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECC-CcEE
Q 007635 424 LTRPPRTDRSLINATYKGFIEIILQ-NNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYP-GAWT 501 (595)
Q Consensus 424 ~~~~~~~~~~v~~~~~g~~ve~vl~-N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p-~g~~ 501 (595)
......++.++.|++|||+|+ |.....||||||||+|+||+++ | ...+|+.+|+||||+.|++ |+|+
T Consensus 369 ----~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~-g------~~~~n~~~P~~rDtv~v~~~g~~~ 437 (495)
T 3t6v_A 369 ----LLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESA-S------NSTSNYDDPIWRDVVSIGGVGDNV 437 (495)
T ss_dssp ----SSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECT-T------CCCCCSSSCCEESEEECCSTTCEE
T ss_pred ----ccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecC-C------CCCcccCCCCCccEEEcCCCCcEE
Confidence 011346788999999999998 6677899999999999999874 2 2358899999999999997 8999
Q ss_pred EEEEEeCCceeeeeeeccccceeccceeEEEEeCCCCCCCCCCCCCCC-cccccccc
Q 007635 502 AILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEENGDTEMGPPDN-VLYCGALQ 557 (595)
Q Consensus 502 ~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~~~~~~~~~~P~~-~~~cg~~~ 557 (595)
+|||++||||.|+|||||++|++.||+++| ++.+++.. ...++|++ ...|..+.
T Consensus 438 ~irf~adnPG~W~~HCHi~~H~~~Gm~~~~-~e~~~~~~-~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 438 TIRFCTDNPGPWFLHCHIDWHLDAGFAIVF-AEDIPNTA-SANPVPEAWSNLCPSYD 492 (495)
T ss_dssp EEEEECCSCEEEEEEESCHHHHHTTCEEEE-EETHHHHH-HHCCCCHHHHHHHHHHH
T ss_pred EEEEEcCCCeeEEEEecchhHhhcCCeEEE-EEChhHhc-cccCCCHHHHHHhhHhh
Confidence 999999999999999999999999999888 45555432 12345666 45676543
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.7e-95 Score=802.27 Aligned_cols=484 Identities=21% Similarity=0.309 Sum_probs=372.4
Q ss_pred CceEEEEEEEEEEEeCCCCe-eEEEEEECCCCCCceEEecCCCEEEEEEEeCCC-----CCceeecCCCccCCCCCCCCC
Q 007635 28 DDTIFYDFKVSYITASPLGV-PQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-----ESLLMTWPGIQMRRNSWQDGV 101 (595)
Q Consensus 28 ~~~~~~~~~v~~~~~~~dG~-~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DGv 101 (595)
+..++|+|++++..+++||+ ++++|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+
T Consensus 21 ~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv 100 (521)
T 1v10_A 21 AATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGP 100 (521)
T ss_dssp -CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCC
T ss_pred ccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCC
Confidence 45678999999999999999 999999999999999999999999999999999 999999999999999999999
Q ss_pred CC-CCCccCCCCeEEEEEEecCceeeeEEeccchhhhccCccccEEEccCCCC-CCCCCCCCCceeEeeeecccccHHHH
Q 007635 102 QG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVI-PIPFDQPEGDIIFLIGDWYTRNHTAL 179 (595)
Q Consensus 102 ~~-tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~ 179 (595)
++ |||+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. +.+|+..++|++|+|+||+++...++
T Consensus 101 ~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~~ 180 (521)
T 1v10_A 101 AFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVL 180 (521)
T ss_dssp BTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC--
T ss_pred cceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHHH
Confidence 98 99999999999999997788999999999999999999999999987531 22343334699999999999876654
Q ss_pred HHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccc
Q 007635 180 RTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT 259 (595)
Q Consensus 180 ~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~ 259 (595)
.. ..+...+.+|.++|||++.+.|.. .....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 181 ~~--~~~~~~~~~d~~liNG~~~~~~~~----~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 254 (521)
T 1v10_A 181 FP--NPNKAPPAPDTTLINGLGRNSANP----SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSH 254 (521)
T ss_dssp -------CCCSCCSEEEETTBCCCSSCG----GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE
T ss_pred hh--ccCCCCCCCCEEEECCcccCCCCC----CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccc
Confidence 32 122335678999999999866521 123358999999999999999999999999999999999999999999
Q ss_pred cceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCcccccc
Q 007635 260 SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAM 339 (595)
Q Consensus 260 ~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~ 339 (595)
+|+.++++.|+|||||||+|++++.+| +|||++........ .......++|+|.+..... |. .+..... .+
T Consensus 255 ~p~~~~~l~l~pgqR~dvlv~~~~~~g-~y~i~~~~~~~~~~-~~~~~~~ail~y~~~~~~~----p~-~~~~~~~--~~ 325 (521)
T 1v10_A 255 QPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGRNG-FTGGINSAIFRYQGAAVAE----PT-TSQNSGT--AL 325 (521)
T ss_dssp EEEEESBEEECTTCEEEEEEECCSCSS-EEEEEEEESSSSCS-CGGGTTEEEEEETTCCSCC----CC-CCCCCSC--BC
T ss_pred cceeeeeEEEcccceEEEEEEcCCCCC-ceeeeecccccccc-CCCCceeEEEEECCCCCCC----CC-CCCCccc--cc
Confidence 999999999999999999999998777 99999976532111 1112346999998754211 11 1100000 01
Q ss_pred CccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCe-EEEEecCeeccCCCChhhhhhcccCCCcccCC
Q 007635 340 TQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGK-VRSTLNGISFVKPETPIRLADKYNVKGAYKLD 418 (595)
Q Consensus 340 ~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~-~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~ 418 (595)
+ +.++.+....+.|.... ....++++.+... .++. .+|+|||++|..+..|++++.+. +.+...
T Consensus 326 ~-----~~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~----~~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~~~ 390 (521)
T 1v10_A 326 N-----EANLIPLINPGAPGNPV---PGGADINLNLRIG----RNATTADFTINGAPFIPPTVPVLLQILS---GVTNPN 390 (521)
T ss_dssp C-----GGGCCBSSCCCCSSCSS---TTCSSEEEECCEE----CCSSSSCCEESSCCCCCCSSCHHHHHHH---TCCCGG
T ss_pred c-----hhhcccCCcccCCCccc---CCcceEEEEEEEe----cCCceeEEEECCCcccCCCCchhhhhhc---CCcccc
Confidence 1 01222221112221100 0123455554431 1232 37999999999888898776542 221100
Q ss_pred CCCCCCCCCCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEE-CC
Q 007635 419 FPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEV-YP 497 (595)
Q Consensus 419 ~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v-~p 497 (595)
....++.++.++.|++|||+++| .+.||||||||+|+||+++.+. .+|+.+|+|||||.| +|
T Consensus 391 --------~~~~~~~~~~v~~g~~vei~l~N--~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~ 453 (521)
T 1v10_A 391 --------DLLPGGAVISLPANQVIEISIPG--GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGG 453 (521)
T ss_dssp --------GSSSTTTEEEECTTCEEEEEEEC--CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBS
T ss_pred --------cCCCCceEEEecCCCEEEEEEcC--CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCC
Confidence 01124577889999999999999 7899999999999999997552 378889999999999 89
Q ss_pred CcEEEEEEEeCCceeeeeeeccccceeccceeEEEEeCCCCCCCCCCCCCC-CcccccccccCc
Q 007635 498 GAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEENGDTEMGPPD-NVLYCGALQSKQ 560 (595)
Q Consensus 498 ~g~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~~~~~~~~~~P~-~~~~cg~~~~~~ 560 (595)
++|++|||++||||.|+|||||++|++.|||+.|.|...+ . .+..++|+ ....|..++...
T Consensus 454 gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~-~-~~~~~~p~~~~~~C~~~~~~~ 515 (521)
T 1v10_A 454 GDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN-I-PIANAISPAWDDLCPKYNANN 515 (521)
T ss_dssp SCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG-H-HHHSCCCHHHHTHHHHHTTCC
T ss_pred CcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc-h-hhccCCChHHhhhchhhhccC
Confidence 9999999999999999999999999999999999886432 2 12344564 578998887654
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=3.5e-93 Score=781.25 Aligned_cols=478 Identities=24% Similarity=0.397 Sum_probs=369.7
Q ss_pred EEEEEEEEEEeCCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCC-----CCceeecCCCccCCCCCCCCCCC-CC
Q 007635 32 FYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-----ESLLMTWPGIQMRRNSWQDGVQG-TN 105 (595)
Q Consensus 32 ~~~~~v~~~~~~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-----~~~siH~HG~~~~~~~~~DGv~~-tq 105 (595)
+|+|++++..+++||+++++|+|||++ ||+||+++||+|+|+|+|+|+ ++++|||||+++.+++|+||+++ ||
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 799999999999999999999999999 999999999999999999999 99999999999999999999998 99
Q ss_pred CccCCCCeEEEEEEecCceeeeEEeccchhhhccCccccEEEccCCCC-CCCCCCCCCceeEeeeecccccHHHHHHHHh
Q 007635 106 CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVI-PIPFDQPEGDIIFLIGDWYTRNHTALRTALD 184 (595)
Q Consensus 106 ~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~ 184 (595)
|+|+||++|+|+|++++++||||||||.+.|+.+||+|+|||+++.+. +.+|+..++|++|+|+||+++...++..
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~--- 161 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG--- 161 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC---
Confidence 999999999999997788999999999999999999999999986531 2334333469999999999987654321
Q ss_pred cCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccceee
Q 007635 185 SGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNY 264 (595)
Q Consensus 185 ~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 264 (595)
.+.++.++|||++.+.|. .....+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.+++|+.+
T Consensus 162 ----~~~~d~~liNG~~~~~~~-----~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 162 ----AAQPDATLINGKGRYVGG-----PAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp ------CCSEEEETTBCCBTTC-----CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ----CCCCCEEEECcccccCCC-----CCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 156899999999986652 12345899999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCcEEEEEEEcCCCCCcceEEEEeeeccccc---ccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCc
Q 007635 265 TSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES---FWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQ 341 (595)
Q Consensus 265 ~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~---~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~ 341 (595)
+++.|+|||||||+|++++.+| +|||++........ ........++|+|.++.... +.....|...+ ++.
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~--p~~~~~~~~~~----l~~ 305 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVD-NYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANAD--PTTSANPNPAQ----LNE 305 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSS-EEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSC--CCCCCCSSCCB----CCG
T ss_pred CeEEEcccceEEEEEEcCCCcc-ceeeeeccccCCcccccccCCCceEEEEEECCCCCCC--CCCCCCCccCC----Ccc
Confidence 9999999999999999998778 89999976532111 01122346999998754211 11100111001 110
Q ss_pred cccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCC
Q 007635 342 PRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPN 421 (595)
Q Consensus 342 ~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~ 421 (595)
.++.+....+.|.... ....++++.+... .++. .|+|||++|..+..|.+++.+. +.+...
T Consensus 306 -----~~l~p~~~~~~p~~~~---~~~~~~~~~l~~~----~~~~-~~~iNg~~~~~~~~P~l~~~~~---g~~~~~--- 366 (503)
T 1hfu_A 306 -----ADLHALIDPAAPGIPT---PGAADVNLRFQLG----FSGG-RFTINGTAYESPSVPTLLQIMS---GAQSAN--- 366 (503)
T ss_dssp -----GGCBBSSSCSCSSCSS---TTCSSEEEECCEE----EETT-EEEETTBCCCCCSSCHHHHHHT---TCCSGG---
T ss_pred -----ccccccCccCCCCccc---CCcceEEEEEEee----ccCc-eEEECCCccCCCCCcchhhhhc---CCcccc---
Confidence 1222221111221100 0123444444321 1222 7999999999888898876542 222100
Q ss_pred CCCCCCCCCceeeeeecCCcEEEEEEec-CCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEE-CCCc
Q 007635 422 KPLTRPPRTDRSLINATYKGFIEIILQN-NDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEV-YPGA 499 (595)
Q Consensus 422 ~p~~~~~~~~~~v~~~~~g~~ve~vl~N-~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v-~p~g 499 (595)
..+.++.++.++.|++|||+++| ...+.||||||||+|+||+++.+. .+|+.+|+|||||.| +|++
T Consensus 367 -----~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~ 434 (503)
T 1hfu_A 367 -----DLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGD 434 (503)
T ss_dssp -----GSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTC
T ss_pred -----cCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCc
Confidence 11124578899999999999995 457889999999999999997552 368889999999999 9999
Q ss_pred EEEEEEEeCCceeeeeeeccccceeccceeEEEEeCCCCCCCCCCCCCC-CcccccccccCccc
Q 007635 500 WTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEENGDTEMGPPD-NVLYCGALQSKQKA 562 (595)
Q Consensus 500 ~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~~~~~~~~~~P~-~~~~cg~~~~~~~~ 562 (595)
|++|||++||||.|+|||||++|++.|||+.|.|...+ . .+..++|+ ....|..+...+..
T Consensus 435 ~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~-~-~~~~~~p~~~~~~C~~~~~~~~~ 496 (503)
T 1hfu_A 435 EVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN-T-VDANNPPVEWAQLCEIYDDLPPE 496 (503)
T ss_dssp EEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH-H-HHHCCCCHHHHHHHHHHHTCCHH
T ss_pred eEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh-h-hhccCCChHHhhhccchhhcCCc
Confidence 99999999999999999999999999999999886332 1 12244564 57899988876544
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=2.2e-91 Score=775.18 Aligned_cols=489 Identities=21% Similarity=0.310 Sum_probs=375.7
Q ss_pred cCceEEEEEEEEEEE--eCCCCee-EEEEEECCCCCCceEEecCCCEEEEEEEeCC-CCCceeecCCCccCCCCCCCCCC
Q 007635 27 EDDTIFYDFKVSYIT--ASPLGVP-QQVIAINGKFPGAVLNATTNNNIVINVQNDL-DESLLMTWPGIQMRRNSWQDGVQ 102 (595)
Q Consensus 27 ~~~~~~~~~~v~~~~--~~~dG~~-~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGv~ 102 (595)
.+.+++|+|++++.+ +.+||++ +.+|+|||++|||+||+++||+|+|+|+|+| +++++|||||+++.+++|+||++
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~ 109 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGAN 109 (559)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCC
Confidence 556899999999999 8999999 9999999999999999999999999999999 58999999999999999999999
Q ss_pred C-CCCccCC-CCeEEEEEEecCceeeeEEeccchhhhccCccccEEEccCCCCCCCCCCCCCce-eEeeeecccccHHHH
Q 007635 103 G-TNCPIPS-QWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFDQPEGDI-IFLIGDWYTRNHTAL 179 (595)
Q Consensus 103 ~-tq~~I~P-G~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~~ 179 (595)
+ |||||+| |++|+|+|++ +|+||||||||.+.|+.+||+|+|||+++.. .+ +|.|+ +|+|+||+++...++
T Consensus 110 ~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~--~~---~d~d~~~l~l~Dw~~~~~~~~ 183 (559)
T 2q9o_A 110 GVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPAS--LP---YDIDLGVFPITDYYYRAADDL 183 (559)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCS--SC---CSEEEEEEEEEEECSSCHHHH
T ss_pred ccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCc--CC---CcccceEEEEeccccCCHHHH
Confidence 8 9999999 9999999999 5899999999999999999999999998754 23 47887 999999999987766
Q ss_pred HHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccc
Q 007635 180 RTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT 259 (595)
Q Consensus 180 ~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~ 259 (595)
..... ....+.+++++|||+..+.|. ..+..+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 184 ~~~~~-~~~~~~~d~~liNG~~~~~~~-----~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 257 (559)
T 2q9o_A 184 VHFTQ-NNAPPFSDNVLINGTAVNPNT-----GEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPV 257 (559)
T ss_dssp HHHHT-TSCCCCBSEEEETTBCBCTTT-----CCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred hhhhh-cCCCCccceeEECCccccCcC-----CCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCccc
Confidence 43222 233567899999999976542 223468999999999999999999999999999999999999999999
Q ss_pred cceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEee--ecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccc-
Q 007635 260 SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASA--RFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQW- 336 (595)
Q Consensus 260 ~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~--~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~- 336 (595)
+|+.++++.|+|||||||+|++++.+| +|||++.. ..... ........++|+|.++... .|. .+.....+
T Consensus 258 ~p~~~~~l~l~pgeR~dvlv~~~~~~g-~y~i~a~~~~~~~~~-~~~~~~~~ail~y~~~~~~----~P~-~~~~~~~~~ 330 (559)
T 2q9o_A 258 NAMTVDSLFLAVGQRYDVVIDASRAPD-NYWFNVTFGGQAACG-GSLNPHPAAIFHYAGAPGG----LPT-DEGTPPVDH 330 (559)
T ss_dssp EEEEESCEEECTTCEEEEEEECCSCSS-EEEEEEECCGGGTTC-CBSSSCCEEEEEETTSCCS----CCC-CCCCCCCCC
T ss_pred CceEeCeEEEccEEEEEEEEECCCCCC-cEEEEEEeccccccC-CCCCCceeEEEEECCCCCC----CCC-CCCCcCCCc
Confidence 999999999999999999999998777 99999986 32111 1123456899999875421 121 11000000
Q ss_pred cccCccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccC-CCChhhhhhcccCCCcc
Q 007635 337 AAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVK-PETPIRLADKYNVKGAY 415 (595)
Q Consensus 337 ~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~-p~~P~l~~~~~~~~g~~ 415 (595)
.+.+. ..+.+..+.+.|..... ...++++.+.... ...+...|+|||++|.. +..|+|...+.+..
T Consensus 331 ~~~~~-----~~l~p~~~~~~p~~~~~---~~~~~~~~~~~~~--~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~--- 397 (559)
T 2q9o_A 331 QCLDT-----LDVRPVVPRSVPVNSFV---KRPDNTLPVALDL--TGTPLFVWKVNGSDINVDWGKPIIDYILTGNT--- 397 (559)
T ss_dssp TTCCC-----SCCCBSSCCBCCCTTCC---CCGGGEEEEEEEC--SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCC---
T ss_pred ccccc-----cccccCCCCCCCCcccc---cceeEEEEEEeec--CCCceEEEEECCEecccCCCCCcHhHhhcCCc---
Confidence 01111 12222221112221110 1122344443211 12345689999999964 56787755432110
Q ss_pred cCCCCCCCCCCCCCCceeeeeecC-CcEEEEEEecCC----CCceeeeecCceEEEEeecc---------cccCCC-CCC
Q 007635 416 KLDFPNKPLTRPPRTDRSLINATY-KGFIEIILQNND----TKMQSFHMDGYSFFVVGMDF---------GIWTES-NRN 480 (595)
Q Consensus 416 ~~~~~~~p~~~~~~~~~~v~~~~~-g~~ve~vl~N~~----~~~HP~HlHG~~F~Vv~~~~---------G~~~~~-~~~ 480 (595)
..| .+.+++.++. ++|++|+++|.+ .+.||||||||+||||+++. |.|++. ...
T Consensus 398 -----~~~------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~ 466 (559)
T 2q9o_A 398 -----SYP------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLA 466 (559)
T ss_dssp -----CCC------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGG
T ss_pred -----cCC------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCcccccc
Confidence 111 1346677754 688889999976 68999999999999999987 777653 235
Q ss_pred CCCcCCCCcccEEEECCCcEEEEEEEeCCceeeeeeeccccceeccceeEEEEeCCCCCCCCCCCC--CC-Ccccccccc
Q 007635 481 SYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEENGDTEMGP--PD-NVLYCGALQ 557 (595)
Q Consensus 481 ~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~~~~~~~~~~--P~-~~~~cg~~~ 557 (595)
.+|+.+|+|||||.|++++|++|||++||||.|||||||++|++.|||+.|.|.. ++.. ...++ |+ ....|..++
T Consensus 467 ~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~-~~~~-~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 467 RLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERP-ADLR-QRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp GCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH-HHHG-GGCCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECc-chhh-hccccCCchhhhhhccccc
Confidence 6899999999999999999999999999999999999999999999999998763 2221 22333 55 467998887
Q ss_pred cCc
Q 007635 558 SKQ 560 (595)
Q Consensus 558 ~~~ 560 (595)
...
T Consensus 545 ~~~ 547 (559)
T 2q9o_A 545 AYW 547 (559)
T ss_dssp HHG
T ss_pred ccc
Confidence 653
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=3.4e-84 Score=699.35 Aligned_cols=404 Identities=18% Similarity=0.262 Sum_probs=325.1
Q ss_pred ccCceEEEEEEEEEEEeCCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCC
Q 007635 26 AEDDTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTN 105 (595)
Q Consensus 26 ~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 105 (595)
+.+.+++|+|++++..+.+||+++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||++
T Consensus 12 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~--- 86 (439)
T 2xu9_A 12 SQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF--- 86 (439)
T ss_dssp CBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---
T ss_pred cCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---
Confidence 45678999999999999999999999999999999999999999999999999999999999999886 5999987
Q ss_pred CccCCCCeEEEEEEec-CceeeeEEeccc----hhhhccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHH--
Q 007635 106 CPIPSQWNWTYQFQVK-DQIGSFFYFPSL----NLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA-- 178 (595)
Q Consensus 106 ~~I~PG~~~tY~f~~~-~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~-- 178 (595)
+.|+||++|+|+|+++ +++||||||||. +.|+.+||+|+|||+++.+.. +...+++|++|+++||+++....
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 5699999999999986 479999999996 579999999999999865321 11134789999999999975310
Q ss_pred --HHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccC
Q 007635 179 --LRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEG 256 (595)
Q Consensus 179 --~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG 256 (595)
....+. ...++.++|||+.. |.++|++| +|||||||+|+.+.+.|+|+||+|+||++||
T Consensus 166 ~~~~~~~~----g~~~~~~~iNG~~~--------------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG 226 (439)
T 2xu9_A 166 HTPMDWMN----GKEGDLVLVNGALR--------------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADG 226 (439)
T ss_dssp CCHHHHHH----CCCCSEEEETTEES--------------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETT
T ss_pred CCcccccc----CCCCCEEEECCccC--------------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCC
Confidence 001111 13468999999986 89999999 9999999999999999999999999999999
Q ss_pred ccc-cceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeeccccc--------------ccccceeEEEEEecCCCCCC
Q 007635 257 HYT-SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES--------------FWQRVTGVAILHYSNSKGAA 321 (595)
Q Consensus 257 ~~~-~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~--------------~~~~~~~~~il~y~~~~~~~ 321 (595)
.++ +|..++++.|+|||||||+|++++ +| +|+|++........ ........++++|.+...
T Consensus 227 ~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 302 (439)
T 2xu9_A 227 GFLEEPLEVSELLLAPGERAEVLVRLRK-EG-RFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK-- 302 (439)
T ss_dssp EEEEEEEEESCEEECTTCEEEEEEECCS-SE-EEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCC--
T ss_pred CCCCCceEeceEEECCceeEEEEEEcCC-Cc-eEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCc--
Confidence 997 799999999999999999999997 77 89999864321100 001235678889976431
Q ss_pred CCCCCCCCCCCCccccccCccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCC
Q 007635 322 SGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPET 401 (595)
Q Consensus 322 ~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~ 401 (595)
+.++|. . +..... + +.+ ..++++.+.... .+ ..|+|||++|..+..
T Consensus 303 ~~~~p~------~----l~~~~~----l------~~~---------~~~r~~~l~~~~----~g-~~~~iNg~~~~~~~~ 348 (439)
T 2xu9_A 303 PLPLPK------A----LSPFPT----L------PAP---------VVTRRLVLTEDM----MA-ARFFINGQVFDHRRV 348 (439)
T ss_dssp CCCCCS------C----CCCCCC----C------CCC---------SEEEEEEEEEEG----GG-TEEEETTBCCCTTCC
T ss_pred cccCcc------c----CCCccc----C------CCC---------CcceEEEEEeec----cC-ceEeECCEECCCCCC
Confidence 112221 0 000000 0 011 124677666432 11 369999999853211
Q ss_pred hhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCC
Q 007635 402 PIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNS 481 (595)
Q Consensus 402 P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~ 481 (595)
.+.++.|++++|+|+|.+.+.||||||||+||||+++.+.+
T Consensus 349 --------------------------------~~~~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~------- 389 (439)
T 2xu9_A 349 --------------------------------DLKGQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF------- 389 (439)
T ss_dssp --------------------------------CEEECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC-------
T ss_pred --------------------------------ceecCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC-------
Confidence 14578999999999999999999999999999999976543
Q ss_pred CCcCCCCcccEEEECCCcEEEEEEEeCCceeeeeeeccccceeccceeEEEEe
Q 007635 482 YNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 482 ~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
.+|.|||||.|+|++|++|||++||||.|+|||||++|++.|||..++|.
T Consensus 390 ---~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 390 ---PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp ---SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred ---CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 35999999999999999999999999999999999999999999999873
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=7.9e-84 Score=697.44 Aligned_cols=407 Identities=15% Similarity=0.153 Sum_probs=321.2
Q ss_pred ceEEEEEEEEEEEeCC-CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCc
Q 007635 29 DTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCP 107 (595)
Q Consensus 29 ~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~ 107 (595)
.+++|+|++++.++++ +|.++.+|+|||++|||+||+++||+|+|+|+|+|+++++|||||+++.++ +||++ ||+
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~ 92 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARM 92 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGC
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCc
Confidence 3578999999999988 799999999999999999999999999999999999999999999999865 99998 899
Q ss_pred cCCCCeEEEEEEecCceeeeEEeccc----hhhhccCccccEEEccCCCCCCCCC--CCCCceeEeeeecccccHHHHHH
Q 007635 108 IPSQWNWTYQFQVKDQIGSFFYFPSL----NLQRVSGGFGPVIINNRKVIPIPFD--QPEGDIIFLIGDWYTRNHTALRT 181 (595)
Q Consensus 108 I~PG~~~tY~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~d~e~~l~l~d~~~~~~~~~~~ 181 (595)
|+||++|+|+|++++++||||||||. +.|+.+||+|+|||+++.....+++ ..++|++|+|+||+++...++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999996569999999997 7899999999999999754322222 24789999999999985543211
Q ss_pred HHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEE-eCccceeeeccCccc-
Q 007635 182 ALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRI-QNHNLLLVETEGHYT- 259 (595)
Q Consensus 182 ~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~vi~~DG~~~- 259 (595)
...+.....++.++|||+.. |.++|++| +|||||||+|..+.+.|+| +||+|+||++||.++
T Consensus 173 -~~~~~~~~~~d~~liNG~~~--------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~ 236 (451)
T 2uxt_A 173 -NEPGSGGFVGDTLLVNGVQS--------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLP 236 (451)
T ss_dssp -CCCSSSCCCCSEEEETTEES--------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEE
T ss_pred -ccccCCCCcCCEEEECCccc--------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccC
Confidence 11122345689999999996 88999999 9999999999999999999 899999999999998
Q ss_pred cceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeeccccc-------ccccceeEEEEEecCCCCCCCCCCCCCCCCC
Q 007635 260 SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES-------FWQRVTGVAILHYSNSKGAASGPLPEAPSDI 332 (595)
Q Consensus 260 ~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~-------~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~ 332 (595)
+|..++++.|+|||||||+|++++ ++ +|||++........ ........++++|........ +... .|
T Consensus 237 ~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~-~p-- 310 (451)
T 2uxt_A 237 APVSVKQLSLAPGERREILVDMSN-GD-EVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDS-LP-- 310 (451)
T ss_dssp EEEEESSEEECTTCEEEEEEECTT-CC-CEEEEC----------------CCCCSCCEEEEEEECSCCC-----C-CC--
T ss_pred CceEeceEEECceeEEEEEEEeCC-CC-EEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC-cccc-Cc--
Confidence 699999999999999999999995 46 89999765432100 011133457888875431100 0000 11
Q ss_pred CccccccCccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCC
Q 007635 333 YNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVK 412 (595)
Q Consensus 333 ~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~ 412 (595)
..|.+....+. ....++++.|. + .|+|||++|..+.
T Consensus 311 --------------~~L~~~~~~~~--------~~~~~~~~~l~--------~--~~~iNg~~f~~~~------------ 346 (451)
T 2uxt_A 311 --------------MRLLPTEIMAG--------SPIRSRDISLG--------D--DPGINGQLWDVNR------------ 346 (451)
T ss_dssp --------------SCSSSSCCCCC--------CCSEEEEEEEC--------S--SSSBTTBCCCTTC------------
T ss_pred --------------cccCCCCCCCC--------CCcceEEEEEe--------e--EEEECCEeCCCCC------------
Confidence 01111100000 12345666553 1 5899999985321
Q ss_pred CcccCCCCCCCCCCCCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccE
Q 007635 413 GAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCT 492 (595)
Q Consensus 413 g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDT 492 (595)
..+.++.|++|+|+|+|. +.||||||||+|+||++++. .+++.+|.||||
T Consensus 347 --------------------~~~~~~~G~~~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~--------~~~~~~p~~rDT 396 (451)
T 2uxt_A 347 --------------------IDVTAQQGTWERWTVRAD--EPQAFHIEGVMFQIRNVNGA--------MPFPEDRGWKDT 396 (451)
T ss_dssp --------------------CCEEEETTCEEEEEEEEE--EEEEEEETTCEEEEEEETTB--------CCCGGGSSCBSE
T ss_pred --------------------CcEEcCCCCEEEEEEECC--CCcCeEECCceEEEEeeCCc--------CCCcccCCCccE
Confidence 124578999999999997 78999999999999999632 256678999999
Q ss_pred EEECCCcEEEEEEEeCCcee----eeeeeccccceeccceeEEEEeCCC
Q 007635 493 TEVYPGAWTAILVSLDNVGV----WNLRVENLDRWYLGQETYMKIVNPE 537 (595)
Q Consensus 493 v~v~p~g~~~Irf~adNpG~----W~~HCHil~h~~~Gm~~~~~V~~~~ 537 (595)
|.| +++++|+|++||||. |||||||++|++.|||..|.|...+
T Consensus 397 v~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 397 VWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp EEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred EEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 999 899999999999988 9999999999999999999998654
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=3.5e-82 Score=696.03 Aligned_cols=422 Identities=14% Similarity=0.139 Sum_probs=325.3
Q ss_pred ceEEEEEEEEEEE--eCCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCC
Q 007635 29 DTIFYDFKVSYIT--ASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNC 106 (595)
Q Consensus 29 ~~~~~~~~v~~~~--~~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~ 106 (595)
..++|+|++++.. +.+||..+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.+ ++||++ ||
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~ 110 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--ED 110 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SS
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CC
Confidence 3589999999654 67899999999999999999999999999999999999999999999999864 699976 89
Q ss_pred ccCCCCeEEEEEEecCceeeeEEeccch----hhhccCccccEEEccCCCCCCCCCC--CCCceeEeeeecccccHHHHH
Q 007635 107 PIPSQWNWTYQFQVKDQIGSFFYFPSLN----LQRVSGGFGPVIINNRKVIPIPFDQ--PEGDIIFLIGDWYTRNHTALR 180 (595)
Q Consensus 107 ~I~PG~~~tY~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~l~d~~~~~~~~~~ 180 (595)
+|+||++|+|+|++.+++||||||||.. .|+++||+|+|||+++.....+++. .+.|++|+|+||+++...++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999965689999999974 5888999999999998764443332 267899999999987544321
Q ss_pred HHHhcCC-CCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeC-------ccceee
Q 007635 181 TALDSGK-DLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQN-------HNLLLV 252 (595)
Q Consensus 181 ~~~~~~~-~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~vi 252 (595)
. ..+. ....+|.++|||+.. +.++|++ ++|||||||+|..+.+.|+|++ |+|+||
T Consensus 191 ~--~~~~~~~~~gd~~lvNG~~~--------------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vI 253 (534)
T 3abg_A 191 T--TNGELNSFWGDVIHVNGQPW--------------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVI 253 (534)
T ss_dssp C--CTTCSSCCCCSEEEETTEES--------------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEE
T ss_pred c--cCCCCccccCceeccCCccC--------------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEE
Confidence 1 1111 234579999999986 7899998 5899999999999999999987 999999
Q ss_pred eccCcc-ccceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecc--cccccccceeEEEEEecCCCCCCCCCCCCCC
Q 007635 253 ETEGHY-TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFV--NESFWQRVTGVAILHYSNSKGAASGPLPEAP 329 (595)
Q Consensus 253 ~~DG~~-~~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~--~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~ 329 (595)
++||.+ .+|..+++|.|+|||||||+|++++.+|++|+|++..... ...........++++|.....+.. +.+...
T Consensus 254 a~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~~ 332 (534)
T 3abg_A 254 ASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQ-PDTSVV 332 (534)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSC-SCCCCC
T ss_pred EeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcC-CCCCCC
Confidence 999985 5799999999999999999999998777579998743111 000001123457889875432100 000001
Q ss_pred CCCCccccccCccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcc
Q 007635 330 SDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKY 409 (595)
Q Consensus 330 p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~ 409 (595)
| ..+.+. +.+.+ ....++++.+... + ..|+|||++|..+..|.+
T Consensus 333 P----------------~~L~~~-~~p~~-------~~~~~~~~~~~~~-----~--~~w~iNG~~f~~~~~p~l----- 376 (534)
T 3abg_A 333 P----------------ANLRDV-PFPSP-------TTNTPRQFRFGRT-----G--PTWTINGVAFADVQNRLL----- 376 (534)
T ss_dssp C----------------CCCCCC-SCCCC-------CCCCCEEEECSCC-----C--STTCCCCBTTBCTTSCCC-----
T ss_pred c----------------cccccC-CCCCC-------ccccceEEEEecc-----C--ceeEECCcccCCCCCcce-----
Confidence 1 011110 00111 1134566665421 1 269999999865433321
Q ss_pred cCCCcccCCCCCCCCCCCCCCceeeeeecCCcEEEEEEecCCC-CceeeeecCceEEEEeecccccCCCCCCCCCcCCCC
Q 007635 410 NVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDT-KMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAI 488 (595)
Q Consensus 410 ~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~-~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~ 488 (595)
+.++.|++++|+|+|.+. +.||||||||+|+||+++.|.++ ...+++.+ .
T Consensus 377 -------------------------~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~---~~~~~~~~-~ 427 (534)
T 3abg_A 377 -------------------------ANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNA---RTVMPYES-G 427 (534)
T ss_dssp -------------------------CEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSS---SCCCSGGG-S
T ss_pred -------------------------eeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCc---CcCCcccc-C
Confidence 246789999999999875 58999999999999999655432 12356666 9
Q ss_pred cccEEEECCCcEEEEEEE-eCCceeeeeeeccccceeccceeEEEEeCCC
Q 007635 489 SKCTTEVYPGAWTAILVS-LDNVGVWNLRVENLDRWYLGQETYMKIVNPE 537 (595)
Q Consensus 489 ~RDTv~v~p~g~~~Irf~-adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~ 537 (595)
|||||.|+|+++++|||+ +||||.|+|||||++|++.|||+.|.|...+
T Consensus 428 ~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 428 LKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 999999999999999999 8999999999999999999999999998655
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=4.1e-81 Score=687.20 Aligned_cols=428 Identities=18% Similarity=0.199 Sum_probs=322.1
Q ss_pred ceEEEEEEEEEEEeC--CCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCC----------------------Cce
Q 007635 29 DTIFYDFKVSYITAS--PLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDE----------------------SLL 84 (595)
Q Consensus 29 ~~~~~~~~v~~~~~~--~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~----------------------~~s 84 (595)
...+|+|++++.... +++.++++|+|||++|||+||+++||+|+|+|+|+|++ +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 355699999998765 45678999999999999999999999999999999975 899
Q ss_pred eecCCCccCCCCCCCCCCC---CCCccCCCCeE---EEEEEecCceeeeEEeccch----hhhccCccccEEEccCCCCC
Q 007635 85 MTWPGIQMRRNSWQDGVQG---TNCPIPSQWNW---TYQFQVKDQIGSFFYFPSLN----LQRVSGGFGPVIINNRKVIP 154 (595)
Q Consensus 85 iH~HG~~~~~~~~~DGv~~---tq~~I~PG~~~---tY~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~ 154 (595)
|||||+++. +++||+++ +||+|+||++| +|+|++.+++||||||||.. .|+++||+|+|||+++.+.+
T Consensus 104 iHwHGl~~~--~~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTP--DDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCC--GGGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCC--CccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 999999886 67999994 89999999555 99999866799999999974 58999999999999976544
Q ss_pred CCCCCCCCceeEeeeecccccHHHHHHHHh-----------cCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecC
Q 007635 155 IPFDQPEGDIIFLIGDWYTRNHTALRTALD-----------SGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDP 223 (595)
Q Consensus 155 ~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~-----------~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~ 223 (595)
.++..+++|++|+|+||+++...++..... .......+++++|||+.+ +.++|++
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--------------p~~~v~~ 247 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--------------PYLEVEP 247 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--------------CEEECCS
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc--------------ceEEecC
Confidence 444456889999999999875533211000 001234679999999997 8899998
Q ss_pred CCEEEEEEEEcCCCceEEEEEeCc-cceeeeccCccc-cceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeeccccc
Q 007635 224 GKTYRVRVHNVGTSTSLNFRIQNH-NLLLVETEGHYT-SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES 301 (595)
Q Consensus 224 G~~~rlRliN~~~~~~~~~~i~gh-~~~vi~~DG~~~-~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~ 301 (595)
| +|||||||+|..+.+.|+|+|| +|+||++||.++ +|..++++.|+|||||||+|++++.+|..+.++........
T Consensus 248 ~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~- 325 (513)
T 2wsd_A 248 R-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGD- 325 (513)
T ss_dssp S-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSS-
T ss_pred C-EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEeccccccc-
Confidence 5 8999999999999999999999 999999999998 69999999999999999999999877733334332211011
Q ss_pred ccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCc
Q 007635 302 FWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPV 381 (595)
Q Consensus 302 ~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~ 381 (595)
.......++++|..+.... .+.+...|. .+.... . . +. .....++++.|....
T Consensus 326 -~~~~~~~~il~~~~~~~~~-~~~~~~~p~------~l~~~~-----~---~--~~-------~~~~~~~~~~l~~~~-- 378 (513)
T 2wsd_A 326 -VNPETDANIMQFRVTKPLA-QKDESRKPK------YLASYP-----S---V--QH-------ERIQNIRTLKLAGTQ-- 378 (513)
T ss_dssp -CCTTTTTEEEEEECCSCCS-SCCCCCCCS------BCSCCG-----G---G--CC-------CCEEEEEEEEEEEEE--
T ss_pred -CCCCCCcceEEEEeccCcc-cCccCCCCc------cccCCC-----C---c--cc-------CCCcceEEEEEEeec--
Confidence 0112345788887543110 000000110 010000 0 0 00 012345666665432
Q ss_pred ccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecCCcEEEEEEecCCCCceeeeecC
Q 007635 382 TIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDG 461 (595)
Q Consensus 382 ~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG 461 (595)
...|...|+|||++|..+. .+.++.|++|+|+|+|.+.+.|||||||
T Consensus 379 ~~~g~~~~~iNg~~~~~~~---------------------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG 425 (513)
T 2wsd_A 379 DEYGRPVLLLNNKRWHDPV---------------------------------TETPKVGTTEIWSIINPTRGTHPIHLHL 425 (513)
T ss_dssp CTTSCEEEEETTBCTTSCC---------------------------------CBCCBTTCEEEEEEEECSSSCEEEEESS
T ss_pred CCCCCceEeECCccCCCcc---------------------------------cEecCCCCEEEEEEEcCCCCCcCEeEeC
Confidence 1235567999999874320 1235789999999999988999999999
Q ss_pred ceEEEEeeccc---ccCCCCCCCCCcC---------CCCcccEEEECCCcEEEEEEEe-CCceeeeeeeccccceeccce
Q 007635 462 YSFFVVGMDFG---IWTESNRNSYNKW---------DAISKCTTEVYPGAWTAILVSL-DNVGVWNLRVENLDRWYLGQE 528 (595)
Q Consensus 462 ~~F~Vv~~~~G---~~~~~~~~~~n~~---------~p~~RDTv~v~p~g~~~Irf~a-dNpG~W~~HCHil~h~~~Gm~ 528 (595)
|+||||+++.+ .|++.. .+|+. ++.|||||.|+|+++++|+|++ ||||.|+|||||++|++.|||
T Consensus 426 ~~F~Vl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm 503 (513)
T 2wsd_A 426 VSFRVLDRRPFDIARYQESG--ELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMM 503 (513)
T ss_dssp CCEEEEEEEEBCHHHHHHHC--CCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCE
T ss_pred ceEEEEEecCcccccccccc--cccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCc
Confidence 99999998752 232211 13333 3469999999999999999998 899999999999999999999
Q ss_pred eEEEEeCC
Q 007635 529 TYMKIVNP 536 (595)
Q Consensus 529 ~~~~V~~~ 536 (595)
..++|..+
T Consensus 504 ~~~~V~~~ 511 (513)
T 2wsd_A 504 RPMDITDP 511 (513)
T ss_dssp EEEEEBCC
T ss_pred eeEEEeCC
Confidence 99999854
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=6.1e-80 Score=667.47 Aligned_cols=410 Identities=17% Similarity=0.201 Sum_probs=316.0
Q ss_pred ccccCceEEEEEEEEEEEeCC-CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCC
Q 007635 24 CFAEDDTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ 102 (595)
Q Consensus 24 ~~~~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 102 (595)
..+.+++++|+|++++.++.. +|.++++|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++. +++||++
T Consensus 44 ~~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~p 121 (481)
T 3zx1_A 44 ESKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGSP 121 (481)
T ss_dssp CCCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT
T ss_pred cccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCCc
Confidence 346678899999999999986 6999999999999999999999999999999999999999999999874 7899987
Q ss_pred CCCCccCCCCeEEEEEEecCc-eeeeEEeccc----hhhhccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHH
Q 007635 103 GTNCPIPSQWNWTYQFQVKDQ-IGSFFYFPSL----NLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHT 177 (595)
Q Consensus 103 ~tq~~I~PG~~~tY~f~~~~~-~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~ 177 (595)
||+|+||++|+|+|+++++ +||||||||. +.|+.+||+|+|||+++.+...++ ++++ |+|+||+++...
T Consensus 122 --q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g 195 (481)
T 3zx1_A 122 --HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENA 195 (481)
T ss_dssp --TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTS
T ss_pred --cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCC
Confidence 8999999999999999643 7999999995 689999999999999976543322 4455 999999997543
Q ss_pred HHH-----HHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceee
Q 007635 178 ALR-----TALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLV 252 (595)
Q Consensus 178 ~~~-----~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi 252 (595)
++. ..+. ...++.++|||+.. |.++|++|+ ||||||+|..+.+.|+|+||.|+||
T Consensus 196 ~~~~~~~~~~~~----g~~gd~~lvNG~~~--------------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vI 255 (481)
T 3zx1_A 196 QIPNNNLNDWLN----GREGEFVLINGQFK--------------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILV 255 (481)
T ss_dssp CCCCCCHHHHHH----CCCCSEEEETTEES--------------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEE
T ss_pred ccccccchhhcc----CCcCCEEEECCccC--------------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEE
Confidence 321 1111 23578999999986 899999998 9999999999999999999999999
Q ss_pred eccCccc-cceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeeccccc-ccccceeEEEEEecCCCCCCCCCCCCCCC
Q 007635 253 ETEGHYT-SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES-FWQRVTGVAILHYSNSKGAASGPLPEAPS 330 (595)
Q Consensus 253 ~~DG~~~-~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~~il~y~~~~~~~~~~~p~~~p 330 (595)
++||.++ +|..++++.|+|||||||+|++++ ++ .|.+++........ .........++++.... .+.++|.
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~lP~--- 328 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAPK-DG-NFKLESAYYDRDKMMVKEEPNTLFLANINLKK--ENVELPK--- 328 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECSS-CE-EEEEEECCCCCCCSSCCCCCCCEEEEEEEEEC--CCCCCCS---
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcCC-Cc-EEEEEEecccccCccccCCCCceeEEEEecCC--CCccCCc---
Confidence 9998765 699999999999999999999985 45 78887744321100 00012223344433221 1112221
Q ss_pred CCCccccccCccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCc--c--cCCe--------EEEEecCeeccC
Q 007635 331 DIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPV--T--IDGK--------VRSTLNGISFVK 398 (595)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~--~--~~g~--------~~~~iNg~s~~~ 398 (595)
.+ .+..+.+ ..+.++++.+...... . ..+. ..|+|||+.|..
T Consensus 329 -------~l----------~~~~~~~---------~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~ 382 (481)
T 3zx1_A 329 -------NL----------KIFKPSE---------EPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL 382 (481)
T ss_dssp -------CS----------CCCCCCC---------CCCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT
T ss_pred -------cc----------cCCCCCC---------CCCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC
Confidence 00 0000001 1124566666542110 0 0001 139999988731
Q ss_pred CCChhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEee--cccccCC
Q 007635 399 PETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGM--DFGIWTE 476 (595)
Q Consensus 399 p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~--~~G~~~~ 476 (595)
. ...+.++.|++|+|+|.|.+.+.|||||||++|+|+++ +...+.
T Consensus 383 ~--------------------------------~~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~~~- 429 (481)
T 3zx1_A 383 K--------------------------------RIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQK- 429 (481)
T ss_dssp T--------------------------------CCCEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEEEE-
T ss_pred C--------------------------------CceEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCCCC-
Confidence 1 11256789999999999999999999999999999998 322211
Q ss_pred CCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceeeeeeeccccceeccceeEEEEe
Q 007635 477 SNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 477 ~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
..++.|||||.|+|+++++|+|++||||.|+||||+++|++.|||..|+|.
T Consensus 430 -------~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 430 -------AEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp -------CSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred -------cccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 124799999999999999999999999999999999999999999999987
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2.4e-79 Score=690.65 Aligned_cols=459 Identities=14% Similarity=0.114 Sum_probs=309.3
Q ss_pred CceEEEEEEEEEEEeC--CCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCC-----------------------
Q 007635 28 DDTIFYDFKVSYITAS--PLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDES----------------------- 82 (595)
Q Consensus 28 ~~~~~~~~~v~~~~~~--~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~----------------------- 82 (595)
...+.|++++++.... +++..+++|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 3457899999887754 566788999999999999999999999999999999755
Q ss_pred ------------------ceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccc----hhhhccC
Q 007635 83 ------------------LLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL----NLQRVSG 140 (595)
Q Consensus 83 ------------------~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~----~~q~~~G 140 (595)
|+|||||+++. +++||++ ||+|+||++|+|+|++.+++||||||||. +.|+.+|
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~--~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~G 185 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTG--GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCC--TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccC--CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhcc
Confidence 67899999874 6799977 99999999999999997668999999995 6899999
Q ss_pred ccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHHHHHH--H-------h-----cC---CCCCCCceEEEccCCCC
Q 007635 141 GFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTA--L-------D-----SG---KDLDMPDGVLINGKGPY 203 (595)
Q Consensus 141 l~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~--~-------~-----~~---~~~~~~d~~liNG~~~~ 203 (595)
|+|+|||+++.+...+...+++|++|+|+||+++...+.... + . .+ ......+.++|||+.+
T Consensus 186 l~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~- 264 (612)
T 3gyr_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc-
Confidence 999999999776555555778999999999998754322100 0 0 00 1123468899999986
Q ss_pred CCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCcc-------ceeeeccCcccc-cee------ecEEEE
Q 007635 204 RYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHN-------LLLVETEGHYTS-QQN------YTSFEI 269 (595)
Q Consensus 204 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~-------~~vi~~DG~~~~-p~~------~~~l~i 269 (595)
+.+.++. ++|||||||+|+.+.+.|+|++|. |+|||+||.+++ |+. +++|.|
T Consensus 265 -------------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i 330 (612)
T 3gyr_A 265 -------------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp -------------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred -------------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEe
Confidence 8888875 589999999999999999999984 999999999985 554 458999
Q ss_pred cCCcEEEEEEEcCCCCCcceEEEEeeeccccc---ccccceeEEEEEecCCCCC--CCCCCCCCCCCCCccccccCcccc
Q 007635 270 HVGQSYSFLVTMDQNASSDYYIVASARFVNES---FWQRVTGVAILHYSNSKGA--ASGPLPEAPSDIYNQWAAMTQPRS 344 (595)
Q Consensus 270 ~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~---~~~~~~~~~il~y~~~~~~--~~~~~p~~~p~~~~~~~~~~~~~~ 344 (595)
+|||||||+|++++.++..|+++......... .........+++|...... ....+|. ... . ... .
T Consensus 331 ~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~--~---~~~---~ 401 (612)
T 3gyr_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPE-VLS--G---SFR---R 401 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCS-SCC--S---SCC---C
T ss_pred ccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccc-ccc--c---ccc---c
Confidence 99999999999998877334444332211111 0112334456666543211 1111111 000 0 000 0
Q ss_pred ccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCC-cccCCeEEEEecCeecc-CCCChhhhhhc-ccCCC---cccCC
Q 007635 345 IRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPP-VTIDGKVRSTLNGISFV-KPETPIRLADK-YNVKG---AYKLD 418 (595)
Q Consensus 345 ~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~-~~~~g~~~~~iNg~s~~-~p~~P~l~~~~-~~~~g---~~~~~ 418 (595)
... ..+ ...+...+..... ........|.++..... ....|...... ....+ .+.
T Consensus 402 ----~~~----~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 462 (612)
T 3gyr_A 402 ----MSH----DIP---------HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYR-- 462 (612)
T ss_dssp ----CCT----TSC---------CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEE--
T ss_pred ----ccc----ccc---------cccccccccccccccccccccccccccccccccccccccceeeeccCCCcccccc--
Confidence 000 000 0000010100000 00000111111111000 00000000000 00000 000
Q ss_pred CCCCCCCCCCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCC----------------CCCCC
Q 007635 419 FPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTES----------------NRNSY 482 (595)
Q Consensus 419 ~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~----------------~~~~~ 482 (595)
.++....+...+.++.|++|+|+|+|.+.+.||||||||+||||+++.+.+... .....
T Consensus 463 -----~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (612)
T 3gyr_A 463 -----RTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp -----EEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred -----ccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCc
Confidence 000011122346788999999999999999999999999999999865432211 11235
Q ss_pred CcCCCCcccEEEECCCcEEEEEEE-eCCceeeeeeeccccceeccceeEEEEeCCCC
Q 007635 483 NKWDAISKCTTEVYPGAWTAILVS-LDNVGVWNLRVENLDRWYLGQETYMKIVNPEE 538 (595)
Q Consensus 483 n~~~p~~RDTv~v~p~g~~~Irf~-adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~~ 538 (595)
+..++.|||||.|++++|++|||+ +||||.|+|||||++|++.|||..|+|..|+.
T Consensus 538 ~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred ccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 667789999999999999999999 79999999999999999999999999997764
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=9.8e-80 Score=664.45 Aligned_cols=385 Identities=16% Similarity=0.228 Sum_probs=301.2
Q ss_pred EEECCC-CCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEe
Q 007635 52 IAINGK-FPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYF 130 (595)
Q Consensus 52 ~~~Ng~-~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH 130 (595)
|+|||+ +|||+||+++||+|+|+|+|+|+++++|||||+++. +++||+++ |+|+||++|+|+|++++++||||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH 103 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYH 103 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEec
Confidence 999999 999999999999999999999999999999999885 67999997 9999999999999997679999999
Q ss_pred cc----chhhhccCccccEEEccCCCCCCCCCCCC-CceeEeeeecccccHHHHHHH--HhcCCCCCCCceEEEccCCCC
Q 007635 131 PS----LNLQRVSGGFGPVIINNRKVIPIPFDQPE-GDIIFLIGDWYTRNHTALRTA--LDSGKDLDMPDGVLINGKGPY 203 (595)
Q Consensus 131 ~H----~~~q~~~Gl~G~liV~~~~~~~~~~~~~d-~e~~l~l~d~~~~~~~~~~~~--~~~~~~~~~~d~~liNG~~~~ 203 (595)
|| ++.|+.+||+|+|||+++... .++. +| +|++|+|+||+++. .++... .........++.++|||+..
T Consensus 104 ~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~~- 179 (448)
T 3aw5_A 104 PHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVKD- 179 (448)
T ss_dssp ECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEET-
T ss_pred cCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCccc-
Confidence 99 789999999999999997653 2222 35 89999999999986 432110 00011124679999999996
Q ss_pred CCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEE--eC---ccceeeeccCcccc-ceeecEEEEcCCcEEEE
Q 007635 204 RYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRI--QN---HNLLLVETEGHYTS-QQNYTSFEIHVGQSYSF 277 (595)
Q Consensus 204 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~vi~~DG~~~~-p~~~~~l~i~pG~R~dv 277 (595)
+.++|++| +|||||||+|..+.+.|+| +| |+|+||++||.+++ |..++++.|+|||||||
T Consensus 180 -------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dv 245 (448)
T 3aw5_A 180 -------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245 (448)
T ss_dssp -------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred -------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEE
Confidence 89999999 9999999999999999999 99 99999999999998 99999999999999999
Q ss_pred EEEcCCCCCcceEEEEeeeccccc----------ccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccc
Q 007635 278 LVTMDQNASSDYYIVASARFVNES----------FWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQ 347 (595)
Q Consensus 278 lv~~~~~~g~~y~i~~~~~~~~~~----------~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~ 347 (595)
+|++++ + .|||++........ ........++++|.+.....+ |. .+..
T Consensus 246 lv~~~~--~-~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~----------~L~~------ 303 (448)
T 3aw5_A 246 VVELGE--G-VYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP---VE----------ALSD------ 303 (448)
T ss_dssp EEEECS--E-EEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC---CC----------CCSC------
T ss_pred EEECCC--C-ceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC---cc----------ccCC------
Confidence 999983 5 89999875432100 011234567788865432110 11 0100
Q ss_pred cCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCC
Q 007635 348 NTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRP 427 (595)
Q Consensus 348 ~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~ 427 (595)
+. .+ +. ....++++.|... ...|+|||++|..+ .|
T Consensus 304 -lp----~~-~~------~~~~~~~~~l~~~-------~~~~~iNg~~~~~~-~p------------------------- 338 (448)
T 3aw5_A 304 -PP----PE-PP------KPTRTRRFALSLS-------GMQWTINGMFWNAS-NP------------------------- 338 (448)
T ss_dssp -CC----CC-CC------CCSEEEEEEEEEE-------TTEEEETTBCCCTT-CT-------------------------
T ss_pred -CC----CC-CC------CCCceEEEEEeCC-------CceeeECCCcCCCC-CC-------------------------
Confidence 00 00 00 1235677777542 12599999998532 11
Q ss_pred CCCceeeee-ecCCcEEEEEEecCC-CCceeeeecCceEEEEeecccccCC-CCCCCC----CcCCCCcccEEEECCCcE
Q 007635 428 PRTDRSLIN-ATYKGFIEIILQNND-TKMQSFHMDGYSFFVVGMDFGIWTE-SNRNSY----NKWDAISKCTTEVYPGAW 500 (595)
Q Consensus 428 ~~~~~~v~~-~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vv~~~~G~~~~-~~~~~~----n~~~p~~RDTv~v~p~g~ 500 (595)
.+. ++.|++|+|+|+|.+ .+.||||||||+||||+++ |.+.. .+...+ +..++.|||||.|+|+++
T Consensus 339 ------~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~ 411 (448)
T 3aw5_A 339 ------LFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGET 411 (448)
T ss_dssp ------TCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCE
T ss_pred ------ceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCE
Confidence 123 578999999999998 7899999999999999995 54431 112223 234567999999999999
Q ss_pred EEEE--EE---eCCceeeeeeeccccceeccceeEEEEe
Q 007635 501 TAIL--VS---LDNVGVWNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 501 ~~Ir--f~---adNpG~W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
++|+ |+ +||| |+|||||++|++.|||..|.|.
T Consensus 412 ~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 412 VKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp EEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 9665 98 8999 9999999999999999999874
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.8e-77 Score=646.27 Aligned_cols=416 Identities=17% Similarity=0.211 Sum_probs=307.1
Q ss_pred ceEEEEEEEEEEEeCCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCcc
Q 007635 29 DTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPI 108 (595)
Q Consensus 29 ~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I 108 (595)
..+.|+|++++.+++++|.++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++. +++||++ ||+|
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~i 91 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGII 91 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TCCB
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cCcC
Confidence 45789999999999999999999999999999999999999999999999999999999999986 5799988 8999
Q ss_pred CCCCeEEEEEEecCceeeeEEeccc----hhhhccCccccEEEccCCCCCCCCC--CCCCceeEeeeecccccHHHHHHH
Q 007635 109 PSQWNWTYQFQVKDQIGSFFYFPSL----NLQRVSGGFGPVIINNRKVIPIPFD--QPEGDIIFLIGDWYTRNHTALRTA 182 (595)
Q Consensus 109 ~PG~~~tY~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~~~~~--~~d~e~~l~l~d~~~~~~~~~~~~ 182 (595)
+||++|+|+|++.+++||||||||. +.|+.+||+|+|||+++.....+++ ...+|++|+|+||+++.+.++...
T Consensus 92 ~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~ 171 (488)
T 3od3_A 92 PPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQ 171 (488)
T ss_dssp CTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCC
T ss_pred cCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceecc
Confidence 9999999999996558999999996 6899999999999999765333322 234689999999999754332100
Q ss_pred Hh--cCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEE-eCccceeeeccCccc
Q 007635 183 LD--SGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRI-QNHNLLLVETEGHYT 259 (595)
Q Consensus 183 ~~--~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~vi~~DG~~~ 259 (595)
.+ .......+|.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+||++||.++
T Consensus 172 ~~~~~~~~g~~gd~~lvNG~~~--------------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l 236 (488)
T 3od3_A 172 LDVMTAAVGWFGDTLLTNGAIY--------------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLL 236 (488)
T ss_dssp CSHHHHHHCCCCSEEEETTBSS--------------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEE
T ss_pred ccccccccCCCCCEEEEcCCcC--------------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcc
Confidence 00 000124578999999986 66776 5789999999999999999999 699999999999987
Q ss_pred -cceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeeccccc-ccccceeEEEEEecCCCCCCCCCCCCCCCCCCcccc
Q 007635 260 -SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES-FWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWA 337 (595)
Q Consensus 260 -~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~ 337 (595)
+|+.+++|.|+|||||||+|++++ .+ .|++++........ .........+++......+.+..+|..
T Consensus 237 ~~P~~~~~l~l~pGeR~dvlv~~~~-~~-~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~--------- 305 (488)
T 3od3_A 237 PEPVKVSELPVLMGERFEVLVEVND-NK-PFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDT--------- 305 (488)
T ss_dssp EEEEEESCEEECTTCEEEEEEEECT-TC-CEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSC---------
T ss_pred cCccEeceEEECCCCEEEEEEEeCC-Cc-eEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcc---------
Confidence 699999999999999999999995 44 89998754321110 000011222333321110111112210
Q ss_pred ccCccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCC-------------------C-c--------ccCCe---
Q 007635 338 AMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLP-------------------P-V--------TIDGK--- 386 (595)
Q Consensus 338 ~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~-------------------~-~--------~~~g~--- 386 (595)
+.. .. +.|.. ....+|++.+.... . . ...|.
T Consensus 306 -L~~----------~~--~~~~~-----~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 367 (488)
T 3od3_A 306 -LSS----------LP--ALPSL-----EGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNH 367 (488)
T ss_dssp -CCC----------CC--CCCCC-----TTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCC
T ss_pred -ccc----------CC--CCccc-----ccccceEEEEEecccccccccccccccccccccccccccccccccccCcccc
Confidence 000 00 00000 01124555542210 0 0 00110
Q ss_pred ----------EEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecCCcEEEEEEecCC-CCce
Q 007635 387 ----------VRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNND-TKMQ 455 (595)
Q Consensus 387 ----------~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~-~~~H 455 (595)
..|+|||++|... . ..+.++.|++++|.|.|.+ .+.|
T Consensus 368 ~~~g~~~~~~~~~~ING~~~~~~-~-------------------------------~~~~~~~G~~e~w~l~N~~~~~~H 415 (488)
T 3od3_A 368 MNHGGKFDFHHANKINGQAFDMN-K-------------------------------PMFAAAKGQYERWVISGVGDMMLH 415 (488)
T ss_dssp SCCCGGGCGGGCEEETTBCCCTT-C-------------------------------CSEECCBSSCEEEEEECTTCCCCE
T ss_pred ccccccccccceeeECCeeCCCC-C-------------------------------CceEcCCCCEEEEEEEeCCCCCCc
Confidence 1379999987421 1 1145789999999999987 5689
Q ss_pred eeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeC----CceeeeeeeccccceeccceeEE
Q 007635 456 SFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLD----NVGVWNLRVENLDRWYLGQETYM 531 (595)
Q Consensus 456 P~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~ad----NpG~W~~HCHil~h~~~Gm~~~~ 531 (595)
||||||++|+|++++..... ..++.|||||.|+ ++++.|+|++| |||.||||||+++|++.|||..|
T Consensus 416 p~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f 486 (488)
T 3od3_A 416 PFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGF 486 (488)
T ss_dssp EEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEE
T ss_pred cEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEE
Confidence 99999999999998643221 1236899999999 99999999974 57899999999999999999998
Q ss_pred EE
Q 007635 532 KI 533 (595)
Q Consensus 532 ~V 533 (595)
+|
T Consensus 487 ~V 488 (488)
T 3od3_A 487 TV 488 (488)
T ss_dssp EC
T ss_pred EC
Confidence 76
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=2.1e-76 Score=654.92 Aligned_cols=447 Identities=13% Similarity=0.125 Sum_probs=319.2
Q ss_pred CceEEEEEEEEEEEeC--CCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCC-----------------------
Q 007635 28 DDTIFYDFKVSYITAS--PLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDES----------------------- 82 (595)
Q Consensus 28 ~~~~~~~~~v~~~~~~--~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~----------------------- 82 (595)
...++|+|++++.... +++.++++|+|||++|||+|++++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 4468999999999875 445689999999999999999999999999999999853
Q ss_pred ------------------ceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccch----hhhccC
Q 007635 83 ------------------LLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN----LQRVSG 140 (595)
Q Consensus 83 ------------------~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~----~q~~~G 140 (595)
+++||||+++.+ .+||++ ||+|+||++|+|+|++.+++||||||||.. .|+.+|
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~--~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~G 185 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAG 185 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCC--ccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhcc
Confidence 899999999864 589987 899999999999999966799999999975 499999
Q ss_pred ccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHHH--HH-------HHhc---C-C----CCCCCceEEEccCCCC
Q 007635 141 GFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTAL--RT-------ALDS---G-K----DLDMPDGVLINGKGPY 203 (595)
Q Consensus 141 l~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~--~~-------~~~~---~-~----~~~~~d~~liNG~~~~ 203 (595)
|+|+|||+++.+.+.++..+|+|++|+|+||+++.+.+. .. .+.. + . ....+|.+||||+.+
T Consensus 186 L~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~- 264 (612)
T 2g23_A 186 LYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW- 264 (612)
T ss_dssp CEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES-
T ss_pred ceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC-
Confidence 999999999765444445679999999999999754211 00 0010 1 0 124579999999996
Q ss_pred CCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCc-------cceeeeccCcccc-ceeec------EEEE
Q 007635 204 RYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH-------NLLLVETEGHYTS-QQNYT------SFEI 269 (595)
Q Consensus 204 ~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~vi~~DG~~~~-p~~~~------~l~i 269 (595)
+.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||.+++ |+.++ +|.|
T Consensus 265 -------------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l 330 (612)
T 2g23_A 265 -------------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSA 330 (612)
T ss_dssp -------------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEE
T ss_pred -------------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEE
Confidence 89999999 9999999999999999999999 8999999999995 99999 9999
Q ss_pred cCCcEEEEEEEcCCCCCcceEEEEeeeccccccc---ccceeEEEEEecCCCC--CCCCCCCCCCCC-CCccccccCccc
Q 007635 270 HVGQSYSFLVTMDQNASSDYYIVASARFVNESFW---QRVTGVAILHYSNSKG--AASGPLPEAPSD-IYNQWAAMTQPR 343 (595)
Q Consensus 270 ~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~---~~~~~~~il~y~~~~~--~~~~~~p~~~p~-~~~~~~~~~~~~ 343 (595)
+|||||||+|++++.+|++|+|+........... .......++++..... ..+..+|..... ...........+
T Consensus 331 ~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~ 410 (612)
T 2g23_A 331 APAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGH 410 (612)
T ss_dssp CTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEE
T ss_pred CCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccce
Confidence 9999999999999877768999875421111000 0011123555543221 111122221100 000000000000
Q ss_pred cccccCCCCCCCCCCCCCCCcCccceeeEEEEecCC-------C-------cccCC-eEEEEecCeeccCCCChhhhhhc
Q 007635 344 SIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLP-------P-------VTIDG-KVRSTLNGISFVKPETPIRLADK 408 (595)
Q Consensus 344 ~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~-------~-------~~~~g-~~~~~iNg~s~~~p~~P~l~~~~ 408 (595)
.+.. +.+ |.. .+...-.+.+.+.... + ...+| ...|+|||+.|.+
T Consensus 411 r~~~-~~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~---------- 470 (612)
T 2g23_A 411 RLIV-LTP------PGT---KGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFND---------- 470 (612)
T ss_dssp EEEE-ECC------TTC---TTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS----------
T ss_pred eEEe-ecc------ccc---cccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCC----------
Confidence 0000 000 000 0000000111111000 0 00122 2346677776531
Q ss_pred ccCCCcccCCCCCCCCCCCCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccC---CC--------
Q 007635 409 YNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWT---ES-------- 477 (595)
Q Consensus 409 ~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~---~~-------- 477 (595)
...+.++.|++|+|+|.|.+.+.|||||||+.|+|++++.+.++ ..
T Consensus 471 -----------------------~~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~ 527 (612)
T 2g23_A 471 -----------------------GLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPV 527 (612)
T ss_dssp -----------------------CCCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCE
T ss_pred -----------------------CCceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCccccc
Confidence 12256789999999999999899999999999999998643221 10
Q ss_pred -----CCCCCCcCCCCcccEEEECCCcEEEEEEEeC-CceeeeeeeccccceeccceeEEEEeCC
Q 007635 478 -----NRNSYNKWDAISKCTTEVYPGAWTAILVSLD-NVGVWNLRVENLDRWYLGQETYMKIVNP 536 (595)
Q Consensus 478 -----~~~~~n~~~p~~RDTv~v~p~g~~~Irf~ad-NpG~W~~HCHil~h~~~Gm~~~~~V~~~ 536 (595)
....++..++.|||||.|+|+++++|+|++| |||.|+|||||++|++.|||..|.|...
T Consensus 528 ~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~ 592 (612)
T 2g23_A 528 RLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPP 592 (612)
T ss_dssp EEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECH
T ss_pred ccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECch
Confidence 0123455667899999999999999999999 9999999999999999999999999854
No 18
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.9e-56 Score=525.86 Aligned_cols=393 Identities=12% Similarity=0.138 Sum_probs=276.0
Q ss_pred hhcccccCceEEEEEEEEEEEe--CCCC--------------------------eeEEEE-------EECCC--------
Q 007635 21 SSLCFAEDDTIFYDFKVSYITA--SPLG--------------------------VPQQVI-------AINGK-------- 57 (595)
Q Consensus 21 ~~~~~~~~~~~~~~~~v~~~~~--~~dG--------------------------~~~~~~-------~~Ng~-------- 57 (595)
+++..+.+.+|+|.+.|.+..+ +|.| +.++++ .||+.
T Consensus 12 ~~~~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 91 (1065)
T 2j5w_A 12 LCSTPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLG 91 (1065)
T ss_dssp --------CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGT
T ss_pred HhccccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccC
Confidence 3445566779999999999875 3333 233444 57777
Q ss_pred CCCceEEecCCCEEEEEEEeCCCCCceeecCCCccC----CCCCCCCCCC---CCCccCCCCeEEEEEEecCc-------
Q 007635 58 FPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMR----RNSWQDGVQG---TNCPIPSQWNWTYQFQVKDQ------- 123 (595)
Q Consensus 58 ~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DGv~~---tq~~I~PG~~~tY~f~~~~~------- 123 (595)
+|||+||+++||+|+|+|+|+|+++++|||||++++ +.+|+||+++ |||+|+||++|+|+|+++++
T Consensus 92 ~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d 171 (1065)
T 2j5w_A 92 FLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGD 171 (1065)
T ss_dssp TSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTS
T ss_pred CcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCC
Confidence 999999999999999999999999999999999987 6688999884 89999999999999999754
Q ss_pred --eeeeEEeccchhh--hccCccccEEEccCCCCCCCCC-CCCCceeEeee------ecccccHHHHHHHH-hcCCC---
Q 007635 124 --IGSFFYFPSLNLQ--RVSGGFGPVIINNRKVIPIPFD-QPEGDIIFLIG------DWYTRNHTALRTAL-DSGKD--- 188 (595)
Q Consensus 124 --~Gt~wYH~H~~~q--~~~Gl~G~liV~~~~~~~~~~~-~~d~e~~l~l~------d~~~~~~~~~~~~~-~~~~~--- 188 (595)
+||||||||...| +++||+|+|||++++....|.. .+|+|++|+++ ||++... +...+ +.+..
T Consensus 172 ~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~~ 249 (1065)
T 2j5w_A 172 GNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDKD 249 (1065)
T ss_dssp CSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCTT
T ss_pred CCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCccccccc
Confidence 5999999998754 6799999999999875443332 46889999999 5666422 12221 11100
Q ss_pred -C---CCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCC-ceEEEEEeCccceeeeccCcccccee
Q 007635 189 -L---DMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQQN 263 (595)
Q Consensus 189 -~---~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~vi~~DG~~~~p~~ 263 (595)
. ..++.++|||+.. ++.+.++|++|++|||||+|+|.. ..+.|||+||.|+ ++|..
T Consensus 250 ~~~~~~~~~~~~iNG~~~-----------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~ 310 (1065)
T 2j5w_A 250 NEDFQQSNRMYSVNGYTF-----------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYR 310 (1065)
T ss_dssp CHHHHHHTEEEEETTEET-----------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEE
T ss_pred cccccccCcEEEECCccC-----------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCee
Confidence 0 0235799999985 124789999999999999999986 6899999999999 35778
Q ss_pred ecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccc
Q 007635 264 YTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPR 343 (595)
Q Consensus 264 ~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~ 343 (595)
+|++.|+|||||||+|++++ +| +|+|+++...... ....+.++|.+...+++.+.|. .+ ....+ +.+++
T Consensus 311 ~dtv~I~pGer~dVlv~~~~-pG-~y~i~~h~~~h~~-----~Gm~~~~~V~~~~~~~~~~~~~-g~--~~~~~-~i~A~ 379 (1065)
T 2j5w_A 311 IDTINLFPATLFDAYMVAQN-PG-EWMLSCQNLNHLK-----AGLQAFFQVQECNKSSSKDNIR-GK--HVRHY-YIAAE 379 (1065)
T ss_dssp ESEEEECBTCEEEEEEECCS-CE-EEEEEECSHHHHH-----TTCEEEEEEECSCCCCCCCCCT-TS--EEEEE-EEEEE
T ss_pred ecEEEECCCcEEEEEEEeCC-Ce-eEEEEecCcchhh-----CCCEEEEEEecCCCcccccccc-cc--ceeEE-EEece
Confidence 99999999999999999997 67 9999998753322 2456788887655433333332 11 01222 34677
Q ss_pred cccccCCCCCC------CCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccC
Q 007635 344 SIRQNTSASGA------RPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKL 417 (595)
Q Consensus 344 ~~~~~l~~~~~------~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~ 417 (595)
.+.|+..+... .+++++++ ...+ |..... .++++.+-.++ ++|.+ +.|+.
T Consensus 380 e~~wdy~~~~~~~~~~~~~~~~~s~-------~~~~-l~~~~~-~ig~~y~k~v~-~~y~d--------------~~f~~ 435 (1065)
T 2j5w_A 380 EIIWNYAPSGIDIFTKENLTAPGSD-------SAVF-FEQGTT-RIGGSYKKLVY-REYTD--------------ASFTN 435 (1065)
T ss_dssp EEEEESCTTSBCTTTCCBTTCTTCT-------THHH-HCCBTT-BCCSEEEEEEE-EEESS--------------TTCCS
T ss_pred ecccccCCCCcccccccccCCCccc-------chhh-hccCCc-ccCceEeeeee-ecccC--------------CceEE
Confidence 78888886643 33444432 1112 222111 34555555555 55532 23332
Q ss_pred CCCCCCCCCCCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEee
Q 007635 418 DFPNKPLTRPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGM 469 (595)
Q Consensus 418 ~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~ 469 (595)
+.+..|.......-.+++.++.|++|+++|+|.....|+||+||+.|++++.
T Consensus 436 ~~~~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~ 487 (1065)
T 2j5w_A 436 RKERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNE 487 (1065)
T ss_dssp BCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGC
T ss_pred cCcCCcccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccCC
Confidence 2222221111122346899999999999999999999999999999997764
No 19
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=3e-53 Score=437.75 Aligned_cols=270 Identities=20% Similarity=0.310 Sum_probs=224.9
Q ss_pred ceEEEEEEEEEEEeCC-CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCC-CCC
Q 007635 29 DTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNC 106 (595)
Q Consensus 29 ~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~ 106 (595)
++|+|+|++++..+.+ +|..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++.+++++||+|+ |||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999877 58899999999999999999999999999999999999999999999998889999998 999
Q ss_pred ccCCCCeEEEEEEecCceeeeEEeccchhhh---ccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHHHHHHH
Q 007635 107 PIPSQWNWTYQFQVKDQIGSFFYFPSLNLQR---VSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTAL 183 (595)
Q Consensus 107 ~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~---~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 183 (595)
+|+||++++|+|++ +++||||||||...+. .+||+|+|||+++...+.+. .+|+|++|+++||+++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~~---~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANKP---G 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTCT---T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccccc---c
Confidence 99999999999999 5899999999987554 48999999999865422111 458999999999998632211 1
Q ss_pred hcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccc-cce
Q 007635 184 DSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT-SQQ 262 (595)
Q Consensus 184 ~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~-~p~ 262 (595)
..+.....++.++|||+.++. ...+++++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|.
T Consensus 156 ~~~~~~~~~d~~~ING~~~~~-----------~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~ 223 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKSFPE-----------TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPI 223 (318)
T ss_dssp CCCCTTCCCCEEEETTBCBTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEE
T ss_pred cCCCCCCcCcEEEEcCcCCCC-----------CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCc
Confidence 112223357899999998632 2459999999999999999976 799999999999999999988 588
Q ss_pred eecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeeccccc-ccccceeEEEEEecCC
Q 007635 263 NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNES-FWQRVTGVAILHYSNS 317 (595)
Q Consensus 263 ~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~-~~~~~~~~~il~y~~~ 317 (595)
..|++.|.||||++|++++++ +| .|.++++....... ........++|+|++.
T Consensus 224 ~~dtv~l~pger~~v~~~a~~-pG-~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 224 KGDTVLIGPGERYDVILNMDN-PG-LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred cccEEEECCCCEEEEEEECCC-Ce-eEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 999999999999999999994 68 89998886532210 0011345688999875
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=6e-52 Score=432.58 Aligned_cols=271 Identities=19% Similarity=0.411 Sum_probs=224.4
Q ss_pred ceEEEEEEEEEEEeCCC-CeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCC-CCC
Q 007635 29 DTIFYDFKVSYITASPL-GVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNC 106 (595)
Q Consensus 29 ~~~~~~~~v~~~~~~~d-G~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~ 106 (595)
.+++|+|++++..+.++ |+++.+|+|||++|||+|+|++||+|+|+|+|.++++++|||||+++.+++|+||+|+ +||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 36899999999998874 9999999999999999999999999999999999999999999999999999999998 999
Q ss_pred ccCCCCeEEEEEEecCceeeeEEeccchh--hhc-cCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHHHHHHH
Q 007635 107 PIPSQWNWTYQFQVKDQIGSFFYFPSLNL--QRV-SGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTAL 183 (595)
Q Consensus 107 ~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~--q~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 183 (595)
+|+||++|+|+|++ +++||||||||... |+. +||+|+|||+++.....+. ..|+|++++++||++...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~~~---~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVADKY---G 156 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTTCT---T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheeccccccc---C
Confidence 99999999999999 48999999999765 888 9999999999865422111 357899999999987421100 0
Q ss_pred hcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCcccc-ce
Q 007635 184 DSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTS-QQ 262 (595)
Q Consensus 184 ~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~-p~ 262 (595)
..+.....++.++|||+.++. ...+++++|++|||||+|++.. .+.|||+||.|+||+.||.+++ |.
T Consensus 157 ~~g~~~~~~~~~~ING~~~~~-----------~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~ 224 (339)
T 2zwn_A 157 EGGTPMNVADYFSVNAKSFPL-----------TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPY 224 (339)
T ss_dssp CCCSTTSCCCEEEETTBCTTS-----------SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEE
T ss_pred CCCCCccccceEEEccccCCC-----------cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCc
Confidence 011122257899999998631 2569999999999999999965 8999999999999999999986 88
Q ss_pred eecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeeccc-ccccccceeEEEEEecCCC
Q 007635 263 NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVN-ESFWQRVTGVAILHYSNSK 318 (595)
Q Consensus 263 ~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~-~~~~~~~~~~~il~y~~~~ 318 (595)
..|++.|.||||++|+|++++ +| .|.++++..... ..........++|+|.+..
T Consensus 225 ~~dtv~l~pg~r~~v~~~~~~-pG-~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 225 YADTVLVSPGERYDVIIEADN-PG-RFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EESEEEECTTCEEEEEEECCS-CS-EEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEECCCCEEEEEEEeCC-Ce-eEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 899999999999999999985 68 788888765321 1000123347899998753
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.4e-54 Score=490.47 Aligned_cols=239 Identities=15% Similarity=0.186 Sum_probs=181.2
Q ss_pred EEEEEEEEeCCC-CeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccC----CCCCCCCCC---CCC
Q 007635 34 DFKVSYITASPL-GVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMR----RNSWQDGVQ---GTN 105 (595)
Q Consensus 34 ~~~v~~~~~~~d-G~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~----~~~~~DGv~---~tq 105 (595)
.+++++++.... |..++.|+ ++|||+|||++||+|+|+|+|+|++++||||||+++. +.+++||++ .||
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq 126 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKED 126 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCccccccc
Confidence 455555444443 66666554 8999999999999999999999999999999999974 566667665 389
Q ss_pred CccCCCCeEEEEEEecC---------ceeeeEEeccchh--hhccCccccEEEccCCCCCCCCCCCCCceeEeeee----
Q 007635 106 CPIPSQWNWTYQFQVKD---------QIGSFFYFPSLNL--QRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGD---- 170 (595)
Q Consensus 106 ~~I~PG~~~tY~f~~~~---------~~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d---- 170 (595)
|+|+||++|+|+|++++ ++||||||||... |+.+||+|+|||+++...........+|+++++++
T Consensus 127 ~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~ 206 (742)
T 2r7e_A 127 DKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEG 206 (742)
T ss_dssp SSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCS
T ss_pred CcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCC
Confidence 99999999999999964 4699999999875 89999999999999765322211123788888753
Q ss_pred --cccccHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCc-eEEEEEeCc
Q 007635 171 --WYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTST-SLNFRIQNH 247 (595)
Q Consensus 171 --~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh 247 (595)
|+++........+........++.++|||+.. ++.+.+++++|++|||||+|+|... .+.|||+||
T Consensus 207 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~-----------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh 275 (742)
T 2r7e_A 207 KSWHSETKNSLMQDRDAASARAWPKMHTVNGYVN-----------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGH 275 (742)
T ss_dssp SSSCCCCCC-------CCSCCCCCCCCEETTBCT-----------BCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTC
T ss_pred ccccccccccccccCCCccccccCceEEECCccC-----------CCCcceEEcCCCEEEEEEEeCCCCCcceEEEECCC
Confidence 66543211100111111122357789999985 2347799999999999999999875 789999999
Q ss_pred cceeeeccCccccceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeee
Q 007635 248 NLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (595)
Q Consensus 248 ~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~ 296 (595)
.|+|++. ..|++.|.|||+++|++++++ +| .|.++++..
T Consensus 276 ~f~Vvg~--------~~Dtv~v~Pg~~~~v~~~~~~-pG-~w~~hCH~~ 314 (742)
T 2r7e_A 276 TFLVRNH--------RQASLEISPITFLTAQTLLMD-LG-QFLLFCHIS 314 (742)
T ss_dssp CCEETTE--------ECCSCCCCTTCCCEEEECCCS-CS-EECCCCCSS
T ss_pred EEEEEeE--------ecceEEeCCCcEEEEEEEeCC-Ce-eEEEEeCCh
Confidence 9999852 367888999999999999985 67 888877653
No 22
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=4.6e-49 Score=408.79 Aligned_cols=263 Identities=17% Similarity=0.247 Sum_probs=221.8
Q ss_pred cccCceEEEEEEEEEEEeCC-CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCC--CCceeecCCCccCCCCCCCCC
Q 007635 25 FAEDDTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD--ESLLMTWPGIQMRRNSWQDGV 101 (595)
Q Consensus 25 ~~~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv 101 (595)
.+.+++++|+|++++..+++ ||.++.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+. .+||+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCC
Confidence 45567899999999999887 799999999999999999999999999999999996 58999999995 36887
Q ss_pred CCCCCccCCCCeEEEEEEecCceeeeEEeccc---hhhhccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHH
Q 007635 102 QGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL---NLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA 178 (595)
Q Consensus 102 ~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~---~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~ 178 (595)
+. +..|.||++++|+|++ +++||||||||. +.|+.+||+|+|||++++.. +.+|+|++++++||+++....
T Consensus 108 ~~-~~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~----p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 108 AA-ATFTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL----PKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TT-TTCBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Cc-ceeecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCC----CCCceEEEEEeeeeeccCccc
Confidence 75 2359999999999999 589999999996 68999999999999986532 245899999999999874210
Q ss_pred --------HHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccce
Q 007635 179 --------LRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLL 250 (595)
Q Consensus 179 --------~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 250 (595)
+.... ...++.++|||+.++++ ..+.+++++|++|||||+|+|....+.||++||+|+
T Consensus 182 ~~g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~ 247 (327)
T 1kbv_A 182 AQGLQPFDMDKAV-----AEQPEYVVFNGHVGALT---------GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFD 247 (327)
T ss_dssp CCEEECBCHHHHH-----HTCCSEEEETTSTTTTS---------GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBS
T ss_pred cccccccChhHhc-----cCCCceEEEcCcccCCC---------CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEE
Confidence 11111 13468999999997542 126799999999999999999988999999999999
Q ss_pred eeeccCccccceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCC
Q 007635 251 LVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (595)
Q Consensus 251 vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 318 (595)
||+.||.+++|..++++.|+||||+||+|++++ +| +|+|+++...... .....++|+|++..
T Consensus 248 vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG-~y~l~~h~~~~~~----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 248 KVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PG-NYTLVDHSIFRAF----NKGALGQLKVEGAE 309 (327)
T ss_dssp EEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CE-EEEEEESSTHHHH----HSSCEEEEEEESCC
T ss_pred EEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-Ce-EEEEEeccccccc----cCCcEEEEEECCCC
Confidence 999999999999999999999999999999995 68 9999997654311 13468999998753
No 23
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=6.5e-49 Score=425.93 Aligned_cols=401 Identities=15% Similarity=0.082 Sum_probs=263.5
Q ss_pred ccCceEEEEEEEEEEEeCCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCC
Q 007635 26 AEDDTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTN 105 (595)
Q Consensus 26 ~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 105 (595)
+.+.+++++++++...+..+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .++
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~----------~~~ 89 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA----------RSA 89 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE----------ECC
T ss_pred CCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc----------ccc
Confidence 344556666666554444443 467999999 999999999999999999998889999999732 157
Q ss_pred CccCCCCeEEEEEEecCceeeeEEeccchhhhccCccccEEEccCCCCCCCCC-----CCCCceeEeeeecccccHH--H
Q 007635 106 CPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFD-----QPEGDIIFLIGDWYTRNHT--A 178 (595)
Q Consensus 106 ~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~-----~~d~e~~l~l~d~~~~~~~--~ 178 (595)
|+|.||++++|.|++. ++||||||||...|+.+||+|.|+|+++.......+ ....+++..+ |+...... .
T Consensus 90 ~~i~pG~~~~~~f~~~-~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~ 167 (447)
T 2dv6_A 90 IVNGKNASSTFSFVAS-KVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRID 167 (447)
T ss_dssp CBCSTTBEEEEEEECC-SCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEE
T ss_pred eecCCCCeEEEEEEcC-CCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEE
Confidence 9999999999999995 799999999999999999999999998654221000 0011111111 11110000 0
Q ss_pred HH-HHHhcCC-CCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCC-CceEEEEEeCccceeeecc
Q 007635 179 LR-TALDSGK-DLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGT-STSLNFRIQNHNLLLVETE 255 (595)
Q Consensus 179 ~~-~~~~~~~-~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~vi~~D 255 (595)
+. ....... .....+.++|||+.. .|.+++++|++|||||+|.+. ...+.+++||. ++.|
T Consensus 168 l~~~~~~~~~~~g~~~~~~~~NG~~p-------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~D 230 (447)
T 2dv6_A 168 LETVEVKGQLDDNTTYTYWTFNGKVP-------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPG 230 (447)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTBBS-------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGG
T ss_pred EEEEEEEEeccCCceeEEEEECCccC-------------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCC
Confidence 00 0000000 012246789999863 388999999999999999986 34566666663 3679
Q ss_pred CccccceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCcc
Q 007635 256 GHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQ 335 (595)
Q Consensus 256 G~~~~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~ 335 (595)
|.+ +.+.|.||||+++++++++ +| +||++++....... ......+.+.|.... .+|. . +.
T Consensus 231 G~~------~~~~i~pG~~~~~~~~~~~-~G-~~~yh~h~~~~~~~--~~~Gl~g~l~v~~~~-----~~P~----~-d~ 290 (447)
T 2dv6_A 231 GAA------AFTQTDPGEETVVTFKALI-PG-IYVYHCATPSVPTH--ITNGMYGLLLVEPEG-----GLPQ----V-DR 290 (447)
T ss_dssp GGG------GGCCBCTTCEEEEEEECCS-CE-EEEEECCSSSHHHH--HHTTCEEEEEEECTT-----CSCC----C-SE
T ss_pred CCC------ccEEeCCCCEEEEEEECCC-Ce-EEEEEeCCCChHHH--HhCCCEEEEEEeCCC-----CCCC----C-Ce
Confidence 873 2346999999999999985 57 99999875311000 012235666665432 1221 1 11
Q ss_pred ccccCccccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcc
Q 007635 336 WAAMTQPRSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAY 415 (595)
Q Consensus 336 ~~~~~~~~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~ 415 (595)
+..+.. -++..... ....+ ... +..... .......|.|||+.+...
T Consensus 291 ~~~~~~---~~~~~~~~---~~~~g-----~~~----~~~~~~---~~~~~~~~~iNG~~~~~~---------------- 336 (447)
T 2dv6_A 291 EFYVMQ---GEIYTVKS---FGTSG-----EQE----MDYEKL---INEKPEYFLFNGSVGSLT---------------- 336 (447)
T ss_dssp EEEEEE---EEECBSSC---TTCCE-----ECC----BBHHHH---HTTCCSEEEETTSTTCCC----------------
T ss_pred eEEEEe---cccccCCc---ccccc-----ccc----CChHHh---hccCCCEEEECCcccCCC----------------
Confidence 110000 01111000 00000 000 000000 011123688999865210
Q ss_pred cCCCCCCCCCCCCCCceeeeeecCCcEEEEEEecCC-CCceeeeecCceEEEEeecccccCCCCCCCCCcCCCC-cccEE
Q 007635 416 KLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNND-TKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAI-SKCTT 493 (595)
Q Consensus 416 ~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~-~RDTv 493 (595)
....+.++.|++++|+|.|.+ ...||||||||+|+||+.+++.. ..|. +|||+
T Consensus 337 ---------------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~----------~~p~~~~dtv 391 (447)
T 2dv6_A 337 ---------------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVV----------SPPLIGVQTV 391 (447)
T ss_dssp ---------------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSS----------SCCEEEESEE
T ss_pred ---------------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCccc----------CCCcccccEE
Confidence 013467889999999999987 46899999999999999964321 1244 69999
Q ss_pred EECCCcEEEEEEEeCCceeeeeeeccccceeccceeEEEEeCCCC
Q 007635 494 EVYPGAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPEE 538 (595)
Q Consensus 494 ~v~p~g~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~~ 538 (595)
.|+|+++++|+|++||||.|+||||+++|...||+..++|..+..
T Consensus 392 ~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 392 SVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp EECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred EECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 999999999999999999999999999999999999999975543
No 24
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=5.4e-47 Score=386.33 Aligned_cols=235 Identities=17% Similarity=0.227 Sum_probs=204.8
Q ss_pred ceEEEEEEEEEEEeCC-CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCC-CCC
Q 007635 29 DTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNC 106 (595)
Q Consensus 29 ~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~ 106 (595)
..++|+|++++..+.. +|..+.+|+|||++|||+|++++||+|+|+|+|+++++++|||||++ .+++||+|+ +||
T Consensus 33 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~---~~~~DG~p~~~~~ 109 (288)
T 3gdc_A 33 TLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVH---RATMDGTPGIGAG 109 (288)
T ss_dssp EEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCC---CGGGSCCTTSTTC
T ss_pred cEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEecccc---ccccCCCCCccce
Confidence 4689999999988765 49999999999999999999999999999999999999999999997 368999998 999
Q ss_pred ccCCCCeEEEEEEecCceeeeEEeccch---hhhccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHHHHHHH
Q 007635 107 PIPSQWNWTYQFQVKDQIGSFFYFPSLN---LQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTAL 183 (595)
Q Consensus 107 ~I~PG~~~tY~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 183 (595)
+|+||++++|+|++ +++||||||||.. .|+.+||+|+|||+++...+ ..|+|++|+++||+.++
T Consensus 110 ~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~-------- 176 (288)
T 3gdc_A 110 SIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG-------- 176 (288)
T ss_dssp SBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS--------
T ss_pred eECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC--------
Confidence 99999999999999 6899999999986 68999999999999876532 34789999999999862
Q ss_pred hcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCc-eEEEEEeCccceeeeccCccccce
Q 007635 184 DSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTST-SLNFRIQNHNLLLVETEGHYTSQQ 262 (595)
Q Consensus 184 ~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~vi~~DG~~~~p~ 262 (595)
+ ..++.++|||+.+.+ ..+.+++++|++|||||+|++... .+.|||+||.|+|++.++....+.
T Consensus 177 --g---~~~~~~~iNG~~~~~----------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~ 241 (288)
T 3gdc_A 177 --G---DDNEFYSVNGLPFHF----------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSE 241 (288)
T ss_dssp --T---TCCSEEEETTSTTHH----------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSE
T ss_pred --C---CCcceEEECcccccc----------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCc
Confidence 1 246799999998621 124689999999999999999654 799999999999998555444578
Q ss_pred eecEEEEcCCcEEEEEEEcCCCCCcceEEEEeee
Q 007635 263 NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (595)
Q Consensus 263 ~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~ 296 (595)
..|++.|.||||++|+++++ .+| .|.++++..
T Consensus 242 ~~Dtv~v~pg~~~~v~~~~~-~pG-~~~~hCH~~ 273 (288)
T 3gdc_A 242 YTDTISQVQGQRGILELRFP-YPG-KFMFHAHKT 273 (288)
T ss_dssp EESEEEEETTCEEEEEECCC-SCE-EEEEECSSH
T ss_pred eeeEEEeCCCceEEEEEECC-CCE-EEEEEecCh
Confidence 89999999999999999998 568 898888653
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.1e-48 Score=461.20 Aligned_cols=411 Identities=13% Similarity=0.089 Sum_probs=267.8
Q ss_pred eeEEEEEECCCCCC--ceEEecCCCEEEEEEEeCCCCCceeecCCCccCC-CCCCCCCCC-CCCccCCCCeEEEEEEecC
Q 007635 47 VPQQVIAINGKFPG--AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRR-NSWQDGVQG-TNCPIPSQWNWTYQFQVKD 122 (595)
Q Consensus 47 ~~~~~~~~Ng~~PG--P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~-~~~~DGv~~-tq~~I~PG~~~tY~f~~~~ 122 (595)
..+.+.+|||++|| |+|++++||+|+++|.|. .+.+||||++|.+ +.|+||++. | |+|.||.+++|+|++ +
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 57899999999999 889999999999999976 5569999999999 999999997 7 999999999999999 5
Q ss_pred ceeeeEEeccchhhhccCccccEEEccCCCCCCCCCCCCCceeEee----eecccccHHHHHHHH-hcCCCCCCCceEEE
Q 007635 123 QIGSFFYFPSLNLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLI----GDWYTRNHTALRTAL-DSGKDLDMPDGVLI 197 (595)
Q Consensus 123 ~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l----~d~~~~~~~~~~~~~-~~~~~~~~~d~~li 197 (595)
++||||||||.+.|+.+||+|.++|++......+...+|.|.+++| +||++.....+...+ ..... .|..+++
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~--~p~~~~~ 768 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ--NVSNAFL 768 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC--CCCCTTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc--Cccceee
Confidence 9999999999999999999999999987543344336688999999 899998665443211 11111 2667777
Q ss_pred ccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCcccee----------eeccCccccceeecEE
Q 007635 198 NGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLL----------VETEGHYTSQQNYTSF 267 (595)
Q Consensus 198 NG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v----------i~~DG~~~~p~~~~~l 267 (595)
|+... .+ |++|++ ...+.+.+|+|++ +++|| .+|
T Consensus 769 n~~~~---------------~i----G~tY~k---------~~y~~~~d~tft~~~~r~~~~~~v~~pG--------P~I 812 (1065)
T 2j5w_A 769 DKGEF---------------YI----GSKYKK---------VVYRQYTDSTFRVPVERKAEEEHLGILG--------PQL 812 (1065)
T ss_dssp CCTTT---------------CC----CSEEEE---------EEEEEESSTTCCSBCCCCGGGGGGTTSC--------CCE
T ss_pred cCCCc---------------cc----cceEee---------eEEEEEcCCcceecccCCccccccCCCC--------CEE
Confidence 87653 12 899998 3557889999998 66777 479
Q ss_pred EEcCCcEEEEEEEcCCCCCcceEEEEeeeccc-----ccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCc-
Q 007635 268 EIHVGQSYSFLVTMDQNASSDYYIVASARFVN-----ESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQ- 341 (595)
Q Consensus 268 ~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~-----~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~- 341 (595)
.+.+|||++|.++-+ .+. .|.|+.+..... ...+.....+....|+. .++.+. .|. +..+-+..
T Consensus 813 ~v~~Gd~v~v~l~N~-~~~-~~sih~HGl~~~~~~~~~i~PG~~~ty~~~~~~~-----~gp~~~-~~~--~gt~wYhsh 882 (1065)
T 2j5w_A 813 HADVGDKVKIIFKNM-ATR-PYSIHAHGVQTESSTVTPTLPGETLTYVWKIPER-----SGAGTE-DSA--CIPWAYYST 882 (1065)
T ss_dssp EEETTEEEEEEEEEC-SSS-CBCCEESSCBCSCSCCCCBCTTCEEEEEEECCGG-----GSCCTT-SCS--EEEEEEECC
T ss_pred EEecCCEEEEEEEeC-CCC-CceEeeccccccCCCCceeCCCCeEEEEEEecCc-----cCCccc-cCC--ceEEEEecC
Confidence 999999999999854 344 888987652111 01111112222222221 112222 110 11110000
Q ss_pred c---ccccccCCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEE--ecCeeccC-C-CChhhhhhcccCCCc
Q 007635 342 P---RSIRQNTSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRST--LNGISFVK-P-ETPIRLADKYNVKGA 414 (595)
Q Consensus 342 ~---~~~~~~l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~--iNg~s~~~-p-~~P~l~~~~~~~~g~ 414 (595)
. +.+...|.. .....+.+.........++++.+.... .++...|. .|+.+|.. | ..+++...+......
T Consensus 883 ~~~~~q~~~GL~G-~liV~~~~~l~~~~~~~d~D~~l~~~~---~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~ 958 (1065)
T 2j5w_A 883 VDQVKDLYSGLIG-PLIVCRRPYLKVFNPRRKLEFALLFLV---FDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKM 958 (1065)
T ss_dssp TTHHHHHHTTCEE-EEEEECCC-----CCCCEEEEEEEEEE---EEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEE
T ss_pred CChHHhhhccccc-eeEecCcccccccCCCcceEEEEEEEe---ecCCcceeeccCcccccCCccccCcchhhhhccCce
Confidence 0 000000000 000000000000001122333322110 11111132 24444431 1 122211100000000
Q ss_pred ccCCCCCCCCCCCCCCceeeeeecCCcEEEEEEecCC--CCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccE
Q 007635 415 YKLDFPNKPLTRPPRTDRSLINATYKGFIEIILQNND--TKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCT 492 (595)
Q Consensus 415 ~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve~vl~N~~--~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDT 492 (595)
+ ..|+....++..+.++.|++|+|+|.|.+ ...||||||||.|+|++++ |.+|||
T Consensus 959 ~-------~iNG~~~~~~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p~~~DT 1015 (1065)
T 2j5w_A 959 H-------AINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------VYSSDV 1015 (1065)
T ss_dssp E-------EETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------CEEESE
T ss_pred E-------EECCccCCCCccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------CceeeE
Confidence 0 01111112345678999999999999985 5689999999999999764 689999
Q ss_pred EEECCCcEEEEEEEeCCceeeeeeeccccceeccceeEEEEeCCC
Q 007635 493 TEVYPGAWTAILVSLDNVGVWNLRVENLDRWYLGQETYMKIVNPE 537 (595)
Q Consensus 493 v~v~p~g~~~Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~~~~ 537 (595)
+.|+|+++++|+|++||||.|+||||+++|++.||+..|.|.+.+
T Consensus 1016 v~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1016 FDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp EEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred EEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 999999999999999999999999999999999999999998654
No 26
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=1.6e-45 Score=398.45 Aligned_cols=263 Identities=14% Similarity=0.226 Sum_probs=221.0
Q ss_pred cccCceEEEEEEEEEEEeC-CCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCC--CCceeecCCCccCCCCCCCCC
Q 007635 25 FAEDDTIFYDFKVSYITAS-PLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD--ESLLMTWPGIQMRRNSWQDGV 101 (595)
Q Consensus 25 ~~~~~~~~~~~~v~~~~~~-~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv 101 (595)
++.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||+
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~ 97 (442)
T 2zoo_A 23 RDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGG 97 (442)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCC
Confidence 4566789999999999988 4899999999999999999999999999999999986 499999999964 6887
Q ss_pred CCCCCccCCCCeEEEEEEecCceeeeEEecc---chhhhccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHH
Q 007635 102 QGTNCPIPSQWNWTYQFQVKDQIGSFFYFPS---LNLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA 178 (595)
Q Consensus 102 ~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H---~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~ 178 (595)
+.+ .+|+||++++|+|++ +++|||||||| ...|+.+||+|+|||++++.. ..+|+|++|+++||+++....
T Consensus 98 ~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 98 AES-SFTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred Ccc-EEECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 752 369999999999999 68999999996 568999999999999986532 245899999999999874310
Q ss_pred --------HHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccce
Q 007635 179 --------LRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLL 250 (595)
Q Consensus 179 --------~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 250 (595)
+. .+. ...+++++|||+.... ...+.+++++|++|||||+|+|....+.|||+||.|+
T Consensus 172 ~~~~~~~~~~-~~~----~~~~~~~liNG~~~~~---------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~ 237 (442)
T 2zoo_A 172 EAGLQPFDMA-KAI----DEDADYVVFNGSVGST---------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFD 237 (442)
T ss_dssp CCEEECBCHH-HHH----TTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBS
T ss_pred ccccccCChh-Hhc----cCCCCEEEECCCcCCC---------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEE
Confidence 11 111 2467899999998621 1126799999999999999999988999999999999
Q ss_pred eeeccCccccceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCC
Q 007635 251 LVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (595)
Q Consensus 251 vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 318 (595)
||+.||.+++|..++++.|.||||+||+|++++ +| +|+++++...... .....++++|.+..
T Consensus 238 vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G-~y~~~~~~~~~~~----~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 238 TVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV-PG-TFILVDHSIFRAF----NKGALAMLKVEGPD 299 (442)
T ss_dssp EEEGGGSSCEECSBSEEEECTTEEEEEEEECCS-CE-EEEEEESSTHHHH----TTSCEEEEEEESCC
T ss_pred EEecCCccCCCccceEEEECCCeeEEEEEEcCC-CC-eEEEEeccccccc----ccCceEEEEecCCC
Confidence 999999999999999999999999999999995 67 9999987643310 13568899998754
No 27
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.6e-44 Score=365.91 Aligned_cols=224 Identities=14% Similarity=0.228 Sum_probs=192.5
Q ss_pred ccCceEEEEEEEEEEEeCCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCC
Q 007635 26 AEDDTIFYDFKVSYITASPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTN 105 (595)
Q Consensus 26 ~~~~~~~~~~~v~~~~~~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 105 (595)
+.+.+|+|+|++++. ..+......+.+||++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||++.+|
T Consensus 3 ~~g~~~~~~l~~~~~--~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~--~~~DG~~~t~ 78 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKL--ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 78 (276)
T ss_dssp -CCCEEEEEEEEEEC--TTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CcceEEEEEEEEEeC--CCCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccC--CccCCCcCCc
Confidence 456789999999874 344455567789999999999999999999999999999999999999986 4799999899
Q ss_pred CccCCCCeEEEEEEecC------------ceeeeEEeccch------hhhccCccccEEEccCCCCCCCCCCCCCceeEe
Q 007635 106 CPIPSQWNWTYQFQVKD------------QIGSFFYFPSLN------LQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFL 167 (595)
Q Consensus 106 ~~I~PG~~~tY~f~~~~------------~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~ 167 (595)
|+|+||++|+|+|++++ ++||||||||.. .|+.+||+|+|||+++... ..|+|++|+
T Consensus 79 ~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l~ 153 (276)
T 3kw8_A 79 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 153 (276)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEEE
Confidence 99999999999999963 379999999973 6899999999999997642 138999998
Q ss_pred eeecccccHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCc
Q 007635 168 IGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH 247 (595)
Q Consensus 168 l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 247 (595)
++|| +|||+.+. ..+.++++.|++|||||+|.+.. .+.||+|||
T Consensus 154 l~~~------------------------~iNG~~~~-----------~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~ 197 (276)
T 3kw8_A 154 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 197 (276)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred eccc------------------------ccceeccc-----------CCCCEEEecCCEEEEEEecCCCc-ceeEEEccc
Confidence 8664 89999862 24889999999999999999985 899999999
Q ss_pred cceeeeccCcccc----ceeecEEEEcCCcEEEEEEEcCC--CCCcceEEEEeee
Q 007635 248 NLLLVETEGHYTS----QQNYTSFEIHVGQSYSFLVTMDQ--NASSDYYIVASAR 296 (595)
Q Consensus 248 ~~~vi~~DG~~~~----p~~~~~l~i~pG~R~dvlv~~~~--~~g~~y~i~~~~~ 296 (595)
.|.+++ ||.... +...|++.|.|||++++++++++ .+| .|+++++..
T Consensus 198 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG-~w~~HCH~~ 250 (276)
T 3kw8_A 198 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQ 250 (276)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSH
T ss_pred eeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCC-eEEEECCCc
Confidence 999976 665432 45789999999999999999985 578 999999864
No 28
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=2.5e-44 Score=374.77 Aligned_cols=270 Identities=14% Similarity=0.143 Sum_probs=210.6
Q ss_pred ccccCceEEEEEEEEEEEeCC-CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCC
Q 007635 24 CFAEDDTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ 102 (595)
Q Consensus 24 ~~~~~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 102 (595)
+.+.+.+++|+|++++..+++ +|.++.+|+|||++|||+|++++||+|+|+|+|+ .+++||||+++.+....||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 455667899999999999877 5999999999999999999999999999999999 589999999987655566655
Q ss_pred C-CCCccCCCCeEEEEEEecCceeeeEEeccch-----hhhccCccccEEEccCCCCC----CCCCCCCCceeEeeeecc
Q 007635 103 G-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN-----LQRVSGGFGPVIINNRKVIP----IPFDQPEGDIIFLIGDWY 172 (595)
Q Consensus 103 ~-tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~-----~q~~~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~ 172 (595)
. + .|+||++++|+|++ +++||||||||.. .|+.+||+|+|||+++...+ .++ .+|+|++|+++||+
T Consensus 103 ~~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 178 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHY 178 (333)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEEC
T ss_pred cee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeec
Confidence 4 5 49999999999999 5899999999986 69999999999999765321 122 45899999999999
Q ss_pred ccc--HHHH----------HHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceE
Q 007635 173 TRN--HTAL----------RTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSL 240 (595)
Q Consensus 173 ~~~--~~~~----------~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~ 240 (595)
+.. ...+ ...++.. ....++.++|||+.... ...+.++|++||+||||++|++....+
T Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~---------~~~~~l~v~~Ger~Rl~n~~~~~~~~~ 248 (333)
T 1mzy_A 179 IPKDEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGAL---------TGEGALKAKVGDNVLFVHSQPNRDSRP 248 (333)
T ss_dssp CCBCTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSCBCE
T ss_pred cCccccccccccccccccccchhHHh-hccCCcEEEECCccccc---------CCCcceEecCCCEEEEEECCCCCcccc
Confidence 831 1110 0001100 12467899999998521 013679999999988877776554333
Q ss_pred EEEEeCccceeeeccCccccc-e-eecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCC
Q 007635 241 NFRIQNHNLLLVETEGHYTSQ-Q-NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (595)
Q Consensus 241 ~~~i~gh~~~vi~~DG~~~~p-~-~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 318 (595)
. .+++|.|+|++ ||.++++ . .+|++.|.||||+||+|++++ +| +|+++++...... .....++++|.+..
T Consensus 249 h-~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG-~y~~~ch~~~h~~----~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 249 H-LIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PG-VYAYVNHNLIEAV----HKGATAHVLVEGEW 320 (333)
T ss_dssp E-EETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTCCEEEEEEESCC
T ss_pred E-EECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CE-EEEEecChhhhHh----hCCCEEEEEEcCCC
Confidence 3 38899999999 9999974 3 489999999999999999996 58 9999988653210 14567899998643
No 29
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=8.8e-45 Score=378.76 Aligned_cols=268 Identities=15% Similarity=0.176 Sum_probs=208.2
Q ss_pred cccCceEEEEEEEEEEEe--CCCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCC
Q 007635 25 FAEDDTIFYDFKVSYITA--SPLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ 102 (595)
Q Consensus 25 ~~~~~~~~~~~~v~~~~~--~~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 102 (595)
.+.+++++|+|++++..+ .+||.++.+|+|||++|||+|++++||+|+|+|+|++ +++||||+++.+.+++||.+
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~h~~~~h~~~~~~~~~ 103 (336)
T 1oe1_A 27 KSGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA---TNAMPHNVDFHGATGALGGA 103 (336)
T ss_dssp CCCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCC---CCCccccceECCCCCCCCCc
Confidence 345678999999999876 4679999999999999999999999999999999997 45788888887767777766
Q ss_pred C-CCCccCCCCeEEEEEEecCceeeeEEeccc----hhhhccCccccEEEccCCCCC----CCCCCCCCceeEeeeeccc
Q 007635 103 G-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSL----NLQRVSGGFGPVIINNRKVIP----IPFDQPEGDIIFLIGDWYT 173 (595)
Q Consensus 103 ~-tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~----~~q~~~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~~ 173 (595)
. ++ |+||++|+|+|++ +++||||||||. +.|+.+||+|+|||++++..+ .+. .+|+|++|+++|||+
T Consensus 104 ~~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~ 179 (336)
T 1oe1_A 104 KLTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYI 179 (336)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECC
T ss_pred ceEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeee
Confidence 5 54 9999999999999 589999999996 469999999999999865321 222 468999999999998
Q ss_pred ccH--HHH----------HHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEE
Q 007635 174 RNH--TAL----------RTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLN 241 (595)
Q Consensus 174 ~~~--~~~----------~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~ 241 (595)
..+ .++ ...++. .....++.++|||+..+.| ..+.++|++|++||| +|++..+.+.
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~---------~~~~l~v~~GervRl--in~~~~~~~~ 247 (336)
T 1oe1_A 180 PKGPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT---------GANALTAKVGETVLL--IHSQANRDTR 247 (336)
T ss_dssp CBCTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS---------GGGCEEEETTCEEEE--EEEESSSCBC
T ss_pred ccccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC---------CCcceEcCCCCEEEE--EecCCCCccc
Confidence 421 111 000100 0124678999999997442 137899999997765 5666655555
Q ss_pred EE-EeCccceeeeccCccccce--eecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCC
Q 007635 242 FR-IQNHNLLLVETEGHYTSQQ--NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (595)
Q Consensus 242 ~~-i~gh~~~vi~~DG~~~~p~--~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 318 (595)
|+ |++|.|+|++ ||.+++|. .++++.|+||||+||+|++++ +| +|+++++...... .....++++|.+..
T Consensus 248 ~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG-~y~~~~h~~~~~~----~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 248 PHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PG-VYAYLNHNLIEAF----ELGAAGHIKVEGKW 320 (336)
T ss_dssp EEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHH----TTSCEEEEEEESCC
T ss_pred eEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-Cc-eEEEEechhhccc----cCCCeEEEEECCCC
Confidence 44 6999999997 99999864 368999999999999999996 68 9999987642210 13467899998654
No 30
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=4.8e-44 Score=368.66 Aligned_cols=242 Identities=14% Similarity=0.182 Sum_probs=197.6
Q ss_pred cccccCceEEEEEEEEEEEeCCCCee-EEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCC
Q 007635 23 LCFAEDDTIFYDFKVSYITASPLGVP-QQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGV 101 (595)
Q Consensus 23 ~~~~~~~~~~~~~~v~~~~~~~dG~~-~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv 101 (595)
.+.+.+.+|++++.+. .-++|.. ..++..||++|||+||+++||+|+|+|+|+|++++||||||+++. +.+||+
T Consensus 6 ~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~ 80 (313)
T 3tas_A 6 TAPAGGEVKRIKLYAE---RLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGT 80 (313)
T ss_dssp BCCCCCCEEEEEEEEE---ECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCS
T ss_pred cCCCCceEEEEEEEEE---EcCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCC
Confidence 4555667899988874 3466644 456677999999999999999999999999999999999999875 579999
Q ss_pred CCCCCccCCCCeEEEEEEec------------CceeeeEEeccch------hhhccCccccEEEccCCCCCCCCCCCCCc
Q 007635 102 QGTNCPIPSQWNWTYQFQVK------------DQIGSFFYFPSLN------LQRVSGGFGPVIINNRKVIPIPFDQPEGD 163 (595)
Q Consensus 102 ~~tq~~I~PG~~~tY~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e 163 (595)
+.+||+|+||++|+|+|++. +++||||||||.. .|+.+||+|+|||+++... .+|+|
T Consensus 81 ~~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e 155 (313)
T 3tas_A 81 KQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRT 155 (313)
T ss_dssp TTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEE
T ss_pred ccccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccccc
Confidence 99999999999999999863 3679999999964 3578999999999997642 34899
Q ss_pred eeEeeeecccccHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEE
Q 007635 164 IIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFR 243 (595)
Q Consensus 164 ~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~ 243 (595)
++|+++||+ +||+... ..+.++++.|++|||||+|++.. .+.||
T Consensus 156 ~~l~~~d~t------------------------~Ng~~~~-----------~~~~l~v~~Ge~vr~~liN~g~~-~hpfH 199 (313)
T 3tas_A 156 HTIVFNDMT------------------------INNRPAH-----------TGPDFEATVGDRVEFVMITHGEY-YHTFH 199 (313)
T ss_dssp EEEEEETTE------------------------ETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEE
T ss_pred ceeeccchh------------------------cccCCcc-----------cccccccccCCEEEEEEeccccc-ceeee
Confidence 999999884 4555542 24779999999999999999965 79999
Q ss_pred EeCccceeeeccCcccc---ceeecEEEEcCCcEEEEEEEcCC--CCCcceEEEEeeecccccccccceeEEEEEecC
Q 007635 244 IQNHNLLLVETEGHYTS---QQNYTSFEIHVGQSYSFLVTMDQ--NASSDYYIVASARFVNESFWQRVTGVAILHYSN 316 (595)
Q Consensus 244 i~gh~~~vi~~DG~~~~---p~~~~~l~i~pG~R~dvlv~~~~--~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~ 316 (595)
++||.|++++.||.... +..+|++.|.||||++++|.+.+ .+| .|.++++...-.. ....+++..+.
T Consensus 200 lHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG-~w~~HCHi~~H~~-----~GM~~~f~V~~ 271 (313)
T 3tas_A 200 LHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKK 271 (313)
T ss_dssp ETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEEC
T ss_pred ecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCE-eEEEEeCChHHHH-----CCCeEEEEEEC
Confidence 99999999999987663 67899999999999999998764 467 8888887643221 23445666654
No 31
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=8.3e-44 Score=364.14 Aligned_cols=226 Identities=15% Similarity=0.205 Sum_probs=188.2
Q ss_pred ccccCceEEEEEEEEEEEeCCCC-eeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCC
Q 007635 24 CFAEDDTIFYDFKVSYITASPLG-VPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ 102 (595)
Q Consensus 24 ~~~~~~~~~~~~~v~~~~~~~dG-~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~ 102 (595)
.++.+.+|+|++.+++.. +| ....++..||++|||+|||++||+|+|+|+|+|++++||||||+++. +++||++
T Consensus 23 ~~~~~~~~~~~~~a~~~~---~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~ 97 (299)
T 3t9w_A 23 VRAQGTTRRITMYAEKIS---DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTL 97 (299)
T ss_dssp ----CCEEEEEEEEEEEE---TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT
T ss_pred cccCCCEEEEEEEEEecC---CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCc
Confidence 456778999999998754 33 23345566999999999999999999999999999999999999875 6799998
Q ss_pred CCCCccCCCCeEEEEEEec------------CceeeeEEeccch------hhhccCccccEEEccCCCCCCCCCCCCCce
Q 007635 103 GTNCPIPSQWNWTYQFQVK------------DQIGSFFYFPSLN------LQRVSGGFGPVIINNRKVIPIPFDQPEGDI 164 (595)
Q Consensus 103 ~tq~~I~PG~~~tY~f~~~------------~~~Gt~wYH~H~~------~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~ 164 (595)
.+||+|+||++|+|+|+++ +++||||||||.. .|+.+||+|+|||+++... .+|+|+
T Consensus 98 ~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~ 172 (299)
T 3t9w_A 98 MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQF 172 (299)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEE
T ss_pred cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccccc
Confidence 8999999999999999985 2589999999963 4788999999999987642 348999
Q ss_pred eEeeeecccccHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEE
Q 007635 165 IFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRI 244 (595)
Q Consensus 165 ~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i 244 (595)
++++++|+ +||+... +.+.++++.|++|||||+|++.. .+.|||
T Consensus 173 ~l~~~~~~------------------------~Ng~~~~-----------~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHl 216 (299)
T 3t9w_A 173 TVVFNDMM------------------------INNRAHH-----------DAPTFEANLGERVEWIAIGHGSN-FHTFHL 216 (299)
T ss_dssp EEEEETTE------------------------ETTCCTT-----------CCCEEEEETTCEEEEEEEEESSC-CCEEEE
T ss_pred eeeeeeee------------------------ecCcccc-----------ccccceecCCCEEEEEEEecccc-ceeeeE
Confidence 99987764 6777652 24889999999999999999976 689999
Q ss_pred eCccceeeeccCcccc---ceeecEEEEcCCcEEEEEEEcCC--CCCcceEEEEeee
Q 007635 245 QNHNLLLVETEGHYTS---QQNYTSFEIHVGQSYSFLVTMDQ--NASSDYYIVASAR 296 (595)
Q Consensus 245 ~gh~~~vi~~DG~~~~---p~~~~~l~i~pG~R~dvlv~~~~--~~g~~y~i~~~~~ 296 (595)
+||.|.++..|+.... +..+|++.|.||||++++|.+.+ .+| .|.++++..
T Consensus 217 HGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG-~w~~HCHi~ 272 (299)
T 3t9w_A 217 HGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPG-MWMYHCHVQ 272 (299)
T ss_dssp TTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSE-EEEEEECSH
T ss_pred ecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCe-eEEEEcCCH
Confidence 9999999999887664 34689999999999999997654 467 888888764
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=4.8e-44 Score=373.80 Aligned_cols=269 Identities=14% Similarity=0.165 Sum_probs=206.5
Q ss_pred ccccCceEEEEEEEEEEEeC--CCCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCC
Q 007635 24 CFAEDDTIFYDFKVSYITAS--PLGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGV 101 (595)
Q Consensus 24 ~~~~~~~~~~~~~v~~~~~~--~dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv 101 (595)
.++.+.+++|+|++++..++ +||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||.
T Consensus 32 ~~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~ 108 (340)
T 2bw4_A 32 AKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGG 108 (340)
T ss_dssp CSSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGG
T ss_pred ccCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCC
Confidence 45567789999999998876 569999999999999999999999999999999998 7899999998765444443
Q ss_pred CC-CCCccCCCCeEEEEEEecCceeeeEEeccch----hhhccCccccEEEccCCCCC----CCCCCCCCceeEeeeecc
Q 007635 102 QG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN----LQRVSGGFGPVIINNRKVIP----IPFDQPEGDIIFLIGDWY 172 (595)
Q Consensus 102 ~~-tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~----~q~~~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~ 172 (595)
.. + .|.||++++|+|+++ ++||||||||.. .|+.+||+|+|||++++..+ .+. .+|+|++|+++||+
T Consensus 109 ~~~~--~i~PG~~~~y~~~~~-~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~ 184 (340)
T 2bw4_A 109 GALT--QVNPGEETTLRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFY 184 (340)
T ss_dssp GGGC--CBCTTEEEEEEEECC-SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEEC
T ss_pred ccce--EeCCCCEEEEEEECC-CCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeee
Confidence 43 5 499999999999995 799999999965 69999999999999865311 122 45899999999999
Q ss_pred cc--cHHHH----------HHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceE
Q 007635 173 TR--NHTAL----------RTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSL 240 (595)
Q Consensus 173 ~~--~~~~~----------~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~ 240 (595)
+. ....+ ...++. .....++.++|||+.+.. ...+.+++++||+|||++.|++....
T Consensus 185 ~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~---------~~~~~l~v~~G~r~Rl~n~~~~~~~~- 253 (340)
T 2bw4_A 185 VPKDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL---------TGDHALTAAVGERVLVVHSQANRDTR- 253 (340)
T ss_dssp CCBCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT---------SGGGCEEEETTCEEEEEEEESSSCBC-
T ss_pred eccccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc---------cCCCceEcCCCCEEEEEECCCCCccc-
Confidence 83 11111 000110 002357899999998621 11378999999988777666544322
Q ss_pred EEEEeCccceeeeccCccccc-e-eecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeec-ccccccccceeEEEEEecCC
Q 007635 241 NFRIQNHNLLLVETEGHYTSQ-Q-NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF-VNESFWQRVTGVAILHYSNS 317 (595)
Q Consensus 241 ~~~i~gh~~~vi~~DG~~~~p-~-~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~-~~~~~~~~~~~~~il~y~~~ 317 (595)
..++++|.|+|++ ||.++.+ . .++++.|.||||+||+|++++ +| +|+++++... ... ....++++|.+.
T Consensus 254 ~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG-~y~~~~h~~~~h~~-----~Gm~~~~~V~~~ 325 (340)
T 2bw4_A 254 PHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PG-VYAYVNHNLIEAFE-----LGAAGHFKVTGE 325 (340)
T ss_dssp EEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CE-EEEEEESSHHHHHT-----TSCEEEEEEESC
T ss_pred eEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-Ce-eeEEEcCchHHHHh-----CCCEEEEEECCC
Confidence 2348899999997 9998864 3 589999999999999999996 68 9999987642 111 235688899764
Q ss_pred C
Q 007635 318 K 318 (595)
Q Consensus 318 ~ 318 (595)
.
T Consensus 326 ~ 326 (340)
T 2bw4_A 326 W 326 (340)
T ss_dssp C
T ss_pred C
Confidence 3
No 33
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=7.5e-41 Score=348.52 Aligned_cols=238 Identities=14% Similarity=0.220 Sum_probs=193.1
Q ss_pred cCceEEEEEEEEEEEeCCCCeeEE-EEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCC
Q 007635 27 EDDTIFYDFKVSYITASPLGVPQQ-VIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTN 105 (595)
Q Consensus 27 ~~~~~~~~~~v~~~~~~~dG~~~~-~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq 105 (595)
.+.+++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+++. .++||++.+|
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~~t~ 119 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTAMNK 119 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCccccc
Confidence 34679999999874 4554322 2234899999999999999999999999999999999999876 6899999889
Q ss_pred CccCCCCeEEEEEEecC------------ceeeeEEeccc------hhhhccCccccEEEccCCCCCCCCCCCCCceeEe
Q 007635 106 CPIPSQWNWTYQFQVKD------------QIGSFFYFPSL------NLQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFL 167 (595)
Q Consensus 106 ~~I~PG~~~tY~f~~~~------------~~Gt~wYH~H~------~~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~ 167 (595)
|+|+||++|+|+|++.+ ++||||||||. ..|+.+||+|+|||+++... .+|+|++++
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l~ 194 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 194 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEEE
Confidence 99999999999999842 35999999996 47899999999999987542 247899999
Q ss_pred eeecccccHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCc
Q 007635 168 IGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH 247 (595)
Q Consensus 168 l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 247 (595)
++|| +|||+..+ +.+.+++++||+|||||+|.+.. .+.||||||
T Consensus 195 ~~d~------------------------~iNG~~~~-----------~~~~l~v~~Ge~vri~l~N~g~~-~HpfHlHGh 238 (343)
T 3cg8_A 195 FNDM------------------------TINNRKPH-----------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 238 (343)
T ss_dssp EETT------------------------EETTCCTT-----------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred cccc------------------------eecccCCC-----------CCccEEeCCCCEEEEEEEcCCcc-ccccEecCc
Confidence 8765 78998752 24789999999999999999974 899999999
Q ss_pred cceeeeccCcccc----ceeecEEEEcCCcEEEEEEEcC--CCCCcceEEEEeeecccccccccceeEEEEEecCC
Q 007635 248 NLLLVETEGHYTS----QQNYTSFEIHVGQSYSFLVTMD--QNASSDYYIVASARFVNESFWQRVTGVAILHYSNS 317 (595)
Q Consensus 248 ~~~vi~~DG~~~~----p~~~~~l~i~pG~R~dvlv~~~--~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~ 317 (595)
.|+|++ ||.+.. +...|++.|.|||+++++++++ +.+| .|.++++...... ....+++.+...
T Consensus 239 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG-~w~~HCHi~~H~~-----~GM~g~~~V~~~ 307 (343)
T 3cg8_A 239 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAG-AWMYHCHVQSHSD-----MGMVGLFLVKKP 307 (343)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSE-EEEEEECSHHHHH-----TTCEEEEEEECT
T ss_pred EEEEec-cCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCe-eEEEeCCCHHHHh-----ccCcEEEEEecC
Confidence 999974 675543 3567999999999999999984 3578 8988887642211 234566777643
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=2.3e-40 Score=373.91 Aligned_cols=248 Identities=15% Similarity=0.214 Sum_probs=184.8
Q ss_pred cCceEEEEEEEEEEEe--CCCC------------eeEEE--EEE----------------CCCCCCceEEecCCCEEEEE
Q 007635 27 EDDTIFYDFKVSYITA--SPLG------------VPQQV--IAI----------------NGKFPGAVLNATTNNNIVIN 74 (595)
Q Consensus 27 ~~~~~~~~~~v~~~~~--~~dG------------~~~~~--~~~----------------Ng~~PGP~i~v~~Gd~v~v~ 74 (595)
...+|+|.+-+.+..+ +|.| +.+++ ..| |+++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4568999999988875 4322 22222 223 44799999999999999999
Q ss_pred EEeCCCCCceeecCCCccCCCCCCCCCCC-C--------CCccCCCCeEEEEEEecCc-----ee----eeEEeccc--h
Q 007635 75 VQNDLDESLLMTWPGIQMRRNSWQDGVQG-T--------NCPIPSQWNWTYQFQVKDQ-----IG----SFFYFPSL--N 134 (595)
Q Consensus 75 v~N~l~~~~siH~HG~~~~~~~~~DGv~~-t--------q~~I~PG~~~tY~f~~~~~-----~G----t~wYH~H~--~ 134 (595)
|+|+|+++++|||||+++. +++||+++ + ||+|+||++|+|+|+++++ +| |||||||. .
T Consensus 83 ~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 9999999999999999885 67999997 6 8999999999999999754 57 99999998 4
Q ss_pred hhhccCccccEEEccCCCCCC--CCCCCCCceeEeee------ecccccHHHHH-HHHhcCCCCCCCceEEEccCCCCCC
Q 007635 135 LQRVSGGFGPVIINNRKVIPI--PFDQPEGDIIFLIG------DWYTRNHTALR-TALDSGKDLDMPDGVLINGKGPYRY 205 (595)
Q Consensus 135 ~q~~~Gl~G~liV~~~~~~~~--~~~~~d~e~~l~l~------d~~~~~~~~~~-~~~~~~~~~~~~d~~liNG~~~~~~ 205 (595)
.|+.+||+|+|||+++..... ..+..++|++|+++ ||+++...... ..++ ......++.++|||+...
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~iNG~~~~-- 237 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRAS-SEVKNSHEFHAINGMIYN-- 237 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSSC--
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCC-cchhhcCceeccCCEecC--
Confidence 799999999999999764321 11233689999999 78876432210 0011 111234689999999851
Q ss_pred CCccCCCCCcceEEEecCCCEEEEEEEEcCCCc-eEEEEEeCccceeeeccCccccceeecEEEEcCCcEEEEEEEcCCC
Q 007635 206 NTTLVPDGIEYETINVDPGKTYRVRVHNVGTST-SLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQN 284 (595)
Q Consensus 206 ~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~~ 284 (595)
.+.+++++|++|||||+|++... .+.||+|||.|++|+.||. .+|++.|.||||+||+|++++
T Consensus 238 ----------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~v~~~~~~- 301 (647)
T 1sdd_B 238 ----------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKTLEMKASK- 301 (647)
T ss_dssp ----------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSCE-----EESSEEECTTEEEEEEEECCS-
T ss_pred ----------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCCc-----ccceEEECCCeEEEEEEEecc-
Confidence 37899999999999999999864 8999999999999999863 679999999999999999996
Q ss_pred CCcceEEEEeee
Q 007635 285 ASSDYYIVASAR 296 (595)
Q Consensus 285 ~g~~y~i~~~~~ 296 (595)
+| .|.++++..
T Consensus 302 pG-~w~~hch~~ 312 (647)
T 1sdd_B 302 PG-WWLLDTEVG 312 (647)
T ss_dssp SE-EEEEECCCH
T ss_pred ce-EeecccCcc
Confidence 57 888888764
No 35
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=8.1e-42 Score=351.09 Aligned_cols=214 Identities=14% Similarity=0.182 Sum_probs=160.9
Q ss_pred EEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCc----cCCCCCCCCCCC-C--CCccCCCCeEEEEEEecC
Q 007635 50 QVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQ----MRRNSWQDGVQG-T--NCPIPSQWNWTYQFQVKD 122 (595)
Q Consensus 50 ~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~----~~~~~~~DGv~~-t--q~~I~PG~~~tY~f~~~~ 122 (595)
+.+++| ++|||+|+|++||+|+|+|+|.++++++|||||++ +.+.+++||+++ + ||+|+||++|+|+|++++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~ 128 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISE 128 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCG
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCC
Confidence 445678 68999999999999999999999999999999998 445556666553 2 799999999999999964
Q ss_pred c---------eeeeEEeccchh--hhccCccccEEEccCCCC---CCCCCCCCCceeEeeeecccccHHHHHHHHhcCCC
Q 007635 123 Q---------IGSFFYFPSLNL--QRVSGGFGPVIINNRKVI---PIPFDQPEGDIIFLIGDWYTRNHTALRTALDSGKD 188 (595)
Q Consensus 123 ~---------~Gt~wYH~H~~~--q~~~Gl~G~liV~~~~~~---~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~ 188 (595)
+ +||||||||... |+.+||+|+|||+++... +.+. ..|+|++++++||..+.. . .
T Consensus 129 ~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~~~--------~--~ 197 (306)
T 1sdd_A 129 HSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDESKS--------W--N 197 (306)
T ss_dssp GGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETTSS--------S--S
T ss_pred ccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccccc--------c--c
Confidence 4 379999999765 889999999999987431 1222 458899999999853210 0 0
Q ss_pred CCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCC-ceEEEEEeCccceeeeccCccccceeecEE
Q 007635 189 LDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQQNYTSF 267 (595)
Q Consensus 189 ~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l 267 (595)
...++.++|||+... ..|.+++++|++|||||+|++.. ..+.||++||.|.+ ||. .+|++
T Consensus 198 ~~~~~~~~ING~~~~-----------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~~dtv 258 (306)
T 1sdd_A 198 QTSSLMYTVNGYVNG-----------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----KISAI 258 (306)
T ss_dssp CCCCEEECSSSCCSS-----------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----ECSCC
T ss_pred cCCCcceeeCCEecC-----------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----EcceE
Confidence 134678999999862 24789999999999999999987 56779999999875 773 47999
Q ss_pred EEcCCcEEEEEEEcCCCCCcceEEEEeee
Q 007635 268 EIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (595)
Q Consensus 268 ~i~pG~R~dvlv~~~~~~g~~y~i~~~~~ 296 (595)
.|.||||+||+|++++ +| .|+++++..
T Consensus 259 ~l~pger~~v~~~~~~-pG-~~~~hch~~ 285 (306)
T 1sdd_A 259 TLVSATSTTANMTVSP-EG-RWTIASLIP 285 (306)
T ss_dssp CEETTCCBC---------C-CCCCBCCST
T ss_pred EECCCcEEEEEEEcCC-Ce-EEEEEeCCh
Confidence 9999999999999984 67 898887753
No 36
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=8.7e-41 Score=379.80 Aligned_cols=249 Identities=12% Similarity=0.141 Sum_probs=196.6
Q ss_pred cCceEEEEEEEEEEEe--CCCCe---------------eEEE--EEE-CC---------------CCCCceEEecCCCEE
Q 007635 27 EDDTIFYDFKVSYITA--SPLGV---------------PQQV--IAI-NG---------------KFPGAVLNATTNNNI 71 (595)
Q Consensus 27 ~~~~~~~~~~v~~~~~--~~dG~---------------~~~~--~~~-Ng---------------~~PGP~i~v~~Gd~v 71 (595)
...+|+|.+.+++..+ +|+|. .+++ +.| |+ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 5678999999999874 67653 1222 222 33 689999999999999
Q ss_pred EEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecC---------ceeeeEEeccchh--hhccC
Q 007635 72 VINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKD---------QIGSFFYFPSLNL--QRVSG 140 (595)
Q Consensus 72 ~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~---------~~Gt~wYH~H~~~--q~~~G 140 (595)
+|+|+|+|+++++|||||+++..+.. ||++++||+|+||++|+|+|++++ ++||||||||... |+.+|
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~G 288 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSG 288 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTS
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCC
Confidence 99999999999999999999987754 799999999999999999999975 8999999999875 78999
Q ss_pred ccccEEEccCCCCCC--CCCCCCCceeEeeee------cccccHHHHHHHHhcCC--------CCCCCceEEEccCCCCC
Q 007635 141 GFGPVIINNRKVIPI--PFDQPEGDIIFLIGD------WYTRNHTALRTALDSGK--------DLDMPDGVLINGKGPYR 204 (595)
Q Consensus 141 l~G~liV~~~~~~~~--~~~~~d~e~~l~l~d------~~~~~~~~~~~~~~~~~--------~~~~~d~~liNG~~~~~ 204 (595)
|+|+|||+++..... .....++|++|++++ ||++.. +..++.... .....+.++|||+..
T Consensus 289 L~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~--~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~-- 364 (770)
T 2r7e_B 289 LIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTEN--MERNCRAPCNIQMEDPTFKENYRFHAINGYIM-- 364 (770)
T ss_dssp CCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGG--GSSCSCCSSCCCSSSSSSTTTSCEECTTSCTT--
T ss_pred ceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccc--hhhcccCccccccCCccccccCCccccCCccC--
Confidence 999999999764221 112457899888753 655422 111110000 001235689999985
Q ss_pred CCCccCCCCCcceEEEecCCCEEEEEEEEcCCC-ceEEEEEeCccceeeeccCccccceeecEEEEcCCcEEEEEEEcCC
Q 007635 205 YNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQ 283 (595)
Q Consensus 205 ~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~ 283 (595)
++.+.+++++|++|||||+|++.. ..|.||||||.|+|++.||. ..|++.|.||||++|+|++++
T Consensus 365 ---------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~ 430 (770)
T 2r7e_B 365 ---------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK 430 (770)
T ss_dssp ---------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS
T ss_pred ---------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC
Confidence 234779999999999999999975 47999999999999999974 689999999999999999985
Q ss_pred CCCcceEEEEeee
Q 007635 284 NASSDYYIVASAR 296 (595)
Q Consensus 284 ~~g~~y~i~~~~~ 296 (595)
+| .|.++++..
T Consensus 431 -pG-~w~~hcH~~ 441 (770)
T 2r7e_B 431 -AG-IWRVECLIG 441 (770)
T ss_dssp -CB-CCCBCCCSH
T ss_pred -CC-ceEEEeccc
Confidence 67 888887753
No 37
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.6e-38 Score=344.31 Aligned_cols=258 Identities=17% Similarity=0.220 Sum_probs=210.9
Q ss_pred CceEEEEEEEEEEEeCC-CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCC--CCceeecCCCccCCCCCCCCCCC-
Q 007635 28 DDTIFYDFKVSYITASP-LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD--ESLLMTWPGIQMRRNSWQDGVQG- 103 (595)
Q Consensus 28 ~~~~~~~~~v~~~~~~~-dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~--~~~siH~HG~~~~~~~~~DGv~~- 103 (595)
+.++.|+|++++..... +|....+|+|||++|||+|++++||+++|++.|.++ ..++|||||+. .+||++.
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc
Confidence 34678888887776665 688999999999999999999999999999999985 57999999985 3799886
Q ss_pred CCCccCCCCeEEEEEEecCceeeeEEeccch---hhhccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHH---
Q 007635 104 TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN---LQRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHT--- 177 (595)
Q Consensus 104 tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~---~q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~--- 177 (595)
+ .|.||++++|.|++ +++||||||||.. .|+.+||+|+|+|+++... | .+|+|++++++||++....
T Consensus 236 ~--~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~--P--~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 T--QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGL--P--QVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp C--CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCS--C--CCSEEEEEEEEEECBSSCTTCC
T ss_pred E--EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCC--C--CCCeeEEEEecccccCCccccc
Confidence 4 39999999999999 5799999999963 7889999999999986532 2 4588999999999975311
Q ss_pred -----HHHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceee
Q 007635 178 -----ALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLV 252 (595)
Q Consensus 178 -----~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi 252 (595)
.+.... ...++.++|||+.+.++ ..+.+++++|++|||||+|++....+.||++||.|+||
T Consensus 309 g~~~~~~~~~~-----~~~~~~~~iNG~~~~~~---------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv 374 (447)
T 2dv6_A 309 GEQEMDYEKLI-----NEKPEYFLFNGSVGSLT---------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHV 374 (447)
T ss_dssp EECCBBHHHHH-----TTCCSEEEETTSTTCCC---------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEE
T ss_pred ccccCChHHhh-----ccCCCEEEECCcccCCC---------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEE
Confidence 011111 12468899999997432 12579999999999999999988899999999999999
Q ss_pred eccCccccce--eecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCC
Q 007635 253 ETEGHYTSQQ--NYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSK 318 (595)
Q Consensus 253 ~~DG~~~~p~--~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 318 (595)
+.||.++++. ..|++.|.||||++|+|++++ +| .|+|+++...... ....++++|.+..
T Consensus 375 ~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~-pG-~~~~hch~~~h~~-----~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 375 YSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDR-AG-RYILVDHALSRLE-----HGLVGFLNVDGPK 435 (447)
T ss_dssp CGGGCSSSCCEEEESEEEECTTEEEEEEEECCS-CE-EEEEEESSGGGGG-----GTCCEEEEECSCS
T ss_pred EcCCcccCCCcccccEEEECCCcEEEEEEECCC-CE-EEEEEecCcCccc-----cCCEEEEEEeCCC
Confidence 9999998754 589999999999999999995 68 9999998754322 3347889997643
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.1e-36 Score=345.75 Aligned_cols=215 Identities=14% Similarity=0.187 Sum_probs=169.0
Q ss_pred CCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCC-----CCC-CCCccCCCCeEEEEEEecCcee----
Q 007635 56 GKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDG-----VQG-TNCPIPSQWNWTYQFQVKDQIG---- 125 (595)
Q Consensus 56 g~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DG-----v~~-tq~~I~PG~~~tY~f~~~~~~G---- 125 (595)
..+|||+||+++||+|+|+|+|++++++||||||+++. ++|+|| ++. +||+|+||++|+|+|++++++|
T Consensus 447 ~g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~ 525 (742)
T 2r7e_A 447 SGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKS 525 (742)
T ss_dssp SCSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSS
T ss_pred cCCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCccc
Confidence 36899999999999999999999999999999999984 677775 455 7999999999999999986554
Q ss_pred -----eeEEeccchh--hhccCccccEEEccCCCCC---CCCCCCCCceeEeeee------cccccHHHHHHHHhcCCCC
Q 007635 126 -----SFFYFPSLNL--QRVSGGFGPVIINNRKVIP---IPFDQPEGDIIFLIGD------WYTRNHTALRTALDSGKDL 189 (595)
Q Consensus 126 -----t~wYH~H~~~--q~~~Gl~G~liV~~~~~~~---~~~~~~d~e~~l~l~d------~~~~~~~~~~~~~~~~~~~ 189 (595)
|||||||... |+.+||+|+|||+++.... .+. ..|+|++|++++ ||++. .+..+.......
T Consensus 526 d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~-~~d~E~~l~~~~fde~~~wy~~~--~~~~~~~~p~~v 602 (742)
T 2r7e_A 526 DPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQI-MSDKRNVILFSVFDENRSWYLTE--NIQRFLPNPAGV 602 (742)
T ss_dssp SCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSS-CCSCCCEEEECBCCGGGSSCSHH--HHHHHSSSSSCS
T ss_pred CCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcC-CCCceEEEEeecccccccccccc--chhhcccCchhc
Confidence 9999999764 6899999999999875321 122 458999999964 55431 222221100000
Q ss_pred --C------CCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCC-ceEEEEEeCccceeeeccCcccc
Q 007635 190 --D------MPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTS 260 (595)
Q Consensus 190 --~------~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~vi~~DG~~~~ 260 (595)
. ....++|||+.+. +.+ +++++|++|||||+|+|.. ..+.|||+||.|+|+
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~~-----------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~-------- 662 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVFD-----------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK-------- 662 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCSS-----------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------
T ss_pred ccccccccccCceeeecCcCCC-----------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------
Confidence 0 0125789999861 123 8999999999999998874 468999999999987
Q ss_pred ceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeee
Q 007635 261 QQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (595)
Q Consensus 261 p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~ 296 (595)
+...|++.|.||||++|+|++++ +| .|.++++..
T Consensus 663 ~~~~Dtv~l~Pg~~~~v~~~ad~-pG-~w~~hcH~~ 696 (742)
T 2r7e_A 663 MVYEDTLTLFPFSGETVFMSMEN-PG-LWILGCHNS 696 (742)
T ss_dssp SSSBCSSCCCCCSSEECCEECCC-CC-CSCCEECCC
T ss_pred ccceeEEEECCCcEEEEEEEcCC-Ce-EEEEEeCCc
Confidence 46789999999999999999984 68 899998865
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.94 E-value=6.7e-27 Score=237.98 Aligned_cols=233 Identities=15% Similarity=0.123 Sum_probs=163.3
Q ss_pred CceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccceeecEEEEcC
Q 007635 192 PDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHV 271 (595)
Q Consensus 192 ~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~p 271 (595)
...+++||+.. .|.|++++|+++++|+.|.... .+.+|+||.. ..+.||.+- .+...|.|
T Consensus 54 ~~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~P 113 (288)
T 3gdc_A 54 FKGWSYNGRIP-------------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAP 113 (288)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCT
T ss_pred EEEEEECCccC-------------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECC
Confidence 35899999874 4899999999999999999876 6888999875 457899754 23457899
Q ss_pred CcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccCCC
Q 007635 272 GQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSA 351 (595)
Q Consensus 272 G~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~ 351 (595)
|++++..++++ .+| .||.+.+......-....+. +.|.+.... ..+. .+.++.+-. . +|...
T Consensus 114 G~~~~y~f~~~-~~G-t~~yH~H~~~~~~~~~~Gl~--G~liV~~~~-----~~~~-----~d~e~~l~~-~--d~~~~- 175 (288)
T 3gdc_A 114 GQSFTYEFDAT-PFG-THLYHCHQSPLAPHIAKGLY--GGFIVEPKE-----GRPP-----ADDEMVMVM-N--GYNTD- 175 (288)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCCSSHHHHHHTTCE--EEEEEECSS-----CCCC-----CSEEEEEEE-E--EECCS-
T ss_pred CCEEEEEEEcC-CCc-cEEEEecCcchHHHHhCcCe--EEEEEeCCc-----cCCC-----CcceEEEEE-e--eEecC-
Confidence 99999999996 578 99999876421000001122 333332211 0010 011110000 0 00000
Q ss_pred CCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCc
Q 007635 352 SGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTD 431 (595)
Q Consensus 352 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 431 (595)
.......|+|||+.|.. .
T Consensus 176 ------------------------------~g~~~~~~~iNG~~~~~-----~--------------------------- 193 (288)
T 3gdc_A 176 ------------------------------GGDDNEFYSVNGLPFHF-----M--------------------------- 193 (288)
T ss_dssp ------------------------------STTCCSEEEETTSTTHH-----H---------------------------
T ss_pred ------------------------------CCCCcceEEECcccccc-----c---------------------------
Confidence 00112358899987621 0
Q ss_pred eeeeeecCCcEEEEEEecCCCC--ceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCC
Q 007635 432 RSLINATYKGFIEIILQNNDTK--MQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDN 509 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vl~N~~~~--~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adN 509 (595)
...++++.|++|+|.|.|.+.. .||||||||.|+|++.+.. +..|.++||+.|+|++...|+|++++
T Consensus 194 ~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~ 262 (288)
T 3gdc_A 194 DFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPY 262 (288)
T ss_dssp HSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCS
T ss_pred CcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCC
Confidence 0125678999999999999753 5999999999999975421 22368999999999999999999999
Q ss_pred ceeeeeeeccccceeccceeEEEEeC
Q 007635 510 VGVWNLRVENLDRWYLGQETYMKIVN 535 (595)
Q Consensus 510 pG~W~~HCHil~h~~~Gm~~~~~V~~ 535 (595)
||.|+||||+++|++.||+..++|.+
T Consensus 263 pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 263 PGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp CEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred CEEEEEEecChHHHhcCCCEEEEEeC
Confidence 99999999999999999999999864
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.94 E-value=2.2e-26 Score=239.61 Aligned_cols=246 Identities=17% Similarity=0.139 Sum_probs=162.8
Q ss_pred CceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeec---cCccccceeecEEE
Q 007635 192 PDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVET---EGHYTSQQNYTSFE 268 (595)
Q Consensus 192 ~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~---DG~~~~p~~~~~l~ 268 (595)
...+++||+.. .|+|++++|+++|+||+|.... .+ +||.|.+.+.+. ||.+. ++...
T Consensus 23 ~~~~~~NG~~p-------------GP~I~v~~Gd~v~v~v~N~l~~-~~--siH~HG~~~~~~~~~DGvp~----vtq~~ 82 (339)
T 2zwn_A 23 YKVFGFNGQVP-------------GPLIHVQEGDDVIVNVTNNTSL-PH--TIHWHGVHQKGTWRSDGVPG----VTQQP 82 (339)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEEESSS-CB--CCEEETCCCTTCGGGSCCBT----TTBCC
T ss_pred EEEEEECCccC-------------CCeEEEECCCEEEEEEEECCCC-Cc--cEEeCCCCcCCCcccCCCCc----cccCc
Confidence 35799999863 3999999999999999999865 33 555566777764 99853 34467
Q ss_pred EcCCcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCcccccccc
Q 007635 269 IHVGQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQN 348 (595)
Q Consensus 269 i~pG~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~ 348 (595)
|.|||||++.++++ .+| +||.+++.....+.....+.+.-++ .... +..++. ... .+....+. +|.
T Consensus 83 I~PG~~~~y~f~~~-~~G-t~wyH~H~~~~~q~~~~Gl~G~liV--~p~~---~~~~~~-~~d-~e~~l~l~-----d~~ 148 (339)
T 2zwn_A 83 IEAGDSYTYKFKAD-RIG-TLWYHCHVNVNEHVGVRGMWGPLIV--DPKQ---PLPIEK-RVT-KDVIMMMS-----TWE 148 (339)
T ss_dssp BCTTCEEEEEEECC-SCE-EEEEECCSSHHHHTTTSCCEEEEEE--ECSS---CCTTGG-GCS-EEEEEEEE-----EEC
T ss_pred cCCCCeEEEEEECC-CCE-EEEEEecCCchhhhhcCCceEeEEe--cCCC---cccccc-cCC-ceEEEEee-----hee
Confidence 99999999999997 568 9999987643111100112222222 2211 011111 000 01000000 011
Q ss_pred CCCCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCC
Q 007635 349 TSASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPP 428 (595)
Q Consensus 349 l~~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~ 428 (595)
..... .+...+ . .......|.|||+.+..
T Consensus 149 ~~~~~-~~~~~g------~--------------~~~~~~~~~ING~~~~~------------------------------ 177 (339)
T 2zwn_A 149 SAVAD-KYGEGG------T--------------PMNVADYFSVNAKSFPL------------------------------ 177 (339)
T ss_dssp GGGTT-CTTCCC------S--------------TTSCCCEEEETTBCTTS------------------------------
T ss_pred ccccc-ccCCCC------C--------------CccccceEEEccccCCC------------------------------
Confidence 10000 000000 0 00112358889876420
Q ss_pred CCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeC
Q 007635 429 RTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLD 508 (595)
Q Consensus 429 ~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~ad 508 (595)
...+.++.|++++|+|.|.+...||||||||+|+|++.+++. +.+|.++||+.|+||+.+.|+|++|
T Consensus 178 ---~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~~----------~~~p~~~dtv~l~pg~r~~v~~~~~ 244 (339)
T 2zwn_A 178 ---TQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGLP----------LDSPYYADTVLVSPGERYDVIIEAD 244 (339)
T ss_dssp ---SCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECC
T ss_pred ---cccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCee----------cCCCcEEEEEEECCCCEEEEEEEeC
Confidence 123678899999999999988899999999999999996432 2237899999999999999999999
Q ss_pred Cceeeeeeeccccc------eeccceeEEEEeC
Q 007635 509 NVGVWNLRVENLDR------WYLGQETYMKIVN 535 (595)
Q Consensus 509 NpG~W~~HCHil~h------~~~Gm~~~~~V~~ 535 (595)
|||.|+||||++.| ...||+..+.+..
T Consensus 245 ~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g 277 (339)
T 2zwn_A 245 NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDG 277 (339)
T ss_dssp SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETT
T ss_pred CCeeEEEEEechhhcccccccCCCcEEEEEECC
Confidence 99999999999998 7789988888864
No 41
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.94 E-value=1.1e-26 Score=241.85 Aligned_cols=216 Identities=13% Similarity=0.128 Sum_probs=153.2
Q ss_pred ceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccceeecEEEEcCCcEEEEEEEcCCC-----------
Q 007635 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQN----------- 284 (595)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~~----------- 284 (595)
.|+|++++|+++|+||+|.... .+.+|.||..+. .+.||.++ +...|.|||+++..++++++
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 4899999999999999999976 456888888777 68999874 24468999999999998754
Q ss_pred -CCcceEEEEeeeccc---ccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccCCCCCCCCCCCC
Q 007635 285 -ASSDYYIVASARFVN---ESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQG 360 (595)
Q Consensus 285 -~g~~y~i~~~~~~~~---~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 360 (595)
.| .||.+.+..... ......+.+.-|++..+. +
T Consensus 149 ~~G-t~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~------------~------------------------------ 185 (343)
T 3cg8_A 149 SAG-YWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD------------V------------------------------ 185 (343)
T ss_dssp SCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC------------C------------------------------
T ss_pred Cce-EEEEecCccccccchhhhhcCCeEEEEEecCCC------------C------------------------------
Confidence 23 454544421100 000112233333332110 0
Q ss_pred CCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecCC
Q 007635 361 SFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYK 440 (595)
Q Consensus 361 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g 440 (595)
.+++++.+... .|+|||+.+. ....+.++.|
T Consensus 186 -------~pd~e~~l~~~---------d~~iNG~~~~---------------------------------~~~~l~v~~G 216 (343)
T 3cg8_A 186 -------LPDATHTIVFN---------DMTINNRKPH---------------------------------TGPDFEATVG 216 (343)
T ss_dssp -------CCSEEEEEEEE---------TTEETTCCTT---------------------------------CCCCEEEETT
T ss_pred -------CCCceEEEEcc---------cceecccCCC---------------------------------CCccEEeCCC
Confidence 01133333221 2789987641 0123678999
Q ss_pred cEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEe---CCceeeeeee
Q 007635 441 GFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSL---DNVGVWNLRV 517 (595)
Q Consensus 441 ~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~a---dNpG~W~~HC 517 (595)
++|+|+|.|.+...||||||||.|+|+.. |.++. ....+.++||+.|+|++++.|+|++ ||||.|+|||
T Consensus 217 e~vri~l~N~g~~~HpfHlHGh~f~v~~~--G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HC 288 (343)
T 3cg8_A 217 DRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHC 288 (343)
T ss_dssp CEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CEEEEEEEcCCccccccEecCcEEEEecc--CcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeC
Confidence 99999999999899999999999999743 33221 0113578999999999999999995 8999999999
Q ss_pred ccccceeccceeEEEEeCCCC
Q 007635 518 ENLDRWYLGQETYMKIVNPEE 538 (595)
Q Consensus 518 Hil~h~~~Gm~~~~~V~~~~~ 538 (595)
|+++|++.||+..+.|.+++.
T Consensus 289 Hi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 289 HVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp CSHHHHHTTCEEEEEEECTTS
T ss_pred CCHHHHhccCcEEEEEecCCC
Confidence 999999999999999987643
No 42
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.93 E-value=7.6e-26 Score=233.07 Aligned_cols=248 Identities=17% Similarity=0.134 Sum_probs=165.3
Q ss_pred ceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCcccee-eeccCccccceeecEEEEcC
Q 007635 193 DGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLL-VETEGHYTSQQNYTSFEIHV 271 (595)
Q Consensus 193 d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~i~p 271 (595)
..+++||+.. .|.|++++|+++++|+.|.... ...+|+||....- .+.||.+. +....|.|
T Consensus 23 ~~~~~ng~~p-------------GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~P 84 (318)
T 3g5w_A 23 HTFAFNGQVP-------------APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEP 84 (318)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccC-------------CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCC
Confidence 5799999874 4999999999999999998765 6788888876543 47899754 23457899
Q ss_pred CcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccCCC
Q 007635 272 GQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSA 351 (595)
Q Consensus 272 G~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~ 351 (595)
||+++..++++ .+| .||.+++.....+.....+. +.|...... +.+.+. . .+.+..+. .. +|....
T Consensus 85 G~~~~y~f~~~-~~G-t~wYH~H~~~~~~~~~~Gl~--G~lIV~~~~---~~~~~~---~-~d~e~~l~-l~--dw~~~~ 150 (318)
T 3g5w_A 85 GDTFTYKFKAE-PAG-TMWYHCHVNVNEHVTMRGMW--GPLIVEPKN---PLPIEK---T-VTKDYILM-LS--DWVSSW 150 (318)
T ss_dssp TCEEEEEEECC-SCE-EEEEECCSSHHHHHHHSCCE--EEEEEECSS---CCHHHH---T-CCEEEEEE-EE--EECGGG
T ss_pred CCEEEEEEEcC-CCE-EEEEEccCChhhhhccCCCE--EEEEEcCCC---cccccc---c-ccceeEEE-EE--eecccc
Confidence 99999999997 568 99998876421110001122 223332211 000000 0 01110000 00 111100
Q ss_pred CCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCc
Q 007635 352 SGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTD 431 (595)
Q Consensus 352 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 431 (595)
.. .....+ . ..+....|.|||+.|..
T Consensus 151 ~~-~~~~~~------~--------------~~~~~d~~~ING~~~~~--------------------------------- 176 (318)
T 3g5w_A 151 AN-KPGEGG------I--------------PGDVFDYYTINAKSFPE--------------------------------- 176 (318)
T ss_dssp TT-CTTCCC------C--------------TTCCCCEEEETTBCBTS---------------------------------
T ss_pred cc-ccccCC------C--------------CCCcCcEEEEcCcCCCC---------------------------------
Confidence 00 000000 0 00112358899987521
Q ss_pred eeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCce
Q 007635 432 RSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVG 511 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG 511 (595)
+..+.++.|++|+|+|.|.+...||||||||.|+|++++.+. +.+|.+|||+.|+||+.+.|+|++||||
T Consensus 177 ~~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG 246 (318)
T 3g5w_A 177 TQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPG 246 (318)
T ss_dssp SCCEEECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCS
T ss_pred CccEEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCe
Confidence 122678899999999999988899999999999999986432 1247899999999999999999999999
Q ss_pred eeeeeecccccee------ccceeEEEEeCC
Q 007635 512 VWNLRVENLDRWY------LGQETYMKIVNP 536 (595)
Q Consensus 512 ~W~~HCHil~h~~------~Gm~~~~~V~~~ 536 (595)
.|+||||+++|++ .||+..+.+...
T Consensus 247 ~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 247 LWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred eEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 9999999999998 477777877643
No 43
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.92 E-value=5.2e-25 Score=222.62 Aligned_cols=215 Identities=13% Similarity=0.130 Sum_probs=154.9
Q ss_pred ceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccceeecEEEEcCCcEEEEEEEcCCC-----------
Q 007635 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQN----------- 284 (595)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~~----------- 284 (595)
.|+|+++.|+++++++.|.... ...+|.+|..+.- +.||..+ ..-.|.||+++...++++++
T Consensus 35 GP~i~~~~Gd~v~v~~~N~~~~-~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~ 107 (276)
T 3kw8_A 35 GPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 107 (276)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCCC-CccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCccccccCccCCC
Confidence 5999999999999999999754 6788999887654 6899762 33468999999999999752
Q ss_pred -CCcceEEEEeeecc----cccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccCCCCCCCCCCC
Q 007635 285 -ASSDYYIVASARFV----NESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQ 359 (595)
Q Consensus 285 -~g~~y~i~~~~~~~----~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~ 359 (595)
+| .||.+.+.... .+. ...+.+.-|+. ... .+
T Consensus 108 ~~g-t~~YH~h~~~~~~~~~~~-~~Gl~G~liV~--~~~----------~~----------------------------- 144 (276)
T 3kw8_A 108 SAG-YWHYHDHVVGTEHGTGGI-RNGLYGPVIVR--RKG----------DV----------------------------- 144 (276)
T ss_dssp SCE-EEEEECSSSSSTTCHHHH-HHTCEEEEEEE--CTT----------CC-----------------------------
T ss_pred CCE-EEEEecCccccccchhhh-hCccEEEEEEe--cCC----------Cc-----------------------------
Confidence 34 67777654321 010 01122222222 100 00
Q ss_pred CCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecC
Q 007635 360 GSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATY 439 (595)
Q Consensus 360 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~ 439 (595)
..++++.+.. ..|+|||+.|.. ...+.++.
T Consensus 145 --------~~drE~~l~l---------~~~~iNG~~~~~---------------------------------~p~i~v~~ 174 (276)
T 3kw8_A 145 --------LPDATHTIVF---------NDMTINNRKPHT---------------------------------GPDFEATV 174 (276)
T ss_dssp --------CCSEEEEEEE---------ETTEETTCCTTC---------------------------------CCCEEEET
T ss_pred --------ccccceEEEe---------cccccceecccC---------------------------------CCCEEEec
Confidence 0123343332 137899987531 12367899
Q ss_pred CcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeC---Cceeeeee
Q 007635 440 KGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLD---NVGVWNLR 516 (595)
Q Consensus 440 g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~ad---NpG~W~~H 516 (595)
|++|+|+|.|.+...||||||||.|++++. |.++.. ...+.+|||+.|+|++...++|+++ |||.|+||
T Consensus 175 G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~--G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~H 246 (276)
T 3kw8_A 175 GDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYH 246 (276)
T ss_dssp TCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEE
T ss_pred CCEEEEEEecCCCcceeEEEccceeEEecc--CccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeEEEE
Confidence 999999999998889999999999999764 333211 1125799999999999999999997 89999999
Q ss_pred eccccceeccceeEEEEeCCCC
Q 007635 517 VENLDRWYLGQETYMKIVNPEE 538 (595)
Q Consensus 517 CHil~h~~~Gm~~~~~V~~~~~ 538 (595)
||+++|++.||+..|.|.+++.
T Consensus 247 CH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 247 CHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp ECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCchHhhCCCeEEEEEeCCCC
Confidence 9999999999999999998765
No 44
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.92 E-value=6.5e-25 Score=224.18 Aligned_cols=216 Identities=12% Similarity=0.130 Sum_probs=148.8
Q ss_pred ceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccceeecEEEEcCCcEEEEEEEcCC------------
Q 007635 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQ------------ 283 (595)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~------------ 283 (595)
.|+|++++|++++++|.|.... ..++|.+|..+. -+.||.++.. -.|.|||++...+++++
T Consensus 57 GP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~~-----~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMNG-----SAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTTT-----CCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCcccc-----CccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 5999999999999999998765 577888887655 3679975421 24789999988888763
Q ss_pred CCCcceEEEEeeeccccc---ccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccCCCCCCCCCCCC
Q 007635 284 NASSDYYIVASARFVNES---FWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQG 360 (595)
Q Consensus 284 ~~g~~y~i~~~~~~~~~~---~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 360 (595)
.+| .||.+.+....... ....+.+.-|+. ...
T Consensus 130 ~~g-t~~YH~H~~~~~~~~~~~~~GL~G~liV~--~~~------------------------------------------ 164 (299)
T 3t9w_A 130 TAG-YWHYHDHAMGTEHGTEGVLKGLYGALVVR--RQG------------------------------------------ 164 (299)
T ss_dssp CCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEE--CTT------------------------------------------
T ss_pred Cce-eEEEecCCcccccchhhhcccccceEEEe--ccc------------------------------------------
Confidence 234 66665543211000 000111111111 000
Q ss_pred CCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecCC
Q 007635 361 SFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYK 440 (595)
Q Consensus 361 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g 440 (595)
...+++++.+.+ ..|.+|+..+. +...+.++.|
T Consensus 165 -----~~~~d~e~~l~~---------~~~~~Ng~~~~---------------------------------~~p~l~v~~G 197 (299)
T 3t9w_A 165 -----DLLPKRQFTVVF---------NDMMINNRAHH---------------------------------DAPTFEANLG 197 (299)
T ss_dssp -----CCCCSEEEEEEE---------ETTEETTCCTT---------------------------------CCCEEEEETT
T ss_pred -----ccCccccceeee---------eeeeecCcccc---------------------------------ccccceecCC
Confidence 001234444443 13678876542 1233678899
Q ss_pred cEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEE---EEEEEeCCceeeeeee
Q 007635 441 GFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWT---AILVSLDNVGVWNLRV 517 (595)
Q Consensus 441 ~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~---~Irf~adNpG~W~~HC 517 (595)
++|+|+|.|.+...||||||||.|+|+..+.... ....+.++||+.|.|+... +++|++||||.|+|||
T Consensus 198 e~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~~--------~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HC 269 (299)
T 3t9w_A 198 ERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTS--------EYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHC 269 (299)
T ss_dssp CEEEEEEEEESSCCCEEEETTCCEESSSSSSCCS--------TTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CEEEEEEEeccccceeeeEecceEEEEecccccC--------CcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEc
Confidence 9999999999989999999999999988764321 2233578999999998654 5556678999999999
Q ss_pred ccccceeccceeEEEEeCCCC
Q 007635 518 ENLDRWYLGQETYMKIVNPEE 538 (595)
Q Consensus 518 Hil~h~~~Gm~~~~~V~~~~~ 538 (595)
|+++|++.||+..|+|.+.+.
T Consensus 270 Hi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 270 HVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp CSHHHHHTTCEEEEEEECTTS
T ss_pred CCHHHHhcCCeEEEEEECCCC
Confidence 999999999999999997654
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.92 E-value=4.6e-24 Score=219.49 Aligned_cols=232 Identities=12% Similarity=0.079 Sum_probs=155.6
Q ss_pred ceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccceeecEEEEcCCcEEEEEEEcCCC-----------
Q 007635 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQN----------- 284 (595)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~~----------- 284 (595)
.|+|+++.|++++++|.|.... ..++|.||..+.- +.||.... .-.|.||+++...+++..+
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~-~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYEI-SSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCCC-CccEeecCCcCCc-cCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 5899999999999999998765 5778888876543 57997542 2247899999888877532
Q ss_pred -CCcceEEEEeeeccccc---ccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccCCCCCCCCCCCC
Q 007635 285 -ASSDYYIVASARFVNES---FWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQG 360 (595)
Q Consensus 285 -~g~~y~i~~~~~~~~~~---~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~ 360 (595)
.| .||.+.+.....+. ....+.+.-|++ ...
T Consensus 114 ~~g-t~~YH~h~~~~~~~~~~~~~Gl~G~liV~--~~~------------------------------------------ 148 (313)
T 3tas_A 114 SAG-YWHYHDHVVGTEHGTGGIRNGLYGPVIVR--RKG------------------------------------------ 148 (313)
T ss_dssp SCE-EEEEECSSSSSTTCHHHHHHTCEEEEEEE--CTT------------------------------------------
T ss_pred Cce-EEEEeecCcccccchhhhhccccCceEee--ccc------------------------------------------
Confidence 23 56665543211000 001111211111 000
Q ss_pred CCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecCC
Q 007635 361 SFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYK 440 (595)
Q Consensus 361 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g 440 (595)
...+++++.+.+. .|++|+..+.. ...+.++.|
T Consensus 149 -----~~~~d~e~~l~~~---------d~t~Ng~~~~~---------------------------------~~~l~v~~G 181 (313)
T 3tas_A 149 -----DVLPDRTHTIVFN---------DMTINNRPAHT---------------------------------GPDFEATVG 181 (313)
T ss_dssp -----CBCCSEEEEEEEE---------TTEETTCCTTC---------------------------------CCCEEEETT
T ss_pred -----cccccccceeecc---------chhcccCCccc---------------------------------ccccccccC
Confidence 0012344444331 27788765421 123667899
Q ss_pred cEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEE---eCCceeeeeee
Q 007635 441 GFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVS---LDNVGVWNLRV 517 (595)
Q Consensus 441 ~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~---adNpG~W~~HC 517 (595)
++|+|+|.|.+...||||||||.|+|+..+.... ....+.++||+.|.|++...+++. ++|||.|+|||
T Consensus 182 e~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HC 253 (313)
T 3tas_A 182 DRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHC 253 (313)
T ss_dssp CEEEEEEEEESSCCEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CEEEEEEecccccceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEe
Confidence 9999999999989999999999999998753211 123478999999999988877775 46999999999
Q ss_pred ccccceeccceeEEEEeCCCCCCCCCCCCCCCccccccc
Q 007635 518 ENLDRWYLGQETYMKIVNPEENGDTEMGPPDNVLYCGAL 556 (595)
Q Consensus 518 Hil~h~~~Gm~~~~~V~~~~~~~~~~~~~P~~~~~cg~~ 556 (595)
|+++|++.||+..|.|..++... ....|......|..
T Consensus 254 Hi~~H~~~GM~~~f~V~~~d~~~--p~~~p~~~~~~~~~ 290 (313)
T 3tas_A 254 HVQSHSDMGMVGLFLVKKPDGTI--PGYDPHRHHHGAAS 290 (313)
T ss_dssp CSHHHHHTTCEEEEEEECTTCCC--TTCCTTCCBTTBCC
T ss_pred CChHHHHCCCeEEEEEECCCCCC--CCCCcccccccccc
Confidence 99999999999999999887642 12345554433333
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.86 E-value=9.3e-23 Score=209.19 Aligned_cols=228 Identities=14% Similarity=0.135 Sum_probs=132.2
Q ss_pred eEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCcccc----ceeecEEEEcCCcEEEEEEEcCCCCC------
Q 007635 217 ETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTS----QQNYTSFEIHVGQSYSFLVTMDQNAS------ 286 (595)
Q Consensus 217 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~----p~~~~~l~i~pG~R~dvlv~~~~~~g------ 286 (595)
|+|++++|+++++||.|... ..+.+|.||..+. .+.||.+.. +...+...|.||||++..+++++.+|
T Consensus 60 P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~ 137 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDP 137 (306)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSC
T ss_pred CEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCC
Confidence 89999999999999999775 4677788877643 268997653 12233567999999999999976532
Q ss_pred --cceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccCCCCCCCCCCCCCCCc
Q 007635 287 --SDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSASGARPNPQGSFHY 364 (595)
Q Consensus 287 --~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~p~~~~~~ 364 (595)
.+||.+.+.....+. ...+.+ ++|.+..... ...+.+. . .+.+ +...+..
T Consensus 138 ~~GT~wYHsH~~~~~q~-~~GL~G-~liV~~~~~~-~~~~~~~---~-~d~e--------~~l~~~d------------- 189 (306)
T 1sdd_A 138 PCLTHIYYSYVNLVEDF-NSGLIG-PLLICKKGTL-TEDGTQK---M-FEKQ--------HVLMFAV------------- 189 (306)
T ss_dssp SEEEEEEECCSSSHHHH-HTTCCE-EEEEECTTCB-CTTSSBS---S-SCCC--------CCCBCCE-------------
T ss_pred CceEEEEeccCCchhhh-ccCceE-EEEEccCCCC-CccCCcC---c-ccce--------EEEEEEe-------------
Confidence 399999875321111 112333 3444432110 0000000 0 0000 0000000
Q ss_pred CccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecCCcEEE
Q 007635 365 GSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKGFIE 444 (595)
Q Consensus 365 ~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~~ve 444 (595)
+ +............|.|||+.+.. ...+.++.|++|+
T Consensus 190 --------~--d~~~~~~~~~~~~~~ING~~~~~---------------------------------~p~l~v~~G~~vr 226 (306)
T 1sdd_A 190 --------F--DESKSWNQTSSLMYTVNGYVNGT---------------------------------MPDITVCAHDHIS 226 (306)
T ss_dssp --------E--ETTSSSSCCCCEEECSSSCCSSC---------------------------------CCCCCCCCC----
T ss_pred --------c--ccccccccCCCcceeeCCEecCC---------------------------------CcceEEcCCCEEE
Confidence 0 00000000112357788876521 0124567899999
Q ss_pred EEEecCCC--CceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceeeeeeeccccc
Q 007635 445 IILQNNDT--KMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNLRVENLDR 522 (595)
Q Consensus 445 ~vl~N~~~--~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W~~HCHil~h 522 (595)
|.|.|.+. ..|+||+|||.|++ . ..++||+.|.||+.+.|+|++++||.|+||||+++|
T Consensus 227 lrliN~g~~~~~h~~hlhG~~~~~----d---------------G~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H 287 (306)
T 1sdd_A 227 WHLIGMSSGPELFSIHFNGQVLEQ----N---------------HHKISAITLVSATSTTANMTVSPEGRWTIASLIPRH 287 (306)
T ss_dssp --BBCCCSSSCEECCBCSSTTCEE----T---------------TEECSCCCEETTCCBC--------CCCCCBCCSTTT
T ss_pred EEEEeCCCCCccEEEEECCcEeee----C---------------CEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHH
Confidence 99999976 47999999999986 1 246899999999999999999999999999999999
Q ss_pred eeccceeEEEEeCC
Q 007635 523 WYLGQETYMKIVNP 536 (595)
Q Consensus 523 ~~~Gm~~~~~V~~~ 536 (595)
.+.||+..+.|.+.
T Consensus 288 ~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 288 FQAGMQAYIDIKNC 301 (306)
T ss_dssp GGGTCBCCC-----
T ss_pred HhcCCeEEEEEecC
Confidence 99999999998743
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.85 E-value=1.3e-20 Score=212.73 Aligned_cols=264 Identities=12% Similarity=0.137 Sum_probs=154.3
Q ss_pred ceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccc----eeecEEEEcCCcEEEEEEEcCCCCC----c
Q 007635 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQ----QNYTSFEIHVGQSYSFLVTMDQNAS----S 287 (595)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p----~~~~~l~i~pG~R~dvlv~~~~~~g----~ 287 (595)
.|+|++++|+++++||.|.... ...+|.||.... .+.||.+... ..+....|.|||+++..+++++..| +
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 4999999999999999999875 567777776654 5789976421 1223567999999999999987532 4
Q ss_pred ----ceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccc--cCcc-ccccccCCCCCCCCCCCC
Q 007635 288 ----DYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAA--MTQP-RSIRQNTSASGARPNPQG 360 (595)
Q Consensus 288 ----~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~--~~~~-~~~~~~l~~~~~~p~p~~ 360 (595)
.||.+.+.....+. ...+.+.-|+.-.+... .....|. ++.+.. +... ....|.+.. +..
T Consensus 146 ~~c~T~wYHsH~~~~~q~-~~GL~G~lIV~~~~~~~-~~~~~~~-----~~~e~~l~l~~~d~~~~w~~~~-----~~~- 212 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEKDI-HSGLIGPLLICRKGTLD-KETNMPV-----DMREFVLLFMVFDEKKSWYYDK-----KPT- 212 (647)
T ss_dssp CSEEEEEEECCSSHHHHH-TTTCEEEEEEECTTSSC-TTSCCCS-----SCCEEEEEEEEEEGGGSSCCC----------
T ss_pred CCceEEEEccCCCCcccc-cccCccCEEEeeCCCcc-cccCCCC-----cceeEEEEEEeecCcccccccc-----Ccc-
Confidence 79999877421111 11233333333222110 0000111 111111 1000 000111110 000
Q ss_pred CCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecCC
Q 007635 361 SFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYK 440 (595)
Q Consensus 361 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g 440 (595)
..+.... .. .......+.|||+.+. . ..+.++.|
T Consensus 213 ----------~~~~~~~-~~-~~~~~~~~~iNG~~~~---~-------------------------------p~l~v~~G 246 (647)
T 1sdd_B 213 ----------RSWRRAS-SE-VKNSHEFHAINGMIYN---L-------------------------------PGLRMYEQ 246 (647)
T ss_dssp -----------------------CCCEEEEETTBSSC---C-------------------------------CCCEEETT
T ss_pred ----------cccccCC-cc-hhhcCceeccCCEecC---C-------------------------------CCeEEcCC
Confidence 0000000 00 0111245778887651 0 12567889
Q ss_pred cEEEEEEecCCC--CceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceeeeeeec
Q 007635 441 GFIEIILQNNDT--KMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNLRVE 518 (595)
Q Consensus 441 ~~ve~vl~N~~~--~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W~~HCH 518 (595)
++|+|+|.|.+. ..||||+|||.|+|++.+ +.++||+.|.||+.+.|+|++++||.|+||||
T Consensus 247 ~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch 310 (647)
T 1sdd_B 247 EWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTE 310 (647)
T ss_dssp CEEEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECC
T ss_pred CEEEEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccC
Confidence 999999999975 479999999999998653 56899999999999999999999999999999
Q ss_pred cccceeccceeEEEEeCCCC--CC-CCCCCCCCCccccccc
Q 007635 519 NLDRWYLGQETYMKIVNPEE--NG-DTEMGPPDNVLYCGAL 556 (595)
Q Consensus 519 il~h~~~Gm~~~~~V~~~~~--~~-~~~~~~P~~~~~cg~~ 556 (595)
+++|.+.||+..|.|.+++- +. .....+|+....+...
T Consensus 311 ~~~h~~~Gm~~~~~V~~~~c~~Plg~~~g~I~~~~i~asS~ 351 (647)
T 1sdd_B 311 VGEIQRAGMQTPFLIVDRECKMPMGLSTGLIADSQIQASEF 351 (647)
T ss_dssp CHHHHTTTCEEEEEEECTTCCEECSTTTSCSCGGGEEESCC
T ss_pred cccccccccccceeeecccccccccccCCcccccccccccc
Confidence 99999999999999974321 00 0113466665544433
No 48
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.82 E-value=1.3e-19 Score=187.39 Aligned_cols=248 Identities=19% Similarity=0.120 Sum_probs=160.5
Q ss_pred ceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCC-ceEEEEEeCccceeeeccCccccceeecEEEEcC
Q 007635 193 DGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHV 271 (595)
Q Consensus 193 d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~p 271 (595)
..+++||+.. .|+|++++|+++++|++|.... ..+.+|+||.. +.||... ...|.|
T Consensus 59 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~P 115 (327)
T 1kbv_A 59 RYWTFDGDVP-------------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAP 115 (327)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCT
T ss_pred EEEEECCccC-------------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecC
Confidence 5799999864 4899999999999999999753 46778888753 5788642 124899
Q ss_pred CcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccCCC
Q 007635 272 GQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTSA 351 (595)
Q Consensus 272 G~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~~ 351 (595)
||++++.+++++ +| .||.+++......-......+ +++.+. .. ++|. .+.+..+-. -+|....
T Consensus 116 G~~~~y~f~~~~-~G-t~wyH~h~~~~~~~~~~Gl~G-~~iV~~-~~-----~~p~-----~d~e~~l~~---~d~~~~~ 178 (327)
T 1kbv_A 116 GRTSTFSFKALQ-PG-LYIYHCAVAPVGMHIANGMYG-LILVEP-KE-----GLPK-----VDKEFYIVQ---GDFYTKG 178 (327)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCSSHHHHHHTTCEE-EEEEEC-TT-----CCCC-----CSEEEEEEE---EEECBSS
T ss_pred CCEEEEEEECCC-Ce-EEEEEeCCCChhhhhhcceEE-EEEEec-CC-----CCCC-----CceEEEEEe---eeeeccC
Confidence 999999999986 68 999998653211000011222 333332 11 1221 011111100 0111110
Q ss_pred CCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCc
Q 007635 352 SGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTD 431 (595)
Q Consensus 352 ~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~ 431 (595)
.. .. . +....+ +.... ... ...+.|||+.+... .
T Consensus 179 ~~--~~-~-----g~~~~~----~~~~~--~~~-~~~~~iNG~~~~~~-------------------------------~ 212 (327)
T 1kbv_A 179 KK--GA-Q-----GLQPFD----MDKAV--AEQ-PEYVVFNGHVGALT-------------------------------G 212 (327)
T ss_dssp CT--TC-C-----EEECBC----HHHHH--HTC-CSEEEETTSTTTTS-------------------------------G
T ss_pred cc--cc-c-----cccccC----hhHhc--cCC-CceEEEcCcccCCC-------------------------------C
Confidence 00 00 0 000000 00000 011 13577888764210 0
Q ss_pred eeeeeecCCcEEEEEEecCCC-CceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCc
Q 007635 432 RSLINATYKGFIEIILQNNDT-KMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNV 510 (595)
Q Consensus 432 ~~v~~~~~g~~ve~vl~N~~~-~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNp 510 (595)
...++++.|++++|.|.|.+. ..|+||+|||.|+||+.+++. .+|.++|++.|.||+.+.|.|++++|
T Consensus 213 ~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~-----------~~p~~~d~l~l~pGer~dv~v~~~~p 281 (327)
T 1kbv_A 213 DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGK-----------LINENVQSTIVPAGGSAIVEFKVDIP 281 (327)
T ss_dssp GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEEECSC
T ss_pred ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCc-----------CCCCceeEEEECCCCEEEEEEEeCCC
Confidence 134678899999999999874 679999999999999997542 12688999999999999999999999
Q ss_pred eeeeeeeccccce-eccceeEEEEeCCC
Q 007635 511 GVWNLRVENLDRW-YLGQETYMKIVNPE 537 (595)
Q Consensus 511 G~W~~HCHil~h~-~~Gm~~~~~V~~~~ 537 (595)
|.|++|||+.+|. ..||...++|....
T Consensus 282 G~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 282 GNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred eEEEEEeccccccccCCcEEEEEECCCC
Confidence 9999999999885 78898889887543
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.81 E-value=5.1e-19 Score=184.30 Aligned_cols=260 Identities=13% Similarity=0.152 Sum_probs=155.3
Q ss_pred CceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCC-CceEEEEEeCccceeeeccCccccceeecEEEEc
Q 007635 192 PDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGT-STSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIH 270 (595)
Q Consensus 192 ~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~ 270 (595)
...+++||+.. .|+|++++|+++|+|+.|... ...|.++++++.. +.||..+ . .|.
T Consensus 59 ~~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~ 115 (340)
T 2bw4_A 59 IHAMTFNGSVP-------------GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVN 115 (340)
T ss_dssp EEEEEETTBSS-------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBC
T ss_pred EEEEEECCCCC-------------CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeC
Confidence 35799999853 389999999999999999873 2345666766542 2344322 1 399
Q ss_pred CCcEEEEEEEcCCCCCcceEEEEeeecc--cccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCcccccccc
Q 007635 271 VGQSYSFLVTMDQNASSDYYIVASARFV--NESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQN 348 (595)
Q Consensus 271 pG~R~dvlv~~~~~~g~~y~i~~~~~~~--~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~ 348 (595)
|||++++.+++++ +| .||.+++.... .+. .....+. ++.+.....+...+.|. . .+.+..+. ..+|.
T Consensus 116 PG~~~~y~~~~~~-~G-t~wyH~h~~~~~~~~~-~~Gl~G~-~iV~~~~~~~~~~~~p~---~-~d~e~~l~---l~D~~ 184 (340)
T 2bw4_A 116 PGEETTLRFKATK-PG-VFVYHCAPEGMVPWHV-TSGMNGA-IMVLPRDGLKDEKGQPL---T-YDKIYYVG---EQDFY 184 (340)
T ss_dssp TTEEEEEEEECCS-CE-EEEEECCCTTCHHHHH-HTTCEEE-EEEECTBCEECTTSCEE---C-CSEEEEEE---EEEEC
T ss_pred CCCEEEEEEECCC-Ce-EEEEEcCCCCchhhHH-hCcCEEE-EEEccCcCcccccCCCc---C-cceeEEEe---eeeee
Confidence 9999999999985 78 99999886421 110 0123332 33332111000000010 0 01111000 00111
Q ss_pred CCCCCCCCCCCCCCC-cCcc--ceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCC
Q 007635 349 TSASGARPNPQGSFH-YGSI--NITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLT 425 (595)
Q Consensus 349 l~~~~~~p~p~~~~~-~~~~--~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~ 425 (595)
+.. .+.+.+. +... ..... .... .......|.|||+.|...
T Consensus 185 ~~~-----~~~g~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~iNG~~~~~~-------------------------- 228 (340)
T 2bw4_A 185 VPK-----DEAGNYKKYETPGEAYEDA--VKAM---RTLTPTHIVFNGAVGALT-------------------------- 228 (340)
T ss_dssp CCB-----CTTSCBCCCCSHHHHHHHH--HHHH---HTTCCSEEEETTSTTTTS--------------------------
T ss_pred ecc-----ccCCcccccccccccccch--hhHh---hcCCCCEEEECCccCCcc--------------------------
Confidence 100 0000000 0000 00000 0000 000113578888765210
Q ss_pred CCCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCC--cccEEEECCCcEEEE
Q 007635 426 RPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAI--SKCTTEVYPGAWTAI 503 (595)
Q Consensus 426 ~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~--~RDTv~v~p~g~~~I 503 (595)
....+.++.|++++|++.|.+...|++|+|||.|+|+.. |.+. +++ ++||+.+.||+.+.|
T Consensus 229 -----~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~d--G~~~----------~~p~~~~dtv~l~pGer~~v 291 (340)
T 2bw4_A 229 -----GDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWAT--GKFR----------NPPDLDQETWLIPGGTAGAA 291 (340)
T ss_dssp -----GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEETT--CCTT----------SCCEEEESCCCBCTTEEEEE
T ss_pred -----CCCceEcCCCCEEEEEECCCCCccceEEecCcceEEeCC--Cccc----------CCccccceEEEeCCCceEEE
Confidence 013467888999999888887788999999999999962 3221 133 469999999999999
Q ss_pred EEEeCCceeeeeeeccc-cceeccceeEEEEeCCCC
Q 007635 504 LVSLDNVGVWNLRVENL-DRWYLGQETYMKIVNPEE 538 (595)
Q Consensus 504 rf~adNpG~W~~HCHil-~h~~~Gm~~~~~V~~~~~ 538 (595)
.|.+++||.|+||||++ +|.+.||+..++|..+..
T Consensus 292 ~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 292 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 99999999999999999 699999999999986543
No 50
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.81 E-value=8.2e-21 Score=215.93 Aligned_cols=242 Identities=11% Similarity=0.092 Sum_probs=149.6
Q ss_pred ceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccceeecEEEEcCCcEEEEEEEcCC---------CCC
Q 007635 216 YETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQ---------NAS 286 (595)
Q Consensus 216 ~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~---------~~g 286 (595)
.|.|+++.|++++++|.|.... ...+|.||..+..-.-||..- ....|.||+++...+++++ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQASR-PYSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSSS-CCCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCCC-CcceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 4899999999999999999764 677888887665544458642 1246899999999999875 456
Q ss_pred cceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCc--cc-cccccCCCCC--CCCCCCCC
Q 007635 287 SDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQ--PR-SIRQNTSASG--ARPNPQGS 361 (595)
Q Consensus 287 ~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~--~~-~~~~~l~~~~--~~p~p~~~ 361 (595)
.||.+.+.....+. ...+.+. +|.. ........ .. .+. .+.++.+-. .. ...|.+.... ....|...
T Consensus 272 -t~wYHsh~~~~~q~-~~GL~G~-liV~-~~~~~~~~-~~--~~~-~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~ 343 (770)
T 2r7e_B 272 -AWAYSSDVDLEKDV-HSGLIGP-LLVC-HTNTLNPA-HG--RQV-TVQEFALFFTIFDETKSWYFTENMERNCRAPCNI 343 (770)
T ss_dssp -EEEECCCSSSSHHH-HTSCCEE-EEEE-CSTTSCSS-SC--CCC-SSEEEECCCCEECCSSSSCTTGGGSSCSCCSSCC
T ss_pred -eEEeeccCCcHHHH-hCCceee-EEEC-CCcccccc-cC--CCc-cceEEEEEEeecCccccchhccchhhcccCcccc
Confidence 89998776432111 1122222 3322 21110000 00 000 111111000 00 0001010000 00001000
Q ss_pred CCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCCceeeeeecCCc
Q 007635 362 FHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRTDRSLINATYKG 441 (595)
Q Consensus 362 ~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~~~~v~~~~~g~ 441 (595)
...+ . . .......|.|||..|. ....+.++.|+
T Consensus 344 ---~~~d--~--------~-~~~~~~~~~ING~~~~---------------------------------~~~~l~v~~Ge 376 (770)
T 2r7e_B 344 ---QMED--P--------T-FKENYRFHAINGYIMD---------------------------------TLPGLVMAQDQ 376 (770)
T ss_dssp ---CSSS--S--------S-STTTSCEECTTSCTTT---------------------------------TCCCCCCCSSS
T ss_pred ---ccCC--c--------c-ccccCCccccCCccCC---------------------------------CCCCeEEeCCC
Confidence 0000 0 0 0111224667776541 11235678899
Q ss_pred EEEEEEecCCCC--ceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceeeeeeecc
Q 007635 442 FIEIILQNNDTK--MQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWNLRVEN 519 (595)
Q Consensus 442 ~ve~vl~N~~~~--~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W~~HCHi 519 (595)
+|+|+|.|.+.. .||||||||.|+|++.+ +.++||+.|+|++++.|+|++||||.|+||||+
T Consensus 377 ~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~ 440 (770)
T 2r7e_B 377 RIRWYLLSMGSNENIHSIHFSGHVFTVRKKE----------------EYKMALYNLYPGVFETVEMLPSKAGIWRVECLI 440 (770)
T ss_dssp CEEEECCCCCSSSCCCEEEBSSCCEECCSSS----------------CCEESEEECCTTCCCEEEECCSSCBCCCBCCCS
T ss_pred EEEEEEEeCCCCcceEEEEEcCCEEEEEecC----------------CceeeEEEECCCeEEEEEEEeCCCCceEEEecc
Confidence 999999998743 79999999999999874 248999999999999999999999999999999
Q ss_pred ccceeccceeEEEEe
Q 007635 520 LDRWYLGQETYMKIV 534 (595)
Q Consensus 520 l~h~~~Gm~~~~~V~ 534 (595)
++|.+.||+..|.|.
T Consensus 441 ~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 441 GEHLHAGMSTLFLVY 455 (770)
T ss_dssp HHHHTTBCCCCCCBC
T ss_pred ccccccccccccccc
Confidence 999999999999884
No 51
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.75 E-value=3.1e-17 Score=170.23 Aligned_cols=260 Identities=12% Similarity=0.087 Sum_probs=148.6
Q ss_pred ceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCC-ceEEEEEeCccceeeeccCccccceeecEEEEcC
Q 007635 193 DGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHV 271 (595)
Q Consensus 193 d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~p 271 (595)
..+++||+.. .|.|++++|+++++|+.|.+.. ..+.++++++. ..||.. +. . .|.|
T Consensus 53 ~~~~~ng~~p-------------gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~--~--~i~P 109 (333)
T 1mzy_A 53 QAMTFDGSIP-------------GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GL--T--LINP 109 (333)
T ss_dssp EEEEETTBSS-------------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GG--C--CBCT
T ss_pred EEEEECCccC-------------CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--ce--e--EeCC
Confidence 5789999864 4899999999999999999642 22334444321 123221 11 1 3899
Q ss_pred CcEEEEEEEcCCCCCcceEEEEeeec--c-cccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCcccccccc
Q 007635 272 GQSYSFLVTMDQNASSDYYIVASARF--V-NESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQN 348 (595)
Q Consensus 272 G~R~dvlv~~~~~~g~~y~i~~~~~~--~-~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~ 348 (595)
|+++++.+++++ +| .||.+++... . .+. .....+.-|++ ..... ..+.+ .|...+.+..+. .. +|.
T Consensus 110 G~~~~y~f~~~~-~G-t~~yH~h~~~~~~~~~~-~~Gl~G~~iV~--~~~~~-~~~~~--~p~~~d~e~~l~-l~--D~~ 178 (333)
T 1mzy_A 110 GEKVVLRFKATR-AG-AFVYHCAPGGPMIPWHV-VSGMAGCIMVL--PRDGL-KDHEG--KPVRYDTVYYIG-ES--DHY 178 (333)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCSTTHHHHHH-HTTCEEEEEEE--CTTCC-BCTTS--CBCCCSEEEEEE-EE--EEC
T ss_pred CCEEEEEEECCC-CE-EEEEeecCCcccchhhh-hCCCEEEEEEc--cCcCc-ccccc--CCCccchheeee-ee--eec
Confidence 999999999974 78 9999987642 0 110 01133333343 21100 00000 110011111000 00 111
Q ss_pred CCCCCCCCCCCCCCC-cCcc--ceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCC
Q 007635 349 TSASGARPNPQGSFH-YGSI--NITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLT 425 (595)
Q Consensus 349 l~~~~~~p~p~~~~~-~~~~--~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~ 425 (595)
+.. ...+.+. +... ..... +... .......|.|||+.+..+
T Consensus 179 ~~~-----~~~g~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~ING~~~~~~-------------------------- 222 (333)
T 1mzy_A 179 IPK-----DEDGTYMRFSDPSEGYEDM--VAVM---DTLIPSHIVFNGAVGALT-------------------------- 222 (333)
T ss_dssp CCB-----CTTSCBCCCSSHHHHHHHH--HHHH---TTTCCSEEEETTSTTTTS--------------------------
T ss_pred cCc-----cccccccccccccccccch--hHHh---hccCCcEEEECCcccccC--------------------------
Confidence 100 0000000 0000 00000 0000 000113578888754210
Q ss_pred CCCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCC-cccEEEECCCcEEEEE
Q 007635 426 RPPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAI-SKCTTEVYPGAWTAIL 504 (595)
Q Consensus 426 ~~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~-~RDTv~v~p~g~~~Ir 504 (595)
+...+.++.|++++|++.|.....|+.++|||.|.|++ + |.+.+ .|. ++||+.|.||+.+.|.
T Consensus 223 -----~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~-d-G~~~~---------~p~~~~dtv~l~pGer~~v~ 286 (333)
T 1mzy_A 223 -----GEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE-T-GKFHN---------APERDLETWFIRGGTAGAAL 286 (333)
T ss_dssp -----GGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET-T-CCTTS---------CCEEEESBCCBCTTEEEEEE
T ss_pred -----CCcceEecCCCEEEEEECCCCCccccEEECCCCeEEEe-C-CcccC---------CCccCcceEEECCCceEEEE
Confidence 11236788899999888776555556667889899987 3 43211 122 5899999999999999
Q ss_pred EEeCCceeeeeeeccccce-eccceeEEEEeCCCC
Q 007635 505 VSLDNVGVWNLRVENLDRW-YLGQETYMKIVNPEE 538 (595)
Q Consensus 505 f~adNpG~W~~HCHil~h~-~~Gm~~~~~V~~~~~ 538 (595)
|.+++||.|+||||+++|. +.||+..|+|.....
T Consensus 287 v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 287 YKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp EECCSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EEcCCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 9999999999999999997 999999999986543
No 52
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.70 E-value=1.6e-16 Score=171.32 Aligned_cols=248 Identities=15% Similarity=0.105 Sum_probs=160.5
Q ss_pred ceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCC-ceEEEEEeCccceeeeccCccccceeecEEEEcC
Q 007635 193 DGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHV 271 (595)
Q Consensus 193 d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~p 271 (595)
..+++||+.. .|.|+++.|+++++|+.|.... ..+.+|+||+. ..||... ...|.|
T Consensus 49 ~~~~~ng~~p-------------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~p 105 (442)
T 2zoo_A 49 VFWSFGETVP-------------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAP 105 (442)
T ss_dssp EEEEETTBSS-------------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCT
T ss_pred EEEEECCcCC-------------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECC
Confidence 5799999873 4899999999999999998642 47889999865 3687532 235899
Q ss_pred CcEEEEEEEcCCCCCcceEEEEeeecc-cccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccCC
Q 007635 272 GQSYSFLVTMDQNASSDYYIVASARFV-NESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNTS 350 (595)
Q Consensus 272 G~R~dvlv~~~~~~g~~y~i~~~~~~~-~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l~ 350 (595)
|+++++.+++++ +| .||.+.+.... .+. .....+.|.+.... ++|. .+.++.+- .. +|...
T Consensus 106 g~~~~y~f~~~~-~G-t~~yH~H~~~~~~~~---~~Gl~G~~iv~~~~-----~~~~-----~d~e~~l~-l~--d~~~~ 167 (442)
T 2zoo_A 106 GHTSTFNFKALN-PG-LYIYHCATAPVGMHI---ANGMYGLILVEPKE-----GLAP-----VDREYYLV-QG--DFYTK 167 (442)
T ss_dssp TCEEEEEEECCS-CE-EEEEECCCSSHHHHH---HTTCEEEEEEECTT-----CCCC-----CSEEEEEE-EE--EECBS
T ss_pred CCEEEEEEEcCC-Ce-EEEEecCCCChHHHH---hCccEEEEEEeCCC-----CCCC-----CCceEEEE-ee--eeecc
Confidence 999999999974 78 99999854211 110 01123333333221 1121 01111110 00 11111
Q ss_pred CCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCC
Q 007635 351 ASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRT 430 (595)
Q Consensus 351 ~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~ 430 (595)
... ..+ +. ..+.+... .......+.|||+.+...
T Consensus 168 ~~~--~~~------~~----~~~~~~~~---~~~~~~~~liNG~~~~~~------------------------------- 201 (442)
T 2zoo_A 168 GEF--GEA------GL----QPFDMAKA---IDEDADYVVFNGSVGSTT------------------------------- 201 (442)
T ss_dssp SCT--TCC------EE----ECBCHHHH---HTTCCSEEEETTSTTTTS-------------------------------
T ss_pred Ccc--ccc------cc----ccCChhHh---ccCCCCEEEECCCcCCCC-------------------------------
Confidence 000 000 00 00000000 001113467888754210
Q ss_pred ceeeeeecCCcEEEEEEecCC-CCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCC
Q 007635 431 DRSLINATYKGFIEIILQNND-TKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDN 509 (595)
Q Consensus 431 ~~~v~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adN 509 (595)
....+.++.|+++.|.|.|.+ ...|+||+|||.|.|++.+++. ..|.+.|++.+.||+...|.|++++
T Consensus 202 ~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~-----------~~p~~~~~~~l~pg~r~~v~v~~~~ 270 (442)
T 2zoo_A 202 DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGS-----------LKNHNVQTTLIPAGGAAIVEFKVEV 270 (442)
T ss_dssp GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSS-----------CEECSBSEEEECTTEEEEEEEECCS
T ss_pred CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCcc-----------CCCccceEEEECCCeeEEEEEEcCC
Confidence 012367788999999999976 3679999999999999997432 1267899999999999999999999
Q ss_pred ceeeeeeeccccc-eeccceeEEEEeCCCC
Q 007635 510 VGVWNLRVENLDR-WYLGQETYMKIVNPEE 538 (595)
Q Consensus 510 pG~W~~HCHil~h-~~~Gm~~~~~V~~~~~ 538 (595)
||.|.+|||...| .+.||+..++|...+.
T Consensus 271 ~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 271 PGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp CEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred CCeEEEEecccccccccCceEEEEecCCCC
Confidence 9999999999999 5899999999875543
No 53
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.69 E-value=7.6e-16 Score=160.01 Aligned_cols=259 Identities=15% Similarity=0.175 Sum_probs=152.6
Q ss_pred ceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCC-ceEEEEEeCccceeeeccCccccceeecEEEEcC
Q 007635 193 DGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS-TSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHV 271 (595)
Q Consensus 193 d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~p 271 (595)
..+++||+.. .|+|++++|+++++|+.|.... ..+.++++++.. +.||..+ . .|.|
T Consensus 54 ~~~~~ng~~p-------------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~-----~--~i~p 110 (336)
T 1oe1_A 54 QAMTFNGSMP-------------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKL-----T--NVNP 110 (336)
T ss_dssp EEEEETTBSS-------------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCT
T ss_pred EEEEECCccC-------------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcce-----E--EeCC
Confidence 5789999853 4899999999999999998752 467788888752 2233322 1 3899
Q ss_pred CcEEEEEEEcCCCCCcceEEEEeeecc--cccccccceeEEEEEecCCCCCCCCCCCCCCCCCCccccccCccccccccC
Q 007635 272 GQSYSFLVTMDQNASSDYYIVASARFV--NESFWQRVTGVAILHYSNSKGAASGPLPEAPSDIYNQWAAMTQPRSIRQNT 349 (595)
Q Consensus 272 G~R~dvlv~~~~~~g~~y~i~~~~~~~--~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~l 349 (595)
|++++..+++++ +| .||.+++.... .+. .....+.-|++-.... ..+.+. |...+.+..+. . .+|.+
T Consensus 111 G~~~~y~f~~~~-~G-t~~yH~h~~~~~~~~~-~~Gl~G~liV~~~~~~---~~~~~~--~~~~D~e~~l~-~--~D~~~ 179 (336)
T 1oe1_A 111 GEQATLRFKADR-SG-TFVYHCAPEGMVPWHV-VSGMSGTLMVLPRDGL---KDPQGK--PLHYDRAYTIG-E--FDLYI 179 (336)
T ss_dssp TEEEEEEEECCS-CE-EEEEECCCTTCHHHHH-HTTCEEEEEEECTTCC---BCTTSC--BCCCSEEEEEE-E--EEECC
T ss_pred CCEEEEEEECCC-Ce-EEEEecCCCCchhHHH-hCCCeEEEEEecCcCC---cccccC--cccCCceeEee-e--eeeee
Confidence 999999999985 78 99999886321 010 0123333344322110 001111 10001111000 0 01111
Q ss_pred CCCCCCCCCCCCCC-cCcc-ce-eeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCC
Q 007635 350 SASGARPNPQGSFH-YGSI-NI-TDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTR 426 (595)
Q Consensus 350 ~~~~~~p~p~~~~~-~~~~-~~-~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~ 426 (595)
.. .+.+.+. +... .. ... +... .......+.|||+.+...
T Consensus 180 ~~-----~~~g~~~~~~~~~~~~~~~--~~~~---~~~~~~~~liNG~~~~~~--------------------------- 222 (336)
T 1oe1_A 180 PK-----GPDGKYKDYATLAESYGDT--VQVM---RTLTPSHIVFNGKVGALT--------------------------- 222 (336)
T ss_dssp CB-----CTTSSBCCCSSTGGGHHHH--HHHH---HTTCCSEEEETTSTTTTS---------------------------
T ss_pred cc-----ccCCceeecccccccccch--hhHh---hcCCCCEEEECCeeccCC---------------------------
Confidence 00 0000000 0000 00 000 0000 000112466777653210
Q ss_pred CCCCceeeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCC--cccEEEECCCcEEEEE
Q 007635 427 PPRTDRSLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAI--SKCTTEVYPGAWTAIL 504 (595)
Q Consensus 427 ~~~~~~~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~--~RDTv~v~p~g~~~Ir 504 (595)
+...+.++.|+++.|+..+.....+++++|||.|.|+. .|.+. +|+ +.||+.+++|+.+.+.
T Consensus 223 ----~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~~----------~p~~~~~dtv~i~pGer~dvl 286 (336)
T 1oe1_A 223 ----GANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKFA----------NPPQRDLETWFIRGGSAGAAL 286 (336)
T ss_dssp ----GGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEE
T ss_pred ----CCcceEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcCc----------CCccccceEEEECCCCcEEEE
Confidence 12346788999999877666556677777999999996 34321 233 4699999999999999
Q ss_pred EEeCCceeeeeeeccccce-eccceeEEEEeCCCC
Q 007635 505 VSLDNVGVWNLRVENLDRW-YLGQETYMKIVNPEE 538 (595)
Q Consensus 505 f~adNpG~W~~HCHil~h~-~~Gm~~~~~V~~~~~ 538 (595)
|.+++||.|+||||.+.|. +.||+..++|.....
T Consensus 287 v~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 287 YTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEcCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 9999999999999999875 899999999985443
No 54
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.65 E-value=3.2e-17 Score=140.61 Aligned_cols=90 Identities=12% Similarity=0.173 Sum_probs=73.0
Q ss_pred CCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCC--CCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccc
Q 007635 56 GKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRN--SWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL 133 (595)
Q Consensus 56 g~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~--~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~ 133 (595)
-+|++|+|++++||+|+ ++|..+.++++||||..+... ..+||.+.+++.|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 47889999999999975 679988999999999865421 1123332345789999999999998668999999999
Q ss_pred hhhhccCccccEEEcc
Q 007635 134 NLQRVSGGFGPVIINN 149 (595)
Q Consensus 134 ~~q~~~Gl~G~liV~~ 149 (595)
.|..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 677889999999974
No 55
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.55 E-value=1.5e-13 Score=148.14 Aligned_cols=237 Identities=11% Similarity=0.051 Sum_probs=151.0
Q ss_pred eEEEEEEEEEEEeCCCC-----------eeEEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeec-CCCccCCCC
Q 007635 30 TIFYDFKVSYITASPLG-----------VPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTW-PGIQMRRNS 96 (595)
Q Consensus 30 ~~~~~~~v~~~~~~~dG-----------~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~~~ 96 (595)
.+++.+.+++-....+| .....++|||+. .|+|+|++| ++++++.|... ....+|+ ||..... -
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i 228 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-I 228 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-E
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-E
Confidence 45777887765554443 234679999985 699999999 99999999975 5678999 8865432 3
Q ss_pred CCCCCC----C--CCCccCCCCeEEEEEEecCceeeeEEeccchhhhccCccc-----------cEE-EccCCCCCCCCC
Q 007635 97 WQDGVQ----G--TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFG-----------PVI-INNRKVIPIPFD 158 (595)
Q Consensus 97 ~~DGv~----~--tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G-----------~li-V~~~~~~~~~~~ 158 (595)
..||.+ . .+..|.|||+++..++++ +.|+||++++........+.| +++ ........ +.
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~-~~- 305 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLP-LV- 305 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCc-Cc-
Confidence 579963 2 567799999999999995 689999999864432211111 111 11110000 00
Q ss_pred CCCCceeEeeeecccccHH-HHHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCC
Q 007635 159 QPEGDIIFLIGDWYTRNHT-ALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTS 237 (595)
Q Consensus 159 ~~d~e~~l~l~d~~~~~~~-~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~ 237 (595)
..+.+..|..+..-... .....+.-. ..++|||+.+.. ..+.++++.|++++|+|+|.
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~------~~~~iNg~~f~~----------~~~~~~~~~G~~~~~~l~N~--- 364 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG------DDPGINGQLWDV----------NRIDVTAQQGTWERWTVRAD--- 364 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC------SSSSBTTBCCCT----------TCCCEEEETTCEEEEEEEEE---
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe------eEEEECCEeCCC----------CCCcEEcCCCCEEEEEEECC---
Confidence 00001001100000000 000000000 046799998631 13568999999999999997
Q ss_pred ceEEEEEeCccceeeeccCccc---cceeecEEEEcCCcEEEEEEEcCCCCC---cceEEEEeee
Q 007635 238 TSLNFRIQNHNLLLVETEGHYT---SQQNYTSFEIHVGQSYSFLVTMDQNAS---SDYYIVASAR 296 (595)
Q Consensus 238 ~~~~~~i~gh~~~vi~~DG~~~---~p~~~~~l~i~pG~R~dvlv~~~~~~g---~~y~i~~~~~ 296 (595)
..|.||||||.|+|++.||... +|...|++.+ |+++.|.++++++ | ..|-++++..
T Consensus 365 ~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~dnp-g~~~g~w~~HCHil 426 (451)
T 2uxt_A 365 EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFGQP-SWAHFPFYFNSQTL 426 (451)
T ss_dssp EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECCSC-CBTTBCEEEEESSH
T ss_pred CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeCCC-CCCCCceEEeCCch
Confidence 4799999999999999999865 3678999999 9999999999853 4 1388888764
No 56
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.50 E-value=5.9e-13 Score=143.08 Aligned_cols=232 Identities=12% Similarity=0.087 Sum_probs=158.5
Q ss_pred eEEEEEEEEEEEeCC------------CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCC
Q 007635 30 TIFYDFKVSYITASP------------LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNS 96 (595)
Q Consensus 30 ~~~~~~~v~~~~~~~------------dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~ 96 (595)
.+++.+.+++-.... .|.....++|||+. .|.|+|++| ++++++.|... ....+|++|..... -
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i 222 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-I 222 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-E
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-E
Confidence 467777776543221 13344678999996 699999999 99999999975 46789999976542 3
Q ss_pred CCCCCCC------CCCccCCCCeEEEEEEecCceeeeEEeccchhh--hc-cCc--------------ccc--EEEccCC
Q 007635 97 WQDGVQG------TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQ--RV-SGG--------------FGP--VIINNRK 151 (595)
Q Consensus 97 ~~DGv~~------tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q--~~-~Gl--------------~G~--liV~~~~ 151 (595)
..||.+. ....|.||++++..++++ ++|.||++|+.... .. .|| ... |.+....
T Consensus 223 ~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~-~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 223 AADGGFLEEPLEVSELLLAPGERAEVLVRLR-KEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEEEECC-SSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred ecCCCCCCCceEeceEEECCceeEEEEEEcC-CCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 5788652 345699999999999995 69999999974211 10 122 111 2222211
Q ss_pred C-CCCC-----CCCCC---CceeEeeeecccccHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEec
Q 007635 152 V-IPIP-----FDQPE---GDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVD 222 (595)
Q Consensus 152 ~-~~~~-----~~~~d---~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~ 222 (595)
. .+.| +.... .+..+.+.- +. ....+.|||+.+.. ..+.+.++
T Consensus 302 ~~~~~p~~l~~~~~l~~~~~~r~~~l~~---------------~~---~g~~~~iNg~~~~~----------~~~~~~~~ 353 (439)
T 2xu9_A 302 KPLPLPKALSPFPTLPAPVVTRRLVLTE---------------DM---MAARFFINGQVFDH----------RRVDLKGQ 353 (439)
T ss_dssp CCCCCCSCCCCCCCCCCCSEEEEEEEEE---------------EG---GGTEEEETTBCCCT----------TCCCEEEC
T ss_pred ccccCcccCCCcccCCCCCcceEEEEEe---------------ec---cCceEeECCEECCC----------CCCceecC
Confidence 1 0111 10000 000111100 00 01368999998721 12458999
Q ss_pred CCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccc-cceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeee
Q 007635 223 PGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT-SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (595)
Q Consensus 223 ~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~-~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~ 296 (595)
.|++++|+|.|.+.. .|.||+|||.|+|++.+|... .|...|++.+.||+++.+.++++ .+| .|-++++..
T Consensus 354 ~g~~~~~~~~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG-~w~~HCHil 425 (439)
T 2xu9_A 354 AQTVEVWEVENQGDM-DHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKG-RTVFHCHIV 425 (439)
T ss_dssp TTCEEEEEEEECSSS-CEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCE-EEEEEESSH
T ss_pred CCCEEEEEEEcCCCC-CCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCC-CEEEECCcc
Confidence 999999999998765 799999999999999999765 48889999999999999999977 568 788888764
No 57
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.48 E-value=6.6e-14 Score=128.11 Aligned_cols=99 Identities=13% Similarity=0.200 Sum_probs=76.7
Q ss_pred CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCC------CCC--CCccCCCC--eE
Q 007635 45 LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGV------QGT--NCPIPSQW--NW 114 (595)
Q Consensus 45 dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv------~~t--q~~I~PG~--~~ 114 (595)
.|+..+.+.++|. |+|+|+|++||+|+++++|..+ ...|.+.+.+.++++.+.. +++ ..+|.||+ ++
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3455555667776 6899999999999999999733 4578887776655554311 110 12789999 99
Q ss_pred EEEEEecCceeeeEEeccchhhhccCccccEEEc
Q 007635 115 TYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIIN 148 (595)
Q Consensus 115 tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 148 (595)
+|.|++ ++|+||||||...|+.+||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999997 79999999999999999999999985
No 58
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.42 E-value=1e-11 Score=135.62 Aligned_cols=261 Identities=11% Similarity=0.065 Sum_probs=160.7
Q ss_pred EEEEEEEEEEeCCCCe-----eEEEEEECCCCC--------CceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCCC
Q 007635 32 FYDFKVSYITASPLGV-----PQQVIAINGKFP--------GAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSW 97 (595)
Q Consensus 32 ~~~~~v~~~~~~~dG~-----~~~~~~~Ng~~P--------GP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~ 97 (595)
++.|.+++-....++. .-..++|||+.. .|+|+|++|+++++|+.|... ....+|++|....- -.
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~ 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IE 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EE
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-Ee
Confidence 5566665443333332 235689999753 389999999999999999975 46788888876542 35
Q ss_pred CCCCCC-----CCCccCCCCeEEEEEEecCceeeeEEeccchh--h-----hccCccccEEEccCCCCCCCCCCCCCcee
Q 007635 98 QDGVQG-----TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNL--Q-----RVSGGFGPVIINNRKVIPIPFDQPEGDII 165 (595)
Q Consensus 98 ~DGv~~-----tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~--q-----~~~Gl~G~liV~~~~~~~~~~~~~d~e~~ 165 (595)
.||.+. ....|.|||+++..+++++.+|+||.+++... + ...|+..+++.........|......+ .
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~-~ 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPN-P 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSS-C
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCc-c
Confidence 788752 34568999999999999655799999998531 1 223443344433211111111000000 0
Q ss_pred EeeeecccccHH--HH---------HHHHhcCCCCCCCceEEEccCCCCCCCC-c----cCC------CCCcceEEEecC
Q 007635 166 FLIGDWYTRNHT--AL---------RTALDSGKDLDMPDGVLINGKGPYRYNT-T----LVP------DGIEYETINVDP 223 (595)
Q Consensus 166 l~l~d~~~~~~~--~~---------~~~~~~~~~~~~~d~~liNG~~~~~~~~-~----~~~------~~~~~~~~~v~~ 223 (595)
..+.++...... .. ...+..... .....+.|||+.+..... . ..+ .......++++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 001111000000 00 000000000 001268899998632100 0 000 001236789999
Q ss_pred CCEEEEEEEEcCCCceEEEEEeCccceeeeccCccc----cceeecEEEE-cCCcEEEEEEEcCCCCCcceEEEEeeec
Q 007635 224 GKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT----SQQNYTSFEI-HVGQSYSFLVTMDQNASSDYYIVASARF 297 (595)
Q Consensus 224 G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~----~p~~~~~l~i-~pG~R~dvlv~~~~~~g~~y~i~~~~~~ 297 (595)
|++++++++|......|.||+|||.|+|++.+|... +|...|++.+ .||+++.+.++++ .+| .|-++++...
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG-~W~~HCHil~ 456 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPG-PWFFHCHIEF 456 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCE-EEEEEESSHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCe-eeeEecCchh
Confidence 999999999654455899999999999999998752 4888999999 7999999999998 567 7888887643
No 59
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.42 E-value=7.4e-12 Score=137.28 Aligned_cols=239 Identities=13% Similarity=0.134 Sum_probs=151.3
Q ss_pred EEEEECCCCC---------CceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCCCCCCCCC-----CCCccCCCCeE
Q 007635 50 QVIAINGKFP---------GAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNW 114 (595)
Q Consensus 50 ~~~~~Ng~~P---------GP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 114 (595)
..++|||+.. -|+|+|++|+++++|+.|... ....+|++|..... -..||.+. ....|.|||++
T Consensus 192 d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR~ 270 (521)
T 1v10_A 192 DTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQRY 270 (521)
T ss_dssp SEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccceE
Confidence 4689999743 289999999999999999975 46788998876542 35788752 34669999999
Q ss_pred EEEEEecCceeeeEEeccchh---hhccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHH-----------HHH
Q 007635 115 TYQFQVKDQIGSFFYFPSLNL---QRVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHT-----------ALR 180 (595)
Q Consensus 115 tY~f~~~~~~Gt~wYH~H~~~---q~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~-----------~~~ 180 (595)
+..+++++.+|+||.+++... ....|+..+++.........|..... + ...+.+....... ...
T Consensus 271 dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~~ 348 (521)
T 1v10_A 271 SVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGAD 348 (521)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcce
Confidence 999999655799999998542 12234433444332211111110000 0 0000000000000 000
Q ss_pred H--HHhcCCCCCCCceEEEccCCCCCCCC-c----cCC------CCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCc
Q 007635 181 T--ALDSGKDLDMPDGVLINGKGPYRYNT-T----LVP------DGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH 247 (595)
Q Consensus 181 ~--~~~~~~~~~~~d~~liNG~~~~~~~~-~----~~~------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 247 (595)
. .+..+. ......+.|||+.+..... . ..+ .....+.++++.|++++++++| ...|.||+|||
T Consensus 349 ~~~~l~~~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh 424 (521)
T 1v10_A 349 INLNLRIGR-NATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGH 424 (521)
T ss_dssp EEEECCEEC-CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSC
T ss_pred EEEEEEEec-CCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccc
Confidence 0 000000 0011267899998632100 0 000 0012367899999999999999 34799999999
Q ss_pred cceeeeccCcc----ccceeecEEEE-cCCcEEEEEEEcCCCCCcceEEEEeeec
Q 007635 248 NLLLVETEGHY----TSQQNYTSFEI-HVGQSYSFLVTMDQNASSDYYIVASARF 297 (595)
Q Consensus 248 ~~~vi~~DG~~----~~p~~~~~l~i-~pG~R~dvlv~~~~~~g~~y~i~~~~~~ 297 (595)
.|+|++.+|.. .+|...|++.+ .+|+++.+.++++ .+| .|-++++...
T Consensus 425 ~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG-~W~~HCHi~~ 477 (521)
T 1v10_A 425 NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPG-PWFLHCHIDW 477 (521)
T ss_dssp CEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCE-EEEEEESCHH
T ss_pred eEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCe-eEEEeeChHH
Confidence 99999999865 35888999999 7999999999998 567 7888887643
No 60
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.40 E-value=9.1e-13 Score=114.12 Aligned_cols=105 Identities=17% Similarity=0.151 Sum_probs=79.1
Q ss_pred EEEEEEEEEEEe-----CCCCeeEEE-EEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCC
Q 007635 31 IFYDFKVSYITA-----SPLGVPQQV-IAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGT 104 (595)
Q Consensus 31 ~~~~~~v~~~~~-----~~dG~~~~~-~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~t 104 (595)
+.|.+.+..... ..+|..... ..+|++|++|.|++++||+|+++++|.... +||+.... .|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---
Confidence 455666655432 235666555 489999999999999999999999999755 56654431 122
Q ss_pred CCccCCCCeEEEEEEecCceeeeEEeccchhhhccCccccEEEcc
Q 007635 105 NCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINN 149 (595)
Q Consensus 105 q~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 149 (595)
+..+.||++++|.|++ +++|+||||||...+.. +|.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 4679999999999998 68999999998765433 3999999974
No 61
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.30 E-value=4.2e-12 Score=138.72 Aligned_cols=94 Identities=17% Similarity=0.220 Sum_probs=75.5
Q ss_pred CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCce
Q 007635 45 LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQI 124 (595)
Q Consensus 45 dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~ 124 (595)
+++...++++|++||+|+|++++||+|+++++|.++..-. +||+.... .|+ ++.|.||++++|.|++ +++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~p 566 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANP 566 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSC
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCC
Confidence 5678899999999999999999999999999998653211 36665432 122 3679999999999998 689
Q ss_pred eeeEEeccc---hhhhccCccccEEEccC
Q 007635 125 GSFFYFPSL---NLQRVSGGFGPVIINNR 150 (595)
Q Consensus 125 Gt~wYH~H~---~~q~~~Gl~G~liV~~~ 150 (595)
|+||||||. ..| .||+|.|+|+++
T Consensus 567 GtY~yhC~e~Cg~~H--~gM~G~IiV~p~ 593 (595)
T 1fwx_A 567 GVYWYYCQWFCHALH--MEMRGRMLVEPK 593 (595)
T ss_dssp EEEEEECCSCCSTTC--TTCEEEEEEECC
T ss_pred EEEEEECCCCCCCCc--cCCEEEEEEEcC
Confidence 999999993 234 399999999975
No 62
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.27 E-value=3.6e-10 Score=122.69 Aligned_cols=243 Identities=12% Similarity=0.089 Sum_probs=149.7
Q ss_pred EEEEEECCCC---------CCceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCCCCCCCCC-----CCCccCCCCe
Q 007635 49 QQVIAINGKF---------PGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWN 113 (595)
Q Consensus 49 ~~~~~~Ng~~---------PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~ 113 (595)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|..... -..||.+. ....|.|||+
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceE
Confidence 4679999962 3479999999999999999864 56788888876532 35788752 3456999999
Q ss_pred EEEEEEecCceeeeEEeccch--h-hhccCccccEEEccCCCCCCCCCCCCC-ceeEeeeecccccHHH-----------
Q 007635 114 WTYQFQVKDQIGSFFYFPSLN--L-QRVSGGFGPVIINNRKVIPIPFDQPEG-DIIFLIGDWYTRNHTA----------- 178 (595)
Q Consensus 114 ~tY~f~~~~~~Gt~wYH~H~~--~-q~~~Gl~G~liV~~~~~~~~~~~~~d~-e~~l~l~d~~~~~~~~----------- 178 (595)
++..+++.+..|.||.++... . ....|..-+++.........|...... .. ..+.+........
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT-KCLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS-SBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc-cccccccccccccccCCCccCCCC
Confidence 999999964469999998642 1 122233334443332111111100000 00 0001111000000
Q ss_pred HHHHHhcCCCCCCCceEEEccCCCCCCCC-c----cCC------CCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCc
Q 007635 179 LRTALDSGKDLDMPDGVLINGKGPYRYNT-T----LVP------DGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNH 247 (595)
Q Consensus 179 ~~~~~~~~~~~~~~d~~liNG~~~~~~~~-~----~~~------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 247 (595)
....+.-... .....+.|||+.+..-.. . ..+ .......+.++.|++++|.|.|......|.||+|||
T Consensus 326 ~d~~~~l~~~-~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 326 ADCNLNLSLG-FACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp SSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CcEEEEEEEE-ecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 0000000000 001258899988632100 0 000 001235789999999999998433445799999999
Q ss_pred cceeeeccCccc----cceeecEEEEcC-CcEEEEEEEcCCCCCcceEEEEeee
Q 007635 248 NLLLVETEGHYT----SQQNYTSFEIHV-GQSYSFLVTMDQNASSDYYIVASAR 296 (595)
Q Consensus 248 ~~~vi~~DG~~~----~p~~~~~l~i~p-G~R~dvlv~~~~~~g~~y~i~~~~~ 296 (595)
.|+|++.+|... .|...|++.+.+ |+.+.+.++++ .+| .+-++++..
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG-~W~~HCHi~ 456 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPG-PWFLHCHID 456 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCE-EEEEEESCH
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCe-eEEEEecch
Confidence 999999988643 588899999997 99999999998 567 777888764
No 63
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.27 E-value=8.1e-11 Score=127.12 Aligned_cols=237 Identities=14% Similarity=0.114 Sum_probs=156.3
Q ss_pred EEEEEEEEEEEeCCCCe-------------eEEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCC
Q 007635 31 IFYDFKVSYITASPLGV-------------PQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNS 96 (595)
Q Consensus 31 ~~~~~~v~~~~~~~dG~-------------~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~ 96 (595)
.+| |.++.-....+|. .-..++|||+. .|+|+|++|+ ++|+.|... ....+|++|..... -
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-I 255 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-V 255 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-E
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-E
Confidence 455 6666655454443 23578999996 5899999999 999999974 66789999876542 4
Q ss_pred CCCCCC----C--CCCccCCCCeEEEEEEecCceeeeEEeccchhhhccCcc-----cc---EEEccC-CCCCCC-----
Q 007635 97 WQDGVQ----G--TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGF-----GP---VIINNR-KVIPIP----- 156 (595)
Q Consensus 97 ~~DGv~----~--tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~-----G~---liV~~~-~~~~~~----- 156 (595)
..||.. . ....|.|||+++.-++++ +.|+|-.-++.... .|+. .. +.++.. .....|
T Consensus 256 a~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~ 332 (481)
T 3zx1_A 256 GTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDR--DKMMVKEEPNTLFLANINLKKENVELPKNLKI 332 (481)
T ss_dssp EETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCC--CCSSCCCCCCCEEEEEEEEECCCCCCCSCSCC
T ss_pred EcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccc--cCccccCCCCceeEEEEecCCCCccCCccccC
Confidence 678632 2 456699999999999995 67887776653221 1111 11 111110 001111
Q ss_pred ---CCCCCCceeEeeeeccccc-------HHHHHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCE
Q 007635 157 ---FDQPEGDIIFLIGDWYTRN-------HTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKT 226 (595)
Q Consensus 157 ---~~~~d~e~~l~l~d~~~~~-------~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~ 226 (595)
.+..+.+..+.++....+- .......+ ...++|||+.+. .+.+.++++.|++
T Consensus 333 ~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~iNG~~~~----------~~~~~~~~~~G~~ 394 (481)
T 3zx1_A 333 FKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIAL--------ASMFLINRKSYD----------LKRIDLSSKLGVV 394 (481)
T ss_dssp CCCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHHH--------HTTEEETTBCCC----------TTCCCEEEETTCC
T ss_pred CCCCCCCCcEEEEEEeccchhcccccccccccccccc--------cceeEECCEeCC----------CCCceEEeCCCCE
Confidence 1111223333333211100 00000000 125899999872 1246799999999
Q ss_pred EEEEEEEcCCCceEEEEEeCccceeeec--cCcccc---ceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeee
Q 007635 227 YRVRVHNVGTSTSLNFRIQNHNLLLVET--EGHYTS---QQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (595)
Q Consensus 227 ~rlRliN~~~~~~~~~~i~gh~~~vi~~--DG~~~~---p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~ 296 (595)
++|+|.|.+.. .|.||||||.|+|++. +|.... +...|++.+.|||++.|.++++ .+| .|-++++..
T Consensus 395 v~w~l~N~~~~-~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG-~w~~HCHil 466 (481)
T 3zx1_A 395 EDWIVINKSHM-DHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKG-LRMYHCHIL 466 (481)
T ss_dssp EEEEEEECSSS-CEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCE-EEEEEESSH
T ss_pred EEEEEEcCCCC-ceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCe-eEEEEcCCh
Confidence 99999997654 7999999999999999 897653 5678999999999999999997 567 788888653
No 64
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.21 E-value=9.6e-10 Score=120.72 Aligned_cols=241 Identities=10% Similarity=0.136 Sum_probs=147.2
Q ss_pred EEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCCCCCCCCC-----CCCccCCCCeEEEEEEecC
Q 007635 49 QQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNWTYQFQVKD 122 (595)
Q Consensus 49 ~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~tY~f~~~~ 122 (595)
...++|||+. .|+|+|++|+++++|+.|... ....+|++|..+.. -..||.+. ....|.|||+++..+++++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCC
Confidence 3578999985 699999999999999999975 46678888865532 35788752 3456999999999999963
Q ss_pred c-eeeeEEeccchhhhcc----C--ccc-cEEEccCC-CCCCCCCCCCCceeEeeeeccccc----------HHHHHHHH
Q 007635 123 Q-IGSFFYFPSLNLQRVS----G--GFG-PVIINNRK-VIPIPFDQPEGDIIFLIGDWYTRN----------HTALRTAL 183 (595)
Q Consensus 123 ~-~Gt~wYH~H~~~q~~~----G--l~G-~liV~~~~-~~~~~~~~~d~e~~l~l~d~~~~~----------~~~~~~~~ 183 (595)
+ .|.||..+.......+ + ..+ +++..+.. ..+.+.. ..++.-.+.|..... ...+...+
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~--~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~ 322 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNY--VDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDV 322 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCC--CSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCc--ccccccccccccceeCCCCCCCCCCCeEEEEEE
Confidence 3 4789998874422100 1 111 22222211 1111100 000000000000000 00000000
Q ss_pred hcCCCCCCCceEEEccCCCCCCCCcc-------------CCC--CCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCcc
Q 007635 184 DSGKDLDMPDGVLINGKGPYRYNTTL-------------VPD--GIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHN 248 (595)
Q Consensus 184 ~~~~~~~~~d~~liNG~~~~~~~~~~-------------~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~ 248 (595)
...........+.|||+.+..- ..+ .+. ......+.++.|++++|.|.|.+.. .|.||+|||.
T Consensus 323 ~~~~~~~~~~~~~iNg~s~~~~-~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~-~HP~HLHGh~ 400 (534)
T 1zpu_A 323 VMDNLKNGVNYAFFNNITYTAP-KVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG-THPFHLHGHA 400 (534)
T ss_dssp EEEECTTSCEEEEETTBCCCCC-SSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS-CEEEEETTCC
T ss_pred EeeccCCceeEEEECCCcccCC-CCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC-CCCeEecCCc
Confidence 0000001123578999876321 000 000 0013468999999999999998755 7999999999
Q ss_pred ceeeeccCc-----------c---------ccceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeec
Q 007635 249 LLLVETEGH-----------Y---------TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (595)
Q Consensus 249 ~~vi~~DG~-----------~---------~~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~ 297 (595)
|+|++.++. + ..|...|++.+.||+.+.|.++++ .+| .|-++++...
T Consensus 401 F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG-~W~~HCHi~~ 467 (534)
T 1zpu_A 401 FQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPG-VWFFHCHIEW 467 (534)
T ss_dssp EEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCE-EEEEEECCHH
T ss_pred eEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCe-eEEEEeCchh
Confidence 999998753 1 236788999999999999999998 568 7888888643
No 65
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.20 E-value=3.5e-11 Score=102.78 Aligned_cols=78 Identities=12% Similarity=0.122 Sum_probs=63.0
Q ss_pred CCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCC-CCCccCCCCeEEEEEEecCceeeeEEeccc
Q 007635 55 NGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSL 133 (595)
Q Consensus 55 Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~ 133 (595)
+..|..+.|++++||+|++ .|..+.++++|+++. +||... .+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 5567789999999999654 699888899998863 356654 556799999999988 479999999986
Q ss_pred hhhhccCccccEEEc
Q 007635 134 NLQRVSGGFGPVIIN 148 (595)
Q Consensus 134 ~~q~~~Gl~G~liV~ 148 (595)
.. ||.|.|+|+
T Consensus 95 H~----gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP----FMRGKVVVE 105 (105)
T ss_dssp CT----TCEEEEEEC
T ss_pred CC----CCEEEEEEC
Confidence 32 999999985
No 66
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.19 E-value=4.4e-10 Score=121.34 Aligned_cols=248 Identities=15% Similarity=0.083 Sum_probs=153.5
Q ss_pred EEEEEEEEEEEeCCCCe--------------eEEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeec-CCCccCC
Q 007635 31 IFYDFKVSYITASPLGV--------------PQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTW-PGIQMRR 94 (595)
Q Consensus 31 ~~~~~~v~~~~~~~dG~--------------~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~-HG~~~~~ 94 (595)
.++.+.+++-....+|. ....++|||+. .|.+.+ +|+++++++.|... ....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 36667776554444442 23578999985 588876 67899999999864 5567777 6754321
Q ss_pred CCCCCCCC----C--CCCccCCCCeEEEEEEecCceeeeEEeccchhhhccCcc-----c---cEEEccC---CCCCCCC
Q 007635 95 NSWQDGVQ----G--TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSGGF-----G---PVIINNR---KVIPIPF 157 (595)
Q Consensus 95 ~~~~DGv~----~--tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~-----G---~liV~~~---~~~~~~~ 157 (595)
-..||.+ . ....|.|||+++.-++++ +.++|+.-+..... .|+. . .+-|.+. .....|.
T Consensus 229 -Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 304 (488)
T 3od3_A 229 -IASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQ--MGMAIAPFDKPHPVMRIQPIAISASGALPD 304 (488)
T ss_dssp -EEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSS--TTTTSTTTTSCEEEEEEEEEEEECCCCCCS
T ss_pred -EEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCC--CCcccccccCccceeEecccccCCCCCCCc
Confidence 3578853 2 456699999999999995 57788776542111 1111 1 1223221 1111111
Q ss_pred -----C---C----CCCceeEeeee-cccccHHHHHH-H----Hh------------cCCC--------CCCCceEEEcc
Q 007635 158 -----D---Q----PEGDIIFLIGD-WYTRNHTALRT-A----LD------------SGKD--------LDMPDGVLING 199 (595)
Q Consensus 158 -----~---~----~d~e~~l~l~d-~~~~~~~~~~~-~----~~------------~~~~--------~~~~d~~liNG 199 (595)
+ . ..+++.+.+.. +.......+.+ + +. .|.. ......++|||
T Consensus 305 ~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING 384 (488)
T 3od3_A 305 TLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKING 384 (488)
T ss_dssp CCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETT
T ss_pred ccccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECC
Confidence 0 0 11223333321 00000000000 0 00 0000 00012479999
Q ss_pred CCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccc---eeecEEEEcCCcEEE
Q 007635 200 KGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQ---QNYTSFEIHVGQSYS 276 (595)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p---~~~~~l~i~pG~R~d 276 (595)
+.+.. +.+.++++.|+++||+|+|.+....|.||||||.|+|++.||....+ ...|++.+. |++..
T Consensus 385 ~~~~~----------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~ 453 (488)
T 3od3_A 385 QAFDM----------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSE 453 (488)
T ss_dssp BCCCT----------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEE
T ss_pred eeCCC----------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEE
Confidence 99731 23668999999999999999866689999999999999999987653 468999999 99999
Q ss_pred EEEEcCCCC---CcceEEEEeee
Q 007635 277 FLVTMDQNA---SSDYYIVASAR 296 (595)
Q Consensus 277 vlv~~~~~~---g~~y~i~~~~~ 296 (595)
|++++++.+ | .|-++++..
T Consensus 454 i~~~f~~~~~~~G-~~m~HCH~l 475 (488)
T 3od3_A 454 VLVKFNHDAPKEH-AYMAHCHLL 475 (488)
T ss_dssp EEECBCSCCCGGG-CEEEEESSH
T ss_pred EEEEeccCCCCCC-CEEEeCCch
Confidence 999998643 4 687887653
No 67
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.19 E-value=4e-10 Score=124.47 Aligned_cols=227 Identities=11% Similarity=0.075 Sum_probs=137.2
Q ss_pred eEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCCCCCCCCC-----CCCccCCCCeEEEEEEec-CceeeeEEeccch
Q 007635 62 VLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNWTYQFQVK-DQIGSFFYFPSLN 134 (595)
Q Consensus 62 ~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~tY~f~~~-~~~Gt~wYH~H~~ 134 (595)
+|+|++|+++++|+.|... ....+|++|..... -..||.+. ....|.|||+++..+++. +..|.||-+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999965 45678888875532 35788652 446699999999999984 3479999999854
Q ss_pred hhhccCc--cccEEEccCCCCCCCCCCCCCceeEeeeecccccHHHHHHHHhc----CC--CC----------------C
Q 007635 135 LQRVSGG--FGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTALRTALDS----GK--DL----------------D 190 (595)
Q Consensus 135 ~q~~~Gl--~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~----~~--~~----------------~ 190 (595)
.--.+.. .+.|..........+... ....+ .|. +........+.. .. .. .
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~p----~~~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 357 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQTP----AWD-DFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVIN 357 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCCCC----CTT-CHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEET
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCCCC----ccc-cccccccccccccccCCCCCCCCCCcEEEEEEEeeccCC
Confidence 2101111 223333322210001000 00000 000 000000000000 00 00 0
Q ss_pred CCceEEEccCCCCCCCC----------------------------ccCCCC-----CcceEEEecCCCEEEEEEEEcCC-
Q 007635 191 MPDGVLINGKGPYRYNT----------------------------TLVPDG-----IEYETINVDPGKTYRVRVHNVGT- 236 (595)
Q Consensus 191 ~~d~~liNG~~~~~~~~----------------------------~~~~~~-----~~~~~~~v~~G~~~rlRliN~~~- 236 (595)
....+.|||+.+..... ...+.. .....+.++.|++++|.|.|.+.
T Consensus 358 ~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~ 437 (552)
T 1aoz_A 358 GYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMM 437 (552)
T ss_dssp TEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCS
T ss_pred CeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCccc
Confidence 01246788875421100 000000 01235889999999999999875
Q ss_pred ----CceEEEEEeCccceeeec-cCcc----------ccceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeec
Q 007635 237 ----STSLNFRIQNHNLLLVET-EGHY----------TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (595)
Q Consensus 237 ----~~~~~~~i~gh~~~vi~~-DG~~----------~~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~ 297 (595)
...|.||+|||.|+|++. +|.+ ..|...|++.+.+|+.+.+.++++ .+| .+-++++...
T Consensus 438 ~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG-~W~~HCHi~~ 511 (552)
T 1aoz_A 438 KENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPG-VWAFHCHIEP 511 (552)
T ss_dssp STTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCE-EEEEEESSHH
T ss_pred ccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCe-EEEEEeeehh
Confidence 346999999999999998 4653 247789999999999999999998 567 7778887653
No 68
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.18 E-value=1.1e-09 Score=119.05 Aligned_cols=243 Identities=10% Similarity=0.083 Sum_probs=148.2
Q ss_pred EEEEEECCCC--------CCceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCCCCCCCCC-----CCCccCCCCeE
Q 007635 49 QQVIAINGKF--------PGAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNW 114 (595)
Q Consensus 49 ~~~~~~Ng~~--------PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 114 (595)
...++|||+- +-|.|+|++|+++++|+.|... ....+|++|..... -..||.+. ....|.|||++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEE
Confidence 4678999973 3579999999999999999865 56788998876542 35788752 34569999999
Q ss_pred EEEEEecCceeeeEEeccch--hh-hccCccccEEEccCCCCCCCCCCCCCceeEeeeecccccHHH-----------HH
Q 007635 115 TYQFQVKDQIGSFFYFPSLN--LQ-RVSGGFGPVIINNRKVIPIPFDQPEGDIIFLIGDWYTRNHTA-----------LR 180 (595)
Q Consensus 115 tY~f~~~~~~Gt~wYH~H~~--~q-~~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~-----------~~ 180 (595)
+..+++.+..|.||-.+... .+ ...|..-+++.........|........ ..+.+........ ..
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 99999965569999988632 11 1122222333332211111110000000 0011111000000 00
Q ss_pred HHHhcCCCCCCCceEEEccCCCCCCC-Cc----cCC------CCCcceEEEecCCCEEEEEEEEcC--CCceEEEEEeCc
Q 007635 181 TALDSGKDLDMPDGVLINGKGPYRYN-TT----LVP------DGIEYETINVDPGKTYRVRVHNVG--TSTSLNFRIQNH 247 (595)
Q Consensus 181 ~~~~~~~~~~~~d~~liNG~~~~~~~-~~----~~~------~~~~~~~~~v~~G~~~rlRliN~~--~~~~~~~~i~gh 247 (595)
..+.-.. ......+.|||+.+..-. .. ..+ .....+.+.++.|++++|.|.|.+ ....|.||+|||
T Consensus 324 ~~~~l~~-~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 324 KAINMAF-NFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp EEEECCE-EECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred EEEEEEE-EecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 0000000 001125789998863210 00 000 001235789999999999999532 234799999999
Q ss_pred cceeeeccCccc----cceeecEEEEcC---CcEEEEEEEcCCCCCcceEEEEeee
Q 007635 248 NLLLVETEGHYT----SQQNYTSFEIHV---GQSYSFLVTMDQNASSDYYIVASAR 296 (595)
Q Consensus 248 ~~~vi~~DG~~~----~p~~~~~l~i~p---G~R~dvlv~~~~~~g~~y~i~~~~~ 296 (595)
.|+|++.+|... .|...|++.+.+ |+.+.+.++++ .+| .+-++++..
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG-~W~~HCHi~ 456 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPG-PWFLHCHID 456 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCE-EEEEEESSH
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCc-eEEEEeCCh
Confidence 999999887543 588899999986 99999999998 567 777788764
No 69
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.13 E-value=1.6e-09 Score=119.66 Aligned_cols=245 Identities=9% Similarity=0.027 Sum_probs=147.6
Q ss_pred EEEEEECCCCC--------CceEEecCCCEEEEEEEeCCC-CCceeecCCCccCCCCCCCCCCC-----CCCccCCCCeE
Q 007635 49 QQVIAINGKFP--------GAVLNATTNNNIVINVQNDLD-ESLLMTWPGIQMRRNSWQDGVQG-----TNCPIPSQWNW 114 (595)
Q Consensus 49 ~~~~~~Ng~~P--------GP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGv~~-----tq~~I~PG~~~ 114 (595)
...++|||+.. -|+|++++|+++++++.|... ....+|++|..+.. -..||.+. ....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEE
Confidence 35789999863 379999999999999999975 46789998876532 35788762 34669999999
Q ss_pred EEEEEecCceeeeEEeccc--hhhh--ccCc--cccEEEccCCCCCCCCC----CCC----Cc---eeEeeeeccc---c
Q 007635 115 TYQFQVKDQIGSFFYFPSL--NLQR--VSGG--FGPVIINNRKVIPIPFD----QPE----GD---IIFLIGDWYT---R 174 (595)
Q Consensus 115 tY~f~~~~~~Gt~wYH~H~--~~q~--~~Gl--~G~liV~~~~~~~~~~~----~~d----~e---~~l~l~d~~~---~ 174 (595)
+..+++++..|.||..... .... .... .+.|....... ..|.. ..+ .+ .++.-.+.-. .
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~-~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPG-GLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCC-SCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCC-CCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 9999996557899998765 2111 1111 22232322211 11110 000 00 0000000000 0
Q ss_pred cHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCcc------CCC---CCcceEEEecCCCEEEEEEEEcCC----CceEE
Q 007635 175 NHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTL------VPD---GIEYETINVDPGKTYRVRVHNVGT----STSLN 241 (595)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~------~~~---~~~~~~~~v~~G~~~rlRliN~~~----~~~~~ 241 (595)
....+...+...........+.|||+.+......+ .+. ......+.++.++++++.++|... ...|.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP 432 (559)
T 2q9o_A 353 KRPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHP 432 (559)
T ss_dssp CCGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEE
T ss_pred cceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCc
Confidence 00000000000000111246899999863210000 000 011245888888888887777754 56899
Q ss_pred EEEeCccceeeeccC---------c-c-----------ccceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeec
Q 007635 242 FRIQNHNLLLVETEG---------H-Y-----------TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (595)
Q Consensus 242 ~~i~gh~~~vi~~DG---------~-~-----------~~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~ 297 (595)
||+|||.|+|++.++ . + ..|...|++.+.+|+++.+.++++ .+| .|-++++...
T Consensus 433 ~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG-~W~~HCHil~ 507 (559)
T 2q9o_A 433 MHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPG-AWLFHCHIAW 507 (559)
T ss_dssp EEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCE-EEEEEECCHH
T ss_pred EEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCe-eEEEEecchh
Confidence 999999999999986 2 2 136688999999999999999988 568 7888887653
No 70
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.12 E-value=8.1e-10 Score=118.74 Aligned_cols=229 Identities=11% Similarity=0.037 Sum_probs=147.5
Q ss_pred EEEEEEEEEEEeCC-------------CCeeEEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeec--CC---Cc
Q 007635 31 IFYDFKVSYITASP-------------LGVPQQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTW--PG---IQ 91 (595)
Q Consensus 31 ~~~~~~v~~~~~~~-------------dG~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~--HG---~~ 91 (595)
+++.|.+++-.... .|.....++|||+. .|+|+|++| ++++++.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56777776544332 12234578999985 699999999 99999999975 5678999 77 43
Q ss_pred cCCCCCCCCCCC------CCCccCCCCeEEEEEEecCceeeeEEeccchhhhccC---c----------ccc--EEEccC
Q 007635 92 MRRNSWQDGVQG------TNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVSG---G----------FGP--VIINNR 150 (595)
Q Consensus 92 ~~~~~~~DGv~~------tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~G---l----------~G~--liV~~~ 150 (595)
.. --..||.+. ....|.|||+++..++++ .|.||..++.......+ + ... |.+...
T Consensus 216 ~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MR-LIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EE-EEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EE-EEEeCCCccCCceEeceEEECCcceEEEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 32 135788642 345689999999999985 47899988743211010 1 111 122111
Q ss_pred CCCCCC--CC-------CCCCceeEeeeecccccHHHHHHHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEE-
Q 007635 151 KVIPIP--FD-------QPEGDIIFLIGDWYTRNHTALRTALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETIN- 220 (595)
Q Consensus 151 ~~~~~~--~~-------~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~- 220 (595)
...+.| .. ....+..+.+. .+ ...+.|||+.+.. +.+.++
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~---------------~~-----~~~~~iNg~~~~~----------~~p~~~~ 342 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALS---------------LS-----GMQWTINGMFWNA----------SNPLFEH 342 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEE---------------EE-----TTEEEETTBCCCT----------TCTTCCC
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEe---------------CC-----CceeeECCCcCCC----------CCCceec
Confidence 110000 00 00011111111 00 1258999998731 124466
Q ss_pred ecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccc------------cc---eeecEEEEcCCcEEEEEEEcC---
Q 007635 221 VDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT------------SQ---QNYTSFEIHVGQSYSFLVTMD--- 282 (595)
Q Consensus 221 v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~------------~p---~~~~~l~i~pG~R~dvlv~~~--- 282 (595)
++.|++++|+|.|.+....|.||+|||.|+|++.+|... .| ...|++.+.||+++.+.+++.
T Consensus 343 ~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~ 422 (448)
T 3aw5_A 343 VSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKK 422 (448)
T ss_dssp EEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGG
T ss_pred cCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccC
Confidence 899999999999998445799999999999999999764 23 578999999999999996665
Q ss_pred CCCCcceEEEEeee
Q 007635 283 QNASSDYYIVASAR 296 (595)
Q Consensus 283 ~~~g~~y~i~~~~~ 296 (595)
.. . .|-++++..
T Consensus 423 ad-n-pw~~HCHil 434 (448)
T 3aw5_A 423 RG-Q-LFPFHCHNL 434 (448)
T ss_dssp TT-C-EEEEEESSH
T ss_pred CC-C-cEEEEcCCh
Confidence 21 2 355666653
No 71
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.11 E-value=1.2e-10 Score=99.47 Aligned_cols=83 Identities=10% Similarity=0.127 Sum_probs=63.9
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCC-----CCCCccCCCCeEEEEEEecCceeeeEEeccch
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ-----GTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN 134 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~ 134 (595)
.+.|++++||+|++ .|....++++|+|+..... .+|.. .+...+.||++++|.|++++++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--
Confidence 47999999998755 5887678888888764321 23320 123458999999999987568999999999
Q ss_pred hhhccCccccEEEcc
Q 007635 135 LQRVSGGFGPVIINN 149 (595)
Q Consensus 135 ~q~~~Gl~G~liV~~ 149 (595)
.|...||.|.|+|.+
T Consensus 92 ~H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 92 PHRGAGMVGKITVAG 106 (106)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred ChhhcCcEEEEEEcC
Confidence 778889999999963
No 72
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.05 E-value=1.2e-10 Score=104.65 Aligned_cols=94 Identities=7% Similarity=0.018 Sum_probs=71.4
Q ss_pred eeeecCCcEEEEEEecCCCC-ceeeeecCceEEEE------eeccc---ccCCCCCCCCCcCCCCcccEEEECCCcEEEE
Q 007635 434 LINATYKGFIEIILQNNDTK-MQSFHMDGYSFFVV------GMDFG---IWTESNRNSYNKWDAISKCTTEVYPGAWTAI 503 (595)
Q Consensus 434 v~~~~~g~~ve~vl~N~~~~-~HP~HlHG~~F~Vv------~~~~G---~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~I 503 (595)
.++++.|++|+|+|.|.+.. .|.||+|+..+.+. .+..+ .+.+.. ....++||..|.|+....|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCCEEEE
Confidence 46789999999999999888 89999998643110 00001 111100 1135789999999999999
Q ss_pred EEEeCCceeeeeeeccccceeccceeEEEEe
Q 007635 504 LVSLDNVGVWNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 504 rf~adNpG~W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
.|.+++||.|.||||+..|+. ||...+.|.
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999988988 999988873
No 73
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.05 E-value=4.5e-09 Score=116.43 Aligned_cols=231 Identities=7% Similarity=0.002 Sum_probs=142.9
Q ss_pred EEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeecCCC-------ccCCCCCCCCCC----C--C------CCccC
Q 007635 50 QVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGI-------QMRRNSWQDGVQ----G--T------NCPIP 109 (595)
Q Consensus 50 ~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~-------~~~~~~~~DGv~----~--t------q~~I~ 109 (595)
..++|||+. .|.+.|++| ++++|+.|... ....+++.|. ... --..||.+ . . ...|.
T Consensus 255 d~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l~ 331 (612)
T 2g23_A 255 PYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSAA 331 (612)
T ss_dssp SEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEEC
T ss_pred CEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEEC
Confidence 568999995 699999999 99999999875 5667777654 111 12478864 2 2 45689
Q ss_pred CCCeEEEEEEecCcee-eeEEeccchhhhc------cCc-ccc---EEEccCC-CC--CCCC------CCCCCc-----e
Q 007635 110 SQWNWTYQFQVKDQIG-SFFYFPSLNLQRV------SGG-FGP---VIINNRK-VI--PIPF------DQPEGD-----I 164 (595)
Q Consensus 110 PG~~~tY~f~~~~~~G-t~wYH~H~~~q~~------~Gl-~G~---liV~~~~-~~--~~~~------~~~d~e-----~ 164 (595)
|||+++.-+++.+.+| +++-......... +|. .+. |.|..+. .. ..|- .....+ .
T Consensus 332 pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r 411 (612)
T 2g23_A 332 PAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHR 411 (612)
T ss_dssp TTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEE
T ss_pred CcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCccccccee
Confidence 9999999999965456 4666654221110 011 111 4454322 11 1111 000000 1
Q ss_pred eEeee------------ecccccHHHHHH-HHhcC------CCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCC
Q 007635 165 IFLIG------------DWYTRNHTALRT-ALDSG------KDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGK 225 (595)
Q Consensus 165 ~l~l~------------d~~~~~~~~~~~-~~~~~------~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~ 225 (595)
.+++. -|.......-.. .+... ........+.|||+.+. +.+.++++.|+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~-----------~~~~~~v~~G~ 480 (612)
T 2g23_A 412 LIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN-----------DGLGFTIGEGT 480 (612)
T ss_dssp EEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-----------SCCCEEEETTC
T ss_pred EEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC-----------CCCceEecCCC
Confidence 12221 011110000000 00000 00011235889999872 34789999999
Q ss_pred EEEEEEEEcCCCceEEEEEeCccceeeeccCc------------------------cc---cceeecEEEEcCCcEEEEE
Q 007635 226 TYRVRVHNVGTSTSLNFRIQNHNLLLVETEGH------------------------YT---SQQNYTSFEIHVGQSYSFL 278 (595)
Q Consensus 226 ~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~------------------------~~---~p~~~~~l~i~pG~R~dvl 278 (595)
+++|+|+|.+.. .|.||||||.|+|++.+|. .. ++...|++.+.||+++.|.
T Consensus 481 ~v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~ 559 (612)
T 2g23_A 481 HEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEE
Confidence 999999999855 7999999999999987531 11 2336899999999999999
Q ss_pred EEcCCCCCcceEEEEeee
Q 007635 279 VTMDQNASSDYYIVASAR 296 (595)
Q Consensus 279 v~~~~~~g~~y~i~~~~~ 296 (595)
++++..+| .|-++++..
T Consensus 560 ~~~~~~pG-~w~~HCHil 576 (612)
T 2g23_A 560 GKFDGAYG-RFMYHCHLL 576 (612)
T ss_dssp EECCSCCE-EEEEEESSH
T ss_pred EEeCCCCc-cEEEEeCch
Confidence 99996678 888888764
No 74
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.00 E-value=5e-09 Score=114.86 Aligned_cols=231 Identities=13% Similarity=0.025 Sum_probs=138.1
Q ss_pred EEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeecCC-------CccCCCCCCCCC----CC--CCCccCCCCeE
Q 007635 49 QQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPG-------IQMRRNSWQDGV----QG--TNCPIPSQWNW 114 (595)
Q Consensus 49 ~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG-------~~~~~~~~~DGv----~~--tq~~I~PG~~~ 114 (595)
...++|||+ +.|.|.|+.| ++++|+.|... ....++++| ..+. --..||. |. ....|.|||++
T Consensus 201 gd~~lvNG~-~~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR~ 277 (534)
T 3abg_A 201 GDVIHVNGQ-PWPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAERY 277 (534)
T ss_dssp CSEEEETTE-ESCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCEE
T ss_pred CceeccCCc-cCceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccEE
Confidence 357899998 4799999985 99999999975 456788876 2221 1357885 22 45669999999
Q ss_pred EEEEEecCcee-eeEEeccchhhhccC-------ccccEEEccCCCCCCCCCCCCCceeEeeeecc-cccHHHHHHHHhc
Q 007635 115 TYQFQVKDQIG-SFFYFPSLNLQRVSG-------GFGPVIINNRKVIPIPFDQPEGDIIFLIGDWY-TRNHTALRTALDS 185 (595)
Q Consensus 115 tY~f~~~~~~G-t~wYH~H~~~q~~~G-------l~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~-~~~~~~~~~~~~~ 185 (595)
+.-+++++.+| +||...........| ..+.+-.........+. ....+..+.... ..........+.-
T Consensus 278 dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~~ 354 (534)
T 3abg_A 278 EVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFRF 354 (534)
T ss_dssp EEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEEC
T ss_pred EEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEEE
Confidence 99999864467 688765321000000 11122222111100000 000000000000 0000000000000
Q ss_pred CCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeec-cCcc---c--
Q 007635 186 GKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVET-EGHY---T-- 259 (595)
Q Consensus 186 ~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~-DG~~---~-- 259 (595)
+ .....++|||+.+... .....+.++.|++++|.|.|.+....|.||||||.|+|++. +|.. .
T Consensus 355 ~---~~~~~w~iNG~~f~~~--------~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~ 423 (534)
T 3abg_A 355 G---RTGPTWTINGVAFADV--------QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMP 423 (534)
T ss_dssp S---CCCSTTCCCCBTTBCT--------TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCS
T ss_pred e---ccCceeEECCcccCCC--------CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCc
Confidence 0 0113578999986210 01124679999999999999886557999999999999998 6631 1
Q ss_pred -cceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeec
Q 007635 260 -SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (595)
Q Consensus 260 -~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~ 297 (595)
+....|++.+.||+++.|.+.+.+.+| .|-++++...
T Consensus 424 ~~~~~rDTV~v~pg~~v~I~~~~adnpG-~w~~HCHil~ 461 (534)
T 3abg_A 424 YESGLKDVVWLGRRETVVVEAHYAPFPG-VYMFHCHNLI 461 (534)
T ss_dssp GGGSCBSEECCCSSEEEEEEEECCSCCE-EEEEEESCHH
T ss_pred cccCCcCeEEcCCCCEEEEEEEECCCCc-cEEEecChHH
Confidence 124589999999999999998433678 8888888653
No 75
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=98.99 E-value=5.5e-09 Score=114.30 Aligned_cols=217 Identities=12% Similarity=0.045 Sum_probs=137.7
Q ss_pred EEEEEECCCCCCceEEecCCCEEEEEEEeCCC-CCceeecCCC-ccCCCCCCCCCC----C--CCCccCCCCeEEEEEEe
Q 007635 49 QQVIAINGKFPGAVLNATTNNNIVINVQNDLD-ESLLMTWPGI-QMRRNSWQDGVQ----G--TNCPIPSQWNWTYQFQV 120 (595)
Q Consensus 49 ~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~-~~~siH~HG~-~~~~~~~~DGv~----~--tq~~I~PG~~~tY~f~~ 120 (595)
-..++|||+. .|.|.++.| ++++|+.|... ....+|++|. .+. --..||.+ . ....|.|||+++..+++
T Consensus 230 ~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~-via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~ 306 (513)
T 2wsd_A 230 GETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFI-QIGSDGGLLPRSVKLNSFSLAPAERYDIIIDF 306 (513)
T ss_dssp CSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEE-EEEETTEEEEEEEEESEEEECTTCEEEEEEEC
T ss_pred cceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEE-EEccCCCcccCceEeCeEEECCeeeEEEEEEC
Confidence 3678999986 699999985 99999999975 4567888776 332 23578843 2 34568999999999998
Q ss_pred cCceeeeEE-eccch--hhhccCccccEE-EccCC--CCC----CCCCCC----------CCceeEeeeecccccHHHHH
Q 007635 121 KDQIGSFFY-FPSLN--LQRVSGGFGPVI-INNRK--VIP----IPFDQP----------EGDIIFLIGDWYTRNHTALR 180 (595)
Q Consensus 121 ~~~~Gt~wY-H~H~~--~q~~~Gl~G~li-V~~~~--~~~----~~~~~~----------d~e~~l~l~d~~~~~~~~~~ 180 (595)
++.+|.++. .+-.. .....+....|+ .+... ..+ .|.... +.+..+.+...
T Consensus 307 ~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~--------- 377 (513)
T 2wsd_A 307 TAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT--------- 377 (513)
T ss_dssp GGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE---------
T ss_pred CCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee---------
Confidence 644676332 21110 000011112222 22111 000 010000 00011111100
Q ss_pred HHHhcCCCCCCCceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCc---
Q 007635 181 TALDSGKDLDMPDGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGH--- 257 (595)
Q Consensus 181 ~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~--- 257 (595)
++. .....++|||+.+. +...+.++.|++++|+|.|.+.. .|.||+|||.|+|++.+|.
T Consensus 378 --~~~----~g~~~~~iNg~~~~-----------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~ 439 (513)
T 2wsd_A 378 --QDE----YGRPVLLLNNKRWH-----------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIA 439 (513)
T ss_dssp --ECT----TSCEEEEETTBCTT-----------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHH
T ss_pred --cCC----CCCceEeECCccCC-----------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccc
Confidence 000 01125789999862 12457899999999999998765 7999999999999998752
Q ss_pred ------------c------ccceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeee
Q 007635 258 ------------Y------TSQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASAR 296 (595)
Q Consensus 258 ------------~------~~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~ 296 (595)
. -++...|++.+.||+++.|.+++++.+| .|-++++..
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG-~w~~HCHil 495 (513)
T 2wsd_A 440 RYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSG-RYVWHCHAL 495 (513)
T ss_dssp HHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCE-EEEEEESCH
T ss_pred cccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCC-CEEEEcCCh
Confidence 0 0234789999999999999999965678 888888764
No 76
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.99 E-value=2.1e-10 Score=97.76 Aligned_cols=85 Identities=13% Similarity=0.026 Sum_probs=65.6
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEe-CCce
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSL-DNVG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~a-dNpG 511 (595)
..+.++.|+.|+| .|.+...|++|+||..|... .|.. .+....++..+.||+...++|.+ ++||
T Consensus 19 ~~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~~----------~~~~~~~~~~i~pG~~~~~~f~~~~~~G 83 (105)
T 3cvb_A 19 ANVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKEL----------ADKLSHSQLMFSPGESYEITFSSDFPAG 83 (105)
T ss_dssp SEEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHHH----------HHHHCEEEEECSTTCEEEEEECTTSCSE
T ss_pred CEEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---cccc----------cccccccccccCCCCeEEEEEecCCCCe
Confidence 3578899999876 48878899999999765331 0100 00123578899999999999998 7999
Q ss_pred eeeeeeccccceeccceeEEEEe
Q 007635 512 VWNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 512 ~W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
.|.||||. |...||...+.|.
T Consensus 84 ~y~y~C~~--H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 84 TYTYYCAP--HRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECTT--TGGGTCEEEEEEC
T ss_pred eEEEEeCC--chhcCCEEEEEEc
Confidence 99999994 8889999999885
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.96 E-value=2.9e-09 Score=95.61 Aligned_cols=90 Identities=10% Similarity=0.047 Sum_probs=67.7
Q ss_pred CCCCceEEecCCCEEEEEEEeCCCC-CceeecCCCcc-----------------CCCCCCCCCC-CCCCccCCCCeEEEE
Q 007635 57 KFPGAVLNATTNNNIVINVQNDLDE-SLLMTWPGIQM-----------------RRNSWQDGVQ-GTNCPIPSQWNWTYQ 117 (595)
Q Consensus 57 ~~PGP~i~v~~Gd~v~v~v~N~l~~-~~siH~HG~~~-----------------~~~~~~DGv~-~tq~~I~PG~~~tY~ 117 (595)
+|-.+.|++++||+|+++++|.-.. ++.++.|+... ...+..+... .....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 5556799999999999999999766 78888887421 0000000000 112348999999999
Q ss_pred EEecCceeeeEEeccchhhhccCccccEEEc
Q 007635 118 FQVKDQIGSFFYFPSLNLQRVSGGFGPVIIN 148 (595)
Q Consensus 118 f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 148 (595)
|++ +++|+|+||||...|.. ||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 998 48999999999988888 999999984
No 78
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.86 E-value=1.4e-08 Score=91.33 Aligned_cols=92 Identities=12% Similarity=0.148 Sum_probs=67.3
Q ss_pred CCCCceEEecCCCEEEEEEEe--CCCCCceeecCCCc------------cC-CCCC---CCCCC--CCCCccCCCCeEEE
Q 007635 57 KFPGAVLNATTNNNIVINVQN--DLDESLLMTWPGIQ------------MR-RNSW---QDGVQ--GTNCPIPSQWNWTY 116 (595)
Q Consensus 57 ~~PGP~i~v~~Gd~v~v~v~N--~l~~~~siH~HG~~------------~~-~~~~---~DGv~--~tq~~I~PG~~~tY 116 (595)
+|-.+.|++++||+|+++++| +.+.++.++.+... .. ...+ .|... .....|.||++.++
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEE
Confidence 444579999999999999999 66677777776310 00 0000 01111 11245899999999
Q ss_pred EEEecCceeeeEEeccchhhhccCccccEEEcc
Q 007635 117 QFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINN 149 (595)
Q Consensus 117 ~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 149 (595)
.|++ +.+|+|||||+...|...||.|.|+|.+
T Consensus 109 ~~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 109 TFRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9998 5799999999998888899999999964
No 79
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.86 E-value=5.6e-09 Score=92.77 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=56.9
Q ss_pred CCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCC-CCCccCCCCeEEEEEEecCceeeeEEeccc
Q 007635 55 NGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSL 133 (595)
Q Consensus 55 Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~ 133 (595)
+..|=.+.|++++||+|++ .|..+.++++++... .+|... ....+.||++++|.| +++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4455568999999999865 588766777766432 122222 334689999999988 469999999975
Q ss_pred hhhhccCccccEEEc
Q 007635 134 NLQRVSGGFGPVIIN 148 (595)
Q Consensus 134 ~~q~~~Gl~G~liV~ 148 (595)
|. ||.|.|+|+
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 33 999999985
No 80
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.82 E-value=7.9e-09 Score=87.18 Aligned_cols=79 Identities=14% Similarity=0.181 Sum_probs=64.5
Q ss_pred CCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccch
Q 007635 55 NGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN 134 (595)
Q Consensus 55 Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~ 134 (595)
|..|-...|++++||+|++.++|....++++...+... ...+.||++.+|.|+. +++|+|.|+|.
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t~-~~~G~Y~y~C~-- 86 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVKP-KSAGTYELICR-- 86 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEECC-CSCEEEEEECT--
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEec-ccCceEEEECc--
Confidence 55665579999999999999999976776666655422 1347899999999997 68999999996
Q ss_pred hhhccCccccEEEc
Q 007635 135 LQRVSGGFGPVIIN 148 (595)
Q Consensus 135 ~q~~~Gl~G~liV~ 148 (595)
.|...||.|.|+|+
T Consensus 87 ~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 87 YHLLKGMEGKVIVK 100 (100)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred cccCCCCEEEEEEC
Confidence 46778999999996
No 81
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.81 E-value=5.6e-08 Score=107.03 Aligned_cols=240 Identities=14% Similarity=0.078 Sum_probs=144.1
Q ss_pred ceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCcccee-eeccCccccceeecEEEEcC
Q 007635 193 DGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLL-VETEGHYTSQQNYTSFEIHV 271 (595)
Q Consensus 193 d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~i~p 271 (595)
..+++||+.. .|.|+++.|+++++++.|........+|.||....- -..||.+- +..-.|.|
T Consensus 87 ~~~~~NG~~P-------------GP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~----vTq~pI~P 149 (580)
T 3sqr_A 87 SAMTFNGTVP-------------GPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPG----VTQCPIAP 149 (580)
T ss_dssp EEEEETTBSS-------------CCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccC-------------CceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCc----cccCCCCC
Confidence 3788999864 499999999999999999877445677777765432 46799753 22335899
Q ss_pred CcEEEEEEEcCCCCCcceEEEEeeecccccccccceeEEEEEecCCCCCCCCCCCCCC-CCCCccccccCccccccccCC
Q 007635 272 GQSYSFLVTMDQNASSDYYIVASARFVNESFWQRVTGVAILHYSNSKGAASGPLPEAP-SDIYNQWAAMTQPRSIRQNTS 350 (595)
Q Consensus 272 G~R~dvlv~~~~~~g~~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~~-p~~~~~~~~~~~~~~~~~~l~ 350 (595)
|+++...++++| +| .||.+.+... +. ...+.+ +++.+... +.+..... + +--.+|.......+...+.
T Consensus 150 G~sftY~f~~~q-~G-T~WYHsH~~~--q~-~~GL~G-~lIV~~p~----~~~yD~d~~~-l~l~Dw~~~~~~~~~~~~~ 218 (580)
T 3sqr_A 150 GDTLTYKFQVTQ-YG-TTWYHSHFSL--QY-GDGLFG-PLIINGPA----TADYDEDVGV-IFLQDWAHESVFEIWDTAR 218 (580)
T ss_dssp TCEEEEEEECCC-CE-EEEEEECSTT--GG-GGTCEE-EEEEECCC----SSCCSEEEEE-EEEEEECSSCHHHHHHHHT
T ss_pred CCeEEEEEECCC-Cc-ceEEeecccc--cc-cCcCEE-EEEeeCcc----cCCCCccceE-EEEEEEecCCHHHHHHHHh
Confidence 999999999984 68 9999998731 11 011333 23333211 00000000 0 0001121111000000000
Q ss_pred CCCCCCCCCCCCCcCccceeeEEEEecCCCcccCCeEEEEecCeeccCCCChhhhhhcccCCCcccCCCCCCCCCCCCCC
Q 007635 351 ASGARPNPQGSFHYGSINITDTYVLRSLPPVTIDGKVRSTLNGISFVKPETPIRLADKYNVKGAYKLDFPNKPLTRPPRT 430 (595)
Q Consensus 351 ~~~~~p~p~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~~~iNg~s~~~p~~P~l~~~~~~~~g~~~~~~~~~p~~~~~~~ 430 (595)
.. .........|||+....-. + . ...-+ .+ ..
T Consensus 219 ~~-----------------------------~~~~~d~~liNG~~~~~c~-~---~-----~~~~~-----~~-----~~ 250 (580)
T 3sqr_A 219 LG-----------------------------APPALENTLMNGTNTFDCS-A---S-----TDPNC-----VG-----GG 250 (580)
T ss_dssp TS-----------------------------CCCCBSEEEETTBCCCCCT-T---C-----CCTTB-----CC-----CC
T ss_pred cc-----------------------------CCCCCceEEECCcccCCCc-c---c-----ccccc-----cc-----CC
Confidence 00 0000113567887432100 0 0 00000 00 01
Q ss_pred ceeeeeecCCcEEEEEEecCCCC-ceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCC
Q 007635 431 DRSLINATYKGFIEIILQNNDTK-MQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDN 509 (595)
Q Consensus 431 ~~~v~~~~~g~~ve~vl~N~~~~-~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adN 509 (595)
....+.++.|+++.|.|.|.+.. .+.||++||.|.||+.++. + ..|...|++.+.+|+...|.++++.
T Consensus 251 ~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~-~----------v~P~~~~~l~i~pGqRydVlv~a~~ 319 (580)
T 3sqr_A 251 KKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV-P----------IVPYTTDTLLIGIGQRYDVIVEANA 319 (580)
T ss_dssp CCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE-E----------EEEEEESSEEECTTCEEEEEEECCS
T ss_pred CceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc-c----------CCceEeeEEEEccceEEEEEEEeCC
Confidence 23568889999999999999854 5899999999999999733 2 2377889999999999999999975
Q ss_pred -ceeeeeeecc
Q 007635 510 -VGVWNLRVEN 519 (595)
Q Consensus 510 -pG~W~~HCHi 519 (595)
+|.|-++-..
T Consensus 320 ~~g~Y~i~a~~ 330 (580)
T 3sqr_A 320 AADNYWIRGNW 330 (580)
T ss_dssp CSSEEEEECCC
T ss_pred CCCeEEEEEec
Confidence 5788777554
No 82
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.78 E-value=4.5e-09 Score=88.24 Aligned_cols=77 Identities=12% Similarity=0.210 Sum_probs=59.4
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCC-----CCCCccCCCCeEEEEEEecCceeeeEEeccch
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ-----GTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLN 134 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~ 134 (595)
.+.|++++||+|+ ++|....++++|+|+.... +|.. .....+.||+++++.|. ++|+|+||||
T Consensus 17 P~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~-- 84 (98)
T 2plt_A 17 PKTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE-- 84 (98)
T ss_dssp SSEEEECTTCEEE--EEECSSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--
Confidence 4789999999875 5888777899999986321 2211 11245899999999884 6999999999
Q ss_pred hhhccCccccEEEc
Q 007635 135 LQRVSGGFGPVIIN 148 (595)
Q Consensus 135 ~q~~~Gl~G~liV~ 148 (595)
.|...||.|.|+|+
T Consensus 85 ~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 85 PHQGAGMVGKIIVQ 98 (98)
T ss_dssp GGGGGTCEEEEEEC
T ss_pred CccccCCeEEEEEC
Confidence 67778999999984
No 83
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.74 E-value=4.6e-09 Score=88.22 Aligned_cols=81 Identities=11% Similarity=0.181 Sum_probs=58.2
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccchhhhcc
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVS 139 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~ 139 (595)
.+.|++++||+|++ .|....++++|.++...++. ..++.......+.||+++++.| +++|+|+|||+ .|...
T Consensus 18 P~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~ 89 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGA 89 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--Ccccc
Confidence 47899999998765 58766788888887532100 0000001134589999999988 47999999999 67778
Q ss_pred CccccEEEc
Q 007635 140 GGFGPVIIN 148 (595)
Q Consensus 140 Gl~G~liV~ 148 (595)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 1pcs_A 90 GMVGKVVVE 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999985
No 84
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.73 E-value=1.8e-08 Score=83.13 Aligned_cols=76 Identities=12% Similarity=0.244 Sum_probs=57.5
Q ss_pred CCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccchhhh
Q 007635 58 FPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQR 137 (595)
Q Consensus 58 ~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~ 137 (595)
|-.+.|++++||+|++ .|..+.++++|.++.. ++. .....+.||+++++.| +++|+|||||+ .|.
T Consensus 16 f~P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~----~~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~ 80 (91)
T 1bxv_A 16 FEPSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS----HKDLAFSPGETFEATF---SEPGTYTYYCE--PHR 80 (91)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC----EEEEECSTTCEEEEEC---CSCEEEEEECT--TTG
T ss_pred EeCCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC----cccceeCCCCEEEEEe---CCCEEEEEEeC--CCc
Confidence 3457999999999765 5876678888888731 110 1224589999999887 47999999999 566
Q ss_pred ccCccccEEEc
Q 007635 138 VSGGFGPVIIN 148 (595)
Q Consensus 138 ~~Gl~G~liV~ 148 (595)
..||.|.|+|+
T Consensus 81 ~~gM~g~i~V~ 91 (91)
T 1bxv_A 81 GAGMVGKIVVQ 91 (91)
T ss_dssp GGTCEEEEEEC
T ss_pred cCCCEEEEEEC
Confidence 67999999984
No 85
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.66 E-value=5.7e-08 Score=84.88 Aligned_cols=76 Identities=14% Similarity=0.124 Sum_probs=54.5
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccchhhhcc
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVS 139 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~ 139 (595)
...|+|++||+|++.++|. + |++......+-+|.. ...+.||++++|.| +++|+|||||. .|...
T Consensus 20 P~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~P~g~~--~f~~~pg~t~s~TF---~~pG~y~y~C~--~H~~~ 84 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK---S-----HNVEAIKEILPEGVE--SFKSKINESYTLTV---TEPGLYGVKCT--PHFGM 84 (123)
T ss_dssp SSEEEECTTEEEEEEESST---T-----CCCEECTTSSCTTCC--CCBCCTTCCEEEEE---CSCEEEEEECG--GGTTT
T ss_pred CCEEEECCCCEEEEEECCC---C-----ceEEEcCCcCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeC--CCCcC
Confidence 3699999999988777762 3 444322111223321 23467999999988 47999999998 67788
Q ss_pred CccccEEEccC
Q 007635 140 GGFGPVIINNR 150 (595)
Q Consensus 140 Gl~G~liV~~~ 150 (595)
||.|.|+|.+.
T Consensus 85 GM~G~I~V~~~ 95 (123)
T 3erx_A 85 GMVGLVQVGDA 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CcEEEEEECCC
Confidence 99999999973
No 86
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.66 E-value=4.6e-08 Score=82.65 Aligned_cols=79 Identities=3% Similarity=0.048 Sum_probs=56.5
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCC--------CCCCCCCCCccCCCCeEEEEEEecCceeeeEEec
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSW--------QDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFP 131 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~--------~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~ 131 (595)
.+.|++++||+|+ +.|....+++++.+.- .... +.+.......+.||+++++.| +++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGETGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSSSCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCCCCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEe
Confidence 4789999999976 5688666777777621 0000 001111224589999999988 4799999999
Q ss_pred cchhhhccCccccEEEc
Q 007635 132 SLNLQRVSGGFGPVIIN 148 (595)
Q Consensus 132 H~~~q~~~Gl~G~liV~ 148 (595)
+ .|...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 77888999999985
No 87
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.63 E-value=6.2e-08 Score=81.03 Aligned_cols=77 Identities=9% Similarity=0.207 Sum_probs=56.9
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCC---CCCCccCCCCeEEEEEEecCceeeeEEeccchhh
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ---GTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQ 136 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~---~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q 136 (595)
.+.|++++||+| ++.|....+++++.++... .+|.. .....+.||+++++.| +++|+|+|||+ .|
T Consensus 18 P~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H 85 (97)
T 1b3i_A 18 PKALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PH 85 (97)
T ss_dssp SSEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--ST
T ss_pred CCEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Ch
Confidence 368999999986 5568765677777776532 11211 1124589999999988 47999999999 67
Q ss_pred hccCccccEEEc
Q 007635 137 RVSGGFGPVIIN 148 (595)
Q Consensus 137 ~~~Gl~G~liV~ 148 (595)
...||.|.|+|+
T Consensus 86 ~~~gM~G~i~V~ 97 (97)
T 1b3i_A 86 RGAGMVGTITVE 97 (97)
T ss_dssp TTTTCEEEEEEC
T ss_pred hhcCCEEEEEEC
Confidence 778999999984
No 88
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.60 E-value=6.6e-08 Score=84.89 Aligned_cols=77 Identities=12% Similarity=0.198 Sum_probs=54.0
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccchhhhcc
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVS 139 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~ 139 (595)
.+.|++++||+|++.++|. + |++......+-||. ....+.||++++|.| +.+|+|||||. .|...
T Consensus 22 P~~i~V~~GDtVtf~n~~~---~-----H~v~~~~~~~P~g~--~~f~s~pGet~s~TF---~~pG~y~y~C~--~H~~~ 86 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK---G-----HNSALMKGGAPEGA--ETWKGKINEEITVTL---SKPGVYMYQCA--PHVGM 86 (127)
T ss_dssp SSEEEECTTCEEEEECSSS---S-----CCCEECTTCSCTTC--CCCBCCTTCCCEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEEEECCC---C-----ceEEEccCcCCCCc--cceecCCCCEEEEEe---CCCeEEEEEeC--CCCcC
Confidence 4799999999977665553 3 44432211111222 123457999998888 47999999998 56778
Q ss_pred CccccEEEccCC
Q 007635 140 GGFGPVIINNRK 151 (595)
Q Consensus 140 Gl~G~liV~~~~ 151 (595)
||.|.|+|.+++
T Consensus 87 GM~G~I~V~~~~ 98 (127)
T 3tu6_A 87 GMIGAIVVGEPA 98 (127)
T ss_dssp TCEEEEEESSCT
T ss_pred CcEEEEEECcCC
Confidence 999999999854
No 89
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.60 E-value=5.6e-08 Score=82.72 Aligned_cols=85 Identities=13% Similarity=0.097 Sum_probs=62.6
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEe-CCce
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSL-DNVG 511 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~a-dNpG 511 (595)
..+.++.|+.|.|+ |.+...|.+|+|+..+.. ..|... .....|++.+.||....+.|.+ +.||
T Consensus 20 ~~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~---~~g~~~----------~~~~~~~~~~~pG~~~~~~f~~~~~~G 84 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA---KSADLA----------KSLSHKQLLMSPGQSTSTTFPADAPAG 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSSSCCCBEECSSSSTT---CCHHHH----------HHHCBCSCCCSTTCEEEEECCTTCCSE
T ss_pred CEEEECCCCEEEEE--ECCCCCceEEEeCCCCcc---cccccc----------hhccccceeeCCCCEEEEEEecCCCCc
Confidence 34678999999886 777788999999754311 001000 0012467778899998898888 8999
Q ss_pred eeeeeeccccceeccceeEEEEe
Q 007635 512 VWNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 512 ~W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
.|.|||| .|..+||...+.|.
T Consensus 85 ~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 85 EYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEEECT--TTGGGTCEEEEEEC
T ss_pred eEEEEeC--ChhhcCcEEEEEEc
Confidence 9999999 49999999999885
No 90
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.59 E-value=1.6e-07 Score=78.73 Aligned_cols=77 Identities=13% Similarity=0.204 Sum_probs=57.9
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCC-------CCCCccCCCCeEEEEEEecCceeeeEEecc
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ-------GTNCPIPSQWNWTYQFQVKDQIGSFFYFPS 132 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H 132 (595)
.+.|++++||+| +++|....++++|.++... .+|.. .....+.||+++++.|. ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG
T ss_pred CCEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC
Confidence 368999999985 5588876788888876422 12221 11235799999999884 6999999999
Q ss_pred chhhhccCccccEEEc
Q 007635 133 LNLQRVSGGFGPVIIN 148 (595)
Q Consensus 133 ~~~q~~~Gl~G~liV~ 148 (595)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 --PHAGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CccccCCEEEEEEC
Confidence 67778999999984
No 91
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.58 E-value=1.7e-07 Score=78.68 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=57.0
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCC-------CCCCccCCCCeEEEEEEecCceeeeEEecc
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ-------GTNCPIPSQWNWTYQFQVKDQIGSFFYFPS 132 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-------~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H 132 (595)
.+.|++++||+|+ ++|....+++++.++... -+|.. .....+.||+++++.|. ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC
Confidence 4799999999765 588866677777775421 12211 11235799999998884 6999999999
Q ss_pred chhhhccCccccEEEc
Q 007635 133 LNLQRVSGGFGPVIIN 148 (595)
Q Consensus 133 ~~~q~~~Gl~G~liV~ 148 (595)
.|...||.|.|+|+
T Consensus 86 --~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 --PHQGAGMVGKVTVN 99 (99)
T ss_dssp --GGTTTTCEEEEEEC
T ss_pred --CCcccCCEEEEEEC
Confidence 67778999999984
No 92
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.57 E-value=1e-07 Score=85.60 Aligned_cols=99 Identities=6% Similarity=0.004 Sum_probs=69.9
Q ss_pred eeeecCCcEEEEEEec--CCCCceeeeecCc--eEEEEeecccccCCCCCCCCCc---CCCCcccEEEECCCcEEEEEEE
Q 007635 434 LINATYKGFIEIILQN--NDTKMQSFHMDGY--SFFVVGMDFGIWTESNRNSYNK---WDAISKCTTEVYPGAWTAILVS 506 (595)
Q Consensus 434 v~~~~~g~~ve~vl~N--~~~~~HP~HlHG~--~F~Vv~~~~G~~~~~~~~~~n~---~~p~~RDTv~v~p~g~~~Irf~ 506 (595)
.++++.|+.|.|++.| .+...|.||++.. +|.-+.. .|.+.... ..+-. ....+++|..|.||....+.|.
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVN-TAAQNNAD-ALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHH-HHHHTCGG-GTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhh-hhhhhccc-ccccCccccccccccceeeCCCceeEEEEE
Confidence 4678999999999999 6678899999842 2211000 00000000 00000 0135678999999999999999
Q ss_pred eCCceeeeeeeccccceeccceeEEEEe
Q 007635 507 LDNVGVWNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 507 adNpG~W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
++.||.|.|||++..|...||...++|.
T Consensus 112 ~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 112 TPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999889999999998885
No 93
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.55 E-value=1.3e-07 Score=82.52 Aligned_cols=76 Identities=9% Similarity=0.026 Sum_probs=54.2
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccchhhhcc
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVS 139 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~ 139 (595)
...|+|++||+|+. .|.- .++++..+.. .+-+|. ....+.||++|+|.| +.+|+|+|||. .|...
T Consensus 21 P~~i~V~~GDTV~f--~n~~-~~Hnv~~~~~-----~~p~g~--~~~~~~pg~t~s~TF---~~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 21 PGFVKVEAGDTVKF--VPTD-KSHNAESVRE-----VWPEGV--APVKGGFSKEVVFNA---EKEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SSEEEECTTCEEEE--ECSS-SSCCCEECTT-----TSCTTS--CCCBCCTTCCEEEEC---CSSEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECC-CCccEEEeCC-----cCCCCc--cccccCCCCEEEEEe---CCCeEEEEEcC--CCCcC
Confidence 37999999999754 4553 4555555421 111222 224467999999988 46899999995 67788
Q ss_pred CccccEEEccC
Q 007635 140 GGFGPVIINNR 150 (595)
Q Consensus 140 Gl~G~liV~~~ 150 (595)
||.|.|+|.++
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999874
No 94
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=98.53 E-value=1e-06 Score=98.53 Aligned_cols=92 Identities=7% Similarity=0.002 Sum_probs=73.1
Q ss_pred ceEEEccCCCCCCCCccCCCCCcceEEEecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccc-------------
Q 007635 193 DGVLINGKGPYRYNTTLVPDGIEYETINVDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYT------------- 259 (595)
Q Consensus 193 d~~liNG~~~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~------------- 259 (595)
..+.+||+.+. +...+.++.|++++|.|.|.+.. .|.||||||.|+|++.+|...
T Consensus 459 ~~~~~n~~~~~-----------~~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~ 526 (612)
T 3gyr_A 459 KTYRRTARTFN-----------DGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTP 526 (612)
T ss_dssp EEEEEEECSTT-----------SCCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSC
T ss_pred ccccccCccCC-----------CCcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccc
Confidence 45678887752 23668899999999999999876 799999999999998765321
Q ss_pred --------------cceeecEEEEcCCcEEEEEEEcCCCCCcceEEEEeeec
Q 007635 260 --------------SQQNYTSFEIHVGQSYSFLVTMDQNASSDYYIVASARF 297 (595)
Q Consensus 260 --------------~p~~~~~l~i~pG~R~dvlv~~~~~~g~~y~i~~~~~~ 297 (595)
++...|++.+.+|+.+.|.+++.+.+| .|-++++...
T Consensus 527 ~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG-~w~~HCHil~ 577 (612)
T 3gyr_A 527 VRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYG-RFMYHCHLLE 577 (612)
T ss_dssp EEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCE-EEEEEESSHH
T ss_pred cccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCc-ceEEcCCChH
Confidence 122479999999999999999666788 8888888753
No 95
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.48 E-value=3.7e-07 Score=75.19 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=57.3
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..+.++.|+.|.|+ |.+...|.+|+|+. + +...++..+.||+...+.| +.||.
T Consensus 19 ~~i~v~~Gd~V~~~--n~~~~~H~v~~~~~---------~--------------~~~~~~~~~~~g~~~~~~f--~~~G~ 71 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNKLAPHNVVVEGQ---------P--------------ELSHKDLAFSPGETFEATF--SEPGT 71 (91)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEETTC---------G--------------GGCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCC---------C--------------ccCcccceeCCCCEEEEEe--CCCEE
Confidence 34678999999876 77678899999872 0 1224777889998777765 99999
Q ss_pred eeeeeccccceeccceeEEEEe
Q 007635 513 WNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
|.||||. |...||...+.|.
T Consensus 72 y~~~C~~--H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 72 YTYYCEP--HRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CccCCCEEEEEEC
Confidence 9999995 8888999888773
No 96
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.45 E-value=1.7e-07 Score=78.52 Aligned_cols=80 Identities=11% Similarity=0.020 Sum_probs=59.6
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..+.++.|+.|.|+ |.+...|.+|+|+..+- +.... ....|+..+.||....++| +.||.
T Consensus 19 ~~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~~~~--------------~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--ADTAA--------------KLSHKGLLFAAGESFTSTF--TEPGT 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HHHHH--------------HHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--ccccc--------------cccccccccCCCCEEEEEc--CCCeE
Confidence 34788999999887 77778899999864321 00000 1125788899998877766 89999
Q ss_pred eeeeeccccceeccceeEEEEe
Q 007635 513 WNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
|.||||. |..+||...+.|.
T Consensus 79 y~~~C~~--H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 79 YTYYCEP--HRGAGMVGKVVVE 98 (98)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEcCC--ccccCCeEEEEEC
Confidence 9999995 8888999998873
No 97
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.45 E-value=3e-07 Score=76.94 Aligned_cols=81 Identities=17% Similarity=0.122 Sum_probs=60.1
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..+.++.|+.|+| .|.+...|.+|+|+..+- .| .+. ...++|+..+.||....++| +.||.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p-----~~---------~~~-~~~~~~~~~~~pG~~~~~tf--~~~G~ 78 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAGFPHNIVFDEDAIP-----SG---------VNA-DAISRDDYLNAPGETYSVKL--TAAGE 78 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECGGGSC-----TT---------CCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCC-----Cc---------ccc-ccccccceecCCCCEEEEEe--CCCeE
Confidence 3477899999987 677778999999974210 00 000 01356889999999877755 69999
Q ss_pred eeeeeccccceeccceeEEEEe
Q 007635 513 WNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
|.||||. |..+||...+.|.
T Consensus 79 y~y~C~~--H~~~gM~G~i~V~ 98 (98)
T 2plt_A 79 YGYYCEP--HQGAGMVGKIIVQ 98 (98)
T ss_dssp EEEECGG--GGGGTCEEEEEEC
T ss_pred EEEEcCC--ccccCCeEEEEEC
Confidence 9999995 8888999988873
No 98
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.38 E-value=1.4e-06 Score=74.84 Aligned_cols=73 Identities=12% Similarity=0.272 Sum_probs=57.0
Q ss_pred eeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceee
Q 007635 434 LINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W 513 (595)
.+.++.|+.|.|++.|.+...|-|++... | -+..+.||....+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------~------------------~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------G------------------VQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------T------------------EEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------C------------------ceeEeCCCCEEEEEEECCCCEEE
Confidence 47789999999999999877676665421 1 25678999999999999999999
Q ss_pred eeeeccccceeccceeEEEEe
Q 007635 514 NLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 514 ~~HCHil~h~~~Gm~~~~~V~ 534 (595)
.||||...|.. +|...+.|.
T Consensus 92 ~~~C~~~~~~~-~M~g~i~V~ 111 (112)
T 1iby_A 92 TIWCQLHPKNI-HLPGTLNVV 111 (112)
T ss_dssp EEBCSSSCTTT-BCCEEEEEE
T ss_pred EEECCCCCchH-HCEEEEEEe
Confidence 99999944322 277777775
No 99
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.36 E-value=4.2e-07 Score=76.14 Aligned_cols=79 Identities=9% Similarity=0.029 Sum_probs=55.8
Q ss_pred CCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCC-----CCCCccCCCCeEEEEEEecCceeeeEEecc
Q 007635 58 FPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQ-----GTNCPIPSQWNWTYQFQVKDQIGSFFYFPS 132 (595)
Q Consensus 58 ~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~-----~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H 132 (595)
|=.+.|++++||+|++ .|....++++....-. +-+|.. .....+.||+++++.| +++|+|+|+|.
T Consensus 15 F~P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~ 84 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEF--VNNAGFPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCE 84 (98)
T ss_dssp EESSEEEECTTCEEEE--EECSSCCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECT
T ss_pred EeCCEEEECCCCEEEE--EECCCCCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc---CCCEEEEEEch
Confidence 3347999999999655 5876567777655421 112321 0113589999999988 47999999997
Q ss_pred chhhhccCccccEEEc
Q 007635 133 LNLQRVSGGFGPVIIN 148 (595)
Q Consensus 133 ~~~q~~~Gl~G~liV~ 148 (595)
. |...||.|.|+|+
T Consensus 85 ~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 85 P--HAGAGMKMTITVQ 98 (98)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred h--hccCCCEEEEEEC
Confidence 4 6667999999985
No 100
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.36 E-value=1.1e-06 Score=76.88 Aligned_cols=76 Identities=9% Similarity=0.142 Sum_probs=51.2
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccchhhhcc
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVS 139 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~ 139 (595)
.+.|++++||+|+. .|.-. + |.+.......-||.. .....||++++|.| +.+|+|+|+|. .|...
T Consensus 20 P~~i~V~~GdtV~f--~~~~~-~-----H~v~~~~~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~ 84 (123)
T 1paz_A 20 PAYIKANPGDTVTF--IPVDK-G-----HNVESIKDMIPEGAE--KFKSKINENYVLTV---TQPGAYLVKCT--PHYAM 84 (123)
T ss_dssp SSEEEECTTCEEEE--EESSS-S-----CCCEECTTCSCTTCC--CCBCCTTCCEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCC-C-----eEEEEecccCCCCcc--ceecCCCCEEEEEe---CCCEEEEEEeC--CcccC
Confidence 47999999999754 55532 4 444321111122321 12346999988888 46999999997 47778
Q ss_pred CccccEEEccC
Q 007635 140 GGFGPVIINNR 150 (595)
Q Consensus 140 Gl~G~liV~~~ 150 (595)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1paz_A 85 GMIALIAVGDS 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 101
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.31 E-value=1.2e-06 Score=76.59 Aligned_cols=76 Identities=12% Similarity=0.156 Sum_probs=51.8
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccchhhhcc
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVS 139 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~ 139 (595)
.+.|++++||+|+ +.|.-. + |.+......+-||.. ...+.||++++|.| +.+|+|+|+|. .|...
T Consensus 20 P~~i~V~~GdtV~--f~n~~~-~-----H~v~~~~~~~p~~~~--~~~~~pG~t~~~tF---~~~G~y~y~C~--~H~~~ 84 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPTDK-G-----HNVETIKGMAPDGAD--YVKTTVGQEAVVKF---DKEGVYGFKCA--PHYMM 84 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS-S-----CCCEECTTSSCTTCC--CCBCCTTSCEEEEC---CSCEEEEEECS--TTTTT
T ss_pred CCEEEECCCCEEE--EEECCC-C-----cEEEEecccCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeC--Ccccc
Confidence 4799999999965 555532 4 444322111223321 23457999988888 36999999997 47778
Q ss_pred CccccEEEccC
Q 007635 140 GGFGPVIINNR 150 (595)
Q Consensus 140 Gl~G~liV~~~ 150 (595)
||.|.|+|.++
T Consensus 85 gM~G~I~V~~~ 95 (123)
T 1pmy_A 85 GMVALVVVGDK 95 (123)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEcCC
Confidence 99999999874
No 102
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.27 E-value=2.7e-06 Score=71.42 Aligned_cols=72 Identities=17% Similarity=0.239 Sum_probs=59.4
Q ss_pred eeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceee
Q 007635 434 LINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W 513 (595)
.++++.|+.|.|++.|.+...|.|.+.+..+ ...+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceE
Confidence 4788999999999999988888887754321 2356778888999999999999
Q ss_pred eeeeccccceeccceeEEEEe
Q 007635 514 NLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 514 ~~HCHil~h~~~Gm~~~~~V~ 534 (595)
.|+|.. |...||...+.|+
T Consensus 82 ~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEECcc--ccCCCCEEEEEEC
Confidence 999987 8889998888774
No 103
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.26 E-value=3.7e-07 Score=76.25 Aligned_cols=78 Identities=12% Similarity=0.179 Sum_probs=57.3
Q ss_pred eeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceee
Q 007635 434 LINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W 513 (595)
.++++.|+.|.|+ |.+...|.+++++..+ ..+. .....++..+.||....+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~-----~~~~------------~~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPA-----GESA------------PALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCT-----TSCH------------HHHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCC-----cccc------------ccccccceecCCCCEEEEEe--CCCeEE
Confidence 4678999998876 7777789999986543 0000 01124666788888777765 899999
Q ss_pred eeeeccccceeccceeEEEEe
Q 007635 514 NLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 514 ~~HCHil~h~~~Gm~~~~~V~ 534 (595)
.|||+. |..+||...+.|.
T Consensus 79 ~y~C~~--H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 79 SFYCTP--HRGAGMVGTITVE 97 (97)
T ss_dssp EEECSS--TTTTTCEEEEEEC
T ss_pred EEEccC--hhhcCCEEEEEEC
Confidence 999995 8888999888773
No 104
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.25 E-value=1.6e-06 Score=76.26 Aligned_cols=92 Identities=10% Similarity=-0.005 Sum_probs=61.7
Q ss_pred CCCCceEEecCC-CEEEEEEEeCCCCC-----cee--ecCCCcc-------CCCCC------CCCCCC-CCCccCCCCeE
Q 007635 57 KFPGAVLNATTN-NNIVINVQNDLDES-----LLM--TWPGIQM-------RRNSW------QDGVQG-TNCPIPSQWNW 114 (595)
Q Consensus 57 ~~PGP~i~v~~G-d~v~v~v~N~l~~~-----~si--H~HG~~~-------~~~~~------~DGv~~-tq~~I~PG~~~ 114 (595)
+|=-..|.|++| |+|+|+|+|....+ +.+ -=+|..+ ...+. .|.--. ...-|.||+++
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 444468999999 99999999986543 332 1122100 00000 111111 12348999999
Q ss_pred EEEEEec--CceeeeEEeccchhhhccCccccEEEcc
Q 007635 115 TYQFQVK--DQIGSFFYFPSLNLQRVSGGFGPVIINN 149 (595)
Q Consensus 115 tY~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 149 (595)
++.|+++ .++|+|||.|....|+. ||.|.|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999984 37999999998888887 8999999963
No 105
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.15 E-value=1.3e-06 Score=73.21 Aligned_cols=83 Identities=12% Similarity=0.035 Sum_probs=58.7
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..++++.|+.|.| .|.+...|.+|+++..|- .| ++.. .. ...+|++.+.||....+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~~-----~~--~~~~~~~~~~~G~~~~~~f--~~~G~ 79 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDVT-----KI--SMPEEDLLNAPGEEYSVTL--TEKGT 79 (99)
T ss_dssp SEEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCHH-----HH--SCCTTCCBCSTTCEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-cccc-----cc--cccccceeeCCCCEEEEEe--CCCcE
Confidence 3577899999877 677778899999975430 01 0000 00 1225667788888777765 69999
Q ss_pred eeeeeccccceeccceeEEEEe
Q 007635 513 WNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
|.|||+. |..+||...+.|.
T Consensus 80 y~~~C~~--H~~~gM~G~i~V~ 99 (99)
T 1byp_A 80 YKFYCAP--HAGAGMVGKVTVN 99 (99)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEcCC--ccccCCEEEEEEC
Confidence 9999995 8888999888773
No 106
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.15 E-value=2.6e-06 Score=78.09 Aligned_cols=97 Identities=8% Similarity=0.017 Sum_probs=64.0
Q ss_pred EEECC--CCCCceEEe-cCCCEEEEEEEeCCCCC-----ceee--cCCCc---------cCCCCC---CCCCCC-CCCcc
Q 007635 52 IAING--KFPGAVLNA-TTNNNIVINVQNDLDES-----LLMT--WPGIQ---------MRRNSW---QDGVQG-TNCPI 108 (595)
Q Consensus 52 ~~~Ng--~~PGP~i~v-~~Gd~v~v~v~N~l~~~-----~siH--~HG~~---------~~~~~~---~DGv~~-tq~~I 108 (595)
+..++ +|=-..|.| +.||+|+|+|+|....+ +.+- -+|.. .-...+ .|.--. ...-|
T Consensus 47 I~~~d~m~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l 126 (167)
T 3ay2_A 47 VESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLI 126 (167)
T ss_dssp EEECTTSCBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCB
T ss_pred EEeCCCceEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceee
Confidence 44454 554568999 99999999999996543 2221 12210 000000 111101 12348
Q ss_pred CCCCeEEEEEEec-CceeeeEEeccchhhhccCccccEEEcc
Q 007635 109 PSQWNWTYQFQVK-DQIGSFFYFPSLNLQRVSGGFGPVIINN 149 (595)
Q Consensus 109 ~PG~~~tY~f~~~-~~~Gt~wYH~H~~~q~~~Gl~G~liV~~ 149 (595)
.||+++++.|+++ -++|+|||+|....|+. ||.|-|+|.+
T Consensus 127 ~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 127 GGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp CTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 9999999999984 16999999998888887 8999999963
No 107
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.11 E-value=1.4e-05 Score=67.77 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=53.5
Q ss_pred CCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCC-CCCccCCCCeEEEEEEecCceeeeEEeccc
Q 007635 55 NGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQG-TNCPIPSQWNWTYQFQVKDQIGSFFYFPSL 133 (595)
Q Consensus 55 Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~-tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~ 133 (595)
+..|=.+.|++++||+|++ .|....+++++..... .|... ....+.||+++++.| +++|+|+|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 3455457999999999765 5876555555443321 11111 223578999999888 479999999975
Q ss_pred hhhhccCccccEEEc
Q 007635 134 NLQRVSGGFGPVIIN 148 (595)
Q Consensus 134 ~~q~~~Gl~G~liV~ 148 (595)
|. ||.|.|+|+
T Consensus 96 --H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 --HP--FMRGKVIVE 106 (106)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --CC--CCEEEEEEC
Confidence 33 999999984
No 108
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.06 E-value=2.4e-05 Score=68.76 Aligned_cols=92 Identities=10% Similarity=0.003 Sum_probs=59.9
Q ss_pred CCCCceEEe-cCCCEEEEEEEeCCCCC-----ceeec--CCCcc-------------CCCCCCCCCCC-CCCccCCCCeE
Q 007635 57 KFPGAVLNA-TTNNNIVINVQNDLDES-----LLMTW--PGIQM-------------RRNSWQDGVQG-TNCPIPSQWNW 114 (595)
Q Consensus 57 ~~PGP~i~v-~~Gd~v~v~v~N~l~~~-----~siH~--HG~~~-------------~~~~~~DGv~~-tq~~I~PG~~~ 114 (595)
+|=-..|.| ++||+|+|+|+|....+ +.+-+ +|..+ .--+..|.--. ...-|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 454468999 99999999999996543 33221 22000 00000111101 12348999999
Q ss_pred EEEEEec-Cceee-eEEeccchhhhccCccccEEEcc
Q 007635 115 TYQFQVK-DQIGS-FFYFPSLNLQRVSGGFGPVIINN 149 (595)
Q Consensus 115 tY~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 149 (595)
+..|+++ -++|+ |||.|....|+. ||.|.|+|.+
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 9999984 03654 999998888887 8999999963
No 109
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.01 E-value=2.8e-05 Score=68.17 Aligned_cols=91 Identities=10% Similarity=0.013 Sum_probs=60.0
Q ss_pred CCCCceEEe-cCCCEEEEEEEeCCCCC-----ceeec--CCCcc-------CCCCCCCCCC------C-CCCccCCCCeE
Q 007635 57 KFPGAVLNA-TTNNNIVINVQNDLDES-----LLMTW--PGIQM-------RRNSWQDGVQ------G-TNCPIPSQWNW 114 (595)
Q Consensus 57 ~~PGP~i~v-~~Gd~v~v~v~N~l~~~-----~siH~--HG~~~-------~~~~~~DGv~------~-tq~~I~PG~~~ 114 (595)
+|=...|.| ++||+|+|+++|....+ +.+-. .|..+ .....+|=++ . ....|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 454568999 99999999999986543 43322 11100 0000111111 1 11248999999
Q ss_pred EEEEEecC-ceee-eEEeccchhhhccCccccEEEc
Q 007635 115 TYQFQVKD-QIGS-FFYFPSLNLQRVSGGFGPVIIN 148 (595)
Q Consensus 115 tY~f~~~~-~~Gt-~wYH~H~~~q~~~Gl~G~liV~ 148 (595)
+..|+++. ++|+ |||.|....|+. ||.|.|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999841 4676 999999888887 899999984
No 110
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.00 E-value=6.6e-06 Score=69.17 Aligned_cols=86 Identities=8% Similarity=-0.069 Sum_probs=57.6
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..++++.|+.|.|+ |.+...|.++++.-... .+.+.... ....+..+++.+.||....+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~-----~~~~~~~~~~~~~pG~~~~~tf--~~~G~ 82 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASEL-----KAASMDENDLLSEDEPSFKAKV--STPGT 82 (102)
T ss_dssp SEEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHH-----HHTSCCTTCCBBTTBCEEEECC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchh-----hcccccccceecCCCCEEEEEe--CCCeE
Confidence 45788999999876 77778899998721100 00000000 0001224667788888777766 89999
Q ss_pred eeeeeccccceeccceeEEEEe
Q 007635 513 WNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
|.|||+. |..+||...+.|.
T Consensus 83 y~y~C~~--H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 83 YTFYCTP--HKSANMKGTLTVK 102 (102)
T ss_dssp EEEECST--TGGGTCEEEEEEC
T ss_pred EEEEeCC--CcccCCeEEEEEC
Confidence 9999994 8889999988873
No 111
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.00 E-value=3.1e-05 Score=67.92 Aligned_cols=92 Identities=13% Similarity=0.055 Sum_probs=60.7
Q ss_pred CCCCceEEe-cCCCEEEEEEEeCCCCC-----ceeecC--C---------Ccc----CCCCCCCCCCC-CCCccCCCCeE
Q 007635 57 KFPGAVLNA-TTNNNIVINVQNDLDES-----LLMTWP--G---------IQM----RRNSWQDGVQG-TNCPIPSQWNW 114 (595)
Q Consensus 57 ~~PGP~i~v-~~Gd~v~v~v~N~l~~~-----~siH~H--G---------~~~----~~~~~~DGv~~-tq~~I~PG~~~ 114 (595)
+|=...|.| +.||+|+|+++|....+ +++-+- + +.. .--+..|.--. ...-|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 454568999 99999999999986543 433211 1 100 00000111101 12347999999
Q ss_pred EEEEEec-Cceee-eEEeccchhhhccCccccEEEcc
Q 007635 115 TYQFQVK-DQIGS-FFYFPSLNLQRVSGGFGPVIINN 149 (595)
Q Consensus 115 tY~f~~~-~~~Gt-~wYH~H~~~q~~~Gl~G~liV~~ 149 (595)
++.|+++ -++|+ |+|.|....|+. ||.|.|+|.+
T Consensus 93 ~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 93 SVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp EEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 9999984 15785 999999888887 9999999963
No 112
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.96 E-value=2.6e-05 Score=83.71 Aligned_cols=89 Identities=15% Similarity=0.151 Sum_probs=64.6
Q ss_pred EEEEEECCCCCCceEEecCCCEEEEEEEeCC---CCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCcee
Q 007635 49 QQVIAINGKFPGAVLNATTNNNIVINVQNDL---DESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIG 125 (595)
Q Consensus 49 ~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l---~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~G 125 (595)
..+...+-.|-.+.|++++||+|++.++|.. +..+++...++ | ...-+.||++.++.|++ +++|
T Consensus 546 V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------G---IK~DaiPGrtnsvtFta-dkPG 612 (638)
T 3sbq_A 546 VYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------G---VSMEISPQQTSSITFVA-DKPG 612 (638)
T ss_dssp EEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------T---EEEEECTTCEEEEEEEC-CSCE
T ss_pred EEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------C---ceeeeCCCCeEEEEEEc-CCCE
Confidence 3455566677778999999999999999974 33333332222 1 12358899999999998 6899
Q ss_pred eeEEeccch-hhhccCccccEEEccC
Q 007635 126 SFFYFPSLN-LQRVSGGFGPVIINNR 150 (595)
Q Consensus 126 t~wYH~H~~-~q~~~Gl~G~liV~~~ 150 (595)
+|||||+.- ...-.+|.|.|+|+++
T Consensus 613 vY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 613 LHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEECCCcCCCCcccceEEEEEecC
Confidence 999999842 2222479999999863
No 113
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.94 E-value=1.8e-05 Score=68.85 Aligned_cols=75 Identities=12% Similarity=0.115 Sum_probs=49.6
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccchhhhcc
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSLNLQRVS 139 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~~~q~~~ 139 (595)
.+.|++++||+|++ .|... . |++.......-+|. ....+.||++++|.| +++|+|+|+|.. |..
T Consensus 20 P~~i~V~~GdtV~f--~n~d~-~-----H~v~~~~~~~p~~~--~~~~~~~g~t~~~tF---~~~G~y~y~C~~--H~~- 83 (122)
T 2ux6_A 20 PASLKVAPGDTVTF--IPTDK-G-----HNVETIKGMIPDGA--EAFKSKINENYKVTF---TAPGVYGVKCTP--HPF- 83 (122)
T ss_dssp SSEEEECTTEEEEE--EESSS-S-----CCCEECTTCSCTTC--CCCBCCTTCCEEEEE---CSCEEEEEEETT--EEE-
T ss_pred CCEEEECCCCEEEE--EECCC-C-----cEEEEcccccCCCc--ceeecCCCCEEEEEe---CCCEEEEEEeCC--Ccc-
Confidence 47999999998654 56533 4 44433211112221 123457999999988 468999999975 333
Q ss_pred CccccEEEccCC
Q 007635 140 GGFGPVIINNRK 151 (595)
Q Consensus 140 Gl~G~liV~~~~ 151 (595)
|.|.|+|.+.+
T Consensus 84 -M~G~I~V~~~p 94 (122)
T 2ux6_A 84 -MVGVVQVGDAP 94 (122)
T ss_dssp -EEEEEEESSSC
T ss_pred -CEEEEEEeCCC
Confidence 99999998743
No 114
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.84 E-value=1.6e-05 Score=66.34 Aligned_cols=83 Identities=14% Similarity=0.058 Sum_probs=57.4
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..++++.|+.|.| .|.+...|.++++...+- .|. + ..+. ...++.+.+.||....+.| +.||.
T Consensus 17 ~~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~~-~-----~~~~--~~~~~~~~~~~G~~~~~tf--~~~G~ 79 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SGV-D-----ASKI--SMSEEDLLNAKGETFEVAL--SNKGE 79 (99)
T ss_dssp SEEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TTC-C-----HHHH--CCCTTCCBCSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCCCCc-----ccc-c-----cccc--ccccCccccCCCCEEEEEE--CCCce
Confidence 4578899999877 677778899999864320 000 0 0000 1124556778888777655 79999
Q ss_pred eeeeeccccceeccceeEEEEe
Q 007635 513 WNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
|.|||+. |..+||...+.|.
T Consensus 80 y~~~C~~--H~~~gM~G~i~V~ 99 (99)
T 1plc_A 80 YSFYCSP--HQGAGMVGKVTVN 99 (99)
T ss_dssp EEEECGG--GTTTTCEEEEEEC
T ss_pred EEEEcCC--CcccCCEEEEEEC
Confidence 9999995 8888998888773
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.63 E-value=0.00017 Score=79.00 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=60.8
Q ss_pred eeeeecCCcEEEEEEecCCC---CceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCC
Q 007635 433 SLINATYKGFIEIILQNNDT---KMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDN 509 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~---~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adN 509 (595)
..+.++.|+.|+|++.|.+. ..|.|+++++.+. ..+.||....++|+++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 45778999999999999753 3799998865321 36788899999999999
Q ss_pred ceeeeeeeccc-cceeccceeEEEEeCC
Q 007635 510 VGVWNLRVENL-DRWYLGQETYMKIVNP 536 (595)
Q Consensus 510 pG~W~~HCHil-~h~~~Gm~~~~~V~~~ 536 (595)
||.|.||||.. ...|.||...+.|.++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~ 593 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPK 593 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcC
Confidence 99999999932 1234699999988854
No 116
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.62 E-value=9.3e-05 Score=67.14 Aligned_cols=84 Identities=8% Similarity=0.018 Sum_probs=59.2
Q ss_pred eeeeecCCcEEEEEEecCC-CCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEE-------EECCCc--EEE
Q 007635 433 SLINATYKGFIEIILQNND-TKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTT-------EVYPGA--WTA 502 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~-~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv-------~v~p~g--~~~ 502 (595)
..++++.|+.|.+++.|.+ ...|-+-++. .+. .+.. -|...+.+ .+.||. ...
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~-------~~~-~~~~---------~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITK-------KGP-PYAV---------MPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEES-------CCS-CCCS---------SCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEee-------cCc-chhc---------cccccccccccccccccCCCCceEEE
Confidence 3578999999999999974 4556655542 111 0100 01111221 567888 889
Q ss_pred EEEEeCCceeeeeeeccccceeccceeEEEEe
Q 007635 503 ILVSLDNVGVWNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 503 Irf~adNpG~W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
++|++ .||.+.||||+-.|...||-..+.|.
T Consensus 124 ~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99999 99999999999889999999888773
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.62 E-value=0.00012 Score=61.83 Aligned_cols=72 Identities=8% Similarity=0.022 Sum_probs=50.0
Q ss_pred eeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceee
Q 007635 434 LINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W 513 (595)
.+.++.|+.|+|+ |.+...|.+|+|+.. .|. +.+ +.-.+.||....+.| +.||.+
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~~H~v~~~~~~-------~g~-------------~~~-~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAMPHNVHFVAGV-------LGE-------------AAL-KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEcCCC-------CCc-------------ccc-cccccCCCCEEEEEe--CCCEEE
Confidence 4778999999885 887788999998521 111 001 111366777655554 899999
Q ss_pred eeeeccccceeccceeEEEEe
Q 007635 514 NLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 514 ~~HCHil~h~~~Gm~~~~~V~ 534 (595)
.|||++ |. ||...+.|.
T Consensus 89 ~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--CC--CCEEEEEEC
Confidence 999998 54 888888763
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.27 E-value=0.0012 Score=57.09 Aligned_cols=88 Identities=11% Similarity=0.149 Sum_probs=56.3
Q ss_pred CCCCceEEecC-CCEEEEEEEeCCCCC-----ce--e---------ecCCCccC-CCCC---CCCCCC-CCCccCCCCeE
Q 007635 57 KFPGAVLNATT-NNNIVINVQNDLDES-----LL--M---------TWPGIQMR-RNSW---QDGVQG-TNCPIPSQWNW 114 (595)
Q Consensus 57 ~~PGP~i~v~~-Gd~v~v~v~N~l~~~-----~s--i---------H~HG~~~~-~~~~---~DGv~~-tq~~I~PG~~~ 114 (595)
+|=-..|.|+. |++|+|+|+|....+ +. | +--|+..- ...+ .|---. ...-|.||+++
T Consensus 14 ~F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 14 QFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp CBSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 45567999986 999999999997542 22 1 11122110 0011 111111 11238999999
Q ss_pred EEEEEec--CceeeeEEeccchhhhccCccccEEEc
Q 007635 115 TYQFQVK--DQIGSFFYFPSLNLQRVSGGFGPVIIN 148 (595)
Q Consensus 115 tY~f~~~--~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 148 (595)
+..|+.+ .++|+|.|.|. .|+ ||.|.|+|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999986 26899999998 666 999999984
No 119
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.02 E-value=0.0014 Score=54.35 Aligned_cols=81 Identities=20% Similarity=0.126 Sum_probs=54.9
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..++++.|+.|.|+ |.+...|-+.++.. .+. + .++. ..+..+...+.||....+.| +.||.
T Consensus 18 ~~i~v~~GdtV~~~--n~~~~~H~v~~~~~----------~~p-~---g~~~-~~~~~~~~~~~~g~~~~~tf--~~~G~ 78 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAGFPHNIVFDED----------AVP-A---GVDA-DAISYDDYLNSKGETVVRKL--STPGV 78 (98)
T ss_dssp SEEEECTTCEEEEE--ECSSCCEEEEECTT----------SSC-T---TCCH-HHHCEEEEECSTTCEEEEEC--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCCEEEEEeCC----------CCc-c---cccc-ccccccccccCCCCEEEEEc--CCCEE
Confidence 45788999998886 66667888776531 110 0 0000 01123446788888777665 89999
Q ss_pred eeeeeccccceeccceeEEEEe
Q 007635 513 WNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
+.|+|-+ |..+||-..+.|.
T Consensus 79 y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 79 YGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEchh--hccCCCEEEEEEC
Confidence 9999998 8878998888773
No 120
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.91 E-value=0.0011 Score=57.90 Aligned_cols=75 Identities=12% Similarity=0.031 Sum_probs=49.7
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..++++.|++|.|++.|. .|.+..+.. .+ ++.. ..+.+.||.... +.++.||.
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s--~TF~~pG~ 75 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEIT--VTLSKPGV 75 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCE--EECCSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEE--EEeCCCeE
Confidence 357789999999988763 455554321 11 1100 011224566544 45599999
Q ss_pred eeeeeccccceeccceeEEEEeCC
Q 007635 513 WNLRVENLDRWYLGQETYMKIVNP 536 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~~~ 536 (595)
|.|||-. |..+||-..+.|.++
T Consensus 76 y~y~C~~--H~~~GM~G~I~V~~~ 97 (127)
T 3tu6_A 76 YMYQCAP--HVGMGMIGAIVVGEP 97 (127)
T ss_dssp EEEECTT--TGGGTCEEEEEESSC
T ss_pred EEEEeCC--CCcCCcEEEEEECcC
Confidence 9999996 899999999999865
No 121
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=96.89 E-value=0.0014 Score=56.78 Aligned_cols=75 Identities=8% Similarity=0.184 Sum_probs=50.6
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..++++.|++|+|+..+ ..|.+..+. +.+. + -.+.+.+.+|....+. ++.||.
T Consensus 22 ~~i~V~~GDTV~f~n~~---~~Hnv~~~~----------~~~p-~-----------g~~~~~~~pg~t~s~T--F~~~G~ 74 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD---KSHNAESVR----------EVWP-E-----------GVAPVKGGFSKEVVFN--AEKEGL 74 (124)
T ss_dssp SEEEECTTCEEEEECSS---SSCCCEECT----------TTSC-T-----------TSCCCBCCTTCCEEEE--CCSSEE
T ss_pred CEEEECCCCEEEEEECC---CCccEEEeC----------CcCC-C-----------CccccccCCCCEEEEE--eCCCeE
Confidence 34778999999998554 567766652 1111 0 0011223466655544 499999
Q ss_pred eeeeeccccceeccceeEEEEeCC
Q 007635 513 WNLRVENLDRWYLGQETYMKIVNP 536 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~~~ 536 (595)
|.|||-. |..+||-..+.|.+|
T Consensus 75 y~Y~C~~--H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 75 YVLKCAP--HYGMGMVVLVQVGKP 96 (124)
T ss_dssp EEEECTT--TGGGTCEEEEEESSC
T ss_pred EEEEcCC--CCcCCCEEEEEECCC
Confidence 9999986 999999999988865
No 122
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.75 E-value=0.0054 Score=54.03 Aligned_cols=73 Identities=12% Similarity=0.215 Sum_probs=52.9
Q ss_pred ceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccc---hhhh
Q 007635 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL---NLQR 137 (595)
Q Consensus 61 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~---~~q~ 137 (595)
..|.++.|++|++.++|. +.. |+..... .| -+.-+.||+.-++.|++ +++|+|+|+|.. ..|
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~-----Hsf~ip~----~~---~k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H- 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVI-----HGFHVEG----TN---INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH- 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSC-----EEEEETT----SS---CEEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS-
T ss_pred CEEEEcCCCEEEEEEEeC-Ccc-----ceEEecC----CC---ceeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc-
Confidence 489999999999999997 333 3332221 11 12346899988999998 689999999963 233
Q ss_pred ccCccccEEEcc
Q 007635 138 VSGGFGPVIINN 149 (595)
Q Consensus 138 ~~Gl~G~liV~~ 149 (595)
.+|.|.++|.+
T Consensus 125 -~~M~g~v~V~~ 135 (135)
T 2cua_A 125 -QNMFGTIVVKE 135 (135)
T ss_dssp -TTCEEEEEEEC
T ss_pred -CCCEEEEEEEC
Confidence 48999998863
No 123
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.70 E-value=0.0036 Score=54.20 Aligned_cols=74 Identities=8% Similarity=0.135 Sum_probs=49.9
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..++++.|++|.|++.|. .|.+..+. +.+ ++.. +.+.+.|+....+.| +.||.
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~ 73 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIK----------EIL-PEGV-----------ESFKSKINESYTLTV--TEPGL 73 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECT----------TSS-CTTC-----------CCCBCCTTCCEEEEE--CSCEE
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcC----------CcC-CCCc-----------cceecCCCCEEEEEe--CCCeE
Confidence 347889999999998873 35555442 111 0100 011234666555555 89999
Q ss_pred eeeeeccccceeccceeEEEEeC
Q 007635 513 WNLRVENLDRWYLGQETYMKIVN 535 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~~ 535 (595)
|.|+|-. |..+||-..+.|.+
T Consensus 74 y~y~C~~--H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 74 YGVKCTP--HFGMGMVGLVQVGD 94 (123)
T ss_dssp EEEECGG--GTTTTCEEEEEESS
T ss_pred EEEEeCC--CCcCCcEEEEEECC
Confidence 9999996 99999999999986
No 124
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.59 E-value=0.004 Score=52.40 Aligned_cols=72 Identities=7% Similarity=-0.058 Sum_probs=49.0
Q ss_pred eeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceee
Q 007635 434 LINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W 513 (595)
.+.++.|+.|.|+ |.+...|.+++.... .|. ..+ ++-.+.+|....+.| +.||.+
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~-------~~~-------------~~~-~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE-------------DAF-RGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCC-------CCc-------------ccc-cccccCCCCEEEEEe--CCCEEE
Confidence 4778999999887 777777877765321 010 001 222456777666655 899999
Q ss_pred eeeeccccceeccceeEEEEe
Q 007635 514 NLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 514 ~~HCHil~h~~~Gm~~~~~V~ 534 (595)
.|+|-+ |. ||...+.|.
T Consensus 90 ~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--CC--CCEEEEEEC
Confidence 999988 54 888888773
No 125
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.48 E-value=0.01 Score=54.15 Aligned_cols=83 Identities=12% Similarity=0.130 Sum_probs=58.9
Q ss_pred EECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEecc
Q 007635 53 AINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPS 132 (595)
Q Consensus 53 ~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H 132 (595)
..+-+|-...|.++.|++|++.++|. +.-++...-++. -+.-+.||+..+..|++ +++|+|++.|.
T Consensus 85 a~~~~f~Pn~l~VP~G~~Vr~~vTS~-DViHsf~IP~lg------------ik~da~PG~~n~~~~~~-~kpG~y~g~Cs 150 (168)
T 3s8f_B 85 AFAFGYQPNPIEVPQGAEIVFKITSP-DVIHGFHVEGTN------------INVEVLPGEVSTVRYTF-KRPGEYRIICN 150 (168)
T ss_dssp EETTEEESSSEEEETTSEEEEEEECS-SSCEEEEETTSS------------CEEEECTTBCEEEEEEC-CSCEEEEEECC
T ss_pred EEeceEecCEEEEeCCCeEEEEEecC-CceEEEEECCCC------------eEEEecCCceeEEEEEe-CCCEEEEEECC
Confidence 33444444689999999999999997 444333322221 12346799999999998 68999999998
Q ss_pred c-hhhhccCccccEEEcc
Q 007635 133 L-NLQRVSGGFGPVIINN 149 (595)
Q Consensus 133 ~-~~q~~~Gl~G~liV~~ 149 (595)
. -+..-.+|.|-++|++
T Consensus 151 e~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 151 QYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp SCCSTTGGGCEEEEEEEC
T ss_pred cCCCCCcCCCEEEEEEeC
Confidence 3 3444468999999863
No 126
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.34 E-value=0.0065 Score=53.31 Aligned_cols=73 Identities=7% Similarity=-0.056 Sum_probs=50.2
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..++++.|+.|+|+ |.+...|.+++.... .|. ..+ ++-.+.||....+.| +.||.
T Consensus 60 ~~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~-------------~~~-~s~~l~pG~t~~~tF--~~~G~ 114 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE-------------DAF-RGEMMTKDQAYAITF--NEAGS 114 (132)
T ss_dssp SEEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------SCE-ECCCBCTTEEEEEEE--CSCEE
T ss_pred CEEEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc-------------ccc-cccccCCCCEEEEEc--CCCEE
Confidence 34778999999886 877778888875321 010 011 222456777666665 89999
Q ss_pred eeeeeccccceeccceeEEEEe
Q 007635 513 WNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
+.|||-+ |. ||...+.|+
T Consensus 115 y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 115 YDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEEECSS--CT--TCEEEEEEC
T ss_pred EEEEeCC--Cc--CCEEEEEEC
Confidence 9999998 54 898888773
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.08 E-value=0.026 Score=60.82 Aligned_cols=75 Identities=12% Similarity=0.084 Sum_probs=59.9
Q ss_pred eeeeecCCcEEEEEEecCC---CCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCC
Q 007635 433 SLINATYKGFIEIILQNND---TKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDN 509 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~---~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adN 509 (595)
..+.++.|+.|+|++.|.+ +..|.|.+.++.. -+.+.||....+.|+++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI---------------------------K~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV---------------------------SMEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE---------------------------EEEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc---------------------------eeeeCCCCeEEEEEEcCC
Confidence 4577999999999999974 5678888765331 125778888999999999
Q ss_pred ceeeeeeeccccc-eeccceeEEEEe
Q 007635 510 VGVWNLRVENLDR-WYLGQETYMKIV 534 (595)
Q Consensus 510 pG~W~~HCHil~h-~~~Gm~~~~~V~ 534 (595)
||.+.+||...-| .|.+|...+.|+
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CEEEEEECCCcCCCCcccceEEEEEe
Confidence 9999999996544 367888888886
No 128
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=95.94 E-value=0.013 Score=50.77 Aligned_cols=73 Identities=7% Similarity=0.098 Sum_probs=47.0
Q ss_pred eeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceee
Q 007635 434 LINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W 513 (595)
.++++.|++|.|+..+. .|.+.++- +.. ++.... +.+.||... .+.++.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~----------~~~-p~~~~~-----------~~~~pG~t~--~~tF~~~G~y 74 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK---GHNVESIK----------DMI-PEGAEK-----------FKSKINENY--VLTVTQPGAY 74 (123)
T ss_dssp EEEECTTCEEEEEESSS---SCCCEECT----------TCS-CTTCCC-----------CBCCTTCCE--EEECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CeEEEEec----------ccC-CCCccc-----------eecCCCCEE--EEEeCCCEEE
Confidence 47789999998876653 35555431 110 010001 112466644 4555899999
Q ss_pred eeeeccccceeccceeEEEEeC
Q 007635 514 NLRVENLDRWYLGQETYMKIVN 535 (595)
Q Consensus 514 ~~HCHil~h~~~Gm~~~~~V~~ 535 (595)
.|+|-. |..+||-..+.|.+
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 75 LVKCTP--HYAMGMIALIAVGD 94 (123)
T ss_dssp EEECTT--TGGGTCEEEEEESS
T ss_pred EEEeCC--cccCCCEEEEEEcC
Confidence 999986 88889999999875
No 129
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.93 E-value=0.038 Score=48.55 Aligned_cols=72 Identities=15% Similarity=0.228 Sum_probs=52.0
Q ss_pred eeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceeee
Q 007635 435 INATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWN 514 (595)
Q Consensus 435 ~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W~ 514 (595)
+.++.|+.|+|++.|.+ ..|.|-+= +. +--+.+.||....+.|.++.||.+.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hsf~ip-------~~--------------------~~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHGFHVE-------GT--------------------NINVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEEEET-------TS--------------------SCEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccceEEec-------CC--------------------CceeEeCCCCcEEEEEEcCCCEEEE
Confidence 67899999999999975 55655431 11 0114567777788999999999999
Q ss_pred eeecccc-ceeccceeEEEEe
Q 007635 515 LRVENLD-RWYLGQETYMKIV 534 (595)
Q Consensus 515 ~HCHil~-h~~~Gm~~~~~V~ 534 (595)
++|...- .-|.+|-..+.|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9996522 2456888888775
No 130
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=95.82 E-value=0.011 Score=51.06 Aligned_cols=74 Identities=12% Similarity=0.222 Sum_probs=46.8
Q ss_pred eeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceee
Q 007635 434 LINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVW 513 (595)
Q Consensus 434 v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W 513 (595)
.++++.|++|.|+..+. .|-+.++. +.+ ++... .+.+.||.... +.++.||.|
T Consensus 22 ~i~V~~GdtV~f~n~~~---~H~v~~~~----------~~~-p~~~~-----------~~~~~pG~t~~--~tF~~~G~y 74 (123)
T 1pmy_A 22 LVRLKPGDSIKFLPTDK---GHNVETIK----------GMA-PDGAD-----------YVKTTVGQEAV--VKFDKEGVY 74 (123)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECT----------TSS-CTTCC-----------CCBCCTTSCEE--EECCSCEEE
T ss_pred EEEECCCCEEEEEECCC---CcEEEEec----------ccC-CCCcc-----------ceecCCCCEEE--EEeCCCeEE
Confidence 46789999988865542 45554431 111 00000 11234666544 455899999
Q ss_pred eeeeccccceeccceeEEEEeCC
Q 007635 514 NLRVENLDRWYLGQETYMKIVNP 536 (595)
Q Consensus 514 ~~HCHil~h~~~Gm~~~~~V~~~ 536 (595)
.|+|-. |..+||-..+.|.++
T Consensus 75 ~y~C~~--H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 75 GFKCAP--HYMMGMVALVVVGDK 95 (123)
T ss_dssp EEECST--TTTTTCEEEEEESSC
T ss_pred EEEeCC--ccccCCEEEEEEcCC
Confidence 999986 888899999998753
No 131
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.78 E-value=0.014 Score=50.84 Aligned_cols=78 Identities=18% Similarity=0.228 Sum_probs=50.7
Q ss_pred ceEEEe-cCCCEEEEEEEEcCCCc----eEEEEEeCcc-ceeee-------ccCcccccee----ecEEEEcCCcEEEEE
Q 007635 216 YETINV-DPGKTYRVRVHNVGTST----SLNFRIQNHN-LLLVE-------TEGHYTSQQN----YTSFEIHVGQSYSFL 278 (595)
Q Consensus 216 ~~~~~v-~~G~~~rlRliN~~~~~----~~~~~i~gh~-~~vi~-------~DG~~~~p~~----~~~l~i~pG~R~dvl 278 (595)
+..|+| ++|++++|.+.|.+... .|+|.|.... +.-++ .|-.++.+.. ..+-.|+|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 578999 99999999999998753 4666665432 11111 1122332111 123357999999999
Q ss_pred EEcC--CCCCcceEEEEe
Q 007635 279 VTMD--QNASSDYYIVAS 294 (595)
Q Consensus 279 v~~~--~~~g~~y~i~~~ 294 (595)
++++ ++++ +|+....
T Consensus 97 f~~~~l~~G~-~Y~f~C~ 113 (129)
T 2ccw_A 97 FDVSKIAAGE-NYAYFCS 113 (129)
T ss_dssp EEGGGSCTTC-CEEEECC
T ss_pred EeccccCCCc-eEEEEeC
Confidence 9987 5545 7998664
No 132
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.29 E-value=0.031 Score=50.91 Aligned_cols=91 Identities=12% Similarity=0.040 Sum_probs=60.0
Q ss_pred eeee-cCCcEEEEEEecCCCCc-----eeeeecCceEEEEeecccccCCC-------CCCCCCc-CC-CCcccEEEECCC
Q 007635 434 LINA-TYKGFIEIILQNNDTKM-----QSFHMDGYSFFVVGMDFGIWTES-------NRNSYNK-WD-AISKCTTEVYPG 498 (595)
Q Consensus 434 v~~~-~~g~~ve~vl~N~~~~~-----HP~HlHG~~F~Vv~~~~G~~~~~-------~~~~~n~-~~-p~~RDTv~v~p~ 498 (595)
.+++ +.|+.|.|+|.|.+..+ |-|-| ...+. +... ....|-. .+ .....+..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi-------~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVI-------AKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEE-------EEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEe-------ccCcc--hhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 4778 89999999999998653 55443 22210 0000 0000000 00 123345568899
Q ss_pred cEEEEEEEeC--CceeeeeeeccccceeccceeEEEEe
Q 007635 499 AWTAILVSLD--NVGVWNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 499 g~~~Irf~ad--NpG~W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
....|.|.++ .||.+-|+|-+--|+. ||-..+.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999988 8999999999877877 888888875
No 133
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.07 E-value=0.049 Score=46.95 Aligned_cols=72 Identities=7% Similarity=0.124 Sum_probs=45.0
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
..+.++.|+.|.|+.. +. .|-++++. +.+. +....+ .+.+|....+. ++.||.
T Consensus 21 ~~i~V~~GdtV~f~n~--d~-~H~v~~~~----------~~~p-~~~~~~-----------~~~~g~t~~~t--F~~~G~ 73 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPT--DK-GHNVETIK----------GMIP-DGAEAF-----------KSKINENYKVT--FTAPGV 73 (122)
T ss_dssp SEEEECTTEEEEEEES--SS-SCCCEECT----------TCSC-TTCCCC-----------BCCTTCCEEEE--ECSCEE
T ss_pred CEEEECCCCEEEEEEC--CC-CcEEEEcc----------cccC-CCccee-----------ecCCCCEEEEE--eCCCEE
Confidence 3477899999988744 33 56666653 1111 000011 22466655544 489999
Q ss_pred eeeeeccccceeccceeEEEEeC
Q 007635 513 WNLRVENLDRWYLGQETYMKIVN 535 (595)
Q Consensus 513 W~~HCHil~h~~~Gm~~~~~V~~ 535 (595)
|.|+|-+ |.. |-..+.|.+
T Consensus 74 y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 74 YGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEEETT--EEE--EEEEEEESS
T ss_pred EEEEeCC--Ccc--CEEEEEEeC
Confidence 9999988 555 888888875
No 134
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.91 E-value=0.015 Score=50.22 Aligned_cols=79 Identities=18% Similarity=0.254 Sum_probs=51.8
Q ss_pred cceEEEecC-CCEEEEEEEEcCCCc----eEEEEEeCc-cceeeec-------cCccccc----eeecEEEEcCCcEEEE
Q 007635 215 EYETINVDP-GKTYRVRVHNVGTST----SLNFRIQNH-NLLLVET-------EGHYTSQ----QNYTSFEIHVGQSYSF 277 (595)
Q Consensus 215 ~~~~~~v~~-G~~~rlRliN~~~~~----~~~~~i~gh-~~~vi~~-------DG~~~~p----~~~~~l~i~pG~R~dv 277 (595)
+...|+|++ |+++||.|.|.|... .|+|-|... .+.-++. |-.|+++ ....+-.|+|||++++
T Consensus 16 ~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~v 95 (125)
T 3fsa_A 16 NTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSV 95 (125)
T ss_dssp SCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEE
T ss_pred ecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEE
Confidence 357899976 999999999999763 466666421 1111111 3345532 2234556999999999
Q ss_pred EEEcCC--CCCcceEEEEe
Q 007635 278 LVTMDQ--NASSDYYIVAS 294 (595)
Q Consensus 278 lv~~~~--~~g~~y~i~~~ 294 (595)
.++++. .+| +|.....
T Consensus 96 tf~~~~l~~~G-~y~f~C~ 113 (125)
T 3fsa_A 96 TFDVSKLKEGE-QYMFFCA 113 (125)
T ss_dssp EEEGGGC---C-CEEEECS
T ss_pred EEeCcCcCCCc-cEEEEcC
Confidence 999873 567 8988665
No 135
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.86 E-value=0.076 Score=46.18 Aligned_cols=92 Identities=8% Similarity=0.010 Sum_probs=60.7
Q ss_pred eeeeecCC-cEEEEEEecCCCCc-----eeeeecCceEEEEeecccccCCC------CCCCCCcC---C-CCcccEEEEC
Q 007635 433 SLINATYK-GFIEIILQNNDTKM-----QSFHMDGYSFFVVGMDFGIWTES------NRNSYNKW---D-AISKCTTEVY 496 (595)
Q Consensus 433 ~v~~~~~g-~~ve~vl~N~~~~~-----HP~HlHG~~F~Vv~~~~G~~~~~------~~~~~n~~---~-p~~RDTv~v~ 496 (595)
..++++.| +.|.+++.|.+... |-|-| ...+. .... .....++. + .....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi-------~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVL-------AKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEE-------EEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEE-------ecCcc--hhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 45788999 99999999997653 65544 22210 0000 00000110 0 1223455688
Q ss_pred CCcEEEEEEEeC---CceeeeeeeccccceeccceeEEEEe
Q 007635 497 PGAWTAILVSLD---NVGVWNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 497 p~g~~~Irf~ad---NpG~W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
||....+.|.++ .||.+-|.|-+--|+. ||-..+.|.
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 999999999997 9999999998877777 788888875
No 136
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.86 E-value=0.14 Score=46.53 Aligned_cols=72 Identities=14% Similarity=0.209 Sum_probs=56.1
Q ss_pred eeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCceeee
Q 007635 435 INATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGVWN 514 (595)
Q Consensus 435 ~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~W~ 514 (595)
+.++.|+.|++.+.|. +..|.|.+=.. .=-+.+.||....+.|.++.||.+.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~l---------------------------gik~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGT---------------------------NINVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTS---------------------------SCEEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCC---------------------------CeEEEecCCceeEEEEEeCCCEEEE
Confidence 5689999999999997 57787766321 1123556787788999999999999
Q ss_pred eeecc-ccceeccceeEEEEe
Q 007635 515 LRVEN-LDRWYLGQETYMKIV 534 (595)
Q Consensus 515 ~HCHi-l~h~~~Gm~~~~~V~ 534 (595)
+.|.. --+-|.+|-..+.|+
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEE
T ss_pred EECCcCCCCCcCCCEEEEEEe
Confidence 99984 446788999888886
No 137
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=92.91 E-value=0.27 Score=42.57 Aligned_cols=96 Identities=16% Similarity=0.132 Sum_probs=59.8
Q ss_pred eeeee-cCCcEEEEEEecCCCCc-----eeeeecCce-EEEEe---ecccccCCCCCCCCCc-CC-CCcccEEEECCCcE
Q 007635 433 SLINA-TYKGFIEIILQNNDTKM-----QSFHMDGYS-FFVVG---MDFGIWTESNRNSYNK-WD-AISKCTTEVYPGAW 500 (595)
Q Consensus 433 ~v~~~-~~g~~ve~vl~N~~~~~-----HP~HlHG~~-F~Vv~---~~~G~~~~~~~~~~n~-~~-p~~RDTv~v~p~g~ 500 (595)
..+++ +.|+.|.+++.|.+..+ |-|-|=... +.-+. +..|. ...|-. .+ .....|..|.||..
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~-----~~~~~~~~~~~~~~~t~~l~pGes 91 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGL-----NNDYVKAGDERVIAHTSVIGGGET 91 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCG-----GGTTSCTTCTTEEEECCCBCTTCE
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccc-----cccccccccchhhccceeeCCCCE
Confidence 34778 88999999999998664 765442110 00000 00000 000100 01 11234556899999
Q ss_pred EEEEEEeC--Ccee-eeeeeccccceeccceeEEEEe
Q 007635 501 TAILVSLD--NVGV-WNLRVENLDRWYLGQETYMKIV 534 (595)
Q Consensus 501 ~~Irf~ad--NpG~-W~~HCHil~h~~~Gm~~~~~V~ 534 (595)
..+.|.+. .||. +-|.|-+--|+. ||-..+.|.
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999998 8995 999999877877 888888875
No 138
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=92.45 E-value=0.31 Score=42.20 Aligned_cols=96 Identities=6% Similarity=0.002 Sum_probs=58.8
Q ss_pred eeeee-cCCcEEEEEEecCCCCc-----eeeeecCce-EEEEeecccccCCCCCCCCCcCC----CCcccEEEECCCcEE
Q 007635 433 SLINA-TYKGFIEIILQNNDTKM-----QSFHMDGYS-FFVVGMDFGIWTESNRNSYNKWD----AISKCTTEVYPGAWT 501 (595)
Q Consensus 433 ~v~~~-~~g~~ve~vl~N~~~~~-----HP~HlHG~~-F~Vv~~~~G~~~~~~~~~~n~~~----p~~RDTv~v~p~g~~ 501 (595)
..+++ +.|+.|.+++.|.+..+ |-|-+=... +.-+.. .+ ... ...-++.. .....|-.|.||...
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~-~~-m~~--~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIAT-DG-LSA--GIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHH-HH-TTT--CGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHH-HH-hhc--cccccccccccchhheeeeeeCCCCEE
Confidence 44788 89999999999998653 765542110 000000 00 000 00001110 112334468999999
Q ss_pred EEEEEeC--Ccee-eeeeeccccceeccceeEEEE
Q 007635 502 AILVSLD--NVGV-WNLRVENLDRWYLGQETYMKI 533 (595)
Q Consensus 502 ~Irf~ad--NpG~-W~~HCHil~h~~~Gm~~~~~V 533 (595)
.+.|.+. .||. +-|.|-+--|+. ||-..+.|
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 9999998 7887 999999877877 78877776
No 139
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=76.30 E-value=4.9 Score=39.79 Aligned_cols=78 Identities=12% Similarity=0.130 Sum_probs=58.5
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
+.+.++.|+.|++.+.+. +..|.|.+=. .+--+.+-||-...+.|.++.||.
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~---------------------------lg~k~daiPG~~n~~~~~~~~~G~ 240 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPA---------------------------FAVKQDAVPGRIAQLWFSVDQEGV 240 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGG---------------------------GTEEEEECTTCCEEEEEECSSSEE
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEcc---------------------------cCceEEecCCceEEEEEEeCCCEE
Confidence 447789999999999986 4678777632 222234456777789999999999
Q ss_pred eeeeecc-ccceeccceeEEEEeCCCC
Q 007635 513 WNLRVEN-LDRWYLGQETYMKIVNPEE 538 (595)
Q Consensus 513 W~~HCHi-l~h~~~Gm~~~~~V~~~~~ 538 (595)
+...|.. --.-|..|-..+.|.++++
T Consensus 241 y~g~CsE~CG~~Hs~M~~~v~vvs~~~ 267 (298)
T 3hb3_B 241 YFGQCSELCGINHAYMPIVVKAVSQEK 267 (298)
T ss_dssp EEECCCSCCSTTTTSCCEEEEEECHHH
T ss_pred EEEEcccccCcCccCCeeEEEEEcHHH
Confidence 9999985 3356888888888886653
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=76.25 E-value=34 Score=28.83 Aligned_cols=75 Identities=9% Similarity=0.055 Sum_probs=51.3
Q ss_pred eeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCC----CccCCCCeEEEEEEecC
Q 007635 47 VPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTN----CPIPSQWNWTYQFQVKD 122 (595)
Q Consensus 47 ~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq----~~I~PG~~~tY~f~~~~ 122 (595)
....+...|-+-=.=+|+...|.+..+.|.+.-.+ ..| -|+||-..+| ..|+||++.+|+...++
T Consensus 20 v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 20 IKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKE 88 (120)
T ss_dssp EEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESS
T ss_pred EEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCC
Confidence 33444555644434588888888888888875221 111 3688876555 34899999999999974
Q ss_pred --ceeeeEEecc
Q 007635 123 --QIGSFFYFPS 132 (595)
Q Consensus 123 --~~Gt~wYH~H 132 (595)
.+|+|..+.-
T Consensus 89 ~~~pG~Ytl~a~ 100 (120)
T 3isy_A 89 VPEPGTYEVKVT 100 (120)
T ss_dssp CCCSEEEEEEEE
T ss_pred CCCCccEEEEEE
Confidence 3799988764
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=75.37 E-value=6.6 Score=36.53 Aligned_cols=77 Identities=12% Similarity=0.075 Sum_probs=55.5
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
+.+.++.|+.|++.+.+. +..|.|-+= +. +=-+.+-||-...+.|.++.||.
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF~IP-------~l--------------------gvK~daiPGr~n~l~~~~~~pG~ 92 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSFFIP-------RL--------------------GSQIYAMAGMQTRLHLIANEPGT 92 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEEEEG-------GG--------------------TEEEEECTTCCEEEEECCSSSEE
T ss_pred ceEEEeCCCEEEEEEecC-CceeeEEec-------cc--------------------CcEEEecCCceEEEEEEeCCCeE
Confidence 457789999999999987 456666553 11 11234456777788899999999
Q ss_pred eeeeecccc-ceeccceeEEEEe-CCC
Q 007635 513 WNLRVENLD-RWYLGQETYMKIV-NPE 537 (595)
Q Consensus 513 W~~HCHil~-h~~~Gm~~~~~V~-~~~ 537 (595)
+...|-..- .-|..|-..+.|. +++
T Consensus 93 y~g~CsE~CG~~Hs~M~~~v~vv~~~~ 119 (205)
T 1cyx_A 93 YDGICAEICGPGHSGMKFKAIATPDRA 119 (205)
T ss_dssp EEEEECSCCSTTSTTCCEEEEEESSHH
T ss_pred EEEEcccccccchhhceEEEEEECCHH
Confidence 999998543 4477888888877 544
No 142
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=74.35 E-value=4.3 Score=40.77 Aligned_cols=70 Identities=14% Similarity=0.299 Sum_probs=42.0
Q ss_pred eeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCcee---ecCCCcc-------CCCCCCC------CCCC-CCCccC
Q 007635 47 VPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLLM---TWPGIQM-------RRNSWQD------GVQG-TNCPIP 109 (595)
Q Consensus 47 ~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~si---H~HG~~~-------~~~~~~D------Gv~~-tq~~I~ 109 (595)
++.++...|=++||-++ ++.++|+|+.+++..| -.-|++. ..+.+-| |... .+.||+
T Consensus 250 V~~~v~~A~Y~vpgR~l------~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~ 323 (382)
T 1yew_A 250 VSVKVEDATYRVPGRAM------RMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLA 323 (382)
T ss_dssp EEEEEEEEEEESSCSEE------EEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBC
T ss_pred eEEEeeccEEecCCcEE------EEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcC
Confidence 34455555556788888 4568889988765431 2222222 1111222 3223 458899
Q ss_pred CCCeEEEEEEecC
Q 007635 110 SQWNWTYQFQVKD 122 (595)
Q Consensus 110 PG~~~tY~f~~~~ 122 (595)
|||+.+.+.++.|
T Consensus 324 PGETr~~~v~a~d 336 (382)
T 1yew_A 324 PGETRTVDVTASD 336 (382)
T ss_dssp TTCEEEEEEEEEC
T ss_pred CCceeEEEEEeeh
Confidence 9999999998854
No 143
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=69.66 E-value=28 Score=29.39 Aligned_cols=72 Identities=13% Similarity=0.346 Sum_probs=49.0
Q ss_pred CCCEE--EEEEEEcCCCceEEEEEe-Ccc--ceeeeccCcccc--------ceeecEEEEcCCcEEEEEEEcCC--CCCc
Q 007635 223 PGKTY--RVRVHNVGTSTSLNFRIQ-NHN--LLLVETEGHYTS--------QQNYTSFEIHVGQSYSFLVTMDQ--NASS 287 (595)
Q Consensus 223 ~G~~~--rlRliN~~~~~~~~~~i~-gh~--~~vi~~DG~~~~--------p~~~~~l~i~pG~R~dvlv~~~~--~~g~ 287 (595)
.|+.+ .|-+.|.+.. ...+.+. |+. |.|...+|..+- .+......|.|||...+-.+.++ .+|
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG- 93 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPG- 93 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSE-
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCc-
Confidence 45544 6777888876 4566654 444 444444565442 33567899999999999999885 357
Q ss_pred ceEEEEeee
Q 007635 288 DYYIVASAR 296 (595)
Q Consensus 288 ~y~i~~~~~ 296 (595)
.|.+.+...
T Consensus 94 ~Ytl~a~l~ 102 (120)
T 3isy_A 94 TYEVKVTFK 102 (120)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEEE
Confidence 999988654
No 144
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=67.92 E-value=9.7 Score=36.97 Aligned_cols=77 Identities=10% Similarity=0.204 Sum_probs=55.5
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
+.+.++.|+.|++.+.+. +..|.|.+=... .. +.+-||....+.|.++.||.
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~------------------------~k---~da~PG~~n~~~~~~~~~G~ 222 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFG------------------------VK---QDAVPGRLAQLWFRAEREGI 222 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGT------------------------EE---EEECBTCCEEEEEECCSCEE
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccC------------------------ce---EEecCCceeEEEEecCCcEE
Confidence 447789999999999987 456766663221 12 23446667788899999999
Q ss_pred eeeeeccc-cceeccceeEEEEeCCC
Q 007635 513 WNLRVENL-DRWYLGQETYMKIVNPE 537 (595)
Q Consensus 513 W~~HCHil-~h~~~Gm~~~~~V~~~~ 537 (595)
+...|-.. -.-|..|-..+.|.+++
T Consensus 223 y~g~Cse~CG~~H~~M~~~v~vv~~~ 248 (262)
T 2gsm_B 223 FFGQCSELCGISHAYMPITVKVVSEE 248 (262)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEChHhcccCcccCeEEEEEEcHH
Confidence 99999853 34577888888877654
No 145
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=67.02 E-value=11 Score=35.09 Aligned_cols=74 Identities=12% Similarity=0.038 Sum_probs=51.2
Q ss_pred ceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccc-hhhhcc
Q 007635 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL-NLQRVS 139 (595)
Q Consensus 61 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~-~~q~~~ 139 (595)
..|.+..|+.|++.+++. +. | ||...+.- +-+.-+-||..-...|.+ +++|+|+..|.- -+..-.
T Consensus 41 n~l~lP~g~~V~~~lTS~-DV---i--HSF~IP~l-------gvK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~Hs 106 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SV---M--HSFFIPRL-------GSQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGHS 106 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SS---C--EEEEEGGG-------TEEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTST
T ss_pred ceEEEeCCCEEEEEEecC-Cc---e--eeEEeccc-------CcEEEecCCceEEEEEEe-CCCeEEEEEcccccccchh
Confidence 378999999999999987 22 2 33322110 113446789999999988 689999999982 233334
Q ss_pred CccccEEEc
Q 007635 140 GGFGPVIIN 148 (595)
Q Consensus 140 Gl~G~liV~ 148 (595)
.|.+.++|.
T Consensus 107 ~M~~~v~vv 115 (205)
T 1cyx_A 107 GMKFKAIAT 115 (205)
T ss_dssp TCCEEEEEE
T ss_pred hceEEEEEE
Confidence 577778777
No 146
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=59.50 E-value=14 Score=34.98 Aligned_cols=77 Identities=8% Similarity=0.135 Sum_probs=54.5
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
+.+.++.|+.|++.+.+. +..|.|.+=... ... .+-||-...+.|.++.||.
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg------------------------~K~---DaiPGr~n~~~~~~~~~G~ 191 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLG------------------------LKT---DAIPGRLNQTTLMSSRPGL 191 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGT------------------------EEE---EECTTCCEEEEECCSSCEE
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccC------------------------cEE---EecCCceEEEEEecCCcEE
Confidence 457789999999999986 456776663211 222 3455666778899999999
Q ss_pred eeeeecccc-ceeccceeEEEEeCCC
Q 007635 513 WNLRVENLD-RWYLGQETYMKIVNPE 537 (595)
Q Consensus 513 W~~HCHil~-h~~~Gm~~~~~V~~~~ 537 (595)
+...|.-.- .-|..|-..+.|.+++
T Consensus 192 y~g~Cse~CG~~Hs~M~~~v~vv~~~ 217 (227)
T 1v54_B 192 YYGQCSEICGSNHSFMPIVLELVPLK 217 (227)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEehhhcccccccCeEEEEEEcHH
Confidence 999998533 3477777777777543
No 147
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=52.33 E-value=18 Score=30.86 Aligned_cols=70 Identities=7% Similarity=0.192 Sum_probs=38.5
Q ss_pred EEECCCCCCceEEecCCCEEEEEEEeCCC---CC--ceee--cCCCccCC-CCCCCCCCCCCCccCCCCeEEEEEEec
Q 007635 52 IAINGKFPGAVLNATTNNNIVINVQNDLD---ES--LLMT--WPGIQMRR-NSWQDGVQGTNCPIPSQWNWTYQFQVK 121 (595)
Q Consensus 52 ~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~---~~--~siH--~HG~~~~~-~~~~DGv~~tq~~I~PG~~~tY~f~~~ 121 (595)
..|+|=-+.+.=.++.|..+.|.+.=..+ .. +.+| ..|+..+- ....|+=.++.|||.+|+.++|.+..+
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 34444213445567778777777662221 11 1232 24544421 112333323679999999999997774
No 148
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=52.03 E-value=46 Score=27.63 Aligned_cols=46 Identities=15% Similarity=0.390 Sum_probs=31.4
Q ss_pred EEEEEEEEcCCC-ceEEEEEeCc-cceeeeccCccccceeecEEEEcCCcEEEEEEEc
Q 007635 226 TYRVRVHNVGTS-TSLNFRIQNH-NLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTM 281 (595)
Q Consensus 226 ~~rlRliN~~~~-~~~~~~i~gh-~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~ 281 (595)
.|+|||+|.+.. ..+.+++.|. .+.++ | + ..+.+.|||..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 599999999975 4666777774 23332 2 1 13899999977766544
No 149
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=50.78 E-value=30 Score=34.14 Aligned_cols=76 Identities=16% Similarity=0.001 Sum_probs=50.8
Q ss_pred ceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccc-hhhhcc
Q 007635 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL-NLQRVS 139 (595)
Q Consensus 61 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~-~~q~~~ 139 (595)
..+.+..|+.|++.+++. +.-++...-.+ +-+.-+-||..-...|++ +++|+|+..|.. -+..-.
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~l------------g~k~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~Hs 254 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAF------------AVKQDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINHA 254 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGG------------TEEEEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTTT
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEccc------------CceEEecCCceEEEEEEe-CCCEEEEEEcccccCcCcc
Confidence 578999999999999996 22222222111 112335689888889998 689999999982 233334
Q ss_pred CccccEEEccC
Q 007635 140 GGFGPVIINNR 150 (595)
Q Consensus 140 Gl~G~liV~~~ 150 (595)
.|.+.+.|.++
T Consensus 255 ~M~~~v~vvs~ 265 (298)
T 3hb3_B 255 YMPIVVKAVSQ 265 (298)
T ss_dssp SCCEEEEEECH
T ss_pred CCeeEEEEEcH
Confidence 57777777653
No 150
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=50.76 E-value=64 Score=32.80 Aligned_cols=93 Identities=22% Similarity=0.266 Sum_probs=0.0
Q ss_pred eeEEEEEECCCCCCceEEecCCCEEEEEEEeCCCCCce---eecCCCccCCCCC-------------CCCCCCCCCccCC
Q 007635 47 VPQQVIAINGKFPGAVLNATTNNNIVINVQNDLDESLL---MTWPGIQMRRNSW-------------QDGVQGTNCPIPS 110 (595)
Q Consensus 47 ~~~~~~~~Ng~~PGP~i~v~~Gd~v~v~v~N~l~~~~s---iH~HG~~~~~~~~-------------~DGv~~tq~~I~P 110 (595)
++.++...+=+.||-++ ++.++|+|+.+++.. .-.-|++.....- .+|.. +..||+|
T Consensus 284 V~~~v~~A~Y~vpgR~l------~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~pI~P 356 (419)
T 3rfr_A 284 VTTELNGGVYKVPGREL------TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDDVIAP 356 (419)
T ss_dssp CEEEEEEEEEESSSSEE------EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCCCBCT
T ss_pred eEEEEeceEEecCCcEE------EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCCCcCC
Q ss_pred CCeEEEEEEecC------------------ceeeeEEeccchhhhccCccccEE
Q 007635 111 QWNWTYQFQVKD------------------QIGSFFYFPSLNLQRVSGGFGPVI 146 (595)
Q Consensus 111 G~~~tY~f~~~~------------------~~Gt~wYH~H~~~q~~~Gl~G~li 146 (595)
||+.+.+.++.| -.|..++.+-.+..+..-..|++|
T Consensus 357 GETrt~~V~a~da~WeveRL~~l~~D~dSrfgGLLfF~d~~G~r~i~~I~~pvI 410 (419)
T 3rfr_A 357 GESKEIVVKIQDARWDIERLSDLAYDTDSQVGGLLFFFTPDGKRFAAEIGGPVI 410 (419)
T ss_dssp TCEEEEEEEEECHHHHHTTGGGGGGSSSCEEEEEEEEECSSSCEEEEEEEEECE
T ss_pred CcceEEEEEeehHHHHHHHHhhhhcCchhheeEEEEEEcCCCCEEEEeccCccc
No 151
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=50.34 E-value=18 Score=30.84 Aligned_cols=69 Identities=20% Similarity=0.329 Sum_probs=38.6
Q ss_pred EEECCCCCCceEEecCCCEEEEEEE---eCCCCCce--ee--cCCCccC-CCCCCCCCC-CCCCccCCCCeEEEEEEec
Q 007635 52 IAINGKFPGAVLNATTNNNIVINVQ---NDLDESLL--MT--WPGIQMR-RNSWQDGVQ-GTNCPIPSQWNWTYQFQVK 121 (595)
Q Consensus 52 ~~~Ng~~PGP~i~v~~Gd~v~v~v~---N~l~~~~s--iH--~HG~~~~-~~~~~DGv~-~tq~~I~PG~~~tY~f~~~ 121 (595)
..|+|= +.+.=.++.|..+.|.+. |.-..... +| ..|+..+ ..+..|+=. ++.|||.+|+.++|.+.++
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 344442 245556677877777766 22111112 22 2344332 112234443 3689999999999998876
No 152
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=50.22 E-value=33 Score=33.14 Aligned_cols=76 Identities=16% Similarity=0.025 Sum_probs=50.5
Q ss_pred ceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccc-hhhhcc
Q 007635 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL-NLQRVS 139 (595)
Q Consensus 61 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~-~~q~~~ 139 (595)
..|.+..|+.|++.+++. +.-++...-.+. -+.-+-||+.-...|++ +++|+|+..|.. -+..-.
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~------------~k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H~ 236 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFG------------VKQDAVPGRLAQLWFRA-EREGIFFGQCSELCGISHA 236 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGT------------EEEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTGG
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccC------------ceEEecCCceeEEEEec-CCcEEEEEEChHhcccCcc
Confidence 469999999999999987 333222222221 12335688888889998 689999999982 222223
Q ss_pred CccccEEEccC
Q 007635 140 GGFGPVIINNR 150 (595)
Q Consensus 140 Gl~G~liV~~~ 150 (595)
.|.+.+.|.++
T Consensus 237 ~M~~~v~vv~~ 247 (262)
T 2gsm_B 237 YMPITVKVVSE 247 (262)
T ss_dssp GCCEEEEEECH
T ss_pred cCeEEEEEEcH
Confidence 47777776653
No 153
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=46.93 E-value=19 Score=35.84 Aligned_cols=77 Identities=12% Similarity=0.082 Sum_probs=54.1
Q ss_pred eeeeecCCcEEEEEEecCCCCceeeeecCceEEEEeecccccCCCCCCCCCcCCCCcccEEEECCCcEEEEEEEeCCcee
Q 007635 433 SLINATYKGFIEIILQNNDTKMQSFHMDGYSFFVVGMDFGIWTESNRNSYNKWDAISKCTTEVYPGAWTAILVSLDNVGV 512 (595)
Q Consensus 433 ~v~~~~~g~~ve~vl~N~~~~~HP~HlHG~~F~Vv~~~~G~~~~~~~~~~n~~~p~~RDTv~v~p~g~~~Irf~adNpG~ 512 (595)
+.+.++.|+.|++.+.+. +..|.|.+=. .+=-+.+-||-...+.|.+|.||.
T Consensus 151 n~l~lP~g~~V~~~lTS~-DViHsf~IP~---------------------------lg~k~DaiPGr~n~~~~~~~~~G~ 202 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN-SVMNSFFIPR---------------------------LGSQIYAMAGMQTRLHLIANEPGT 202 (315)
T ss_dssp SBCCCCSSSEEEEEECBS-SSCEEEEEGG---------------------------GTEEEEECBTSCEEEEEECCSCBC
T ss_pred ceEEEeCCCEEEEEEEeC-Cccceeeecc---------------------------cCcEEeecCCcceeeEEecCCCeE
Confidence 346688999999999876 4567666632 122223456677788899999999
Q ss_pred eeeeecccc-ceeccceeEEEEe-CCC
Q 007635 513 WNLRVENLD-RWYLGQETYMKIV-NPE 537 (595)
Q Consensus 513 W~~HCHil~-h~~~Gm~~~~~V~-~~~ 537 (595)
+...|--.- .-|..|-..+.|. +++
T Consensus 203 y~g~CsE~CG~~Hs~M~~~v~vv~~~~ 229 (315)
T 1fft_B 203 YDGISASYSGPGFSGMKFKAIATPDRA 229 (315)
T ss_dssp CEEBCCSCCSTTTTTCCEECCBCSSTH
T ss_pred EEEeccccchhhHHhccceEEEecCHH
Confidence 999997533 3477777777776 544
No 154
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=43.17 E-value=19 Score=30.14 Aligned_cols=35 Identities=9% Similarity=0.195 Sum_probs=28.5
Q ss_pred EEEEecCceeeeEEeccchhhhccCccccE-EEccCC
Q 007635 116 YQFQVKDQIGSFFYFPSLNLQRVSGGFGPV-IINNRK 151 (595)
Q Consensus 116 Y~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~l-iV~~~~ 151 (595)
..+++ +.+|++||-|-...|=..||...| .|....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 45777 579999999998888889999999 887654
No 155
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=38.86 E-value=22 Score=30.40 Aligned_cols=47 Identities=17% Similarity=0.119 Sum_probs=27.5
Q ss_pred EEEEEeCCCCCc---eeecCCCccCC---CCCCCCCCCCCCccCCCCeEEEEE
Q 007635 72 VINVQNDLDESL---LMTWPGIQMRR---NSWQDGVQGTNCPIPSQWNWTYQF 118 (595)
Q Consensus 72 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DGv~~tq~~I~PG~~~tY~f 118 (595)
.|++.|..+.+. +=||.=....+ .-.-+||-|.|.-|.||++|.|.=
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeC
Confidence 456667655433 34664222111 012467777777799999988873
No 156
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=36.56 E-value=46 Score=31.40 Aligned_cols=75 Identities=9% Similarity=-0.114 Sum_probs=48.1
Q ss_pred ceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccc-hhhhcc
Q 007635 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL-NLQRVS 139 (595)
Q Consensus 61 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~-~~q~~~ 139 (595)
..+.+..|..|++.++.. +.-++...-.+.. +.-.-||+.-...|++ +++|+|+..|.. -+..-.
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~------------K~DaiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~Hs 205 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGL------------KTDAIPGRLNQTTLMS-SRPGLYYGQCSEICGSNHS 205 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGTE------------EEEECTTCCEEEEECC-SSCEEEEECCCSCCSTTGG
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccCc------------EEEecCCceEEEEEec-CCcEEEEEEehhhcccccc
Confidence 578999999999999986 2333322222211 1224678888888888 689999999982 121222
Q ss_pred CccccEEEcc
Q 007635 140 GGFGPVIINN 149 (595)
Q Consensus 140 Gl~G~liV~~ 149 (595)
-|.+.+.+.+
T Consensus 206 ~M~~~v~vv~ 215 (227)
T 1v54_B 206 FMPIVLELVP 215 (227)
T ss_dssp GCCEEEEEEC
T ss_pred cCeEEEEEEc
Confidence 3556665554
No 157
>3j0f_E E1 envelope glycoprotein; alphavirus, virus assembly; 7.00A {Sindbis virus} PDB: 1ld4_M 1z8y_I
Probab=36.32 E-value=67 Score=32.24 Aligned_cols=28 Identities=14% Similarity=0.093 Sum_probs=23.3
Q ss_pred EEEECCCcEEEEEEEeCCceeeeeeecc
Q 007635 492 TTEVYPGAWTAILVSLDNVGVWNLRVEN 519 (595)
Q Consensus 492 Tv~v~p~g~~~Irf~adNpG~W~~HCHi 519 (595)
|....-||.++|.+++|.+|.=..|.|-
T Consensus 307 tySsDfGGvatl~Y~~~k~GkCaVHs~S 334 (439)
T 3j0f_E 307 TYSADFGGMATLQYVSDREGQCPVHSHS 334 (439)
T ss_pred EeccCcCceEEEEEecCCCcccceeccC
Confidence 4444569999999999999998888885
No 158
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=35.92 E-value=22 Score=30.28 Aligned_cols=47 Identities=21% Similarity=0.260 Sum_probs=27.1
Q ss_pred EEEEEeCCCCCc---eeecCCCccCC---CCCCCCCCCCCCccCCCCeEEEEE
Q 007635 72 VINVQNDLDESL---LMTWPGIQMRR---NSWQDGVQGTNCPIPSQWNWTYQF 118 (595)
Q Consensus 72 ~v~v~N~l~~~~---siH~HG~~~~~---~~~~DGv~~tq~~I~PG~~~tY~f 118 (595)
.|++.|..+.+. +=||.=....+ .-.-+||-|.|.-|.||++|.|.=
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 85 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSS 85 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeC
Confidence 456666655432 34664222111 012457767777799999998873
No 159
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=33.61 E-value=30 Score=29.98 Aligned_cols=47 Identities=13% Similarity=0.122 Sum_probs=27.2
Q ss_pred EEEEEeCCCCCc---eeecCCCccCCC---CCCCCCCCCCCccCCCCeEEEEE
Q 007635 72 VINVQNDLDESL---LMTWPGIQMRRN---SWQDGVQGTNCPIPSQWNWTYQF 118 (595)
Q Consensus 72 ~v~v~N~l~~~~---siH~HG~~~~~~---~~~DGv~~tq~~I~PG~~~tY~f 118 (595)
.|++.|..+.+. +=||.=....+. -.-+||-|.|.-|.||++|.|.=
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtS 90 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTS 90 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcC
Confidence 455566655432 346642221110 12467777777899999998873
No 160
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=29.69 E-value=2.3e+02 Score=24.01 Aligned_cols=65 Identities=14% Similarity=0.194 Sum_probs=37.5
Q ss_pred CceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCC--------CCCCCccCCCCeEEEEEEecCceeee
Q 007635 60 GAVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGV--------QGTNCPIPSQWNWTYQFQVKDQIGSF 127 (595)
Q Consensus 60 GP~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv--------~~tq~~I~PG~~~tY~f~~~~~~Gt~ 127 (595)
|-+|.++.||++.|.+.-+-....+-..... .+..-.|++ |.....+-.|+...+.|++. ++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~--~~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A~-~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGG--TKESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTVK-AAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTT--BSSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEEC-SSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecC--CCccccccceeecceeeeCCCCCcCCCcEEEEEEEEc-cCceE
Confidence 5699999999999999977543333222221 111112222 11111245567888888885 67753
No 161
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=29.29 E-value=27 Score=30.09 Aligned_cols=21 Identities=29% Similarity=0.464 Sum_probs=16.7
Q ss_pred CCCCCCCCCccCCCCeEEEEE
Q 007635 98 QDGVQGTNCPIPSQWNWTYQF 118 (595)
Q Consensus 98 ~DGv~~tq~~I~PG~~~tY~f 118 (595)
-+||-|.|.-|.||++|.|.=
T Consensus 65 G~GVVGeqP~L~PGe~F~YtS 85 (134)
T 1tza_A 65 GAGVVGETPTIPPNTAYQYTS 85 (134)
T ss_dssp EESBTTBCCEECTTEEEEEEE
T ss_pred cCceEcCCCcCCCCCceEEcC
Confidence 467777777799999999873
No 162
>3j0c_A E1 envelope glycoprotein; alphavirus, bioweapon; 4.80A {Venezuelan equine encephalitis virus}
Probab=29.03 E-value=45 Score=33.48 Aligned_cols=23 Identities=17% Similarity=0.200 Sum_probs=21.1
Q ss_pred CCcEEEEEEEeCCceeeeeeecc
Q 007635 497 PGAWTAILVSLDNVGVWNLRVEN 519 (595)
Q Consensus 497 p~g~~~Irf~adNpG~W~~HCHi 519 (595)
-||.++|.+++|.+|.=..|.|-
T Consensus 312 fGGvatl~Y~~~k~GkCaVHs~S 334 (442)
T 3j0c_A 312 FGGIATVKYSASKSGKCAVHVPS 334 (442)
T ss_dssp CCEEEEEEEEESSCEEEEEECSS
T ss_pred cCceEEEEEecCCCcccceeccC
Confidence 58999999999999999999885
No 163
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=26.29 E-value=59 Score=26.79 Aligned_cols=37 Identities=8% Similarity=0.178 Sum_probs=0.0
Q ss_pred EEEEEecCceeeeEEeccchhhhccCccccEEEccCCC
Q 007635 115 TYQFQVKDQIGSFFYFPSLNLQRVSGGFGPVIINNRKV 152 (595)
Q Consensus 115 tY~f~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~~ 152 (595)
...+++ +.+|++||-|-...|=..||...|.|.....
T Consensus 71 ~~~v~L-~~~G~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 71 ADSIPL-KRPGTFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp EEEEEC-CSSEEEEEECCSTTTTTTTCEEEEEECC---
T ss_pred CEEEEE-CCCcCEEEECCCCCcccCCCEEEEEEcCCCC
No 164
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=25.41 E-value=35 Score=27.61 Aligned_cols=24 Identities=17% Similarity=0.008 Sum_probs=21.5
Q ss_pred EEEEECCCCCCceEEecCCCEEEE
Q 007635 50 QVIAINGKFPGAVLNATTNNNIVI 73 (595)
Q Consensus 50 ~~~~~Ng~~PGP~i~v~~Gd~v~v 73 (595)
..+++||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 468999998888999999999998
No 165
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=24.22 E-value=61 Score=27.05 Aligned_cols=34 Identities=15% Similarity=0.075 Sum_probs=28.1
Q ss_pred EEEeCCceeeeeeeccccceeccceeEE-EEeCCC
Q 007635 504 LVSLDNVGVWNLRVENLDRWYLGQETYM-KIVNPE 537 (595)
Q Consensus 504 rf~adNpG~W~~HCHil~h~~~Gm~~~~-~V~~~~ 537 (595)
++..+.+|...|=|=...|-..||-+.+ +|.++.
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 4667899999999999999999999999 777543
No 166
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=23.40 E-value=46 Score=25.03 Aligned_cols=25 Identities=16% Similarity=0.150 Sum_probs=21.6
Q ss_pred EEEEEECCCC-CCceEEecCCCEEEE
Q 007635 49 QQVIAINGKF-PGAVLNATTNNNIVI 73 (595)
Q Consensus 49 ~~~~~~Ng~~-PGP~i~v~~Gd~v~v 73 (595)
.-.+.+||++ +++.-.++.||+|.|
T Consensus 42 ~~~vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 42 VCAIALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp TCEEEESSSEECCTTCCCCTTCEEEE
T ss_pred ccEEEECCEEcCCCCcCCCCCCEEEE
Confidence 3568999999 888889999999887
No 167
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=22.94 E-value=3.4e+02 Score=22.77 Aligned_cols=69 Identities=14% Similarity=0.095 Sum_probs=44.7
Q ss_pred EecCCCEE--EEEEEEcCCCceEEEEEeCccceeeeccCccccceeecEEEEcCCcEEEEEEEcCC-CCCcceEEEEeee
Q 007635 220 NVDPGKTY--RVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQ-NASSDYYIVASAR 296 (595)
Q Consensus 220 ~v~~G~~~--rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~-~~g~~y~i~~~~~ 296 (595)
.+.+|+.+ +..+-|.|....-.+.+ .+ -.||..+.. ..+.|++|+.-.|.+.... .+| .|.+.+..+
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~l-yvng~~v~t---~~v~La~G~s~tv~f~~~~~~~G-~~~v~AvVD 97 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RV-YINGTLYKN---WTVSLGPKEEKVLTFNWTPTQEG-MYRINATVD 97 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EE-EETTEEEEE---EEEEECTTCEEEEEEEECCSSCE-EEEEEEEES
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EE-EECCEEEee---EEeccCCCCeEEEEEEEEcCCCc-EEEEEEEEc
Confidence 66788876 66789999875433332 22 126655432 2457999999888887653 345 899988765
Q ss_pred cc
Q 007635 297 FV 298 (595)
Q Consensus 297 ~~ 298 (595)
..
T Consensus 98 ~~ 99 (127)
T 3idu_A 98 EE 99 (127)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 168
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=22.78 E-value=65 Score=31.96 Aligned_cols=74 Identities=11% Similarity=0.057 Sum_probs=48.7
Q ss_pred ceEEecCCCEEEEEEEeCCCCCceeecCCCccCCCCCCCCCCCCCCccCCCCeEEEEEEecCceeeeEEeccc-hhhhcc
Q 007635 61 AVLNATTNNNIVINVQNDLDESLLMTWPGIQMRRNSWQDGVQGTNCPIPSQWNWTYQFQVKDQIGSFFYFPSL-NLQRVS 139 (595)
Q Consensus 61 P~i~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGv~~tq~~I~PG~~~tY~f~~~~~~Gt~wYH~H~-~~q~~~ 139 (595)
..|.+..|..|++.++.. +.-++...-.+ +-+.-+-||..-...|++ +++|+|+..|.. -+..-.
T Consensus 151 n~l~lP~g~~V~~~lTS~-DViHsf~IP~l------------g~k~DaiPGr~n~~~~~~-~~~G~y~g~CsE~CG~~Hs 216 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN-SVMNSFFIPRL------------GSQIYAMAGMQTRLHLIA-NEPGTYDGISASYSGPGFS 216 (315)
T ss_dssp SBCCCCSSSEEEEEECBS-SSCEEEEEGGG------------TEEEEECBTSCEEEEEEC-CSCBCCEEBCCSCCSTTTT
T ss_pred ceEEEeCCCEEEEEEEeC-Cccceeeeccc------------CcEEeecCCcceeeEEec-CCCeEEEEeccccchhhHH
Confidence 478899999999999876 23222222222 112335688888888988 689999999972 222223
Q ss_pred CccccEEEc
Q 007635 140 GGFGPVIIN 148 (595)
Q Consensus 140 Gl~G~liV~ 148 (595)
.|.+.++|.
T Consensus 217 ~M~~~v~vv 225 (315)
T 1fft_B 217 GMKFKAIAT 225 (315)
T ss_dssp TCCEECCBC
T ss_pred hccceEEEe
Confidence 566666666
No 169
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=22.57 E-value=26 Score=29.92 Aligned_cols=20 Identities=30% Similarity=0.346 Sum_probs=16.7
Q ss_pred eEEEecCCCEEEEEEEEcCC
Q 007635 217 ETINVDPGKTYRVRVHNVGT 236 (595)
Q Consensus 217 ~~~~v~~G~~~rlRliN~~~ 236 (595)
-.|+|++||++||.+.|-+.
T Consensus 71 k~InV~~GETVrF~v~nkt~ 90 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIV 90 (131)
T ss_dssp CEEEEETTCEEEEEETTEEE
T ss_pred eEEEecCCCEEEEEeCCcEE
Confidence 45999999999999988543
No 170
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=22.44 E-value=44 Score=26.75 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=36.2
Q ss_pred ecCCCEEEEEEEEcCCCceEEEEEeCccceeeeccCccccceeecEEEEcCCcEEEEEEEcCCC--CCcceEEEEee
Q 007635 221 VDPGKTYRVRVHNVGTSTSLNFRIQNHNLLLVETEGHYTSQQNYTSFEIHVGQSYSFLVTMDQN--ASSDYYIVASA 295 (595)
Q Consensus 221 v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~i~pG~R~dvlv~~~~~--~g~~y~i~~~~ 295 (595)
-+|||++++|++-..... ....-.--.+++..-+|..+... .........++.-+..+.. .| .|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~-~p~~~~~~~v~l~dp~g~~v~~~---~~~~~~~G~~~~~f~Lp~~~~~G-~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENF-HPLNELIPLVYIQDPKGNRIAQW---QSFQLEGGLKQFSFPLSSEPFQG-SYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGG-CBCCCEEEEEEEECTTSCEEEEE---EEEECBTTEEEEEEECCSSCCCE-EEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCC-cCCCCCceEEEEECCCCCEEEEE---EeecCCCCEEEEEEECCCCCCCe-eEEEEEEE
Confidence 479999999987653321 10000001344555566544211 1222234456666666543 36 89888865
Done!