Query 007637
Match_columns 595
No_of_seqs 177 out of 2439
Neff 8.5
Searched_HMMs 46136
Date Thu Mar 28 13:19:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007637.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007637hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 9.1E-45 2E-49 396.3 40.5 532 27-570 32-568 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 7.1E-39 1.5E-43 333.4 33.2 455 25-565 14-490 (498)
3 PRK10207 dipeptide/tripeptide 100.0 9.9E-36 2.1E-40 324.9 41.3 457 27-567 9-481 (489)
4 PRK15462 dipeptide/tripeptide 100.0 7.2E-35 1.6E-39 314.1 40.3 449 28-554 5-469 (493)
5 TIGR00924 yjdL_sub1_fam amino 100.0 5.9E-35 1.3E-39 318.4 39.7 451 28-566 6-472 (475)
6 PRK09584 tppB putative tripept 100.0 3.9E-33 8.4E-38 305.9 42.4 454 29-567 18-484 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 3.8E-26 8.2E-31 254.5 42.2 331 46-435 1-339 (654)
8 PRK05122 major facilitator sup 99.9 4.6E-23 1E-27 220.0 36.7 376 29-562 12-389 (399)
9 PRK11646 multidrug resistance 99.9 4.5E-23 9.7E-28 220.5 33.5 371 35-559 13-385 (400)
10 PRK11551 putative 3-hydroxyphe 99.9 7.6E-23 1.7E-27 218.8 34.4 181 28-241 11-191 (406)
11 PRK03545 putative arabinose tr 99.9 1.2E-22 2.6E-27 216.3 35.7 368 31-562 8-380 (390)
12 PRK12382 putative transporter; 99.9 4.9E-22 1.1E-26 211.7 37.8 372 32-561 15-388 (392)
13 PRK10504 putative transporter; 99.9 5E-22 1.1E-26 216.9 38.0 178 32-242 10-187 (471)
14 PRK10054 putative transporter; 99.9 1.5E-22 3.2E-27 216.1 32.5 176 30-238 5-180 (395)
15 COG2814 AraJ Arabinose efflux 99.9 6.9E-22 1.5E-26 204.6 35.6 378 28-565 9-389 (394)
16 PRK09874 drug efflux system pr 99.9 6.8E-22 1.5E-26 211.3 33.4 377 33-562 15-398 (408)
17 PRK11663 regulatory protein Uh 99.9 9.4E-22 2E-26 212.6 34.6 172 32-236 23-194 (434)
18 TIGR01299 synapt_SV2 synaptic 99.9 5.2E-22 1.1E-26 224.1 33.1 152 52-235 186-350 (742)
19 TIGR00903 2A0129 major facilit 99.9 1.4E-21 3E-26 206.4 34.3 158 52-242 10-167 (368)
20 PRK10489 enterobactin exporter 99.9 1.8E-21 3.9E-26 209.2 35.1 379 37-567 22-404 (417)
21 PRK14995 methyl viologen resis 99.9 7.5E-22 1.6E-26 217.0 32.1 401 32-521 6-413 (495)
22 TIGR00893 2A0114 d-galactonate 99.9 5.9E-22 1.3E-26 209.1 30.0 157 53-241 14-170 (399)
23 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.1E-21 2.5E-26 210.5 32.5 181 29-242 5-191 (412)
24 TIGR00892 2A0113 monocarboxyla 99.9 4.5E-22 9.8E-27 216.3 28.5 152 55-239 41-193 (455)
25 PRK15402 multidrug efflux syst 99.9 2.4E-21 5.3E-26 207.4 33.7 163 46-241 27-189 (406)
26 TIGR00899 2A0120 sugar efflux 99.9 3.4E-21 7.5E-26 203.2 34.1 174 39-242 4-178 (375)
27 TIGR00900 2A0121 H+ Antiporter 99.9 2E-21 4.4E-26 203.4 31.9 357 37-520 4-362 (365)
28 PRK09705 cynX putative cyanate 99.9 3.4E-21 7.3E-26 205.6 34.0 152 47-232 24-176 (393)
29 PRK10077 xylE D-xylose transpo 99.9 1.3E-21 2.8E-26 213.9 30.5 186 30-236 10-211 (479)
30 PRK10213 nepI ribonucleoside t 99.9 9.6E-21 2.1E-25 202.1 36.2 176 27-235 15-190 (394)
31 TIGR00891 2A0112 putative sial 99.9 2.6E-21 5.7E-26 205.9 31.7 173 27-232 7-181 (405)
32 COG2271 UhpC Sugar phosphate p 99.9 4.4E-22 9.6E-27 203.4 23.4 396 35-564 28-436 (448)
33 KOG2532 Permease of the major 99.9 2.7E-22 5.8E-27 215.7 22.6 376 62-563 67-448 (466)
34 PRK09556 uhpT sugar phosphate 99.9 9.2E-22 2E-26 214.7 26.8 159 54-239 50-211 (467)
35 TIGR00894 2A0114euk Na(+)-depe 99.9 1.9E-21 4.1E-26 212.1 28.8 150 62-241 70-220 (465)
36 PRK10091 MFS transport protein 99.9 1.5E-20 3.3E-25 199.7 34.2 176 33-241 4-179 (382)
37 TIGR00711 efflux_EmrB drug res 99.9 6.5E-21 1.4E-25 208.6 30.9 387 37-520 7-409 (485)
38 TIGR00890 2A0111 Oxalate/Forma 99.9 3.5E-21 7.5E-26 202.4 27.2 154 53-239 23-176 (377)
39 TIGR00879 SP MFS transporter, 99.9 4.4E-21 9.5E-26 208.1 28.9 143 65-236 68-213 (481)
40 PF07690 MFS_1: Major Facilita 99.9 1.6E-21 3.5E-26 203.3 24.4 169 39-239 3-171 (352)
41 PRK03699 putative transporter; 99.9 3.7E-20 8E-25 197.6 35.4 174 29-235 4-178 (394)
42 PLN00028 nitrate transmembrane 99.9 2.2E-20 4.7E-25 204.3 34.1 176 30-239 34-218 (476)
43 PRK10406 alpha-ketoglutarate t 99.9 4E-20 8.7E-25 199.8 35.7 174 33-231 23-210 (432)
44 TIGR00710 efflux_Bcr_CflA drug 99.9 3.7E-20 8.1E-25 195.9 34.5 179 30-241 3-181 (385)
45 PRK12307 putative sialic acid 99.9 8.7E-21 1.9E-25 204.2 30.1 167 29-228 15-181 (426)
46 PRK09952 shikimate transporter 99.9 2.8E-20 6E-25 201.4 33.9 177 29-230 19-210 (438)
47 PRK11273 glpT sn-glycerol-3-ph 99.9 2.1E-20 4.5E-25 203.2 32.8 160 54-242 50-210 (452)
48 PRK10642 proline/glycine betai 99.9 8.4E-20 1.8E-24 200.5 37.6 175 31-230 15-203 (490)
49 cd06174 MFS The Major Facilita 99.9 2.3E-20 5E-25 193.8 31.0 344 37-559 4-349 (352)
50 TIGR00895 2A0115 benzoate tran 99.9 2.8E-20 6.1E-25 197.1 32.0 180 29-241 14-193 (398)
51 PRK09528 lacY galactoside perm 99.9 1.8E-20 3.8E-25 201.7 29.7 391 32-562 10-403 (420)
52 TIGR00887 2A0109 phosphate:H+ 99.9 8.9E-20 1.9E-24 200.9 35.8 182 28-235 12-220 (502)
53 PRK15011 sugar efflux transpor 99.9 1.2E-19 2.6E-24 193.6 34.9 178 34-242 17-196 (393)
54 TIGR00897 2A0118 polyol permea 99.9 4.6E-19 1E-23 189.7 38.6 169 30-227 11-180 (402)
55 PRK03633 putative MFS family t 99.9 1.1E-19 2.4E-24 193.0 33.5 157 32-221 6-162 (381)
56 PRK03893 putative sialic acid 99.9 1E-19 2.2E-24 200.0 34.2 168 28-228 16-183 (496)
57 PRK11652 emrD multidrug resist 99.9 1.8E-19 3.9E-24 192.1 34.9 177 29-238 5-181 (394)
58 TIGR00898 2A0119 cation transp 99.9 4.4E-20 9.6E-25 203.4 30.7 145 57-236 113-260 (505)
59 TIGR00902 2A0127 phenyl propri 99.9 3.7E-19 8E-24 189.1 36.6 361 35-557 7-374 (382)
60 PF00854 PTR2: POT family; In 99.9 5.1E-22 1.1E-26 210.3 14.3 364 100-505 2-370 (372)
61 PRK11195 lysophospholipid tran 99.9 2.3E-19 5E-24 191.4 34.6 162 34-232 5-166 (393)
62 PRK15403 multidrug efflux syst 99.9 4.1E-19 8.9E-24 190.7 36.4 152 59-242 42-193 (413)
63 PRK11043 putative transporter; 99.9 5.4E-19 1.2E-23 188.9 35.2 162 45-238 16-179 (401)
64 TIGR00712 glpT glycerol-3-phos 99.9 1E-19 2.2E-24 196.9 28.1 160 54-242 48-208 (438)
65 TIGR00882 2A0105 oligosacchari 99.9 4.5E-19 9.7E-24 189.3 32.0 386 33-559 3-392 (396)
66 PF05977 MFS_3: Transmembrane 99.9 2.2E-18 4.7E-23 188.6 37.9 358 30-522 11-370 (524)
67 PRK10473 multidrug efflux syst 99.9 2.3E-18 5E-23 183.4 36.3 169 40-241 11-179 (392)
68 TIGR00881 2A0104 phosphoglycer 99.9 6.4E-20 1.4E-24 192.9 23.9 156 53-240 15-171 (379)
69 KOG1330 Sugar transporter/spin 99.9 8.7E-21 1.9E-25 195.7 16.2 182 28-242 29-211 (493)
70 PRK15034 nitrate/nitrite trans 99.9 1.1E-18 2.4E-23 186.7 32.6 181 32-241 34-233 (462)
71 PRK15075 citrate-proton sympor 99.8 2.9E-18 6.2E-23 185.4 34.7 171 32-227 15-199 (434)
72 TIGR00792 gph sugar (Glycoside 99.8 2E-18 4.4E-23 186.4 31.9 354 42-522 9-381 (437)
73 PRK11102 bicyclomycin/multidru 99.8 3.2E-18 7E-23 181.0 32.8 158 51-241 10-167 (377)
74 PRK11128 putative 3-phenylprop 99.8 2.9E-18 6.3E-23 182.2 32.2 338 40-522 12-356 (382)
75 PRK10133 L-fucose transporter; 99.8 5.6E-18 1.2E-22 183.2 34.2 155 29-213 23-177 (438)
76 PRK08633 2-acyl-glycerophospho 99.8 3.8E-18 8.2E-23 206.2 36.1 155 32-215 9-165 (1146)
77 TIGR00889 2A0110 nucleoside tr 99.8 1.2E-17 2.6E-22 179.7 36.0 392 37-565 7-405 (418)
78 PRK06814 acylglycerophosphoeth 99.8 2.6E-18 5.6E-23 207.5 33.2 146 58-234 41-189 (1140)
79 COG2223 NarK Nitrate/nitrite t 99.8 4.5E-18 9.9E-23 174.5 29.0 393 27-565 9-404 (417)
80 PRK11010 ampG muropeptide tran 99.8 6E-17 1.3E-21 177.7 39.4 176 30-237 10-192 (491)
81 KOG0254 Predicted transporter 99.8 7.1E-17 1.5E-21 178.3 34.7 399 69-572 90-493 (513)
82 TIGR00883 2A0106 metabolite-pr 99.8 1E-17 2.3E-22 177.0 27.0 156 54-233 14-184 (394)
83 TIGR00886 2A0108 nitrite extru 99.8 7.4E-18 1.6E-22 177.3 24.6 165 34-230 3-178 (366)
84 KOG0569 Permease of the major 99.8 2.4E-17 5.1E-22 175.9 27.7 393 71-571 63-463 (485)
85 TIGR00896 CynX cyanate transpo 99.8 3.4E-17 7.4E-22 172.0 27.9 142 55-230 22-165 (355)
86 PRK11902 ampG muropeptide tran 99.8 1.2E-15 2.6E-20 163.3 38.1 166 39-235 6-177 (402)
87 PF03825 Nuc_H_symport: Nucleo 99.8 8.6E-16 1.9E-20 163.3 35.1 381 38-564 8-397 (400)
88 TIGR00901 2A0125 AmpG-related 99.8 1.7E-16 3.6E-21 166.8 29.4 156 53-238 8-176 (356)
89 TIGR00885 fucP L-fucose:H+ sym 99.8 5E-16 1.1E-20 166.6 33.0 171 35-235 6-202 (410)
90 TIGR01301 GPH_sucrose GPH fami 99.8 8.6E-16 1.9E-20 165.6 34.8 439 34-564 6-473 (477)
91 PRK10429 melibiose:sodium symp 99.8 5.9E-16 1.3E-20 169.3 31.6 361 40-522 14-394 (473)
92 TIGR00806 rfc RFC reduced fola 99.8 7.4E-16 1.6E-20 162.5 29.4 140 51-224 44-184 (511)
93 PRK09669 putative symporter Ya 99.7 2E-15 4.3E-20 163.8 31.8 172 42-237 19-201 (444)
94 TIGR00788 fbt folate/biopterin 99.7 3.4E-15 7.3E-20 162.8 33.1 380 29-522 22-414 (468)
95 KOG2615 Permease of the major 99.7 3.4E-16 7.4E-21 157.7 22.8 337 63-519 63-412 (451)
96 PF06609 TRI12: Fungal trichot 99.7 4.1E-15 8.8E-20 162.8 31.7 153 53-239 64-216 (599)
97 PRK09848 glucuronide transport 99.7 3E-15 6.6E-20 162.5 30.0 150 40-212 16-174 (448)
98 PF01306 LacY_symp: LacY proto 99.7 2.7E-15 5.8E-20 157.3 24.6 388 32-562 7-400 (412)
99 TIGR02718 sider_RhtX_FptX side 99.7 4.3E-14 9.2E-19 150.6 33.1 177 34-239 3-183 (390)
100 KOG0252 Inorganic phosphate tr 99.7 4.6E-16 1E-20 160.2 17.0 433 30-570 39-505 (538)
101 TIGR00805 oat sodium-independe 99.7 5E-15 1.1E-19 166.7 27.1 201 31-239 31-280 (633)
102 KOG3764 Vesicular amine transp 99.7 7.1E-16 1.5E-20 156.3 17.7 150 62-242 100-249 (464)
103 KOG0255 Synaptic vesicle trans 99.7 6.9E-14 1.5E-18 154.9 34.1 140 61-235 111-250 (521)
104 PF13347 MFS_2: MFS/sugar tran 99.7 5.1E-15 1.1E-19 159.8 23.6 354 42-522 11-385 (428)
105 KOG2504 Monocarboxylate transp 99.7 3.3E-14 7.1E-19 155.1 28.0 409 54-562 67-476 (509)
106 PTZ00207 hypothetical protein; 99.7 4.7E-13 1E-17 147.5 36.9 179 28-238 24-203 (591)
107 PRK11462 putative transporter; 99.6 1.4E-13 3E-18 149.9 29.7 174 40-237 17-201 (460)
108 KOG2533 Permease of the major 99.6 3E-13 6.6E-18 146.3 29.6 154 60-245 73-232 (495)
109 COG0738 FucP Fucose permease [ 99.6 1.4E-12 3E-17 133.5 30.2 137 49-214 29-165 (422)
110 COG2211 MelB Na+/melibiose sym 99.6 2.1E-12 4.6E-17 136.9 29.3 357 41-522 21-397 (467)
111 COG2807 CynX Cyanate permease 99.5 7.1E-12 1.5E-16 126.5 29.1 173 32-239 12-185 (395)
112 PF00083 Sugar_tr: Sugar (and 99.5 2.6E-18 5.7E-23 186.4 -19.7 138 68-234 46-186 (451)
113 PF11700 ATG22: Vacuole efflux 99.5 4.5E-11 9.8E-16 129.8 34.1 360 71-561 73-467 (477)
114 KOG0253 Synaptic vesicle trans 99.5 7.6E-12 1.6E-16 125.7 23.0 154 40-227 85-238 (528)
115 PRK09952 shikimate transporter 99.5 1.8E-12 3.8E-17 140.5 18.4 182 30-239 248-432 (438)
116 PF03209 PUCC: PUCC protein; 99.5 4.1E-10 8.9E-15 116.6 34.4 373 60-559 7-395 (403)
117 PRK15011 sugar efflux transpor 99.4 4.8E-12 1E-16 135.0 20.3 176 30-238 214-389 (393)
118 PRK10642 proline/glycine betai 99.4 2.6E-12 5.6E-17 141.2 18.2 180 30-238 248-428 (490)
119 TIGR00890 2A0111 Oxalate/Forma 99.4 6.3E-12 1.4E-16 132.0 16.2 168 34-232 207-374 (377)
120 TIGR00889 2A0110 nucleoside tr 99.4 7.1E-12 1.5E-16 134.9 16.7 177 37-242 213-404 (418)
121 PRK09556 uhpT sugar phosphate 99.4 1E-11 2.2E-16 135.7 18.0 177 32-238 258-447 (467)
122 PRK09705 cynX putative cyanate 99.4 3E-11 6.6E-16 128.9 20.8 177 33-242 206-383 (393)
123 PRK05122 major facilitator sup 99.4 1.8E-11 3.9E-16 130.6 18.6 166 42-242 226-391 (399)
124 TIGR00883 2A0106 metabolite-pr 99.4 6.8E-12 1.5E-16 132.5 13.9 169 32-229 219-390 (394)
125 PRK03699 putative transporter; 99.4 2.7E-11 5.8E-16 129.3 18.4 170 33-235 206-375 (394)
126 KOG2325 Predicted transporter/ 99.3 2.8E-11 6.1E-16 128.7 17.3 192 24-243 26-232 (488)
127 cd06174 MFS The Major Facilita 99.3 5.7E-11 1.2E-15 123.2 18.9 166 39-236 182-348 (352)
128 TIGR00899 2A0120 sugar efflux 99.3 5.8E-11 1.3E-15 125.1 18.7 159 47-238 214-372 (375)
129 TIGR01299 synapt_SV2 synaptic 99.3 4.9E-11 1.1E-15 135.4 18.3 134 72-238 599-732 (742)
130 KOG4686 Predicted sugar transp 99.3 8.1E-12 1.8E-16 121.2 10.2 379 53-562 64-443 (459)
131 PRK09528 lacY galactoside perm 99.3 1.4E-11 3E-16 132.7 12.9 159 48-238 239-401 (420)
132 PRK11551 putative 3-hydroxyphe 99.3 6.2E-11 1.3E-15 126.7 17.4 165 40-237 228-393 (406)
133 PRK12382 putative transporter; 99.3 8.1E-11 1.8E-15 125.4 17.3 162 43-239 227-388 (392)
134 PRK03893 putative sialic acid 99.3 1.7E-10 3.6E-15 126.9 20.3 149 50-228 293-441 (496)
135 KOG2563 Permease of the major 99.3 3.7E-10 8.1E-15 117.2 21.3 140 49-215 61-202 (480)
136 TIGR00893 2A0114 d-galactonate 99.3 1.2E-10 2.5E-15 122.8 18.1 177 32-237 215-396 (399)
137 PRK09874 drug efflux system pr 99.3 1E-10 2.2E-15 124.9 17.8 166 42-239 229-397 (408)
138 PRK03545 putative arabinose tr 99.3 2.9E-10 6.3E-15 121.1 20.8 172 37-241 210-381 (390)
139 TIGR00880 2_A_01_02 Multidrug 99.3 2.3E-11 5E-16 108.5 10.3 134 74-239 4-137 (141)
140 TIGR00891 2A0112 putative sial 99.3 8.2E-11 1.8E-15 125.1 15.7 157 37-224 243-400 (405)
141 TIGR00902 2A0127 phenyl propri 99.3 2.1E-10 4.5E-15 122.0 18.4 169 32-235 205-374 (382)
142 TIGR00897 2A0118 polyol permea 99.3 1.5E-10 3.2E-15 124.0 17.1 176 33-238 223-399 (402)
143 PRK11663 regulatory protein Uh 99.2 2.5E-10 5.3E-15 123.6 18.6 179 33-240 244-424 (434)
144 PRK15075 citrate-proton sympor 99.2 8E-11 1.7E-15 127.4 14.8 153 38-219 244-398 (434)
145 COG2271 UhpC Sugar phosphate p 99.2 8.4E-11 1.8E-15 121.2 13.9 181 32-241 252-435 (448)
146 PRK10489 enterobactin exporter 99.2 2.3E-10 5E-15 123.0 18.2 163 48-242 239-401 (417)
147 PRK03633 putative MFS family t 99.2 6.4E-10 1.4E-14 118.1 19.9 155 46-236 214-368 (381)
148 KOG2816 Predicted transporter 99.2 3.4E-08 7.4E-13 106.5 32.6 358 37-522 23-393 (463)
149 PRK11273 glpT sn-glycerol-3-ph 99.2 4.8E-10 1E-14 122.0 18.1 178 32-238 253-433 (452)
150 COG2270 Permeases of the major 99.2 5.3E-09 1.2E-13 108.2 23.8 344 50-523 33-405 (438)
151 TIGR00892 2A0113 monocarboxyla 99.2 2.7E-10 5.9E-15 124.1 14.9 173 32-236 241-417 (455)
152 PRK11010 ampG muropeptide tran 99.2 9.5E-10 2.1E-14 120.9 19.2 173 40-240 230-403 (491)
153 PRK10406 alpha-ketoglutarate t 99.2 8.3E-10 1.8E-14 119.4 18.1 169 41-238 252-422 (432)
154 PF11700 ATG22: Vacuole efflux 99.2 1.3E-09 2.8E-14 118.4 19.1 186 30-239 279-467 (477)
155 COG2223 NarK Nitrate/nitrite t 99.2 7.1E-10 1.5E-14 114.6 15.9 184 32-241 218-402 (417)
156 TIGR00879 SP MFS transporter, 99.2 1.2E-09 2.7E-14 118.3 18.8 169 53-242 304-472 (481)
157 COG2814 AraJ Arabinose efflux 99.2 2E-09 4.3E-14 112.3 19.3 178 32-242 211-388 (394)
158 TIGR01272 gluP glucose/galacto 99.2 9.4E-10 2E-14 113.5 16.7 163 31-228 139-303 (310)
159 KOG4686 Predicted sugar transp 99.1 7.5E-10 1.6E-14 107.7 14.4 173 21-227 253-429 (459)
160 PF03092 BT1: BT1 family; Int 99.1 2.9E-08 6.4E-13 107.1 27.8 163 53-241 10-176 (433)
161 TIGR00712 glpT glycerol-3-phos 99.1 1.2E-09 2.5E-14 118.5 15.8 182 33-242 252-435 (438)
162 KOG3626 Organic anion transpor 99.1 2.1E-08 4.5E-13 111.3 25.2 206 32-245 96-348 (735)
163 PRK11128 putative 3-phenylprop 99.1 3.2E-09 7E-14 112.8 18.0 166 32-232 205-371 (382)
164 TIGR00881 2A0104 phosphoglycer 99.1 8E-10 1.7E-14 116.0 12.4 163 32-222 216-379 (379)
165 PRK10504 putative transporter; 99.1 3.8E-09 8.1E-14 115.5 17.7 157 33-218 262-418 (471)
166 TIGR01272 gluP glucose/galacto 99.1 1.8E-08 3.9E-13 104.0 21.0 84 144-234 8-107 (310)
167 PF03137 OATP: Organic Anion T 99.1 2.3E-11 4.9E-16 134.0 -0.7 189 46-246 16-256 (539)
168 TIGR00882 2A0105 oligosacchari 99.1 2.3E-09 5.1E-14 114.4 14.8 169 35-235 218-390 (396)
169 PRK12307 putative sialic acid 99.0 7.7E-09 1.7E-13 111.3 18.8 146 48-224 247-392 (426)
170 TIGR00900 2A0121 H+ Antiporter 99.0 4.2E-09 9.2E-14 110.0 16.3 154 33-217 211-365 (365)
171 TIGR00792 gph sugar (Glycoside 99.0 1.9E-09 4E-14 116.5 13.9 163 32-219 222-384 (437)
172 TIGR00896 CynX cyanate transpo 99.0 5E-09 1.1E-13 110.0 16.6 153 33-217 198-350 (355)
173 TIGR02332 HpaX 4-hydroxyphenyl 99.0 4.4E-09 9.5E-14 113.1 16.2 164 33-228 243-409 (412)
174 TIGR02718 sider_RhtX_FptX side 99.0 1E-08 2.2E-13 109.2 18.5 175 34-234 210-385 (390)
175 PLN00028 nitrate transmembrane 99.0 6.7E-09 1.4E-13 113.8 17.2 172 35-240 255-433 (476)
176 PF13347 MFS_2: MFS/sugar tran 99.0 6E-09 1.3E-13 112.5 15.8 164 32-219 225-388 (428)
177 PRK15402 multidrug efflux syst 99.0 2.8E-08 6E-13 106.4 20.7 173 34-234 217-389 (406)
178 TIGR00895 2A0115 benzoate tran 99.0 3.8E-09 8.3E-14 111.7 13.7 146 34-212 252-397 (398)
179 PRK10077 xylE D-xylose transpo 99.0 2.3E-08 5E-13 109.3 19.9 158 57-242 295-459 (479)
180 TIGR00711 efflux_EmrB drug res 99.0 6.7E-09 1.5E-13 113.6 15.4 157 32-216 255-411 (485)
181 TIGR00894 2A0114euk Na(+)-depe 99.0 2.2E-08 4.9E-13 109.2 19.4 177 32-238 261-448 (465)
182 PRK10091 MFS transport protein 99.0 1.9E-08 4.1E-13 106.9 18.1 165 41-237 208-373 (382)
183 KOG3762 Predicted transporter 99.0 1.1E-07 2.5E-12 100.7 23.0 118 414-569 436-554 (618)
184 PRK11902 ampG muropeptide tran 99.0 2.8E-08 6.1E-13 106.3 18.9 155 53-239 230-389 (402)
185 PF05977 MFS_3: Transmembrane 99.0 2.6E-08 5.6E-13 109.6 18.3 172 34-237 220-391 (524)
186 TIGR00710 efflux_Bcr_CflA drug 98.9 1.4E-08 3.1E-13 107.3 15.7 158 38-224 212-370 (385)
187 PRK14995 methyl viologen resis 98.9 1.7E-08 3.6E-13 111.2 15.8 154 32-214 259-412 (495)
188 PRK10054 putative transporter; 98.9 1.5E-08 3.3E-13 108.2 14.8 173 33-237 207-381 (395)
189 TIGR00887 2A0109 phosphate:H+ 98.9 2.4E-08 5.1E-13 110.2 16.7 173 40-242 296-490 (502)
190 PRK10133 L-fucose transporter; 98.9 4.4E-08 9.6E-13 106.1 18.0 162 36-232 262-425 (438)
191 PF05631 DUF791: Protein of un 98.9 6E-07 1.3E-11 91.9 24.8 156 59-242 60-218 (354)
192 PRK09848 glucuronide transport 98.9 1.6E-08 3.5E-13 109.9 14.3 164 32-218 228-391 (448)
193 PRK15034 nitrate/nitrite trans 98.9 8.4E-08 1.8E-12 103.3 19.3 187 33-240 253-454 (462)
194 COG2270 Permeases of the major 98.9 2.5E-08 5.3E-13 103.3 14.4 175 32-238 252-427 (438)
195 PRK08633 2-acyl-glycerophospho 98.9 3.4E-08 7.4E-13 119.9 18.1 163 34-228 234-398 (1146)
196 PRK10213 nepI ribonucleoside t 98.9 1.1E-07 2.4E-12 101.5 19.6 166 34-232 218-383 (394)
197 PRK10429 melibiose:sodium symp 98.8 4E-08 8.6E-13 107.6 15.1 166 32-218 231-396 (473)
198 COG2807 CynX Cyanate permease 98.8 1.8E-07 3.8E-12 95.1 18.0 170 32-233 208-378 (395)
199 PRK11646 multidrug resistance 98.8 6.6E-08 1.4E-12 103.5 15.8 153 51-235 227-383 (400)
200 PRK06814 acylglycerophosphoeth 98.8 5.3E-08 1.2E-12 118.2 16.8 185 32-228 225-410 (1140)
201 TIGR00903 2A0129 major facilit 98.8 2E-07 4.3E-12 98.6 17.8 167 32-237 192-362 (368)
202 PRK11195 lysophospholipid tran 98.8 2.9E-07 6.2E-12 98.3 19.0 159 45-236 218-376 (393)
203 TIGR00901 2A0125 AmpG-related 98.8 9.5E-08 2.1E-12 100.3 13.7 145 33-199 210-355 (356)
204 PF03825 Nuc_H_symport: Nucleo 98.7 3.2E-07 6.9E-12 97.9 17.4 179 34-239 209-394 (400)
205 PRK09669 putative symporter Ya 98.7 1.3E-07 2.8E-12 102.6 14.2 158 37-218 234-391 (444)
206 PF07690 MFS_1: Major Facilita 98.7 3.2E-08 6.9E-13 102.9 9.1 141 37-206 211-352 (352)
207 KOG2504 Monocarboxylate transp 98.7 8.3E-08 1.8E-12 105.1 12.4 176 32-240 298-476 (509)
208 TIGR00898 2A0119 cation transp 98.7 1.6E-07 3.4E-12 103.6 14.5 142 61-237 351-492 (505)
209 KOG0569 Permease of the major 98.7 3.2E-07 7E-12 98.7 15.9 190 32-246 269-460 (485)
210 KOG2532 Permease of the major 98.7 1.7E-07 3.7E-12 101.5 13.9 177 32-239 258-446 (466)
211 PRK11102 bicyclomycin/multidru 98.7 3.6E-07 7.7E-12 96.5 15.7 143 39-210 201-344 (377)
212 KOG0253 Synaptic vesicle trans 98.7 4.2E-07 9.1E-12 92.1 14.0 146 32-209 326-490 (528)
213 PRK10473 multidrug efflux syst 98.6 6.3E-07 1.4E-11 95.4 16.1 69 50-119 221-289 (392)
214 TIGR00885 fucP L-fucose:H+ sym 98.6 6E-07 1.3E-11 96.4 16.0 162 34-230 234-402 (410)
215 PRK11043 putative transporter; 98.6 2.6E-06 5.6E-11 91.0 20.0 150 43-221 214-363 (401)
216 COG2211 MelB Na+/melibiose sym 98.6 3.7E-07 8E-12 97.4 11.7 158 37-217 241-398 (467)
217 KOG4332 Predicted sugar transp 98.5 7.6E-06 1.6E-10 79.6 18.8 155 56-238 60-218 (454)
218 KOG3098 Uncharacterized conser 98.5 0.00014 3.1E-09 77.8 29.5 108 66-206 48-155 (461)
219 TIGR00880 2_A_01_02 Multidrug 98.5 5.4E-06 1.2E-10 73.4 15.3 130 383-561 8-137 (141)
220 PF01306 LacY_symp: LacY proto 98.5 2.8E-06 6E-11 89.7 14.5 179 32-242 220-402 (412)
221 KOG1330 Sugar transporter/spin 98.5 9.1E-08 2E-12 100.0 3.1 145 376-568 71-215 (493)
222 TIGR00886 2A0108 nitrite extru 98.4 2.5E-06 5.4E-11 89.6 12.9 140 34-202 227-366 (366)
223 PRK11652 emrD multidrug resist 98.4 2.4E-05 5.3E-10 83.2 19.1 139 52-220 227-365 (394)
224 TIGR00924 yjdL_sub1_fam amino 98.3 9.7E-06 2.1E-10 88.9 16.0 187 34-242 274-470 (475)
225 PRK11462 putative transporter; 98.3 1.6E-05 3.5E-10 86.7 17.4 155 40-218 236-390 (460)
226 KOG3764 Vesicular amine transp 98.3 5.3E-06 1.1E-10 85.3 11.1 119 411-567 133-252 (464)
227 COG0738 FucP Fucose permease [ 98.3 1.8E-05 3.9E-10 81.9 14.8 158 32-224 236-393 (422)
228 PF06813 Nodulin-like: Nodulin 98.2 9.2E-05 2E-09 73.3 18.2 145 31-204 2-146 (250)
229 PRK15403 multidrug efflux syst 98.2 5.3E-05 1.1E-09 81.5 17.8 169 32-230 218-387 (413)
230 COG0477 ProP Permeases of the 98.2 5.6E-05 1.2E-09 75.5 16.9 147 53-229 23-174 (338)
231 PF03209 PUCC: PUCC protein; 98.2 3.2E-05 6.9E-10 80.6 15.1 172 38-237 214-395 (403)
232 PF02487 CLN3: CLN3 protein; 98.2 0.0041 8.8E-08 65.7 30.4 61 458-518 334-394 (402)
233 PF01770 Folate_carrier: Reduc 98.0 0.0023 5E-08 67.6 25.4 156 51-239 22-181 (412)
234 KOG2533 Permease of the major 98.0 2.5E-05 5.5E-10 85.1 11.2 165 32-226 273-442 (495)
235 PRK09584 tppB putative tripept 98.0 0.00019 4.1E-09 79.2 16.2 150 70-242 318-481 (500)
236 PF00083 Sugar_tr: Sugar (and 98.0 7.8E-08 1.7E-12 104.4 -10.5 186 34-245 254-441 (451)
237 PRK10207 dipeptide/tripeptide 97.9 0.00021 4.5E-09 78.6 16.2 180 41-243 278-479 (489)
238 KOG3762 Predicted transporter 97.9 3.2E-05 6.9E-10 82.5 8.8 168 41-241 380-548 (618)
239 TIGR01301 GPH_sucrose GPH fami 97.9 0.00022 4.8E-09 77.6 15.7 205 28-242 254-473 (477)
240 TIGR00788 fbt folate/biopterin 97.9 3.7E-05 8E-10 84.1 9.1 145 60-226 280-429 (468)
241 PF12832 MFS_1_like: MFS_1 lik 97.9 9.4E-05 2E-09 59.2 8.9 67 40-108 8-74 (77)
242 KOG0254 Predicted transporter 97.8 0.00044 9.6E-09 76.6 16.6 195 29-243 291-486 (513)
243 TIGR00769 AAA ADP/ATP carrier 97.8 0.027 5.8E-07 61.2 28.0 173 27-213 2-189 (472)
244 PRK15462 dipeptide/tripeptide 97.7 0.00045 9.7E-09 75.5 14.2 118 400-561 68-188 (493)
245 TIGR00806 rfc RFC reduced fola 97.7 0.0017 3.8E-08 69.6 17.8 90 400-519 85-174 (511)
246 PF06963 FPN1: Ferroportin1 (F 97.7 0.1 2.2E-06 56.1 30.6 190 33-238 3-198 (432)
247 TIGR00805 oat sodium-independe 97.6 0.00047 1E-08 78.2 12.3 63 459-521 172-234 (633)
248 KOG0637 Sucrose transporter an 97.6 7.6E-05 1.6E-09 78.3 4.8 166 32-212 32-202 (498)
249 KOG0252 Inorganic phosphate tr 97.5 0.0002 4.4E-09 75.2 6.8 178 32-238 304-496 (538)
250 PTZ00207 hypothetical protein; 97.5 0.0024 5.1E-08 71.2 15.1 125 398-563 82-206 (591)
251 KOG2615 Permease of the major 97.4 0.00063 1.4E-08 70.0 8.9 110 377-520 72-181 (451)
252 KOG3574 Acetyl-CoA transporter 97.4 0.074 1.6E-06 55.0 23.2 62 461-522 371-432 (510)
253 PF06609 TRI12: Fungal trichot 97.3 0.0034 7.5E-08 69.7 14.1 136 377-562 82-217 (599)
254 PF05978 UNC-93: Ion channel r 97.2 0.0089 1.9E-07 54.8 13.6 113 64-209 33-145 (156)
255 PF06779 DUF1228: Protein of u 96.9 0.008 1.7E-07 48.8 9.0 65 55-120 14-78 (85)
256 KOG2816 Predicted transporter 96.9 0.0053 1.2E-07 66.6 10.4 127 54-213 263-390 (463)
257 KOG2563 Permease of the major 96.8 0.0052 1.1E-07 64.8 9.2 157 62-245 295-455 (480)
258 KOG0255 Synaptic vesicle trans 96.8 0.017 3.6E-07 64.1 14.0 114 396-557 137-250 (521)
259 PRK03612 spermidine synthase; 96.8 0.073 1.6E-06 58.9 18.2 161 39-227 21-184 (521)
260 KOG2325 Predicted transporter/ 96.7 0.05 1.1E-06 58.8 16.2 147 398-568 88-235 (488)
261 PF00854 PTR2: POT family; In 96.6 0.015 3.2E-07 61.6 10.9 125 415-568 2-129 (372)
262 TIGR00926 2A1704 Peptide:H+ sy 95.5 0.3 6.5E-06 55.5 15.2 133 412-567 52-187 (654)
263 PF06813 Nodulin-like: Nodulin 95.3 0.44 9.4E-06 47.4 14.0 92 411-518 63-154 (250)
264 PF03137 OATP: Organic Anion T 95.3 0.0031 6.7E-08 70.0 -1.6 63 459-521 141-203 (539)
265 KOG3626 Organic anion transpor 95.2 0.14 3E-06 58.0 11.1 100 461-566 239-347 (735)
266 COG3104 PTR2 Dipeptide/tripept 94.7 0.42 9.1E-06 51.5 12.6 167 53-241 305-488 (498)
267 TIGR00939 2a57 Equilibrative N 94.6 8 0.00017 41.9 28.9 58 458-515 371-428 (437)
268 PF03092 BT1: BT1 family; Int 94.6 0.45 9.7E-06 51.5 13.0 116 415-564 60-177 (433)
269 PF06963 FPN1: Ferroportin1 (F 93.8 2.4 5.2E-05 45.7 16.2 137 51-210 277-413 (432)
270 PF05978 UNC-93: Ion channel r 93.4 1.8 3.9E-05 39.7 12.6 61 458-518 88-148 (156)
271 PF03219 TLC: TLC ATP/ADP tran 93.4 13 0.00027 40.9 21.1 167 26-214 18-205 (491)
272 PF01770 Folate_carrier: Reduc 92.4 6.4 0.00014 42.0 16.5 62 458-520 93-154 (412)
273 KOG3098 Uncharacterized conser 92.2 4.4 9.5E-05 43.9 15.3 116 77-208 288-407 (461)
274 KOG0637 Sucrose transporter an 92.0 0.96 2.1E-05 48.3 9.7 130 375-516 69-200 (498)
275 PF13000 Acatn: Acetyl-coenzym 91.9 22 0.00048 38.8 25.4 63 461-523 407-469 (544)
276 KOG4332 Predicted sugar transp 90.7 2.5 5.5E-05 42.0 10.5 174 34-235 251-426 (454)
277 PF05631 DUF791: Protein of un 90.4 15 0.00033 38.3 16.5 89 458-560 120-214 (354)
278 PF02487 CLN3: CLN3 protein; 90.3 3.6 7.7E-05 43.8 12.1 81 411-518 86-166 (402)
279 KOG3880 Predicted small molecu 89.1 29 0.00062 35.6 18.1 58 458-515 341-398 (409)
280 KOG1479 Nucleoside transporter 88.4 38 0.00082 36.0 27.7 57 458-514 342-398 (406)
281 TIGR00769 AAA ADP/ATP carrier 88.3 44 0.00094 36.6 19.3 61 460-520 129-190 (472)
282 KOG3097 Predicted membrane pro 83.7 13 0.00029 38.2 11.2 117 28-177 25-141 (390)
283 TIGR00939 2a57 Equilibrative N 83.5 29 0.00062 37.6 14.7 90 459-561 106-195 (437)
284 COG0477 ProP Permeases of the 76.3 76 0.0016 30.6 15.2 63 458-520 93-157 (338)
285 PF07672 MFS_Mycoplasma: Mycop 75.5 92 0.002 31.1 16.8 58 187-244 4-66 (267)
286 PF13000 Acatn: Acetyl-coenzym 75.4 48 0.0011 36.3 12.8 33 481-513 140-172 (544)
287 PRK03612 spermidine synthase; 70.8 79 0.0017 35.1 13.8 53 467-520 118-170 (521)
288 COG3202 ATP/ADP translocase [E 69.5 1.8E+02 0.0039 31.9 27.8 168 26-215 21-210 (509)
289 KOG3810 Micronutrient transpor 66.6 87 0.0019 32.8 11.7 96 457-562 324-421 (433)
290 KOG2601 Iron transporter [Inor 65.4 1.9E+02 0.0041 30.7 16.5 55 458-512 385-439 (503)
291 KOG1237 H+/oligopeptide sympor 60.7 33 0.00072 38.5 8.4 138 415-568 105-251 (571)
292 COG5336 Uncharacterized protei 60.2 1.1E+02 0.0023 26.0 9.2 34 489-522 36-69 (116)
293 COG5336 Uncharacterized protei 55.8 36 0.00078 28.8 5.6 38 75-112 49-86 (116)
294 PF07857 DUF1632: CEO family ( 53.0 99 0.0021 30.8 9.4 26 491-516 75-100 (254)
295 KOG3574 Acetyl-CoA transporter 51.6 67 0.0014 34.1 8.1 95 465-563 139-237 (510)
296 PF09527 ATPase_gene1: Putativ 48.0 93 0.002 22.7 6.4 37 75-111 7-43 (55)
297 KOG1479 Nucleoside transporter 43.7 2.3E+02 0.0049 30.3 10.8 116 46-179 257-376 (406)
298 PF03219 TLC: TLC ATP/ADP tran 42.5 5E+02 0.011 28.6 19.8 43 478-520 163-205 (491)
299 KOG3810 Micronutrient transpor 34.9 1.5E+02 0.0032 31.2 7.4 84 71-177 274-357 (433)
300 PF01102 Glycophorin_A: Glycop 33.6 48 0.001 28.9 3.3 24 543-566 70-93 (122)
301 PF11947 DUF3464: Protein of u 31.6 1.6E+02 0.0035 26.8 6.4 50 145-204 96-145 (153)
302 COG3202 ATP/ADP translocase [E 31.6 7.4E+02 0.016 27.3 15.0 98 460-563 148-246 (509)
303 PF06779 DUF1228: Protein of u 29.9 2.4E+02 0.0053 22.9 6.6 69 157-235 5-73 (85)
304 TIGR02230 ATPase_gene1 F0F1-AT 28.5 1.8E+02 0.0039 24.4 5.8 28 80-107 54-81 (100)
305 PF01733 Nucleoside_tran: Nucl 26.2 21 0.00045 36.6 -0.2 55 145-206 247-301 (309)
306 PF06781 UPF0233: Uncharacteri 24.6 3.9E+02 0.0085 21.8 7.2 29 29-62 28-56 (87)
307 TIGR01667 YCCS_YHJK integral m 22.9 9.1E+02 0.02 28.0 12.1 53 87-162 42-97 (701)
308 PF06645 SPC12: Microsomal sig 20.8 2.2E+02 0.0047 22.6 4.7 41 193-236 12-52 (76)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=9.1e-45 Score=396.32 Aligned_cols=532 Identities=43% Similarity=0.741 Sum_probs=471.3
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHH
Q 007637 27 EGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGS 106 (595)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 106 (595)
++..|+.+.+++..+.+|+.++|++..++..|+++.+|.+...+.-..+.+.....+.++++++++|.++||-+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCcc--ccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchh
Q 007637 107 FSSLLGTTTLWSTAMIPQLKPAPCNQL--VSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNK 184 (595)
Q Consensus 107 ~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 184 (595)
++..+|..++.++.+.+.+.+++| .. ....|...+..+...++.++-+.++|.|+..|+..++.+|++++.++.++
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~-~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~- 189 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMC-KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEV- 189 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccc-cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchh-
Confidence 999999999999888999999988 22 23457777777888999999999999999999999999999996555444
Q ss_pred hhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHH
Q 007637 185 RVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASL 264 (595)
Q Consensus 185 ~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (595)
+.+.+.++|+|+..++|..++..+..++.+..||.+.|.+..++..++.++++...+.++.+.+.+++++.+.+++..+.
T Consensus 190 ~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~ 269 (571)
T KOG1237|consen 190 KGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAA 269 (571)
T ss_pred hCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHH
Confidence 55679999999999999999999999999999999999999999999999999988888888888999999999999999
Q ss_pred hhccccCCCCCccc-cccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhh
Q 007637 265 RKISLYPSSNTVNY-YHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTG 343 (595)
Q Consensus 265 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 343 (595)
++++...+.++... ...........++..+++|++.+..+++. ..+....+|++|+.+++|+.|..++.+++|...
T Consensus 270 ~k~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~---~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~ 346 (571)
T KOG1237|consen 270 FKRKAVVSLDPEELYYDCTDSVAIEGTKPFRFLDKAALKTSDDL---KDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTT 346 (571)
T ss_pred HHHhccCCCcchhccccccccccccCCcccchhhHhhccCCccc---ccccccCCccCCCceehhhhhhhhhhhHHHHHH
Confidence 99887766553322 11111122334577899999888655433 356677899999999999999999999999999
Q ss_pred Hhhhhhccc-cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHH
Q 007637 344 IIILLSLNQ-QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLL 422 (595)
Q Consensus 344 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 422 (595)
+++++.+.| .++++.|...++++.+++|.+|++....+..+...+..|+++++..|+.+|.++++.|+++..++.+|+.
T Consensus 347 i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~ 426 (571)
T KOG1237|consen 347 IIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLV 426 (571)
T ss_pred HHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccch
Confidence 999999999 8888999999999998679999999999999999999999999999999999987767999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHH
Q 007637 423 LSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTL 502 (595)
Q Consensus 423 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~ 502 (595)
+..+++...+..+.+|++.... ....+.++|++|++++|+++|++|.+..++..++.++++|++||+.+++++.+
T Consensus 427 ~si~sm~~aa~vE~krl~~~~~-----~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~ 501 (571)
T KOG1237|consen 427 LSILSMAVAGIVEAKRLKTAVS-----LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLL 501 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhhhh-----ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHH
Confidence 9999999999999888887755 12223568999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCcccc-cCCCCchhhHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 007637 503 GMAVANLLGGLLVKIVDRVTRKHGKESWLS-SNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPSVD 570 (595)
Q Consensus 503 ~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~~~~~ 570 (595)
..++|+.++..++..+...+++ ..+|+. ++.|.++++.+||+++....+....+..+.++++++..
T Consensus 502 t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~ 568 (571)
T KOG1237|consen 502 TVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDD 568 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeeccc
Confidence 9999999999999998877643 358998 99999999999999999999999999988888776543
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=7.1e-39 Score=333.44 Aligned_cols=455 Identities=19% Similarity=0.288 Sum_probs=350.1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcC----CchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 007637 25 KPEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYH----VEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFW 100 (595)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~----~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~ 100 (595)
+...+|+|.++.++.+|++||++||+++..+..|+..+++ ++++++..+.+.|....+..+++|||+|||++|+||
T Consensus 14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~ 93 (498)
T COG3104 14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR 93 (498)
T ss_pred cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Confidence 3345689999999999999999999999999999999888 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCC
Q 007637 101 VILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDN 180 (595)
Q Consensus 101 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~ 180 (595)
++..|.++.++|++.++.+. ..+...++++.+++.+|.|.+.|+..++++|++|++|+
T Consensus 94 tI~lGail~~iGh~~L~~~~----------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp 151 (498)
T COG3104 94 TIVLGAILMAIGHLVLAISS----------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP 151 (498)
T ss_pred HHHHHHHHHHHHHHHHhccc----------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc
Confidence 99999999999999988642 01456789999999999999999999999999999885
Q ss_pred cchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCC--CCCh------
Q 007637 181 PKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQP--DKSL------ 252 (595)
Q Consensus 181 ~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------ 252 (595)
| |..+++++|.+.|+|+.++|++.+++.+.+||+..|..+++.+.++++.+++++++...... +..+
T Consensus 152 ----r-rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~ 226 (498)
T COG3104 152 ----R-RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFL 226 (498)
T ss_pred ----c-cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhh
Confidence 3 89999999999999999999999999999999999999999999999999888876544321 1111
Q ss_pred hHHHHHHHHHHHhhc-cccCCCCCccccccCCCCccCCCCchhh-hhhhhc------ccCCCCCCCCCCCCCCCCccccc
Q 007637 253 FTSFIQVIVASLRKI-SLYPSSNTVNYYHAKDSNYVTPTDNLRF-LNKACM------IENPEEDLNPDGTASNPWKLCSI 324 (595)
Q Consensus 253 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 324 (595)
.......+....... .... . . +..+. +....+ ..+ ...++ .
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l--------~--------~-~~~~~~~~~~~i~~~~~~~~~-----------~~~~~---~ 275 (498)
T COG3104 227 LPVLGGLVVMILAALLTLLL--------N--------Q-NTFSGVLLVISILIAIIYFAE-----------AFRSP---K 275 (498)
T ss_pred hhhHHHHHHHHHHHHHHHHH--------H--------H-HHHHHHHHHHHHHHHHHHHHH-----------HhccC---c
Confidence 111111111111110 0000 0 0 00000 000000 000 00011 1
Q ss_pred hhhhhhhHHHhHHhhhhhhHhhhhhccc--cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhc
Q 007637 325 GQVESLKALLRITPMCSTGIIILLSLNQ--QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILV 402 (595)
Q Consensus 325 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 402 (595)
.+ +++|+++..+++++...+||+.+.| +++..+.....+++.. ++.+++++++++|++.++++.|++.++..++.+
T Consensus 276 ~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~-g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~ 353 (498)
T COG3104 276 VF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF-GFEVPPAWFQSLNPFFIILFSPILAALWTKLGR 353 (498)
T ss_pred cH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccc-ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhc
Confidence 12 6778888999999999999999999 6666666777777744 489999999999999999999998888666555
Q ss_pred cccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHH
Q 007637 403 KFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIE 482 (595)
Q Consensus 403 ~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~ 482 (595)
+. |. ++...++.+|+.+++.+++.+.....+ .++++ ...|.+|+++.|+++++||.+..|...+
T Consensus 354 ~~--~~--ps~~~KFalGl~l~g~~fl~l~~~~~~---~~~~~---------~~~s~~~lil~y~l~s~gEL~iSpvGLs 417 (498)
T COG3104 354 GN--KQ--PSTPIKFALGLILAGLGFLILLLAGIW---FGGPS---------GLVSVWWLVLSYVLQSFGELFISPVGLS 417 (498)
T ss_pred CC--CC--CCcchHHHHHHHHHHHHHHHHHHHHHh---hcCCC---------CCcCHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 53 33 888899999999999999888776421 11111 2369999999999999999999999999
Q ss_pred HHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 007637 483 FYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCC 562 (595)
Q Consensus 483 ~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~ 562 (595)
++.+.+|+.+.+.+||+|.+.+..|+.+++.+.+...... +..+......+|+..+..+++..+......
T Consensus 418 ~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~----------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~ 487 (498)
T COG3104 418 MVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTD----------PAYTAFIEGRVFGTIGVVAIVIGILLLLLS 487 (498)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccc----------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999998877422100 000112234578888888888777766665
Q ss_pred hcc
Q 007637 563 WAY 565 (595)
Q Consensus 563 ~~~ 565 (595)
++.
T Consensus 488 ~~~ 490 (498)
T COG3104 488 PKL 490 (498)
T ss_pred HHH
Confidence 443
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=9.9e-36 Score=324.90 Aligned_cols=457 Identities=14% Similarity=0.219 Sum_probs=324.8
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHH
Q 007637 27 EGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGS 106 (595)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 106 (595)
.++|+|.++.++..+++|++++|++.++++.|+++++|++.++++++.+.+....++.++++|+++||++||||+++++.
T Consensus 9 ~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~ 88 (489)
T PRK10207 9 LLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA 88 (489)
T ss_pred hhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999449999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhh
Q 007637 107 FSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRV 186 (595)
Q Consensus 107 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (595)
+++.+++++++++.+ ....++++|+++++|.|...|+..++++|++|+++ ++
T Consensus 89 ~~~~~g~~~~~~~~~-----------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~-----~~ 140 (489)
T PRK10207 89 IVLAIGYFMTGMSLL-----------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKD-----PR 140 (489)
T ss_pred HHHHHHHHHHHHhcc-----------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCc-----hh
Confidence 999999998887541 12345688999999999999999999999999866 23
Q ss_pred HhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcccccc--CCCCChh--HHHH----H
Q 007637 187 LETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKV--QPDKSLF--TSFI----Q 258 (595)
Q Consensus 187 r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~----~ 258 (595)
|++.++++|++.|+|..++|.+++++.++.|||+.|++..+..+++++.+...++..++. ++++++. .... .
T Consensus 141 ~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~ 220 (489)
T PRK10207 141 LDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLG 220 (489)
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHH
Confidence 688999999999999999999999999999999999997766665555555544333222 1211111 1100 0
Q ss_pred HHHHHHhhccccCCCCCccccccCCCCccCCCCchhhh---hh--hhcccCCCCCCCCCCCCCCCCccccchhhhhhhHH
Q 007637 259 VIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFL---NK--ACMIENPEEDLNPDGTASNPWKLCSIGQVESLKAL 333 (595)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (595)
.+.....-........ ........ .. ....++. ..+++++ ++.
T Consensus 221 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~i~~~~f~~~~~-----------------~~~~~~r-~r~ 268 (489)
T PRK10207 221 SVVMIFVCAWLMHNVE--------------VANLVLIVLSIVVTIIFFREAF-----------------KLDKTGR-NKM 268 (489)
T ss_pred HHHHHHHHHHHHhhhh--------------HHHHHHHHHHHHHHHHHHHHHh-----------------cCCHHHH-HHH
Confidence 0000000000000000 00000000 00 0000000 0112233 334
Q ss_pred HhHHhhhhhhHhhhhhccc--cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCC
Q 007637 334 LRITPMCSTGIIILLSLNQ--QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGL 411 (595)
Q Consensus 334 l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (595)
+..+.++...+++|..+.| ..+..+.....+.... ++.++++.++++|++..++..|+.+.+ .+|+++|+..+
T Consensus 269 ~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~-G~~i~~~~~~~~n~~~iii~~pl~~~l----~~rl~~r~~~~ 343 (489)
T PRK10207 269 FVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEIL-GFSINPVSFQALNPFWVVVASPILAGI----YTHLGSKGKDL 343 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcccccc-ceEECHHHHHhHhHHHHHHHHHHHHHH----HHHHhhCCCCC
Confidence 4556666667888888888 3433333334444443 567788899999999998999987654 55555554337
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcc
Q 007637 412 SPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKS 491 (595)
Q Consensus 412 ~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~ 491 (595)
++..++.+|+++.++++.+++..... ..+.+ ...+.||+++.+++.++||.+..|+.++++.+.+|++
T Consensus 344 ~~~~k~~~G~~l~~~~~~~~~~~~~~---------~~~~~---~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~ 411 (489)
T PRK10207 344 SMPMKFTLGMFLCSLGFLTAAAAGMW---------FADAQ---GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQH 411 (489)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHh---------hcCCC---CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHH
Confidence 88889999999999888766543200 00000 1257899999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCC-CCchhhHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007637 492 MSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNL-NKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGP 567 (595)
Q Consensus 492 ~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~-~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~~ 567 (595)
++|.++|++++..++|+.+|..+.+.+..... .. +.. ..+.+.++|...++.++++.++++++.+..++
T Consensus 412 ~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~-----~~--~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~ 481 (489)
T PRK10207 412 LMGFILGMWFLTQAAAFLLGGYVATFTAVPDN-----IT--DPLETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNR 481 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----cc--cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999876642110 00 000 12346889999999999888888887765544
No 4
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=7.2e-35 Score=314.13 Aligned_cols=449 Identities=18% Similarity=0.258 Sum_probs=321.8
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF 107 (595)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 107 (595)
.+|+|.++.++..+++|++++|++..+++.|+++++|+++.+++.+.+.+.....++++++|+++||++||||+++++.+
T Consensus 5 ~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~i 84 (493)
T PRK15462 5 ASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGAL 84 (493)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999996699999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
+..++..++.... .+...++++..+..+|.|...++..++++|++|+++ ++|
T Consensus 85 l~~lg~lll~~~~-----------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~-----~~R 136 (493)
T PRK15462 85 LMAIGHVVLGASE-----------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTD-----PRR 136 (493)
T ss_pred HHHHHHHHHHHhh-----------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCC-----ccc
Confidence 9999887665321 012234555666778888889999999999999865 238
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcccccc---CCCCChhHHHH----HHH
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKV---QPDKSLFTSFI----QVI 260 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~ 260 (595)
+++++++|...|+|+.++|.+.+++.+++||++.|.++++..+++++.+++..+...+. ++++.+.++.. ..+
T Consensus 137 ~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 216 (493)
T PRK15462 137 DGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWL 216 (493)
T ss_pred cceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999998877777777666655443221 11111000100 000
Q ss_pred HH------HHhhccccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHH
Q 007637 261 VA------SLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALL 334 (595)
Q Consensus 261 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 334 (595)
.. .+.................. . ....++ ..+... ....+++|++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~--~~~~~~-------------------~~~~~er~r~~ 268 (493)
T PRK15462 217 LVLLVATPALITVLFWKEWSVYALIVAT----I---IGLGVL--AKIYRK-------------------AENQKQRKELG 268 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----H---HHHHHH--HHHHHh-------------------cCCHHHHhhHH
Confidence 00 00000000000000000000 0 000000 000000 01124567777
Q ss_pred hHHhhhhhhHhhhhhccc--cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCC
Q 007637 335 RITPMCSTGIIILLSLNQ--QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLS 412 (595)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (595)
...++++..++||..|+| +++.++...+.|+++. ++.+|+++++++|++.++++.|+..++ +.|+.++++.++
T Consensus 269 ~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~-g~~ip~~~~qslNp~~ii~l~P~~a~l----w~~l~~~~~~~s 343 (493)
T PRK15462 269 LIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMF-GYTVPTAMFQSINAFAVMLCGVFLAWV----VKESVAGNRTVR 343 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhc-ceeeCHHHHHhHhHHHHHHHHHHHHHH----HHHHhcCCCCCC
Confidence 888888999999999999 7777778888888876 789999999999999999999987665 555533322378
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcch
Q 007637 413 PKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSM 492 (595)
Q Consensus 413 ~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~ 492 (595)
...++.+|++++++++.++.+.... ...+| ..+.+|++..+++.++||.+..|...+++.+.+|++.
T Consensus 344 ~~~Kfa~g~~~~g~~f~~l~~~~~~----~~~~~---------~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~ 410 (493)
T PRK15462 344 IWGKFALGLGLMSAGFCILTLSARW----SAMYG---------HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGV 410 (493)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhh----cCCCC---------CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHH
Confidence 8899999999999999888765411 01111 2688999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHH
Q 007637 493 SSMAMAIFTLGM-AVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVN 554 (595)
Q Consensus 493 rg~~~gl~~~~~-~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~ 554 (595)
+|+.||++++.. .+|+.+++.+.+........ +-.....+..++..+|...+..+++.
T Consensus 411 ~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 411 TGVLTGIYMLLSGAIANYLAGVIADQTSQASFD----ASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC----ccccccchhhhHHHHHHHHHHHHHHH
Confidence 999999998754 78888888887765321000 00000001235677888888877766
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=5.9e-35 Score=318.38 Aligned_cols=451 Identities=14% Similarity=0.205 Sum_probs=326.8
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhh--cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHH
Q 007637 28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNG--YHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLG 105 (595)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~ 105 (595)
.+++|.++.+.+.+++|++++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++||++||||++.++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 45778888999999999999999999999999987 9999999999999999999999999999999944999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhh
Q 007637 106 SFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKR 185 (595)
Q Consensus 106 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 185 (595)
.++.++++.+++++. +...+++++++.|+|.|...|+..++++|++|+++. +
T Consensus 86 ~~~~~~g~~~~~~~~------------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~----~ 137 (475)
T TIGR00924 86 GIVLMLGHFMLAMSI------------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM----P 137 (475)
T ss_pred HHHHHHHHHHHHhcc------------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc----c
Confidence 999999988877644 456678899999999999999999999999998654 2
Q ss_pred hHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhH----HH-HH--
Q 007637 186 VLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFT----SF-IQ-- 258 (595)
Q Consensus 186 ~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~-- 258 (595)
.|+++++++|.+.|+|..+||.+++++.++.||++.|++.++..+++.+.+++..+.+++.++++++.+ +. .+
T Consensus 138 ~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (475)
T TIGR00924 138 RRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLL 217 (475)
T ss_pred cccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHH
Confidence 378899999999999999999999999999999999999887666666665555544332221111100 00 00
Q ss_pred ----HHHHHHhhccccCCCCCccccccCCCCccCCCC-chhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHH
Q 007637 259 ----VIVASLRKISLYPSSNTVNYYHAKDSNYVTPTD-NLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKAL 333 (595)
Q Consensus 259 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (595)
.+........... .. .. .+...... ...+........+ + ..++.++ ++.
T Consensus 218 ~~~~~~~~~~~~~~~~~-~~---~~----~~~~~~~~~~~~~~~~~~~~~~-------------~----~~~~~~~-~~~ 271 (475)
T TIGR00924 218 ALLAALALVFFCAWLMH-HV---VI----ANILLMTVTLAVIIFFFRLAFK-------------P----RLDAVAR-NKM 271 (475)
T ss_pred HHHHHHHHHHHHHHHHh-cc---HH----HHHHHHHHHHHHHHHHHHHHHh-------------c----cCCHHHH-hHH
Confidence 0000000000000 00 00 00000000 0000000000000 0 0112222 334
Q ss_pred HhHHhhhhhhHhhhhhccc--cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCC
Q 007637 334 LRITPMCSTGIIILLSLNQ--QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGL 411 (595)
Q Consensus 334 l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (595)
...+++++..+++|..+.| +++..++...++.+.+ ++.+|++.+.++|++.+++++|+.+.+ +.++.+|..++
T Consensus 272 ~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~-~~~ip~~~~~~~n~~~iil~~p~~~~~----~~~l~~~~~~~ 346 (475)
T TIGR00924 272 YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEML-GMSVPVIWFQSLNPFWVVVGSPVLAMI----WTRLGRKGKDP 346 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcccccc-ceEECHHHHHhhhHHHHHHHHHHHHHH----HHHHHhCCCCC
Confidence 4577888888899999988 5566666666676654 678999999999999999999997754 34444332225
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcc
Q 007637 412 SPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKS 491 (595)
Q Consensus 412 ~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~ 491 (595)
+...++.+|+++.++++..+++.... .++ ..+.++||+++.+++.++||.+..|..++++++.+|++
T Consensus 347 ~~~~k~~~G~~l~~~~~~~~~~~~~~----------~~~---~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~ 413 (475)
T TIGR00924 347 TTPLKFTLGMLFCGASFLTFAASIWF----------ADA---GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQR 413 (475)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhh----------cCC---CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHH
Confidence 66678899999999999888765310 000 12369999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhccc
Q 007637 492 MSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYG 566 (595)
Q Consensus 492 ~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~ 566 (595)
+||+++|++.+...+|+.+++.+.....+. .+..++|...++++++..+++++..+..+
T Consensus 414 ~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 414 LMGQMLGMWFLAQAMGSLLGGYLATFGAVP----------------QGVTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------cchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888765421 12346788888888888877777765543
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=3.9e-33 Score=305.89 Aligned_cols=454 Identities=16% Similarity=0.259 Sum_probs=319.2
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
+++|.++.++..++++++++|++.++++.|+++++|++.++++++.+.+.......++++|+++||++|||++++++.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 56677888999999999999999999999999999999999999998888777788889999999944999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
..+++.+++++. .+...++++++++++|.|...++..++++|++|+++ ++|+
T Consensus 98 ~~ig~~l~~~~~-----------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~-----~~~~ 149 (500)
T PRK09584 98 LAIGYALVAWSG-----------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD-----PRLD 149 (500)
T ss_pred HHHHHHHHHHhc-----------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc-----hhhh
Confidence 999988877643 124556788999999999999999999999998754 2356
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcccccc--CCCCChh--HHH----HHHH
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKV--QPDKSLF--TSF----IQVI 260 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~----~~~~ 260 (595)
.+++++|.+.++|..++|++++++.+++||++.|++.++..+++++.+++..+..++. ++++++. ... ....
T Consensus 150 ~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (500)
T PRK09584 150 GAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVV 229 (500)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHH
Confidence 7889999999999999999999999999999999998876666665554443332221 1111111 010 1111
Q ss_pred HHHHhhccccCCCCCccccccCCCCccCCCCchhhh--hhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHh
Q 007637 261 VASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFL--NKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITP 338 (595)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 338 (595)
......... .... .. ........ ......... .+..++ .++++.+..+.
T Consensus 230 ~~~~~~~~~-~~~~-~~-----------~~~~~~~~~~~~~~~~~~~---------------~~~~~~-~~~~~~~~~~~ 280 (500)
T PRK09584 230 ALIAIATWL-LHNQ-EI-----------ARMALGVVALGIVVIFGKE---------------AFAMKG-AARRKMIVAFI 280 (500)
T ss_pred HHHHHHHHH-Hhcc-hH-----------HHHHHHHHHHHHHHHHHHH---------------HhhcCH-HHHHHHHHHHH
Confidence 111110000 0000 00 00000000 000000000 000112 23444555566
Q ss_pred hhhhhHhhhhhccc-cceeeee-ccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHH
Q 007637 339 MCSTGIIILLSLNQ-QTFATLQ-AKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMR 416 (595)
Q Consensus 339 ~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (595)
+++..+++|..+.| .+....+ ....++... ++.++++.++++|++.+++++|+.++. ++|+++| .++..+
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~-g~~i~~~~~~s~n~i~iil~~p~~~~~----~~~l~~r---~~~~~~ 352 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSIL-GIAVEPEQYQALNPFWIMIGSPILAAI----YNKMGDR---LPMPHK 352 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhcccccc-ceEECHHHHHHHhHHHHHHHHHHHHHH----HHHhCcC---CCcHHH
Confidence 67778889999988 4442322 233444443 567889999999999999999987665 5666666 667889
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHH
Q 007637 417 MGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMA 496 (595)
Q Consensus 417 l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~ 496 (595)
+.+|++++++++..++.... .++.+ ...+.+|+++.+++.++||.+..|...+++.+.+|+++||++
T Consensus 353 ~~~G~~l~~l~f~~l~~~~~----~~~~~---------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~ 419 (500)
T PRK09584 353 FAIGMVLCSGAFLVLPLGAK----FANDA---------GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFI 419 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHH----hcCCC---------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHH
Confidence 99999999999988877541 11111 236888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCC-CCchhhHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007637 497 MAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNL-NKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGP 567 (595)
Q Consensus 497 ~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~-~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~~ 567 (595)
+|++++...+|+.+++.+.+.+.... -..+.. ..+.+.++|...++++++.++++++..+..++
T Consensus 420 ~g~~~l~~a~g~~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k 484 (500)
T PRK09584 420 MGSWFLTTAGAALIAGYVANLMAVPD-------NVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNR 484 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-------ccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888876543110 000000 11346788999998888777777776665544
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.96 E-value=3.8e-26 Score=254.50 Aligned_cols=331 Identities=27% Similarity=0.457 Sum_probs=266.1
Q ss_pred HHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 007637 46 VASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQL 125 (595)
Q Consensus 46 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~ 125 (595)
++||++.+.+..|+.+.+|++.+++..+...+.....+.++++|+++|+++||+|++.++.++..+|..++++....+..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999888775421110
Q ss_pred CCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHH
Q 007637 126 KPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLA 205 (595)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 205 (595)
........+++..+.++|.|++.|+..++.+|+++++++ +.|.++++++|+++|+|+.++
T Consensus 81 ----------------~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~----~~~~s~F~~fY~~iNiGSlis 140 (654)
T TIGR00926 81 ----------------HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL----SLRSRFFSFFYFAINAGSLIS 140 (654)
T ss_pred ----------------cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch----hHHHHHHHHHHHHHHHHHHHH
Confidence 112345577889999999999999999999999987554 458999999999999999999
Q ss_pred HHHHHHhhcc-------cchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCCCCccc
Q 007637 206 FTIIVYIQDH-------LGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNY 278 (595)
Q Consensus 206 p~~~~~l~~~-------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (595)
+++.+++.+. .+|..+|.+++++++++++++....+.+++.++.++...+..+++..+.+++......
T Consensus 141 ~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~----- 215 (654)
T TIGR00926 141 TIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE----- 215 (654)
T ss_pred HHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc-----
Confidence 9999999844 3699999999999999998888877777666666666666666666665543211100
Q ss_pred cccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccc-cceee
Q 007637 279 YHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQ-QTFAT 357 (595)
Q Consensus 279 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~ 357 (595)
....+|+|.+..... .++++++|++++++++++...++|..+.| .+...
T Consensus 216 -----------~~~~~~ld~a~~~~~-------------------~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~ 265 (654)
T TIGR00926 216 -----------HWPLHWLDYAKDKHD-------------------IRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWT 265 (654)
T ss_pred -----------ccchhHHHHhccccc-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 011345555433111 34567889999999999999999999988 55556
Q ss_pred eeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 007637 358 LQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVE 435 (595)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~ 435 (595)
.+...++..++ ++.++++.++.++++.++++.|+++..++|.++|.+.+ +++..++.+|+++.++++++.++.+
T Consensus 266 ~qa~~m~~~l~-g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ve 339 (654)
T TIGR00926 266 LQATRMDGDVG-GFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQ 339 (654)
T ss_pred HHHHHhcCccC-CEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776666654 57789999999999999999999998888888776554 7889999999999999998887764
No 8
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=4.6e-23 Score=220.04 Aligned_cols=376 Identities=12% Similarity=0.046 Sum_probs=245.4
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
+.+|.+..+....++..++.....+.++.|+.+++|+|+.+.+++.+++.++..+++++.|+++||+ ||||++..+.++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~ 90 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCG 90 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHH
Confidence 3445666677788888888888888999999999999999999999999999999999999999996 999999999988
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
.+++.+.+.++..... ....+...+++.|+++|++.+...+...+++.|.+|+++ |+
T Consensus 91 ~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~-------r~ 147 (399)
T PRK05122 91 CALSGLLYLLAGLLAA----------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH-------TG 147 (399)
T ss_pred HHHHHHHHHHhhhhhc----------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh-------hc
Confidence 8887666554321100 001146678999999999999999999999999998843 78
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhcc
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKIS 268 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (595)
++.++.....++|.+++|.+++++.+..||+..+++..+..++..+. ..+ .++.++.++..
T Consensus 148 ~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~--------------- 208 (399)
T PRK05122 148 RVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL---ARP-RPAVPPVKGER--------------- 208 (399)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH---Hhc-CCCCCCCCccc---------------
Confidence 99999888889999999999999999999999887765544332222 111 11100000000
Q ss_pred ccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHH-hhhhhhHhhh
Q 007637 269 LYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRIT-PMCSTGIIIL 347 (595)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~ 347 (595)
. ++. +..|..+... ........+.
T Consensus 209 ----------------------~--~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~ 233 (399)
T PRK05122 209 ----------------------L--PFR-------------------------------RVLGRVWPYGMGLALASIGFG 233 (399)
T ss_pred ----------------------h--hHH-------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0001111100 0000011111
Q ss_pred hhccc-cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHH
Q 007637 348 LSLNQ-QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAV 426 (595)
Q Consensus 348 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i 426 (595)
..... ..+ +.. .... ..........+..++..++.+ ++.+|.++ ++.+..+.++.++
T Consensus 234 ~~~~~~~~~--~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~g----~l~~r~~~-------~~~~~~~~~~~~~ 291 (399)
T PRK05122 234 TIATFITLY--YAA----RGWD-----GAALALTLFGVAFVGARLLFG----NLINRLGG-------LRVAIVSLLVEIL 291 (399)
T ss_pred HHHHHHHHH--HHH----cccc-----cchHHHHHHHHHHHHHHHHHH----HHHHHhcc-------HHHHHHHHHHHHH
Confidence 11000 111 111 1100 011111222233333333322 33454333 3456666666666
Q ss_pred HHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHH
Q 007637 427 SMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAV 506 (595)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~l 506 (595)
++....... +.+++++..++.|++.+..++.......+..|++.||+++|+.+....+
T Consensus 292 ~~~~~~~~~----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 349 (399)
T PRK05122 292 GLLLLWLAP----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDL 349 (399)
T ss_pred HHHHHHHhc----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 665555432 4455666778899998888888888888999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 007637 507 ANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCC 562 (595)
Q Consensus 507 g~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~ 562 (595)
|..+++.+.+.+.+.. ++++.|++.+++.+++.+..+.+.
T Consensus 350 g~~~~~~~~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 350 SLGITGPLAGLVASWF----------------GYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHHHHHHHHc----------------CHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998988877532 246678888887777766655543
No 9
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=4.5e-23 Score=220.52 Aligned_cols=371 Identities=13% Similarity=0.128 Sum_probs=244.3
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 007637 35 PFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTT 114 (595)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~ 114 (595)
+.++...++...+.+.+.++++.|+++++|+|..+.+.+.+...+...+..+++|+++||+ |||+++.++.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 5566788888999999999999999999999999999999999999999999999999996 999999999999999888
Q ss_pred HHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHH
Q 007637 115 TLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWY 194 (595)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (595)
.+.+.+ +.+.+++.|+++|++.+...|...+++.|.+|+ ++|+++.++.
T Consensus 92 ~~~~~~------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~a~~~~ 140 (400)
T PRK11646 92 TMAIAH------------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRP-------HQRGRFFSLL 140 (400)
T ss_pred HHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-------HHHHHHHHHH
Confidence 877644 577788999999999998889999999999987 4489999999
Q ss_pred HHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCCC
Q 007637 195 YASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSN 274 (595)
Q Consensus 195 ~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (595)
+...++|..+||.+++++. .+||++.|++.++..+++.+...+..++.+.+ +..++..+ .
T Consensus 141 ~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~---~--------------- 200 (400)
T PRK11646 141 MMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-TVRTPVRE---G--------------- 200 (400)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc-ccchhhHH---H---------------
Confidence 9999999999999999998 67999999988766555444433333321100 00000000 0
Q ss_pred CccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccc-c
Q 007637 275 TVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQ-Q 353 (595)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~ 353 (595)
+ . +..+.+.++....... .++....+ .
T Consensus 201 --------------------~---~--------------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~ 228 (400)
T PRK11646 201 --------------------M---T--------------------------RVLRDKRFVTYVLTLT---GYYMLAVQVM 228 (400)
T ss_pred --------------------H---H--------------------------HHHcCchHHHHHHHHH---HHHHHHHHHH
Confidence 0 0 0000111111111111 11111111 1
Q ss_pred -ceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 007637 354 -TFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAA 432 (595)
Q Consensus 354 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~ 432 (595)
..+.+.. ...++ ....+.......+...... ....++.++ | .+..+.+..+.++.++++..++
T Consensus 229 ~~~p~~~~----~~~~~--~~~~g~l~~~~~~~~~~~~----~~~~~~~~~---r---~~~~~~~~~~~~~~~~~~~~l~ 292 (400)
T PRK11646 229 LMLPIMVN----DIAGS--PSAVKWMYAIEACLSLTLL----YPIARWSEK---R---FRLEHRLMAGLLIMSLSMFPIG 292 (400)
T ss_pred HhhhhhHH----hhcCC--chHHHHHHHHHHHHHHHHH----HHHHHHHHH---h---cchhHHHHHHHHHHHHHHHHHH
Confidence 1111111 11100 0001111111111111111 112222222 2 3333456677777777766555
Q ss_pred HHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHH
Q 007637 433 VVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGG 512 (595)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~ 512 (595)
... +.+++....++.+++.+...|...++..+.+|++.||+++|+.++...+|..+|+
T Consensus 293 ~~~----------------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~ 350 (400)
T PRK11646 293 MVS----------------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGY 350 (400)
T ss_pred Hhh----------------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcc
Confidence 433 3444555556778888888899999999999999999999999999999999999
Q ss_pred HHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHH
Q 007637 513 LLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFL 559 (595)
Q Consensus 513 ~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~ 559 (595)
.+.|.+.+..... +.....|+..+++++++.+...
T Consensus 351 ~l~G~l~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 351 IGGGWLFDLGKAL------------NQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred cchHHHHHHHhhc------------CCcchHHHHHHHHHHHHHHHHH
Confidence 9999988754210 1123456666666666655444
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=7.6e-23 Score=218.80 Aligned_cols=181 Identities=18% Similarity=0.121 Sum_probs=149.0
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF 107 (595)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 107 (595)
+.+|..+...+...+++.+..+......+ .+.+++|+++.+.+++.+.+.++..+++++.|+++||+ ||||++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 35666666666677777766666544444 55678999999999999999999999999999999995 99999999998
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
+..++.+++.+.. ++..+++.|++.|++.+...+...+++.|.+|+ ++|
T Consensus 89 ~~~~~~~~~~~~~------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~r 137 (406)
T PRK11551 89 LFGLFSLATAQAW------------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGP-------RLR 137 (406)
T ss_pred HHHHHHHHHHHhc------------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCH-------HHH
Confidence 8888877766644 577889999999999999999999999999988 448
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
+++.++.+...++|..+++.+++.+.+..+|+..|++.++..++..+......+
T Consensus 138 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (406)
T PRK11551 138 GTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLP 191 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999988888899999999877655544444433333
No 11
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=1.2e-22 Score=216.31 Aligned_cols=368 Identities=12% Similarity=0.065 Sum_probs=237.5
Q ss_pred CchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Q 007637 31 LRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSL 110 (595)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 110 (595)
|..++.+.+..++.....+...+.+ +.+.+++|.++.+.+++.+.+.++..++++++|+++||+ ||||++..+.++..
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLL-SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcch-HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 4444444444455444444333333 456789999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhH
Q 007637 111 LGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETF 190 (595)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (595)
++++.+.++. +.+.+++.|+++|++.+...+...+++.|++|+ ++|+++
T Consensus 86 ~~~~~~~~~~------------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~ 134 (390)
T PRK03545 86 ASHVLSALAW------------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPA-------GKKAQA 134 (390)
T ss_pred HHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-------hhhhhH
Confidence 9988887765 678899999999999998889999999999998 348999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhcccc
Q 007637 191 FNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLY 270 (595)
Q Consensus 191 ~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (595)
+++.....++|..++|.+++.+.++.|||+.|++.++..++..+..+...|+.+++ +++..++ .
T Consensus 135 ~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~----~---------- 198 (390)
T PRK03545 135 LSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE--HSGSLKS----L---------- 198 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CcchHHH----H----------
Confidence 99999999999999999999999989999999998876665544444333321110 0000000 0
Q ss_pred CCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHH-hhhhhhHhhhhh
Q 007637 271 PSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRIT-PMCSTGIIILLS 349 (595)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~ 349 (595)
.++.+.+.+.... ..+......+..
T Consensus 199 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (390)
T PRK03545 199 ------------------------------------------------------PLLFRRPALVSLYLLTVVVVTAHFTA 224 (390)
T ss_pred ------------------------------------------------------HHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 0000011111111 111111111111
Q ss_pred ccc-cceeeeeccccCCCCCCCccccccc---ccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHH
Q 007637 350 LNQ-QTFATLQAKTMDRHISPSFQIPAGS---FTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSA 425 (595)
Q Consensus 350 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~ 425 (595)
+.. ..+ .. ...+ .+... +.....+..++...+ ..++.+|.++ +.+..+..+..
T Consensus 225 ~~~~~~~--l~-----~~~g----~s~~~~~~~~~~~~~~~~~g~~~----~g~l~dr~~~--------~~~~~~~~~~~ 281 (390)
T PRK03545 225 YSYIEPF--VQ-----QVAG----LSENFATLLLLLFGGAGIIGSVL----FSRLGNRHPS--------GFLLIAIALLL 281 (390)
T ss_pred HHHHHHH--HH-----HhcC----CCccHHHHHHHHHHHHHHHHHHH----HHHHhhccch--------hHHHHHHHHHH
Confidence 111 111 11 1111 11111 112222222222222 2222344322 23445555444
Q ss_pred HHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHH
Q 007637 426 VSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMA 505 (595)
Q Consensus 426 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ 505 (595)
++........ .+.+.+.+..++.|++.....+.......+..| +.|++++|+.+....
T Consensus 282 ~~~~~l~~~~---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 339 (390)
T PRK03545 282 VCLLLLLPAA---------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFN 339 (390)
T ss_pred HHHHHHHHHh---------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHH
Confidence 4443332222 245556667778888887777878888888877 578999999999999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 007637 506 VANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCC 562 (595)
Q Consensus 506 lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~ 562 (595)
+|..+|+.+.|.+.+.. ++...|++.+.+.++++++++...
T Consensus 340 ~g~~~G~~~~G~~~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 340 IGIGAGALLGNQVSLHL----------------GLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHhcc----------------ChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999988532 345678888888888887776654
No 12
>PRK12382 putative transporter; Provisional
Probab=99.92 E-value=4.9e-22 Score=211.67 Aligned_cols=372 Identities=12% Similarity=0.090 Sum_probs=237.6
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+.++...+..++..++.....+.++.|+.+++|+|+.+.+++.+.+.++..++++++|+++||+ ||||+++.+.+...+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHH
Confidence 4455555566677777777778889999999999999999999999999999999999999996 999999999887766
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.+........+. ....+...++++|+++|++.+...+...+++.|.+|+++ |++++
T Consensus 94 ~~~~~~~~~~~~~----------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~-------r~~a~ 150 (392)
T PRK12382 94 AGLAYLLAAILPV----------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH-------SGKVM 150 (392)
T ss_pred HHHHHHhhhcccc----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc-------cchhh
Confidence 6543322211110 001267889999999999999888888889999998743 89999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccC
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYP 271 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (595)
++...+.++|..++|.+++++.+.+||++.+.+..+..++... +. ++.++.+++++. +
T Consensus 151 ~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~---------------~--- 208 (392)
T PRK12382 151 SWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA---FN-GTVRKVPAHAGE---------------R--- 208 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH---HH-HhccCCCCCccc---------------C---
Confidence 9998888999999999999999989999877655443222221 11 111111000000 0
Q ss_pred CCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhH-HhhhhhhHhhhhhc
Q 007637 272 SSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRI-TPMCSTGIIILLSL 350 (595)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~ 350 (595)
+ +.. +..|.++.. .........+....
T Consensus 209 -------------------~--~~~-------------------------------~~~~~~~~~~~~~~l~~~~~~~~~ 236 (392)
T PRK12382 209 -------------------P--SLW-------------------------------SVVGLIWKPGLGLALQGVGFAVIG 236 (392)
T ss_pred -------------------c--hHH-------------------------------HHHHHHHHhHHHHHHHHHHHhHHH
Confidence 0 000 000111000 00000001111110
Q ss_pred cc-cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHH
Q 007637 351 NQ-QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMA 429 (595)
Q Consensus 351 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~ 429 (595)
.. ..+ .. +.... ..........+..++..++. .++.+|.++| +.+..+..+.++++.
T Consensus 237 ~~~~~~--~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~----g~l~~r~g~~-------~~~~~~~~~~~~~~~ 294 (392)
T PRK12382 237 TFVSLY--FA----SKGWA-----MAGFTLTAFGGAFVLMRVLF----GWMPDRFGGV-------KVAIVSLLVETVGLL 294 (392)
T ss_pred HHHHHH--HH----hcCCc-----hhHHHHHHHHHHHHHHHHHH----HHHHHhcCCC-------eehHHHHHHHHHHHH
Confidence 01 111 01 11110 01111122222223333332 2335554443 356666666666665
Q ss_pred HHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHH
Q 007637 430 SAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANL 509 (595)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ 509 (595)
...... +.++..+..++.+++.+...+.......+.+|++.||+++|+++....+|+.
T Consensus 295 ~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 352 (392)
T PRK12382 295 LLWLAP----------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYG 352 (392)
T ss_pred HHHHcc----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 554322 4455556677888888888888888889999999999999999999999999
Q ss_pred HHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHh
Q 007637 510 LGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVC 561 (595)
Q Consensus 510 ~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~ 561 (595)
+++.+.+.+.+.. ++.+.|.+.+++.+++.++.+..
T Consensus 353 ig~~~~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 353 VSGPLAGMLATSF----------------GYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHh----------------CchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999887643 23567888888777776665543
No 13
>PRK10504 putative transporter; Provisional
Probab=99.92 E-value=5e-22 Score=216.94 Aligned_cols=178 Identities=9% Similarity=0.031 Sum_probs=150.9
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+..+.+....++..+..+.+.+.++.+.. ++|++..+.+++.+.+.++..++.+++|+++||+ ||||+++.+.++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHH
Confidence 45666677778888888888888887764 6999999999999999999999999999999996 999999999888888
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.+.+.++. +...+++.|+++|++.+...|...+++.|.+|+ +.|++++
T Consensus 88 ~~~~~~~~~------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 136 (471)
T PRK10504 88 GSLFCALSG------------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR-------EQYMAAM 136 (471)
T ss_pred HHHHHHHhC------------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH-------HHHHHHH
Confidence 887766543 567788999999999999999999999999987 5589999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
++.+...++|..++|.+++++.++.|||+.|++......++.+......++
T Consensus 137 ~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 137 TFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999998877666555555444443
No 14
>PRK10054 putative transporter; Provisional
Probab=99.92 E-value=1.5e-22 Score=216.11 Aligned_cols=176 Identities=16% Similarity=0.171 Sum_probs=151.5
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSS 109 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 109 (595)
..|..+.+.+..++..++++.+.++++.|+++++|++..+.+++.+++.++..+++++.|+++||+ |||+++.++.+..
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHH
Confidence 346677788889999999999999999999999999999999999999999999999999999995 9999999999888
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
.++.+++++++ +.+.+++.+.+.+.+.+...++..++..|.+|+ ++|++
T Consensus 84 ~~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~ 132 (395)
T PRK10054 84 ASGFIAIPLVN------------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSS-------TSKTK 132 (395)
T ss_pred HHHHHHHHHHh------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-------hHHHH
Confidence 88887777654 566677788888888777788889999999887 44899
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
++++.+...++|.+++|.+++++.+ .+|+.+|++.+++.++..+...+
T Consensus 133 ~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 133 IFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998875 68999999887766665444433
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=6.9e-22 Score=204.62 Aligned_cols=378 Identities=12% Similarity=0.067 Sum_probs=258.0
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF 107 (595)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 107 (595)
+..|..++.+.+..|+....-|.....++ -+.+++|.|..++|+.++.|..+..++.|+...+.||+ .||++++..+.
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp-~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLP-PIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 45566677777777777766666655555 45789999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
++.++.+++++++ ++..+.++|++.|+..|.+++...++.++..|+ ++|
T Consensus 87 lFi~~n~l~alAp------------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp-------~~~ 135 (394)
T COG2814 87 LFIVSNLLSALAP------------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPP-------GKR 135 (394)
T ss_pred HHHHHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-------cch
Confidence 9999999999987 799999999999999999999999999999999 448
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc-cccccCCCCChhHHHHHHHHHHHhh
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH-LYIKVQPDKSLFTSFIQVIVASLRK 266 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (595)
+++.++...+..++.++|..++.++.+.+|||..|++.+++.+++++..+...| +...+++. ....+..
T Consensus 136 ~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~-~~~~~~~--------- 205 (394)
T COG2814 136 GRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISGSLP-GPLRTLL--------- 205 (394)
T ss_pred hhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCC-cchhHHH---------
Confidence 999999999999999999999999999999999999999888888888777776 11111110 1000000
Q ss_pred ccccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHH-hhhhhhHh
Q 007637 267 ISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRIT-PMCSTGII 345 (595)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~ 345 (595)
++-+++.++... ...+....
T Consensus 206 -----------------------------------------------------------~~l~~p~v~~~l~~t~l~~~g 226 (394)
T COG2814 206 -----------------------------------------------------------RLLRRPGVLLGLLATFLFMTG 226 (394)
T ss_pred -----------------------------------------------------------HHhcCchHHHHHHHHHHHHcc
Confidence 000111111111 11111111
Q ss_pred hhhhccccceeeeeccccCCCCCCCccc-ccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHH
Q 007637 346 ILLSLNQQTFATLQAKTMDRHISPSFQI-PAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLS 424 (595)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~ 424 (595)
.+. .| .|....+....+ ++. ..+.......+..++...+ ..++.|| + +.+.+.....+.
T Consensus 227 ~F~-----~f-tYi~P~L~~v~g--~s~~~vs~~Ll~~Gv~~~~Gn~~----gGrl~dr-~-------~~~~l~~~~~l~ 286 (394)
T COG2814 227 HFA-----LY-TYIRPFLESVAG--FSVSAVSLVLLAFGIAGFIGNLL----GGRLADR-G-------PRRALIAALLLL 286 (394)
T ss_pred hhh-----hH-HhHHHHHHHccC--CCHhHHHHHHHHHHHHHHHHHHH----Hhhhccc-c-------chhHHHHHHHHH
Confidence 111 11 222322222221 111 1122333333433333333 2233444 2 224566666777
Q ss_pred HHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHH
Q 007637 425 AVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGM 504 (595)
Q Consensus 425 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~ 504 (595)
++.+..+.+.. .+.+..+...++.++.........+...++.+ ++.++.+++++....
T Consensus 287 a~~~l~l~~~~---------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~ 344 (394)
T COG2814 287 ALALLALTFTG---------------------ASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAF 344 (394)
T ss_pred HHHHHHHHHhc---------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHH
Confidence 77777666544 24445555555556555555555555555544 466999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 007637 505 AVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAY 565 (595)
Q Consensus 505 ~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~ 565 (595)
++|..+|..+.|.+.+.. ++....++.+++.++++++.+...+..
T Consensus 345 nlgia~GA~lGG~v~~~~----------------g~~~~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 345 NLGIALGAALGGLVLDAL----------------GYAATGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred HHHHHHHHHHHHHHHHhh----------------chHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999988642 345677888888888777766655433
No 16
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.91 E-value=6.8e-22 Score=211.33 Aligned_cols=377 Identities=14% Similarity=0.083 Sum_probs=239.4
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhh-----HHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAAN-----GASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF 107 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~-----~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 107 (595)
.........++...++....++++.|++ ++|++..+ .+++.+++.+...++.+++|+++||+ |||+++..+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 92 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHH
Confidence 3444555677778888888888888875 58888655 37889999999999999999999996 99999999998
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
+.+++.+++.+.. +.+.+++.|++.|++.+ ..+...+++.+.+|+ ++|
T Consensus 93 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~-------~~~ 140 (408)
T PRK09874 93 GMGIVMVLMGLAQ------------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPR-------NKS 140 (408)
T ss_pred HHHHHHHHHHHHh------------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCH-------hhh
Confidence 8888887776544 57788899999999865 457778888888887 448
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhc
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKI 267 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (595)
++..++.+...++|..++|.+++.+.+..+|++.|++.++..++..+..++..++..++.++++. .+
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------ 207 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM-LH------------ 207 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh-hH------------
Confidence 99999999999999999999999999989999999988876665555544443332111000000 00
Q ss_pred cccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhh
Q 007637 268 SLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIIL 347 (595)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 347 (595)
..+..... .+.+......... ....
T Consensus 208 ---------------------------~~~~~~~~-------------------------~~~~~~~~~~~~~---~~~~ 232 (408)
T PRK09874 208 ---------------------------MREVVTSL-------------------------KNPKLVLSLFVTT---LIIQ 232 (408)
T ss_pred ---------------------------HHHHHHhC-------------------------cCCchHHHHHHHH---HHHH
Confidence 00000000 0001111011000 0000
Q ss_pred hhccc-cc-eeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHH
Q 007637 348 LSLNQ-QT-FATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSA 425 (595)
Q Consensus 348 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~ 425 (595)
..... .+ +..+.... ..... ......+.+.....+...+..+..+ ++.+|.++| +.+..+.++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~~l~~~~~~~~~g----~l~dr~g~~-------~~~~~~~~~~~ 299 (408)
T PRK09874 233 VATGSIAPILTLYVREL-AGNVS-NIAFISGMIASVPGVAALLSAPRLG----KLGDRIGPE-------KILITALIFSV 299 (408)
T ss_pred HHHHHHHHHHHHHHHHH-hccch-HHHHHHHHHHHHHHHHHHHHHHHHH----HHHhccccc-------hhHHHHHHHHH
Confidence 11111 00 00111100 00000 0000001111112222223333322 234554433 45666666555
Q ss_pred HHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHH
Q 007637 426 VSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMA 505 (595)
Q Consensus 426 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ 505 (595)
+.++...... +.+.+.+..++.|++.+...+...++..+..|++.+|+.+|+.+....
T Consensus 300 ~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 357 (408)
T PRK09874 300 LLLIPMSFVQ----------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRD 357 (408)
T ss_pred HHHHHHHHhc----------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHH
Confidence 5555444322 445556666788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 007637 506 VANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCC 562 (595)
Q Consensus 506 lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~ 562 (595)
+|..+|+.+.+.+.+.. +++..|.+.+++.+++.++.+...
T Consensus 358 ~g~~~gp~~~G~l~~~~----------------g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 358 IGNVTGPLMGAAISANY----------------GFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHhhHHHHHHHHhhc----------------chhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999876422 246788888888888777665543
No 17
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.91 E-value=9.4e-22 Score=212.63 Aligned_cols=172 Identities=10% Similarity=0.136 Sum_probs=140.6
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+.++..++..++..+..+.....++.+ .+++|+|..+.+++.+.+.++..++++++|+++||+ |||+++.++.++..+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHH
Confidence 333333444444444444444455544 567999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.++++++. +++.+++.|++.|++.|...+...+++.+++|+ ++|++++
T Consensus 101 ~~~~~~~~~------------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~-------~~rg~~~ 149 (434)
T PRK11663 101 INILFGFSS------------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSR-------TERGGWW 149 (434)
T ss_pred HHHHHHHHh------------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCH-------HHHHHHH
Confidence 988877655 677888899999999999999999999999998 4589999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMF 236 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 236 (595)
++++.+.++|..++|.+.+++.+.+|||+.|++.++..++..+..
T Consensus 150 ~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 150 AIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998776655443333
No 18
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.91 E-value=5.2e-22 Score=224.05 Aligned_cols=152 Identities=16% Similarity=0.073 Sum_probs=129.4
Q ss_pred hHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 007637 52 LPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCN 131 (595)
Q Consensus 52 ~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 131 (595)
...+.+.+.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++.+++.++++++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~----------- 253 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ----------- 253 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 34455667788999999999999999999999999999999995 999999999999888888877755
Q ss_pred ccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHH
Q 007637 132 QLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVY 211 (595)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 211 (595)
++..++++|++.|++.|+..|...++++|.+|+ +.|++.+++......+|.++++.++.+
T Consensus 254 -------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~-------~~Rg~~~g~~~~~~~iG~ila~~la~~ 313 (742)
T TIGR01299 254 -------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ-------EKRGEHLSWLCMFWMIGGIYAAAMAWA 313 (742)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999998 669999999998899999999987766
Q ss_pred hhcc-------------cchhHHHHHHHHHHHHHHHH
Q 007637 212 IQDH-------------LGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 212 l~~~-------------~g~~~~f~~~~~~~~~~~~~ 235 (595)
+... .+||+.|++.++..+++++.
T Consensus 314 il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~ 350 (742)
T TIGR01299 314 IIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGA 350 (742)
T ss_pred HHHhccchhccccccccccHHHHHHHHHHHHHHHHHH
Confidence 5532 36899888877665554443
No 19
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.91 E-value=1.4e-21 Score=206.39 Aligned_cols=158 Identities=11% Similarity=0.069 Sum_probs=124.7
Q ss_pred hHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 007637 52 LPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCN 131 (595)
Q Consensus 52 ~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 131 (595)
.....+.+++++|+|+++.+++.+.+.+++.++++++|+++||+ |||+++..+......+. +.....
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~-~~~~~~----------- 76 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAA-GRLLDP----------- 76 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHH-HHHHHh-----------
Confidence 34444556788999999999999999999999999999999996 99998765554444432 222221
Q ss_pred ccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHH
Q 007637 132 QLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVY 211 (595)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 211 (595)
.++..+++.|+++|++.+.. +...+..+|++|+ ++|+++.++.+.+.++|.+++++++++
T Consensus 77 ------------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~-------~~r~~a~~~~~~~~~lG~~l~~~~~~~ 136 (368)
T TIGR00903 77 ------------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIRE-------ERRDLVISLLSFAMYLGIIFALAAGLK 136 (368)
T ss_pred ------------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 15788999999999999864 5555666899998 448999999999999999999999999
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 212 IQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 212 l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
+.+++|||+.|++.+++.++..+..++..|+
T Consensus 137 l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 137 IYTAGGLQLLIIPIAAVAAAGIILVLAALPA 167 (368)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999998777666555555554443
No 20
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.91 E-value=1.8e-21 Score=209.18 Aligned_cols=379 Identities=12% Similarity=0.016 Sum_probs=231.3
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTL 116 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~ 116 (595)
.+...++..++.......++.+. ++++.++.+.+++.+.+.++..+++++.|+++||+ |||+++..+.++.+++...+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHH
Confidence 34445556666555555666664 56788999999999999999999999999999996 99999998888777776655
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
....... ..+.+.+++.|++.|++.+...++..+++.|.+|+ ++|+++.++.+.
T Consensus 100 ~~~~~~~-------------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 153 (417)
T PRK10489 100 ALNAFLP-------------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGR-------ENLMQAGAITML 153 (417)
T ss_pred HHHHHcC-------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCH-------HHHHHHHHHHHH
Confidence 4321000 11467788899999999888888888999999887 448899999989
Q ss_pred HHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCC-CCChhHHHHHHHHHHHhhccccCCCCC
Q 007637 197 STSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQP-DKSLFTSFIQVIVASLRKISLYPSSNT 275 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (595)
..++|..+||.+++++.+..+|++.|++.++..+++.+..+. .++.++++. +++...+..
T Consensus 154 ~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~------------------ 214 (417)
T PRK10489 154 TVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR-LPALPPPPQPREHPLRSLL------------------ 214 (417)
T ss_pred HHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCCCCCCCcccccchHHHH------------------
Confidence 999999999999999998889999998877665555444332 222111000 000000000
Q ss_pred ccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccccce
Q 007637 276 VNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTF 355 (595)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 355 (595)
+.. ..+.+.+.+....... ...........+
T Consensus 215 ---------------------~~~-------------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 245 (417)
T PRK10489 215 ---------------------AGF-------------------------RFLLASPVVGGIALLG---GLLTMASAVRVL 245 (417)
T ss_pred ---------------------HHH-------------------------HHHHcChHHHHHHHHH---HHHHHHHhHHHh
Confidence 000 0000011111111110 011101000111
Q ss_pred eeeeccccCCCCCCCccccc---ccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 007637 356 ATLQAKTMDRHISPSFQIPA---GSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAA 432 (595)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~ 432 (595)
.........+ .+. +.+.....+..++...+.++ +.++ .++.+.+..+.++.+++++.+.
T Consensus 246 ---~p~~~~~~~g----~~~~~~g~~~~~~~~g~~ig~~~~~~----l~~~-------~~~~~~l~~~~~~~~~~~~~~~ 307 (417)
T PRK10489 246 ---YPALADEVWQ----MGAAQIGLLYAAVPLGAALGALTSGW----LAHS-------ARPGLLMLLSTLGSFLAVGLFG 307 (417)
T ss_pred ---hHHHHHhccC----CChhHhHHHHHHHHHHHHHHHHHHHH----hhhc-------cCcchHHHHHHHHHHHHHHHHH
Confidence 0111111111 111 12222222333333332222 2222 2222455666666666665554
Q ss_pred HHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHH
Q 007637 433 VVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGG 512 (595)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~ 512 (595)
..+ +.+......++.|++.+...+...++..+..|++.||+++|+++..+.+|+.+|+
T Consensus 308 ~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~ 365 (417)
T PRK10489 308 LMP----------------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGA 365 (417)
T ss_pred ccc----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHH
Confidence 322 4455556677788888887888888999999999999999999999999999999
Q ss_pred HHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007637 513 LLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGP 567 (595)
Q Consensus 513 ~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~~ 567 (595)
.+.|.+.+..+ +...+...++..++..++.+...+++|+
T Consensus 366 ~l~G~l~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 366 ALLGGLGAMMT----------------PVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred HHHHHHHHHhc----------------hhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999886431 2345555565555555555555454443
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.91 E-value=7.5e-22 Score=216.96 Aligned_cols=401 Identities=14% Similarity=0.084 Sum_probs=237.3
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
..+..+....++..+....+...+| .+.+++|.+..+.+|+.+.+.++..++.+++|+++||+ |||++++++.++..+
T Consensus 6 ~~~~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 6 LTLVIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGL 83 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHH
Confidence 3344444455555555554444444 45678999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.++++++. +.+.++++|+++|+|.+...|...+.+.+.++++ ++|++++
T Consensus 84 ~~~~~~~a~------------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~------~~r~~~~ 133 (495)
T PRK14995 84 ASLAAAFSP------------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEE------KQRNMAL 133 (495)
T ss_pred HHHHHHHcC------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH------HHHHHHH
Confidence 999988765 6788999999999999998888888787776442 4499999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHH-HH---HH--HHHHHh
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTS-FI---QV--IVASLR 265 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~--~~~~~~ 265 (595)
+++....++|..+||.+++++.++.|||+.|++...+.++.+++.++..++.++++.++.+... .. .. +...++
T Consensus 134 g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~ 213 (495)
T PRK14995 134 GVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAK 213 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988776666655555544443221111111111 00 00 011111
Q ss_pred hccccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHh
Q 007637 266 KISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGII 345 (595)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 345 (595)
+.............. .--....+......+.+ ...|.. ..+.-+.|.+..........
T Consensus 214 ~~~~~~~~~~~~~~~--------~~~~~~~l~~f~~~e~~---------~~~p~~---~~~lf~~~~~~~~~~~~~~~-- 271 (495)
T PRK14995 214 TALKGFLSLWVTSLT--------LLTGALLLGLFIRTQLA---------ASRPMI---DMRLFTHRIILSGVVMAMTA-- 271 (495)
T ss_pred hccccCCchHHHHHH--------HHHHHHHHHHHHHHHhc---------CCCCCc---CHHHhCCcccHHHHHHHHHH--
Confidence 100000000000000 00000000000000000 001110 00111112211111111000
Q ss_pred hhhhccccceeeeeccccCCCCCCCcc-cccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHH
Q 007637 346 ILLSLNQQTFATLQAKTMDRHISPSFQ-IPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLS 424 (595)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~ 424 (595)
....+... .+...+++...+ ++ ...+.......+...+..++.+. +.+|.++| +.+..|.++.
T Consensus 272 ~~~~~~~~---~~~~~~lq~v~g--~s~~~ag~~~~~~~~~~~~~~~~~g~----l~~r~g~~-------~~~~~g~~~~ 335 (495)
T PRK14995 272 MITLVGFE---LLMAQELQFVHG--LSPLEAGMFMLPVMVASGFSGPIAGI----LVSRLGLR-------LVATGGMALS 335 (495)
T ss_pred HHHHHHHH---HHHHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHcCch-------HHHHHHHHHH
Confidence 00000000 001111111110 00 11122222233333334444333 35554433 4666777777
Q ss_pred HHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHH
Q 007637 425 AVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGM 504 (595)
Q Consensus 425 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~ 504 (595)
++++..+.... ...+.+......++.|+|.++..+.....+.+..|++.++.+.++.++.+
T Consensus 336 ~~~~~~l~~~~-------------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 396 (495)
T PRK14995 336 ALSFYGLAMTD-------------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAY 396 (495)
T ss_pred HHHHHHHHHhc-------------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHH
Confidence 77766554432 11244555667788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 007637 505 AVANLLGGLLVKIVDRV 521 (595)
Q Consensus 505 ~lg~~~g~~l~~~i~~~ 521 (595)
.+|+.+|+.+.+.+.+.
T Consensus 397 ~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 397 ELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988753
No 22
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=5.9e-22 Score=209.08 Aligned_cols=157 Identities=15% Similarity=0.103 Sum_probs=137.5
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCc
Q 007637 53 PNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQ 132 (595)
Q Consensus 53 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 132 (595)
....+++.+++|++..+.+++.+++.++..++.++.|+++||+ |||+++.++.++..++..+++++.
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 80 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------ 80 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc------------
Confidence 4444567889999999999999999999999999999999996 999999999999888888887755
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHh
Q 007637 133 LVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYI 212 (595)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l 212 (595)
+.+.++++|+++|++.+...+...+++.|.+|+ ++|++.+++.....++|..++|.+++++
T Consensus 81 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l 141 (399)
T TIGR00893 81 ------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPA-------SERATAVSIFNSAQGLGGIIGGPLVGWI 141 (399)
T ss_pred ------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH-------HHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 678899999999999999999999999999998 5589999999999999999999999999
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 213 QDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 213 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
.+..+|++.|++.++..++..+..++..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 142 LIHFSWQWAFIIEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred HHhCCchHHHHHHHHHHHHHHHHhhheec
Confidence 99999999999887766655555444333
No 23
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=1.1e-21 Score=210.49 Aligned_cols=181 Identities=12% Similarity=0.011 Sum_probs=147.6
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
.+|+..+.+.+..+++...... ..+..+.+++++|++..+.+++.+++.++..+++++.|+++||+ |||+++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRIN-IGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhh-HHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence 3556555555544444333333 34455688999999999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
..++..+++++. +...+++.|+++|++.|...|...+++.|++|+ ++|+
T Consensus 83 ~~~~~~~~~~~~------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-------~~rg 131 (412)
T TIGR02332 83 WGIASTATMFAT------------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPA-------YFRA 131 (412)
T ss_pred HHHHHHHHHHhc------------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCH-------HHHH
Confidence 999998888765 577899999999999999999999999999998 5589
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQD------HLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~------~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
+..++++...++|.++++.+++++.+ ..|||+.|++.++..++..++.++..++
T Consensus 132 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 132 RANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999998864 3699999999777665554444444444
No 24
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.90 E-value=4.5e-22 Score=216.34 Aligned_cols=152 Identities=13% Similarity=0.072 Sum_probs=125.8
Q ss_pred HHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccc
Q 007637 55 MIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLV 134 (595)
Q Consensus 55 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 134 (595)
....+.+++|++.++.+++.+.+.++..++.+++|+++||+ |||++++.+.++..+++++++++.
T Consensus 41 ~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~-------------- 105 (455)
T TIGR00892 41 FFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS-------------- 105 (455)
T ss_pred hHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh--------------
Confidence 34456788999999999999999999999999999999995 999999999988888888877654
Q ss_pred cCCCCCCCchhHHHHHH-HHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhh
Q 007637 135 SSNCSSATPAQFAILLS-SFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQ 213 (595)
Q Consensus 135 ~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~ 213 (595)
+.+.+++ .|++.|++.|...+...+++.+++++ +|+++.++.+.+.++|..++|.+++++.
T Consensus 106 ----------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~--------~r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 106 ----------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYR--------RRPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred ----------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHh--------hHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 4555554 56888999987766677788888742 2899999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhh
Q 007637 214 DHLGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 214 ~~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
+.+|||++|++.+++.+++.+..++.
T Consensus 168 ~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 168 ESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999887766555544443
No 25
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=2.4e-21 Score=207.37 Aligned_cols=163 Identities=16% Similarity=0.112 Sum_probs=134.0
Q ss_pred HHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 007637 46 VASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQL 125 (595)
Q Consensus 46 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~ 125 (595)
.+...+.+.++. +.+++|.+..+.++..+.+.++..++.++.|+++||+ ||||+++++.+...++.+.+.++.
T Consensus 27 ~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~----- 99 (406)
T PRK15402 27 IANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ----- 99 (406)
T ss_pred hhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc-----
Confidence 344444444554 5678999999999999999999999999999999996 999999999988888887776654
Q ss_pred CCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHH
Q 007637 126 KPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLA 205 (595)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 205 (595)
+.+.+++.|+++|++.+...+...+++.|.+|+ +.|.+..++......++..++
T Consensus 100 -------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~~~~g 153 (406)
T PRK15402 100 -------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEE-------ADAIKITALMANVALLAPLLG 153 (406)
T ss_pred -------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhCh-------hHHHHHHHHHHHHHHHHHHHH
Confidence 567788999999999998888889999999988 347778888877778899999
Q ss_pred HHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 206 FTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 206 p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
|.+++++.++.+|++.|++.++..+++.+..++..|
T Consensus 154 ~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 189 (406)
T PRK15402 154 PLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMP 189 (406)
T ss_pred HHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999899999999877776665554444333
No 26
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=3.4e-21 Score=203.23 Aligned_cols=174 Identities=15% Similarity=0.114 Sum_probs=136.0
Q ss_pred HHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH-HHHHHHHHHHHHH
Q 007637 39 VNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILL-GSFSSLLGTTTLW 117 (595)
Q Consensus 39 ~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~-~~~~~~l~~~~~~ 117 (595)
+..++..++.....+.++.|+++++|.|+.+.+++.+.+.+...+.+++.|+++||+ ||||.++. +.+...++..+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHH
Confidence 456777788888889999999999999999999999999999999999999999996 99987655 4555555655655
Q ss_pred HhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHH
Q 007637 118 STAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAS 197 (595)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (595)
++. +++.+++.|++++.+.+...|...++..|..|+++ +.++...+..+..
T Consensus 83 ~~~------------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 133 (375)
T TIGR00899 83 WNR------------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG-----REAVMFSSVMRAQ 133 (375)
T ss_pred hcc------------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc-----hhhHHHHHHHHHH
Confidence 543 56777888888888777778888888888776533 1123335777777
Q ss_pred HhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 198 TSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 198 ~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
.++|.+++|.+++++.+..|||+.|++.++..++..+..++..++
T Consensus 134 ~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 178 (375)
T TIGR00899 134 ISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPS 178 (375)
T ss_pred HhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 889999999999999998999999999887666555554443443
No 27
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.90 E-value=2e-21 Score=203.39 Aligned_cols=357 Identities=12% Similarity=0.032 Sum_probs=227.6
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTL 116 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~ 116 (595)
+....++..++.......++.|.. +++.+..+.+++.+++.++..++.++.|+++||+ ||||+++.+.++..++..+.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 344566666666666677777765 5899999999999999999999999999999996 99999999988887777766
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
.+....+ ..+.+.+++.|+++|++.+...+...+++.|.+|+ ++|++.+++.+.
T Consensus 82 ~~~~~~~-------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 135 (365)
T TIGR00900 82 PFVALLG-------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPE-------EQLTQANSLSQA 135 (365)
T ss_pred HHHHHcC-------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-------HHHHHHHhHHHH
Confidence 6543111 12578889999999999999999999999999998 448999999999
Q ss_pred HHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCCCCc
Q 007637 197 STSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTV 276 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (595)
..++|..++|.+++++.+..||++.|++.++..+++.+..+....+.+++++.++...+..+
T Consensus 136 ~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 197 (365)
T TIGR00900 136 VRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLR------------------ 197 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHH------------------
Confidence 99999999999999999999999999887776655544443332211111000000000000
Q ss_pred cccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhh-hhHhhhhhc-cccc
Q 007637 277 NYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCS-TGIIILLSL-NQQT 354 (595)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~-~~~~ 354 (595)
+..+.. ++..+.|.+........ ....+.... ...+
T Consensus 198 -----------------~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (365)
T TIGR00900 198 -----------------DTREGI-------------------------KFVLKNPLLRTLLLLALLFNLVFAPAIVALFP 235 (365)
T ss_pred -----------------HHHhHH-------------------------HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 000000 00001111111111111 011111111 0111
Q ss_pred eeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 007637 355 FATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVV 434 (595)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~ 434 (595)
+ +.....+... ...+.......+..++..++.+ ++.+|.+ +++.+..+..+.++++....+.
T Consensus 236 ~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 297 (365)
T TIGR00900 236 Y--VQSKYLGRGS-----THYGWVLAAFGLGALLGALLLG----LLGRYFK-------RMALMTGAIFVIGLAILVVGLT 297 (365)
T ss_pred H--HHHHHhCCch-----HHHHHHHHHHHHHHHHHHHHHH----HHHHHhc-------hhHHHHHHHHHHHHHHHHHHhh
Confidence 1 1111011000 0111222222333333333322 2234332 2245555655566665555443
Q ss_pred HHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 007637 435 ENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLL 514 (595)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l 514 (595)
. .+.+...+..++.+++.....+...++..|..|++.|++++|+.++.+.++..+++.+
T Consensus 298 ~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~ 356 (365)
T TIGR00900 298 P---------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLIL 356 (365)
T ss_pred c---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1355666777889999999999999999999999999999999999999999999999
Q ss_pred HHHHhh
Q 007637 515 VKIVDR 520 (595)
Q Consensus 515 ~~~i~~ 520 (595)
.+.+.+
T Consensus 357 ~g~l~~ 362 (365)
T TIGR00900 357 AGPLAD 362 (365)
T ss_pred HHHHHH
Confidence 988775
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.90 E-value=3.4e-21 Score=205.56 Aligned_cols=152 Identities=16% Similarity=0.140 Sum_probs=129.4
Q ss_pred HhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 007637 47 ASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLK 126 (595)
Q Consensus 47 ~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~ 126 (595)
.++.+.+.+| .+.+++|+|..+.+++.+.+.++..+++++.|+++||+ |||+++..+.++.+++.+++++++
T Consensus 24 ~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~------ 95 (393)
T PRK09705 24 LLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP------ 95 (393)
T ss_pred hhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc------
Confidence 3344444454 56789999999999999999999999999999999996 999999999999999999999866
Q ss_pred CCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHH
Q 007637 127 PAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAF 206 (595)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 206 (595)
++..++++|+++|++.+...+...+++.+++|+ + |+++.+.+..+.++|..+++
T Consensus 96 ------------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~-~-------~~~~~g~~~~~~~~g~~~g~ 149 (393)
T PRK09705 96 ------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQ-R-------TPLVMGLWSAALMGGGGLGA 149 (393)
T ss_pred ------------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHccc-c-------chhHHHHHHHHHHHHHHHHH
Confidence 567789999999999999999999999888863 2 78999999888899999999
Q ss_pred HHHHHhhccc-chhHHHHHHHHHHHHH
Q 007637 207 TIIVYIQDHL-GWKIGFGVRAILMVLS 232 (595)
Q Consensus 207 ~~~~~l~~~~-g~~~~f~~~~~~~~~~ 232 (595)
.+++++.++. +||..+.+.++..++.
T Consensus 150 ~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 150 AITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 9999988875 8999887655544433
No 29
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.90 E-value=1.3e-21 Score=213.93 Aligned_cols=186 Identities=9% Similarity=0.046 Sum_probs=135.3
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhc--------CCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGY--------HVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWV 101 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--------~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~ 101 (595)
+.+.++...+..+.+.+....+....+ .+++.+ +.++.+.+++.+++.++..++++++|+++||+ ||||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVE-SLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHH-HHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHH
Confidence 344444444444444443333333332 234444 89999999999999999999999999999995 99999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCc
Q 007637 102 ILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNP 181 (595)
Q Consensus 102 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~ 181 (595)
++++.+++.++.+.+++....-.. ....+......++++|+++|++.|...+...++++|++|+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~---- 151 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTS------------IGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPA---- 151 (479)
T ss_pred HHHHHHHHHHHHHHHHhhcccccc------------ccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCCh----
Confidence 999999988887776653200000 0000112456788999999999999999999999999999
Q ss_pred chhhhHhhHHHHHHHHHhhhhHHHHHHHHHhh--------cccchhHHHHHHHHHHHHHHHHH
Q 007637 182 KNKRVLETFFNWYYASTSVSGMLAFTIIVYIQ--------DHLGWKIGFGVRAILMVLSTLMF 236 (595)
Q Consensus 182 ~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~--------~~~g~~~~f~~~~~~~~~~~~~~ 236 (595)
++|++++++...+..+|.++++++++.+. +.+|||++|++.++..++..+..
T Consensus 152 ---~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~ 211 (479)
T PRK10077 152 ---HIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLL 211 (479)
T ss_pred ---hhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHH
Confidence 44899999999888999999887765543 35689999998777666554443
No 30
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.90 E-value=9.6e-21 Score=202.13 Aligned_cols=176 Identities=11% Similarity=0.165 Sum_probs=147.2
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHH
Q 007637 27 EGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGS 106 (595)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 106 (595)
.|..|+.+..+....++.....|.....++. +.+++|+++.+.++..+.+.++..+++++.|+++||+ ||||+++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~ 92 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFA 92 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHH
Confidence 4456666555555544455555555555555 4678999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhh
Q 007637 107 FSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRV 186 (595)
Q Consensus 107 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (595)
++.+++.+++.++. +++.+++.|+++|++.|...|...+++.|++|+ ++
T Consensus 93 ~~~~~~~~~~~~~~------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-------~~ 141 (394)
T PRK10213 93 VLLTLSCLLVSFAN------------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPP-------RT 141 (394)
T ss_pred HHHHHHHHHHHHHC------------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCH-------hH
Confidence 99999888877654 688899999999999999999999999999988 44
Q ss_pred HhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Q 007637 187 LETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 187 r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (595)
|+++.++.....++|..++|.+++++.+++|||+.|++.++..+++.+.
T Consensus 142 ~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 142 VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999877655544433
No 31
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.90 E-value=2.6e-21 Score=205.87 Aligned_cols=173 Identities=13% Similarity=0.150 Sum_probs=146.8
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHH
Q 007637 27 EGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGS 106 (595)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 106 (595)
.+.+|+......+..+.+.+..+......+ .+.+++|++..+.+++.+++.++..++.++.|+++||+ |||++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 456677777777777777777666655554 56788999999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhh
Q 007637 107 FSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRV 186 (595)
Q Consensus 107 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (595)
++.+++.+++.++. ++..+++.|++.|++.+...+...+++.|.+|+ ++
T Consensus 85 ~~~~~~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~-------~~ 133 (405)
T TIGR00891 85 VLFSAGTLACGFAP------------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPK-------HL 133 (405)
T ss_pred HHHHHHHHHHHHhc------------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCCh-------hh
Confidence 98888888877654 577889999999999999999999999999998 44
Q ss_pred HhhHHHHHHHHHhhhhHHHHHHHHHhhcccc--hhHHHHHHHHHHHHH
Q 007637 187 LETFFNWYYASTSVSGMLAFTIIVYIQDHLG--WKIGFGVRAILMVLS 232 (595)
Q Consensus 187 r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g--~~~~f~~~~~~~~~~ 232 (595)
|+++.++.....++|..+++.+.+.+.+..+ ||+.|++.++..++.
T Consensus 134 ~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 134 RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 8999999999999999999999998887766 999998765544443
No 32
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=4.4e-22 Score=203.44 Aligned_cols=396 Identities=14% Similarity=0.062 Sum_probs=256.3
Q ss_pred HHHHHHHHHHHHHhhhchH---HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 35 PFIIVNESFEKVASYGLLP---NMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~---~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+-++...++.-.++|.+.- ...+++.++.++|.+|.|.+.+++++.+.++-.+.|.++||. +.|+.+..++++.++
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai 106 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHH
Confidence 4456666777777787764 447889999999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
..+++.++. +...+.+..++.|..+|.-+|.+...++.+++.++ ||+..
T Consensus 107 ~nil~Gfs~------------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e-------RG~~~ 155 (448)
T COG2271 107 VNILFGFSP------------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE-------RGTWW 155 (448)
T ss_pred HHHHHhhhh------------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc-------cCceE
Confidence 999998876 77889999999999999999999999999999944 89999
Q ss_pred HHHHHHHhhhhHHHHHHH--HHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccc
Q 007637 192 NWYYASTSVSGMLAFTII--VYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISL 269 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~--~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (595)
++.+.+-|+|+.+.|++. +++..+++||..|++++++.++..+..++..++.++...-++ ..+ .+.
T Consensus 156 siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~-ie~-----------~~~ 223 (448)
T COG2271 156 SIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP-IEE-----------YRG 223 (448)
T ss_pred EEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC-HHH-----------hhc
Confidence 999999999999999999 899999999999999998877666665555554333221111 000 000
Q ss_pred cCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhh
Q 007637 270 YPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLS 349 (595)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 349 (595)
+.++. +.+++ + ... ... ...-.+..++.-.+|...+.+...
T Consensus 224 d~~e~---~~~~~-----------------------~------~~~-ls~------~~i~~~YVL~Nk~iW~la~a~vfv 264 (448)
T COG2271 224 DPLEI---YEEEK-----------------------E------NEG-LTA------WQIFVKYVLKNKLIWLLALANVFV 264 (448)
T ss_pred Cchhh---hhhhc-----------------------c------CCC-ccH------HHHHHHHHHcChHHHHHHHHHHHH
Confidence 00000 00000 0 000 000 001112233322333333333333
Q ss_pred c----cc---cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHH
Q 007637 350 L----NQ---QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLL 422 (595)
Q Consensus 350 ~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 422 (595)
| .. .+..+.+....+. ..........-+..+....+++++.+.+.+. +| .+ .-.+.++
T Consensus 265 YivR~gi~dW~p~YL~e~k~~s~-------~~a~~a~~lfE~agl~G~Ll~GwlSDklfkg--rR----~p--~~~i~~~ 329 (448)
T COG2271 265 YVVRYGINDWGPLYLSEVKGFSL-------VKANWAISLFEVAGLPGTLLAGWLSDKLFKG--RR----GP--MALIFML 329 (448)
T ss_pred HHHHHHHhhhHHHHHHHhcCCCH-------HHHHHHHHHHHHHhhHHHHHHHHHHHHhccc--cc----ch--HHHHHHH
Confidence 3 22 2221333222221 1233334444555666666777765444432 11 11 1111222
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHH
Q 007637 423 LSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTL 502 (595)
Q Consensus 423 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~ 502 (595)
...+++..+-.. .+.+.+.....++.+|+......-..-..+.|.+|++..|++.|+..+
T Consensus 330 ~i~~~~~~~w~~--------------------~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Gl 389 (448)
T COG2271 330 LITASLVLYWLA--------------------PNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGL 389 (448)
T ss_pred HHHHHHHHHHcC--------------------CCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhh
Confidence 222222222211 123556666666666665555554455577899999999999999998
Q ss_pred HHHH-HHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhc
Q 007637 503 GMAV-ANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWA 564 (595)
Q Consensus 503 ~~~l-g~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~ 564 (595)
+..+ |..++....+++.|.+ +| .+.|.++.+.++++.++++...+.
T Consensus 390 f~Yl~Ga~~a~~~~g~i~d~~------gW----------~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 390 FAYLIGAALAGLPLGYIADTW------GW----------DGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred HHHHhhHHhcCCcceeeEecC------CC----------cchHHHHHHHHHHHHHHHHHHHhh
Confidence 8888 7777877777766532 56 457888888887877776666543
No 33
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=2.7e-22 Score=215.74 Aligned_cols=376 Identities=17% Similarity=0.184 Sum_probs=253.4
Q ss_pred hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCC
Q 007637 62 GYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSA 141 (595)
Q Consensus 62 ~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (595)
+++++..+-+++.+.+..++.++++++|+++||+ |-|+++.++.++.++++++.+++...
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~------------------- 126 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASI------------------- 126 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 5889999999999999999999999999999996 99999999999999999999987622
Q ss_pred CchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcc-cchhH
Q 007637 142 TPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDH-LGWKI 220 (595)
Q Consensus 142 ~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~-~g~~~ 220 (595)
+.+.+++.|+++|++.|...|++..+.+.+.|+ .+|++..++.+.+..+|.+++..++|++.++ +||+.
T Consensus 127 ---~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~-------~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~s 196 (466)
T KOG2532|consen 127 ---GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPP-------NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPS 196 (466)
T ss_pred ---cchhhHHHHHHhHHHHhHHHhhhhceeeeECCH-------HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCch
Confidence 345789999999999999999999999999999 4589999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCCCCccccccCCCCccCCCCchhhhhhhh
Q 007637 221 GFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKAC 300 (595)
Q Consensus 221 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 300 (595)
+|++.+++.++..+++++...+.+.+.+.-+. +++..++..+
T Consensus 197 ifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~--------------------------------------~El~~I~~~k 238 (466)
T KOG2532|consen 197 IFYVFGIVGLIWFILWFLFYSDSPSKHPNISE--------------------------------------KELKYIEKGK 238 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCH--------------------------------------HHHHHHHhcc
Confidence 99999998888777776665544333221110 1111111111
Q ss_pred cccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccc-cceeeeeccccCCCCCCCccc-ccccc
Q 007637 301 MIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQ-QTFATLQAKTMDRHISPSFQI-PAGSF 378 (595)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~ 378 (595)
..+..+ .+ ...|| |.+++..++++..+..+..... ..+..+.+.+++..+ +|.+ .++.+
T Consensus 239 ~~~~~~-----~~-~~vP~-----------~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL--~f~v~~~G~~ 299 (466)
T KOG2532|consen 239 SEAHVK-----KK-PPVPY-----------KAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL--GFDVRETGFL 299 (466)
T ss_pred cccccC-----CC-CCCCH-----------HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh--CCChhhhhHH
Confidence 110000 00 23455 5566655555443332222221 222233333333333 2223 35667
Q ss_pred cchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHH--HHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCcccc
Q 007637 379 TVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRM--GIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMD 456 (595)
Q Consensus 379 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (595)
..+..+...+...+.+.+.+++..| .-. ....+++ .++....++.++.+++.. .
T Consensus 300 salP~l~~~~~k~~~g~lsD~l~~~-~ls---~t~~rkifn~i~~~~~ai~l~~l~~~~-------------------~- 355 (466)
T KOG2532|consen 300 SALPFLAMAIVKFVAGQLSDRLTFR-ILS---ETTVRKIFNTIAFGGPAVFLLVLAFTS-------------------D- 355 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-cCc---hHhHHHHHHhHHHHHHHHHHHeeeecC-------------------C-
Confidence 7777777777777777776655554 222 2333444 355555555666665543 0
Q ss_pred chHHHHHHHHHHHHHHHHHH-hhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCC
Q 007637 457 MSAMWLIPQFSLIGLAEAFN-AIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNL 535 (595)
Q Consensus 457 ~s~~~~~~~~~l~g~g~~~~-~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~ 535 (595)
.+. +..+..+..+.+.... .+..+.-..+.+| +..+..+|+.++...++++++|.+++.+.. . ++..+|
T Consensus 356 ~~~-~~a~~~l~~~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~--~t~~eW----- 425 (466)
T KOG2532|consen 356 EHR-LLAVILLTIAIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVT-D--NTREEW----- 425 (466)
T ss_pred Ccc-hHHHHHHHHHHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeC-C--CCHHHH-----
Confidence 111 2222222222333333 3333333333365 779999999999999999999999988763 1 123456
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHhhh
Q 007637 536 NKGHLDYFYWLLMAMCLVNFGYFLVCCW 563 (595)
Q Consensus 536 ~~~~~~~~f~~~~~~~l~~~v~~~~~~~ 563 (595)
..+|++.+++.+++.++|.++..
T Consensus 426 -----~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 426 -----RIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred -----HHHHHHHHHHHHHhchheeEeec
Confidence 68999999999999988888763
No 34
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.90 E-value=9.2e-22 Score=214.74 Aligned_cols=159 Identities=11% Similarity=0.040 Sum_probs=129.0
Q ss_pred HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCcc
Q 007637 54 NMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQL 133 (595)
Q Consensus 54 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 133 (595)
...+.+.+++|++..+.+++.+.+.+++.++++++|+++||+ ||||++..+.++.+++....++.. ..
T Consensus 50 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~-~~---------- 117 (467)
T PRK09556 50 AAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASL-GS---------- 117 (467)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHH-hc----------
Confidence 335567889999999999999999999999999999999996 999999998888777766655421 00
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhh
Q 007637 134 VSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQ 213 (595)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~ 213 (595)
...+...+++.|+++|++.+...|...++++|++|+++ |+++++++..+.++|.++++.+..++.
T Consensus 118 --------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-------rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 118 --------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK-------RGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred --------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc-------eeeeEEeeecccchhhhHHHHHHHHHH
Confidence 01267889999999999999999999999999999944 799999999999999999998887776
Q ss_pred ccc---chhHHHHHHHHHHHHHHHHHHhh
Q 007637 214 DHL---GWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 214 ~~~---g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
... +|+..|.+.++..++..+..++.
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHh
Confidence 543 59988888776655444444443
No 35
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.90 E-value=1.9e-21 Score=212.10 Aligned_cols=150 Identities=16% Similarity=0.181 Sum_probs=129.8
Q ss_pred hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCC
Q 007637 62 GYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSA 141 (595)
Q Consensus 62 ~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (595)
+++++..+.+++.+.+.+++.++++++|+++||+ |||+++.++.++..++.+++.++.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------------- 127 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAA--------------------- 127 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHH---------------------
Confidence 6899999999999999999999999999999995 999999999998888877765432
Q ss_pred CchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhccc-chhH
Q 007637 142 TPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHL-GWKI 220 (595)
Q Consensus 142 ~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~-g~~~ 220 (595)
..+...+++.|+++|++.+...|....++.|++|+ ++|+++.++.+.+.++|..++|.+.+++.+.+ |||.
T Consensus 128 -~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~ 199 (465)
T TIGR00894 128 -GGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPP-------KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPM 199 (465)
T ss_pred -HcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCe
Confidence 01356788999999999999999999999999998 55899999999999999999999999999884 9999
Q ss_pred HHHHHHHHHHHHHHHHHhhCc
Q 007637 221 GFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 221 ~f~~~~~~~~~~~~~~~~~~~ 241 (595)
+|++.++..++..+.++...+
T Consensus 200 ~f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 200 IFYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred ehhhhhHHHHHHHHHHHHHhc
Confidence 999988776665555544443
No 36
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.89 E-value=1.5e-20 Score=199.68 Aligned_cols=176 Identities=11% Similarity=0.144 Sum_probs=145.9
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
.++......+......+...+.++. +.+++|++.++.+++.+.+.++..++++++|+++||+ |||+++..+.++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHH
Confidence 3444555666666666666666655 5678999999999999999999999999999999996 9999999999999999
Q ss_pred HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHH
Q 007637 113 TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFN 192 (595)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (595)
.+++.++. +.+.+++.|++.|++.|...+...+++.|.+|+ ++|++.++
T Consensus 82 ~~l~~~~~------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 130 (382)
T PRK10091 82 NAMFTLSS------------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKP-------GKVTAAVA 130 (382)
T ss_pred HHHHHHhC------------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCh-------HHhhHHHH
Confidence 88887755 678899999999999998888888888888887 34788899
Q ss_pred HHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 193 WYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 193 ~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
.+..+..+|..++|.+++++.+..+||+.|++.++..++..+..++..|
T Consensus 131 ~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 131 GMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred HHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9888899999999999999999899999999988766555544444333
No 37
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.89 E-value=6.5e-21 Score=208.60 Aligned_cols=387 Identities=12% Similarity=0.095 Sum_probs=233.5
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTL 116 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~ 116 (595)
+....++..+...... ...+.+.+++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++..++
T Consensus 7 ~~~~~~~~~~~~~~~~-~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVN-VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHH
Confidence 3334444444444443 444556778999999999999999999999999999999996 99999999999999998887
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
+++. +...+++.|+++|++.+...+...+++.|.+|+ ++|+++.++++.
T Consensus 85 ~~~~------------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~ 133 (485)
T TIGR00711 85 GVAP------------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP-------EKRGRAMAIWGL 133 (485)
T ss_pred hCcC------------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH-------HHHHHHHHHHHH
Confidence 7654 677899999999999999999999999999998 558999999999
Q ss_pred HHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChh-HHHH-----HHHHHHHhhcccc
Q 007637 197 STSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLF-TSFI-----QVIVASLRKISLY 270 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~ 270 (595)
...+|..++|.+++++.+++|||+.|++.++..++..+..++..++.++++..+.+. .... ..+.....+....
T Consensus 134 ~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~ 213 (485)
T TIGR00711 134 TVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPER 213 (485)
T ss_pred HHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999887766655555444444322111111111 0000 0000111110000
Q ss_pred CCCCCccccccCCCCccCCCCchhhh---------hhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhh
Q 007637 271 PSSNTVNYYHAKDSNYVTPTDNLRFL---------NKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCS 341 (595)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 341 (595)
. ........... ....+.+++ .|.. ..+..+.|.+.......
T Consensus 214 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~---~~~~~~~~~~~~~~~~~- 264 (485)
T TIGR00711 214 G--------------WFDSNEILILSITGLVAIIAFVVWELTDD-----------NPLV---DLRLFKYRNFTIGCVYM- 264 (485)
T ss_pred C--------------CCCchHHHHHHHHHHHHHHHHHHHHHcCC-----------CCcc---CHHHHcCCChHHHHHHH-
Confidence 0 00000000000 000000000 0100 00111111111111110
Q ss_pred hhHhhhhhccccceeeeeccccCCCCCCCcc-cccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHH
Q 007637 342 TGIIILLSLNQQTFATLQAKTMDRHISPSFQ-IPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIG 420 (595)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 420 (595)
.......+....+ .+.......+ ++ ...+.......+..++..++.++ +.+|.+ +++.+.+|
T Consensus 265 -~~~~~~~~~~~~~---~p~~~~~~~g--~s~~~~g~~~~~~~~~~~~~~~~~g~----l~~r~~-------~~~~~~~g 327 (485)
T TIGR00711 265 -SLLGLGLYGSFYL---LPLYLQQVLG--YTALQAGLHILPVGLAPMLSSPIAGR----MGDKID-------PRKLVTIG 327 (485)
T ss_pred -HHHHHHHHHHHHH---HHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHHH----HHhhcC-------cHHHHHHH
Confidence 1111111111000 0000111111 00 01122223333334444444333 244433 33567777
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHH
Q 007637 421 LLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIF 500 (595)
Q Consensus 421 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~ 500 (595)
.++.++++..+.+.. ....+.+......++.|++.+...++......+..|++.+++++|+.
T Consensus 328 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 389 (485)
T TIGR00711 328 LILYAVGFYWRAFTF------------------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLS 389 (485)
T ss_pred HHHHHHHHHHHhccC------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHH
Confidence 777777766655211 01235556666788899999998888888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 007637 501 TLGMAVANLLGGLLVKIVDR 520 (595)
Q Consensus 501 ~~~~~lg~~~g~~l~~~i~~ 520 (595)
++.+.+|+.+|+.+.+.+.+
T Consensus 390 ~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 390 NFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888775
No 38
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.89 E-value=3.5e-21 Score=202.39 Aligned_cols=154 Identities=18% Similarity=0.138 Sum_probs=130.5
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCc
Q 007637 53 PNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQ 132 (595)
Q Consensus 53 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 132 (595)
..+.+++.+++|++..+.+++.+++.++..++++++|+++||+ |||+++.++.++..++.++++++.
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------------ 89 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------------ 89 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH------------
Confidence 4456777889999999999999999999999999999999995 999999999999999998888765
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHh
Q 007637 133 LVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYI 212 (595)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l 212 (595)
+...++++|++.|++.+...+.......+++|+ + |+++.++...+.++|..+++.+.+.+
T Consensus 90 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 149 (377)
T TIGR00890 90 ------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-K-------RGLASGIIIGGYGLGSFILSPLITSV 149 (377)
T ss_pred ------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-c-------cHHHHHHHHHhcchhHhHHHHHHHHH
Confidence 678899999999999998888888888888764 2 78899999988899988777677777
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHhh
Q 007637 213 QDHLGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 213 ~~~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
.+..|||+.|++.++..++..+..++.
T Consensus 150 ~~~~~~~~~f~~~~~~~~~~~~~~~~~ 176 (377)
T TIGR00890 150 INLEGVPAAFIYMGIIFLLVIVLGAFL 176 (377)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 777899999998887766555544443
No 39
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.89 E-value=4.4e-21 Score=208.07 Aligned_cols=143 Identities=18% Similarity=0.271 Sum_probs=121.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCch
Q 007637 65 VEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPA 144 (595)
Q Consensus 65 ~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (595)
.+..+.+++.+++.++..++.+++|+++||+ |||++++++.++..++..++.+... ..
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~---------------------~~ 125 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF---------------------AL 125 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc---------------------cc
Confidence 3389999999999999999999999999996 9999999999999998888765431 11
Q ss_pred hHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHH---HHhhcccchhHH
Q 007637 145 QFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTII---VYIQDHLGWKIG 221 (595)
Q Consensus 145 ~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~---~~l~~~~g~~~~ 221 (595)
+.+.+++.|+++|++.|...+...++++|.+|+ ++|+++.++++.+.++|..+++.++ +.+.+..+||+.
T Consensus 126 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~ 198 (481)
T TIGR00879 126 SVEMLIVGRVLLGIGVGIASALVPMYLSEIAPK-------ALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIP 198 (481)
T ss_pred chHHHHHHHHHHHhhhhHHHhHHHHHHHccCCh-------hhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHH
Confidence 356789999999999999999999999999998 4489999999999999999999988 666677899999
Q ss_pred HHHHHHHHHHHHHHH
Q 007637 222 FGVRAILMVLSTLMF 236 (595)
Q Consensus 222 f~~~~~~~~~~~~~~ 236 (595)
|++.++..++..+..
T Consensus 199 f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 199 LGLQLIPAGLLFLGL 213 (481)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999666555444433
No 40
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.89 E-value=1.6e-21 Score=203.31 Aligned_cols=169 Identities=22% Similarity=0.336 Sum_probs=144.0
Q ss_pred HHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007637 39 VNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWS 118 (595)
Q Consensus 39 ~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~ 118 (595)
+..++..+........++.++.+++|.+..+.+++.+.+.++..++.+++|+++||+ ||||++.++.++.+++..++.+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhh
Confidence 455666666666666777688999999999999999999999999999999999995 9999999999999998555554
Q ss_pred hcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHH
Q 007637 119 TAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAST 198 (595)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 198 (595)
+. +.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.....
T Consensus 82 ~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~ 130 (352)
T PF07690_consen 82 AS------------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE-------RGRAFGILSAGF 130 (352)
T ss_dssp HC------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC-------HHHHHHHHHHHH
T ss_pred hh------------------------hHHHHhhhccccccccccccccccccccccchhhh-------hhhccccccchh
Confidence 33 45589999999999999999999999999999944 899999999999
Q ss_pred hhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhh
Q 007637 199 SVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 199 ~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
++|.+++|.+++++.+..+|++.|++.++..++..++..+.
T Consensus 131 ~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~ 171 (352)
T PF07690_consen 131 SLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILF 171 (352)
T ss_dssp HHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhh
Confidence 99999999999999988999999999888877766543333
No 41
>PRK03699 putative transporter; Provisional
Probab=99.89 E-value=3.7e-20 Score=197.58 Aligned_cols=174 Identities=9% Similarity=0.089 Sum_probs=142.4
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
+++|..+...+..++.......+-..++. +.+++|+|..+.+++.+.+.++..++.+++|+++||+ ||||++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 45666666666666666665555555555 5678999999999999999999999999999999995 999999999998
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
..++..++.++. +...+++.|+++|++.|...+...+++.|.+|+ ++|+
T Consensus 82 ~~i~~~l~~~~~------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~-------~~r~ 130 (394)
T PRK03699 82 MILAVAGLMFSH------------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEG-------KQRG 130 (394)
T ss_pred HHHHHHHHHHcc------------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhccc-------chHH
Confidence 888888877654 577889999999999999889999999999987 3378
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhc-ccchhHHHHHHHHHHHHHHHH
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQD-HLGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~-~~g~~~~f~~~~~~~~~~~~~ 235 (595)
+..+..+...++|+.++|.+.+++.. ..|||++|.+.++..++..+.
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 131 SRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 88888888888999999998887754 579999999877665544443
No 42
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.89 E-value=2.2e-20 Score=204.26 Aligned_cols=176 Identities=10% Similarity=0.079 Sum_probs=132.6
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSS 109 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 109 (595)
+++.+.......++..+..+...+. .+++.+++|++..+.+++.+.+.++..++++++|+++||+ |||+++..+.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPL-LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 4445554444555555555544433 3466889999999999999999999999999999999995 9999999999888
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
+++.++++++. +...+++.|+++|++.+... ....++++++|+ ++|++
T Consensus 112 ~~~~~~~~~~~------------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~-------~~rg~ 159 (476)
T PLN00028 112 APAVFCMSLVS------------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNG-------KIVGT 159 (476)
T ss_pred HHHHHHHHHhc------------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcCh-------hheeH
Confidence 88887777654 56678889999999988654 345678899988 44899
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhc---------ccchhHHHHHHHHHHHHHHHHHHhh
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYIQD---------HLGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l~~---------~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
+.++.+...++|+.+++.+.+.+.. ..|||+.|++.+++.++..+..++.
T Consensus 160 a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 160 ANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887777888777766654432 2589999999887766555444443
No 43
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.89 E-value=4e-20 Score=199.80 Aligned_cols=174 Identities=15% Similarity=0.145 Sum_probs=127.3
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcC---CchhhHH---HHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYH---VEAANGA---SMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGS 106 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~---~s~~~~~---~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 106 (595)
.+....+..+++.+..+. ..++.+++.++++ .+..+.+ .+.+...++..++++++|+++||+ ||||++.++.
T Consensus 23 ~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~ 100 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISV 100 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHH
Confidence 344444456666666555 5666678888874 5555433 344455555669999999999996 9999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhh
Q 007637 107 FSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRV 186 (595)
Q Consensus 107 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (595)
+++.+++++++++++..+ ....+...+++.|+++|++.|+..|...++++|.+|+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------- 157 (432)
T PRK10406 101 CMMCFGSLVIACLPGYET----------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------- 157 (432)
T ss_pred HHHHHHHHHHhhcCCchh----------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc-------
Confidence 999999988877541110 001234578899999999999999999999999999844
Q ss_pred HhhHHHHHHHHHhhhhHHHHHHHHHhh--------cccchhHHHHHHHHHHHH
Q 007637 187 LETFFNWYYASTSVSGMLAFTIIVYIQ--------DHLGWKIGFGVRAILMVL 231 (595)
Q Consensus 187 r~~~~~~~~~~~~~g~~~~p~~~~~l~--------~~~g~~~~f~~~~~~~~~ 231 (595)
|++..++.+.+.+.|..+++++...+. ..+|||++|++.++..++
T Consensus 158 rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll 210 (432)
T PRK10406 158 KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVV 210 (432)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH
Confidence 788888888888888888876655543 257999999987665543
No 44
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.89 E-value=3.7e-20 Score=195.91 Aligned_cols=179 Identities=18% Similarity=0.129 Sum_probs=146.6
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSS 109 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 109 (595)
+.+.++......+...++.....+.++ ++.+++|.++.+.+++.+.+.++..++.+++|+++||+ ||||++..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 334444444444555555555555554 45778999999999999999999999999999999996 9999999999998
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
.++...+.++. +.+.+++.|++.|++.+...+...+++.|.+|+ ++|++
T Consensus 81 ~~~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~ 129 (385)
T TIGR00710 81 ALSSLGLALSN------------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPG-------EELSR 129 (385)
T ss_pred HHHHHHHHHHc------------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCc-------HHHHH
Confidence 88888877654 577889999999999999999999999999997 45899
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
.+++.+...++|..++|.+++++.++.+|+..|++.++..++..+..++..+
T Consensus 130 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 130 IYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999899999999887766655555444433
No 45
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.89 E-value=8.7e-21 Score=204.23 Aligned_cols=167 Identities=12% Similarity=0.163 Sum_probs=141.6
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
.+++.+.......+.+.+..+.. .....++.+++|+++.+.+++.+++.++..++++++|+++||+ |||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 44455555555555655555544 4455567889999999999999999999999999999999996 999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
.+++..+++++. +.+.+++.|++.|++.|...+...+++.|.+|+ ++|+
T Consensus 93 ~~~~~~~~~~~~------------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~-------~~r~ 141 (426)
T PRK12307 93 YSVGTGLSGLAS------------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPK-------HLKS 141 (426)
T ss_pred HHHHHHHHHHHh------------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCH-------hHhh
Confidence 999988877765 678899999999999999999999999999998 4489
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAIL 228 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~ 228 (595)
++.++...+..+|..+++.+.+.+.+..+||+.|++..+.
T Consensus 142 ~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 142 KASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 9999999999999999999999999989999999875443
No 46
>PRK09952 shikimate transporter; Provisional
Probab=99.89 E-value=2.8e-20 Score=201.37 Aligned_cols=177 Identities=11% Similarity=0.078 Sum_probs=127.6
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhc--CCchhhHHHHH-----HHHHHHHHHHHHHHHHHhhcccchhHH
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGY--HVEAANGASML-----SIWSSISNFLAIVGAFLADSYMGRFWV 101 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--~~s~~~~~~~~-----~~~~~~~~~~~~~~G~laDr~~Grr~~ 101 (595)
+++|.....+...++|.+.........+.++.+++ +.++.+ +++. ++..++..+++++.|+++||+ |||++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~ 96 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHH
Confidence 34455555556667776665554444555556554 677664 4433 344556778888999999996 99999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCc
Q 007637 102 ILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNP 181 (595)
Q Consensus 102 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~ 181 (595)
+.++.+++.+++++++++++... ........+++.|+++|++.|+..|...+++.|.+|+++
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~-- 158 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFST----------------IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK-- 158 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHH----------------HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC--
Confidence 99999999999988887651110 000012358889999999999999999999999999844
Q ss_pred chhhhHhhHHHHHHHHHhhhhHHHHHHHHHhh--------cccchhHHHHHHHHHHH
Q 007637 182 KNKRVLETFFNWYYASTSVSGMLAFTIIVYIQ--------DHLGWKIGFGVRAILMV 230 (595)
Q Consensus 182 ~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~--------~~~g~~~~f~~~~~~~~ 230 (595)
|++..+....+..+|..++..+..++. .++|||.+|++.++..+
T Consensus 159 -----rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 159 -----KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 788888888888888888877666654 35799999998766543
No 47
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.89 E-value=2.1e-20 Score=203.22 Aligned_cols=160 Identities=11% Similarity=0.017 Sum_probs=125.7
Q ss_pred HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCcc
Q 007637 54 NMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQL 133 (595)
Q Consensus 54 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 133 (595)
...+|+.++ |++..+.+++.+.+.++..++++++|+++||+ |||++++++.++.+++.+++++....
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~----------- 116 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWA----------- 116 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhcc-----------
Confidence 445577777 99999999999999999999999999999996 99999999999888888777664300
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhH-HHHHHHHHh
Q 007637 134 VSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGM-LAFTIIVYI 212 (595)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~p~~~~~l 212 (595)
..+...+++.|++.|++.|...|...+.+.+++|+ ++|++++++++.+.++|+. .+|++...+
T Consensus 117 ---------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 180 (452)
T PRK11273 117 ---------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-------KERGGIVSVWNCAHNVGGGLPPLLFLLGM 180 (452)
T ss_pred ---------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCCh-------HHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 12466788899999999999888888889999988 5589999999888888874 556544344
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 213 QDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 213 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
....|||+.|++.++..++..+..++..++
T Consensus 181 ~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~ 210 (452)
T PRK11273 181 AWFNDWHAALYMPAFAAILVALFAFAMMRD 210 (452)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 444589999998777655544444444343
No 48
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.89 E-value=8.4e-20 Score=200.49 Aligned_cols=175 Identities=14% Similarity=0.085 Sum_probs=127.3
Q ss_pred CchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhh-HHH-----HHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Q 007637 31 LRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAAN-GAS-----MLSIWSSISNFLAIVGAFLADSYMGRFWVILL 104 (595)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~-~~~-----~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~ 104 (595)
++.+....+..+++.+.+.. ..+..+++.++++.+..+ .++ +.++..++..+++++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 34455555567777765554 455666778887543322 122 24677788999999999999996 99999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchh
Q 007637 105 GSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNK 184 (595)
Q Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~ 184 (595)
+++++++++++++++++..+ .+...+..+++.|+++|++.|+..+...++++|++|+++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~----------------~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~----- 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYAT----------------IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK----- 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHH----------------HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC-----
Confidence 99999999999888651110 000012348899999999999999999999999999844
Q ss_pred hhHhhHHHHHHHHHhhhhHHHHHHHHHhh--------cccchhHHHHHHHHHHH
Q 007637 185 RVLETFFNWYYASTSVSGMLAFTIIVYIQ--------DHLGWKIGFGVRAILMV 230 (595)
Q Consensus 185 ~~r~~~~~~~~~~~~~g~~~~p~~~~~l~--------~~~g~~~~f~~~~~~~~ 230 (595)
|++..++...+..+|..+++.+..++. ..+|||++|++.++..+
T Consensus 152 --Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 152 --RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHH
Confidence 788888888777777777776554432 25799999998665443
No 49
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.88 E-value=2.3e-20 Score=193.82 Aligned_cols=344 Identities=19% Similarity=0.231 Sum_probs=248.1
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTL 116 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~ 116 (595)
.....++..+.++...+..+.|. +++|.+..+.+++.+...++..++.++.|+++||+ ||||.+.++.++..++...+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHH
Confidence 44566777777777777887776 46799999999999999999999999999999996 99999999999999998887
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
.+.. +...+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+.
T Consensus 82 ~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 130 (352)
T cd06174 82 AFAS------------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE-------RGRALGLFSA 130 (352)
T ss_pred HHhc------------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc-------hhhhhhHHHH
Confidence 7654 57889999999999999999999999999999843 8999999999
Q ss_pred HHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCCCCc
Q 007637 197 STSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTV 276 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (595)
..++|..++|.+++++.+..+|+..+++.++..++..+...+.. +...
T Consensus 131 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~------------------- 178 (352)
T cd06174 131 GFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------------RLLL------------------- 178 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------HHHH-------------------
Confidence 99999999999999999988999999988876665555443322 0000
Q ss_pred cccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccc-cce
Q 007637 277 NYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQ-QTF 355 (595)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~ 355 (595)
...+..... .......... ..+
T Consensus 179 ------------------------------------------------------~~~~~~~~~---~~~~~~~~~~~~~~ 201 (352)
T cd06174 179 ------------------------------------------------------LLALAFFLL---SFGYYGLLTYLPLY 201 (352)
T ss_pred ------------------------------------------------------HHHHHHHHH---HhHHHHHHHHHHHH
Confidence 000000000 0000000000 111
Q ss_pred eeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchH-HHHHHHHHHHHHHHHHHHH
Q 007637 356 ATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKM-RMGIGLLLSAVSMASAAVV 434 (595)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~l~~i~~~~~~~~ 434 (595)
.......+. ...+.......+...+..++.+ ++.+|.++| + .+..+.++..++.......
T Consensus 202 -~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~ 262 (352)
T cd06174 202 -LQEVLGLSA-------AEAGLLLSLFGLGGILGALLGG----LLSDRLGRR-------RLLLLIGLLLAALGLLLLALA 262 (352)
T ss_pred -HHHhcCCCH-------HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhh-------hHHHHHHHHHHHHHHHHHHHh
Confidence 000000000 1112233333444444444433 345665544 4 5677777777777766654
Q ss_pred HHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 007637 435 ENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLL 514 (595)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l 514 (595)
. +.+......++.+++.+...+....+..|..|++.|++++|+.+..+.+++.+++.+
T Consensus 263 ~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i 320 (352)
T cd06174 263 P----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLL 320 (352)
T ss_pred c----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 466777888999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHH
Q 007637 515 VKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFL 559 (595)
Q Consensus 515 ~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~ 559 (595)
.+.+.+.. ++...|.+.+++.+++.+..+
T Consensus 321 ~g~l~~~~----------------~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 321 AGLLLDTG----------------GYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHhccc----------------CcchHHHHHHHHHHHHHHHhe
Confidence 99877421 235678888888877766544
No 50
>TIGR00895 2A0115 benzoate transport.
Probab=99.88 E-value=2.8e-20 Score=197.14 Aligned_cols=180 Identities=16% Similarity=0.076 Sum_probs=144.9
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
.+|+.+.......+......... ....+++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAM-GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHH
Confidence 34555555555555555444433 3445566778999999999999999999999999999999996 999999999988
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
..++..++.+.. +...+++.+++.|++.+...+...+++.|.+|+ +.|+
T Consensus 92 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~r~ 140 (398)
T TIGR00895 92 FSVFTLLCALAT------------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPK-------RFRG 140 (398)
T ss_pred HHHHHHHHHHcc------------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCH-------Hhhc
Confidence 888887776544 567788999999999999999999999999988 4489
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
+++++.....++|..++|.+++++.+..||+..|++.++..++..+..+...+
T Consensus 141 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 193 (398)
T TIGR00895 141 TAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLP 193 (398)
T ss_pred hhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999876555544444444333
No 51
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.88 E-value=1.8e-20 Score=201.74 Aligned_cols=391 Identities=9% Similarity=0.006 Sum_probs=223.2
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+..+......++..+++..+.++++.|+.+++|+|+.+.+++.+++.++..++++++|+++||+ ||||+++++....++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4566666777888888888899999999999999999999999999999999999999999995 999999887665554
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+..........+. .......+.++.++..|...+...+...++.++.. +.++..+
T Consensus 89 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~ 143 (420)
T PRK09528 89 LFGPFFIYVFAPL--------------------LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS-----RRSGFEY 143 (420)
T ss_pred HHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH-----hhccccc
Confidence 4332211000000 00001122222233333333333333333322211 2357778
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccC
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYP 271 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (595)
+..+...++|..++|.+++++.+ .+|+.+|++.++..+++++..++..++.++++.. + ++...
T Consensus 144 g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~- 206 (420)
T PRK09528 144 GRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKV-A--------------NALGA- 206 (420)
T ss_pred hhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhh-c--------------cchhc-
Confidence 88888889999999999998876 4899999888776666555554433322111000 0 00000
Q ss_pred CCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhh-hhhHhhhhhc
Q 007637 272 SSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMC-STGIIILLSL 350 (595)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~ 350 (595)
. ++..+..+....+ +.+.++...... .....+....
T Consensus 207 -~----------------~~~~~~~~~~~~l--------------------------~~~~~~~l~l~~~~~~~~~~~~~ 243 (420)
T PRK09528 207 -N----------------ASAVSLKDALALL--------------------------KLPKFWFLVLYVIGVACFYDVFD 243 (420)
T ss_pred -c----------------cccccHHHHHHHc--------------------------cCCCeEeehHHHHHHHHHHHHHH
Confidence 0 0000000000000 011111111111 1111111111
Q ss_pred cc-cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHH
Q 007637 351 NQ-QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMA 429 (595)
Q Consensus 351 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~ 429 (595)
.+ ..+ . .....+.... . ...+.+..+..+...+..++.+ ++.+|+++| +.+..+.++.++++.
T Consensus 244 ~~~~~~-~-~~~~~~~~~~--~-~~~g~~~~~~~~~~~~~~~~~g----~l~dr~g~~-------~~~~~~~~l~~~~~~ 307 (420)
T PRK09528 244 QQFPNF-F-ASFFATPEQG--T-RVFGYLNSFQVFLEALIMFFAP----FIINRIGAK-------NALLLAGTIMAVRII 307 (420)
T ss_pred HHHHHH-H-HHHHhccCcc--h-HHHHHHHHHHHHHHHHHHHHHH----HHHHHhCcc-------hhhHHHHHHHHHHHH
Confidence 11 111 0 0100011110 0 0011222223333333333333 346665555 456677777777766
Q ss_pred HHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHH-HHHHHHHHH
Q 007637 430 SAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAI-FTLGMAVAN 508 (595)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl-~~~~~~lg~ 508 (595)
.+++.+ +.++++...++.+++.....+....++.+..|++.+++..++ +++...+|.
T Consensus 308 l~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~ 365 (420)
T PRK09528 308 GSGFAT----------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGA 365 (420)
T ss_pred HHHhcc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHH
Confidence 665533 556666777888888888888888999999999999988766 677889999
Q ss_pred HHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 007637 509 LLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCC 562 (595)
Q Consensus 509 ~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~ 562 (595)
.+++.+.|.+.+.. + +...|.+.+++.++..++.+...
T Consensus 366 ~ig~~~~G~l~~~~------G----------~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 366 VFLSTLAGNLYDSI------G----------FQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HHHHHHHHHHHHhh------C----------chHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988643 2 35678887877777665555443
No 52
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.88 E-value=8.9e-20 Score=200.94 Aligned_cols=182 Identities=13% Similarity=0.042 Sum_probs=134.7
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhh----hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Q 007637 28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMN----GYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVIL 103 (595)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~----~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~ 103 (595)
+.+++.+....+..+.+.+....+....+..-.+ +.+.+..+.+++.+.+.++..++.+++|+++||+ |||+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~ 90 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYG 90 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHH
Confidence 3444555445555566655544444434432221 1345666778999999999999999999999996 9999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcch
Q 007637 104 LGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKN 183 (595)
Q Consensus 104 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (595)
++.++..++.++++++.+.. ...+...++++|+++|++.|+..+....++.|.+|+
T Consensus 91 ~~~~~~~v~~~~~~~~~~~~------------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~------ 146 (502)
T TIGR00887 91 MELIIMIIATVASGLSPGSS------------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATK------ 146 (502)
T ss_pred HHHHHHHHHHHHHHHccCcc------------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCh------
Confidence 99999999888777643100 001367899999999999999999999999999999
Q ss_pred hhhHhhHHHHHHHHHhhhhHHHHHHHHHhhc-----------------------ccchhHHHHHHHHHHHHHHHH
Q 007637 184 KRVLETFFNWYYASTSVSGMLAFTIIVYIQD-----------------------HLGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 184 ~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~-----------------------~~g~~~~f~~~~~~~~~~~~~ 235 (595)
+.|+++.++.+....+|..+++.+..++.. .++||++|.+.++..++..+.
T Consensus 147 -~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~ 220 (502)
T TIGR00887 147 -KWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF 220 (502)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH
Confidence 558999999999999999998888765432 247999998776655444333
No 53
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=1.2e-19 Score=193.62 Aligned_cols=178 Identities=12% Similarity=0.108 Sum_probs=126.2
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHH-HHHHHHHHHHHHhhcccchhHHHH-HHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSS-ISNFLAIVGAFLADSYMGRFWVIL-LGSFSSLL 111 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~-~~~~~~~l 111 (595)
.+..++..++.+++...+.+.++.|+.+++|+++++.+++.+...+ +..++++++|+ +||+ ||||.++ .+.+..++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGVL 94 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHHH
Confidence 3445556888888888889999999999999999999999876655 55566666666 9996 9998754 44555556
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+..+.+++. +.+.+++.+.+.+...+...|...++..|..++++ +..+...
T Consensus 95 ~~~~~~~~~------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 145 (393)
T PRK15011 95 ACTLFAWNR------------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG-----REAVMFS 145 (393)
T ss_pred HHHHHHHhh------------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc-----chHHHHH
Confidence 555555543 45555544444444445667777777777665432 1123445
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
++.+.+.++|.+++|.+++++.+++|||..|++.++..++..+..++..|+
T Consensus 146 ~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 196 (393)
T PRK15011 146 SFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPS 196 (393)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 677788899999999999999999999999998877666555554444443
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.88 E-value=4.6e-19 Score=189.67 Aligned_cols=169 Identities=10% Similarity=0.110 Sum_probs=135.7
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSS 109 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 109 (595)
.+|.+.......++...+.+....+++.++ +++|+++.+.+++.+.+.++..++.+++|+++||+ ||||++..+.++.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~~ 88 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLLW 88 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHH
Confidence 346666667777777777777778888887 56899999999999999999999999999999996 9999999999988
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
.++.+++...... ..+...+++.|++.|++.+...+...+.+.+.+|+ ++|++
T Consensus 89 ~~~~~~~~~~~~~--------------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~-------~~~g~ 141 (402)
T TIGR00897 89 CVGHAAFIVFGLG--------------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQ-------DNLSS 141 (402)
T ss_pred HHHHHHHHHHhcc--------------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCH-------HHHHH
Confidence 8887654321100 01467778899999999888777777888888888 44899
Q ss_pred HHHHHHHHHhhhh-HHHHHHHHHhhcccchhHHHHHHHH
Q 007637 190 FFNWYYASTSVSG-MLAFTIIVYIQDHLGWKIGFGVRAI 227 (595)
Q Consensus 190 ~~~~~~~~~~~g~-~~~p~~~~~l~~~~g~~~~f~~~~~ 227 (595)
+.++++...++|. .++|.+++++.+..||+..++....
T Consensus 142 ~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 142 AVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 9999999999986 6899999999888887666554433
No 55
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.88 E-value=1.1e-19 Score=192.96 Aligned_cols=157 Identities=12% Similarity=0.028 Sum_probs=135.3
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|.++.++...++..++.....+.++.|+. ++|.|..+.+++.+.+.++..+++++.|+++||+ ||||++..+.++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 45777778888888888888888888876 6899999999999999999999999999999995 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+...+.+++ +.+.+++.|+++|++.+...|...+.+.+..++ +.|++.+
T Consensus 84 ~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 132 (381)
T PRK03633 84 GCAGLGLMV------------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTS-------RNRGRLL 132 (381)
T ss_pred HHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHHHHH
Confidence 888777654 678889999999999999888887777887776 3489999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHH
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIG 221 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~ 221 (595)
+++....++|..+||.+++++.+...|...
T Consensus 133 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 162 (381)
T PRK03633 133 AAYMMVYYLGTVLGQLLVSKVSTELMSVLP 162 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccchHH
Confidence 999999999999999999988775433333
No 56
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.88 E-value=1e-19 Score=200.01 Aligned_cols=168 Identities=11% Similarity=0.132 Sum_probs=142.6
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF 107 (595)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 107 (595)
+.+|+.+..+....++..+...... .+..++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLIT-LVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 3556655555556666666655544 444566788999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
+.+++.+++.+.. +...+++.|++.|++.+...+...+++.|.+|+ ++|
T Consensus 94 ~~~~~~~~~~~~~------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~r 142 (496)
T PRK03893 94 LFSVGTLACGFAP------------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPK-------HLR 142 (496)
T ss_pred HHHHHHHHHHHHh------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH-------HHH
Confidence 9999888877754 678899999999999999999999999999998 558
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAIL 228 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~ 228 (595)
++..++.+...++|..++|.+.+++.++++||+.|++..+.
T Consensus 143 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 143 NKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999875443
No 57
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.87 E-value=1.8e-19 Score=192.12 Aligned_cols=177 Identities=16% Similarity=0.176 Sum_probs=143.9
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
+.+|.++.......+.........+.++. +.+++|+|+.+.+++.+.+.++..++.+++|+++||+ ||||++..+.+.
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIAD-MARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 45677777777666666666655555554 4678999999999999999999999999999999996 999999999998
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
..++..++.++. +...+++.|++.|++.+...+....+..|.++. ++++
T Consensus 83 ~~~~~~~~~~~~------------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~ 131 (394)
T PRK11652 83 FILGTLVALFAH------------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEG-------TQLR 131 (394)
T ss_pred HHHHHHHHHHHc------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCH-------HHHH
Confidence 888887776644 577889999999999888777777888888776 3378
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
++.++...+..++..++|.+++++.+..|||+.|++.++..++..+...+
T Consensus 132 ~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK11652 132 HANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMAR 181 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHH
Confidence 88888888889999999999999998899999999877655544433333
No 58
>TIGR00898 2A0119 cation transport protein.
Probab=99.87 E-value=4.4e-20 Score=203.38 Aligned_cols=145 Identities=15% Similarity=0.150 Sum_probs=125.6
Q ss_pred HHhhhhcCCc---hhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCcc
Q 007637 57 FYLMNGYHVE---AANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQL 133 (595)
Q Consensus 57 ~yl~~~l~~s---~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 133 (595)
.-+.++++++ ..+.++..+++.++..++.++.|+++||+ |||++++++.++..++.++.+++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~------------- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP------------- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 3456789999 89999999999999999999999999995 999999999999988888877655
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhh
Q 007637 134 VSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQ 213 (595)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~ 213 (595)
+++.+++.|++.|++.+...+...+++.|.+|+ ++|+...++...+..+|.+++|.++.++.
T Consensus 179 -----------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 240 (505)
T TIGR00898 179 -----------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPK-------KQRAIVGTLIQVFFSLGLVLLPLVAYFIP 240 (505)
T ss_pred -----------cHHHHHHHHHHHHhhccchHHHHHHHhheecCh-------hhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 678899999999999999999999999999998 44888888888888899999998876665
Q ss_pred cccchhHHHHHHHHHHHHHHHHH
Q 007637 214 DHLGWKIGFGVRAILMVLSTLMF 236 (595)
Q Consensus 214 ~~~g~~~~f~~~~~~~~~~~~~~ 236 (595)
+ ||+.|++.++..++..+..
T Consensus 241 ~---wr~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 241 D---WRWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred H---HHHHHHHHHHHHHHHHHHH
Confidence 3 9999998877666555544
No 59
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.87 E-value=3.7e-19 Score=189.08 Aligned_cols=361 Identities=10% Similarity=-0.039 Sum_probs=225.1
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH----HHHHHHHH
Q 007637 35 PFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVI----LLGSFSSL 110 (595)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~----~~~~~~~~ 110 (595)
+.+....++...++....++++.|+. ++|+|..+.+++.+++.+...+++++.|+++||+ ||++.. .++..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 33444556666666667788889985 6899999999999999999999999999999996 985433 22222222
Q ss_pred HHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhH
Q 007637 111 LGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETF 190 (595)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (595)
+ ..+..++ +++.+++.|++++.+.+...|...++..+. . ++|++.
T Consensus 85 ~--~~~~~~~------------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~-------~~~~~~ 129 (382)
T TIGR00902 85 A--AFSAGAH------------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW--Q-------KQFGLD 129 (382)
T ss_pred H--HHHHhhh------------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH--H-------HHcCCC
Confidence 1 1122222 578888999999999888888888876543 2 237888
Q ss_pred HHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhcccc
Q 007637 191 FNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLY 270 (595)
Q Consensus 191 ~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (595)
++......++|.+++|.+++++.+++|||..|++.++...+..+ .+...++.++++ +++.
T Consensus 130 ~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~------------------ 189 (382)
T TIGR00902 130 YGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTIPPKD-AIPE------------------ 189 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCCCCCc-cccc------------------
Confidence 99999999999999999999999999999999876654332222 222222110100 0000
Q ss_pred CCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhc
Q 007637 271 PSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSL 350 (595)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 350 (595)
+ + ..+..+ ..++.+.|.++..... ..+.....
T Consensus 190 --~--------~------~~~~~~-----------------------------~~~~l~~~~~~~~l~~---~~l~~~~~ 221 (382)
T TIGR00902 190 --D--------E------SQGDSA-----------------------------FIALLKNPMNLRFLAA---VCLIQGAH 221 (382)
T ss_pred --c--------c------cccchh-----------------------------HHHHHcChHHHHHHHH---HHHHHHHH
Confidence 0 0 000000 0011111222222111 11111111
Q ss_pred cc-cce-eeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHH
Q 007637 351 NQ-QTF-ATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSM 428 (595)
Q Consensus 351 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~ 428 (595)
.. .++ ..+.. + .+ .+...+.....+ ..+.+.+...+.+|+.+| .++++.+.++.++.++.+
T Consensus 222 ~~~~~~~~~~l~---~--~g----~s~~~~g~l~~~-----~~~~~i~~~~~~~~l~~r---~g~~~~l~~~~~~~~~~~ 284 (382)
T TIGR00902 222 AAYYGFSAIYWQ---A--AG----ISASATGLLWGI-----GVLAEIIIFAFSNKLFQN---CSARDLLLISAIACVGRW 284 (382)
T ss_pred HHHHHHHHHHHH---H--CC----CCHhHHHHHHHH-----HHHHHHHHHHHhHHHHhh---CCHHHHHHHHHHHHHHHH
Confidence 11 111 11111 1 11 222222222211 111111222234444444 566678888999888888
Q ss_pred HHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHH-HHHHHH
Q 007637 429 ASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFT-LGMAVA 507 (595)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~-~~~~lg 507 (595)
..+++.+ +.+.++...++.++..++..+....++.+. |++.+++++++++ +..++|
T Consensus 285 ~~~~~~~----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g 341 (382)
T TIGR00902 285 AIIGAIE----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGL 341 (382)
T ss_pred HHHHhHh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHH
Confidence 8777644 667777788999999999999999999988 9999999999986 567899
Q ss_pred HHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHH
Q 007637 508 NLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGY 557 (595)
Q Consensus 508 ~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~ 557 (595)
..+|+.+.|.+.+..+ ...|++.++++++++++
T Consensus 342 ~~~g~~~~G~l~~~~g-----------------~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 342 IAIFTAFAGFIYPTLG-----------------AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHhcc-----------------HHHHHHHHHHHHHHHHH
Confidence 9999999999886431 24677788877766543
No 60
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.87 E-value=5.1e-22 Score=210.29 Aligned_cols=364 Identities=32% Similarity=0.487 Sum_probs=232.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCC
Q 007637 100 WVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKD 179 (595)
Q Consensus 100 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 179 (595)
|+++++.+++.+|++++.++...+. ..+..+...++++..++++|.|+..|++.++++|++++++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~---------------~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~ 66 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPS---------------LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD 66 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSS---------------C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcch---------------hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc
Confidence 7889999999999999777762222 1123356789999999999999999999999999999875
Q ss_pred CcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcccccc-CCCCChhHH-HH
Q 007637 180 NPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKV-QPDKSLFTS-FI 257 (595)
Q Consensus 180 ~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 257 (595)
+ +.|.++++++|++.|+|..+++.+.+++.+++||.+.|.++++..+++++.++..++++.+. ++.++...+ ..
T Consensus 67 ~----~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~ 142 (372)
T PF00854_consen 67 D----SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIK 142 (372)
T ss_dssp T----THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SH
T ss_pred h----hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHH
Confidence 4 55899999999999999999999999999999999999999999999999999988887666 555565555 23
Q ss_pred HHHHHHHhhccccCCCCCcccccc-CCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCcc-ccchhhhhhhHHHh
Q 007637 258 QVIVASLRKISLYPSSNTVNYYHA-KDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKL-CSIGQVESLKALLR 335 (595)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 335 (595)
.++....+......+......... ........................ ...|.. +..++++..+.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~k~~~~ 212 (372)
T PF00854_consen 143 LVLVAAFKKRKLAVPKGSSWLDWALFQYSERSIFGIIVFIRAAVIFFPE----------IFFWALFCQVQRVEELKALIR 212 (372)
T ss_dssp HHHHHHHHHHCCCH-HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC----------HHHHTTTSSTTTHHHCCHHHC
T ss_pred HHHHHHHHHhhcccccchHHHHHhhhhhhhhhhhhhhhhccchhhhhhh----------hhhcccCCccceeeeeeeeee
Confidence 333333333333222111100000 000000000000000000000000 000100 22345566777777
Q ss_pred HHhhhhhhHhhhhhccc-cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCch
Q 007637 336 ITPMCSTGIIILLSLNQ-QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPK 414 (595)
Q Consensus 336 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (595)
.++.+...+.+...+.+ +.+...+...+++...+.+++|++.+++++.+.++++.|+++++.+|+.+ .+++ .++.
T Consensus 213 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~-~~~~---~~~~ 288 (372)
T PF00854_consen 213 FLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLR-RGIQ---PSPP 288 (372)
T ss_dssp HHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTT-T---------H
T ss_pred ccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhh-hccc---chhh
Confidence 78888777777777777 55556666666666664488999999999999999999999999999888 3333 7888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhh
Q 007637 415 MRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSS 494 (595)
Q Consensus 415 ~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg 494 (595)
.++.+|++++.+++...+....+|......++. .+.+|.+..+++..++|.+..+...+..+|.+|++..+
T Consensus 289 ~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~~---------~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~ 359 (372)
T PF00854_consen 289 QKFGIGMVFAILAMFVAAIVEIRRLCYAQPCGK---------VSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPS 359 (372)
T ss_dssp HHHHHH-HHHHHHHHTTTHHHH---HH----TT-----------THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SS
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhhcccccCC---------CChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhH
Confidence 899999999999888887766444333333331 34478789999999999999999999888888888888
Q ss_pred HHHHHHHHHHH
Q 007637 495 MAMAIFTLGMA 505 (595)
Q Consensus 495 ~~~gl~~~~~~ 505 (595)
..+|+++....
T Consensus 360 ~m~~~~~~~~~ 370 (372)
T PF00854_consen 360 SMMGIWFALSA 370 (372)
T ss_dssp SSTHHHHHHH-
T ss_pred HHHHHHHHHhc
Confidence 88888776543
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.87 E-value=2.3e-19 Score=191.41 Aligned_cols=162 Identities=20% Similarity=0.210 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGT 113 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~ 113 (595)
.+.+....++..++.......++.. .+++|.++.+.+++.+.+.+...++.+++|+++||+ ||||+++++.++.+++.
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHH
Confidence 3344556666666554444444444 578999999999999999999999999999999996 99999999999988887
Q ss_pred HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH
Q 007637 114 TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193 (595)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (595)
+.+.+.. + .++.|+++|++.+...|+..+++.|++|+ ++|+++.++
T Consensus 83 ~~~~~~~------------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~-------~~~~~a~~~ 128 (393)
T PRK11195 83 LLMLFGI------------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPG-------EKLVKANGW 128 (393)
T ss_pred HHHHHHH------------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCH-------HHHHHHHHH
Confidence 7765533 2 26789999999999999999999999998 458999999
Q ss_pred HHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 194 YYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLS 232 (595)
Q Consensus 194 ~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~ 232 (595)
.....++|.++||.++|++.+. .|+..+.+.+...+++
T Consensus 129 ~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 129 MEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999885 4777776665544433
No 62
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.87 E-value=4.1e-19 Score=190.73 Aligned_cols=152 Identities=11% Similarity=0.122 Sum_probs=131.0
Q ss_pred hhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCC
Q 007637 59 LMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNC 138 (595)
Q Consensus 59 l~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (595)
+.+++|.+.++.++..+++.++..++++++|+++||+ |||++++.+.++..++.+++.++.
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 6778999999999999999999999999999999995 999999999999999888887654
Q ss_pred CCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccch
Q 007637 139 SSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGW 218 (595)
Q Consensus 139 ~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~ 218 (595)
+...++++|+++|++.+...+...+++.|.+|+ ++|++.+++.....++|..++|++++++.++.||
T Consensus 103 ------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw 169 (413)
T PRK15403 103 ------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQ-------TKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHW 169 (413)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 678899999999999887666677888888888 4478899999999999999999999999988999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 219 KIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 219 ~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
|+.|++.++..+++.+..++..|+
T Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999998887766665554444443
No 63
>PRK11043 putative transporter; Provisional
Probab=99.87 E-value=5.4e-19 Score=188.90 Aligned_cols=162 Identities=19% Similarity=0.155 Sum_probs=132.3
Q ss_pred HHHhhhchHHHHHH--hhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccc
Q 007637 45 KVASYGLLPNMIFY--LMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMI 122 (595)
Q Consensus 45 ~~~~~~~~~~l~~y--l~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~ 122 (595)
..+++....+.|.+ +.+++|.++.+.+++.+++.++..++.+++|+++||+ |||+++..+.++..++...+.+..
T Consensus 16 ~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~-- 92 (401)
T PRK11043 16 MLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE-- 92 (401)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc--
Confidence 33334433444433 6788999999999999999999999999999999996 999999999988888887777644
Q ss_pred CCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhh
Q 007637 123 PQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSG 202 (595)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 202 (595)
+.+.+++.|+++|++.+...+...+++.|.+++ +++++.++......+++.
T Consensus 93 ----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 143 (401)
T PRK11043 93 ----------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPA-------QKANRVFATIMPLVALSP 143 (401)
T ss_pred ----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-------HHHHHHHHHHHHHHHHHH
Confidence 577788999999999888777788889999987 336777888777888999
Q ss_pred HHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 203 MLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 203 ~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
.++|.+++++.+++||++.|++.++..++..+..++
T Consensus 144 ~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 144 ALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887766655544433
No 64
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.86 E-value=1e-19 Score=196.94 Aligned_cols=160 Identities=13% Similarity=0.032 Sum_probs=128.6
Q ss_pred HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCcc
Q 007637 54 NMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQL 133 (595)
Q Consensus 54 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 133 (595)
...+++++ +|+++++.+++.+++.++..++.++.|+++||+ |||+++..+.++.+++...+.+....
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~----------- 114 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWA----------- 114 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccc-----------
Confidence 34456665 599999999999999999999999999999995 99999999988888887776543210
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhh
Q 007637 134 VSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQ 213 (595)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~ 213 (595)
..+...+++.|++.|++.|...+.....+.|++|+++ |++++++++...++|+.++|.+.+.+.
T Consensus 115 ---------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~-------rg~~~~~~~~~~~~g~~~~~~l~~~~~ 178 (438)
T TIGR00712 115 ---------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE-------RGTIVSIWNCAHNIGGGIPPLLVLLGM 178 (438)
T ss_pred ---------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc-------chhHHHHHHHHHHhHhHHHHHHHHHHH
Confidence 1145677888999999999998988999999999844 899999999999999999988777544
Q ss_pred -cccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 214 -DHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 214 -~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
.+.+||..|++.++..++..+..++..++
T Consensus 179 ~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 179 AWFNDWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 45789999999887766655544444443
No 65
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=4.5e-19 Score=189.28 Aligned_cols=386 Identities=11% Similarity=0.025 Sum_probs=228.2
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
..|......++...++..+.++++.|+++++|+++.+.+++.+++.++..++++++|+++||+ ||||.++.+.+..+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVL 81 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 455566677777788888889999999999999999999999999999999999999999996 9999998877666554
Q ss_pred HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHH
Q 007637 113 TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFN 192 (595)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (595)
..........+.. .......+++.+++.+++.+...+...++..|..++ ++..++
T Consensus 82 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~~g 136 (396)
T TIGR00882 82 FAPFFIYVFGPLL----------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN---------SNFEYG 136 (396)
T ss_pred HHHHHHHHhhhHH----------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh---------cccccc
Confidence 4332211100000 000223456677888888888888887776553222 345667
Q ss_pred HHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCC
Q 007637 193 WYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPS 272 (595)
Q Consensus 193 ~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (595)
......++|.+++|.+++.+.+ .+|+.+|++.+++.++..+..+...++.++++.. ++..+.
T Consensus 137 ~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~- 198 (396)
T TIGR00882 137 KARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATV----------------ANALGA- 198 (396)
T ss_pred hhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhh----------------hccccc-
Confidence 7777889999999999988765 5999999988776665554443333221110000 000000
Q ss_pred CCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccc
Q 007637 273 SNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQ 352 (595)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 352 (595)
+ + ...+.. +.. +..+.|.++........ ....+.+
T Consensus 199 ~--------~-----~~~~~~---~~~--------------------------~~l~~~~~~~~~l~~~~---~~~~~~~ 233 (396)
T TIGR00882 199 N--------A-----SAFSLK---LAL--------------------------ELFRQRKFWMFVLYVVG---VACVYDV 233 (396)
T ss_pred c--------c-----CCCCHH---HHH--------------------------HHHcCCcHHHHHHHHHH---HHHHHHH
Confidence 0 0 000000 000 01111222222111111 1111111
Q ss_pred --cceeeeeccccCC-CCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHH
Q 007637 353 --QTFATLQAKTMDR-HISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMA 429 (595)
Q Consensus 353 --~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~ 429 (595)
..+..+....... ... . ...+.......+...+.... ..++.+|.++| +.+.++.++.++.+.
T Consensus 234 ~~~~~~~y~~~~~~~~~~~--~-~~~g~~~~~~~i~~~~~~~~----~g~l~~r~g~~-------~~l~~~~~l~~l~~~ 299 (396)
T TIGR00882 234 FDQQFANFFTSFFATPQQG--T-RVFGYVTTMGELLNALIMFC----APLIINRIGAK-------NALLIAGTIMSVRII 299 (396)
T ss_pred HHHHHHHHHHHhccccccc--h-HHHHHHHHHHHHHHHHHHHH----HHHHHHHhccc-------hhHHHHHHHHHHHHH
Confidence 1111111111111 100 0 00111222222222222222 23345665544 466777777777665
Q ss_pred HHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHH-HHHHHHHHH
Q 007637 430 SAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAI-FTLGMAVAN 508 (595)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl-~~~~~~lg~ 508 (595)
...... +.+++.+..++.+++..........+..+..|++.+++..+. ++....+|+
T Consensus 300 ~~~~~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~ 357 (396)
T TIGR00882 300 GSSFAT----------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAM 357 (396)
T ss_pred HHHhcC----------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHH
Confidence 544322 566667777888888777777777788888999999887776 678899999
Q ss_pred HHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHH
Q 007637 509 LLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFL 559 (595)
Q Consensus 509 ~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~ 559 (595)
.+++.+.|.+.+.. ++...|.+.+++.++..+...
T Consensus 358 ~~~~~l~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 358 IFLSTLAGNMYDSI----------------GFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHhHHHHHHhc----------------ccHHHHHHHHHHHHHHHHHHH
Confidence 99999999988643 245677777777766655443
No 66
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=2.2e-18 Score=188.57 Aligned_cols=358 Identities=15% Similarity=0.117 Sum_probs=229.6
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSS 109 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 109 (595)
.+|.+|. .+.+.+++.+....-++-++. ++.-|+...+++..+..+-..+..+++|.++||+ .|||+++.+-++.
T Consensus 11 ~Fr~lw~---a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~ 85 (524)
T PF05977_consen 11 NFRRLWI---AQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLR 85 (524)
T ss_pred hHHHHHH---HHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHH
Confidence 3444444 555556665554444444433 5677888999999999999999999999999996 9999999998877
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
++...++++..... ..+.+.+++.-++.|++.+...|+.++++.+..|+++ ...
T Consensus 86 ~~~~~~L~~l~~~~-------------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~-------L~~ 139 (524)
T PF05977_consen 86 ALVALLLAVLAFFG-------------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED-------LPA 139 (524)
T ss_pred HHHHHHHHHHHHhC-------------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh-------HHH
Confidence 76665554432111 1257888888999999999999999999999999844 788
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccc
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISL 269 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (595)
+.++.....|+..++||.++|.+....|-.+.|.+.++..++..+.+...+++..+++. +.....+.++..++
T Consensus 140 A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~---~~e~~~~~l~~G~r---- 212 (524)
T PF05977_consen 140 ANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSL---PRERFFSALREGLR---- 212 (524)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc---chhhhhhhHHHHHH----
Confidence 99999999999999999999999998899999998887766655544443332211111 10111111111111
Q ss_pred cCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhh
Q 007637 270 YPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLS 349 (595)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 349 (595)
+ +.+.+.+...+.. ..++...
T Consensus 213 -------------------------y-------------------------------v~~~~~l~~~l~~---~~~~~l~ 233 (524)
T PF05977_consen 213 -------------------------Y-------------------------------VRSSPPLRSVLLR---SFLFNLF 233 (524)
T ss_pred -------------------------H-------------------------------HhcchHHHHHHHH---HHHHHHh
Confidence 0 0000111111110 0011110
Q ss_pred ccc--cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHH
Q 007637 350 LNQ--QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVS 427 (595)
Q Consensus 350 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~ 427 (595)
... ..++++....++ .+...+....+ ....+.+++-++.+.+++ + .+..+.+..+.++.+++
T Consensus 234 ~~a~~aLlPl~a~~~l~--------~~a~~yGll~a--~~gvGai~Gal~~~~l~~---~---~~~~~lv~~~~~~~a~~ 297 (524)
T PF05977_consen 234 ASAVWALLPLFARDVLG--------GGASGYGLLLA--AFGVGAILGALLLPRLRR---R---LSSRRLVLLASLLFALA 297 (524)
T ss_pred hhHHHHhhhHHHHHHhC--------CcHHHHHHHHH--HHHHHHHHHHHHHHHhhc---c---cCcchhhHHHHHHHHHH
Confidence 000 111111111111 11222222221 111222223333332332 2 34445677777777777
Q ss_pred HHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHH
Q 007637 428 MASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVA 507 (595)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg 507 (595)
++.+++.. +.+..++.+++.|++....++...+...+..|+++||++++++++....+
T Consensus 298 ~~~lal~~----------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~ 355 (524)
T PF05977_consen 298 LLLLALSP----------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGG 355 (524)
T ss_pred HHHHhcch----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHH
Confidence 77776644 66777778889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 007637 508 NLLGGLLVKIVDRVT 522 (595)
Q Consensus 508 ~~~g~~l~~~i~~~~ 522 (595)
..+|..+.|.+.+..
T Consensus 356 ~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 356 MPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988654
No 67
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.85 E-value=2.3e-18 Score=183.43 Aligned_cols=169 Identities=19% Similarity=0.151 Sum_probs=137.8
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWST 119 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~ 119 (595)
..+....+.....+.++ .+.+++|.+..+.++..+++.++..+++++.|+++||+ |||++++.+.++..++...+...
T Consensus 11 ~~~~~~~~~~~~~~~lp-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~~ 88 (392)
T PRK10473 11 LVLLYPAGIDMYLVGLP-RIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSLA 88 (392)
T ss_pred HHHHHHHHHHHHhhhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHHh
Confidence 34444444444444444 45678999999999999999999999999999999996 99999999999988888877664
Q ss_pred cccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHh
Q 007637 120 AMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTS 199 (595)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 199 (595)
. +...+++.|+++|++.+...+...+++.|.+|+ ++|++..++.+...+
T Consensus 89 ~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~ 137 (392)
T PRK10473 89 E------------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDD-------RRRAKVLSLLNGITC 137 (392)
T ss_pred C------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCH-------HHHHHHHHHHHHHHH
Confidence 4 567788899999999999888899999999988 458999999998889
Q ss_pred hhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 200 VSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 200 ~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
++..++|.+++++.+..||++.|++.++..++..+..++..+
T Consensus 138 i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 179 (392)
T PRK10473 138 IIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILK 179 (392)
T ss_pred HHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999888889999999887766555554444333
No 68
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.85 E-value=6.4e-20 Score=192.91 Aligned_cols=156 Identities=15% Similarity=0.148 Sum_probs=133.6
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCc
Q 007637 53 PNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQ 132 (595)
Q Consensus 53 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 132 (595)
....+++.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++.++.++..++.+++.++.
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 81 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------ 81 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh------------
Confidence 3344577889999999999999999999999999999999996 999999999999999988887755
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHH-HHHHH
Q 007637 133 LVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAF-TIIVY 211 (595)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p-~~~~~ 211 (595)
+.+.+++.|++.|++.+...+...+++.|.+|+ ++|+++.++.....++|..++| ++.+.
T Consensus 82 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 142 (379)
T TIGR00881 82 ------------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSR-------SERGTWVSFWNCSHNVGGGLLPPLVLFG 142 (379)
T ss_pred ------------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCH-------hhheeeEeehhccchhHHHHHHHHHHHH
Confidence 678899999999999999999999999999998 4489999999999999999999 57777
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHhhC
Q 007637 212 IQDHLGWKIGFGVRAILMVLSTLMFLFGS 240 (595)
Q Consensus 212 l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 240 (595)
+.+..+|++.|++.+++.++..+..++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T TIGR00881 143 IAELYSWHWVFIVPGIIAIIVSLICFLLL 171 (379)
T ss_pred HHhcCCchhHHHHHHHHHHHHHHHHheee
Confidence 77788999999887766655444444433
No 69
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=8.7e-21 Score=195.67 Aligned_cols=182 Identities=15% Similarity=0.214 Sum_probs=159.4
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF 107 (595)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 107 (595)
+..++.+..+.+++.++...=|.+-. ...-.++.+|++++..|++.+.+.+.+.++.|++|+++||+ .||+++.+|..
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHH
Confidence 34456677777788888777776644 33445778999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
++.++.+...++. .++.+.+.|.+.|+|.+.+.|..+++++|.+|+. +|
T Consensus 107 iW~~Av~~~~fs~------------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~-------~R 155 (493)
T KOG1330|consen 107 IWTLAVFASGFSN------------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD-------KR 155 (493)
T ss_pred HHHHHHHHHHHHH------------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcch-------hh
Confidence 9999999998875 7999999999999999999999999999999994 48
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDHLG-WKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
++.++++|++.++|.++|.++++.+.+..+ ||+.|...+++.+++.++.+++.++
T Consensus 156 s~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 156 SRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred hHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccC
Confidence 999999999999999999999999988766 9999999998888777776665544
No 70
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.85 E-value=1.1e-18 Score=186.73 Aligned_cols=181 Identities=9% Similarity=0.043 Sum_probs=133.3
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhh-hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMN-GYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSL 110 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 110 (595)
|.++..... +.-.+..+...+.+...+.+ ++|+|.+|.+++.+++.+++.++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~s~~~-f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSC-LLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 555554444 33344444444455555554 7999999999999999999999999999999996 99999999999998
Q ss_pred HHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhH
Q 007637 111 LGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETF 190 (595)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (595)
+.+..++++... ...++..+++.|++.|++ |..++.....+++++|+ ++||++
T Consensus 112 i~~~~~~~a~~~-------------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~-------~~rG~A 164 (462)
T PRK15034 112 IPCVWLGIAVQN-------------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPK-------AKQGSA 164 (462)
T ss_pred HHHHHHHHHHcc-------------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCH-------hHhHHH
Confidence 888887764100 012688899999999998 67889999999999999 458999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHhh-----c-------------ccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 191 FNWYYASTSVSGMLAFTIIVYIQ-----D-------------HLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 191 ~~~~~~~~~~g~~~~p~~~~~l~-----~-------------~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
.+++....|+|..+++++.+.+. . ..+|+.+.++..+..++..+..++..+
T Consensus 165 ~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 165 LGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99987667777766666554432 2 234777777766666555555555433
No 71
>PRK15075 citrate-proton symporter; Provisional
Probab=99.85 E-value=2.9e-18 Score=185.44 Aligned_cols=171 Identities=16% Similarity=0.116 Sum_probs=121.6
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHH-HHHHH-----HHHHHHHHHHHHHhhcccchhHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASM-LSIWS-----SISNFLAIVGAFLADSYMGRFWVILLG 105 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~-~~~~~-----~~~~~~~~~~G~laDr~~Grr~~~~~~ 105 (595)
+......+..+++.+....+ ....+.+.++++.++.+.+.. .+... +...+++++.|+++||+ ||||+++.+
T Consensus 15 ~~~~~~~~~~~~~~~d~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~ 92 (434)
T PRK15075 15 RAILRVTSGNFLEMFDFFLF-GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIVT 92 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHHH
Confidence 33444444555555544443 455567788899888775443 33222 22246789999999996 999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhh
Q 007637 106 SFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKR 185 (595)
Q Consensus 106 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 185 (595)
.++..++.++++++++...+ .......++++|+++|++.|...+...++++|++|+++
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~----------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------ 150 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATI----------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------ 150 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHH----------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------
Confidence 99999999888876511100 00001257899999999999999999999999999844
Q ss_pred hHhhHHHHHHHHHhhhhHHHHHHHHHhh--------cccchhHHHHHHHH
Q 007637 186 VLETFFNWYYASTSVSGMLAFTIIVYIQ--------DHLGWKIGFGVRAI 227 (595)
Q Consensus 186 ~r~~~~~~~~~~~~~g~~~~p~~~~~l~--------~~~g~~~~f~~~~~ 227 (595)
|++..++.....++|..+++.+++.+. +.+|||++|++..+
T Consensus 151 -rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 151 -KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 899999988888888877777766652 46799999987543
No 72
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.84 E-value=2e-18 Score=186.41 Aligned_cols=354 Identities=14% Similarity=0.147 Sum_probs=214.6
Q ss_pred HHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcc---cchhH-HHHHHHHHHHHHHHHHH
Q 007637 42 SFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSY---MGRFW-VILLGSFSSLLGTTTLW 117 (595)
Q Consensus 42 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~~~~~~~~~~l~~~~~~ 117 (595)
+.....+..+.++++.|+++++|+++.+++++.++..+...+..|+.|+++||. +|||| .++.+.+..+++..++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 334555566678899999999999999999999999999999999999999982 38855 56677777777777766
Q ss_pred HhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHH
Q 007637 118 STAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAS 197 (595)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (595)
..++... ......+++.+++.+++.+.......++..|..+++ ++|++..++....
T Consensus 89 ~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~------~~R~~~~~~~~~~ 144 (437)
T TIGR00792 89 TTPDFSA------------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDP------RERESLSTFRRFG 144 (437)
T ss_pred hCCCCCc------------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCH------HHHHHHHHHHHHH
Confidence 5331110 123566677778888888887777788888877543 3388888888878
Q ss_pred HhhhhHHHHHHHHHhh-------cccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhcccc
Q 007637 198 TSVSGMLAFTIIVYIQ-------DHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLY 270 (595)
Q Consensus 198 ~~~g~~~~p~~~~~l~-------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (595)
.++|+.+++.+.+.+. +..+|+..+.+.+++.++..+..++..++.+++.+..+.
T Consensus 145 ~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~------------------ 206 (437)
T TIGR00792 145 ATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE------------------ 206 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc------------------
Confidence 8888777766655443 246899999888777665555544433322110000000
Q ss_pred CCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhc
Q 007637 271 PSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSL 350 (595)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 350 (595)
+..+..+.. +++.+.|.+.................
T Consensus 207 --------------------~~~~~~~~~-------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (437)
T TIGR00792 207 --------------------KKLSLKQIF-------------------------KALFKNDQLLILCLAYLFYNLAFNIK 241 (437)
T ss_pred --------------------cCCCHHHHH-------------------------HHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 00111122222211111111111111
Q ss_pred cc-cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHH
Q 007637 351 NQ-QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMA 429 (595)
Q Consensus 351 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~ 429 (595)
.. ..+ +.....+.. .....+..+..+..++..++.++ +.+|+++ ++.+..+.++.++++.
T Consensus 242 ~~~~~~--~~~~~~~~~------~~~~~~~~~~~i~~ii~~~~~~~----l~~r~g~-------~~~~~~~~~~~~~~~~ 302 (437)
T TIGR00792 242 NGVQVY--YFTYVLGDP------ELFSYMGSIAIVAGLIGVLLFPR----LVKKFGR-------KILFAGGILLMVLGYL 302 (437)
T ss_pred cchhhe--eEeeecCCh------HHHHHHHHHHHHHHHHHHHHHHH----HHHHhCc-------HHHHHHHHHHHHHHHH
Confidence 11 111 111111100 00112222233434444444333 3455443 3566777777777666
Q ss_pred HHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCC-------cchhhHHHHHHHH
Q 007637 430 SAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLP-------KSMSSMAMAIFTL 502 (595)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~gl~~~ 502 (595)
...+.. .+.+.+++..++.+++.+..++..+++..|..| ++.+|.++|+.++
T Consensus 303 ~~~~~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 361 (437)
T TIGR00792 303 IFFFAG---------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTF 361 (437)
T ss_pred HHHHcc---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHH
Confidence 554422 244455566678888888889999999988865 5678999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhh
Q 007637 503 GMAVANLLGGLLVKIVDRVT 522 (595)
Q Consensus 503 ~~~lg~~~g~~l~~~i~~~~ 522 (595)
...+|..+++.+.+.+.+..
T Consensus 362 ~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 362 VRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999988754
No 73
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.84 E-value=3.2e-18 Score=181.02 Aligned_cols=158 Identities=19% Similarity=0.174 Sum_probs=135.5
Q ss_pred chHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 007637 51 LLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPC 130 (595)
Q Consensus 51 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 130 (595)
..+.++.+. +++|+++.+.+++.+++.++..++.+++|+++||+ |||+++..+.++.+++..++.+..
T Consensus 10 ~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~---------- 77 (377)
T PRK11102 10 YLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ---------- 77 (377)
T ss_pred HhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc----------
Confidence 345666665 56999999999999999999999999999999996 999999999999999888887654
Q ss_pred CccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHH
Q 007637 131 NQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIV 210 (595)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 210 (595)
+...+++.|+++|++.+...+...+++.|.+|+ ++|++.+++.+...++|..++|.+++
T Consensus 78 --------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~ 136 (377)
T PRK11102 78 --------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPK-------EEFSRMMSFVTLVMTIAPLLAPIIGG 136 (377)
T ss_pred --------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567788999999999999989999999999988 44899999999999999999999999
Q ss_pred HhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 211 YIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 211 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
++.+..+|++.|++.++..++..+...+..+
T Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (377)
T PRK11102 137 WLLVWFSWHAIFWVLALAAILAAALVFFFIP 167 (377)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999899999998877766655554444333
No 74
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.84 E-value=2.9e-18 Score=182.17 Aligned_cols=338 Identities=10% Similarity=-0.014 Sum_probs=202.8
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchh----HHHHHHHHHHHHHHHH
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRF----WVILLGSFSSLLGTTT 115 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr----~~~~~~~~~~~l~~~~ 115 (595)
..++..+++..+.++++.|++ ++|.|..+.|++.+++.+...++++++|+++||+ ||+ +.+.++..... ..
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~---~~ 86 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFA---VA 86 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHH---HH
Confidence 355555666777888999985 5799999999999999999999999999999996 984 33332222111 11
Q ss_pred HHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHH
Q 007637 116 LWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYY 195 (595)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (595)
..... .+.+.+++.|++.+++.+...|...++..+..++ |++.++..+
T Consensus 87 ~~~~~-----------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~---------~~~a~~~~~ 134 (382)
T PRK11128 87 FWFGA-----------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTWQKQ---------IGLDYGKVR 134 (382)
T ss_pred HHHhc-----------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHHHhh---------ccCCcchHH
Confidence 11111 1577888899999999999999888887765222 567778788
Q ss_pred HHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCCCC
Q 007637 196 ASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNT 275 (595)
Q Consensus 196 ~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (595)
...++|.+++|.+++++.+++|||..|++.++..++..+. .+..++. +++++. ++. .
T Consensus 135 ~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~---~~~~~~-------------~~~--~---- 191 (382)
T PRK11128 135 LWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLG-QLLRPTI---MPQGES-------------RQQ--E---- 191 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHccCCC---CCcccc-------------ccc--c----
Confidence 8889999999999999999999999998777544433332 2222211 111000 000 0
Q ss_pred ccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhh-hhhhHhhhhhccc-c
Q 007637 276 VNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPM-CSTGIIILLSLNQ-Q 353 (595)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~-~ 353 (595)
.+...++ .+..+.|.++..... .+....+...+.. .
T Consensus 192 -------------~~~~~~~-----------------------------~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 229 (382)
T PRK11128 192 -------------SAGWPAW-----------------------------KALLKEPTVWRFLLCVSLLQGSHAAYYGFSA 229 (382)
T ss_pred -------------ccccchH-----------------------------HHHHcChhHHHHHHHHHHHHHHhHhHHHHHH
Confidence 0000000 011111222222111 1111111111111 1
Q ss_pred ceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 007637 354 TFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAV 433 (595)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~ 433 (595)
.+ .. + .+ .+...+.....+..+ .......+..++.+| .+.++.+..+.++.++++..++.
T Consensus 230 ~~---~~---~--~g----~s~~~~g~~~~~~~~-~~~~~~~~~g~l~~r-------~~~~~~l~~~~~~~~~~~~~~~~ 289 (382)
T PRK11128 230 IY---WQ---A--AG----YSASTIGYLWSLGVV-AEVLIFAFSNRLFRR-------WSARDLLLLSAICGVVRWGLMGS 289 (382)
T ss_pred HH---HH---H--CC----CCHhHHHHHHHHHHH-HHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHHHHHHh
Confidence 11 11 1 11 112222222221111 111112222233444 44445677777777777766654
Q ss_pred HHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHH-HHHHHHHHHHH
Q 007637 434 VENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFT-LGMAVANLLGG 512 (595)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~-~~~~lg~~~g~ 512 (595)
.+ +.+++++..++.+++++...+....+..+.. ++.+++++++.+ ..+.+|..+|+
T Consensus 290 ~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ig~ 346 (382)
T PRK11128 290 TT----------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALYSALAMGGSIAIMT 346 (382)
T ss_pred hh----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHHHHHHHHHHHHHHH
Confidence 33 5666677788899999999999999988874 555688999886 55678889999
Q ss_pred HHHHHHhhhh
Q 007637 513 LLVKIVDRVT 522 (595)
Q Consensus 513 ~l~~~i~~~~ 522 (595)
.+.|.+.+..
T Consensus 347 ~i~G~l~~~~ 356 (382)
T PRK11128 347 VLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHhc
Confidence 9999988643
No 75
>PRK10133 L-fucose transporter; Provisional
Probab=99.84 E-value=5.6e-18 Score=183.22 Aligned_cols=155 Identities=14% Similarity=0.105 Sum_probs=121.1
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
+....+..+....+...+........+| .+++++|+++.+.++..+.+.++..+++++.|+++||+ ||||++..+.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~ 100 (438)
T PRK10133 23 SYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFL 100 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 3444455555555665666555545555 45899999999999999999999999999999999996 999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
++++.+++.... . ..++..++++|+++|+|.|...+..++++.|..+++ +|.
T Consensus 101 ~~~~~~l~~~~~-~--------------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~-------~~~ 152 (438)
T PRK10133 101 YALGAALFWPAA-E--------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPES-------SGH 152 (438)
T ss_pred HHHHHHHHHHHH-h--------------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChh-------hHH
Confidence 999987753211 0 126788999999999999999999999998865552 255
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhh
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQ 213 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~ 213 (595)
...+.+.....+|..++|.+++.+.
T Consensus 153 ~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 153 FRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888888889999998876543
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.84 E-value=3.8e-18 Score=206.20 Aligned_cols=155 Identities=12% Similarity=0.083 Sum_probs=122.2
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCch--hhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEA--ANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSS 109 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 109 (595)
+.....++..++..+...+....+..++...++.+. ...+++.+++.++..++++++|+++||+ |||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHH
Confidence 444455556666666655555566666666666654 3468889999999999999999999996 9999999988776
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
+++.++..+... ..+++.+++.|+++|++.+...++..+++.|++|+++ |++
T Consensus 88 ~~~~~~~~~~~~---------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-------r~~ 139 (1146)
T PRK08633 88 VGLTLLIVLAYY---------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN-------LSR 139 (1146)
T ss_pred HHHHHHHHHHHH---------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc-------chh
Confidence 666555443220 0157889999999999999999999999999999844 899
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhcc
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYIQDH 215 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l~~~ 215 (595)
++++...+.++|.++||.+++++.+.
T Consensus 140 ~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 140 ANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998775
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.84 E-value=1.2e-17 Score=179.69 Aligned_cols=392 Identities=12% Similarity=0.033 Sum_probs=220.3
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccch-hHHHHHHHHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGR-FWVILLGSFSSLLGTTT 115 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~~~~~~~~~~l~~~~ 115 (595)
+....++...++-...++++.|+++++|++..+.|++.+++.++..++++++|+++||+ || |+++.++.++..+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHH
Confidence 34455666666666679999999999999999999999999999999999999999995 65 77888887777777666
Q ss_pred HHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCC-cchhhhHhhHHHHH
Q 007637 116 LWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDN-PKNKRVLETFFNWY 194 (595)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~ 194 (595)
..+.. +++.+++.+++.+++.+...+...++..+...+..+ ....-.|.+.++
T Consensus 86 ~~~~~------------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G-- 139 (418)
T TIGR00889 86 AAQVT------------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG-- 139 (418)
T ss_pred HHHhc------------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh--
Confidence 66543 466778888888888777666665553322211000 000000233333
Q ss_pred HHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCC-hhHHHHHHHHHHHhhccccCCC
Q 007637 195 YASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKS-LFTSFIQVIVASLRKISLYPSS 273 (595)
Q Consensus 195 ~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 273 (595)
.+|.+++|.+++.+.....|. +|++.++..++..+. .+..++.++.+++++ ...+ .
T Consensus 140 ----~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~---~-------------- 196 (418)
T TIGR00889 140 ----TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKMSIKV---M-------------- 196 (418)
T ss_pred ----hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCCCCCCCccccccCHHH---H--------------
Confidence 478889998888874433344 455555554444333 233333211110000 0000 0
Q ss_pred CCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhH-HhhhhhhHhhhhhccc
Q 007637 274 NTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRI-TPMCSTGIIILLSLNQ 352 (595)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~ 352 (595)
...+. ...+ +.+.++.. ...++........+..
T Consensus 197 -----------------~~~~~---~~~~--------------------------k~~~~~~~~~~~~~~~~~~~~~~~~ 230 (418)
T TIGR00889 197 -----------------LGLDA---FILF--------------------------KNKRMAIFFFFSMLLGAPLQITNIF 230 (418)
T ss_pred -----------------hhhhH---HHHh--------------------------cCCCeeeHHHHHHHHHhHHHHHHHh
Confidence 00000 0000 00111111 1111101101011100
Q ss_pred -cceeeeeccccCCCCCCCccc-ccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 007637 353 -QTFATLQAKTMDRHISPSFQI-PAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMAS 430 (595)
Q Consensus 353 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~ 430 (595)
+.+ . +....+...+.++.. ..+....+..+..++.... ..++.+|+++| +.+.++.++.++++..
T Consensus 231 ~~~~-~-~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~----~g~l~dr~g~r-------~~l~~~~~~~~v~~~l 297 (418)
T TIGR00889 231 GNGF-L-HEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILT----IPFFLKRFGIK-------KVMLLSLVAWALRFGF 297 (418)
T ss_pred HHHH-H-HHhcccccccchhhhhhHHHHHHHHHHHHHHHHHH----HHHHHHHhCcH-------HHHHHHHHHHHHHHHH
Confidence 111 0 000000000000000 0112222222222223332 33345665444 5777777777777655
Q ss_pred HHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHH-HHHHHHHH
Q 007637 431 AAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFT-LGMAVANL 509 (595)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~-~~~~lg~~ 509 (595)
+.... ....+.+.+++..++.+++++...+....++.|.+|++.|++++|+.+ ..+++|..
T Consensus 298 ~~~~~------------------~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~ 359 (418)
T TIGR00889 298 FAYGD------------------PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSL 359 (418)
T ss_pred HHHcC------------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHH
Confidence 55422 000123445566788999999989999999999999999999999997 67889999
Q ss_pred HHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 007637 510 LGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAY 565 (595)
Q Consensus 510 ~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~ 565 (595)
+|+.+.|.+.+..+... ..+++..|.+.+++.+++.++++++.++.
T Consensus 360 iGp~l~G~l~~~~g~~~----------~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 360 LGYILSGVMVEKMFAYG----------TFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHhcccc----------CCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999886542100 01246788888888888887777776543
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.83 E-value=2.6e-18 Score=207.47 Aligned_cols=146 Identities=15% Similarity=0.068 Sum_probs=110.3
Q ss_pred HhhhhcCCch-hhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH--HHHHHHHHHHhcccCCCCCCCCCccc
Q 007637 58 YLMNGYHVEA-ANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS--SLLGTTTLWSTAMIPQLKPAPCNQLV 134 (595)
Q Consensus 58 yl~~~l~~s~-~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~ 134 (595)
.+.+..+.+. ...++..+++.+...++.+++|+++||+ |||+++...... ...+..+..+..
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~-------------- 105 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL-------------- 105 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 3444444433 3467778889999999999999999996 999986442221 111111222211
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhc
Q 007637 135 SSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQD 214 (595)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~ 214 (595)
.+++.++++|+++|++.+.+.|+..+++.+++++++ |++++++...+.++|.++||.++|++.+
T Consensus 106 ---------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~-------~~~a~~~~~~~~~ig~~igp~l~g~l~~ 169 (1140)
T PRK06814 106 ---------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE-------LLGANALVEAGTFIAILLGTIIGGLATI 169 (1140)
T ss_pred ---------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc-------cchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 167889999999999999999999999999999944 8999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHH
Q 007637 215 HLGWKIGFGVRAILMVLSTL 234 (595)
Q Consensus 215 ~~g~~~~f~~~~~~~~~~~~ 234 (595)
..+|++.|.+..+..+++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~ 189 (1140)
T PRK06814 170 SGNFVILVALLMGIAVLGWL 189 (1140)
T ss_pred ccccHHHHHHHHHHHHHHHH
Confidence 99999998544444443333
No 79
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.83 E-value=4.5e-18 Score=174.48 Aligned_cols=393 Identities=10% Similarity=0.042 Sum_probs=259.3
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHH
Q 007637 27 EGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGS 106 (595)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 106 (595)
++.+.|.++.... .+.-+++.+.+.+.+..++.+++|+|+.|.+++.++..+...+..++-|++.||+ |-|++..++.
T Consensus 9 k~~~~~~L~~S~~-af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~ 86 (417)
T COG2223 9 KRIARRNLWLSTL-AFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSM 86 (417)
T ss_pred ccchhHHHHHHHH-HHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHH
Confidence 3455666665444 3444555566677888888999999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhh
Q 007637 107 FSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRV 186 (595)
Q Consensus 107 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (595)
++..+-++.++++...+ +.+.+++..++.|++ |+.++...++++.+||++ +
T Consensus 87 ~l~~IP~~~~~~a~~~~---------------------~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~-------~ 137 (417)
T COG2223 87 LLLLIPCLGLAFAVTYP---------------------STWQLLVIGLLLGLA-GASFAVGMPNASFFFPKE-------K 137 (417)
T ss_pred HHHHHHHHHHHHHccCC---------------------chHHHHHHHHHHhcc-cceehcccccccccCChh-------h
Confidence 99999988888766322 347899999999999 556788899999999994 4
Q ss_pred HhhHHHHHHHHHhhhhHHHHHHHHHhhcccc---hhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHH
Q 007637 187 LETFFNWYYASTSVSGMLAFTIIVYIQDHLG---WKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVAS 263 (595)
Q Consensus 187 r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (595)
+|.+.+++. ..|+|..+...+++++....+ |+....+..+..++..+.+++..++.++.++..++...
T Consensus 138 qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~-------- 208 (417)
T COG2223 138 QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP-------- 208 (417)
T ss_pred hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch--------
Confidence 799999999 999999999999999999888 99998888888888777777776654442221111000
Q ss_pred HhhccccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhh
Q 007637 264 LRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTG 343 (595)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 343 (595)
.. .+.+.+.|..+.+..++...
T Consensus 209 ------------------------------~~----------------------------~~~v~~~~~~W~lsllY~~t 230 (417)
T COG2223 209 ------------------------------AQ----------------------------LKAVFSNKDTWLLSLLYFAT 230 (417)
T ss_pred ------------------------------hH----------------------------HHHHhcCcchHHHHHHHHHH
Confidence 00 00111122232322222221
Q ss_pred HhhhhhccccceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHH
Q 007637 344 IIILLSLNQQTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLL 423 (595)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l 423 (595)
+--+..+. .+.+.+...+.+. -....+.+....+....+.-|+ ..++.+| .+..|...+....
T Consensus 231 FG~Fvgfs-----~~l~~~~~~~fg~-~~~~Ag~~a~~f~~~g~l~Rp~--------GG~LsDR---~Gg~rv~~~~f~~ 293 (417)
T COG2223 231 FGGFVGFS-----AYLPMYLVTQFGL-SPVTAGLIAFLFPLIGALARPL--------GGWLSDR---IGGRRVTLAVFVG 293 (417)
T ss_pred HHHHHHHH-----HHHHHHHHHhcCC-ChhhHHHHHHHHHHHHHHHHhc--------cchhhhh---ccchhHHHHHHHH
Confidence 11111111 1111112222210 0011222333333333334444 4444444 4444677777666
Q ss_pred HHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHH
Q 007637 424 SAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLG 503 (595)
Q Consensus 424 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~ 503 (595)
++++.....+... ....+.+.+..+..++...+..++.+-..+.++...+|+ +.|.+.|+....
T Consensus 294 ~~~~~~~l~~~~~---------------~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~ 357 (417)
T COG2223 294 MALAAALLSLFLT---------------GFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAI 357 (417)
T ss_pred HHHHHHHHHcccc---------------ccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHh
Confidence 6666665554330 000112444444455556666666677777788888875 688999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 007637 504 MAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAY 565 (595)
Q Consensus 504 ~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~ 565 (595)
+++|++.-|...+...+.++ .+...|+++...++++.+..+....+.
T Consensus 358 G~lGGf~lp~~~g~~~~~tg---------------~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 358 GGLGGFFLPLAFGVSLDLTG---------------SYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred ccccccchhHHHHHHHHhcc---------------cHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999998888888776552 346688899999999888887776543
No 80
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.83 E-value=6e-17 Score=177.70 Aligned_cols=176 Identities=11% Similarity=0.073 Sum_probs=135.5
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhccc-----chhHH-HH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYM-----GRFWV-IL 103 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-----Grr~~-~~ 103 (595)
++|..+..+...+......+.....++.|+.+ .|.+.++.+.+. ..... .++.+++|+++|| . ||||. +.
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr-~~~~~~Grrr~~ll 85 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDR-YTPPFLGRRRGWLL 85 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHc-ccccCCCCchHHHH
Confidence 34456666667777777777777888888765 599999988863 22222 2688999999999 6 99986 55
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcch
Q 007637 104 LGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKN 183 (595)
Q Consensus 104 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (595)
++.+..+++...+++.. | ..+.+.+.+.+++.+++.+...+...++..|++|+
T Consensus 86 ~~~i~~~~~~~~~a~~~--~-------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~------ 138 (491)
T PRK11010 86 ATQLLLLVAIAAMGFLE--P-------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPA------ 138 (491)
T ss_pred HHHHHHHHHHHHHHHcC--C-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh------
Confidence 66666667666665543 1 12567788889999999999999999999999998
Q ss_pred hhhHhhHHHHHHHHHhhhhHHHHHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHH
Q 007637 184 KRVLETFFNWYYASTSVSGMLAFTIIVYIQD-HLGWKIGFGVRAILMVLSTLMFL 237 (595)
Q Consensus 184 ~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~-~~g~~~~f~~~~~~~~~~~~~~~ 237 (595)
++|+++.++...+.++|.++++.+.+++.+ ..|||..|++.++..++..+..+
T Consensus 139 -~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 139 -EERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 448999999999999999999999999988 57999999998876665544433
No 81
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.81 E-value=7.1e-17 Score=178.28 Aligned_cols=399 Identities=12% Similarity=0.064 Sum_probs=231.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHH
Q 007637 69 NGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAI 148 (595)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (595)
+.+++.+...++..++.++.|+++|++ |||++++++.+.+.+|.++++++. +..+
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~------------------------~~~~ 144 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP------------------------SWYQ 144 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh------------------------hHHH
Confidence 458999999999999999999999995 999999999999999999999876 7889
Q ss_pred HHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcc--cchhHHHHHHH
Q 007637 149 LLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDH--LGWKIGFGVRA 226 (595)
Q Consensus 149 ~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~--~g~~~~f~~~~ 226 (595)
++++|++.|+|.|+.....+.+++|..|+ +.|+...+.++...++|..++. +.++..++ ++||..+.+..
T Consensus 145 l~~GR~l~G~g~G~~~~~~piy~sEiap~-------~~RG~l~~~~~l~~~~Gi~~~~-~~~~~~~~~~~~Wr~~~~~~~ 216 (513)
T KOG0254|consen 145 LIVGRILTGLGVGGASVLAPVYISEIAPA-------HIRGTLVSLYQLFITIGILLGY-CINYGTSKVYAGWRIPLGLAL 216 (513)
T ss_pred HHHHHHHhccchhhhhhcchhhHhhcCCh-------hhhHHHHHHHHHHHHHHHHHHH-HHhhhhccCCccHHHHHHHHH
Confidence 99999999999999999999999999998 5699999999999999998885 44554444 48999888877
Q ss_pred HHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCCCCccccccCCCCccCCCCchhhhh--hhhcccC
Q 007637 227 ILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLN--KACMIEN 304 (595)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~ 304 (595)
+..++..+. .+..|+.++...+..+..+..+.+........ .+ ...+...+. ...+...
T Consensus 217 i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~----~~--------------~~~~~~~~~~~~~~~~~~ 277 (513)
T KOG0254|consen 217 IPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSP----ED--------------VEVELELLKIKLLVEAEV 277 (513)
T ss_pred HHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCC----cc--------------hHHHHHHHHHHHHHhhhc
Confidence 766655555 33333221111011111111111111111000 00 000000000 0101000
Q ss_pred CCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccccceeeeeccccCCCCCCCcccccccccchhHH
Q 007637 305 PEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQIPAGSFTVFTII 384 (595)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 384 (595)
.+ ....|..+..+ ...|.......+..++ .+..+ +....|.....+... ..... ....+
T Consensus 278 ~~--------~~~~~~~l~~~--~~~~~~~i~~~l~~fq--q~tG~--~~~~~Y~~~if~~~g-----~~~~~--~~~~~ 336 (513)
T KOG0254|consen 278 AE--------GKASWGELFSP--KVRKRLIIGLLLQLFQ--QLTGI--NYVFYYSTTIFKSAG-----LKSDT--FLASI 336 (513)
T ss_pred cc--------ccccHHHhcCc--chHHHHHHHHHHHHHH--HHhCC--ceEEeehHHHHHhcC-----CCCch--HHHHH
Confidence 00 00011111110 1112121111111111 11111 222222222222211 11110 11111
Q ss_pred HHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHH
Q 007637 385 TVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIP 464 (595)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 464 (595)
.......+...+...+.+|.+|| ..++.|...++++++.++.......+.. + ......++.++.
T Consensus 337 ~~~~v~~~~t~~~~~lvd~~gRr-------~lll~s~~~m~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~ 400 (513)
T KOG0254|consen 337 ILGVVNFLGTLVATYLVDRFGRR-------KLLLFGAAGMSICLVILAVVGVFALYYP---N------SSKGAGWLAIVF 400 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhccH-------HHHHHhHHHHHHHHHHHHHHHHHhccCC---C------cccchhHHHHHH
Confidence 11111111111223457877766 4788888888888887776542100000 0 001123344444
Q ss_pred HHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHH
Q 007637 465 QFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFY 544 (595)
Q Consensus 465 ~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f 544 (595)
..++.........|..+.+..|.+|.+.|+++.++....+++.+.+-...........+ ....|
T Consensus 401 ~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~----------------~~~~f 464 (513)
T KOG0254|consen 401 LCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG----------------IGGTF 464 (513)
T ss_pred HHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------ccchH
Confidence 55556666667778888999999999999999999998888887776555444432110 12456
Q ss_pred HHHHHHHHHHHH-HHHHhhhcccccccCC
Q 007637 545 WLLMAMCLVNFG-YFLVCCWAYGPSVDVA 572 (595)
Q Consensus 545 ~~~~~~~l~~~v-~~~~~~~~~~~~~~~~ 572 (595)
..+++.+.+... +.+++.+++|++..++
T Consensus 465 ~~f~~~~~~~~~~fv~~~~pETkg~slee 493 (513)
T KOG0254|consen 465 GYFGGICLLSLIIFVFFFVPETKGLTLEE 493 (513)
T ss_pred HHHHHHHHHHHHHHheEEcccCCCCcHHH
Confidence 777777777777 7888889998876553
No 82
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.81 E-value=1e-17 Score=177.03 Aligned_cols=156 Identities=15% Similarity=0.105 Sum_probs=112.6
Q ss_pred HHHHHhhhhcC--CchhhHHHHHHH-----HHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 007637 54 NMIFYLMNGYH--VEAANGASMLSI-----WSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLK 126 (595)
Q Consensus 54 ~l~~yl~~~l~--~s~~~~~~~~~~-----~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~ 126 (595)
+...++.++.. .++++.+.+.+. ..+...+++++.|+++||+ ||||++..+.++..++..+++++.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~-- 90 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYAT-- 90 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhh--
Confidence 34445555533 445555544433 2233346889999999996 9999999999999999888877541110
Q ss_pred CCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHH
Q 007637 127 PAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAF 206 (595)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 206 (595)
........+++.|+++|++.+...+...+++.|.+|+++ |++..++...+..+|..+++
T Consensus 91 --------------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~-------r~~~~~~~~~~~~~G~~i~~ 149 (394)
T TIGR00883 91 --------------IGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK-------RGFYGSFQQVGAPVGLLLAA 149 (394)
T ss_pred --------------hHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc-------chHHHHHHHHHHHHHHHHHH
Confidence 000112468899999999999999999999999998844 78899998888889999998
Q ss_pred HHHHHhh--------cccchhHHHHHHHHHHHHHH
Q 007637 207 TIIVYIQ--------DHLGWKIGFGVRAILMVLST 233 (595)
Q Consensus 207 ~~~~~l~--------~~~g~~~~f~~~~~~~~~~~ 233 (595)
.+.+.+. +.++||++|++.++..+++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 150 LTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 8776653 35789999988766554443
No 83
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.80 E-value=7.4e-18 Score=177.28 Aligned_cols=165 Identities=15% Similarity=0.178 Sum_probs=131.2
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGT 113 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~ 113 (595)
.+......++....++...+.++.++++++|+++.+.+++.+.+.++..++++++|+++||+ |||++++++.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 44455555666666677777777788999999999999999999999999999999999996 99999999999999988
Q ss_pred HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH
Q 007637 114 TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193 (595)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (595)
++++++. .+.+.+++.|+++|++.+. .+...++++|.+|+ ++|++..++
T Consensus 82 ~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-------~~r~~~~~~ 130 (366)
T TIGR00886 82 LWAGLAV-----------------------QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPK-------KIQGTALGL 130 (366)
T ss_pred HHHHHHh-----------------------hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCH-------hhhhHHHHH
Confidence 8776643 0467788999999999665 45678899999988 448999999
Q ss_pred HHHHHhhhhHHHHHHHHHhhc----------ccchhHHHHH-HHHHHH
Q 007637 194 YYASTSVSGMLAFTIIVYIQD----------HLGWKIGFGV-RAILMV 230 (595)
Q Consensus 194 ~~~~~~~g~~~~p~~~~~l~~----------~~g~~~~f~~-~~~~~~ 230 (595)
.....++|..+++.+++.+.. +.+||+.|++ .++...
T Consensus 131 ~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 131 AAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILL 178 (366)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHH
Confidence 887788888888777766554 3489999944 344333
No 84
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.80 E-value=2.4e-17 Score=175.91 Aligned_cols=393 Identities=12% Similarity=0.063 Sum_probs=229.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHH
Q 007637 71 ASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILL 150 (595)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (595)
+.+.+++.+++++|..++|+++||+ |||+.++++.++..++.+...++.. ..+..+++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~---------------------~~~~e~li 120 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKS---------------------APSFEMLI 120 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHH---------------------hhhHHHHH
Confidence 4667889999999999999999996 9999999999988888877666541 12678999
Q ss_pred HHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHH--HhhcccchhHHHHHHHHH
Q 007637 151 SSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIV--YIQDHLGWKIGFGVRAIL 228 (595)
Q Consensus 151 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~--~l~~~~g~~~~f~~~~~~ 228 (595)
++|++.|+..|......+-++.|..|. +.||..-.+...+..+|.+++..++. .+...-.|++.+.+..+.
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP~-------~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~ 193 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISPK-------NLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIP 193 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcChh-------hhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHH
Confidence 999999999999999999999999999 55899888888888999998865543 233445699999888887
Q ss_pred HHHHHHHHHhhC--cccccc-CCCCChhHHHHHHHHHHHhhccccCCCCCccccccCCCCccCCCCchhhhhhhhcccCC
Q 007637 229 MVLSTLMFLFGS--HLYIKV-QPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENP 305 (595)
Q Consensus 229 ~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 305 (595)
.++.++.+.++. |++.-. +.+.+..++..+.. ..+.. +++.. ++.....+....++
T Consensus 194 ~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y---~G~~~----~~~~~-------------e~~~~e~~~~~~~~- 252 (485)
T KOG0569|consen 194 ALLQLALLPFLPESPKYLLIKKGDEEEARKALKFY---RGKED----VEAEI-------------EEMLREIEEEELEK- 252 (485)
T ss_pred HHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHH---hCCCc----chhHH-------------HHHHHHHHHhcccc-
Confidence 776666654432 222111 11111111111110 00000 00000 00000001100000
Q ss_pred CCCCCCCCCCCCC-CccccchhhhhhhH-HHhHHhhhhhhHhhhhhccc-cceeeeeccccCCCCCCCcccccccccchh
Q 007637 306 EEDLNPDGTASNP-WKLCSIGQVESLKA-LLRITPMCSTGIIILLSLNQ-QTFATLQAKTMDRHISPSFQIPAGSFTVFT 382 (595)
Q Consensus 306 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (595)
..... ++.+.. .+.|+ ++..+.+.. ...+.. +.. .+....+..+.| ++.+.....+
T Consensus 253 --------~~~~sl~~~~~~---~~lR~~~~i~~~v~~-----~qq~sGi~ai-~~Yst~i~~~aG----~~~~~a~~an 311 (485)
T KOG0569|consen 253 --------KKQISLRQLLKN---PTLRRPLLIGIVVSF-----AQQFSGINAI-FFYSTSIFKTAG----FTPEEAQYAN 311 (485)
T ss_pred --------ccCCcHHHHhcC---cchhHHHHHHHHHHH-----HHHhcCccee-HHHHHHHHHHcC----CCHHHHHHHH
Confidence 00011 110001 11111 111111111 001111 111 111111112111 2222222222
Q ss_pred HHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHH
Q 007637 383 IITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWL 462 (595)
Q Consensus 383 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 462 (595)
..... ...+...+...+.+|.+|| ..++.+..++.+..+.+........... . -.++..+
T Consensus 312 ~~~g~-v~~~~t~~~~~lid~~gRR-------pLll~~~~~~~~~~~~~~~~~~l~~~~~---~---------~~~y~~i 371 (485)
T KOG0569|consen 312 LGIGI-VNLLSTLVSPFLIDRLGRR-------PLLLISLSLMAVALLLMSIALFLSNSFG---S---------WLSYLCI 371 (485)
T ss_pred HHHHH-HHHHHHHHHHHHHHhcCCc-------HHHHHHHHHHHHHHHHHHHHHHHHHHhh---h---------HHHHHHH
Confidence 11111 1111222333457888877 4777777777766655554432110000 0 0011112
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhH
Q 007637 463 IPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDY 542 (595)
Q Consensus 463 ~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~ 542 (595)
+..+........+..|..+-+.+|.+|++.|++++++..+.+.+.+++-+...+.+.+..+ .+
T Consensus 372 ~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-----------------~~ 434 (485)
T KOG0569|consen 372 AAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-----------------PY 434 (485)
T ss_pred HHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------ch
Confidence 2233334445556689999999999999999999999999999999998888888776542 25
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccC
Q 007637 543 FYWLLMAMCLVNFGYFLVCCWAYGPSVDV 571 (595)
Q Consensus 543 ~f~~~~~~~l~~~v~~~~~~~~~~~~~~~ 571 (595)
+|+++.+.+++++++.+...+++|+|+..
T Consensus 435 ~filF~i~~~~~~i~~~~~lPETkgr~~~ 463 (485)
T KOG0569|consen 435 VFILFVIPLAIFLIYLYRYLPETKGRTPY 463 (485)
T ss_pred hhHHHHHHHHHHHHHHHHhCcccCCCCHH
Confidence 79999999999999999999999988654
No 85
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.79 E-value=3.4e-17 Score=172.03 Aligned_cols=142 Identities=15% Similarity=0.159 Sum_probs=117.9
Q ss_pred HHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccc
Q 007637 55 MIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLV 134 (595)
Q Consensus 55 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 134 (595)
+.+.+.+++|++.++.+++.+.+.++..++.++.|+++||+ ||||++.++.+...++...+ ...
T Consensus 22 ~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~-------------- 85 (355)
T TIGR00896 22 LLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP-------------- 85 (355)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc--------------
Confidence 34456778999999999999999999999999999999995 99999999988877776655 322
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhc
Q 007637 135 SSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQD 214 (595)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~ 214 (595)
+...+++.|++.|++.+...+....++.|.+|+ + |+++.++++...++|..+++.+++.+.+
T Consensus 86 ----------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~g~~i~~~~~~~l~~ 147 (355)
T TIGR00896 86 ----------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-R-------VGLMTGLYSMALMGGAALAAAATVPLAQ 147 (355)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-h-------hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788999999999998888888888887753 2 7899999999999999999999988877
Q ss_pred cc--chhHHHHHHHHHHH
Q 007637 215 HL--GWKIGFGVRAILMV 230 (595)
Q Consensus 215 ~~--g~~~~f~~~~~~~~ 230 (595)
+. +||..|.+.++..+
T Consensus 148 ~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 148 HSGGHWQQALAWWALPAL 165 (355)
T ss_pred hhhhhHHHHHHHHHHHHH
Confidence 64 39998877655443
No 86
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.78 E-value=1.2e-15 Score=163.31 Aligned_cols=166 Identities=14% Similarity=0.081 Sum_probs=129.0
Q ss_pred HHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcc----cchhH-HHHHHHHHHHHHH
Q 007637 39 VNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSY----MGRFW-VILLGSFSSLLGT 113 (595)
Q Consensus 39 ~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~-~~~~~~~~~~l~~ 113 (595)
...+...+.+......+|.|+++ .|+|.++.|++..+... .+..+++|+++||+ +|||| .+.++.+..+++.
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 34555666666677888999886 49999999999776665 68899999999994 17775 6777787777777
Q ss_pred HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH
Q 007637 114 TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193 (595)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (595)
..+.+.. + ..+.+.+++..++.++..+...+...+++.|.+|++ +|+++.++
T Consensus 83 ~~l~~~~--~-------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~-------~r~~~~~~ 134 (402)
T PRK11902 83 AAMAFCP--P-------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE-------ERGAGAAV 134 (402)
T ss_pred HHHHhcC--c-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh-------hhhHHHHH
Confidence 7666542 0 124666677767778888888899999999999884 38999999
Q ss_pred HHHHHhhhhHHHHHHHHHhhcc-cchhHHHHHHHHHHHHHHHH
Q 007637 194 YYASTSVSGMLAFTIIVYIQDH-LGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 194 ~~~~~~~g~~~~p~~~~~l~~~-~g~~~~f~~~~~~~~~~~~~ 235 (595)
...+.++|.++++.+++++.+. +|||..|++.++..++..+.
T Consensus 135 ~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 135 KVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999988885 59999999887766554443
No 87
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.78 E-value=8.6e-16 Score=163.32 Aligned_cols=381 Identities=14% Similarity=0.056 Sum_probs=220.8
Q ss_pred HHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Q 007637 38 IVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLW 117 (595)
Q Consensus 38 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~ 117 (595)
....++.-+.+-...++++.|+++ .|+|..|.|.+.++..+...+.++++|+++||...+||++.++.++.++......
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555667889999876 6899999999999999999999999999999974578888777776666554444
Q ss_pred HhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHH
Q 007637 118 STAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAS 197 (595)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (595)
... +++.+++..++..+......|...++..+...+ ++.-++-....
T Consensus 87 ~~~------------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~---------~~~~YG~iRlw 133 (400)
T PF03825_consen 87 FSS------------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD---------RGKDYGRIRLW 133 (400)
T ss_pred Hhc------------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc---------ccCCCCcchhh
Confidence 332 456666667777777777777777777766664 23345555555
Q ss_pred HhhhhHHHHHH-HHHhhcccc---hhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCC
Q 007637 198 TSVSGMLAFTI-IVYIQDHLG---WKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSS 273 (595)
Q Consensus 198 ~~~g~~~~p~~-~~~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (595)
+++|.+++.+. .+++....+ ....+++.++..++.. .+.+..|+.+.++..++..
T Consensus 134 GSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~-~~~l~lp~~~~~~~~~~~~-------------------- 192 (400)
T PF03825_consen 134 GSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLA-GFALFLPKTPPKRSAKESV-------------------- 192 (400)
T ss_pred hhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHH-HHHHhCCCCccccccCCCc--------------------
Confidence 66666666433 223332222 2345555544332222 2222233322111000000
Q ss_pred CCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhcccc
Q 007637 274 NTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQ 353 (595)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 353 (595)
+.....+...++ .+.+..+..+..+.........+..
T Consensus 193 -----------------~~~~~~~~~~ll-------------------------k~~~~~~Fll~~~l~~~~~~~~~~f- 229 (400)
T PF03825_consen 193 -----------------KKLLGLDALKLL-------------------------KNPRFLVFLLAAFLIGISHAAYYTF- 229 (400)
T ss_pred -----------------ccccchHHHHHh-------------------------cCccHHHHHHHHHHHHHHHHHHHHH-
Confidence 000000000010 0111111112212212222222211
Q ss_pred ceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 007637 354 TFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAV 433 (595)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~ 433 (595)
...+++... + .+........ ..+.+.+...-...+|.-+| .+.++.+.++.+..++-..+++.
T Consensus 230 -----~~~yl~~~g--g--~~~~~~g~~~-----~l~~~aEi~~f~~~~~~~~r---~g~~~ll~~a~~~~~vR~~l~a~ 292 (400)
T PF03825_consen 230 -----FSIYLQELG--G--YSGSTIGILW-----ALGVVAEIPFFFFSGRFLKR---FGIKWLLLLALVAYAVRWLLYAY 292 (400)
T ss_pred -----HHHHHHHcc--c--chhhHHHHHH-----HHHHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 0 0001111111 11122233333334444444 66668899999999999988887
Q ss_pred HHHhhhhhhhccCCcCCCCccccchHH----HHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHH-HHHHH
Q 007637 434 VENKRRKFAIDQGLVDEPQKVMDMSAM----WLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLG-MAVAN 508 (595)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~s~~----~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~-~~lg~ 508 (595)
.. .+.+ ...+...+.|+..++.......|+.+.+|++.|++++|+++.. .++|+
T Consensus 293 ~~---------------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~ 351 (400)
T PF03825_consen 293 FS---------------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGG 351 (400)
T ss_pred hc---------------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHH
Confidence 63 1222 2333456799999999999999999999999999999998765 78999
Q ss_pred HHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhc
Q 007637 509 LLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWA 564 (595)
Q Consensus 509 ~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~ 564 (595)
.+|..+.|.+.+..+.++. ..+..+|.+.+++.++..++++++.|+
T Consensus 352 ~iG~~igG~l~~~~g~~~~----------~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 352 AIGSLIGGWLYDAFGARGM----------FDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHhcchhh----------hhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999876532211 123567888888888888888887654
No 88
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.78 E-value=1.7e-16 Score=166.76 Aligned_cols=156 Identities=16% Similarity=0.086 Sum_probs=117.8
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcc----cchhHHH-HHHHHHHHHHHHHHHHhcccCCCCC
Q 007637 53 PNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSY----MGRFWVI-LLGSFSSLLGTTTLWSTAMIPQLKP 127 (595)
Q Consensus 53 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~~~-~~~~~~~~l~~~~~~~~~~~~~~~~ 127 (595)
....+.+.+++|+|.++.++..+. .+...+ .+++|+++||+ +||||.+ +.+.+..++....+++...
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~------ 79 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP------ 79 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc------
Confidence 334445566789999999998655 344444 88999999995 3899974 5666666666555554320
Q ss_pred CCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHH
Q 007637 128 APCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFT 207 (595)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 207 (595)
..+.+.+....++.+++.+...+...+++.|.+|+ ++|+++.++...+.++|.++++.
T Consensus 80 ---------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~-------~~r~~~~~~~~~~~~~G~~~~~~ 137 (356)
T TIGR00901 80 ---------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSD-------EELGYGSTIYIVGYRAGMLLSGS 137 (356)
T ss_pred ---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------hhhchHHHHHHHHHHHHHHHHHH
Confidence 12456666677777888888889999999999988 44899999999999999999999
Q ss_pred HHHHhhcccc--------hhHHHHHHHHHHHHHHHHHHh
Q 007637 208 IIVYIQDHLG--------WKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 208 ~~~~l~~~~g--------~~~~f~~~~~~~~~~~~~~~~ 238 (595)
+++++.+..| ||.+|++.++..++..+..++
T Consensus 138 l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 138 LALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888 999999888776665544443
No 89
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.77 E-value=5e-16 Score=166.57 Aligned_cols=171 Identities=13% Similarity=0.158 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 007637 35 PFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTT 114 (595)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~ 114 (595)
+.+....+...+.+ .+...+.+.+++++|++..+.+++.+.+.++..++.++.|++.||+ |||+++.++.++.+++..
T Consensus 6 ~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 6 ALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 33344444444444 3443444566889999999999999999999999999999999996 999999999999999987
Q ss_pred HHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHH
Q 007637 115 TLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWY 194 (595)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (595)
+...+.. ..++..+++.|++.|+|.|...+..++++.+..|+ ++|++..++.
T Consensus 84 l~~~~~~---------------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 135 (410)
T TIGR00885 84 LFWPAAE---------------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPE-------STATRRLNLA 135 (410)
T ss_pred HHHHHHh---------------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCH-------hHHHHHHHHH
Confidence 7654321 12578889999999999999999999999888877 3478888888
Q ss_pred HHHHhhhhHHHHHHHHHhhcc--------------------------cchhHHHHHHHHHHHHHHHH
Q 007637 195 YASTSVSGMLAFTIIVYIQDH--------------------------LGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 195 ~~~~~~g~~~~p~~~~~l~~~--------------------------~g~~~~f~~~~~~~~~~~~~ 235 (595)
+...++|..++|.+++.+... .+||++|++.+++.++..+.
T Consensus 136 ~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 136 QSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999988876422 36999998877755544333
No 90
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.77 E-value=8.6e-16 Score=165.63 Aligned_cols=439 Identities=11% Similarity=0.062 Sum_probs=240.6
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhc---ccchhHHHHHH-HHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADS---YMGRFWVILLG-SFSS 109 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr---~~Grr~~~~~~-~~~~ 109 (595)
+..+....+...+++-...+++++|+ +.+|.+....+++..+..+...+.+|+.|+++|| .+||||.++++ .+..
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~ 84 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALV 84 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHH
Confidence 33444455555566666667777775 5799999999999999999999999999999994 24999998875 5556
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
+++..+++++.+...+... .............+.++..+..++.+...+...++++|..|+++ +.++.
T Consensus 85 ~~~l~ll~~~~~~~~~~~~-------~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~-----~~~~~ 152 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFGD-------NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDA-----RRTRI 152 (477)
T ss_pred HHHHHHHHhCchhhhhccc-------cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchh-----HHHHH
Confidence 6666666654422110000 00000000112344455555667778788888999999999865 23467
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHh--hcc-------------cchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhH
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYI--QDH-------------LGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFT 254 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l--~~~-------------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (595)
++++.....++|.++|+.++++. .+. .+.+..|++.+++.+++.+...+..++.+..+++...
T Consensus 153 a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~-- 230 (477)
T TIGR01301 153 ANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFI-- 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccch--
Confidence 89999999999999999888764 221 1578899998887777776666655543211110000
Q ss_pred HHHHHHHHHHhhccccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhh-hHH
Q 007637 255 SFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESL-KAL 333 (595)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 333 (595)
+.+. .+.++ ......+.+.. +...+. |.+
T Consensus 231 -----------~~~~---------~~~~~-----~~~~~~~~~i~-------------------------~~~~~mP~~m 260 (477)
T TIGR01301 231 -----------NSEA---------APPSK-----HGEEAFFGELF-------------------------GAFKYLPRPV 260 (477)
T ss_pred -----------hhhc---------ccccc-----cchhhhHHHHH-------------------------HHHHHCCHHH
Confidence 0000 00000 00000000000 000000 112
Q ss_pred HhHHhhhhhhHhhhhhccc--cceeeeecccc-CCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCC
Q 007637 334 LRITPMCSTGIIILLSLNQ--QTFATLQAKTM-DRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRG 410 (595)
Q Consensus 334 l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (595)
.+.+....+.-+-|+.+.. +++ +.+..+- +......++-. .-......+...+...+.+.++.++.++.++|+
T Consensus 261 ~~l~~vqffsW~a~f~~~~y~T~~-vg~~v~~~~~~~~~~y~~g-vr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k-- 336 (477)
T TIGR01301 261 WILLLVTCLNWIAWFPFILFDTDW-MGREVYGGSVNQGAKYDDG-VRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGK-- 336 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHH-HHHHHcCCCCcchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch--
Confidence 2222221111111111111 111 1110000 00000000000 000111111111111233334455566655331
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHh---hhhhhhccCCcCCCCccccch-HHHHHHHHHHHHHHHHHHhhhHHHHHhc
Q 007637 411 LSPKMRMGIGLLLSAVSMASAAVVENK---RRKFAIDQGLVDEPQKVMDMS-AMWLIPQFSLIGLAEAFNAIGQIEFYYS 486 (595)
Q Consensus 411 ~~~~~~l~~g~~l~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~l~g~g~~~~~~~~~~~~~~ 486 (595)
+.-.++.++.+++++...+.... .++.+..++... .+.. .+..+..+.+.|+..+..+..-++++++
T Consensus 337 ----~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~ 407 (477)
T TIGR01301 337 ----RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLP-----PPTGIKASALIVFAILGIPLAITYSIPFALASI 407 (477)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccC-----cchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHH
Confidence 23367777777777777655410 001111111110 0112 3667778889999999999999999999
Q ss_pred cCCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhc
Q 007637 487 QLPKS--MSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWA 564 (595)
Q Consensus 487 ~~P~~--~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~ 564 (595)
..|++ -.|..||+.|.+-.+.+.+.....|.+.+..+ ++..+.+.+.++.+++++++.+..-++
T Consensus 408 ~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g--------------~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 408 RSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG--------------GGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred HccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC--------------CCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 99954 45999999999999999999988888655442 122456777777777877777665544
No 91
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.76 E-value=5.9e-16 Score=169.28 Aligned_cols=361 Identities=11% Similarity=0.104 Sum_probs=204.4
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhh----cccchh-HHHHHHHHHHHHHHH
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLAD----SYMGRF-WVILLGSFSSLLGTT 114 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr-~~~~~~~~~~~l~~~ 114 (595)
..+..++.+..+.++++.|+++.+|+++..+|.++++..+.-.+..|+.|+++| |+ ||| +.++++.+..++++.
T Consensus 14 g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 14 GAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVLF 92 (473)
T ss_pred chhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHHH
Confidence 344456666677788999999999999999999999999999999999999999 64 984 556667777777765
Q ss_pred HHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHH
Q 007637 115 TLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWY 194 (595)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (595)
++...+ .. ........+++..++.+++.........++..|..++. ++|.+..++-
T Consensus 93 llf~~p---~~---------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~------~eR~~l~~~~ 148 (473)
T PRK10429 93 LLFSAH---LF---------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDK------REREQLVPYP 148 (473)
T ss_pred HHHcCC---CC---------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCH------HHHHHHHHHH
Confidence 554321 10 01123455666667778888888888889998887553 3478888876
Q ss_pred HHHHhhhhHHHHHHHHHhhc-------ccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhc
Q 007637 195 YASTSVSGMLAFTIIVYIQD-------HLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKI 267 (595)
Q Consensus 195 ~~~~~~g~~~~p~~~~~l~~-------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (595)
....++|+.+++.+...+.. ..+|+....+.+++.+++.+..++..++..+.+...+.
T Consensus 149 ~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~--------------- 213 (473)
T PRK10429 149 RFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSA--------------- 213 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccc---------------
Confidence 66777776665554443321 12466655555554444443333322221100000000
Q ss_pred cccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhh
Q 007637 268 SLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIIL 347 (595)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 347 (595)
+ ++..+..+... .+.+.|.++..+...+...+..
T Consensus 214 -----~----------------~~~~~~~~~~~-------------------------~~~~n~~~~~ll~~~~~~~~~~ 247 (473)
T PRK10429 214 -----E----------------GSHLTLKDIVA-------------------------LIYKNDQLSCLLGMALAYNIAS 247 (473)
T ss_pred -----c----------------ccCCCHHHHHH-------------------------HHhcCHHHHHHHHHHHHHHHHH
Confidence 0 00000000000 0112233333222222111111
Q ss_pred hhccccceeeeecc-ccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHH
Q 007637 348 LSLNQQTFATLQAK-TMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAV 426 (595)
Q Consensus 348 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i 426 (595)
.... ++..+... ...... . ...+.....+..++..++.+ ++.+|+++| +.+.++.++.++
T Consensus 248 ~~~~--~~~~y~~~y~~~~~~-----~-~~~~~~~~~i~~ii~~~~~~----~l~~r~gkk-------~~~~~~~~~~~~ 308 (473)
T PRK10429 248 NIIN--GFAIYYFTYVIGDAD-----L-FPYYLSYAGAANLVTLILFP----RLVKSLSRR-------ILWAGASIFPVL 308 (473)
T ss_pred HHHh--hheeeEEEEECCCHH-----H-HHHHHHHHHHHHHHHHHHHH----HHHHHcCcH-------HHHHHHHHHHHH
Confidence 1111 11111111 111100 0 11222223333444444433 234554433 566666665555
Q ss_pred HHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCC-------cchhhHHHHH
Q 007637 427 SMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLP-------KSMSSMAMAI 499 (595)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~gl 499 (595)
+.+.+.+... . .+.+.+.+++..++.+++.+..++..+++.+|..| ++..|...|+
T Consensus 309 ~~~~~~~~~~-----------~------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~ 371 (473)
T PRK10429 309 SCGVLLLMGL-----------A------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSV 371 (473)
T ss_pred HHHHHHHHhc-----------c------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHH
Confidence 5444332210 0 01244555666677889999999999999999976 4556779999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh
Q 007637 500 FTLGMAVANLLGGLLVKIVDRVT 522 (595)
Q Consensus 500 ~~~~~~lg~~~g~~l~~~i~~~~ 522 (595)
..+.+.+|..+++.+.+.+.+..
T Consensus 372 ~~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 372 QTMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999988754
No 92
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.75 E-value=7.4e-16 Score=162.45 Aligned_cols=140 Identities=10% Similarity=-0.010 Sum_probs=127.4
Q ss_pred chHHHHHHhhhhcCCchhh-HHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 007637 51 LLPNMIFYLMNGYHVEAAN-GASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAP 129 (595)
Q Consensus 51 ~~~~l~~yl~~~l~~s~~~-~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 129 (595)
..++..+|+.+++|+++++ .+.+.+++..++.++.+++|+++||+ |.|+++.++.+.+.+.++++.++.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~--------- 113 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGT--------- 113 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 3466778999999999999 99999999999999999999999995 999999999999999999998866
Q ss_pred CCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHH
Q 007637 130 CNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTII 209 (595)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 209 (595)
+...+.+.|++.|++.|... +...++..++|+ ++|+++.++...+.++|.+++++++
T Consensus 114 ---------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~-------kER~ratsi~~sg~~vG~~Ia~~L~ 170 (511)
T TIGR00806 114 ---------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPP-------SRYQRAAAYSRAAVLLGVFLSSVLG 170 (511)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH-------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999 999999999999 6699999999999999999999999
Q ss_pred HHhhcccchhHHHHH
Q 007637 210 VYIQDHLGWKIGFGV 224 (595)
Q Consensus 210 ~~l~~~~g~~~~f~~ 224 (595)
+++ ..+||+.-+.+
T Consensus 171 qll-~s~gWr~y~~L 184 (511)
T TIGR00806 171 QLL-VTLGWISYSTL 184 (511)
T ss_pred HHH-HhcCchhHHHH
Confidence 994 46788875544
No 93
>PRK09669 putative symporter YagG; Provisional
Probab=99.74 E-value=2e-15 Score=163.82 Aligned_cols=172 Identities=13% Similarity=0.154 Sum_probs=119.5
Q ss_pred HHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcc---cchhH-HHHHHHHHHHHHHHHHH
Q 007637 42 SFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSY---MGRFW-VILLGSFSSLLGTTTLW 117 (595)
Q Consensus 42 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~~~~~~~~~~l~~~~~~ 117 (595)
+..+..+..+..+++.|+++.+|+++.+++.+.++..+...+..|+.|+++||. +|||| .++++.+..+++..++.
T Consensus 19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f 98 (444)
T PRK09669 19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF 98 (444)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 444555566678899999999999999999999999999999999999999982 27754 45567676767665554
Q ss_pred HhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHH
Q 007637 118 STAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAS 197 (595)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (595)
..+..+ .......+++..++.+.+..+......++.+|..++. ++|.+..++....
T Consensus 99 ~~p~~~------------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~------~eR~~l~~~r~~~ 154 (444)
T PRK09669 99 YTPDFG------------------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDP------RERHSLQSWRFAL 154 (444)
T ss_pred hCCCCC------------------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCH------HHHHHHHHHHHHH
Confidence 332110 1234556666666777777777777788888887653 3378888887777
Q ss_pred HhhhhHHHHHHHHHhhc-------ccchhHHHHHHHHHHHHHHHHHH
Q 007637 198 TSVSGMLAFTIIVYIQD-------HLGWKIGFGVRAILMVLSTLMFL 237 (595)
Q Consensus 198 ~~~g~~~~p~~~~~l~~-------~~g~~~~f~~~~~~~~~~~~~~~ 237 (595)
.++|+.+++.+...+.. ..+|+..+.+.+++.+++.+..+
T Consensus 155 ~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~ 201 (444)
T PRK09669 155 SFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCF 201 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHh
Confidence 78887777665443332 24677777766665544444333
No 94
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.74 E-value=3.4e-15 Score=162.78 Aligned_cols=380 Identities=9% Similarity=0.080 Sum_probs=218.9
Q ss_pred CCCchh-HHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccc-----hhHHH
Q 007637 29 GSLRTM-PFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMG-----RFWVI 102 (595)
Q Consensus 29 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~~ 102 (595)
.+++-. .......+.+.+. +.....+..++++++|++.++.+...+...+...+-++ +|.++||+ + ||+.+
T Consensus 22 ~~~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l 98 (468)
T TIGR00788 22 FHPRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYL 98 (468)
T ss_pred CCcchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHH
Confidence 334433 3444477888888 77778888999999999999999999999998888765 99999996 7 77777
Q ss_pred HHHHHHHH-HHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCc
Q 007637 103 LLGSFSSL-LGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNP 181 (595)
Q Consensus 103 ~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~ 181 (595)
+++.++.. ++...++.. + .......+.+++.+++.+..-.+..++..|..+ +++
T Consensus 99 ~~~~~l~~~~~~~~l~~~---~--------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~- 153 (468)
T TIGR00788 99 VLSGLLGSAILYGLLPGK---V--------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP- 153 (468)
T ss_pred HHHHHHHHHHHHHhcccc---c--------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC-
Confidence 77765542 222222110 0 123334446778899988888899999999998 443
Q ss_pred chhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccc-cCCCCChhHHHHHHH
Q 007637 182 KNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIK-VQPDKSLFTSFIQVI 260 (595)
Q Consensus 182 ~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 260 (595)
+.++...++.+...++|.++++.++|++.+.++|+..|++.++..++..+...+ .++.++ ..++......
T Consensus 154 ---~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~-~~E~~~~~~~~~~~~~~----- 224 (468)
T TIGR00788 154 ---SAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNL-SKERRAFVRPRIGTYLE----- 224 (468)
T ss_pred ---CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHh-cccccccccccccccch-----
Confidence 235666777777788999999999999999999999999888776665433333 232110 0111000000
Q ss_pred HHHHhhccccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhh
Q 007637 261 VASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMC 340 (595)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 340 (595)
.+ +. . ......+..+.. ++ ...+..+.|.+...+.+
T Consensus 225 ----------------~~-------~~-~-~~~~~~~~~~~~----------------~~--~l~~~l~~~~i~~~l~f- 260 (468)
T TIGR00788 225 ----------------MN-------MA-L-LTLGVLANVKVQ----------------IL--GLRGAIQLLEIAKPLIF- 260 (468)
T ss_pred ----------------hh-------hh-h-hhhhHHHHHHHH----------------HH--HHHHHHhcHHHHHHHHH-
Confidence 00 00 0 000000000000 00 00000011112111111
Q ss_pred hhhHh-hhhhccc-cceeeeeccccCCCCCCCcccccccccch---hHHHHHHHHHhHhhhhhhhhccccCCCCCCCchH
Q 007637 341 STGII-ILLSLNQ-QTFATLQAKTMDRHISPSFQIPAGSFTVF---TIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKM 415 (595)
Q Consensus 341 ~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (595)
..+ +...... ...+.+... .++ .++...... ..+..++...+ .+++.+| .+.++
T Consensus 261 --ifl~~~~~~~~~~~~f~~~~~----~lG----~s~~~~G~~~~~~~v~~i~g~~~--------~~~~~~~---~~~r~ 319 (468)
T TIGR00788 261 --IFLSYANLPGASGSVFCATTQ----CLP----GGPSFSGMSKVVGNLGSLCGVGG--------YDRFLKT---FPYRL 319 (468)
T ss_pred --HHHHHhhcCCCCceeEEEEcc----cCC----CCcchhhhHHHHHHHHHHHHHHH--------HHHHHhh---CCHHH
Confidence 111 1111112 222222221 111 223333222 23333333333 2333223 55556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhH
Q 007637 416 RMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSM 495 (595)
Q Consensus 416 ~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~ 495 (595)
.+.++.++.+++.....+... + ....-| . .+.+++....++.+++.++...+...+..+.+|++.+|+
T Consensus 320 ~l~~~~~l~~~~~~~~~~l~~-~--~~~~~g--------i-~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt 387 (468)
T TIGR00788 320 LFGVTTLLYTLSSLFDLILVK-R--WNLAFG--------I-SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESS 387 (468)
T ss_pred HHHHHHHHHHHHHhCceeeee-c--cccccC--------C-CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceeh
Confidence 777777777766544321110 0 000000 0 122344556678888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007637 496 AMAIFTLGMAVANLLGGLLVKIVDRVT 522 (595)
Q Consensus 496 ~~gl~~~~~~lg~~~g~~l~~~i~~~~ 522 (595)
..|+.+...++|..+++.+++.+.+..
T Consensus 388 ~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 388 VFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999888887644
No 95
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.74 E-value=3.4e-16 Score=157.66 Aligned_cols=337 Identities=16% Similarity=0.115 Sum_probs=200.5
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCC
Q 007637 63 YHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSAT 142 (595)
Q Consensus 63 l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (595)
.+-+..-+|.+-+.|.+...+..+.+|.++||+ |||.++.+|.+..++.+.+.+.+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~---------------------- 119 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR---------------------- 119 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 344556789999999999999999999999997 999999999999999888888766
Q ss_pred chhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhc---ccchh
Q 007637 143 PAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQD---HLGWK 219 (595)
Q Consensus 143 ~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~---~~g~~ 219 (595)
++..+.++|++.|+..|.. ..+.++++|.+++++ |+.+++....+..+|.++||.++|++.. ..|-.
T Consensus 120 --~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~-------r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~ 189 (451)
T KOG2615|consen 120 --NFAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY-------RPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSY 189 (451)
T ss_pred --HHHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh-------ccceeeeeehhhhcchhhcchhhhHHHhhHhhhccC
Confidence 6777778899999998875 677899999999944 7999999999999999999999999987 22211
Q ss_pred HHHHH-HHHHHHHH---HHHHHhhCccccccCCCC---ChhHHHHHHHHHHHhhccccCCCCCccccccCCCCccCCCCc
Q 007637 220 IGFGV-RAILMVLS---TLMFLFGSHLYIKVQPDK---SLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDN 292 (595)
Q Consensus 220 ~~f~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (595)
+|.+ +..+.+++ ...+.++.++..+.+++. .+..+ ..+.+. ....
T Consensus 190 -p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~~~~~---------------------~~~~~~------~~~~ 241 (451)
T KOG2615|consen 190 -PFALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHSTLQE---------------------AADDRL------ALLK 241 (451)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHhCCccccchhhcccccchhh---------------------hhhhhh------hhcc
Confidence 2222 22111111 223333344432222111 00000 000000 0011
Q ss_pred hhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccccceeeeeccccCCCCCCCcc
Q 007637 293 LRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQ 372 (595)
Q Consensus 293 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (595)
.++..+....++.. . .+..+..+.+ .. . -++|...+.. + .+....++. ++|+
T Consensus 242 ~~~~~~v~~lrn~p------------~----~~~i~~~~i~-~l-~----~~ly~~l~s~--~-~~t~~~l~~---~rfg 293 (451)
T KOG2615|consen 242 FARIFKVAALRNPP------------L----LDFISVLRIF-GL-H----YFLYLELFSG--L-ENTVLFLTH---GRFG 293 (451)
T ss_pred hhhhhhhhhhcCcc------------c----cchHHHHHHH-HH-H----HHHHHHHHHH--H-HhhHHHhhc---CccC
Confidence 11222222221111 0 0000000100 00 0 0111111100 0 000001100 1122
Q ss_pred cc---cccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcC
Q 007637 373 IP---AGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVD 449 (595)
Q Consensus 373 ~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~ 449 (595)
.. .+.......+.+... +....|.+++..+ .....+..++.++.-.+++.+...
T Consensus 294 ~ss~~~G~vl~~tGl~m~~~----ql~~~~~l~~~~~-----~~~a~l~~~l~~~vP~~llls~~~-------------- 350 (451)
T KOG2615|consen 294 YSSMQQGKVLSTTGLLMLVI----QLALVPILPRYKG-----NIKAVLLFSLLLIVPAFLLLSLAR-------------- 350 (451)
T ss_pred CChhhheeeeehhhHHHHHH----HHhcccccccccc-----chhhHHHHHHHHHHHHHHHHhccc--------------
Confidence 22 223333333333333 3334455555321 122344555555554555554432
Q ss_pred CCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007637 450 EPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVD 519 (595)
Q Consensus 450 ~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~ 519 (595)
....+.....+.++..+...+....++....|.+.||+++|+....+.++-++||++.|.+.
T Consensus 351 --------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~ 412 (451)
T KOG2615|consen 351 --------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIF 412 (451)
T ss_pred --------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeE
Confidence 33456677788889999999999999999999999999999999999999999999988866
No 96
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.73 E-value=4.1e-15 Score=162.76 Aligned_cols=153 Identities=16% Similarity=0.224 Sum_probs=119.4
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCc
Q 007637 53 PNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQ 132 (595)
Q Consensus 53 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 132 (595)
.....++.+++|-+ ....|+.+...++..+..++.|.++|.+ |||.+++.+.++..+|.++++-+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 45567888899876 5677999999999999999999999995 999999999999999999988655
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHh
Q 007637 133 LVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYI 212 (595)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l 212 (595)
+...++++..+.|+|.|... .....++|..|.+ .|..+..+.....-+....+|.++..+
T Consensus 130 ------------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k-------~R~~~~~~~~~~~i~~~~~~~~ia~~~ 189 (599)
T PF06609_consen 130 ------------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNK-------WRGLGLAIASIPFIITTWISPLIAQLF 189 (599)
T ss_pred ------------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccc-------hhhhHhHHHHHHHHhhhcccHHHHHHh
Confidence 56679999999999987764 4455689999983 366666555544444445667676666
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHhh
Q 007637 213 QDHLGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 213 ~~~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
..+.+|||.|++..+...++++..+++
T Consensus 190 ~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 190 AAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 667799999999888766665554433
No 97
>PRK09848 glucuronide transporter; Provisional
Probab=99.73 E-value=3e-15 Score=162.52 Aligned_cols=150 Identities=11% Similarity=0.049 Sum_probs=99.2
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcc---cchhHHH-HHHHHHHHHHHHH
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSY---MGRFWVI-LLGSFSSLLGTTT 115 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~-~~~~~~~~l~~~~ 115 (595)
..+..++.+....++++.|+++.+|+++.++|.+.++..+...+..++.|+++||. .||||.. .++.+...+...+
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~ 95 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVL 95 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 45556667667778888999999999999999999999999999999999999983 2777754 5555544444443
Q ss_pred HHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHH
Q 007637 116 LWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYY 195 (595)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (595)
+.... ... .........++..++.+++.+...+...++..+..++.+ +|.+..++-.
T Consensus 96 ~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------~r~~~~~~r~ 152 (448)
T PRK09848 96 VFWVP-TDW----------------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ------SRARLGAARG 152 (448)
T ss_pred HHhCc-CCC----------------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH------HHHHHHHHHH
Confidence 32111 000 001133444555667788888888888887776665533 2566554433
Q ss_pred HH-----HhhhhHHHHHHHHHh
Q 007637 196 AS-----TSVSGMLAFTIIVYI 212 (595)
Q Consensus 196 ~~-----~~~g~~~~p~~~~~l 212 (595)
++ .+++..++|++.+..
T Consensus 153 ~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 153 IAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 32 345566667665543
No 98
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.70 E-value=2.7e-15 Score=157.33 Aligned_cols=388 Identities=10% Similarity=-0.001 Sum_probs=222.1
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHH-
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSL- 110 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~- 110 (595)
+..+......+..-+++-...++.+.|+++..|+|.++.|.+.++..+...+.+|+.|.++||. |.||-+++.+....
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence 3455555556666666666789999999998999999999999999999999999999999995 97776554433222
Q ss_pred -HHHHHH-HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 111 -LGTTTL-WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 111 -l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
.+-... .+.+.+.. + ++++.++.++..+.......+.. |.+-++.. +..+
T Consensus 86 l~~pff~~v~~pll~~--------------------n---~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~s----r~~~ 137 (412)
T PF01306_consen 86 LFGPFFIYVFGPLLQS--------------------N---FWLGAIIGGIYLGLVFNAGVPLS-EAYAERVS----RRNG 137 (412)
T ss_dssp TCHHHHHHTHHHHHHT--------------------T----HHHHHHTTTTTTTTTTTHHHHH-HHHHHHHH----HHHS
T ss_pred HHHHHHHHHHHHHHHH--------------------H---HHHHHHHHHHHHHHHHcccchHH-HHHHHHHH----HHhc
Confidence 122121 12110000 1 23333333444444333333332 43333221 3345
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhcc
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKIS 268 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (595)
.=+|-....+++|.+++..++|++.+ .+.+..|++..+..++..++.++.+++..++.+..+. .
T Consensus 138 feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~---------------~ 201 (412)
T PF01306_consen 138 FEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADA---------------L 201 (412)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTT---------------S
T ss_pred CCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcc---------------c
Confidence 55666778889999999999999886 4667788877665544444444433322111100000 0
Q ss_pred ccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhH-hhh
Q 007637 269 LYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGI-IIL 347 (595)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~ 347 (595)
. ..++..+..|. .++-+.|.++....+..... .|.
T Consensus 202 -------------~-----~~~~~~~~~~~--------------------------~~l~k~~~fw~~~l~v~g~~~~Y~ 237 (412)
T PF01306_consen 202 -------------G-----AKKDKVSLKDV--------------------------LSLFKMRNFWFFVLFVIGVAAIYD 237 (412)
T ss_dssp -------------S-----S------HHHH--------------------------HHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred -------------c-----cCCCCCcHHHH--------------------------HHHhcchhHHHHHHHHHHHHHHHH
Confidence 0 00000000010 11112234433333333322 233
Q ss_pred hhccc-cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHH
Q 007637 348 LSLNQ-QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAV 426 (595)
Q Consensus 348 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i 426 (595)
...+| ..++ ....+... .++..+...+.+....=.+. -.+...+.+| +++++.+.++..++++
T Consensus 238 vfdqqf~~y~---~~~f~~~~-----~g~~~~G~l~s~~v~~E~~~-m~~~p~li~r-------ig~k~~Lllag~i~~i 301 (412)
T PF01306_consen 238 VFDQQFPIYF---ASFFQSAG-----QGNQMYGYLWSVQVFLEALM-MFFSPWLINR-------IGAKNLLLLAGVIMAI 301 (412)
T ss_dssp HHHHHHHHHH---HHTSSSHH-----HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-------H-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHhcccc-----cChhHHhHHHHHHHHHHHHH-HHHHHHHHHh-------cChHhHHHHHHHHHHH
Confidence 32233 3321 11111110 12223333333322221111 1112223444 5566788888888999
Q ss_pred HHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHH-HHHHH
Q 007637 427 SMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIF-TLGMA 505 (595)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~-~~~~~ 505 (595)
-.+.+++.+ +++++.+.-.+.++-..+......-|+.+.+|++..++...+. ++..+
T Consensus 302 Ri~~~~~~~----------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~ 359 (412)
T PF01306_consen 302 RIIGSGFAT----------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQ 359 (412)
T ss_dssp HHHHHHT------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHH
T ss_pred HHHHHhhhc----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHH
Confidence 988888765 7788888889999999999999999999999999999999884 78899
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 007637 506 VANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCC 562 (595)
Q Consensus 506 lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~ 562 (595)
+|..+.+.+.|.+.|.. ++...|++++.+.+...++..+.-
T Consensus 360 ~~~~i~s~~~G~lyd~~----------------G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 360 IGIIILSPLAGYLYDRI----------------GFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhhhHHhhHhhc----------------CcHHHHHHHHHHHHHHHHHheeee
Confidence 99999999999988754 245678898888877776666554
No 99
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.69 E-value=4.3e-14 Score=150.58 Aligned_cols=177 Identities=11% Similarity=-0.028 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHH--HHHHHHHHHHHHHHH-HHHhhcccchhHHHHHHHHHH-
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASM--LSIWSSISNFLAIVG-AFLADSYMGRFWVILLGSFSS- 109 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~--~~~~~~~~~~~~~~~-G~laDr~~Grr~~~~~~~~~~- 109 (595)
+..+....+.+.+.+....+.+|.|+++ .|+|.++.|.+ .+...+...+.+|+. ++.+||+ ||||..++++.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 3445556777788877788899999865 69999999997 466677887777777 6689995 9999976665332
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
.+....+.... +. ......++....+.++..+...+...++..|..++ +.++.
T Consensus 81 ~~~~~~~~~~~--~~------------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~-------~~~~~ 133 (390)
T TIGR02718 81 SACLASLALVG--PD------------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNG-------RTLAK 133 (390)
T ss_pred HHHHHHHHcCC--cc------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------hhhhH
Confidence 22222222111 10 11122233333444455555555555555554444 33566
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhh
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
..+....+..+|..+++.+.+++.++.|||.+|++.++..++..+..++.
T Consensus 134 ~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 134 GNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 66666677788999999888899999999999999887766555554443
No 100
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.69 E-value=4.6e-16 Score=160.22 Aligned_cols=433 Identities=12% Similarity=0.048 Sum_probs=227.7
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhc-------CCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGY-------HVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVI 102 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l-------~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~ 102 (595)
|.+.+...-+..+.+....+.+....+.+-.-.. |+++...+.+..+..++..++|++.||++||+ |||+++
T Consensus 39 ~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vY 117 (538)
T KOG0252|consen 39 HFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVY 117 (538)
T ss_pred HHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhh
Confidence 3344433333445555555554444443322222 25677788999999999999999999999995 999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcc
Q 007637 103 LLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPK 182 (595)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~ 182 (595)
-..++++.++++.++++. +++....-...++..|+++|+|.|+-+|...+..+|..-.+.
T Consensus 118 G~~liImIi~t~~~~~s~-----------------~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~--- 177 (538)
T KOG0252|consen 118 GKELIIMIICSALSGLSV-----------------GTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT--- 177 (538)
T ss_pred hHHHHHHHHHHHHhccCC-----------------CCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc---
Confidence 999999999998666433 111112356788899999999999999999999988776633
Q ss_pred hhhhHhhHHHHHHHHHhh----hhHHHHHHHHHhhcc-----------cchhHHHHHHHHHHHHHHHHHHhh--Cccccc
Q 007637 183 NKRVLETFFNWYYASTSV----SGMLAFTIIVYIQDH-----------LGWKIGFGVRAILMVLSTLMFLFG--SHLYIK 245 (595)
Q Consensus 183 ~~~~r~~~~~~~~~~~~~----g~~~~p~~~~~l~~~-----------~g~~~~f~~~~~~~~~~~~~~~~~--~~~~~~ 245 (595)
||...+......+. |++++-++.+-.... .=||..|.+.++-.+ +.+.+. .++.+
T Consensus 178 ----RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~---~~ly~Rl~M~Et~- 249 (538)
T KOG0252|consen 178 ----RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPAL---LVLYFRLKMPETA- 249 (538)
T ss_pred ----ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHH---HHHHhhhcCCcch-
Confidence 67766655444444 444444433332221 129988877654432 222222 22211
Q ss_pred cCCCCChhHHHH-HHHHHHHhhccccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccc
Q 007637 246 VQPDKSLFTSFI-QVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSI 324 (595)
Q Consensus 246 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (595)
+.+.+. +...++.++.....+. +...+++ . .. .-.....+.-+..
T Consensus 250 ------~Y~al~~~~~~~a~~d~~k~~~~-----~~~~~~~-------------~---~~-------~~~~~~~~~~~F~ 295 (538)
T KOG0252|consen 250 ------RYTALVSKKLKQAAGDMKKVLSV-----DIEAEST-------------A---ES-------DVPPPSNSFGLFS 295 (538)
T ss_pred ------hHHHHhhcCHhhhhhcccccccc-----ccchhhc-------------c---cc-------CCCCcccccchHH
Confidence 111000 1111111111100000 0000000 0 00 0000000000011
Q ss_pred hhhhhh--hHHHhHHhhhhhhHhhhhhccc-cceeeeeccccCCCCCCCcccccccccch--hHHHHHHHH---HhHhh-
Q 007637 325 GQVESL--KALLRITPMCSTGIIILLSLNQ-QTFATLQAKTMDRHISPSFQIPAGSFTVF--TIITVTLWI---AIYDR- 395 (595)
Q Consensus 325 ~~~~~~--~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~---~~~~~- 395 (595)
....++ |.++..+.-|+ ..-.- .+.-+++...++. + ++.-........ .+....+++ -+-++
T Consensus 296 ~~f~~~hg~~Llgt~~~WF------llDiafy~~nL~~s~I~~~-i--g~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw 366 (538)
T KOG0252|consen 296 RLFLRWHGKHLLGTAGTWF------LLDIAFYGQNLFQSVIFSA-I--GVIPSANTYHELFKVAEGNLIIAVCSTVPGYW 366 (538)
T ss_pred HHHHHHHHHHHHHHHHHHH------hhhhhhhccccHHHHHHHh-h--ccCCCcchHHHHHHHHHHHHHHHHHccCCcee
Confidence 111111 22222222221 11111 1111222221110 0 000001111111 111111111 11111
Q ss_pred hhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHH
Q 007637 396 AVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAF 475 (595)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~ 475 (595)
+...+.++++|+ ...+.|.+++++-+..++..-+ + + ......++..-+..-+++..
T Consensus 367 ~tv~~id~iGRk-------~iq~~GF~~~~i~~~~~~~~y~--------~-~--------~~~~Gf~v~y~l~~ff~NFG 422 (538)
T KOG0252|consen 367 FTVYFIDIIGRK-------YIQLMGFFIMTIFFFVIAGPYN--------Q-L--------ENTIGFVVLYSLTFFFGNFG 422 (538)
T ss_pred EEEEEeehhhhH-------HHHHhhHHHHHHHHHHHcCCcc--------c-c--------cccCceeehHHHHHHHHhcC
Confidence 223445555544 6788898888887777765331 0 0 00111222222334456667
Q ss_pred HhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHH
Q 007637 476 NAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNF 555 (595)
Q Consensus 476 ~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~ 555 (595)
.+.+...+.+|.+|.+.||+.-|++-.++-+|..+|........+. .+. ......+.++++++.++++.
T Consensus 423 Pn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~-------~yp----~~~g~~~v~~i~~~~~~~gi 491 (538)
T KOG0252|consen 423 PNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH-------NYP----PNIGVRNVFIILAGCMLLGI 491 (538)
T ss_pred CCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc-------cCC----ccccchHHHHHHHHHHHHhH
Confidence 7888888999999999999999999999999999998887665531 111 12356789999999999988
Q ss_pred HHHHHhhhccccccc
Q 007637 556 GYFLVCCWAYGPSVD 570 (595)
Q Consensus 556 v~~~~~~~~~~~~~~ 570 (595)
++.+++- +.+++..
T Consensus 492 ~~T~l~p-Etk~~~l 505 (538)
T KOG0252|consen 492 LFTLLIP-ETKGKSL 505 (538)
T ss_pred heeEEee-cccccCH
Confidence 8777665 7776644
No 101
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.69 E-value=5e-15 Score=166.70 Aligned_cols=201 Identities=15% Similarity=0.239 Sum_probs=146.3
Q ss_pred CchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Q 007637 31 LRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSL 110 (595)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 110 (595)
++.+........+......+........+.++++++.++.|++.+.+.+++.++.++.|+++||+ ||||.+.++.++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHH
Confidence 34443333334444445556666667778899999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHhcccCCCC----------------CCCCCcc-----cc----CCCCCCC--chhHHHHHHHHHHHHHhccCC
Q 007637 111 LGTTTLWSTAMIPQLK----------------PAPCNQL-----VS----SNCSSAT--PAQFAILLSSFALISIGAGCV 163 (595)
Q Consensus 111 l~~~~~~~~~~~~~~~----------------~~~~~~~-----~~----~~~~~~~--~~~~~~~~~~~~l~g~~~g~~ 163 (595)
++.++.++...+..-+ ..-|..- -. ..|.... ...+..++++|+++|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 9998887643110000 0011100 00 0011101 113567889999999999999
Q ss_pred ccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhccc----------------------chhHH
Q 007637 164 RPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHL----------------------GWKIG 221 (595)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~----------------------g~~~~ 221 (595)
.+...+++.|.+|+++ |+...++++.+..+|.++|+++++++.+.+ +|+..
T Consensus 190 ~~~~~~~i~d~~~~~~-------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~ 262 (633)
T TIGR00805 190 FPLGISYIDDFAKSKN-------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIG 262 (633)
T ss_pred hhcCchhhhccCCccc-------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHH
Confidence 9999999999999944 799999999999999999999999887542 27888
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 007637 222 FGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 222 f~~~~~~~~~~~~~~~~~ 239 (595)
|++.+++.++..+.+++.
T Consensus 263 Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 263 FLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 888777666555444443
No 102
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.69 E-value=7.1e-16 Score=156.29 Aligned_cols=150 Identities=15% Similarity=0.138 Sum_probs=136.3
Q ss_pred hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCC
Q 007637 62 GYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSA 141 (595)
Q Consensus 62 ~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (595)
.++-++++.|+++....+.+.+..++.|.+.|| +|+|-.+++|++++.+++++.++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 467778899999999999999999999999999 5999999999999999999999866
Q ss_pred CchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHH
Q 007637 142 TPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIG 221 (595)
Q Consensus 142 ~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~ 221 (595)
++.+++++|.++|+|.++...+..++++|.||++.+ |++++|..-.+..+|-++||..+|.+.+..|...+
T Consensus 158 ---sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e------r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aP 228 (464)
T KOG3764|consen 158 ---SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE------RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAP 228 (464)
T ss_pred ---hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh------hhHHHHHHHHHHhccceecCCcccchHhhcCCcCc
Confidence 678899999999999999999999999999999754 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCcc
Q 007637 222 FGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 222 f~~~~~~~~~~~~~~~~~~~~ 242 (595)
|++.++++++-.++-++..+.
T Consensus 229 FlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 229 FLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred HHHHHHHHHHHHHHHHheeCc
Confidence 999998887776665555443
No 103
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.68 E-value=6.9e-14 Score=154.93 Aligned_cols=140 Identities=15% Similarity=0.021 Sum_probs=125.1
Q ss_pred hhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCC
Q 007637 61 NGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSS 140 (595)
Q Consensus 61 ~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (595)
+..+.+.....+..+++.++..+|+++.|+++|| +|||+++++++++..++.+..+++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~-------------------- 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP-------------------- 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC--------------------
Confidence 5677888889999999999999999999999999 5999999999999999998888876
Q ss_pred CCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhH
Q 007637 141 ATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKI 220 (595)
Q Consensus 141 ~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~ 220 (595)
++..+++.|++.|++.++...+...+++|.+++ +.|+.+..+ ......++.+++.+++++.. +||+
T Consensus 170 ----~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~-------~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~ 235 (521)
T KOG0255|consen 170 ----NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSP-------KQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRW 235 (521)
T ss_pred ----cHHHHHHHHHHHHhhccchhHHhHhhheeecCc-------chhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHH
Confidence 788999999999999999999999999999999 458888888 77777888888889888887 8999
Q ss_pred HHHHHHHHHHHHHHH
Q 007637 221 GFGVRAILMVLSTLM 235 (595)
Q Consensus 221 ~f~~~~~~~~~~~~~ 235 (595)
.+++..+..++.++.
T Consensus 236 ~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 236 LFWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988776655555
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.68 E-value=5.1e-15 Score=159.81 Aligned_cols=354 Identities=14% Similarity=0.130 Sum_probs=222.6
Q ss_pred HHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhh----cccchhHHH-HHHHHHHHHHHHHH
Q 007637 42 SFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLAD----SYMGRFWVI-LLGSFSSLLGTTTL 116 (595)
Q Consensus 42 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr~~~-~~~~~~~~l~~~~~ 116 (595)
+.....+.....+++.|+++.+|+++...+.+..+..+..++..|+.|+++| |+ ||||-. ++|.+..+++..++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 4445555556678899999999999999999999999999999999999999 75 977654 46777788877776
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
.... |. +.........+++..++..++.........++..|..+++++ |.+..++-..
T Consensus 90 f~~~--p~--------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~------R~~l~~~~~~ 147 (428)
T PF13347_consen 90 FSPP--PA--------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE------RTRLSSWRMI 147 (428)
T ss_pred hccc--cc--------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh------hhhHHHHHHH
Confidence 6431 10 000112344557777778999999999999999999887543 7888887777
Q ss_pred HHhhhhHHHHHHHHHhhccc-------chhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccc
Q 007637 197 STSVSGMLAFTIIVYIQDHL-------GWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISL 269 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~~~~-------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (595)
...+|..+...+.+.+.+.. +|++...+.+++.+++.++..+..++..++.++++ ++.
T Consensus 148 ~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~---------------~~~ 212 (428)
T PF13347_consen 148 FSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQE---------------KKI 212 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccc---------------ccc
Confidence 77777765555555544321 58888887777766666555554444111100000 000
Q ss_pred cCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhh
Q 007637 270 YPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLS 349 (595)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 349 (595)
++.+.. .+..+.|.+...+..... .+..
T Consensus 213 ------------------------~~~~~~-------------------------~~~~~nr~~~~l~~~~~~---~~~~ 240 (428)
T PF13347_consen 213 ------------------------SLRDSL-------------------------RSLFRNRPFRILLLAFFL---QWLA 240 (428)
T ss_pred ------------------------ccccch-------------------------hhhcccchHHHHHHHHHH---HHhh
Confidence 000000 001111222222222111 1111
Q ss_pred ccc-cceeee-eccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHH
Q 007637 350 LNQ-QTFATL-QAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVS 427 (595)
Q Consensus 350 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~ 427 (595)
... .+...| ....+.... . .+.+.....+..++..|+..+ +.+|.++| +.+..+.++.+++
T Consensus 241 ~~~~~~~~~y~~~~vl~~~~-----~-~~~~~~~~~~~~~v~~~~~~~----l~~r~gk~-------~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 241 FALMNTFLPYYFTYVLGNEG-----L-ISIFMLIFFVASIVGSPLWGR----LSKRFGKK-------KVYIIGLLLAALG 303 (428)
T ss_pred hhhhhhHHHHHHHHHhcCch-----h-hHHHHHHHHHHHHHHHHHHHH----HHHHccce-------eehhhhHHHHHHH
Confidence 111 111111 111111110 0 122223334444444454333 35665544 5777888888887
Q ss_pred HHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCc-------chhhHHHHHH
Q 007637 428 MASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPK-------SMSSMAMAIF 500 (595)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~-------~~rg~~~gl~ 500 (595)
.+...+.. ..+.+++.+..++.+++.+..+...+++.+|..+. +..|..+|++
T Consensus 304 ~~~~~~~~--------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~ 363 (428)
T PF13347_consen 304 FLLLFFLG--------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVN 363 (428)
T ss_pred HHHHHHHH--------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhh
Confidence 77766653 13778888888999999999999999999998873 5579999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh
Q 007637 501 TLGMAVANLLGGLLVKIVDRVT 522 (595)
Q Consensus 501 ~~~~~lg~~~g~~l~~~i~~~~ 522 (595)
++...++..+++.+.+.+.+..
T Consensus 364 ~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 364 SFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999888765
No 105
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=3.3e-14 Score=155.11 Aligned_cols=409 Identities=12% Similarity=0.062 Sum_probs=235.0
Q ss_pred HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCcc
Q 007637 54 NMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQL 133 (595)
Q Consensus 54 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 133 (595)
.+-..++++++.+..+.+|+.++......+..|+.+.+.||+ |.|.+.+.|.++..+|.++.+++.
T Consensus 67 v~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~~lssF~~------------- 132 (509)
T KOG2504|consen 67 LLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGLLLSSFAT------------- 132 (509)
T ss_pred hhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHHHHHHHHh-------------
Confidence 345667888999999999999999999999999999999996 999999999999999999999876
Q ss_pred ccCCCCCCCchhHHHHHHHHH-HHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHh
Q 007637 134 VSSNCSSATPAQFAILLSSFA-LISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYI 212 (595)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~-l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l 212 (595)
+.+.+++..- +.|+|.|+.+.....++..+|+. +|+.+.++...+..+|..+=|.+..++
T Consensus 133 -----------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k--------kR~lA~Gia~~GsG~G~~~~~~l~~~l 193 (509)
T KOG2504|consen 133 -----------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK--------KRALATGIAVSGTGVGTVVFPPLLKYL 193 (509)
T ss_pred -----------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH--------HHHHHHhhhhccCCcceeeHHHHHHHH
Confidence 5665665554 46999999988888888866665 388999998888899998888899999
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCCCCccccccCCCCccCCCCc
Q 007637 213 QDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDN 292 (595)
Q Consensus 213 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (595)
.+.+|||..+++.+.+.+-+.......+|......+.++. + ..+ ... ..+............+.....+
T Consensus 194 ~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~--~----~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~- 262 (509)
T KOG2504|consen 194 LSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEK--D----LRN--SAA--SVESTPKPVELRISERDSGLKK- 262 (509)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhh--h----hcc--ccc--cccccccccccccccCCCCCCc-
Confidence 9999999999987776665555555555432222111000 0 000 000 0000000000000000000000
Q ss_pred hhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccccceeeeeccccCCCCCCCcc
Q 007637 293 LRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQQTFATLQAKTMDRHISPSFQ 372 (595)
Q Consensus 293 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (595)
..........+.+++. .......... +.+.++-+.+.++. +.....+....+.. .+ ++...... ..+ .-.
T Consensus 263 ~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~d~~ll~~~~fl~---~~~~~~~~~~g~~~-p~-~~l~~~~~-~~g-~~~ 332 (509)
T KOG2504|consen 263 LSLSNLATLKRGPDKW--RNSPLQAFLS-MLDLSLLKDPKFLL---LALSNLFAYLGFNV-PF-VYLPSYAK-SLG-LSS 332 (509)
T ss_pred ccccchhhhhhCCccc--cccchhhhhh-hhhHHHHcCchHHH---HHHHHHHHHHHHHH-HH-HHHHHHHh-hcC-CCh
Confidence 0000000000000000 0000000000 00001011111111 11111111111111 11 11111111 110 000
Q ss_pred cccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCC
Q 007637 373 IPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQ 452 (595)
Q Consensus 373 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (595)
-......++..+..++.-++.+++ .++.. .+......+++++.+++..++.+..
T Consensus 333 ~~aa~l~Siigi~~i~gRi~~G~l----aD~~~-----~~~~~~~~~~ll~~gl~~~~~p~~~----------------- 386 (509)
T KOG2504|consen 333 NDAAFLLSIIGVSDIIGRIILGLL----ADKPG-----IRALVLFLLTLLIAGLARLFLPFAT----------------- 386 (509)
T ss_pred hhhHHHHHHHHHhhhhhhhhhhhh----cCccc-----cchHHHHHHHHHHHHHHHHHHHHhc-----------------
Confidence 011222233333444444443333 23211 2333445667777777665555543
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccc
Q 007637 453 KVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLS 532 (595)
Q Consensus 453 ~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~ 532 (595)
+.+.+....++.|+..+...........+..+.+.-+.+.|+..+.++++..+|+.+.+.+.+.+
T Consensus 387 -----~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t---------- 451 (509)
T KOG2504|consen 387 -----TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT---------- 451 (509)
T ss_pred -----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc----------
Confidence 55666666778888888888887789999999999999999999999999999999988766554
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 007637 533 SNLNKGHLDYFYWLLMAMCLVNFGYFLVCC 562 (595)
Q Consensus 533 ~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~ 562 (595)
++|...|...++..+++.+...+..
T Consensus 452 -----g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 452 -----GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred -----CCeeeehhhcChHHHHHHHHHHHhH
Confidence 2356677777777777765555544
No 106
>PTZ00207 hypothetical protein; Provisional
Probab=99.66 E-value=4.7e-13 Score=147.48 Aligned_cols=179 Identities=8% Similarity=0.027 Sum_probs=130.5
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF 107 (595)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 107 (595)
+++|..+...+.+..+.... |++. .....+++++|++..+.+++.++.. ...++++++|+++||+ |||++++++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~-y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFM-YAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 45555555445555554433 3333 4455678899999999999887744 3446777899999995 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
+..+++++++++... . ...+.+.+++.|++.|+|.+...+.....+.++||+ + |
T Consensus 100 l~~iG~ll~ala~~~-~-----------------i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~-~-------R 153 (591)
T PTZ00207 100 VFCLGTLLFALTFQE-V-----------------IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS-N-------R 153 (591)
T ss_pred HHHHHHHHHHHHhcc-c-----------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh-h-------h
Confidence 999999998875210 0 012688899999999999998888888889999974 2 7
Q ss_pred hhHHHHHHHHHhhhhHH-HHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 188 ETFFNWYYASTSVSGML-AFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~-~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
|++.++...+.++|+++ +++..+++. .+|+..|++.++..++..++.+.
T Consensus 154 G~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~ 203 (591)
T PTZ00207 154 GAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999964 665565554 35777777766655544444333
No 107
>PRK11462 putative transporter; Provisional
Probab=99.64 E-value=1.4e-13 Score=149.91 Aligned_cols=174 Identities=14% Similarity=0.256 Sum_probs=123.0
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhc---ccchhHHHH-HHHHHHHHHHHH
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADS---YMGRFWVIL-LGSFSSLLGTTT 115 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr---~~Grr~~~~-~~~~~~~l~~~~ 115 (595)
..+..++.+..+..++..|+++.+|+++..+|.++.+.-+.-++.-|+.|+++|| .+||||-.+ ++.+..++++.+
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~l 96 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVL 96 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHH
Confidence 3444455666667889999999999999999999999999999999999999996 248876555 566677777666
Q ss_pred HHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHH
Q 007637 116 LWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYY 195 (595)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (595)
+...+ .. ........+++..++..++..+......++.+|..++. ++|++..++..
T Consensus 97 lf~~p---~~---------------s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~------~eRt~l~s~r~ 152 (460)
T PRK11462 97 AYSTP---DL---------------SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDP------TQRISLQSWRF 152 (460)
T ss_pred HHhCC---CC---------------CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCH------HHHHHHHHHHH
Confidence 55432 10 01123455666666778888888888888999888774 44999999988
Q ss_pred HHHhhhhHHHHHHHHHhhcc-------cchhHHHHHHHHHHHHHHHHHH
Q 007637 196 ASTSVSGMLAFTIIVYIQDH-------LGWKIGFGVRAILMVLSTLMFL 237 (595)
Q Consensus 196 ~~~~~g~~~~p~~~~~l~~~-------~g~~~~f~~~~~~~~~~~~~~~ 237 (595)
.+.++|..+++.+...+... .+|+....+.+++.+++..+.+
T Consensus 153 ~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~ 201 (460)
T PRK11462 153 VLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCF 201 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 88888887777665544332 2466665555554444443333
No 108
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.62 E-value=3e-13 Score=146.29 Aligned_cols=154 Identities=11% Similarity=0.049 Sum_probs=129.0
Q ss_pred hhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCC
Q 007637 60 MNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCS 139 (595)
Q Consensus 60 ~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (595)
.+++|....+.+.+.++++++++++.+++|++.||+ .-.+.+....+.+.+-.++.....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~------------------- 132 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH------------------- 132 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 367888899999999999999999999999999995 877777776666655554444433
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhh------
Q 007637 140 SATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQ------ 213 (595)
Q Consensus 140 ~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~------ 213 (595)
++..+++.|++.|+.+++.+|+...+++.+|.+++ |++-+++++...++|+++|.+++..+.
T Consensus 133 -----s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e-------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~ 200 (495)
T KOG2533|consen 133 -----SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE-------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG 200 (495)
T ss_pred -----hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh-------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC
Confidence 67889999999999999999999999999999944 899999999999999999999888763
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhhCccccc
Q 007637 214 DHLGWKIGFGVRAILMVLSTLMFLFGSHLYIK 245 (595)
Q Consensus 214 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 245 (595)
...|||+.|++.+++.+...++.++..|..+.
T Consensus 201 ~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 201 GLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred CcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 34689999999998888777776676665443
No 109
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1.4e-12 Score=133.50 Aligned_cols=137 Identities=12% Similarity=0.126 Sum_probs=118.7
Q ss_pred hhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 007637 49 YGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPA 128 (595)
Q Consensus 49 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 128 (595)
....-.+.+.+++.++++..|++.+..++..++.++.++.|++.+|+ |+|+.++.|+.++++++.+..=++
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa-------- 99 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAA-------- 99 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhh--------
Confidence 34456678888999999999999999999999999999999999995 999999999999999998764222
Q ss_pred CCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHH
Q 007637 129 PCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTI 208 (595)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 208 (595)
...++..++++.++.+.|.|....+.++++....++++. ..-+++.+..+.+|..++|++
T Consensus 100 -------------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a-------~~rlnl~q~fn~lGa~~gp~~ 159 (422)
T COG0738 100 -------------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESA-------AFRLNLAQAFNGLGAILGPLL 159 (422)
T ss_pred -------------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhH-------HHHHHHHHHhhhhHHHHHHHH
Confidence 123688899999999999999999999999999999653 445777788889999999999
Q ss_pred HHHhhc
Q 007637 209 IVYIQD 214 (595)
Q Consensus 209 ~~~l~~ 214 (595)
++++..
T Consensus 160 g~~lil 165 (422)
T COG0738 160 GSSLIL 165 (422)
T ss_pred HHHHHH
Confidence 998776
No 110
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.57 E-value=2.1e-12 Score=136.90 Aligned_cols=357 Identities=14% Similarity=0.163 Sum_probs=221.3
Q ss_pred HHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcc---cchhH-HHHHHHHHHHHHHHHH
Q 007637 41 ESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSY---MGRFW-VILLGSFSSLLGTTTL 116 (595)
Q Consensus 41 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~~~~~~~~~~l~~~~~ 116 (595)
.+..++.+-.+..++..|.++..|+++..+|.++.+.-+.=++.-|+.|.+.||. .||+| -++++.+..++.+.++
T Consensus 21 d~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~ 100 (467)
T COG2211 21 DFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLL 100 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHH
Confidence 3444555566678999999999999999999999999999999999999999962 37665 4556667788877777
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
..+++. ..+.+....++..++.++++........++.++.-++. ++|.+..++-..
T Consensus 101 F~~p~~------------------~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~------~ER~~l~s~R~~ 156 (467)
T COG2211 101 FITPDF------------------SMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDP------QERASLTSWRMV 156 (467)
T ss_pred HcCCCc------------------ccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCH------HHHHHHHHHHHH
Confidence 664411 12346677778888899999999888889988887764 348999998888
Q ss_pred HHhhhhHHHHHHHHHhhc-------ccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccc
Q 007637 197 STSVSGMLAFTIIVYIQD-------HLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISL 269 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~~-------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (595)
..++|..+...+.+.+.. ..||+..-.+.+++..+.++..++..++...+....+.
T Consensus 157 ~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~----------------- 219 (467)
T COG2211 157 FASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT----------------- 219 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc-----------------
Confidence 888887776666655543 34677666665555544444444433322110000000
Q ss_pred cCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhh
Q 007637 270 YPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLS 349 (595)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 349 (595)
+...++.+... ...+.|.++..+.+.+ +.+..
T Consensus 220 --------------------~~~~~~~~~~~-------------------------~~~~Nrp~~~~l~~~l---~~~~~ 251 (467)
T COG2211 220 --------------------GVKLKLKDSFL-------------------------LIFKNRPLLLLLLMNL---LLFIA 251 (467)
T ss_pred --------------------cccccHHHHHH-------------------------HHHccchHHHHHHHHH---HHHHH
Confidence 00011111111 0112233333333222 22233
Q ss_pred ccc-cceeee-eccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHH
Q 007637 350 LNQ-QTFATL-QAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVS 427 (595)
Q Consensus 350 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~ 427 (595)
++. .+...| ....++..- .-............++..++ ..++.+|+ ++++.+.++.++.+++
T Consensus 252 ~~i~~s~~~yy~~y~lg~~~-----l~~~~~~~~~~~~~l~~~~~----~p~L~~~~-------gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 252 FNIRGSIMVYYVTYVLGDPE-----LFAYLLLLASGAGLLIGLIL----WPRLVKKF-------GKKKLFLIGLLLLAVG 315 (467)
T ss_pred HHHHhhhhheeEEEEcCChH-----HHHHHHHHHHHHHHHHHHHh----HHHHHHHh-------chHHHHHHHHHHHHHH
Confidence 333 222122 222222111 00111111111111111221 22234443 4446788888888888
Q ss_pred HHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCC-------cchhhHHHHHH
Q 007637 428 MASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLP-------KSMSSMAMAIF 500 (595)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~gl~ 500 (595)
.....+.. ..+.++++...++.++|.+..++..+++.+|..+ .+..|...|..
T Consensus 316 ~~~~~f~~--------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 316 YLLLYFTP--------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred HHHHHhhc--------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 77776654 1356666777789999999999999999998765 36678888999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh
Q 007637 501 TLGMAVANLLGGLLVKIVDRVT 522 (595)
Q Consensus 501 ~~~~~lg~~~g~~l~~~i~~~~ 522 (595)
.+..-+|..++..+.+++....
T Consensus 376 tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 376 TFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999988764
No 111
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.55 E-value=7.1e-12 Score=126.53 Aligned_cols=173 Identities=15% Similarity=0.161 Sum_probs=140.1
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
-.+..++++.+--|....++-+ +..-+.+++|+|.+.+|.+.++..++..+..++..+++.|+ |.+|.+..++++.++
T Consensus 12 ~li~gIvlia~NLR~~itsvgP-LL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~ 89 (395)
T COG2807 12 LLLAGIVLIAFNLRPAITSVGP-LLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAA 89 (395)
T ss_pred HHHHHHHHHHhccchhhhhhhh-hHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHH
Confidence 3333344444444555444433 44566889999999999999999999999999999999995 999999999999998
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
|..+=... +...++.+-.+.|.|.+......++++-+.||.+ .+..+
T Consensus 90 G~~iR~~~-------------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~--------~~~mt 136 (395)
T COG2807 90 GILIRSLG-------------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR--------VGLMT 136 (395)
T ss_pred HHHHHhcc-------------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc--------hhhHH
Confidence 88764432 3566888888999998888889999999988884 36788
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhccc-chhHHHHHHHHHHHHHHHHHHhh
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHL-GWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
++|....++|+.+++.+...+.++. |||..+.+.++..+++++.++..
T Consensus 137 glYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 137 GLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred hHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 8888999999999999988888877 79999999998888888877664
No 112
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.54 E-value=2.6e-18 Score=186.44 Aligned_cols=138 Identities=20% Similarity=0.184 Sum_probs=112.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHH
Q 007637 68 ANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFA 147 (595)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (595)
...++..+...++..++.+++|+++||+ |||++++++.++..++.++..+++.. .+..
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~---------------------~~~~ 103 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY---------------------NNFW 103 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc---------------------cccc
Confidence 3467889999999999999999999996 99999999999999999888765411 2567
Q ss_pred HHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcc---cchhHHHHH
Q 007637 148 ILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDH---LGWKIGFGV 224 (595)
Q Consensus 148 ~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~---~g~~~~f~~ 224 (595)
.+.++|++.|++.|+..+....++.|..|+ +.|+...++......+|..++..+.-.+... .+||..+.+
T Consensus 104 ~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~-------~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~ 176 (451)
T PF00083_consen 104 MLLIGRFLIGFGIGGAYVVSPIYISEIAPP-------KHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIF 176 (451)
T ss_pred cccccccccccccccccccccccccccccc-------ccccccccccccccccccccccccccccccccccccccccccc
Confidence 899999999999999999999999999999 4478888888888888888887665444332 359999988
Q ss_pred HHHHHHHHHH
Q 007637 225 RAILMVLSTL 234 (595)
Q Consensus 225 ~~~~~~~~~~ 234 (595)
..+..++..+
T Consensus 177 ~~~~~l~~~~ 186 (451)
T PF00083_consen 177 GAIPSLLVLL 186 (451)
T ss_pred cccccccccc
Confidence 7776544333
No 113
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.51 E-value=4.5e-11 Score=129.81 Aligned_cols=360 Identities=16% Similarity=0.156 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH-HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHH
Q 007637 71 ASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF-SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAIL 149 (595)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (595)
+...++..+...+..|+-|-++|+- |+||-++.... +..+++..+.+.. | .+....
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~--~--------------------~~~~~~ 129 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS--P--------------------GQWWLA 129 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC--c--------------------chHHHH
Confidence 5677888888999999999999995 77766655544 4555555555532 1 134444
Q ss_pred HHHHHHHHHhccCCccchhhhhcccCCCCCCcch-------------------hhhHhhHHHHHHHHHhhhhHHHHHHHH
Q 007637 150 LSSFALISIGAGCVRPCSIAFGADQLDNKDNPKN-------------------KRVLETFFNWYYASTSVSGMLAFTIIV 210 (595)
Q Consensus 150 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~-------------------~~~r~~~~~~~~~~~~~g~~~~p~~~~ 210 (595)
.+..++..++.+.......+++.|..++++..+. ...|++..+..+..+++|+++.-++.-
T Consensus 130 ~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l 209 (477)
T PF11700_consen 130 LVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISL 209 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 4444555566666677788888888887654110 112378888877788888877766544
Q ss_pred Hhhc--------ccchhHHHHHHHHHHHHHHHHHHhhCccccccCCC---CChhHHHHHHHHHHHhhccccCCCCCcccc
Q 007637 211 YIQD--------HLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPD---KSLFTSFIQVIVASLRKISLYPSSNTVNYY 279 (595)
Q Consensus 211 ~l~~--------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (595)
.+.. ..+.|..+.+.++..++..+-.++..|+.++.++. .+..+.-++.+...+|+
T Consensus 210 ~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~------------- 276 (477)
T PF11700_consen 210 LLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKE------------- 276 (477)
T ss_pred HHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHH-------------
Confidence 4322 12357788877776665555555555544321111 11122222222222211
Q ss_pred ccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccc-cce-ee
Q 007637 280 HAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQ-QTF-AT 357 (595)
Q Consensus 280 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~-~~ 357 (595)
..+.|.++..+..+. ++.-..+. ..+ .+
T Consensus 277 -----------------------------------------------~~~~~~~~~fLia~~---l~~dg~~ti~~~~~i 306 (477)
T PF11700_consen 277 -----------------------------------------------IRKLRQLFLFLIAYF---LYSDGVNTIISFAGI 306 (477)
T ss_pred -----------------------------------------------HHhChHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 111222222221111 00000000 000 01
Q ss_pred eeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHH--HHHHHHHH
Q 007637 358 LQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVS--MASAAVVE 435 (595)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~--~~~~~~~~ 435 (595)
+... .++ ++...+..+..+ ..+.+.+...+...+-+|++.| +++.+.+++++..+. +.+.++..
T Consensus 307 ~a~~----~lg----~s~~~l~~~~l~-~~i~a~~Ga~~~g~l~~r~g~k-----~~~~l~~~l~~~~~i~~~g~~G~~~ 372 (477)
T PF11700_consen 307 YATE----VLG----MSTTQLIVFGLV-VQIVAIIGALLFGWLQDRFGPK-----TKRTLLISLILWIIIPLYGLFGFWP 372 (477)
T ss_pred HHHH----hcC----cCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCc-----hhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1111 111 112111111111 1111111122222233443322 114444444433222 12222222
Q ss_pred HhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 007637 436 NKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLV 515 (595)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~ 515 (595)
. ..| ..+.+.+.+.-++.|+..+..++..-++..++.|++..+...|++.+.+...+++||.+.
T Consensus 373 ~-------~~g---------~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 373 S-------FFG---------LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred c-------ccC---------cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 001 123344444556788899999999999999999999999999999999999999999999
Q ss_pred HHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHh
Q 007637 516 KIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVC 561 (595)
Q Consensus 516 ~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~ 561 (595)
+.+.+.++ +.++-+....++.++++++++..
T Consensus 437 g~i~~~tg---------------~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 437 GLITDATG---------------SQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHhC---------------CchhHHHHHHHHHHHHHHHHhhc
Confidence 99998763 23455666666666766665433
No 114
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.48 E-value=7.6e-12 Score=125.70 Aligned_cols=154 Identities=14% Similarity=0.006 Sum_probs=118.9
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWST 119 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~ 119 (595)
...++-.....++..+.+-+....|.+..+..++......+..+++..+|.++|++ |||+.+........+.-.+-..+
T Consensus 85 ~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s 163 (528)
T KOG0253|consen 85 MGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS 163 (528)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC
Confidence 33444444455566666777788899999999999999999999999999999995 99999988776655554444443
Q ss_pred cccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHh
Q 007637 120 AMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTS 199 (595)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 199 (595)
+ ++..+++.|.+.|+|.|+ .|...++-.|..|... |..-.-+. ....
T Consensus 164 p------------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~-------r~~~~V~~-~~wa 210 (528)
T KOG0253|consen 164 P------------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH-------RWLLTVMS-FFWA 210 (528)
T ss_pred C------------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC-------CCcchhHH-HHHH
Confidence 3 678899999999999999 8999999999999855 45444444 4556
Q ss_pred hhhHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 200 VSGMLAFTIIVYIQDHLGWKIGFGVRAI 227 (595)
Q Consensus 200 ~g~~~~p~~~~~l~~~~g~~~~f~~~~~ 227 (595)
+|.++...+.=.....+||||.......
T Consensus 211 ig~v~ea~law~vm~~~gwr~~l~~~~~ 238 (528)
T KOG0253|consen 211 IGQVFEALLAWGVMSNFGWRYLLFTSST 238 (528)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 7888888776666677899998776663
No 115
>PRK09952 shikimate transporter; Provisional
Probab=99.46 E-value=1.8e-12 Score=140.46 Aligned_cols=182 Identities=15% Similarity=0.079 Sum_probs=131.4
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSS 109 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 109 (595)
+++.........++..+.+|.+.++++.|+++.+|++......+..+..+...++.+++|+++||+ ||||++.++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHH
Confidence 344444444456677788888889999999999999988766666677777888889999999995 9999998887765
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
+++.+.+...... ......+++..++.+++.+...+...+++.|.+|. +.|++
T Consensus 327 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~-------~~r~t 379 (438)
T PRK09952 327 TLSAFPFFMALEA--------------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGA-------SYRYS 379 (438)
T ss_pred HHHHHHHHHHHHc--------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc-------chhHH
Confidence 5544333221100 01233444455666788787778889999999999 44888
Q ss_pred HHHHHHHH-HhhhhHHHHHHHHHhhccc--chhHHHHHHHHHHHHHHHHHHhh
Q 007637 190 FFNWYYAS-TSVSGMLAFTIIVYIQDHL--GWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 190 ~~~~~~~~-~~~g~~~~p~~~~~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
+.++.+.. ..+|+.++|.+.+++.+.. +|..++.+.++..+++.+..+..
T Consensus 380 g~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 380 GAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 88886644 4589999999999998743 48888887777666666665443
No 116
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.46 E-value=4.1e-10 Score=116.57 Aligned_cols=373 Identities=15% Similarity=0.094 Sum_probs=215.2
Q ss_pred hhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccc-----hhHH-HHHHHHHHHHHHHHHHHhcccCCCCCCCCCcc
Q 007637 60 MNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMG-----RFWV-ILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQL 133 (595)
Q Consensus 60 ~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 133 (595)
..+++++..-.+.+++....... ..+..|+.||++ + ||.- +..|.++...+..+.+++...-.
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~--------- 75 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA--------- 75 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc---------
Confidence 45789998888888888887776 478999999997 6 5543 44456666666666555432111
Q ss_pred ccC--CCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHH
Q 007637 134 VSS--NCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVY 211 (595)
Q Consensus 134 ~~~--~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 211 (595)
.. ..+.+.........++..+.|+|.+....+..++++|..|+++ |++..++.+.+.-+|.+++.++.+.
T Consensus 76 -~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~-------R~~~v~ivw~Mli~G~iv~ai~~g~ 147 (403)
T PF03209_consen 76 -ESGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER-------RPRVVAIVWVMLIVGIIVSAIVFGR 147 (403)
T ss_pred -ccccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh-------hhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0011111233455567777899999988899999999999944 8999999999999999999999998
Q ss_pred hhcccchhHHH----HHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCCCCccccccCCCCcc
Q 007637 212 IQDHLGWKIGF----GVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYV 287 (595)
Q Consensus 212 l~~~~g~~~~f----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (595)
+.+.++..-.. ....+..++.++..+-..++..+..+..
T Consensus 148 lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~------------------------------------- 190 (403)
T PF03209_consen 148 LLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAA------------------------------------- 190 (403)
T ss_pred HccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCC-------------------------------------
Confidence 88776532222 2222222233333222222211111000
Q ss_pred CCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccc-cceeeeeccccCCC
Q 007637 288 TPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQ-QTFATLQAKTMDRH 366 (595)
Q Consensus 288 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 366 (595)
+++...+.+.......+ .+.|.++..+.+. . ...+.| ..+--|-..
T Consensus 191 -~~~~~~f~~a~~~~~~~----------------------~~a~~f~~fl~l~--t---~a~~~QD~iLEPygg~----- 237 (403)
T PF03209_consen 191 -ERPRPPFREAWRQVWAS----------------------PQARRFFVFLFLG--T---LAFFMQDVILEPYGGE----- 237 (403)
T ss_pred -CCCCccHHHHHHHHHhC----------------------CChhHHHHHHHHH--H---HHHHhhHHHcCCchhH-----
Confidence 00111122211111100 0112221111111 1 112223 111011111
Q ss_pred CCCCcccccccccchh---HHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 007637 367 ISPSFQIPAGSFTVFT---IITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAI 443 (595)
Q Consensus 367 ~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~ 443 (595)
-|+++.+.-...+ ....++...+.+.. ..+ + .++++...+|..+.++++.......
T Consensus 238 ---Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~----l~~---~---~~~~~~a~~G~~~~~~~f~lii~a~-------- 296 (403)
T PF03209_consen 238 ---VFGMSVGETTRLTAFWGGGTLLGMLLAGFL----LSR---R---LGKKRTAALGCLLGALAFALIILAG-------- 296 (403)
T ss_pred ---HcCCCHHHHHHHHHHHHHHHHHHHHHHHHH----hcC---C---CCchHHHHHHHHHHHHHHHHHHHHH--------
Confidence 1223333322222 23333333332222 222 1 4455566677777777766555443
Q ss_pred ccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 007637 444 DQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTR 523 (595)
Q Consensus 444 ~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~ 523 (595)
...+.+.+....+++|++.++......+...+.++++..|..+|.|...+.++..++..+.+.+.|...
T Consensus 297 -----------~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~ 365 (403)
T PF03209_consen 297 -----------PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR 365 (403)
T ss_pred -----------hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112567778888999999999999999999999999999999999999999999999999999888753
Q ss_pred cCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHH
Q 007637 524 KHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFL 559 (595)
Q Consensus 524 ~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~ 559 (595)
++.++.....|..+|.+=++..+++.++..
T Consensus 366 ------~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 366 ------ALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred ------HhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 222211233566666666665555554443
No 117
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.45 E-value=4.8e-12 Score=135.04 Aligned_cols=176 Identities=13% Similarity=0.169 Sum_probs=129.9
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSS 109 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 109 (595)
+++..+..+...+.....++....+++.|+++++|+++.+.+.+.+...++..++.+++|+++||+ |||+.+..+.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~ 292 (393)
T PRK15011 214 NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAG 292 (393)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHH
Confidence 334333333333444444555667889999999999999999988888888888999999999995 9999888776655
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
.+....+.... +...+++.+++.+++.|...+...++..|.+|++ |++
T Consensus 293 ~~~~~~~~~~~------------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~--------~g~ 340 (393)
T PRK15011 293 VCFYAGMLMAH------------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ--------AGS 340 (393)
T ss_pred HHHHHHHHHHh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--------cch
Confidence 54433333222 3455566777777776666666667777887752 688
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
+.++++...++|..++|.++|++.+++||+..|++..+..+++++..+.
T Consensus 341 ~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 341 ATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 8998888889999999999999999999999998877777666665544
No 118
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.44 E-value=2.6e-12 Score=141.25 Aligned_cols=180 Identities=13% Similarity=0.146 Sum_probs=129.7
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSS 109 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 109 (595)
+++.........++....+|++..++|.|+++.+|++..+.+...+...++..++.+++|+++||+ |||++++++.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 344444344445556778889999999999988999998888888888899999999999999995 9999998887654
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
.++...+..... ..+...+++++++.+++.+...+....+..+.+|+ +.|++
T Consensus 327 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~-------~~Rg~ 378 (490)
T PRK10642 327 FVLAIPAFILIN---------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPT-------HIRYS 378 (490)
T ss_pred HHHHHHHHHHHh---------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------ccchH
Confidence 433332221110 01345567788888877776667778888899998 44899
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhccc-chhHHHHHHHHHHHHHHHHHHh
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYIQDHL-GWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
+.++.+....+++.++|.+.+++.+.. +|+.++++..+..+++++..++
T Consensus 379 ~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 379 ALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 999866666677889999999988754 4777766555555544444443
No 119
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.39 E-value=6.3e-12 Score=131.95 Aligned_cols=168 Identities=15% Similarity=0.096 Sum_probs=130.7
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGT 113 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~ 113 (595)
.+......++..........+.+.|. +++|.++.+.+.+.+.+.++..++.+++|+++||+ |||+.+.++.++..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 284 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGM 284 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHH
Confidence 33333344444444444555666664 56899999999999999999999999999999995 99999999988888877
Q ss_pred HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH
Q 007637 114 TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193 (595)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (595)
.++.+... .+...+++..++.+++.|...+..+++..|.+|+ ++|++.+++
T Consensus 285 ~~~~~~~~----------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-------~~~~~~~g~ 335 (377)
T TIGR00890 285 AAMLFIPM----------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGP-------ANSAANYGF 335 (377)
T ss_pred HHHHHccc----------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhh-------hhhhhHhHH
Confidence 66654330 0223344556777888888888888899999988 448999999
Q ss_pred HHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 194 YYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLS 232 (595)
Q Consensus 194 ~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~ 232 (595)
++...++|..++|.+.|++.++.||+..|.+.+++.+++
T Consensus 336 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 336 LYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 999999999999999999999999999998877665544
No 120
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.39 E-value=7.1e-12 Score=134.90 Aligned_cols=177 Identities=10% Similarity=0.070 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCc--------hhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVE--------AANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
.+...++..........+.+.|+.+ .|.+ .++.+...++..+...++.++.|+++||+ |||+++.++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~~ 290 (418)
T TIGR00889 213 FFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLVA 290 (418)
T ss_pred HHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 3333444444444445666777754 4443 46678999999999999999999999995 999999999998
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
..++..++...... ..+...+++..++.|++.+...+....++.|.+|+ +.|+
T Consensus 291 ~~v~~~l~~~~~~~--------------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~-------~~~g 343 (418)
T TIGR00889 291 WALRFGFFAYGDPE--------------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPV-------HIRA 343 (418)
T ss_pred HHHHHHHHHHcCcc--------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-------HHHH
Confidence 88876665542200 01345667788899999998888889999999998 6699
Q ss_pred hHHHHHH-HHHhhhhHHHHHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 189 TFFNWYY-ASTSVSGMLAFTIIVYIQDH------LGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 189 ~~~~~~~-~~~~~g~~~~p~~~~~l~~~------~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
+++++.+ ...++|..+||+++|++.++ +||+..|.+.+++.+++.+.+++..++
T Consensus 344 ~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 344 SAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 56789999999999999887 469999998887766666665555543
No 121
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.38 E-value=1e-11 Score=135.67 Aligned_cols=177 Identities=9% Similarity=-0.002 Sum_probs=130.4
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+.++...+..++....++++..++|.|+++.+|++..++++..+...++..++.+++|+++||+ |||+.+........+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 3466666677777777788889999999999999999999999999999999999999999995 999887665544433
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+..++.+.. ..+....++.+++.|+..............|.+|+ +.|+++.
T Consensus 337 ~~~~~~~~~----------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~-------~~~g~a~ 387 (467)
T PRK09556 337 IFTLGVYQH----------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPK-------KAIGVAN 387 (467)
T ss_pred HHHHHHHHh----------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcch-------hhHHHHH
Confidence 332222211 01344455666666654333222233566688888 4589999
Q ss_pred HHHHHHHhh-hhHHHHHHHHHhhc------------ccchhHHHHHHHHHHHHHHHHHHh
Q 007637 192 NWYYASTSV-SGMLAFTIIVYIQD------------HLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 192 ~~~~~~~~~-g~~~~p~~~~~l~~------------~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
++.+...++ |+.++|.+.|++.+ ..||+..|++..++.+++.+..++
T Consensus 388 gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 388 GIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 999988886 77999999999999 568999998877776666555443
No 122
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.38 E-value=3e-11 Score=128.93 Aligned_cols=177 Identities=13% Similarity=0.076 Sum_probs=134.5
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
..+......++...+++++..+++.|+.+ +|++..+++...+.+.++..++.+++|+++||+ |||+.++++..+..++
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~ 283 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVG 283 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHH
Confidence 34444455556677888888999999976 799999999999999999999999999999995 9999999888777776
Q ss_pred HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHH
Q 007637 113 TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFN 192 (595)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (595)
...+...+ . +...+ ..++.|++.+...|.......+.++++ +.+++.++
T Consensus 284 ~~~~~~~~---~--------------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~------~~~g~~~g 332 (393)
T PRK09705 284 FCGFIWLP---L--------------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQP------AIAGKLVA 332 (393)
T ss_pred HHHHHHcc---c--------------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCH------HHHHHHHH
Confidence 65544322 0 11112 224567888888887777777777542 34899999
Q ss_pred HHHHHHhhhhHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 193 WYYASTSVSGMLAFTIIVYIQDHLG-WKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 193 ~~~~~~~~g~~~~p~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
+.+...+++..++|.+.|++.+..| |...|++.++..++..+......++
T Consensus 333 ~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 333 FMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999876 8888888777666555555554443
No 123
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.37 E-value=1.8e-11 Score=130.63 Aligned_cols=166 Identities=13% Similarity=0.105 Sum_probs=130.5
Q ss_pred HHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc
Q 007637 42 SFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAM 121 (595)
Q Consensus 42 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~ 121 (595)
.+..++++....+++.|+.+ .|++ +.+...+.+.++..++.++.|+++||+ ||||.+..+.++..++..+..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~- 300 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc-
Confidence 34455566666778888764 4653 456667788888899999999999995 999999988887777776665433
Q ss_pred cCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhh
Q 007637 122 IPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVS 201 (595)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 201 (595)
+...+++..++.|++.+...+.......|.+|+ +.|+++.++++...++|
T Consensus 301 -----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g 350 (399)
T PRK05122 301 -----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPP-------QNRGAALGAYSVFLDLS 350 (399)
T ss_pred -----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHH
Confidence 455567778889999988888887888888877 45899999999999999
Q ss_pred hHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 202 GMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 202 ~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
..++|.+.|++.++.||+..|++.++..+++++..++..++
T Consensus 351 ~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 351 LGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999998887777766665554443
No 124
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.35 E-value=6.8e-12 Score=132.53 Aligned_cols=169 Identities=14% Similarity=0.040 Sum_probs=128.2
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+..+......++....++....+++.|+++++|.+..+.+...+...++..++.+++|+++||+ |||+.+..+..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHH
Confidence 3455566667777778888888999999889999999999999999999999999999999995 999988765544333
Q ss_pred HH-HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhH
Q 007637 112 GT-TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETF 190 (595)
Q Consensus 112 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (595)
.. ....... . ..+...+++..++.+++.+...+...+++.|.+|+++ |+++
T Consensus 298 ~~~~~~~~~~-~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-------~~~~ 349 (394)
T TIGR00883 298 LAVPLLMALL-D--------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV-------RYTG 349 (394)
T ss_pred HHHHHHHHHh-c--------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc-------eeeE
Confidence 32 2221111 0 0134556667777888888888999999999999844 7888
Q ss_pred HHHHH-HHHhhhhHHHHHHHHHhhcccc-hhHHHHHHHHHH
Q 007637 191 FNWYY-ASTSVSGMLAFTIIVYIQDHLG-WKIGFGVRAILM 229 (595)
Q Consensus 191 ~~~~~-~~~~~g~~~~p~~~~~l~~~~g-~~~~f~~~~~~~ 229 (595)
+++.+ ....+|..++|.++|++.++.| |+..++...+..
T Consensus 350 ~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 350 ASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred eeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 88754 4556788899999999999888 887776655443
No 125
>PRK03699 putative transporter; Provisional
Probab=99.35 E-value=2.7e-11 Score=129.32 Aligned_cols=170 Identities=12% Similarity=0.133 Sum_probs=130.7
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
.++......++...+++.+..++|.|+++.+|++..+++.+.+.+.++..++.+++|+++||+ +||+++..+..+..+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHH
Confidence 344444555666677778889999999999999999999999999999999999999999995 9999988877666555
Q ss_pred HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHH
Q 007637 113 TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFN 192 (595)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (595)
..+..... +...+.+..++.|++.+...+...+...+..|++ +++..+
T Consensus 285 ~~~~~~~~------------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--------~~~~~g 332 (394)
T PRK03699 285 MYLFVNTD------------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA--------SPKLVN 332 (394)
T ss_pred HHHHHHcC------------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--------CHHHHH
Confidence 44443322 2334455566778877777777777777766542 345667
Q ss_pred HHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Q 007637 193 WYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 193 ~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (595)
......++|..++|.+.|++.+..||+..|++.+++.+++.+.
T Consensus 333 ~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 333 FILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 7777888999999999999999999999998877666555443
No 126
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.34 E-value=2.8e-11 Score=128.70 Aligned_cols=192 Identities=16% Similarity=0.121 Sum_probs=141.7
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhh-hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccch-hHH
Q 007637 24 SKPEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMN-GYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGR-FWV 101 (595)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~ 101 (595)
.+..+.+||.++...+..++..+.+....+..-+|+++ +.+-+.+-.|++++...++..++.+..|+...|. |. |+-
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~P 104 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKP 104 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccC
Confidence 34567899999999999999999998888888899876 4778888899999999999999999999999995 75 777
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCc
Q 007637 102 ILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNP 181 (595)
Q Consensus 102 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~ 181 (595)
++.+.++.++|.++.......|+ ...+.++++|++.|+|.|. ....-+++++..-.++
T Consensus 105 li~s~ii~~~g~llY~~l~~~~~-------------------~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~d-- 162 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYVPN-------------------GVKYLMLVARILTGVGVGN-FAVLRAYIADASTVED-- 162 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-------------------chHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccc--
Confidence 88889999999988733332332 2578899999999999876 4677888888666655
Q ss_pred chhhhHhhHHHHHHHHHhhhhHHHHHHHHHhh----ccc---------chhHHHHHHHHHHHHHHHHHHhhCccc
Q 007637 182 KNKRVLETFFNWYYASTSVSGMLAFTIIVYIQ----DHL---------GWKIGFGVRAILMVLSTLMFLFGSHLY 243 (595)
Q Consensus 182 ~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~----~~~---------g~~~~f~~~~~~~~~~~~~~~~~~~~~ 243 (595)
|.++++....+..+|..+||.+...+. ..+ -|-.+-|+.+++.++..++..+..++.
T Consensus 163 -----R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 163 -----RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred -----hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 566666655555566666665544332 111 133455666666666666666655554
No 127
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.33 E-value=5.7e-11 Score=123.19 Aligned_cols=166 Identities=23% Similarity=0.328 Sum_probs=143.1
Q ss_pred HHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhH-HHHHHHHHHHHHHHHHH
Q 007637 39 VNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFW-VILLGSFSSLLGTTTLW 117 (595)
Q Consensus 39 ~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~~~~~~~~~~l~~~~~~ 117 (595)
...++..........+.+.|+.+.+|.+..+.+.+.+...++..++.++.|+++||+ |||+ .+..+.++..++.....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~ 260 (352)
T cd06174 182 LAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALGLLLLA 260 (352)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHH
Confidence 345555566666677888888887899999999999999999999999999999995 9999 99999988888887776
Q ss_pred HhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHH
Q 007637 118 STAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAS 197 (595)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (595)
... +...+++..++.+++.+...+...++..|..|+ +.|++.+++.+..
T Consensus 261 ~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 309 (352)
T cd06174 261 LAP------------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPP-------EARGTASGLFNTF 309 (352)
T ss_pred Hhc------------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCH-------HHHHHHHHHHHHH
Confidence 543 466778889999999999999999999999998 4589999999999
Q ss_pred HhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 198 TSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMF 236 (595)
Q Consensus 198 ~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 236 (595)
.++|..++|.+.+++.+..+|+..|.+.++..+++.+..
T Consensus 310 ~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 310 GSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 999999999999999998999999998888776665554
No 128
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.32 E-value=5.8e-11 Score=125.14 Aligned_cols=159 Identities=12% Similarity=0.177 Sum_probs=125.1
Q ss_pred HhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 007637 47 ASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLK 126 (595)
Q Consensus 47 ~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~ 126 (595)
.......+++.|+.+++|.++.+.+.+.+.......++.+++|+++||+ |||+++.++.+...+.........
T Consensus 214 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~------ 286 (375)
T TIGR00899 214 CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAADN------ 286 (375)
T ss_pred HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHH------
Confidence 3344556778898889999999999988888777888889999999995 999999887766555444333322
Q ss_pred CCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHH
Q 007637 127 PAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAF 206 (595)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 206 (595)
+.+.+++.+++.|++.|...+...++..|..|++ ++++.++++...++|..++|
T Consensus 287 ------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~g~ 340 (375)
T TIGR00899 287 ------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR--------AGAATTLYTNTGRVGWIIAG 340 (375)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch--------hhHHHHHHHHHHHHHHHHHH
Confidence 4555667778888888887788888888877652 46889999988899999999
Q ss_pred HHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 207 TIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 207 ~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
.+.|++.+..||+..|++.++..+++.+...+
T Consensus 341 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 341 SVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 99999999999999999888777666665433
No 129
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.31 E-value=4.9e-11 Score=135.41 Aligned_cols=134 Identities=13% Similarity=-0.007 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHH
Q 007637 72 SMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLS 151 (595)
Q Consensus 72 ~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (595)
....+..++..++.+++|+++||+ |||++++++.++.+++.+++++.. +...+++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~------------------------s~~~ll~ 653 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN------------------------SESAMIA 653 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc------------------------cHHHHHH
Confidence 335566688899999999999995 999999999999888887777644 3445666
Q ss_pred HHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 152 SFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVL 231 (595)
Q Consensus 152 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~ 231 (595)
.+++.+++.++..+...++++|++|. +.|++++++.+....+|++++|++++++.+. +...+|++.+++.++
T Consensus 654 ~~~l~g~~~~~~~~~~~a~~aEl~Pt-------~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll 725 (742)
T TIGR01299 654 LLCLFGGLSIAAWNALDVLTVELYPS-------DKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALAC 725 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHH
Confidence 67777887777888999999999999 6699999999999999999999999988764 456778777776665
Q ss_pred HHHHHHh
Q 007637 232 STLMFLF 238 (595)
Q Consensus 232 ~~~~~~~ 238 (595)
+.++.++
T Consensus 726 ~~ll~~~ 732 (742)
T TIGR01299 726 GGLLALK 732 (742)
T ss_pred HHHHHHh
Confidence 5554443
No 130
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.31 E-value=8.1e-12 Score=121.20 Aligned_cols=379 Identities=14% Similarity=0.143 Sum_probs=214.4
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCc
Q 007637 53 PNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQ 132 (595)
Q Consensus 53 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 132 (595)
.-+..+.+.+.+++.++..++.++|+.-+.+.+.++||+.||.+|-|..-++-++...+|.++.+...
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg------------ 131 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG------------ 131 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch------------
Confidence 34566677778888888999999999999999999999999988988766666666677776665432
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHh
Q 007637 133 LVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYI 212 (595)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l 212 (595)
-..+++.+..+|+++|+|.-....+.+.+...+|..++ .+..+|+......+|..+-..+.+++
T Consensus 132 ---------i~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE-------Ln~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 132 ---------ISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE-------LNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred ---------HHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc-------ccchhhHHHHHHHhhceeeeeecHHH
Confidence 12378999999999999988878888999999998844 89999998888888888877778887
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCCChhHHHHHHHHHHHhhccccCCCCCccccccCCCCccCCCCc
Q 007637 213 QDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDKSLFTSFIQVIVASLRKISLYPSSNTVNYYHAKDSNYVTPTDN 292 (595)
Q Consensus 213 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (595)
.+..+=-.+ ...-..+++.+.+-. +. ...++.-.+...+.+.+. ++..+
T Consensus 196 y~~~~~~~~---~~ghT~LG~~l~~~~-~t---------c~~slical~lg~~D~rA-----erilh------------- 244 (459)
T KOG4686|consen 196 YDTMGRMFP---GVGHTLLGLWLCFEV-KT---------CKQSLICALSLGLSDDRA-----ERILH------------- 244 (459)
T ss_pred HHHHHHhcc---cchHHHHHHHHHHHH-HH---------HHHHHHHHHHhhhhhhHH-----HHHHh-------------
Confidence 765331000 000000000000000 00 000000000000000000 00000
Q ss_pred hhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHhhhhhccc-cceeeeeccccCCCCCCCc
Q 007637 293 LRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGIIILLSLNQ-QTFATLQAKTMDRHISPSF 371 (595)
Q Consensus 293 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 371 (595)
+++. ..|. .+++++++.+ ..++|...++....+.- .++........+. .|
T Consensus 245 ---------~e~g-----~~Ge---------~pkLtdv~~f--~ppfw~~~iicv~yyva~fPFi~lg~~fF~~----rf 295 (459)
T KOG4686|consen 245 ---------LEEG-----FLGE---------EPKLTDVNTF--YPPFWVLVIICVLYYVAWFPFITLGPMFFQK----RF 295 (459)
T ss_pred ---------hhcC-----cccC---------Cccccccccc--CccHHHHHHHHHHHHHHHHHHhhhhHHHHHH----hh
Confidence 0000 0000 0111222221 11222211111111111 1110111111122 23
Q ss_pred ccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCC
Q 007637 372 QIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEP 451 (595)
Q Consensus 372 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (595)
++++...++++...-.+..+ ...+...+.+|.+++- ..+..+.+....+-....+.
T Consensus 296 GlS~~~a~~i~s~vy~Isav-~spvfg~i~Dk~G~n~------~wv~~a~~~tl~~H~~l~Ft----------------- 351 (459)
T KOG4686|consen 296 GLSAVSAGNILSTVYGISAV-LSPVFGAISDKYGFNL------WWVASACILTLLGHSGLFFT----------------- 351 (459)
T ss_pred CCChhhccchhhhhhhhhhh-hhhhHHHhHhhhccee------hhHHHHHHHHHHHhhhHHhh-----------------
Confidence 35555555555544333332 1223444577776652 22333333333333333332
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCccc
Q 007637 452 QKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWL 531 (595)
Q Consensus 452 ~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~ 531 (595)
.+-.-..+.++|++..+.....|-.++...|++.-|++.|..+..+++|-.+.+.+.+.+.+..+ ++
T Consensus 352 -------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g-----~y- 418 (459)
T KOG4686|consen 352 -------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG-----SY- 418 (459)
T ss_pred -------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC-----ch-
Confidence 22234567788888888888889999999999999999999999999999999999998875321 11
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 007637 532 SSNLNKGHLDYFYWLLMAMCLVNFGYFLVCC 562 (595)
Q Consensus 532 ~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~ 562 (595)
.+.+.+|...+.+++....+.+.+.
T Consensus 419 ------~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 419 ------DNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHhhee
Confidence 2345677777777777665555443
No 131
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.31 E-value=1.4e-11 Score=132.70 Aligned_cols=159 Identities=9% Similarity=0.025 Sum_probs=124.1
Q ss_pred hhhchHHHHHHhhhh---cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCC
Q 007637 48 SYGLLPNMIFYLMNG---YHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQ 124 (595)
Q Consensus 48 ~~~~~~~l~~yl~~~---l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~ 124 (595)
+......++.|+.+. .+.+..+.+.+.++..++..++.+++|+++||+ |||+.+.++.++..++..+.++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~---- 313 (420)
T PRK09528 239 YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT---- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc----
Confidence 333444566666554 366777889999999999999999999999995 999999998888888777766543
Q ss_pred CCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH-HHHHHhhhhH
Q 007637 125 LKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW-YYASTSVSGM 203 (595)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~ 203 (595)
+.+.+++.+++.+++.+...+....++.+.+|++ .|++.++. ++...++|..
T Consensus 314 --------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-------~~a~~~~~~~~~~~~lg~~ 366 (420)
T PRK09528 314 --------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVR-------LSATIYLVGFQFAKQLGAV 366 (420)
T ss_pred --------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc-------ceeeeeeehHHHHHHHHHH
Confidence 4566778888888888777777778888888873 36776655 5567789999
Q ss_pred HHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 204 LAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 204 ~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
++|.+.|++.+..||+..|.+.+++.++..++.++
T Consensus 367 ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 367 FLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877766655555444
No 132
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.30 E-value=6.2e-11 Score=126.75 Aligned_cols=165 Identities=14% Similarity=-0.010 Sum_probs=125.7
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWST 119 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~ 119 (595)
..++....++....+++.|+.+ .|++..+.+.+.+.+.++..++.+++|+++||+ |||+.+..+.+...++...+.+.
T Consensus 228 ~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~ 305 (406)
T PRK11551 228 SYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAAA 305 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444455666777788888765 799999999999999999999999999999995 99999988766666655544432
Q ss_pred cccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHh
Q 007637 120 AMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTS 199 (595)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 199 (595)
. +...+.+..++.|++.++..+...++..|.+|+ +.|++..++.+....
T Consensus 306 ~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~ 354 (406)
T PRK11551 306 P------------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPT-------QVRGTGVGAAVAVGR 354 (406)
T ss_pred C------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcch-------hhhhhhhhHHHHhhh
Confidence 2 344455666677887777778888999999988 448999999999999
Q ss_pred hhhHHHHHHHHHhhccc-chhHHHHHHHHHHHHHHHHHH
Q 007637 200 VSGMLAFTIIVYIQDHL-GWKIGFGVRAILMVLSTLMFL 237 (595)
Q Consensus 200 ~g~~~~p~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~ 237 (595)
+|..++|.++|++.++. +|...++......+++.+..+
T Consensus 355 ~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 355 LGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998865 455556555544444444433
No 133
>PRK12382 putative transporter; Provisional
Probab=99.29 E-value=8.1e-11 Score=125.35 Aligned_cols=162 Identities=15% Similarity=0.177 Sum_probs=128.7
Q ss_pred HHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccc
Q 007637 43 FEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMI 122 (595)
Q Consensus 43 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~ 122 (595)
+....+..+..+.+.|+.+ .|++ +.+...+.+.++..++.++.|++.||+ ||||.+..+..+..++..+..+..
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~-- 300 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP-- 300 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc--
Confidence 3345555666777788764 4665 355666777888889999999999995 999999998888888776655432
Q ss_pred CCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhh
Q 007637 123 PQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSG 202 (595)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 202 (595)
+...+++..++.|++.+...+...+...|.+|+ ++|++.+++++...++|.
T Consensus 301 ----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~ 351 (392)
T PRK12382 301 ----------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPS-------QVRGTALGGYAAFQDIAY 351 (392)
T ss_pred ----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHH
Confidence 355667788888999888888888888888887 558999999999999999
Q ss_pred HHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhh
Q 007637 203 MLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 203 ~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
.++|.+.|++.++.||+..|.+.+++.+++.+..++.
T Consensus 352 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 352 GVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999887777666665543
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.28 E-value=1.7e-10 Score=126.86 Aligned_cols=149 Identities=14% Similarity=0.071 Sum_probs=113.9
Q ss_pred hchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 007637 50 GLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAP 129 (595)
Q Consensus 50 ~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 129 (595)
....++|.|+++++|++..+++.+.+...++..++.+++|+++||+ |||+++.++.++..++.++.....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 4567889999889999999999999999999999999999999995 999998888766555544333211
Q ss_pred CCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHH
Q 007637 130 CNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTII 209 (595)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 209 (595)
..+...+.+..++.+....+..+..++++.|.+|+ +.|++.+++++...++|+.++|++.
T Consensus 363 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~~~g~~lgp~l~ 422 (496)
T PRK03893 363 -------------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDT-------EQRAAGLGFTYNVGALGGALAPILG 422 (496)
T ss_pred -------------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCH-------HHhhcccchhhhhhhHHHHHHHHHH
Confidence 01233333444443333333456677888898888 4589999999999999999999999
Q ss_pred HHhhcccchhHHHHHHHHH
Q 007637 210 VYIQDHLGWKIGFGVRAIL 228 (595)
Q Consensus 210 ~~l~~~~g~~~~f~~~~~~ 228 (595)
|++.+.+||+..+.+.+..
T Consensus 423 g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 423 ALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHHhccCChHHHHHHHHHH
Confidence 9999999999887655443
No 135
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=3.7e-10 Score=117.18 Aligned_cols=140 Identities=11% Similarity=0.115 Sum_probs=102.8
Q ss_pred hhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 007637 49 YGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPA 128 (595)
Q Consensus 49 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 128 (595)
+.-......|....+| +...+-|...+|.+.+......+-|+.|++ |-|...+++..+..+|..+=..+. .|.+++
T Consensus 61 WI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~~- 136 (480)
T KOG2563|consen 61 WIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVPP- 136 (480)
T ss_pred heeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Cccccc-
Confidence 3334555667777788 777788999999999999999999999996 999999999999999987755543 332211
Q ss_pred CCCccccCCCCCCCchhHH--HHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHH
Q 007637 129 PCNQLVSSNCSSATPAQFA--ILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAF 206 (595)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 206 (595)
.++ ....+-.+.+.++-.+.....-+-+-+|++++ |+++..+-.+++.+|.+++.
T Consensus 137 ----------------~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q-------ra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 137 ----------------LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ-------RAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred ----------------cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch-------hhhhhhHHHhcchHHHHHHh
Confidence 333 55566666666655554444555667888844 78888887777778888888
Q ss_pred HHHHHhhcc
Q 007637 207 TIIVYIQDH 215 (595)
Q Consensus 207 ~~~~~l~~~ 215 (595)
++.+.+..+
T Consensus 194 llppilV~~ 202 (480)
T KOG2563|consen 194 LLPPILVPS 202 (480)
T ss_pred hccceecCC
Confidence 777777654
No 136
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.28 E-value=1.2e-10 Score=122.78 Aligned_cols=177 Identities=16% Similarity=0.092 Sum_probs=127.3
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH-HHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVI-LLGSFSSL 110 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~-~~~~~~~~ 110 (595)
+..+......++.....+.+..+++.|+.+.+|.+..+.+++.+...++..++.+++|+++||+ |||+.. ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 3455566677777788888888999999999999999999999999999999999999999995 998611 11111111
Q ss_pred HH---HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 111 LG---TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 111 l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
++ ..+..+.. .. ..+.........+.+.+.+ ..+...++..|.+|+ +.|
T Consensus 294 ~~~~~~~~~~~~~--~~------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~ 345 (399)
T TIGR00893 294 IAGLVLSLLMFAT--NY------------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPG-------NIA 345 (399)
T ss_pred HHHHHHHHHHHHh--cc------------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcCh-------hHH
Confidence 11 11111111 00 0122333333333344444 678899999999998 458
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHHH
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDHLG-WKIGFGVRAILMVLSTLMFL 237 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~ 237 (595)
++.+++.+...++|..++|.+.|++.+..| |+..|++.++..+++.+..+
T Consensus 346 g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 346 GLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888 99999888777666655543
No 137
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.28 E-value=1e-10 Score=124.92 Aligned_cols=166 Identities=13% Similarity=0.067 Sum_probs=126.8
Q ss_pred HHHHHHhhhchHHHHHHhhhhcCCchh---hHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007637 42 SFEKVASYGLLPNMIFYLMNGYHVEAA---NGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWS 118 (595)
Q Consensus 42 ~~~~~~~~~~~~~l~~yl~~~l~~s~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~ 118 (595)
++.......+.++++.|+.+..+.... ..+.+.++..++..++.++.|+++||+ |||+++..+.+...++.+.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSF 307 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHH
Confidence 333344445567777887765443221 245556667778888899999999995 9999999988877766655544
Q ss_pred hcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHH
Q 007637 119 TAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAST 198 (595)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 198 (595)
.. +.+.+++.+++.|++.+...|...+++.+..|+ +.|++.+++++...
T Consensus 308 ~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~ 356 (408)
T PRK09874 308 VQ------------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSN-------QIAGRIFSYNQSFR 356 (408)
T ss_pred hc------------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCc-------ccceeeehHHHHHH
Confidence 32 456677888899999999999988888887776 33789999999999
Q ss_pred hhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhh
Q 007637 199 SVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 199 ~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
++|..+||.++|++.+.+||+..|++.+++.+++.+..++.
T Consensus 357 ~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 357 DIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888777766665543
No 138
>PRK03545 putative arabinose transporter; Provisional
Probab=99.27 E-value=2.9e-10 Score=121.08 Aligned_cols=172 Identities=9% Similarity=-0.036 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTL 116 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~ 116 (595)
.....++.....+....+++.|+.+.+|.+..+++++.+...++..++.+++|+++||+ |||++. .+..+..++....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~~~l 287 (390)
T PRK03545 210 LYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCLLLL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHHHHH
Confidence 33444445555566667888888888999999999999999999999999999999995 987654 4444444433332
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
.... .+...+++..++.|++.+...+...+.+.+..|+ . |+++++++..
T Consensus 288 ~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~-------~~~~~g~~~~ 336 (390)
T PRK03545 288 LPAA-----------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-A-------TDVAMALFSG 336 (390)
T ss_pred HHHh-----------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-c-------HHHHHHHHHH
Confidence 2111 1455667777888888877777777777776553 2 6888999888
Q ss_pred HHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 197 STSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
..++|..+||+++|++.+++|++..|++.+++.+++++......+
T Consensus 337 ~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 337 IFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 889999999999999999999999999988887777777665543
No 139
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.27 E-value=2.3e-11 Score=108.47 Aligned_cols=134 Identities=21% Similarity=0.259 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHH
Q 007637 74 LSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSF 153 (595)
Q Consensus 74 ~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (595)
.+.+.++..++.++.|+++||+ |||+.+..+.....++.+.+.... +...+.+.+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~ 58 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS------------------------NITVLIIAR 58 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc------------------------cHHHHHHHH
Confidence 3456677888999999999995 999999999888888777666543 466778889
Q ss_pred HHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 154 ALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLST 233 (595)
Q Consensus 154 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~ 233 (595)
++.|++.+...+...++..|.+|+ +.|++..++.+...++|..++|.+.+++.+..+|++.|++..+..+++.
T Consensus 59 ~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 59 FLQGFGAAFALVAGAALIADIYPP-------EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAF 131 (141)
T ss_pred HHHHHHHHHHHHhHHHHHHHHCCh-------hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHH
Confidence 999999999889999999999998 4489999999999999999999999999998899999988777666555
Q ss_pred HHHHhh
Q 007637 234 LMFLFG 239 (595)
Q Consensus 234 ~~~~~~ 239 (595)
+..++.
T Consensus 132 ~~~~~~ 137 (141)
T TIGR00880 132 ILLAFL 137 (141)
T ss_pred HHHhhc
Confidence 554443
No 140
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.26 E-value=8.2e-11 Score=125.11 Aligned_cols=157 Identities=14% Similarity=0.091 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTL 116 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~ 116 (595)
......+.....+....+++.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.+...+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHH
Confidence 33344444555566677889999999999999999999999999999999999999995 99999988876543332222
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
.... .+...+.+..++.++..+...+...+++.|.+|+ +.|++.+++.+.
T Consensus 322 ~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~ 371 (405)
T TIGR00891 322 FAIG-----------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPT-------DQRAAGLGFTYQ 371 (405)
T ss_pred HHhC-----------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCc-------chhHHHhhHHHH
Confidence 1111 1344455555666666677778888899999988 448999999999
Q ss_pred HHhhhhHHHHHHHHHhhcccc-hhHHHHH
Q 007637 197 STSVSGMLAFTIIVYIQDHLG-WKIGFGV 224 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~~~~g-~~~~f~~ 224 (595)
..++|..++|.+.|++.++.| |...+..
T Consensus 372 ~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 372 LGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 999999999999999999988 8766654
No 141
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.25 E-value=2.1e-10 Score=121.98 Aligned_cols=169 Identities=10% Similarity=0.014 Sum_probs=139.4
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|..+......++...+.....++.+.|+++ +|.++.+.+.+.++..++..++.++.|++.||+ |+|+++.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 445555566666677777888899999965 899999999999999999999999999999996 999999999999998
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
...+.++.. +.+.+++..++.|+..|...+....++.+. |+ +.|+++.
T Consensus 283 ~~~~~~~~~------------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~-------~~~~~~q 330 (382)
T TIGR00902 283 RWAIIGAIE------------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PG-------SEIAKLQ 330 (382)
T ss_pred HHHHHHhHh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CH-------hhHHHHH
Confidence 888777644 677788899999999999999999999876 66 3478889
Q ss_pred HHHH-HHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Q 007637 192 NWYY-ASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 192 ~~~~-~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (595)
++++ ....+|..++|.++|++.++.|+ ..|++.+++.++++++
T Consensus 331 ~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 331 ALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9876 45679999999999999999986 5566666655555443
No 142
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.25 E-value=1.5e-10 Score=123.98 Aligned_cols=176 Identities=14% Similarity=0.089 Sum_probs=127.9
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHH-HHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVIL-LGSFSSLL 111 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~-~~~~~~~l 111 (595)
..+......++....++++..++|.|++ ++|++..+.+.+.+...++..++.++.|+++||+ |||+.+. .+.+...+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~ 300 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGI 300 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHH
Confidence 3455555667777888888899999985 5899999999999999999999999999999995 9988764 33333333
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+...+...... ...+....++..++.|++.+...+ ..+...+..|+ .|++++
T Consensus 301 ~~~~l~~~~~~-------------------~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~--------~~g~~~ 352 (402)
T TIGR00897 301 FTLALYYIPQH-------------------FGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAPK--------HKGAAM 352 (402)
T ss_pred HHHHHHHHHHc-------------------cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcc--------hhHHHH
Confidence 33232221100 011345556677777887776544 34555554332 279999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
++.+...++|..++|.+.+++.+.+||...|++.+++.+++.+...+
T Consensus 353 g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 353 SVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888777666555444
No 143
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.24 E-value=2.5e-10 Score=123.58 Aligned_cols=179 Identities=15% Similarity=0.065 Sum_probs=118.1
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhccc-chhHHH-HHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYM-GRFWVI-LLGSFSSL 110 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~-~~~~~~~~ 110 (595)
.++......++....++.+.++++.|+.+++|++..+++...+.+.++..++.+++|+++||+. ++|+.. ....+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 3444444555556666777889999998889999999999999999999999999999999952 222222 22111111
Q ss_pred HHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhH
Q 007637 111 LGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETF 190 (595)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (595)
+....+.... . .+.....+..++.|++............+|.+|+ +.|++.
T Consensus 324 ~~~~~~~~~~---~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~ 374 (434)
T PRK11663 324 LSVGSLWLMP---F-------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHK-------EAAGAA 374 (434)
T ss_pred HHHHHHHHcc---c-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccH-------hhHHhH
Confidence 1111111111 0 0122222333334433222112234456777776 448999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhC
Q 007637 191 FNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGS 240 (595)
Q Consensus 191 ~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 240 (595)
.++.+...++|..++|.+.|++.++.||+..|++.+++.+++.+..+...
T Consensus 375 ~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 375 TGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988877666655544433
No 144
>PRK15075 citrate-proton symporter; Provisional
Probab=99.24 E-value=8e-11 Score=127.39 Aligned_cols=153 Identities=16% Similarity=0.123 Sum_probs=109.2
Q ss_pred HHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH-HH
Q 007637 38 IVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTT-TL 116 (595)
Q Consensus 38 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~-~~ 116 (595)
....++....++.+..++|.|+++.+|++..+.++...++.++..++.+++|+++||+ |||++++++.+..++... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3444455667778888999999988999999999998899999999999999999995 999998876554332221 11
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
.... . ..+.....+..++.+++.|...+...++..|.+|++ .|+++.++.+.
T Consensus 323 ~~~~--~-------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~-------~rg~~~g~~~~ 374 (434)
T PRK15075 323 SWLV--A-------------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAE-------VRTAGFSLAYS 374 (434)
T ss_pred HHHH--c-------------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCC-------ccchheeHHHH
Confidence 1111 0 012222333344556666666666778889999984 47888888665
Q ss_pred HHh-hhhHHHHHHHHHhhcccchh
Q 007637 197 STS-VSGMLAFTIIVYIQDHLGWK 219 (595)
Q Consensus 197 ~~~-~g~~~~p~~~~~l~~~~g~~ 219 (595)
... +++.++|.+.+++.++.|++
T Consensus 375 ~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 375 LATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHhhhHHHHHHHHHHhcCCc
Confidence 444 45788999999999988853
No 145
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=8.4e-11 Score=121.21 Aligned_cols=181 Identities=17% Similarity=0.141 Sum_probs=138.7
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhccc-chhHHHHHHHH-HH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYM-GRFWVILLGSF-SS 109 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~~~~~~-~~ 109 (595)
|.+|++.+..++--+.-|++..|.|.|+.|..|+|..++++..+.+-++...+.+++||+|||++ |||....+... +.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 67788888888888888999999999999999999999999999999999999999999999987 77765544433 33
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
.++.+....++ ..+..+..+..+.+|+-..+-.-.+.....|..|.+. -|+
T Consensus 332 ~~~~~~~w~~~----------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A-------aGt 382 (448)
T COG2271 332 TASLVLYWLAP----------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA-------AGT 382 (448)
T ss_pred HHHHHHHHcCC----------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh-------ccc
Confidence 33333333322 1255666667677776655433344555667777744 699
Q ss_pred HHHHHHHHHhh-hhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 190 FFNWYYASTSV-SGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 190 ~~~~~~~~~~~-g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
+.|+...+..+ |..++....|++.|.+||...|.+..+..+++.+.+....+
T Consensus 383 A~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 383 ATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred hhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 99998888887 88888888999999999999999887777777666655443
No 146
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.24 E-value=2.3e-10 Score=123.02 Aligned_cols=163 Identities=10% Similarity=0.035 Sum_probs=130.5
Q ss_pred hhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 007637 48 SYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKP 127 (595)
Q Consensus 48 ~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 127 (595)
..+...+++.|+++.+|.++.+.+++.+...++..++.+++|+++||. ++++.+..+.++.+++.++..+..
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc-------
Confidence 345667788999888999999999999999999999999999999995 888888888777777766554432
Q ss_pred CCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHH
Q 007637 128 APCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFT 207 (595)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 207 (595)
+....++..++.|++.+...+...+++.|..|+ +.|++.+++++...++|..++|.
T Consensus 311 -----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~~g~~ 366 (417)
T PRK10489 311 -----------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPD-------EMLGRINGLWTAQNVTGDAIGAA 366 (417)
T ss_pred -----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH-------HHHHHHHHHHHHHHhhhHhHHHH
Confidence 445566777778888877767777888888888 66999999999999999999999
Q ss_pred HHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 208 IIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 208 ~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
+.|++.+.+|++..+++.+++.++..++.....++
T Consensus 367 l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 367 LLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999888887766555544444444343
No 147
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.22 E-value=6.4e-10 Score=118.12 Aligned_cols=155 Identities=17% Similarity=0.217 Sum_probs=119.8
Q ss_pred HHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 007637 46 VASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQL 125 (595)
Q Consensus 46 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~ 125 (595)
+.+.....+++.|+++ .|.++.+.+.+.+...++..++.++.|+++||+ |||+++..+..+..++..... .
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~--~----- 284 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML--S----- 284 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh--h-----
Confidence 3444455678888865 699999999999999999999999999999996 999999888777776654432 1
Q ss_pred CCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHH
Q 007637 126 KPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLA 205 (595)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 205 (595)
........++.+++.+...|...+.+.|..|++ +++...+.++...++|..++
T Consensus 285 --------------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~~lG~~ig 337 (381)
T PRK03633 285 --------------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHH-------ELVAMNQALLLSYTVGSLLG 337 (381)
T ss_pred --------------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 112334556677777777888888888888773 35667777777889999999
Q ss_pred HHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 206 FTIIVYIQDHLGWKIGFGVRAILMVLSTLMF 236 (595)
Q Consensus 206 p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 236 (595)
|.++|++.+++||++.|.+.+.+.+++.+..
T Consensus 338 p~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 338 PSFTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998777666554443
No 148
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.21 E-value=3.4e-08 Score=106.48 Aligned_cols=358 Identities=13% Similarity=0.078 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHhhhch---HHHHHHhhhhcCCchhhH-HHHHHHH----HHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLL---PNMIFYLMNGYHVEAANG-ASMLSIW----SSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~---~~l~~yl~~~l~~s~~~~-~~~~~~~----~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
+....+.+.++++... .....+.....+.+.... +...... .+...+..++-|.++||+ |||..+.+..+.
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHH
Confidence 3334455555554444 555556555554443332 2222222 567788889999999997 999999998887
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHH--HhccCCccchhhhhcccCCCCCCcchhhh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALIS--IGAGCVRPCSIAFGADQLDNKDNPKNKRV 186 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (595)
..+..+.+.+. .+.+++ +.+ -+.+.......++++|.... +.
T Consensus 102 ~~l~~~~~~~~--------------------------~~~~~~---~~~l~g~~~~~~s~~~a~vadis~~-------~~ 145 (463)
T KOG2816|consen 102 TILPALCLLFQ--------------------------GYWFFL---LLGLSGGFSAIFSVGFAYVADISSE-------EE 145 (463)
T ss_pred HHHhHHHHHHH--------------------------HHHHhh---hcccccchhhhhhhhhhheeeccch-------hH
Confidence 77776555442 122222 333 23334566778888888887 44
Q ss_pred HhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccccCCCC-ChhHHHHHHHHHHHh
Q 007637 187 LETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQPDK-SLFTSFIQVIVASLR 265 (595)
Q Consensus 187 r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 265 (595)
|...+++.......+..++|.+++++.+..|...+|.++.+..++..+..++..++...++... .+
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~------------- 212 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDAT------------- 212 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccc-------------
Confidence 8999999998889999999999999999999999999999888888777777666543322111 00
Q ss_pred hccccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhhhHh
Q 007637 266 KISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCSTGII 345 (595)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 345 (595)
.+...+++ ....+ ..+++..... ....|..+..+.... ..
T Consensus 213 -~~~~~~~~---~~~~~--------------------------------~~~~~~~~~~--~~~~r~~l~l~l~~~--~~ 252 (463)
T KOG2816|consen 213 -LRELTPGS---LDSSH--------------------------------VADAFQSLTK--VGPDRLLLLLLLVAF--LS 252 (463)
T ss_pred -ccccCCCc---ccchh--------------------------------hhhhhhhhcc--cCCCccchHHHHHHH--HH
Confidence 00000000 00000 0000000000 011122211111111 11
Q ss_pred hhhhccc-c-ceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHH
Q 007637 346 ILLSLNQ-Q-TFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLL 423 (595)
Q Consensus 346 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l 423 (595)
...-... . ..+++....+.-+- ...+.+.....+...+... +..+++.+. ++..+.+..|+..
T Consensus 253 ~~~~~~~~~~~~~~yl~~~f~w~~-----~~~s~~~~~~~~~~~i~~l----~~~~~l~~~------l~~~~~i~lGl~~ 317 (463)
T KOG2816|consen 253 SLPEAGGASDVLLLYLKAKFGWNK-----KEFSDLLSLVSILGIISQL----LLLPLLSSI------LGEKRLISLGLLS 317 (463)
T ss_pred HHHHhcCceeEEEEEEeeecCcCH-----HHHHHHHHHHHHHHHHHHH----HHHHHHHHH------HhhhhHhhHHHHH
Confidence 1111111 1 22233322111110 0011122222222222222 222223332 2222477888888
Q ss_pred HHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHH
Q 007637 424 SAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLG 503 (595)
Q Consensus 424 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~ 503 (595)
-.+...+.++.+ +.|.+....+ .........|...++......++.+|+++++....
T Consensus 318 ~~~~~~~~af~~----------------------~~w~~~~~~v-~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i 374 (463)
T KOG2816|consen 318 EFLQLLLFAFAT----------------------ETWMMFAAGV-VVALAGIVFPAIRAFASILVSPEEQGKVFGIISGI 374 (463)
T ss_pred HHHHHHHHHHhc----------------------cchhhhHHHH-HHHhhcchhHHHHhHHHhhcccccccchhhHHHHH
Confidence 888888888876 3344344433 33444677899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 007637 504 MAVANLLGGLLVKIVDRVT 522 (595)
Q Consensus 504 ~~lg~~~g~~l~~~i~~~~ 522 (595)
..+.+.+++.+.+.+...+
T Consensus 375 ~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 375 EGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHhhhhhHHHHHHHHHHH
Confidence 9999999999999888766
No 149
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.20 E-value=4.8e-10 Score=121.97 Aligned_cols=178 Identities=14% Similarity=0.150 Sum_probs=120.2
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhccc-chhHHH-HHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYM-GRFWVI-LLGSFSS 109 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~-~~~~~~~ 109 (595)
+.++...+..++....++++..++|.|+++..|++..+++.....+.++..++.+++|+++||+. |||+.. +....+.
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 34555566666667777888899999999999999999999999999999999999999999941 344332 2222233
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
.++.....+.. . .+.....+..++.|.+..........+..|.+|+ +.|++
T Consensus 333 ~~~~~~~~~~~--~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~g~ 383 (452)
T PRK11273 333 TIATIVYWLNP--A--------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPK-------KAAGT 383 (452)
T ss_pred HHHHHHHHHhc--c--------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCh-------hhhhh
Confidence 33332222211 0 1223333444444443322222334456788888 44899
Q ss_pred HHHHHHHHHhhhhH-HHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 190 FFNWYYASTSVSGM-LAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 190 ~~~~~~~~~~~g~~-~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
+.++.+...++|+. ++|.+.|++.++.||+..|++.++..+++.+....
T Consensus 384 ~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 384 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 99999888888765 47999999999999999998887766666555443
No 150
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.19 E-value=5.3e-09 Score=108.18 Aligned_cols=344 Identities=15% Similarity=0.123 Sum_probs=189.6
Q ss_pred hchHHHHHHhhhhcCC---ch----hhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHH-HHHHHHHHHHHHHhcc
Q 007637 50 GLLPNMIFYLMNGYHV---EA----ANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLG-SFSSLLGTTTLWSTAM 121 (595)
Q Consensus 50 ~~~~~l~~yl~~~l~~---s~----~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~-~~~~~l~~~~~~~~~~ 121 (595)
.++.++|+|+++..+- ++ +..+...++..+..++..|+-|-++|+. |+||-.+.- .++..+.+..+++..
T Consensus 33 vtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~- 110 (438)
T COG2270 33 VTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIP- 110 (438)
T ss_pred eeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhC-
Confidence 3456788888876554 33 3345667788888888999999999996 877655444 444455555555543
Q ss_pred cCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhh
Q 007637 122 IPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVS 201 (595)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 201 (595)
+ +...+...+..++..++.........+++.|..++++ -++..+.-+....+|
T Consensus 111 -~-------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~-------~~riS~lg~~~gylg 163 (438)
T COG2270 111 -P-------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN-------MGRISGLGWALGYLG 163 (438)
T ss_pred -C-------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc-------cCccccccccccccc
Confidence 1 1245666677777888888888888999998888755 244445555555666
Q ss_pred hHHHHHHHH--Hh-h---------------cccchhHHHHHHHHHHHHHHHHHHhhCccccccC-CCCChhHHHHHHHHH
Q 007637 202 GMLAFTIIV--YI-Q---------------DHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKVQ-PDKSLFTSFIQVIVA 262 (595)
Q Consensus 202 ~~~~p~~~~--~l-~---------------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 262 (595)
+.+.-++.- .+ . +.-.-|..+.++++..++..+-+++..++..+.. +.+..+..-++.+..
T Consensus 164 s~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~ 243 (438)
T COG2270 164 SVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPTALRNGFKELKS 243 (438)
T ss_pred chHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccchHHHHHHHHHHHH
Confidence 655544321 11 1 1223566777777766655555555554433221 221222222222222
Q ss_pred HHhhccccCCCCCccccccCCCCccCCCCchhhhhhhhcccCCCCCCCCCCCCCCCCccccchhhhhhhHHHhHHhhhhh
Q 007637 263 SLRKISLYPSSNTVNYYHAKDSNYVTPTDNLRFLNKACMIENPEEDLNPDGTASNPWKLCSIGQVESLKALLRITPMCST 342 (595)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 342 (595)
.+++. .++|.++..+....
T Consensus 244 t~k~i------------------------------------------------------------~~~~~i~~FLiA~~- 262 (438)
T COG2270 244 TFKEI------------------------------------------------------------RGRKNLVLFLIARF- 262 (438)
T ss_pred HHHHH------------------------------------------------------------hcccchHHHHHHHH-
Confidence 22211 11122211111110
Q ss_pred hHhhhhhccc--cceeeeeccccCCCCCCCcccccccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHH
Q 007637 343 GIIILLSLNQ--QTFATLQAKTMDRHISPSFQIPAGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIG 420 (595)
Q Consensus 343 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 420 (595)
.|.- ++........-... ++++...+..+..+..+.. ..+.+..+.+++ | ++.++.+.++
T Consensus 263 ------~~~DGv~til~~~~~fg~~~----~gls~~~lll~g~~~~vvA--~lg~ii~g~Ld~---r---fg~k~vl~~~ 324 (438)
T COG2270 263 ------FYIDGVNTILAMGGVFGAAD----LGLSSTELLLIGIALSVVA--ALGAIIAGFLDE---R---FGSKPVLMIG 324 (438)
T ss_pred ------HHHhhHHHHHHHHHHHHHHH----cCccHHHHHHHHHHHHHHH--HHHHHHHHHHHH---H---hCCceeehHH
Confidence 0000 11100000000000 1122222222222222211 122233332332 2 4444577777
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHH
Q 007637 421 LLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIF 500 (595)
Q Consensus 421 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~ 500 (595)
+++..+..+...+.. ... ...+.-++.|.+.+.....+-++..+.+|++..+...|++
T Consensus 325 lvi~~~~~~~~~~~~---------------------~~~-~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFgly 382 (438)
T COG2270 325 LVILSIAALYLIFLE---------------------GEL-DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLY 382 (438)
T ss_pred HHHHHHHHHHHHHcc---------------------ccH-HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehh
Confidence 776665555444332 111 1222335677777888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhc
Q 007637 501 TLGMAVANLLGGLLVKIVDRVTR 523 (595)
Q Consensus 501 ~~~~~lg~~~g~~l~~~i~~~~~ 523 (595)
++....+.++||.+++.+.+.++
T Consensus 383 altgra~S~~gp~lv~v~t~iTg 405 (438)
T COG2270 383 ALTGRAASFLGPFLVAVITQITG 405 (438)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999988774
No 151
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.18 E-value=2.7e-10 Score=124.05 Aligned_cols=173 Identities=12% Similarity=0.080 Sum_probs=132.8
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcc-cchhHHHHHHH--HH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSY-MGRFWVILLGS--FS 108 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~Grr~~~~~~~--~~ 108 (595)
+..+......++..++++....+++.|+.+ +|++..+++.+.++..++..++.+++|+++||. .++|+...++. +.
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 344555556666677778888889999864 799999999999999999999999999999973 23444443333 33
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
..++.+++.... +.+.+++.+++.|++.+...+...+++.|.+|+ +.++
T Consensus 320 ~~l~~ll~~~~~------------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~-------~~~g 368 (455)
T TIGR00892 320 NGLTHLLCALAG------------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGA-------QRFS 368 (455)
T ss_pred HHHHHHHHHHhc------------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhH-------HHHh
Confidence 333333333322 456677888999999999999999999999988 4489
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhccc-chhHHHHHHHHHHHHHHHHH
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQDHL-GWKIGFGVRAILMVLSTLMF 236 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~ 236 (595)
+.+++++...++|..++|.++|++.+.. +|+..|++.+++.+++.+..
T Consensus 369 ~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 369 SAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFL 417 (455)
T ss_pred hHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHH
Confidence 9999999999999999999999998877 59999998887666555443
No 152
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.18 E-value=9.5e-10 Score=120.89 Aligned_cols=173 Identities=12% Similarity=0.101 Sum_probs=124.7
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHH-HHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLS-IWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWS 118 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~-~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~ 118 (595)
..++...+.+....+.++|+.+++|++..+.+.+.. ...++..++.+++|+++||+ ||||.+.++.++.+++.+....
T Consensus 230 ~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~ 308 (491)
T PRK11010 230 LIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWL 308 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHH
Confidence 334555565666678888988889999999999874 55678999999999999995 9999887766655554433221
Q ss_pred hcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHH
Q 007637 119 TAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAST 198 (595)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 198 (595)
..... .+...+.+..++..+..|...+...++..+..+++. +++.+++.+...
T Consensus 309 l~~~~--------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~-------~~t~~gl~~s~~ 361 (491)
T PRK11010 309 LSITD--------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF-------SATQFALLSALS 361 (491)
T ss_pred HHhcc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-------cHHHHHHHHHHH
Confidence 11000 123334444555444445445666777778887743 688899999888
Q ss_pred hhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhC
Q 007637 199 SVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGS 240 (595)
Q Consensus 199 ~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 240 (595)
++|..+++.+.|++.+.+||+..|.+.+++.+++++.....+
T Consensus 362 ~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 362 AVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888999999999999999988888777766665543
No 153
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.17 E-value=8.3e-10 Score=119.38 Aligned_cols=169 Identities=15% Similarity=0.036 Sum_probs=110.3
Q ss_pred HHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH-h
Q 007637 41 ESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWS-T 119 (595)
Q Consensus 41 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~-~ 119 (595)
.++....+|.+.+++|.|+.+.+|++..+.+...++..++..++.++.|+++||+ |||+++.++.++.++....... .
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344677888899999999999999999999988888888889999999999995 9999887766544333222211 1
Q ss_pred cccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHh
Q 007637 120 AMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTS 199 (595)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 199 (595)
... .+....+....+..++.+...+...++..|.+|+ +.|++++++.+...+
T Consensus 331 ~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~-------~~r~t~~g~~~~~g~ 382 (432)
T PRK10406 331 QNV---------------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPA-------QVRALGVGLSYAVAN 382 (432)
T ss_pred HcC---------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------CccchhhhHHHHHHH
Confidence 100 0112111111222223333334567788999999 448999999886655
Q ss_pred h-hhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 200 V-SGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 200 ~-g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
+ ++..+|.+.+++.....|...+++.++..+++.+..++
T Consensus 383 ~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 383 ALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 4 45568888886654333666666665555555555444
No 154
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.16 E-value=1.3e-09 Score=118.43 Aligned_cols=186 Identities=13% Similarity=0.114 Sum_probs=151.3
Q ss_pred CCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchh--HHHHHHHH
Q 007637 30 SLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRF--WVILLGSF 107 (595)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~~~~~~~ 107 (595)
+.|.+...++..++.+-+...+..+...|.++++|++..+...+..+..+...++.+++|++.||+ |.| ++++++++
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 346666667777888888888889999999999999999999999999999999999999999995 999 89888887
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
+..+..+...+.. .+. ..+..+.+.+++.-++.|+..|...+..-++.+++.|+++ .
T Consensus 358 ~~~~i~~~g~~G~-~~~---------------~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~-------e 414 (477)
T PF11700_consen 358 LWIIIPLYGLFGF-WPS---------------FFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR-------E 414 (477)
T ss_pred HHHHHHHHHHHHh-hhc---------------ccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch-------h
Confidence 7644433322211 000 0112356778888889999999999999999999999954 6
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHHHhh
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDHLG-WKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
+..||++.+..-..+.+||++.|.+.+..| .|..+....++.+++++++++.
T Consensus 415 ~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 415 AEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 899999999999999999999999998876 8889888777777777776553
No 155
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.16 E-value=7.1e-10 Score=114.56 Aligned_cols=184 Identities=11% Similarity=0.056 Sum_probs=140.7
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+..|.+....+..-=++.++..+++.|+.+++++++.+++.+...+.....+..++||++|||+ |.+|++++.....++
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMAL 296 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHH
Confidence 5667766666666666777889999999999999999999999999999999999999999995 999999999888888
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+..+..+..+... ...+...++...+.+++..|.-......++...+|++ -+...
T Consensus 297 ~~~~l~~~~~~~~-----------------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~--------~G~v~ 351 (417)
T COG2223 297 AAALLSLFLTGFG-----------------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE--------TGAVT 351 (417)
T ss_pred HHHHHHccccccc-----------------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh--------hhHHH
Confidence 8877765431111 0123444444444455555555555667777666663 47888
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLG-WKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
++.....++|+..-|...+...+..| +...|++.....+++.+..+....
T Consensus 352 G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 352 GIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred HHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999888877 999999888877777776555443
No 156
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.16 E-value=1.2e-09 Score=118.29 Aligned_cols=169 Identities=13% Similarity=0.044 Sum_probs=118.3
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCc
Q 007637 53 PNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQ 132 (595)
Q Consensus 53 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 132 (595)
.+...+..+++|++..+.++......++..++.+++|+++||+ |||+.+.++.++.+++..++.+......
T Consensus 304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 374 (481)
T TIGR00879 304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV-------- 374 (481)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc--------
Confidence 3334444567899998889999999999999999999999995 9999999998877777666653210000
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHh
Q 007637 133 LVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYI 212 (595)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l 212 (595)
.+.....+...+....+..+.......+....+..|.+|+ +.|+++.++.+...++|+.++|.+.+++
T Consensus 375 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 375 -----TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPL-------SLRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred -----CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCCh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000222222222222222223346677777999998 5589999999999999999999999999
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 213 QDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 213 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
.++.+|++.|++.+++.+++.+..++..++
T Consensus 443 ~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 443 LESIGVGGVFIFFGGLNVLGLIFVYFFLPE 472 (481)
T ss_pred HHhcCccceehhHHHHHHHHHHHHheeccc
Confidence 998899999988877766666655554443
No 157
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.16 E-value=2e-09 Score=112.28 Aligned_cols=178 Identities=15% Similarity=0.057 Sum_probs=142.7
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+.++..+...++...+.|...+++-+|+++..|+|.+..++++..+.++..++.+++|+++|| +.|+++.....+.++
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 556777778888888999999999999999999999999999999999999999999999999 788888888777777
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
....+.+.. .+.+..++..++.|++.+........-.++..|+ + ++.+.
T Consensus 289 ~~l~l~~~~-----------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~-~-------~~~a~ 337 (394)
T COG2814 289 ALLALTFTG-----------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAPD-A-------ADLAG 337 (394)
T ss_pred HHHHHHHhc-----------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCC-c-------hHHHH
Confidence 766665533 1445556666667777665544444445542223 2 68889
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
+++....|+|..+|..++|.+.+++|+....++.++..+++++..+...++
T Consensus 338 sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 338 SLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999888887776665443
No 158
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.15 E-value=9.4e-10 Score=113.49 Aligned_cols=163 Identities=9% Similarity=0.034 Sum_probs=123.2
Q ss_pred CchhHHHHHHHHHHHHHhhhchHHHHHHhhhh--cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 31 LRTMPFIIVNESFEKVASYGLLPNMIFYLMNG--YHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
.+..+...+..++..-.-.++..|++.|+.+. +|+++.+++...+.+..+..++.+++++++||+ |+||++.++.++
T Consensus 139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l 217 (310)
T TIGR01272 139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFL 217 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Confidence 34455555555555555567778999999854 799999999999999999999999999999995 999999888877
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
.+++..+..... +.. ...+.++.|++.+..+|...++..+.+|++. +
T Consensus 218 ~~~~~~l~~~~~------------------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~--------~ 264 (310)
T TIGR01272 218 AVLLSIGAALTH------------------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT--------S 264 (310)
T ss_pred HHHHHHHHHHcC------------------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--------h
Confidence 777664443321 111 2235557899999999999999888887743 2
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAIL 228 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~ 228 (595)
++.++. ....+|+.+.|.+.|.+.|..|.+.+|++..++
T Consensus 265 ~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 265 QGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred hhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 333443 566799999999999999999988888755443
No 159
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.15 E-value=7.5e-10 Score=107.73 Aligned_cols=173 Identities=16% Similarity=0.132 Sum_probs=134.4
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhH
Q 007637 21 QPPSKPEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFW 100 (595)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~ 100 (595)
.|.........+..|.+..+.++.-.+.+-+.+.-+.+.++++|+|+.+++.+.+.....+....++.|.++|++ |++-
T Consensus 253 ~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~ 331 (459)
T KOG4686|consen 253 EPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNL 331 (459)
T ss_pred CcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-ccee
Confidence 333333333445677777788888888888888889999999999999999999999999999999999999996 9986
Q ss_pred HHHHH-HHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCC
Q 007637 101 VILLG-SFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKD 179 (595)
Q Consensus 101 ~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 179 (595)
..+.+ .+...++...+.++.+. =+++..++|+.......+..++++...|+
T Consensus 332 ~wv~~a~~~tl~~H~~l~Ft~ls--------------------------Py~~m~~lGLsysllAcslWP~va~~vpE-- 383 (459)
T KOG4686|consen 332 WWVASACILTLLGHSGLFFTFLS--------------------------PYTSMTFLGLSYSLLACSLWPCVASLVPE-- 383 (459)
T ss_pred hhHHHHHHHHHHHhhhHHhhhcc--------------------------HHHHHHHHhhhHHHHHHHHhhhhhhhCCH--
Confidence 66554 44566666666664422 34566777888877777778888888888
Q ss_pred CcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccc---hhHHHHHHHH
Q 007637 180 NPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLG---WKIGFGVRAI 227 (595)
Q Consensus 180 ~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g---~~~~f~~~~~ 227 (595)
+..|++++..+...|+|-.+.|+++|.+.++-| |--.|.+...
T Consensus 384 -----~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 384 -----EQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred -----HHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 558999999999999999999999999998754 4445544433
No 160
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.13 E-value=2.9e-08 Score=107.13 Aligned_cols=163 Identities=17% Similarity=0.140 Sum_probs=114.4
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcc--cc--hhHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 007637 53 PNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSY--MG--RFWVILLGSFSSLLGTTTLWSTAMIPQLKPA 128 (595)
Q Consensus 53 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~--~G--rr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 128 (595)
.....|+++++|+++++...+.+...+--.+- ++.|.++|.+ .| ||.-++++.++.+++...++... .
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~---~---- 81 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSIK-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP---A---- 81 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHHh-hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc---c----
Confidence 34456788999999999888777666655544 6889999974 24 44445556555555454444422 1
Q ss_pred CCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHH
Q 007637 129 PCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTI 208 (595)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 208 (595)
...+.....+..++..+|....-...-++++|....+.. . |+...++.+....+|++++..+
T Consensus 82 -------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~----~-~g~lqS~~~~~~~~G~lv~~~l 143 (433)
T PF03092_consen 82 -------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE----S-RGDLQSFVWGVRSVGSLVGSLL 143 (433)
T ss_pred -------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc----h-hHHHHHHHHHHHHHHHHHHHHh
Confidence 011334445566667888888778888888888766543 2 7888889899999999999999
Q ss_pred HHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 209 IVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 209 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
.|.+.+..+++..|.+.+++..+..+..++..+
T Consensus 144 ~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 144 SGPLLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 999999999999998887766655544444443
No 161
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.11 E-value=1.2e-09 Score=118.48 Aligned_cols=182 Identities=15% Similarity=0.077 Sum_probs=120.4
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
.++......++.....+++..++|.|+++..|+++.++++..+.+.++..++.+++|+++||+ |+++....+.....+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 345555555666667788889999999998999999999999999999999999999999995 7554323333222211
Q ss_pred HH-HHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 113 TT-TLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 113 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
.. ...+.. .+. .+.....+..++.|++.............|.+|+ +.|+++.
T Consensus 331 ~~~~~~~~~-~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~ 383 (438)
T TIGR00712 331 TIAVIVYWM-NPA-------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPK-------KAAGTAA 383 (438)
T ss_pred HHHHHHHHh-cCC-------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcCh-------hheeeeh
Confidence 11 111111 000 0222233333444443322222223456788887 4489999
Q ss_pred HHHHHHHhhhh-HHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 192 NWYYASTSVSG-MLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 192 ~~~~~~~~~g~-~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
++.+...++|+ .++|.+.|++.++.||...|++..+..+++.+..++..++
T Consensus 384 g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 384 GFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG 435 (438)
T ss_pred hhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99988878765 6899999999999999999988777666666665555443
No 162
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.10 E-value=2.1e-08 Score=111.28 Aligned_cols=206 Identities=16% Similarity=0.269 Sum_probs=146.4
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+.+..+.....+......+.......-+.+.++++.++.|++.+.+-++..+...+-.|.+-|. =|-|.+-+|.+++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHH
Confidence 4444444444444444446677777888899999999999999999999999999999999995 777888889999999
Q ss_pred HHHHHHHhcccC------------CCCCC-------CCCc---cc---cCCCCC--CCch-hHHHHHHHHHHHHHhccCC
Q 007637 112 GTTTLWSTAMIP------------QLKPA-------PCNQ---LV---SSNCSS--ATPA-QFAILLSSFALISIGAGCV 163 (595)
Q Consensus 112 ~~~~~~~~~~~~------------~~~~~-------~~~~---~~---~~~~~~--~~~~-~~~~~~~~~~l~g~~~g~~ 163 (595)
+.++.++-.... ....| .||+ +. ..++.. .+.. -+.+++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 988876431000 00001 0111 11 112211 1111 3447788999999999999
Q ss_pred ccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcc------------------c-chhHHHHH
Q 007637 164 RPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDH------------------L-GWKIGFGV 224 (595)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~------------------~-g~~~~f~~ 224 (595)
++.-.+++=|-..+++ -...+++.+.+..+|.++|.++++++... . .|+..|++
T Consensus 255 ~tlGisYiDDnvk~~~-------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi 327 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKN-------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLI 327 (735)
T ss_pred ccCCCccccccccccC-------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHH
Confidence 9999999877766644 57889999999999999999999887531 1 38889999
Q ss_pred HHHHHHHHHHHHHhhCccccc
Q 007637 225 RAILMVLSTLMFLFGSHLYIK 245 (595)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~ 245 (595)
.+.+.++..+.++++.++.++
T Consensus 328 ~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 328 CGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHHHHhCcccCcc
Confidence 888888777777666555443
No 163
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.09 E-value=3.2e-09 Score=112.78 Aligned_cols=166 Identities=13% Similarity=0.041 Sum_probs=125.7
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|..+......++....+....++++.|+. +.|.++.+.+.+.++..++..+..++.|++.||+ |+|+++..+.+...+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 33444444555555666666778888885 5899999999999999899999999999999996 999999999888888
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+..+++... +.+.+++..++.|++.+...+....+..+. ++ +.+++..
T Consensus 283 ~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~-------~~~~~~~ 330 (382)
T PRK11128 283 RWGLMGSTT------------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PG-------SEVIRLQ 330 (382)
T ss_pred HHHHHHhhh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CH-------hhhHHHH
Confidence 776665433 567778888999999888888888777664 33 2257778
Q ss_pred HHHH-HHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 192 NWYY-ASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLS 232 (595)
Q Consensus 192 ~~~~-~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~ 232 (595)
+++. ....+|..++|.++|++.+.+|+. .++..+++.+++
T Consensus 331 ~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~ 371 (382)
T PRK11128 331 ALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHH
Confidence 8776 445678899999999999998874 555555554443
No 164
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.08 E-value=8e-10 Score=116.04 Aligned_cols=163 Identities=14% Similarity=0.136 Sum_probs=114.8
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH-HHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF-SSL 110 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~-~~~ 110 (595)
+.++......++.....+.+..+++.|+.+.+|++..+.+...+...++..++.+++|+++||..+||+....... ...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 3445555566666667777888999999999999999999999999999999999999999984233433322211 111
Q ss_pred HHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhH
Q 007637 111 LGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETF 190 (595)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (595)
+......... + ..+.....+..++.|+..+...+....+..|.+|+ +.|+++
T Consensus 296 ~~~~~~~~~~--~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~ 347 (379)
T TIGR00881 296 IVSLLVYWLN--P-------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPK-------KAAGTA 347 (379)
T ss_pred HHHHHHHhcC--c-------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCc-------chhHHH
Confidence 1111111110 0 11334444555566665555555666778888888 448999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHhhcccchhHHH
Q 007637 191 FNWYYASTSVSGMLAFTIIVYIQDHLGWKIGF 222 (595)
Q Consensus 191 ~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f 222 (595)
.++++...++|..++|.+.|++.+++||+..|
T Consensus 348 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 348 AGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999999998764
No 165
>PRK10504 putative transporter; Provisional
Probab=99.07 E-value=3.8e-09 Score=115.46 Aligned_cols=157 Identities=11% Similarity=0.005 Sum_probs=121.5
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
.....+...++..+++.....+.+.|++..+|.++.+.+++.....++..++.++.|+++||+ |||+++..+.++..++
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 262 TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALV 340 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 344445556666666655666778888888999999999999988888888989999999996 9999999888877777
Q ss_pred HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHH
Q 007637 113 TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFN 192 (595)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (595)
..++.+.. . ..+...+.+..++.|++.+...+...++..+.+|+ +.++.+++
T Consensus 341 ~~~~~~~~---~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~ 392 (471)
T PRK10504 341 SLLFMLVA---L------------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPD-------NLASSGNS 392 (471)
T ss_pred HHHHHhcc---c------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH-------HhccchHH
Confidence 66555422 0 01233344556677888888888888888888888 44799999
Q ss_pred HHHHHHhhhhHHHHHHHHHhhcccch
Q 007637 193 WYYASTSVSGMLAFTIIVYIQDHLGW 218 (595)
Q Consensus 193 ~~~~~~~~g~~~~p~~~~~l~~~~g~ 218 (595)
+.+....+|..+|+.++|.+.+..|+
T Consensus 393 ~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 393 LLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999988776555
No 166
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.05 E-value=1.8e-08 Score=103.96 Aligned_cols=84 Identities=6% Similarity=-0.036 Sum_probs=69.1
Q ss_pred hhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcc--------
Q 007637 144 AQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDH-------- 215 (595)
Q Consensus 144 ~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~-------- 215 (595)
.++..++++.+++|.|.+...++.++++++..++++ +++.+++......+|..++|++++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~-------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~ 80 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET-------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQ 80 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch-------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhh
Confidence 367889999999999999999999999999988844 78889999999999999999999977632
Q ss_pred --------cchhHHHHHHHHHHHHHHH
Q 007637 216 --------LGWKIGFGVRAILMVLSTL 234 (595)
Q Consensus 216 --------~g~~~~f~~~~~~~~~~~~ 234 (595)
.+|++++++.+++.++..+
T Consensus 81 ~~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 81 VATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689998865554443333
No 167
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.05 E-value=2.3e-11 Score=133.98 Aligned_cols=189 Identities=19% Similarity=0.286 Sum_probs=2.9
Q ss_pred HHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 007637 46 VASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQL 125 (595)
Q Consensus 46 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~ 125 (595)
....+.......-+.++++++.++.|++.+.+-++..+..++-.|+++|. -|-|.+-+|.++.++|++++++ |++
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l----Phf 90 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL----PHF 90 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc----cHh
Confidence 44455555566677899999999999999999999999999999999994 6778888889999999988763 322
Q ss_pred CCCC----------CCccc-cCCC---------------CC--CC--chhHHHHHHHHHHHHHhccCCccchhhhhcccC
Q 007637 126 KPAP----------CNQLV-SSNC---------------SS--AT--PAQFAILLSSFALISIGAGCVRPCSIAFGADQL 175 (595)
Q Consensus 126 ~~~~----------~~~~~-~~~~---------------~~--~~--~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~ 175 (595)
..++ |+.-. ...| .. .. ..-...++++.++.|+|....++...+++=|..
T Consensus 91 ~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv 170 (539)
T PF03137_consen 91 LSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNV 170 (539)
T ss_dssp -------------------------------------------------------------SSS----------------
T ss_pred hcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccc
Confidence 2111 00000 0011 00 11 113567889999999999999999999998888
Q ss_pred CCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcc---------------------c-chhHHHHHHHHHHHHHH
Q 007637 176 DNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDH---------------------L-GWKIGFGVRAILMVLST 233 (595)
Q Consensus 176 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~---------------------~-g~~~~f~~~~~~~~~~~ 233 (595)
++++ -+...|+++....+|.++|.++++.+... . .|+..|++.+++.++..
T Consensus 171 ~~~~-------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~a 243 (539)
T PF03137_consen 171 SKKN-------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSA 243 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc-------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 8854 57888999999999999999888865421 2 38888888877776666
Q ss_pred HHHHhhCcccccc
Q 007637 234 LMFLFGSHLYIKV 246 (595)
Q Consensus 234 ~~~~~~~~~~~~~ 246 (595)
+.++++.++.++.
T Consensus 244 ipl~~FPk~lp~~ 256 (539)
T PF03137_consen 244 IPLFFFPKKLPGT 256 (539)
T ss_dssp -------------
T ss_pred HHHHcCCccCCCc
Confidence 6666555554443
No 168
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.05 E-value=2.3e-09 Score=114.38 Aligned_cols=169 Identities=8% Similarity=0.047 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHhhhhc---CCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 35 PFIIVNESFEKVASYGLLPNMIFYLMNGY---HVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+......++....+.....+.+.|+.+.+ +.+....+.+.++..+...++.++.|++.||+ |||+.+.++.++.++
T Consensus 218 ~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l 296 (396)
T TIGR00882 218 WMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSV 296 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHH
Confidence 33333344444444445556778877665 55666778888888889999999999999995 999999998888777
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+..+..... +.+.+++..++.|++.+........+..+..++ +.+++..
T Consensus 297 ~~~~~~~~~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~at~~ 345 (396)
T TIGR00882 297 RIIGSSFAT------------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDV-------RLSATIY 345 (396)
T ss_pred HHHHHHhcC------------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------ceEEEee
Confidence 776655433 455567777888877654433344444554454 3356666
Q ss_pred HH-HHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Q 007637 192 NW-YYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 192 ~~-~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (595)
+. ++....+|..++|+++|++.+.+||+.+|.+.+++.++..+.
T Consensus 346 ~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 346 LIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 65 557789999999999999999999999999887766555444
No 169
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.05 E-value=7.7e-09 Score=111.33 Aligned_cols=146 Identities=14% Similarity=0.082 Sum_probs=105.6
Q ss_pred hhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 007637 48 SYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKP 127 (595)
Q Consensus 48 ~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 127 (595)
.+.+..+++.|+.+ .|.++.+.+.+.+...++..++.+++|+++||+ |||+++..+.++..++........ .
T Consensus 247 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~---~--- 318 (426)
T PRK12307 247 NWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP---Q--- 318 (426)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc---c---
Confidence 34456778888875 699999999999999999999999999999995 999999888876665554433221 0
Q ss_pred CCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHH
Q 007637 128 APCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFT 207 (595)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 207 (595)
.....+....+..+++..+..+..+.++.|.+|+ +.|+++.++.+...++|+.++|.
T Consensus 319 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~~~~~gp~ 375 (426)
T PRK12307 319 ----------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPL-------EVRGLGTGLIYNLAATSGTFNSM 375 (426)
T ss_pred ----------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcH-------HHHhhhhhHHHHHHhHHHHHHHH
Confidence 0111121222222223333345566788899998 55899999999999999999999
Q ss_pred HHHHhhcccchhHHHHH
Q 007637 208 IIVYIQDHLGWKIGFGV 224 (595)
Q Consensus 208 ~~~~l~~~~g~~~~f~~ 224 (595)
+.|++.++.|+....++
T Consensus 376 ~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 376 AATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHHHHcccHHHHHHH
Confidence 99999998886654333
No 170
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.05 E-value=4.2e-09 Score=110.01 Aligned_cols=154 Identities=13% Similarity=0.127 Sum_probs=125.1
Q ss_pred hhHHHHHHHHHHHHHhhhch-HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLL-PNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
.++......++....++... .+.+.|.++.+|.+..+.+.+.+...++..++.++.|++.||+ |||+++..+..+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 211 LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHH
Confidence 34444555555566665555 6777887777999999999999999999999999999999995 999999888776666
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.....+.. . +.+.+++..++.|++.+...+...+++.|.+|+ +.|++..
T Consensus 290 ~~~~~~~~~----------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~ 339 (365)
T TIGR00900 290 AILVVGLTP----------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPA-------ELLGRVF 339 (365)
T ss_pred HHHHHHhhc----------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHHHHH
Confidence 665555432 0 256677888889999999999999999999998 5589999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccc
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLG 217 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g 217 (595)
++.+...+++..++|.+.|++.+.+|
T Consensus 340 ~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 340 GAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999988654
No 171
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.04 E-value=1.9e-09 Score=116.46 Aligned_cols=163 Identities=15% Similarity=0.110 Sum_probs=122.4
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|..+......++...+++....+.+.|++..++ +..+.+.+.++..++..++.+++|+++||+ |||+++.++.++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 344445555666666666655556666665566 566777788888899999999999999995 999999999888887
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.+...+.. .+...+++..++.+++.+...+...++++|..+.++.+...+.+|+.+
T Consensus 300 ~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 356 (437)
T TIGR00792 300 GYLIFFFAG-----------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVY 356 (437)
T ss_pred HHHHHHHcc-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHH
Confidence 776655421 134556667778889999888999999999887543222124479999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchh
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWK 219 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~ 219 (595)
++++....+|..+++.+.|++.+..||.
T Consensus 357 ~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 357 SVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999998776663
No 172
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.04 E-value=5e-09 Score=109.97 Aligned_cols=153 Identities=13% Similarity=0.074 Sum_probs=115.2
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
..+.......+....++.+..+++.|+++ .|++..+.+.+.+...++..++.+++|+++||+-+||+++.++.++.+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 276 (355)
T TIGR00896 198 LAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVG 276 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Confidence 34444445556667778888899999875 79999999999999999999999999999999414566777777777777
Q ss_pred HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHH
Q 007637 113 TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFN 192 (595)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (595)
...+.+.. +.... ...++.|++.|...|...+.+.+..+++ +.++...+
T Consensus 277 ~~~~~~~~------------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~------~~~g~~~~ 325 (355)
T TIGR00896 277 LCGLLFAP------------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQA------AQAAALSA 325 (355)
T ss_pred HHHHHHhh------------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCH------HHHHHHHH
Confidence 66555432 11111 2346789999998888777776655542 33688888
Q ss_pred HHHHHHhhhhHHHHHHHHHhhcccc
Q 007637 193 WYYASTSVSGMLAFTIIVYIQDHLG 217 (595)
Q Consensus 193 ~~~~~~~~g~~~~p~~~~~l~~~~g 217 (595)
+.+...+++..++|.+.|++.++.|
T Consensus 326 ~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 326 MAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888999999999999998775
No 173
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.03 E-value=4.4e-09 Score=113.06 Aligned_cols=164 Identities=12% Similarity=-0.041 Sum_probs=112.8
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhh-hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH-HHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMN-GYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWV-ILLGSFSSL 110 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-~~~~~~~~~ 110 (595)
..+......++....++++.+++|.|+.+ ..|.+..+++.......++..++.+++|+++||+ +||+. +....+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 34455566777778888999999999977 3578888999999999999999999999999995 87774 333333333
Q ss_pred HHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhH
Q 007637 111 LGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETF 190 (595)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (595)
++..+..... +....+++..+.++|.....+.......+.+|+ +.|+++
T Consensus 322 ~~~~~~~~~~------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~a 370 (412)
T TIGR02332 322 AGWLLASATD------------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISL-------QARAIA 370 (412)
T ss_pred HHHHHHHhcC------------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccch-------HHHHHH
Confidence 3322211110 111112222233333322233333444566666 559999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHhhcccc-hhHHHHHHHHH
Q 007637 191 FNWYYASTSVSGMLAFTIIVYIQDHLG-WKIGFGVRAIL 228 (595)
Q Consensus 191 ~~~~~~~~~~g~~~~p~~~~~l~~~~g-~~~~f~~~~~~ 228 (595)
+++.+...++|+.++|.+.|.+.+..| |+..|++.+++
T Consensus 371 ~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 371 IAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999999998774 99998876654
No 174
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.03 E-value=1e-08 Score=109.23 Aligned_cols=175 Identities=16% Similarity=0.069 Sum_probs=122.3
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHH-HHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSS-ISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
++......++...+.....++.+.|+.+ .|+++++.+++...... ...++.+++|++.||+ |+||++..+.++.++.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 4444445556666666677788888875 79999999999888765 5667789999999995 9999998877655333
Q ss_pred HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHH
Q 007637 113 TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFN 192 (595)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (595)
........ .... ..+...++...++.+++.|...+...+...+..++++ .+++.++
T Consensus 288 ~~~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~g~~~~ 343 (390)
T TIGR02718 288 ALLWFAQA-AFWL-----------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD------QAGTDVT 343 (390)
T ss_pred HHHHHHHH-Hccc-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc------chHHHHH
Confidence 32222111 0000 0122333444455566667666777777666665522 2799999
Q ss_pred HHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 007637 193 WYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTL 234 (595)
Q Consensus 193 ~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 234 (595)
+.+...++|..++|.++|++.+..||+..|++.+++.+++.+
T Consensus 344 ~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 344 AVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887766555443
No 175
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.02 E-value=6.7e-09 Score=113.81 Aligned_cols=172 Identities=11% Similarity=0.103 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhH-------HHHHHHH
Q 007637 35 PFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFW-------VILLGSF 107 (595)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-------~~~~~~~ 107 (595)
+...+..++.....+.+..+++.|+.+++|++..+++.+.+++.++..++.+++|+++||+ |||+ .+.+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~ 333 (476)
T PLN00028 255 WILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQT 333 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHH
Confidence 3333333344444455667889999988999999999999999999999999999999995 8762 2222222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
+..+...++.... +.....+..++.+++.+...+...++..+..| +.|
T Consensus 334 l~~i~~~~~~~~~------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------~~~ 381 (476)
T PLN00028 334 LGGVFCIWLGRAN------------------------SLGAAIVVMILFSIFVQAACGATFGIVPFVSR--------RSL 381 (476)
T ss_pred HHHHHHHHhcccc------------------------hHHHHHHHHHHHHHHHHHhhhhhcccCcccCh--------hhc
Confidence 2222222221111 23333444445555544444444455554433 237
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhC
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGS 240 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 240 (595)
++..++.+...++|+.++|.+.+ ..+..+|+..|++.+++.+++.++.++.+
T Consensus 382 g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 382 GVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 88899887777777777776543 22345799999998877777766665544
No 176
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.00 E-value=6e-09 Score=112.52 Aligned_cols=164 Identities=18% Similarity=0.172 Sum_probs=134.6
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|.....++..++..+++....+..+.|.+..+|.+ ...+.+..+..+...++.+++++++||+ |+||++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 44555666777778888877888888888888877 5667778889999999999999999995 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.+...+.. ..+.+.+++..++.|++.|...+...++++|..+.++...+++..|..+
T Consensus 303 ~~~~~~~~~----------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~ 360 (428)
T PF13347_consen 303 GFLLLFFLG----------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYF 360 (428)
T ss_pred HHHHHHHHH----------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHH
Confidence 888777653 1267888899999999999999999999999998765433334468889
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchh
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWK 219 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~ 219 (595)
+.......++..+++.+.+.+.+..|+.
T Consensus 361 s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 361 SVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 9999999999999999999887655443
No 177
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.00 E-value=2.8e-08 Score=106.43 Aligned_cols=173 Identities=9% Similarity=-0.082 Sum_probs=123.5
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGT 113 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~ 113 (595)
++.......+.....+......+.|+.+++|+++.+.++......++..++.++.|+++||+ |+|+.+.++.++..++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 34433444444455555566678888888999999999888888888899999999999995 99999999888777777
Q ss_pred HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH
Q 007637 114 TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193 (595)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (595)
.+..+..... ..+...++++.++.|+|.+...+...+..... +++ .|++..+.
T Consensus 296 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~-------~~g~~~~~ 348 (406)
T PRK15402 296 LLAALATVIS-------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDV-------SKGTVSAA 348 (406)
T ss_pred HHHHHHHHcc-------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccc-------cccHHHHH
Confidence 6665432110 11345567778888999888777665554332 222 27899999
Q ss_pred HHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 007637 194 YYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTL 234 (595)
Q Consensus 194 ~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~ 234 (595)
++....+|..+|+.+.+++.+..++....+...+..++.++
T Consensus 349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK15402 349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLL 389 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHH
Confidence 99888999999999999998877766655554444443333
No 178
>TIGR00895 2A0115 benzoate transport.
Probab=99.00 E-value=3.8e-09 Score=111.74 Aligned_cols=146 Identities=16% Similarity=0.043 Sum_probs=111.5
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGT 113 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~ 113 (595)
.+......++....++....+++ ++.+++|.+..+.+.+.+...++..++.+++|+++||+ |||+.+....+.....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~- 328 (398)
T TIGR00895 252 TVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFA- 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHH-
Confidence 33344455566666677777777 66678999999999999999999999999999999995 9995554443333332
Q ss_pred HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH
Q 007637 114 TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193 (595)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (595)
.++.... .+...+++..++.|++.+...+...++..|.+|+ +.|++++++
T Consensus 329 ~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~ 378 (398)
T TIGR00895 329 VLVGSTL-----------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPT-------AIRATGVGW 378 (398)
T ss_pred HHHHHHh-----------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH-------HHHHHHHHH
Confidence 2222211 1345566777888999998899999999999998 558999999
Q ss_pred HHHHHhhhhHHHHHHHHHh
Q 007637 194 YYASTSVSGMLAFTIIVYI 212 (595)
Q Consensus 194 ~~~~~~~g~~~~p~~~~~l 212 (595)
.+....+|..++|.++|++
T Consensus 379 ~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 379 AIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999875
No 179
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.99 E-value=2.3e-08 Score=109.34 Aligned_cols=158 Identities=11% Similarity=0.071 Sum_probs=110.8
Q ss_pred HHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccC
Q 007637 57 FYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSS 136 (595)
Q Consensus 57 ~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (595)
+++.++.|.+..+..+......+...++.+++|+++||+ |||++++.+.++.+++.+.+......+.
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~~------------ 361 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQA------------ 361 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcCc------------
Confidence 334457899887777777788888999999999999995 9999999999988888776654320000
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccC-CccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHH----
Q 007637 137 NCSSATPAQFAILLSSFALISIGAGC-VRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVY---- 211 (595)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~l~g~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~---- 211 (595)
.........++.+++.+. ..|...+++.|.+|+ +.|++++++.+...++|..+++.+.+.
T Consensus 362 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~ 426 (479)
T PRK10077 362 --------PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPN-------AIRGKALAIAVAAQWIANYFVSWTFPMMDKN 426 (479)
T ss_pred --------ccHHHHHHHHHHHHHHhccccchhHHHhHhhCCh-------hHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 111222233334444433 346778999999988 558999999998888888887655554
Q ss_pred --hhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 212 --IQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 212 --l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
+.+..+|+..|++.++..+++.+..++..++
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 459 (479)
T PRK10077 427 SWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPE 459 (479)
T ss_pred cchhhhccCccHHHHHHHHHHHHHHHHHhcccc
Confidence 4457788888888776666555554444443
No 180
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.98 E-value=6.7e-09 Score=113.64 Aligned_cols=157 Identities=13% Similarity=0.080 Sum_probs=125.8
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|..+......++..+.+++...+++.|+++.+|.++.++++......++..++.+++|++.||+ |||+++.++.++.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 4445555666677777888888999999999999999999999999999999999999999995 999999999888887
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+..++.+.. .+ ..+...+....++.|+|.|...+.......+.+|+ +.|+++.
T Consensus 334 ~~~~~~~~~-~~-------------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-------~~~g~~~ 386 (485)
T TIGR00711 334 GFYWRAFTF-TP-------------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPP-------HKIARGS 386 (485)
T ss_pred HHHHHhccC-CC-------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-------HHHhHHH
Confidence 776655221 01 11345556667788999988877777777777777 5589999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhccc
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHL 216 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~ 216 (595)
++++...++|+.+|+.+.+.+.++.
T Consensus 387 ~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 387 SLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999877643
No 181
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.98 E-value=2.2e-08 Score=109.23 Aligned_cols=177 Identities=15% Similarity=0.041 Sum_probs=119.1
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH--------HH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWV--------IL 103 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~--------~~ 103 (595)
+.++......++....++.+..++|.|+.+.+|++..+.++..++..++..++.+++|+++||+ ++|+. +.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHH
Confidence 4567777778888888888999999999999999999999999999999999999999999995 65432 11
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcch
Q 007637 104 LGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKN 183 (595)
Q Consensus 104 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (595)
.+......+..++.... .. .+....++...+.+.+.+...+.......|..|
T Consensus 340 ~~~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------- 391 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPY-LS--------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAP------- 391 (465)
T ss_pred HHHHHHHHHHHHHHHHH-cC--------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-------
Confidence 11111111111111110 00 022333334444444444444444444334333
Q ss_pred hhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHHh
Q 007637 184 KRVLETFFNWYYASTSVSGMLAFTIIVYIQDH---LGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 184 ~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~---~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
+.++...++.+...++|+.++|.+.|++.+. .+|...|.+.++..+++.+...+
T Consensus 392 -~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 392 -RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 3489999999999999999999999988764 34888998887777666655443
No 182
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.98 E-value=1.9e-08 Score=106.91 Aligned_cols=165 Identities=9% Similarity=-0.003 Sum_probs=111.8
Q ss_pred HHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhc
Q 007637 41 ESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTA 120 (595)
Q Consensus 41 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~ 120 (595)
.++.....+....++++|+.+.+|+++.+.+.+.+...++..++.++.|+++||+ |+|+.+..+..+.+++.++.....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~~~~~~~ 286 (382)
T PRK10091 208 TMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALLMLFFFG 286 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444556677888888999999999999999999999999999999995 999999988887777765543321
Q ss_pred ccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhh
Q 007637 121 MIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSV 200 (595)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 200 (595)
.+.....+..++.+++.+...+.......+..+++ +.++.+ ..+...++
T Consensus 287 -----------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~ 335 (382)
T PRK10091 287 -----------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGG------ELLGAA--GGQIAFNL 335 (382)
T ss_pred -----------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcc------hHHHHH--HHHHHHHH
Confidence 02233444445555555444443333333332221 223433 33556789
Q ss_pred hhHHHHHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHH
Q 007637 201 SGMLAFTIIVYIQDH-LGWKIGFGVRAILMVLSTLMFL 237 (595)
Q Consensus 201 g~~~~p~~~~~l~~~-~g~~~~f~~~~~~~~~~~~~~~ 237 (595)
|..+||.++|++.+. .+|+..+.+.++..++......
T Consensus 336 g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 336 GSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 999999999998885 6899999888766655544433
No 183
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.97 E-value=1.1e-07 Score=100.65 Aligned_cols=118 Identities=15% Similarity=0.145 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchh
Q 007637 414 KMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMS 493 (595)
Q Consensus 414 ~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~r 493 (595)
.+.+..|+.+.++-++.+.+.+ ++|.+++.-++.|+-.++++.+.-+|+...+|+++|
T Consensus 436 v~v~~lgLa~~~~Rf~~~S~L~----------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~ 493 (618)
T KOG3762|consen 436 VNVMYLGLACNVGRFLYYSYLQ----------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLR 493 (618)
T ss_pred cceeeehhhHHHHHHHHHHHhc----------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcch
Confidence 3578889999999999998877 888899999999999999999999999999999999
Q ss_pred hHHHHHHHHH-HHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 007637 494 SMAMAIFTLG-MAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPSV 569 (595)
Q Consensus 494 g~~~gl~~~~-~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~~~~ 569 (595)
.+++|+.... .++|-.+|+.++|.+..... ....|..+++.+++.++++..+.+..+++.
T Consensus 494 at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg----------------~~ttf~~~giAcl~~l~~~~~iq~~l~~~~ 554 (618)
T KOG3762|consen 494 ATAQGLLQGIFHGLGKGLGSLIGGFVVERFG----------------ARTTFRIFGIACLVTLALFISIQLLLKRRG 554 (618)
T ss_pred HHHHHHHHHHhcccCcchhhhhhhhhheeeh----------------hHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Confidence 9999998655 67888888888887775431 356789999999998888888876665543
No 184
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.96 E-value=2.8e-08 Score=106.33 Aligned_cols=155 Identities=13% Similarity=0.169 Sum_probs=104.1
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHH-HHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 007637 53 PNMIFYLMNGYHVEAANGASMLSIWS-SISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCN 131 (595)
Q Consensus 53 ~~l~~yl~~~l~~s~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 131 (595)
.+.+.|+.+++|+++.+.+++..... ++..++.+++|++.||+ |||+.+.++.+...+..+.+......+.
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~~------- 301 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTPK------- 301 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcCC-------
Confidence 44556777789999999999886654 46888999999999995 9999888777666555443322110111
Q ss_pred ccccCCCCCCCchhHHHHHHHH----HHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHH
Q 007637 132 QLVSSNCSSATPAQFAILLSSF----ALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFT 207 (595)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~----~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~ 207 (595)
+.+.+++.. +..+++.+...+....++.+.+|. +.++++....+++..++..
T Consensus 302 -------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~~~ 357 (402)
T PRK11902 302 -------------HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSA-----------TQYALLSALASVGRVYVGP 357 (402)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH-----------HHHHHHHHHHHHHHHHHHH
Confidence 233344333 334555666666667777766665 2234444455677766666
Q ss_pred HHHHhhcccchhHHHHHHHHHHHHHHHHHHhh
Q 007637 208 IIVYIQDHLGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 208 ~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
++|++.+++||+..|.+.+++.+++.+..+..
T Consensus 358 ~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 358 TSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998887776665554433
No 185
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.95 E-value=2.6e-08 Score=109.58 Aligned_cols=172 Identities=13% Similarity=0.088 Sum_probs=140.9
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGT 113 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~ 113 (595)
+..++...++..+....+...+|.+..+.+|.++...|++.+++.++..++.++.+++.+|+ ++++++..+.+..+++.
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALAL 298 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHH
Confidence 33334444444454455566788888899999999999999999999999999999999995 99999999988888887
Q ss_pred HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH
Q 007637 114 TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193 (595)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (595)
+.++++. +.+..++..++.|++.........+.+-...|+ ++||+.+++
T Consensus 299 ~~lal~~------------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~-------~~~GRv~si 347 (524)
T PF05977_consen 299 LLLALSP------------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPD-------WVRGRVFSI 347 (524)
T ss_pred HHHhcch------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHhHHHHH
Confidence 7777654 567777888888999888888888888888888 679999999
Q ss_pred HHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Q 007637 194 YYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFL 237 (595)
Q Consensus 194 ~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 237 (595)
++.....+..+|.++.|.+.+++|-+..+.++++..+++.++.+
T Consensus 348 ~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 348 YQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99998999999999999999999999998887776655555543
No 186
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.95 E-value=1.4e-08 Score=107.26 Aligned_cols=158 Identities=10% Similarity=0.196 Sum_probs=111.3
Q ss_pred HHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Q 007637 38 IVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLW 117 (595)
Q Consensus 38 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~ 117 (595)
.+...+....++....+.+.|+.+++|.++.+.+.+.+...++..++.+++|++.||+ |||+.+..+..+..++..++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 290 (385)
T TIGR00710 212 ALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAVLLE 290 (385)
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH
Confidence 3334444455566667778888889999999999999999999999999999999995 999999888877777766555
Q ss_pred HhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHH
Q 007637 118 STAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAS 197 (595)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (595)
.....+. .....+++..++.|++.+...+.......|..|+ + |+++.++.+..
T Consensus 291 ~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-------~g~~~~~~~~~ 343 (385)
T TIGR00710 291 ITAILGL-------------------GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-V-------AGTASALFGTL 343 (385)
T ss_pred HHHHhcc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-c-------chHHHHHHHHH
Confidence 4321100 1234455566678888888888888887777653 2 68888887766
Q ss_pred Hhh-hhHHHHHHHHHhhcccchhHHHHH
Q 007637 198 TSV-SGMLAFTIIVYIQDHLGWKIGFGV 224 (595)
Q Consensus 198 ~~~-g~~~~p~~~~~l~~~~g~~~~f~~ 224 (595)
... |...+| +.+.+.+..+|...+..
T Consensus 344 ~~~~g~i~~~-~~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 344 RLVLGAIVGY-LVSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHH-HHHhccccChHHHHHHH
Confidence 654 555555 45555555455544443
No 187
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.93 E-value=1.7e-08 Score=111.22 Aligned_cols=154 Identities=14% Similarity=-0.027 Sum_probs=125.2
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|.........++...++++...+++.|+++.+|+++.+++.......++..++.+++|++.||+ |||+++..+.++.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4445555666667777788888899999999999999999999999999999999999999995 999999988888877
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+..++.... . ..+.+..++..++.|+|.|...+.......+..|+ +.++.+.
T Consensus 338 ~~~~l~~~~-~--------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~-------~~~g~~~ 389 (495)
T PRK14995 338 SFYGLAMTD-F--------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPP-------EKAAAAG 389 (495)
T ss_pred HHHHHHHhc-C--------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCH-------HhcchHH
Confidence 776654422 0 11334456677888999999888888888888887 4478999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhc
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQD 214 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~ 214 (595)
++++...++|+.+|+.+.+.+.+
T Consensus 390 ~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 390 AIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888764
No 188
>PRK10054 putative transporter; Provisional
Probab=98.92 E-value=1.5e-08 Score=108.24 Aligned_cols=173 Identities=12% Similarity=0.040 Sum_probs=124.7
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhh--hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMN--GYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSL 110 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 110 (595)
..+......++..+.+..+..+.+.|+.. +.+.+....+.+.....+.....+++.|++.||+ ++|+.+..+.++..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHH
Confidence 34444444555555555555566666643 3456666777888888777777888999999996 99999999988777
Q ss_pred HHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhH
Q 007637 111 LGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETF 190 (595)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (595)
++.....+.. .+.+.+.++.++.++|.+...|...+++.+..|++. |++.
T Consensus 286 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~-------~~~~ 335 (395)
T PRK10054 286 IGLVGFIFSG-----------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM-------KASY 335 (395)
T ss_pred HHHHHHHHcc-----------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc-------ceeh
Confidence 7776655421 145556677888999998888888888988888733 6777
Q ss_pred HHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Q 007637 191 FNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFL 237 (595)
Q Consensus 191 ~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 237 (595)
++... ...+|..+||.++|++.++.|....|++.++...++.+...
T Consensus 336 ~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 336 FSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 77543 55689999999999999999988888776555444444433
No 189
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.92 E-value=2.4e-08 Score=110.24 Aligned_cols=173 Identities=16% Similarity=0.038 Sum_probs=108.9
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHH------------HHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGAS------------MLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF 107 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~------------~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 107 (595)
..++..+.+|++..+.|.+++ +.|++..+++. ...+..++..++.+++++++||+ |||++++++..
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~ 373 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHH
Confidence 344455677888777777775 57876543221 12233345556778899999995 99999988887
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
+.+++..++.+... .. .+...+....+...++..+..+....+.+|.+|. +.|
T Consensus 374 ~~~~~~~~l~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~-------~~R 426 (502)
T TIGR00887 374 ILTVLFFVLGFAYN-HL-------------------STHGFLAIYVLAQFFANFGPNATTFIVPGEVFPT-------RYR 426 (502)
T ss_pred HHHHHHHHHHHHHH-hc-------------------chhHHHHHHHHHHHHHhcCCCchhhhhhhccCch-------hHH
Confidence 77766655543220 00 0111111111112222223345667778999999 669
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcc----------cchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDH----------LGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~----------~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
+++.++.+....+|+.++|.+.+++.+. .++...|++.++..+++.+.. +..|+
T Consensus 427 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpE 490 (502)
T TIGR00887 427 STAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPE 490 (502)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEecc
Confidence 9999999999999999999999998773 344556666665555554433 33344
No 190
>PRK10133 L-fucose transporter; Provisional
Probab=98.91 E-value=4.4e-08 Score=106.12 Aligned_cols=162 Identities=12% Similarity=0.060 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHh-hhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 007637 36 FIIVNESFEKVASYGLLPNMIFYL-MNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTT 114 (595)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~l~~yl-~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~ 114 (595)
...+..++.....++...+++.|+ ++.+|+++.+++.....+.++..++.+++|++.||+ ||||++..+.++.+++..
T Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~ 340 (438)
T PRK10133 262 WAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCL 340 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHH
Confidence 333444555566666667888886 567899999999999999999999999999999995 999999888777665554
Q ss_pred HHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHH
Q 007637 115 TLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWY 194 (595)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 194 (595)
+..+.. +. ..+...++.|++.+..+|...+...+.++++. +.+.++.
T Consensus 341 ~~~~~~------------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~--------~~as~l~ 387 (438)
T PRK10133 341 ISAFAG------------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT--------KYGSSFI 387 (438)
T ss_pred HHHHcC------------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh--------ccchhHH
Confidence 443322 11 12455677899999999999999998887632 3344443
Q ss_pred HHHHhhhhHHHHHHHHHhhcccc-hhHHHHHHHHHHHHH
Q 007637 195 YASTSVSGMLAFTIIVYIQDHLG-WKIGFGVRAILMVLS 232 (595)
Q Consensus 195 ~~~~~~g~~~~p~~~~~l~~~~g-~~~~f~~~~~~~~~~ 232 (595)
. ...+|+.++|.+.|++.+..| -+..|++..+..+..
T Consensus 388 ~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 388 V-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred h-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 3 234678888889999999887 788887666554433
No 191
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.90 E-value=6e-07 Score=91.92 Aligned_cols=156 Identities=19% Similarity=0.160 Sum_probs=109.5
Q ss_pred hhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCC
Q 007637 59 LMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNC 138 (595)
Q Consensus 59 l~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (595)
+.+++|++..|.+.+.......+.+..++.|.++||+ ||||.-+...+++.++++.--.
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~-------------------- 118 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS-------------------- 118 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc--------------------
Confidence 3467999999999999999999999999999999996 9999999888888887754321
Q ss_pred CCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHH-HHHhhhhHHHHHHHHHhhcccc
Q 007637 139 SSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYY-ASTSVSGMLAFTIIVYIQDHLG 217 (595)
Q Consensus 139 ~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~~p~~~~~l~~~~g 217 (595)
.++..++++|++.|++......+.-+.......+++-++ +..+..++... ..+.+-.+.+.+++-++.+..+
T Consensus 119 -----~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~--~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~ 191 (354)
T PF05631_consen 119 -----SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQ--EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG 191 (354)
T ss_pred -----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC
Confidence 267889999999999999988877776654433222111 22344444332 2233334444445556666554
Q ss_pred --hhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 218 --WKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 218 --~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
...+|..+.++..++.++.....++
T Consensus 192 ~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 192 FGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred CCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 4789988887777666665554444
No 192
>PRK09848 glucuronide transporter; Provisional
Probab=98.90 E-value=1.6e-08 Score=109.89 Aligned_cols=164 Identities=13% Similarity=0.161 Sum_probs=123.3
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|.+.......++...+++......+.|+++.+|.++...++......++..++.++.++++||+ |+|+++.++.++.++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 3444455556666666666666777788888998776666555555667888999999999995 999999999988888
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.+.+.+.. ..+.+.+++..++.++|.+...+...++.+|..|.++...+++.+|..+
T Consensus 307 ~~~~~~~~~----------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~ 364 (448)
T PRK09848 307 GYLLFFWVS----------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTY 364 (448)
T ss_pred HHHHHHHcC----------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHH
Confidence 876665422 1145566677788899999999999999999888754322224468889
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccch
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGW 218 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~ 218 (595)
+.+.+...+|..+++.+.+.+.+..||
T Consensus 365 ~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 365 SLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999887665554
No 193
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.89 E-value=8.4e-08 Score=103.32 Aligned_cols=187 Identities=12% Similarity=0.071 Sum_probs=124.2
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
..|...+..++.--+|.++..++|.|+++.++ .........+..+...+..+++|+++||+ |++|++.++.+...++
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIF 329 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHH
Confidence 35555555555444555566688999887663 33333334456678889999999999995 9999999998877776
Q ss_pred HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCC-------------
Q 007637 113 TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKD------------- 179 (595)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------------- 179 (595)
........ |. ....+...+.+..+.+.++.|.-.++...++.+.+|+++
T Consensus 330 ~~~~~l~l--p~----------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~ 391 (462)
T PRK15034 330 SALLFLTL--PG----------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQ 391 (462)
T ss_pred HHHHHHHh--cc----------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhH
Confidence 64433221 11 011245666666666666667766777778878777410
Q ss_pred C-cchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhccc-chhHHHHHHHHHHHHHHHHHHhhC
Q 007637 180 N-PKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHL-GWKIGFGVRAILMVLSTLMFLFGS 240 (595)
Q Consensus 180 ~-~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~ 240 (595)
+ .+..++-+...|+......+|+.+.|.+.|...+.. ++...|+...+..++|.++-+.+.
T Consensus 392 ~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 392 AQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 000123577788888888899999998888776654 488888887777777777665544
No 194
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.89 E-value=2.5e-08 Score=103.32 Aligned_cols=175 Identities=14% Similarity=0.159 Sum_probs=142.0
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+.+.+..+..++.+=+--.+.+....|-.+++|++..+...+.....+..+++++++|++.||+ |-|+++++++++..+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 3555556666666666667778888999999999999999999999999999999999999995 999999999998887
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
.++...+.. ....+++.-++.|...|...+.+-++.++..|+++. +..|
T Consensus 331 ~~~~~~~~~------------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~-------~~fF 379 (438)
T COG2270 331 AALYLIFLE------------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKE-------GRFF 379 (438)
T ss_pred HHHHHHHcc------------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccc-------ccee
Confidence 776655432 245566777888999999999999999999999664 8899
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHHHh
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLG-WKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~ 238 (595)
|+|....-.+..+||.+.+.+.+..| -|..+....++..++++.++.
T Consensus 380 glyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 380 GLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred ehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEe
Confidence 99999999999999999999887654 677776655555555555433
No 195
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.89 E-value=3.4e-08 Score=119.87 Aligned_cols=163 Identities=15% Similarity=0.042 Sum_probs=126.2
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchh-hHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAA-NGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~-~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
++..++..++.....+.+..+++.|+.+.+|++.. +.+++.+...++..++.+++|+++||+ ++++++.++.++.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~ 312 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALS 312 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHH
Confidence 34444444444455566677889999999999999 999999999999999999999999995 9999998888877777
Q ss_pred HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHH
Q 007637 113 TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFN 192 (595)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (595)
.+++.+.. +...+++..++.|++.++..+...+++.+..|+ +.|+++++
T Consensus 313 ~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~rg~~~~ 361 (1146)
T PRK08633 313 LFLLPTAP------------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPE-------KELGKVLA 361 (1146)
T ss_pred HHHHHHhh------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCc-------cchhhhhH
Confidence 66665433 456677778888999998888889999998888 44899999
Q ss_pred HHHHHHhhhhHHHHHHHHHhhcc-cchhHHHHHHHHH
Q 007637 193 WYYASTSVSGMLAFTIIVYIQDH-LGWKIGFGVRAIL 228 (595)
Q Consensus 193 ~~~~~~~~g~~~~p~~~~~l~~~-~g~~~~f~~~~~~ 228 (595)
+.+...++|.++++.+++.+... +++...|++.+++
T Consensus 362 ~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 362 ANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99988889988888777666442 3455555554443
No 196
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.88 E-value=1.1e-07 Score=101.49 Aligned_cols=166 Identities=10% Similarity=-0.013 Sum_probs=115.9
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGT 113 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~ 113 (595)
++......++...+.++...++++++.+++|++..+.+.+...+.++..++.++.|++.||. +|+..+....+....+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~~~~~~~~~~~ 296 (394)
T PRK10213 218 VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAGAPLVLAVSAL 296 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHH
Confidence 44433344444455555556664555567899999999999999999999999999999994 54443443333233333
Q ss_pred HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH
Q 007637 114 TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193 (595)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (595)
.+..... +.+.+.+..++.|++.+...+...+++.+..|++ +++..+.
T Consensus 297 ~l~~~~~------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 344 (394)
T PRK10213 297 VLTLWGS------------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ--------AEKAGSI 344 (394)
T ss_pred HHHHHhh------------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc--------HHHHHHH
Confidence 3322211 3556667788889999998888888888877642 3455556
Q ss_pred HHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 194 YYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLS 232 (595)
Q Consensus 194 ~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~ 232 (595)
.....++|..+||.++|++.+..|++..+...+++.++.
T Consensus 345 ~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 345 QVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 666778999999999999999999998888876654433
No 197
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.84 E-value=4e-08 Score=107.64 Aligned_cols=166 Identities=15% Similarity=0.081 Sum_probs=118.1
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|.+...++..++...+.+....+.+.|.+..++ +....+.+.++..++..++.++.++++||+ |+|++++++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 445555556666666666666666655544444 455666777777788899999999999995 999999988877666
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.+...+....+ ..+.+.+++..++.+++.+...+...++++|..+..+-+.++|..|..+
T Consensus 309 ~~~~~~~~~~~~-------------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~ 369 (473)
T PRK10429 309 SCGVLLLMGLAA-------------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAY 369 (473)
T ss_pred HHHHHHHHhccC-------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHH
Confidence 665544321001 1245566677778889999988999999999987643222224457788
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccch
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGW 218 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~ 218 (595)
+...+...+|..+++.+.|++.+..||
T Consensus 370 s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 370 SVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888888999999999999988776555
No 198
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.84 E-value=1.8e-07 Score=95.09 Aligned_cols=170 Identities=15% Similarity=0.148 Sum_probs=133.9
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+..|.+.+-.-+.+..+|.+..|+|.++. +.|+|+.++|++.++..+.+....+.+-.+++|.-.+|+.......++.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 44566666677788999999999999977 56999999999999999999999999999999866788888888888888
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
|...+.+.+ . +...+. .+++|+|.|+.+|....++.+..++.+ +-++..
T Consensus 287 G~~G~~~~P---~--------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~------~Aa~LS 335 (395)
T COG2807 287 GLVGLLLAP---G--------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAA------IAAALS 335 (395)
T ss_pred HHHHHHHhh---h--------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChH------HHHHHH
Confidence 888776643 1 223333 478999999999999999998776643 356666
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhccc-chhHHHHHHHHHHHHHH
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHL-GWKIGFGVRAILMVLST 233 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~-g~~~~f~~~~~~~~~~~ 233 (595)
++.+-...+=..+||++.|++-|.. +|..+++..+...++..
T Consensus 336 gmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 336 GMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred HHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 6766666777788999999998865 59888776555444333
No 199
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.83 E-value=6.6e-08 Score=103.50 Aligned_cols=153 Identities=12% Similarity=0.092 Sum_probs=109.5
Q ss_pred chHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 007637 51 LLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPC 130 (595)
Q Consensus 51 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 130 (595)
...++|.|+++..+ ++.+.+++.++..++...+....+++.||..+.++.+..+.++..++..++....
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~---------- 295 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS---------- 295 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh----------
Confidence 34567888876555 6788888888877766655555566665434767777777777777766655433
Q ss_pred CccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHH
Q 007637 131 NQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIV 210 (595)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 210 (595)
+...+.+..++.+++.+...|...+++.+..|+++ |++.+++++...++|..+||.++|
T Consensus 296 --------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~-------~g~~~g~~~~~~~~g~~ig~~l~G 354 (400)
T PRK11646 296 --------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA-------RGSYMGFSRLGLALGGAIGYIGGG 354 (400)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc-------chhhhhHHHHHHHHHHHhcccchH
Confidence 34455566677888888888888999999999844 899999999999999999999999
Q ss_pred Hhhccc---c-hhHHHHHHHHHHHHHHHH
Q 007637 211 YIQDHL---G-WKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 211 ~l~~~~---g-~~~~f~~~~~~~~~~~~~ 235 (595)
++.++. + ...+|...++..+++.+.
T Consensus 355 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 355 WLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 998764 2 345555555544444433
No 200
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.83 E-value=5.3e-08 Score=118.16 Aligned_cols=185 Identities=10% Similarity=-0.052 Sum_probs=129.8
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+.++...+..++..+.++.+.++++.|+.+.+|.++.+.+++.+.+.++..++.++.|+++|+. ++++.+..+.++.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 3455555555666666677778999999999999999999999999999999999999999985 777766666655555
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.+.+.+.. .....++ .+.....+. ....+.+.++++.+++|++.+...+...+++.+..|++ .||+++
T Consensus 304 ~~~~l~~~~-~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~-------~~G~v~ 372 (1140)
T PRK06814 304 FGLDLAFAS-SSVPAEP--AQLKSILVF-LSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPA-------HRARVI 372 (1140)
T ss_pred HHHHHHhcc-ccccccc--ccccchhhh-hcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcc-------cceeee
Confidence 544443320 0000000 000000000 00024456677888889999999989999999999994 489999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhc-ccchhHHHHHHHHH
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQD-HLGWKIGFGVRAIL 228 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~-~~g~~~~f~~~~~~ 228 (595)
+..+...++|..+++++++.+.+ ..++...+++.+++
T Consensus 373 g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 373 AANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999999999999988863 45666666554443
No 201
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.79 E-value=2e-07 Score=98.65 Aligned_cols=167 Identities=10% Similarity=-0.070 Sum_probs=111.5
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchh---HHHHH-HHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRF---WVILL-GSF 107 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr---~~~~~-~~~ 107 (595)
|..+......++....+|++.+|+|.|+.+ .|++.. .+...++..+...++ .++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 456777778888899999999999999965 678764 555555555554444 57888874 543 33232 333
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
+.++......+.. +....++...+.+++.+...+...++.+|.+|+ +.|
T Consensus 266 ~~a~~~~~~~~~~------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~-------~~r 314 (368)
T TIGR00903 266 LIAAFFLALAFEL------------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDK-------ELH 314 (368)
T ss_pred HHHHHHHHHHHcc------------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcch-------hhc
Confidence 3333333333221 122233344455666666667788899999999 558
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Q 007637 188 ETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFL 237 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 237 (595)
+++.++.+...++|+.++|.+.+.+.. |....|.+.++..+++.+..+
T Consensus 315 gt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 315 GKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887774 666677766665555555543
No 202
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.79 E-value=2.9e-07 Score=98.34 Aligned_cols=159 Identities=11% Similarity=-0.084 Sum_probs=115.5
Q ss_pred HHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCC
Q 007637 45 KVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQ 124 (595)
Q Consensus 45 ~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~ 124 (595)
..........++.|+++.+|.++.+.+.+.+...++..++.++.+++.||+ ++++++..+... .+......+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHHh----
Confidence 334444556667888888999999999999999999999999999999995 999888877533 33333333222
Q ss_pred CCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHH
Q 007637 125 LKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGML 204 (595)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 204 (595)
+.+...+..++.|++.+...+...+.+.+..|++. .++++.++.+...+++..+
T Consensus 292 --------------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~------~~g~~~a~~~~~~~~~~~~ 345 (393)
T PRK11195 292 --------------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV------GAGHSIAVQNFNENLAMLL 345 (393)
T ss_pred --------------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc------cchhHHHHHhHHHHHHHHH
Confidence 34555667778899988888878888776543321 2688999999999999999
Q ss_pred HHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 205 AFTIIVYIQDHLGWKIGFGVRAILMVLSTLMF 236 (595)
Q Consensus 205 ~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 236 (595)
+..+.+.+ +..|-+..+.+..+..+++..+.
T Consensus 346 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 346 MLGLYSLL-VKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHH
Confidence 99888855 55676666666555544444443
No 203
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.75 E-value=9.5e-08 Score=100.28 Aligned_cols=145 Identities=11% Similarity=0.087 Sum_probs=109.5
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHH-HHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWS-SISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
.++...+..++..++++...++++.|+.+ +|+++.+.+.+.++.. ++..++.+++|+++||+ |||+.+..+.++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 35555556666788888888999999987 9999999998887766 56789999999999995 999999988887777
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
+.....+...... .++.+..+.+.++.+.++.+++.+...+...++..+.+|+ ++|++.+
T Consensus 288 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~-------~~~g~~~ 347 (356)
T TIGR00901 288 TNAGFVWLASNGH-------------HDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNP-------KFGATQM 347 (356)
T ss_pred HHHHHHHHHhcCc-------------ccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC-------CccHHHH
Confidence 6655443210000 0000112456677778888999999999999999999999 4489999
Q ss_pred HHHHHHHh
Q 007637 192 NWYYASTS 199 (595)
Q Consensus 192 ~~~~~~~~ 199 (595)
++++...+
T Consensus 348 g~~~~~~~ 355 (356)
T TIGR00901 348 ALLSSLSA 355 (356)
T ss_pred HHHHHHHh
Confidence 99876654
No 204
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.74 E-value=3.2e-07 Score=97.88 Aligned_cols=179 Identities=13% Similarity=0.117 Sum_probs=130.4
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGT 113 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~ 113 (595)
+...++..++...+.-....+...|+++.-|.+....+.+.++..+.....-.+.+++-.|+ |.|++++++.+..++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 33344444555555555667888898765448888888888888888989989999999995 99999999999888887
Q ss_pred HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH
Q 007637 114 TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193 (595)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (595)
.+.++..+ |. ...........++.|+..|.+..+...++.+..|+ +.|+++.++
T Consensus 288 ~l~a~~~~-~~------------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~-------~~~at~Q~l 341 (400)
T PF03825_consen 288 LLYAYFSD-PW------------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPP-------ELRATAQGL 341 (400)
T ss_pred HHHHHhcC-Cc------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCc-------cchHHHHHH
Confidence 77776520 10 00112233445678999999999999999999999 448999999
Q ss_pred HHHH-HhhhhHHHHHHHHHhhcccchh------HHHHHHHHHHHHHHHHHHhh
Q 007637 194 YYAS-TSVSGMLAFTIIVYIQDHLGWK------IGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 194 ~~~~-~~~g~~~~p~~~~~l~~~~g~~------~~f~~~~~~~~~~~~~~~~~ 239 (595)
+... ..+|..+|..++|++.+++|-+ ..+.+.++..++..+++++.
T Consensus 342 ~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 342 YSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 8854 5799999999999999987644 44455555444444444443
No 205
>PRK09669 putative symporter YagG; Provisional
Probab=98.73 E-value=1.3e-07 Score=102.62 Aligned_cols=158 Identities=9% Similarity=0.089 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTL 116 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~ 116 (595)
++...++...+........+.|.+..++. +...+.+.....+...++.+++++++||+ |+|+.+.++.+..+++....
T Consensus 234 l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~ 311 (444)
T PRK09669 234 MFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILSALI 311 (444)
T ss_pred HHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHH
Confidence 33344444444433333344444433443 33444556666777888889999999995 99999998877665544333
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
.+.. ..+.+.+++..++.|++.+...+...++++|..+.++...+++..+..++....
T Consensus 312 ~~~~----------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~ 369 (444)
T PRK09669 312 FFIP----------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLF 369 (444)
T ss_pred HHhC----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHH
Confidence 3211 124566777788899999999999999999998864433332445778888888
Q ss_pred HHhhhhHHHHHHHHHhhcccch
Q 007637 197 STSVSGMLAFTIIVYIQDHLGW 218 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~~~~g~ 218 (595)
...+|..+|+.++|++.+..|+
T Consensus 370 ~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 370 AIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999998877666
No 206
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.73 E-value=3.2e-08 Score=102.94 Aligned_cols=141 Identities=17% Similarity=0.237 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCc-hhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVE-AANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTT 115 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s-~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~ 115 (595)
.+...++..+.++....+++.|+.+.+|++ ..+.+.+.++..+...++.++.|+++||+ |+|+...+......++...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 444455555566778889999999999999 89999999999999999999999999995 9988888777776666655
Q ss_pred HHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHH
Q 007637 116 LWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYY 195 (595)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 195 (595)
+.+... ..+....++..++.|++.+...+...+++.+.+|+ +.|++..++.+
T Consensus 290 ~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~ 341 (352)
T PF07690_consen 290 LLLLPF---------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPP-------EYRGTAFGLFN 341 (352)
T ss_dssp HCCSHH---------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHT-------CHHHHHHHHHH
T ss_pred HHHHHH---------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHHHHHHHHH
Confidence 544330 11345566677888999999999999999999988 44899999999
Q ss_pred HHHhhhhHHHH
Q 007637 196 ASTSVSGMLAF 206 (595)
Q Consensus 196 ~~~~~g~~~~p 206 (595)
...++|+.+||
T Consensus 342 ~~~~~~~~igP 352 (352)
T PF07690_consen 342 SIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHCC
Confidence 99999999987
No 207
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.72 E-value=8.3e-08 Score=105.11 Aligned_cols=176 Identities=15% Similarity=0.155 Sum_probs=144.8
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccc--hhHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMG--RFWVILLGSFSS 109 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~~~~~~~~~ 109 (595)
+..+.......+..++++....+++.|.. .++++..+++.++++..+...++.++.|+++|+. . ++.+..++++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 45555566677777888888888888876 8999999999999999999999999999999995 6 344555566666
Q ss_pred HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 110 LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 110 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
.++...+++.. ++..++...++.|+..|.+.......+.|....++ ...
T Consensus 376 gl~~~~~p~~~------------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~-------l~~ 424 (509)
T KOG2504|consen 376 GLARLFLPFAT------------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK-------LSN 424 (509)
T ss_pred HHHHHHHHHhc------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh-------cch
Confidence 66665555544 56788888899999999988888788899998843 789
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHHHhhC
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYIQDHLG-WKIGFGVRAILMVLSTLMFLFGS 240 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 240 (595)
++|+......++.++||.++|++.+..| |...|+++++..+++..++++..
T Consensus 425 a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 425 AYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999999998877 99999999988887776665544
No 208
>TIGR00898 2A0119 cation transport protein.
Probab=98.71 E-value=1.6e-07 Score=103.62 Aligned_cols=142 Identities=11% Similarity=0.016 Sum_probs=100.3
Q ss_pred hhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCC
Q 007637 61 NGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSS 140 (595)
Q Consensus 61 ~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (595)
+.++.+.. .......+....+.+++++++||+ |||+++.++.++.+++.+++.+.. .
T Consensus 351 ~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~---~---------------- 407 (505)
T TIGR00898 351 GNLGGNIY---LDLFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVP---V---------------- 407 (505)
T ss_pred cccCCChH---HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcC---C----------------
Confidence 34455432 333445566778888999999995 999999999888888776665533 1
Q ss_pred CCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhH
Q 007637 141 ATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKI 220 (595)
Q Consensus 141 ~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~ 220 (595)
.......+..++.+++.+...+....+.+|.+|+ +.|++++++.+....+|++++|.+.+ +. ..++..
T Consensus 408 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~ 475 (505)
T TIGR00898 408 ---DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT-------VVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFL 475 (505)
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH-------HHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhh
Confidence 0123334444555666666677888999999999 66899999999999999999999988 43 345667
Q ss_pred HHHHHHHHHHHHHHHHH
Q 007637 221 GFGVRAILMVLSTLMFL 237 (595)
Q Consensus 221 ~f~~~~~~~~~~~~~~~ 237 (595)
++.+.++..+++.+..+
T Consensus 476 ~~~~~~~~~~~~~~~~~ 492 (505)
T TIGR00898 476 PLVLFGGLALLAGILTL 492 (505)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77776666555544443
No 209
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=3.2e-07 Score=98.66 Aligned_cols=190 Identities=12% Similarity=0.018 Sum_probs=129.3
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
+.+...+...++..++-.-........+-++-|++..++.+.+....+...+..+++.++.||. |||+.++++..+..+
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~ 347 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAV 347 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHH
Confidence 3355555566666655544445555556667899999999999999999999999999999995 999999999998888
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHH--HHhccCCccchhhhhcccCCCCCCcchhhhHhh
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALI--SIGAGCVRPCSIAFGADQLDNKDNPKNKRVLET 189 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 189 (595)
..+++.....+.. +. ++.-.+..+++.++. .++.|. .|...-+.+|++|+.. |..
T Consensus 348 ~~~~~~~~~~l~~--------------~~-~~~~~y~~i~~~~~~~~~f~~G~-gpi~~fi~aELf~~~~-------R~a 404 (485)
T KOG0569|consen 348 ALLLMSIALFLSN--------------SF-GSWLSYLCIAAIFLFIISFAIGP-GPIPWFIGAELFPQSA-------RSA 404 (485)
T ss_pred HHHHHHHHHHHHH--------------Hh-hhHHHHHHHHHHHHHHHhhhcCC-CchhHHHHHHhCCccc-------hHH
Confidence 8777655431111 00 000011122333332 333332 5788889999999955 788
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcccccc
Q 007637 190 FFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIKV 246 (595)
Q Consensus 190 ~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 246 (595)
++++......++..+.......+.+..|- ..|.+..+..+++.+..++..|+.+.+
T Consensus 405 a~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 405 AQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 88887777777766666666677776665 555555666666677777777776544
No 210
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1.7e-07 Score=101.46 Aligned_cols=177 Identities=14% Similarity=0.078 Sum_probs=121.0
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccch--------hHHH-
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGR--------FWVI- 102 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--------r~~~- 102 (595)
+.+|.+.+..+++..+++.+..++|.|+.+.+|++..+.|++.++..+.+.+..+++|.++||. -+ ||.+
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l-~~~~ls~t~~rkifn 336 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRL-TFRILSETTVRKIFN 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCchHhHHHHHH
Confidence 3567788899999999999999999999999999999999999999999999999999999995 33 2222
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcc
Q 007637 103 LLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPK 182 (595)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~ 182 (595)
.++....++..+.+++.. |++ .......+.++..+.|+..+++.-+ ..|.. +
T Consensus 337 ~i~~~~~ai~l~~l~~~~---------~~~---------~~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~a-p----- 388 (466)
T KOG2532|consen 337 TIAFGGPAVFLLVLAFTS---------DEH---------RLLAVILLTIAIGLSGFNISGFYKN----HQDIA-P----- 388 (466)
T ss_pred hHHHHHHHHHHHeeeecC---------CCc---------chHHHHHHHHHHHHcccchhhhHhh----hhhcc-c-----
Confidence 122222333333333221 000 0012222223333333333332211 11211 2
Q ss_pred hhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHHhh
Q 007637 183 NKRVLETFFNWYYASTSVSGMLAFTIIVYIQDH---LGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 183 ~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~---~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
++-+..+++.+...++.+.++|.+.+.+... ..|+.+|++.+++.+++.+.+.++
T Consensus 389 --q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 389 --QHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 4468999999999999999999999998842 369999999998888777666554
No 211
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.68 E-value=3.6e-07 Score=96.53 Aligned_cols=143 Identities=11% Similarity=0.096 Sum_probs=90.7
Q ss_pred HHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH
Q 007637 39 VNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWS 118 (595)
Q Consensus 39 ~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~ 118 (595)
....+...+.+....+.+.++.+.+|+++.+.+.+.+...++..++.+++|+++||+ |||+++..+..+..+..+....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~ 279 (377)
T PRK11102 201 LASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGIWLVV 279 (377)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444555556667777888999999999999999999999999999999995 9999999887654443322222
Q ss_pred hcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHH-
Q 007637 119 TAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAS- 197 (595)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~- 197 (595)
....+ .+.+.+.++..+.+.+.+...+.....+.|..|+ . +++..+.....
T Consensus 280 ~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~g~~~~~~~~~~ 331 (377)
T PRK11102 280 SALLD--------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH-M-------AGTASSLAGTLR 331 (377)
T ss_pred HHHHh--------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc-c-------chHHHHHHHHHH
Confidence 11000 1233344444444444455455555556665542 2 57777765543
Q ss_pred HhhhhHHHHHHHH
Q 007637 198 TSVSGMLAFTIIV 210 (595)
Q Consensus 198 ~~~g~~~~p~~~~ 210 (595)
..+|..+++++++
T Consensus 332 ~~~g~~~g~~~~~ 344 (377)
T PRK11102 332 FGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHh
Confidence 3466667765543
No 212
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.65 E-value=4.2e-07 Score=92.12 Aligned_cols=146 Identities=14% Similarity=0.040 Sum_probs=100.4
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhh--cC-----------------CchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNG--YH-----------------VEAANGASMLSIWSSISNFLAIVGAFLA 92 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--l~-----------------~s~~~~~~~~~~~~~~~~~~~~~~G~la 92 (595)
|.-+.+..+.+...++||+..-......+.. .| .+...---=..+.....+-|.++.+++.
T Consensus 326 kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 326 KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHH
Confidence 3344556688888999999765443332211 11 1111111123445566777889999999
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhc
Q 007637 93 DSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGA 172 (595)
Q Consensus 93 Dr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~ 172 (595)
|| +|||+++..+++++.+..+++....+ + ......++.+|+.+..+ +.+.+.+..
T Consensus 406 er-lGRKkTMal~l~~f~iflfll~~c~~-r-------------------n~~tvllf~arafisg~----fqvaYvYtP 460 (528)
T KOG0253|consen 406 ER-LGRKKTMALSLILFGIFLFLLTTCKT-R-------------------NAYTVLLFTARAFISGA----FQVAYVYTP 460 (528)
T ss_pred HH-hcchhHHHHHHHHHHHHHHHHHHhcC-c-------------------chhHHHHHHHHHHHhch----heEEEEecC
Confidence 99 59999999999998888776654320 0 01234566777776544 455688889
Q ss_pred ccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHH
Q 007637 173 DQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTII 209 (595)
Q Consensus 173 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 209 (595)
|.+|. ..|+++.|.-..+.-+|+++.|+++
T Consensus 461 EVyPT-------avRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 461 EVYPT-------AVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred cccch-------hhhhcchhhhhhHHhhhhhhhhHHH
Confidence 99999 6689999998888999999999888
No 213
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.64 E-value=6.3e-07 Score=95.38 Aligned_cols=69 Identities=13% Similarity=0.094 Sum_probs=58.3
Q ss_pred hchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007637 50 GLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWST 119 (595)
Q Consensus 50 ~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~ 119 (595)
....+.+.|+.+++|+++.+.+.+.+...++..++.++.|++.||+ |||+++.++.++..++...+.+.
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345556778888999999999999999999999999999999995 99999999988888777666653
No 214
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.64 E-value=6e-07 Score=96.44 Aligned_cols=162 Identities=11% Similarity=-0.008 Sum_probs=114.2
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhh-cCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNG-YHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
.+......++......+..++++.|+.+. .+.+...++...+.+.....++.+++|+++||+ ++||++.++.+..++.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 34444455555555556667889998653 355556666677778888999999999999995 9999998888877777
Q ss_pred HHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHH
Q 007637 113 TTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFN 192 (595)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 192 (595)
.++..+.. +. ......++.|+..+.++|+..++..+..+++. +.-+
T Consensus 313 ~ll~~~~~------------------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~---------~~~s 358 (410)
T TIGR00885 313 CLGSIFAG------------------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT---------KYGA 358 (410)
T ss_pred HHHHHHcC------------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh---------hhhH
Confidence 76666532 11 22455667778888888999999999888732 2222
Q ss_pred HHHHHHhhhhHHHHHHHHHhhccc------chhHHHHHHHHHHH
Q 007637 193 WYYASTSVSGMLAFTIIVYIQDHL------GWKIGFGVRAILMV 230 (595)
Q Consensus 193 ~~~~~~~~g~~~~p~~~~~l~~~~------g~~~~f~~~~~~~~ 230 (595)
....+..+|+++.|.+.|++.|.. +.+..|++..++.+
T Consensus 359 ~~l~~~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 359 AGLVMAIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HHHHHHHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 222233499999999999999953 57788887655443
No 215
>PRK11043 putative transporter; Provisional
Probab=98.62 E-value=2.6e-06 Score=91.00 Aligned_cols=150 Identities=11% Similarity=0.028 Sum_probs=104.7
Q ss_pred HHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccc
Q 007637 43 FEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMI 122 (595)
Q Consensus 43 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~ 122 (595)
+....++....+.+.|++ ++|+++.+.++......++..++..+++++.||+ |+|+.+..+.+..+++...+......
T Consensus 214 ~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (401)
T PRK11043 214 ACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLL 291 (401)
T ss_pred HHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334445555667777765 5799999999888888888899999999999995 99998766665555544433222100
Q ss_pred CCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhh
Q 007637 123 PQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSG 202 (595)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 202 (595)
. ..+...+++...+.+++.+...|...+...+..|+ + ++++.++++.....++
T Consensus 292 ~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~g~~~g~~~~~~~~~~ 344 (401)
T PRK11043 292 S-------------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A-------TGKAAALQNTLQLGLC 344 (401)
T ss_pred c-------------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c-------ChHHHHHHHHHHHHHH
Confidence 0 01334455566677888888888887777776654 2 6889999888777788
Q ss_pred HHHHHHHHHhhcccchhHH
Q 007637 203 MLAFTIIVYIQDHLGWKIG 221 (595)
Q Consensus 203 ~~~p~~~~~l~~~~g~~~~ 221 (595)
..++.+.+.+.+.......
T Consensus 345 ~~~~~~~g~l~~~~~~~~~ 363 (401)
T PRK11043 345 FLASLLVSALISTPLLTTG 363 (401)
T ss_pred HHHHHHHHHccCCChhHHH
Confidence 8888888888765434433
No 216
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.57 E-value=3.7e-07 Score=97.35 Aligned_cols=158 Identities=16% Similarity=0.125 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 37 IIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTL 116 (595)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~ 116 (595)
..+..++...++....+.+..|.+..+|.++.+....+.....+..++.++..++++|+ |+|+++.++.++.+++.+++
T Consensus 241 ~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~~~~~ 319 (467)
T COG2211 241 LLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVGYLLL 319 (467)
T ss_pred HHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHHHHHH
Confidence 33356666666666677788888888999999998888888888999899999999995 99999999999999999988
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
.+.. .++...+++..++.++|.+...+...++++|..+..+-..++|.-|..++....
T Consensus 320 ~f~~----------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF 377 (467)
T COG2211 320 YFTP----------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTF 377 (467)
T ss_pred Hhhc----------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHH
Confidence 8754 125777888889999999999999999999998875543433445777777777
Q ss_pred HHhhhhHHHHHHHHHhhcccc
Q 007637 197 STSVSGMLAFTIIVYIQDHLG 217 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~~~~g 217 (595)
..-+|..++-.+.|++....|
T Consensus 378 ~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 378 FRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 777888888888887765544
No 217
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.55 E-value=7.6e-06 Score=79.58 Aligned_cols=155 Identities=15% Similarity=0.147 Sum_probs=91.6
Q ss_pred HHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCcccc
Q 007637 56 IFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVS 135 (595)
Q Consensus 56 ~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 135 (595)
..|+.+.+|+...+.+.+..+......++..+.|-++|+ .||||.-..-. +.+.++++..+.
T Consensus 60 vYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtyc----itYiLsCiTKhS------------- 121 (454)
T KOG4332|consen 60 VYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYC----ITYILSCITKHS------------- 121 (454)
T ss_pred eeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-hccccceeeeh----HHHHHHHHhhcC-------------
Confidence 356667789999999988877777788888899999999 59999765444 444444444322
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhc-ccCCCCCCcchhhhHhhHHHHH-HHHHhhhhHHHHHHHHHhh
Q 007637 136 SNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGA-DQLDNKDNPKNKRVLETFFNWY-YASTSVSGMLAFTIIVYIQ 213 (595)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~p~~~~~l~ 213 (595)
+++..+.++|++-|++.+..+.+.-+... |-.+. ...+ ++-...-++-. ...+.+-.+++.+.+-.+.
T Consensus 122 --------pqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnek-r~Fe-qqWls~TFskA~ffgNglvAiiaGlfgn~lv 191 (454)
T KOG4332|consen 122 --------PQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEK-RGFE-QQWLSVTFSKAVFFGNGLVAIIAGLFGNLLV 191 (454)
T ss_pred --------CceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhc-cCCh-HhhhhHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 25677899999999998887776655433 22211 1111 01122222211 1122222233333333444
Q ss_pred cc--cchhHHHHHHHHHHHHHHHHHHh
Q 007637 214 DH--LGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 214 ~~--~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
++ .|...+|-.++.+..++.++.+-
T Consensus 192 d~~slGPVAPFdAAacfLaigmAvil~ 218 (454)
T KOG4332|consen 192 DTFSLGPVAPFDAAACFLAIGMAVILS 218 (454)
T ss_pred HHhccCCCCchHHHHHHHHHHHHHHHh
Confidence 54 46777887666655555555433
No 218
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.52 E-value=0.00014 Score=77.81 Aligned_cols=108 Identities=14% Similarity=0.125 Sum_probs=80.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchh
Q 007637 66 EAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQ 145 (595)
Q Consensus 66 s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (595)
++...-...++.+....+..++++.+.|. +|.|..+.++...+..-.+...+. |
T Consensus 48 ~~~aGy~~~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~~-------------------------N 101 (461)
T KOG3098|consen 48 SAYAGYYGQAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLFP-------------------------N 101 (461)
T ss_pred CCCccHHHHHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHhc-------------------------c
Confidence 33333344788888899999999999999 599999999988776655444331 4
Q ss_pred HHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHH
Q 007637 146 FAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAF 206 (595)
Q Consensus 146 ~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 206 (595)
.+.++..-++.|+|.+..+.....++.+...+++ +++..++.......+-.+|.
T Consensus 102 ~y~~yfssallG~Gaallw~GqG~ylt~~st~~t-------ie~Nisi~Wai~~~~li~Gg 155 (461)
T KOG3098|consen 102 SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRET-------IERNISIFWAIGQSSLIIGG 155 (461)
T ss_pred hHHHHHHHHHhhhhHHheecccceehhhcCChhh-------HHHHHHHHHHHHHHHHHhhh
Confidence 6788899999999999999888888887776633 56666666555555555554
No 219
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.48 E-value=5.4e-06 Score=73.37 Aligned_cols=130 Identities=18% Similarity=0.237 Sum_probs=92.4
Q ss_pred HHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHH
Q 007637 383 IITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWL 462 (595)
Q Consensus 383 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 462 (595)
.+...+..++.+++ .+|.++| +.+..+..+..++........ +.+..
T Consensus 8 ~~~~~~~~~~~g~~----~d~~g~~-------~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~ 54 (141)
T TIGR00880 8 ALGQLIYSPLSGLL----TDRFGRK-------PVLLVGLFIFVLSTAMFALSS----------------------NITVL 54 (141)
T ss_pred hhHHHHHHhhHHHH----Hhhcchh-------HHHHHHHHHHHHHHHHHHHhc----------------------cHHHH
Confidence 33444445544433 5554444 466666666666665554432 55666
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhH
Q 007637 463 IPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDY 542 (595)
Q Consensus 463 ~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~ 542 (595)
....++.+++.....+....+..|..|++.|++++++.+....+|..+++.+.+.+.+.. + +.+
T Consensus 55 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~----------~~~ 118 (141)
T TIGR00880 55 IIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL------G----------WRA 118 (141)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc------c----------hHH
Confidence 777888999999999999999999999999999999999999999999999988876421 2 345
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 007637 543 FYWLLMAMCLVNFGYFLVC 561 (595)
Q Consensus 543 ~f~~~~~~~l~~~v~~~~~ 561 (595)
.|++.++..++..+..+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 119 PFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 6777777776666555543
No 220
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.45 E-value=2.8e-06 Score=89.75 Aligned_cols=179 Identities=10% Similarity=0.084 Sum_probs=136.1
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhc---CCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGY---HVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
|..|...+........|+.+-.-.+.|.+..+ +.++...|.+.++..+..++.-.+..++-+|+ |.|+.++++..+
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i 298 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHH
Confidence 55555444444444445555445677766543 34556678888899999999999999999995 999999999888
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
.++=..++++++ +.+.+.+...+.++-.+.......-++++.+|+ |..+
T Consensus 299 ~~iRi~~~~~~~------------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~-------rlsA 347 (412)
T PF01306_consen 299 MAIRIIGSGFAT------------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDK-------RLSA 347 (412)
T ss_dssp HHHHHHHHHT--------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-G-------GGHH
T ss_pred HHHHHHHHhhhc------------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------hHHH
Confidence 888877777765 678899999999999999889999999999998 5577
Q ss_pred hHHHHH-HHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 189 TFFNWY-YASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 189 ~~~~~~-~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
+.+.+. ..+..+|..+.+.++|++.|+.|++..|++.+.+.++..++..+..++
T Consensus 348 t~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 348 TLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 888875 467789999999999999999999999988777766666665555544
No 221
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.45 E-value=9.1e-08 Score=100.01 Aligned_cols=145 Identities=11% Similarity=0.178 Sum_probs=115.8
Q ss_pred ccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccc
Q 007637 376 GSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVM 455 (595)
Q Consensus 376 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (595)
+.++..-.+...+..|+++++ .+|++|+ +.+.+|..+..++....++..
T Consensus 71 Gll~~vf~v~~~i~sPl~gyL----adryNR~-------~v~~vG~~iW~~Av~~~~fs~-------------------- 119 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYL----ADRYNRK-------RVIAVGIFIWTLAVFASGFSN-------------------- 119 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHH----HhhcCcc-------eEEeeHHHHHHHHHHHHHHHH--------------------
Confidence 455666667777777776665 5665555 688999999999998888765
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCC
Q 007637 456 DMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNL 535 (595)
Q Consensus 456 ~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~ 535 (595)
+.|.+++.-.+.|+||+...|....++++.+|.+.|++++++++++...|..+|..+...+...+. .|
T Consensus 120 --~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-----~W----- 187 (493)
T KOG1330|consen 120 --HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-----WW----- 187 (493)
T ss_pred --HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-----ce-----
Confidence 677778888999999999999999999999999999999999999999999998877666554321 25
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHhhhccccc
Q 007637 536 NKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPS 568 (595)
Q Consensus 536 ~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~~~ 568 (595)
++.|.+.++++++.+++..++.++..++
T Consensus 188 -----r~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 188 -----RWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred -----EEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 5678899999988887777776655443
No 222
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.41 E-value=2.5e-06 Score=89.55 Aligned_cols=140 Identities=11% Similarity=0.143 Sum_probs=99.7
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGT 113 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~ 113 (595)
.+......++.....+.+..+++.|+++.+|+++.+++.+.++..+...++.+++|+++||+ |||+.+..+......+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHH
Confidence 34444444555555667778899999999999999999999999999999999999999995 99998888777666655
Q ss_pred HHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHH
Q 007637 114 TTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNW 193 (595)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 193 (595)
.++.+... + ..+...+++..++.+++.|...+...++..+..|. .+++..++
T Consensus 306 ~~~~~~~~-~-------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~g~~~g~ 357 (366)
T TIGR00886 306 FLVVLGLV-S-------------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR--------ATGAVSGL 357 (366)
T ss_pred HHHHhcCC-C-------------------cchHHHHHHHHHHHHHHhccccchhhhcchhhchh--------hcccHHHH
Confidence 55443220 0 00344444555555666666666677777777753 26889998
Q ss_pred HHHHHhhhh
Q 007637 194 YYASTSVSG 202 (595)
Q Consensus 194 ~~~~~~~g~ 202 (595)
.+...++|+
T Consensus 358 ~~~~~~~g~ 366 (366)
T TIGR00886 358 VGAIGNLGG 366 (366)
T ss_pred HHHhccCCC
Confidence 887777653
No 223
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.35 E-value=2.4e-05 Score=83.23 Aligned_cols=139 Identities=12% Similarity=0.037 Sum_probs=96.5
Q ss_pred hHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 007637 52 LPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCN 131 (595)
Q Consensus 52 ~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 131 (595)
....+.|+.+.+|.++.+.+++.....++..++.++.+++.||+ +++... +.....++.+.........
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~-------- 295 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFG-------- 295 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhc--------
Confidence 44556777888999999999998888888888889999999985 743322 2222222222211110000
Q ss_pred ccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHH
Q 007637 132 QLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVY 211 (595)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 211 (595)
..+.+.+.+..++.+++.+...|...++..|.+|+ . +++..++.+...++|+.+++.++++
T Consensus 296 -----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~-------~g~~~~~~~~~~~lg~~~~~~~~~~ 356 (394)
T PRK11652 296 -----------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L-------AGTAGALLGGLQNIGSGLAALLSAM 356 (394)
T ss_pred -----------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c-------chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01345566777888999999899999988887764 1 5788888888889999999999998
Q ss_pred hhcccchhH
Q 007637 212 IQDHLGWKI 220 (595)
Q Consensus 212 l~~~~g~~~ 220 (595)
+.....+..
T Consensus 357 ~~~~~~~~~ 365 (394)
T PRK11652 357 LPQTGQFSL 365 (394)
T ss_pred ccCCchHHH
Confidence 876644443
No 224
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.34 E-value=9.7e-06 Score=88.85 Aligned_cols=187 Identities=11% Similarity=0.061 Sum_probs=128.0
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhh----HHHHHHHHHHHHHHHHHHHH----HHhhcccchhHH--HH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAAN----GASMLSIWSSISNFLAIVGA----FLADSYMGRFWV--IL 103 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~----~~~~~~~~~~~~~~~~~~~G----~laDr~~Grr~~--~~ 103 (595)
+..++...++....+.-..+.++.|..+..+.+... .+++.++..+...+.+++-. ++.||..+.+.. +.
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 334444555555666566677788877665443222 55677777777666666644 455541122333 36
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcch
Q 007637 104 LGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKN 183 (595)
Q Consensus 104 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (595)
+|+++.+++...+.+..... ++....+.+.+++..++.++|.....|...+++.+..|+
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~---------------~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~------ 412 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFA---------------DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ------ 412 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhc---------------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH------
Confidence 77888877777665432110 011123788899999999999999999999999999999
Q ss_pred hhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 184 KRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 184 ~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
+.|++.++++.....+|..+++.+.....+..+|...|...++..++..+++++..++
T Consensus 413 -~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 413 -RLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6699999999999999999998888877776778888877777666665555554443
No 225
>PRK11462 putative transporter; Provisional
Probab=98.33 E-value=1.6e-05 Score=86.74 Aligned_cols=155 Identities=11% Similarity=0.023 Sum_probs=97.1
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWST 119 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~ 119 (595)
..++..++..........|.+..+|.. ...+.+++++.++..++.+++++++||+ |+|+++..+..+..+...+..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~ 313 (460)
T PRK11462 236 LTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFV 313 (460)
T ss_pred HHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh
Confidence 344444444444444555544445543 3455677888888999999999999995 99998876555444433333322
Q ss_pred cccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHh
Q 007637 120 AMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTS 199 (595)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 199 (595)
. . .+...+++..++.|++.+...+...++++|..+..+-..+++.-+..++.......
T Consensus 314 ~---~-------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~K 371 (460)
T PRK11462 314 P---M-------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLK 371 (460)
T ss_pred c---h-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHH
Confidence 1 0 12223344455667777777777788888887754322211223555677667888
Q ss_pred hhhHHHHHHHHHhhcccch
Q 007637 200 VSGMLAFTIIVYIQDHLGW 218 (595)
Q Consensus 200 ~g~~~~p~~~~~l~~~~g~ 218 (595)
+|..+++.+.|++.+..||
T Consensus 372 lg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 372 LGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9999999888887765454
No 226
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.28 E-value=5.3e-06 Score=85.32 Aligned_cols=119 Identities=19% Similarity=0.148 Sum_probs=101.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCc
Q 007637 411 LSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPK 490 (595)
Q Consensus 411 ~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~ 490 (595)
++.+..+.+|++++..+.+++++.. +++.++++-.+.|+|..+......+++++.+|+
T Consensus 133 iGy~ipm~~Gl~vmf~sTilFafg~----------------------sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~ 190 (464)
T KOG3764|consen 133 IGYKIPMVAGLFVMFLSTILFAFGN----------------------SYPMLFVARSLQGVGSAFADTSGLAMLADVFPE 190 (464)
T ss_pred hccccHHHHHHHHHHHHHHHHHHcc----------------------hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHccc
Confidence 4444689999999999999999876 788999999999999999999999999999997
Q ss_pred ch-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007637 491 SM-SSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGP 567 (595)
Q Consensus 491 ~~-rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~~ 567 (595)
+. ||++||.....-++|..+||.++|.+++..++ ..-|.++++++++...+-+++...++.
T Consensus 191 d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk----------------~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 191 DNERGSVMGIALGFISLGVLVGPPFGGILYEFAGK----------------SAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred chhhhHHHHHHHHHHhccceecCCcccchHhhcCC----------------cCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 65 69999999999999999999999999987643 235999999999888776666544443
No 227
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.27 E-value=1.8e-05 Score=81.86 Aligned_cols=158 Identities=13% Similarity=0.082 Sum_probs=118.8
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|......+..++.--.-..+-++++.|+.+..|++..+++...+.+..+.++|..++-++-.|+ ...|++....+...+
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~il 314 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAIL 314 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 4444445555555444455668899999988999999999999999999999999999999995 888888877765544
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
-++..++.. + ..-+.+.++.|+..+..+|++.+...+.+++++. .-
T Consensus 315 l~~~~~l~~------------------------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts---------~~ 360 (422)
T COG0738 315 LLLAVALIG------------------------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS---------VG 360 (422)
T ss_pred HHHHHHHhc------------------------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc---------cc
Confidence 444444433 2 2233455677888999999999999999996543 22
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHH
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGV 224 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~ 224 (595)
+..-.+.-+|+++.|.+.|++.|..|-...+..
T Consensus 361 s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~ 393 (422)
T COG0738 361 SGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLI 393 (422)
T ss_pred ceeeeeheecchHHHHHHHHHHHhhhhHHHHHH
Confidence 333345668999999999999999988777763
No 228
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.22 E-value=9.2e-05 Score=73.31 Aligned_cols=145 Identities=13% Similarity=0.102 Sum_probs=100.0
Q ss_pred CchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Q 007637 31 LRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSL 110 (595)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 110 (595)
|-.+...+.++.+... .|.+ ....+.+++++|+|.+|.+.+.....++..++ ++.|.+.|++ |.+.++.+|.+...
T Consensus 2 W~~l~a~~~v~~~~Gt-~Y~F-s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCSGT-TYTF-SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhcCc-ccch-hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHH
Confidence 3334444444444432 2333 34556778999999999999999999999875 7899999996 99999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhH
Q 007637 111 LGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETF 190 (595)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (595)
+|+..+.....-. ......+.+.+...+.+.+.+.+..+......+.||+ + ||++
T Consensus 78 ~GY~~~~l~~~~~-----------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~-------RG~v 132 (250)
T PF06813_consen 78 VGYGLLWLAVSGR-----------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S-------RGTV 132 (250)
T ss_pred HHHHHHHHHHhCc-----------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c-------cCce
Confidence 9998887654111 1112556666666666666555544444555578876 2 6888
Q ss_pred HHHHHHHHhhhhHH
Q 007637 191 FNWYYASTSVSGML 204 (595)
Q Consensus 191 ~~~~~~~~~~g~~~ 204 (595)
.++.-....+++.+
T Consensus 133 vgilk~~~GLSaai 146 (250)
T PF06813_consen 133 VGILKGFFGLSAAI 146 (250)
T ss_pred ehhhhHHHHhHHHH
Confidence 88866666665543
No 229
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.21 E-value=5.3e-05 Score=81.50 Aligned_cols=169 Identities=12% Similarity=0.016 Sum_probs=106.5
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
|.++.......+....++....+.|.++++.+|+++.+.++.......+..++..+.+.+.++. +++|.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 3445445555556666677777788999999999999999988878888888777777766553 454544333333344
Q ss_pred HHHHHHHhcc-cCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhH
Q 007637 112 GTTTLWSTAM-IPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETF 190 (595)
Q Consensus 112 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 190 (595)
+..++..... .+ .+....+++.++.++|.+...|+..+..- .+.+.+ ++++
T Consensus 297 g~~l~~~~~~~~~--------------------~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~------~G~a 348 (413)
T PRK15403 297 GLALLIVGNLLWP--------------------HVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP------KGTV 348 (413)
T ss_pred HHHHHHHHHHHcc--------------------ccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC------CcHH
Confidence 4433322210 01 12333566777888888888888775332 223222 4677
Q ss_pred HHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHH
Q 007637 191 FNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMV 230 (595)
Q Consensus 191 ~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~ 230 (595)
.+++......+..+++.+.+++.++ +-.++|....++..
T Consensus 349 ~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 387 (413)
T PRK15403 349 SASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHH
Confidence 7777767667777888888887665 45666655554443
No 230
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.21 E-value=5.6e-05 Score=75.49 Aligned_cols=147 Identities=20% Similarity=0.227 Sum_probs=109.6
Q ss_pred HHHHHHhhhhcCCch--hhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 007637 53 PNMIFYLMNGYHVEA--ANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPC 130 (595)
Q Consensus 53 ~~l~~yl~~~l~~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 130 (595)
...+.+ ...++.+. ...++..+.+.+...++.++.|+++||+ |||+.+..+.....++..++.+...
T Consensus 23 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------- 91 (338)
T COG0477 23 PALPLL-LSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN--------- 91 (338)
T ss_pred HHHHHH-HHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc---------
Confidence 344444 34455554 4788999999999999999999999996 9998888888765555555555431
Q ss_pred CccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH-HHhhhhHHHHHHH
Q 007637 131 NQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA-STSVSGMLAFTII 209 (595)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~~~p~~~ 209 (595)
.....+++.|++.|++.|...+...+++.|.+|+ . ..|+...+.... ...+|..++|.++
T Consensus 92 -------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (338)
T COG0477 92 -------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A-----TERGLAVGLVTLGAGALGLALGPLLA 152 (338)
T ss_pred -------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h-----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2477888999999999999999999999999887 2 227788887776 5777888888777
Q ss_pred HHhhcc--cchhHHHHHHHHHH
Q 007637 210 VYIQDH--LGWKIGFGVRAILM 229 (595)
Q Consensus 210 ~~l~~~--~g~~~~f~~~~~~~ 229 (595)
+.+... .+|+..|.+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 153 GLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHhcchHHHHHHHHHHH
Confidence 766554 57888666555443
No 231
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.20 E-value=3.2e-05 Score=80.65 Aligned_cols=172 Identities=13% Similarity=0.155 Sum_probs=135.9
Q ss_pred HHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHH
Q 007637 38 IVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLW 117 (595)
Q Consensus 38 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~ 117 (595)
+..-+...++++.--..+=+|--+.+|++..|..-++.....+..++-.+.|++..|..+++++..+|+...++++.+..
T Consensus 214 ~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii 293 (403)
T PF03209_consen 214 FVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALII 293 (403)
T ss_pred HHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 33444455565655566677888889999999999999999999999999999998657999999999998888887776
Q ss_pred HhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHH
Q 007637 118 STAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYAS 197 (595)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 197 (595)
++.. .++.+.+..+.+++|++.|.+.....+..-|...+++ -|..+|.....
T Consensus 294 ~a~~---------------------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~-------aG~~mG~WGaa 345 (403)
T PF03209_consen 294 LAGP---------------------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR-------AGLFMGAWGAA 345 (403)
T ss_pred HHHh---------------------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc-------hhHHHHHHHHH
Confidence 6651 1257889999999999999998888888888887744 58999998888
Q ss_pred HhhhhHHHHHHHHHhhcc----------cchhHHHHHHHHHHHHHHHHHH
Q 007637 198 TSVSGMLAFTIIVYIQDH----------LGWKIGFGVRAILMVLSTLMFL 237 (595)
Q Consensus 198 ~~~g~~~~p~~~~~l~~~----------~g~~~~f~~~~~~~~~~~~~~~ 237 (595)
..++..++-.++|.+.|- .+|..+|.+-++..++++.+..
T Consensus 346 QA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 346 QAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888876542 3577788877777666665543
No 232
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.18 E-value=0.0041 Score=65.68 Aligned_cols=61 Identities=15% Similarity=0.146 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007637 458 SAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIV 518 (595)
Q Consensus 458 s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i 518 (595)
++|.+++..+..|+..+..+...+..+.+..|++.|..++|.....-++|..+++.+.-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6677777778889999999999999999999999999999999999999888887765443
No 233
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.05 E-value=0.0023 Score=67.57 Aligned_cols=156 Identities=12% Similarity=0.066 Sum_probs=96.5
Q ss_pred chHHHHHHhhhh-cCCchhhHH-HHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 007637 51 LLPNMIFYLMNG-YHVEAANGA-SMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPA 128 (595)
Q Consensus 51 ~~~~l~~yl~~~-l~~s~~~~~-~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 128 (595)
..+++..|+.+. .|++..|.. -+.-+..=.+....++...+.|. +|.|++++++.+...+...++.+..
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~-------- 92 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT-------- 92 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC--------
Confidence 346889999987 899998875 33444444455666788999998 5999999999988888887777655
Q ss_pred CCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHH
Q 007637 129 PCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTI 208 (595)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 208 (595)
+...+-+.-+..|++.+. ..+..+++=...|++ + -+|. .+....+.-+|..++.++
T Consensus 93 ----------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~---~--yq~v--ts~~raa~l~g~~~s~~l 148 (412)
T PF01770_consen 93 ----------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKE---H--YQKV--TSYTRAATLVGRFISSLL 148 (412)
T ss_pred ----------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHH---H--HHHH--HHHHHHHHHHHHHHHHHH
Confidence 566677777777777655 233344443333332 2 1223 333333334444444433
Q ss_pred HHHhhc--ccchhHHHHHHHHHHHHHHHHHHhh
Q 007637 209 IVYIQD--HLGWKIGFGVRAILMVLSTLMFLFG 239 (595)
Q Consensus 209 ~~~l~~--~~g~~~~f~~~~~~~~~~~~~~~~~ 239 (595)
+-.+.. ..++...+++......++++..++.
T Consensus 149 gQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 149 GQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 333332 3457777777666555555554443
No 234
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.05 E-value=2.5e-05 Score=85.06 Aligned_cols=165 Identities=13% Similarity=0.122 Sum_probs=103.2
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSY---MGRFWVILLGSFS 108 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~~~~~~ 108 (595)
+.+|...+..++.....|++..+++.|+++..|+|..+++.+...+.++..++.+++|+++||. ..+|..+...+.+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3567777788999999999999999999997789999999999999999999999999999992 1555555554443
Q ss_pred H-HHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhH
Q 007637 109 S-LLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVL 187 (595)
Q Consensus 109 ~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r 187 (595)
. .++...+.... .......+.+....+.+...++......+...... +|
T Consensus 353 ~~~~g~~~l~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~------k~ 402 (495)
T KOG2533|consen 353 YAIIGAISLLAAA------------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT------KA 402 (495)
T ss_pred HHHHHHHHHHhhc------------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH------Hh
Confidence 3 33323333221 11112222222233333333444444454443322 24
Q ss_pred hhHHHHHHHHHhhhh-HHHHHHHHHhhcccchhHHHHHHH
Q 007637 188 ETFFNWYYASTSVSG-MLAFTIIVYIQDHLGWKIGFGVRA 226 (595)
Q Consensus 188 ~~~~~~~~~~~~~g~-~~~p~~~~~l~~~~g~~~~f~~~~ 226 (595)
-+..+....+.+.++ +.+++..+.....++|...|+...
T Consensus 403 ~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 403 LTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred HHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 555555555554444 444444555555678888885443
No 235
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.96 E-value=0.00019 Score=79.22 Aligned_cols=150 Identities=13% Similarity=0.048 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchh
Q 007637 70 GASMLSIWSSISNFLAIVG----AFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQ 145 (595)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~----G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (595)
.+++.++..+...++.++. +++.||. +..+.+.+|+++.+++++.+++...... ..+.-+
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l~~l~f~~l~~~~~~~~---------------~~~~vs 381 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVLCSGAFLVLPLGAKFAN---------------DAGIVS 381 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHHHHHHHHHHHHHHHhcC---------------CCCccC
Confidence 4455555555555555555 6666673 7778899999999999888776542111 011234
Q ss_pred HHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhc----------c
Q 007637 146 FAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQD----------H 215 (595)
Q Consensus 146 ~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~----------~ 215 (595)
.+.++...+++++|.+...|...+++.+..|+ +.|++.+|.++....+|..++..+...... .
T Consensus 382 ~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~-------~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~ 454 (500)
T PRK09584 382 VNWLIASYGLQSIGELMISGLGLAMVAQLVPQ-------RLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSL 454 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhh
Confidence 56788899999999999999999999999999 669999998887777777666555543211 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 216 LGWKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 216 ~g~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
.++...|...++..++..+++++..++
T Consensus 455 ~~~~~~f~~~~~~~~~~a~~~~~~~~~ 481 (500)
T PRK09584 455 EVYGRVFLQIGIATAVIAVLMLLTAPK 481 (500)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 236677776666555444444444443
No 236
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.95 E-value=7.8e-08 Score=104.37 Aligned_cols=186 Identities=13% Similarity=0.110 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGT 113 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~ 113 (595)
....+....+..+..+....+...++.+..+.+.. ........+...++.+++.++.||+ |||++++.+.+..+++.
T Consensus 254 ~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~~ 330 (451)
T PF00083_consen 254 LLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAICS 330 (451)
T ss_pred ccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 33334444444444433444444555666777766 2333344455667777888999995 99999999988877776
Q ss_pred HHHH-HhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhcc-CCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 114 TTLW-STAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAG-CVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 114 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
..++ .....+. .....+...+ +...+..++.+ +..+....+.+|.+|. +.|+++.
T Consensus 331 ~~~~~~~~~~~~---------------~~~~~~~~~i-~~~~l~~~~~~~g~~~~~~~~~~ElfPt-------~~R~~~~ 387 (451)
T PF00083_consen 331 LILGIIFFLGVS---------------SSSWWSILSI-VFLALFFAFFSLGWGPLPWIYTAELFPT-------KVRSTGI 387 (451)
T ss_pred cccccccccccc---------------cccccccccc-eeeeeccccccccccccccccccccccc-------ccccccc
Confidence 6554 1110000 0000011111 11122212222 3346667888999999 5589999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCccccc
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSHLYIK 245 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 245 (595)
++.+....+++.+++.+...+.+..+-...|.+.+.+.++..+..++..|+.++
T Consensus 388 ~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 388 GLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred ccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCC
Confidence 998888889999999888888777663445555555555555555555555433
No 237
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.94 E-value=0.00021 Score=78.64 Aligned_cols=180 Identities=12% Similarity=0.103 Sum_probs=115.2
Q ss_pred HHHHHHHhhhchHHHHHHhhhhcCCch----hhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH-------HHHHHHHH
Q 007637 41 ESFEKVASYGLLPNMIFYLMNGYHVEA----ANGASMLSIWSSISNFLAIVGAFLADSYMGRFWV-------ILLGSFSS 109 (595)
Q Consensus 41 ~~~~~~~~~~~~~~l~~yl~~~l~~s~----~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-------~~~~~~~~ 109 (595)
..+....+......++.|.++..+.+. -..+++.+...+...+..++.|++.||. |+|+. +.+|+++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 333444445555667777765333211 1234455555566667788889999995 99873 77787777
Q ss_pred HHHHHHHHHhcc-cCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 110 LLGTTTLWSTAM-IPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 110 ~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
+++.+.++.... ... .....+.+.+....+++|+|.++..|...+++.+..|+ +.++
T Consensus 357 ~~~~~~~~~~~~~~~~---------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~-------~~~g 414 (489)
T PRK10207 357 SLGFLTAAAAGMWFAD---------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQ-------HLMG 414 (489)
T ss_pred HHHHHHHHHHHHhhcC---------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChH-------HHHH
Confidence 777654422110 000 00112466677888899999999999999999999988 5589
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhc----------ccchhHHHHHHHHHHHHHHHHHHhhCccc
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQD----------HLGWKIGFGVRAILMVLSTLMFLFGSHLY 243 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~----------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 243 (595)
..+++++...++|..++..++.+... ...+.+.|...++..+++.+++++..++.
T Consensus 415 ~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~ 479 (489)
T PRK10207 415 FILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVPWL 479 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998889999888877765421 11245566665655555555555544433
No 238
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.93 E-value=3.2e-05 Score=82.51 Aligned_cols=168 Identities=10% Similarity=0.014 Sum_probs=130.2
Q ss_pred HHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhc
Q 007637 41 ESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTA 120 (595)
Q Consensus 41 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~ 120 (595)
.++-.+..-.+.+++--+ .++++-.+.--|........+-++.-++.+++..++ |+-+++..++....+=++..++..
T Consensus 380 av~mG~g~~lv~tFLfWH-led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L~ 457 (618)
T KOG3762|consen 380 AVVMGAGVGLVFTFLFWH-LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYLQ 457 (618)
T ss_pred HHHHHHHHHHHHHHHHHH-HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHhc
Confidence 333334433444555444 456776666667666667777888888999999995 999999999988887776666544
Q ss_pred ccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH-HHh
Q 007637 121 MIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA-STS 199 (595)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~ 199 (595)
++|+.+..-+++|+..+..+.++.+++++..|+ +.|.++.++... .-.
T Consensus 458 ------------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp-------~l~at~Q~l~~g~f~G 506 (618)
T KOG3762|consen 458 ------------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPP-------GLRATAQGLLQGIFHG 506 (618)
T ss_pred ------------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCC-------cchHHHHHHHHHHhcc
Confidence 688899999999999999999999999999999 447888887774 457
Q ss_pred hhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 200 VSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 200 ~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
+|-.+|.+++|.+...+|-+..|.+.++.+++.++.+.....
T Consensus 507 lG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 507 LGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred cCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 888999999999999999999998888877766666555433
No 239
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.93 E-value=0.00022 Score=77.57 Aligned_cols=205 Identities=12% Similarity=0.006 Sum_probs=139.6
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhh-cCCchh------h----HHHHHHHHHHHHHHHHHHHHHHhhccc
Q 007637 28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNG-YHVEAA------N----GASMLSIWSSISNFLAIVGAFLADSYM 96 (595)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-l~~s~~------~----~~~~~~~~~~~~~~~~~~~G~laDr~~ 96 (595)
++-+|.++.+..++++..++++.+..+...|+.++ ++-++. + ..+....+.+...+..++--++.+++
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~- 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW- 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 34457888888999999999999998888888853 443221 1 33445556666666667778889885
Q ss_pred ch-hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCC-CCCchhHHHHHHHHHHHHHhccCCccchhhhhccc
Q 007637 97 GR-FWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCS-SATPAQFAILLSSFALISIGAGCVRPCSIAFGADQ 174 (595)
Q Consensus 97 Gr-r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~ 174 (595)
|+ |++..++.++.+++.....+..+.+.-.. +.-++.-. .+.....+..++...+.|+.++.......+++++.
T Consensus 333 g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~ 408 (477)
T TIGR01301 333 GAGKRLWGIVNIILAICLAATVLVTYVAKNSR----YYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIR 408 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhccc----cccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHH
Confidence 85 67778888888888776665432110000 00000000 00011246777888889999999999999999999
Q ss_pred CCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccc--hhHHHHHHHHHHHHHHHHHHhhCcc
Q 007637 175 LDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLG--WKIGFGVRAILMVLSTLMFLFGSHL 242 (595)
Q Consensus 175 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~~~~ 242 (595)
.++++ +..|..+|+++.+..+..++..+..|.+.+..| -.+.+.++++..+++.+..++..|+
T Consensus 409 ~~~~~-----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 409 SSNLG-----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred ccccC-----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 88533 225999999999999999888887777555443 5567778888888777777666554
No 240
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.89 E-value=3.7e-05 Score=84.08 Aligned_cols=145 Identities=6% Similarity=-0.164 Sum_probs=110.1
Q ss_pred hhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCC
Q 007637 60 MNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCS 139 (595)
Q Consensus 60 ~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (595)
.+.+|+++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++.+++.....+..+. + +..
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~-~------------~~~ 345 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKR-W------------NLA 345 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeec-c------------ccc
Confidence 357999999999999999999999999999999995 99999999998888877554321100 0 000
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccc--
Q 007637 140 SATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLG-- 217 (595)
Q Consensus 140 ~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g-- 217 (595)
....+...+...-++.+++.+........++.+..|++. +++.++++....++|..+++.+++++.++.|
T Consensus 346 -~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~-------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~ 417 (468)
T TIGR00788 346 -FGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC-------ESSVFALLASILHLGSSVSGFLGVLLMETIGIT 417 (468)
T ss_pred -cCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc-------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 000122344455667788888888888999999999854 6999999999999999999999999998877
Q ss_pred ---hhHHHHHHH
Q 007637 218 ---WKIGFGVRA 226 (595)
Q Consensus 218 ---~~~~f~~~~ 226 (595)
++..+....
T Consensus 418 ~~~~~~~~~~i~ 429 (468)
T TIGR00788 418 CDNSNNLWLLIL 429 (468)
T ss_pred cccccchHHHHH
Confidence 655554433
No 241
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.88 E-value=9.4e-05 Score=59.24 Aligned_cols=67 Identities=28% Similarity=0.266 Sum_probs=55.5
Q ss_pred HHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 40 NESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 40 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
..++.-.+...+.++++.|+. +.|+++.+.|.+.++..+...++++++|+++||+ +|+|.++.....
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 344444555567789999987 4899999999999999999999999999999996 988887766543
No 242
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.84 E-value=0.00044 Score=76.59 Aligned_cols=195 Identities=13% Similarity=0.093 Sum_probs=108.2
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFS 108 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 108 (595)
..+|..........+..++-+....+....+.+..|.+... .+...+..+...++..+++++.||+ |||+.++.+.+.
T Consensus 291 ~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 291 KVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred chHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 34555555555666665555444444444445666776544 5556667777888888889999995 999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHh
Q 007637 109 SLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLE 188 (595)
Q Consensus 109 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 188 (595)
+.++.++++........ + ...........+....+.......+..|....+.+|.+|. +.|+
T Consensus 369 m~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~-------~~r~ 430 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALY----------Y-PNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPL-------RLRS 430 (513)
T ss_pred HHHHHHHHHHHHHHhcc----------C-CCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcH-------hHHh
Confidence 99998877754311110 0 0000111222222222222333333456666788999999 6688
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHH-HHHhhCccc
Q 007637 189 TFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTL-MFLFGSHLY 243 (595)
Q Consensus 189 ~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~ 243 (595)
++.++......+...+.-.....+....++...|.+.+....+... ..++..|+.
T Consensus 431 ~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 431 KGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccC
Confidence 8888755444333322222222333333334455544444444444 444445544
No 243
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.75 E-value=0.027 Score=61.18 Aligned_cols=173 Identities=10% Similarity=-0.035 Sum_probs=101.8
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCC-----chhhHHHHHHHHHHHHHHH-HHHHHHHhhcccchhH
Q 007637 27 EGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHV-----EAANGASMLSIWSSISNFL-AIVGAFLADSYMGRFW 100 (595)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~-----s~~~~~~~~~~~~~~~~~~-~~~~G~laDr~~Grr~ 100 (595)
++.+++.+.......+|-.+.|+.+.+. .+.+.. +..+..++-+...+...+. .++-+++++|+ +|++
T Consensus 2 ~~~E~~k~~~~~l~fF~il~~Y~iLR~l-----KD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~ 75 (472)
T TIGR00769 2 EVHELKKFLPLFLMFFCILFNYTILRDT-----KDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEA 75 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhh-----hhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHH
Confidence 3456677777777788877777766543 566655 3356677777665655554 78889999995 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCC--CC--CCCCCccccCCCCCCCch----hHHHHHHHHHHHHHhccCCcc-chhhhh
Q 007637 101 VILLGSFSSLLGTTTLWSTAMIPQ--LK--PAPCNQLVSSNCSSATPA----QFAILLSSFALISIGAGCVRP-CSIAFG 171 (595)
Q Consensus 101 ~~~~~~~~~~l~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~g~~~g~~~~-~~~~~~ 171 (595)
++.+....+.+.+.+.++.. .|. .. .+.|++.....+...... +.|...+..+...+-...... ...++.
T Consensus 76 lf~~~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fa 154 (472)
T TIGR00769 76 LFYTVISPFLGFFALFAFVI-YPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFA 154 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHH-hcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887777766666655542 111 00 000000000000000000 011111111112222222222 457888
Q ss_pred cccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhh
Q 007637 172 ADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQ 213 (595)
Q Consensus 172 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~ 213 (595)
.|.+..++ -.+.++++..+.|+|.++++.+..++.
T Consensus 155 ndi~t~~q-------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 155 NQITTIDE-------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhcCCHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89988844 578999999999999999999988876
No 244
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.74 E-value=0.00045 Score=75.50 Aligned_cols=118 Identities=13% Similarity=0.127 Sum_probs=80.7
Q ss_pred hhccc-cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhh
Q 007637 400 ILVKF-TGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAI 478 (595)
Q Consensus 400 ~~~~~-~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~ 478 (595)
+.||+ ++| +.+.+|.++.+++..+++... .+...+.....+..+|.++..+
T Consensus 68 LaDRilGrr-------r~iliG~il~~lg~lll~~~~---------------------~~~~~~~l~l~li~iG~G~~~~ 119 (493)
T PRK15462 68 LADKVLGNR-------MAVMLGALLMAIGHVVLGASE---------------------IHPSFLYLSLAIIVCGYGLFKS 119 (493)
T ss_pred HHHHccCcH-------HHHHHHHHHHHHHHHHHHHhh---------------------cchhHHHHHHHHHHHhcccccc
Confidence 36665 444 577888888887776554322 1222233444555567777778
Q ss_pred hHHHHHhccCCcc--hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHH
Q 007637 479 GQIEFYYSQLPKS--MSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFG 556 (595)
Q Consensus 479 ~~~~~~~~~~P~~--~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v 556 (595)
...++..|.+|++ .|.++.++++...++|+.+++.+.+.+.+.. +| ++.|.+.++..+++.+
T Consensus 120 ~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~------Gw----------~~~F~iaaigm~l~li 183 (493)
T PRK15462 120 NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY------SW----------AMGFGLAAVGMIAGLV 183 (493)
T ss_pred cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh------Ch----------HHHHHHHHHHHHHHHH
Confidence 7888999999975 7999999999999999999999999886432 33 5667776665555555
Q ss_pred HHHHh
Q 007637 557 YFLVC 561 (595)
Q Consensus 557 ~~~~~ 561 (595)
.++..
T Consensus 184 ~~~~~ 188 (493)
T PRK15462 184 IFLCG 188 (493)
T ss_pred HHHHh
Confidence 55443
No 245
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.71 E-value=0.0017 Score=69.65 Aligned_cols=90 Identities=11% Similarity=0.007 Sum_probs=78.3
Q ss_pred hhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhh
Q 007637 400 ILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIG 479 (595)
Q Consensus 400 ~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~ 479 (595)
+.+|++.| +.+.++.+..++..++.++.. +.+.+.+.-++.|++++... .
T Consensus 85 LaDrlG~K-------~vL~l~~l~Wsl~t~L~~fa~----------------------Sl~~L~i~R~llGvaEA~~~-A 134 (511)
T TIGR00806 85 LTDYLRYK-------PVLVLQALSFVCVWLLLLLGT----------------------SVWHMQLMEVFYSVTMAARI-A 134 (511)
T ss_pred HHHHhCch-------HHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHH-H
Confidence 36765554 688888888888888887765 77888889999999999999 9
Q ss_pred HHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007637 480 QIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVD 519 (595)
Q Consensus 480 ~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~ 519 (595)
...++++.+|++.|+++.|+++.+..+|.++++.+++++.
T Consensus 135 ~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 135 YSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999843
No 246
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.67 E-value=0.1 Score=56.07 Aligned_cols=190 Identities=13% Similarity=-0.023 Sum_probs=99.9
Q ss_pred hhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 33 TMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
..+.+...+++.+...-....-.+.|+.+-+.-+---.+..-.+-.+..+++.+.-|...||. -|.+++..+.+..-++
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLS 81 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHH
Confidence 345556666666666655555667777766554444444444445555667777888999996 9999888876653333
Q ss_pred HH----HHHHhcccCCCCCCCCCccccCCCCCC-CchhHHHHHHHHHHHH-HhccCCccchhhhhcccCCCCCCcchhhh
Q 007637 113 TT----TLWSTAMIPQLKPAPCNQLVSSNCSSA-TPAQFAILLSSFALIS-IGAGCVRPCSIAFGADQLDNKDNPKNKRV 186 (595)
Q Consensus 113 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (595)
.. +.......+. ... .......+++...+.+ +..=+......++=-|+...-...+ ...
T Consensus 82 v~~s~~~~~~l~~~~~--------------~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~-~~~ 146 (432)
T PF06963_consen 82 VAASCALFLLLLSYPS--------------SSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGD-PGA 146 (432)
T ss_pred HHHHHHHHHHHHhCCc--------------cccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCC-hhh
Confidence 22 2221110110 000 0112222333222222 2211112222333334433211000 023
Q ss_pred HhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHh
Q 007637 187 LETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 187 r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
+.+..+...-.=-+.-+++|++.|.+....|......+.++..+++...=++
T Consensus 147 La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 147 LARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444333334677899999999999888888777766666666555333
No 247
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.60 E-value=0.00047 Score=78.23 Aligned_cols=63 Identities=13% Similarity=0.037 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007637 459 AMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRV 521 (595)
Q Consensus 459 ~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~ 521 (595)
+..+++.-++.|+|.+...+...+++.|.+|++.|+.++|+++....+|..+|+.+++.+.+.
T Consensus 172 ~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 172 WLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred ehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 455667889999999999999999999999999999999999999999999999999987754
No 248
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.56 E-value=7.6e-05 Score=78.30 Aligned_cols=166 Identities=14% Similarity=0.076 Sum_probs=119.7
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcc---cchhHHHHHH-HH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSY---MGRFWVILLG-SF 107 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~~~-~~ 107 (595)
+.+..+..+.+...+++-.=.+++++|++ .+|++.+-.+.+-.+.-+...+.+|+-|..+||+ +||||-++.. ..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 55555555666666776666788889976 6899999999999999999999999999999975 5888866655 44
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhh
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSS-ATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRV 186 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (595)
..+++..+..+++++..+.. ++... .+.-....++++.-+.=++.......+-++++|....+++ ++
T Consensus 111 ~i~~~l~Lig~aaDig~~lg--------d~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~----~~ 178 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLG--------DNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK----KT 178 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhc--------CCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh----hh
Confidence 56666666666654443211 11111 1123456677777777788878888899999999988664 33
Q ss_pred HhhHHHHHHHHHhhhhHHHHHHHHHh
Q 007637 187 LETFFNWYYASTSVSGMLAFTIIVYI 212 (595)
Q Consensus 187 r~~~~~~~~~~~~~g~~~~p~~~~~l 212 (595)
| +.+++-..+.+|+.+|..++++.
T Consensus 179 ~--Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 179 R--ANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred c--cchhHHHHHHhcceeeeeccccc
Confidence 4 78888888899999988776643
No 249
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.49 E-value=0.0002 Score=75.20 Aligned_cols=178 Identities=17% Similarity=0.134 Sum_probs=116.3
Q ss_pred chhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHH--------HHHHHHHHHHH-HHHHHHHHhhcccchhHHH
Q 007637 32 RTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGAS--------MLSIWSSISNF-LAIVGAFLADSYMGRFWVI 102 (595)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~--------~~~~~~~~~~~-~~~~~G~laDr~~Grr~~~ 102 (595)
+.+.......|...+++|+...+...-++ .+|+.+.+... ...+....+.+ +-.++.++.|+ +|||+..
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHH
Confidence 45556666778888888887655544433 45555544333 12222222222 55566788999 5999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHH-HHHHHHHHhccCCccchhhhhcccCCCCCCc
Q 007637 103 LLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILL-SSFALISIGAGCVRPCSIAFGADQLDNKDNP 181 (595)
Q Consensus 103 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~ 181 (595)
+.|.+++.+..+.++...+. ..+...+..++ +..++.-+|= ..+...+-+|.||.
T Consensus 382 ~~GF~~~~i~~~~~~~~y~~-----------------~~~~~Gf~v~y~l~~ff~NFGP---n~ttfivpaE~FPa---- 437 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYNQ-----------------LENTIGFVVLYSLTFFFGNFGP---NATTFIVPAEIFPA---- 437 (538)
T ss_pred HhhHHHHHHHHHHHcCCccc-----------------ccccCceeehHHHHHHHHhcCC---CceeEEeehhhchH----
Confidence 99999888877666543210 11111222222 2223333332 23445556788999
Q ss_pred chhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHHHh
Q 007637 182 KNKRVLETFFNWYYASTSVSGMLAFTIIVYIQD-----HLGWKIGFGVRAILMVLSTLMFLF 238 (595)
Q Consensus 182 ~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~-----~~g~~~~f~~~~~~~~~~~~~~~~ 238 (595)
++|++..++.-...-+|++++.....++.+ ..+.+.+|++.+.+++++.+.-++
T Consensus 438 ---rvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 438 ---RVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred ---HHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 889999999999999999999999999998 678999999888877766665444
No 250
>PTZ00207 hypothetical protein; Provisional
Probab=97.45 E-value=0.0024 Score=71.25 Aligned_cols=125 Identities=14% Similarity=0.087 Sum_probs=88.4
Q ss_pred hhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHh
Q 007637 398 VPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNA 477 (595)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~ 477 (595)
.++.+|++.| +.+.+|.++.++++++.++... +. ...+.+.+.+..++.|+|.+..+
T Consensus 82 G~L~Dr~G~R-------~vllig~ll~~iG~ll~ala~~---------~~-------i~~s~~~l~l~r~l~G~G~~~~~ 138 (591)
T PTZ00207 82 SFIYDYLGPR-------PIFVLSMTVFCLGTLLFALTFQ---------EV-------IEGSVVRLSVYNGLMTLGCMLFD 138 (591)
T ss_pred HHHHHHhCcH-------HHHHHHHHHHHHHHHHHHHHhc---------cc-------ccCcHHHHHHHHHHHHHHHHHHH
Confidence 3446665544 6888999999999988877530 00 01367777788889999999999
Q ss_pred hhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHH
Q 007637 478 IGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGY 557 (595)
Q Consensus 478 ~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~ 557 (595)
+.......+.+| +.||.++|+.....++|+.+.+.+...+... + ..++|++.+++.++..++
T Consensus 139 ~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-------~----------~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 139 LGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-------N----------TSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------h----------HHHHHHHHHHHHHHHHHH
Confidence 998999999998 5699999999999999998644443333210 1 245677777777776665
Q ss_pred HHHhhh
Q 007637 558 FLVCCW 563 (595)
Q Consensus 558 ~~~~~~ 563 (595)
.+.+.+
T Consensus 201 ~~~~vr 206 (591)
T PTZ00207 201 AIVFMR 206 (591)
T ss_pred HHhhee
Confidence 555543
No 251
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.40 E-value=0.00063 Score=70.00 Aligned_cols=110 Identities=9% Similarity=0.026 Sum_probs=82.6
Q ss_pred cccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCcccc
Q 007637 377 SFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMD 456 (595)
Q Consensus 377 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (595)
.+.+...+.-.+..|.++.+ .++++|| ..+.+|....+++++.++...
T Consensus 72 flGSsF~ilQ~~sS~~~G~~----SD~yGRk-------pvll~c~~~va~s~ll~~~S~--------------------- 119 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCL----SDRYGRK-------PVLLACLIGVALSYLLWALSR--------------------- 119 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhh----hhhhCch-------HHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 34444455444555554444 5666666 478888888888888887654
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007637 457 MSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDR 520 (595)
Q Consensus 457 ~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~ 520 (595)
+...++.+-++.|+..+-..+ .-+++.|.++++.|+.+|+...+..++|-++||.+++++..
T Consensus 120 -~F~afv~aR~l~Gi~kgnl~v-~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 120 -NFAAFVLARFLGGIFKGNLSV-IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred -HHHHHHHHHHhhhhccCchHH-HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 444555567888888776654 46799999999999999999999999999999999998876
No 252
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.38 E-value=0.074 Score=55.05 Aligned_cols=62 Identities=8% Similarity=0.044 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007637 461 WLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVT 522 (595)
Q Consensus 461 ~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~ 522 (595)
.++..+.+.+......+....++-++.+|+...|+.|.+.|+...+|+.--..+...+.|..
T Consensus 371 l~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 371 LLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 34446788888888888899999999999999999999999999998887666766666644
No 253
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.31 E-value=0.0034 Score=69.71 Aligned_cols=136 Identities=12% Similarity=0.231 Sum_probs=91.4
Q ss_pred cccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCcccc
Q 007637 377 SFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMD 456 (595)
Q Consensus 377 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (595)
++...+.+...+..|+. .++.|.++|| ..++.|.++..++.++.+-.+
T Consensus 82 w~~~~~~l~~av~~~~~----G~LSDlfGRr-------~~~i~g~~l~vvG~Iv~atA~--------------------- 129 (599)
T PF06609_consen 82 WFSTAWTLASAVSFPFV----GRLSDLFGRR-------YFFIIGSLLGVVGSIVCATAQ--------------------- 129 (599)
T ss_pred HHHHHHHHHHHHHHHhh----HHHHHHhcch-------HHHHHHHHHHHhHHHHhhcCC---------------------
Confidence 44444455444455543 3345666655 588889999999999887544
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCC
Q 007637 457 MSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLN 536 (595)
Q Consensus 457 ~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~ 536 (595)
+...++.+.++.|+|.+.... ....+.|..|.+.|..+.++.....-.....++.+...+.. ..+|
T Consensus 130 -~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~------~~~W------ 195 (599)
T PF06609_consen 130 -NMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA------HSGW------ 195 (599)
T ss_pred -cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc------CCCc------
Confidence 666788888999998666654 45568999999999887776665544444455555544321 1356
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhh
Q 007637 537 KGHLDYFYWLLMAMCLVNFGYFLVCC 562 (595)
Q Consensus 537 ~~~~~~~f~~~~~~~l~~~v~~~~~~ 562 (595)
+|.|++.+++..++++...++.
T Consensus 196 ----Rw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 196 ----RWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHh
Confidence 7888888888877776655543
No 254
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.22 E-value=0.0089 Score=54.80 Aligned_cols=113 Identities=14% Similarity=0.204 Sum_probs=85.3
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCc
Q 007637 64 HVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATP 143 (595)
Q Consensus 64 ~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (595)
++++.....-+++.+....+..++...+.++ +|.|+.+++|.+.+.+-...... .
T Consensus 33 ~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~~-~----------------------- 87 (156)
T PF05978_consen 33 SISAGLGYYSLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFFY-P----------------------- 87 (156)
T ss_pred cccccccHHHHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHh-h-----------------------
Confidence 3445555666777888888888999999999 59999999999887754433321 1
Q ss_pred hhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHH
Q 007637 144 AQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTII 209 (595)
Q Consensus 144 ~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~ 209 (595)
+.+.++.+-++.|++.+..+.+...++.+..++ +.|++..+++....+.+.++|.++.
T Consensus 88 -~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~-------~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 88 -NSYTLYPASALLGFGAALLWTAQGTYLTSYSTE-------ETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred -hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH-------HHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 467888999999999999999999999877665 3367777777766666666666444
No 255
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.91 E-value=0.008 Score=48.78 Aligned_cols=65 Identities=11% Similarity=-0.016 Sum_probs=58.1
Q ss_pred HHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhc
Q 007637 55 MIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTA 120 (595)
Q Consensus 55 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~ 120 (595)
+.+.+.++.++|.++++++.+..++++.+|++...++.++. .+++.+..+++...+.+..+++..
T Consensus 14 lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44567889999999999999999999999999999999984 889999999999888888888754
No 256
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.89 E-value=0.0053 Score=66.56 Aligned_cols=127 Identities=17% Similarity=0.228 Sum_probs=105.8
Q ss_pred HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHH-HHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCc
Q 007637 54 NMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGA-FLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQ 132 (595)
Q Consensus 54 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G-~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 132 (595)
.+..|+...++++..+.+.+.+...+...+++++.. .+.-. +|-|+++..|+....+.....++..
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~~------------ 329 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFAT------------ 329 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHhc------------
Confidence 446788889999999999999999999999999888 55555 6999999999999999988888876
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHh
Q 007637 133 LVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYI 212 (595)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l 212 (595)
+.++.+...++.++. +...|...++.+.+.+.++ +|+.+++......+.++++|.+-+.+
T Consensus 330 ------------~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e-------~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 330 ------------ETWMMFAAGVVVALA-GIVFPAIRAFASILVSPEE-------QGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred ------------cchhhhHHHHHHHhh-cchhHHHHhHHHhhccccc-------ccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 566677777776555 5667888999988888855 79999999999999999998887765
Q ss_pred h
Q 007637 213 Q 213 (595)
Q Consensus 213 ~ 213 (595)
.
T Consensus 390 ~ 390 (463)
T KOG2816|consen 390 F 390 (463)
T ss_pred H
Confidence 3
No 257
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.82 E-value=0.0052 Score=64.82 Aligned_cols=157 Identities=14% Similarity=0.103 Sum_probs=96.2
Q ss_pred hcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCC
Q 007637 62 GYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSA 141 (595)
Q Consensus 62 ~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (595)
.-|.+...+|.+.....++++++.+++|.++||.-.-|+++++......++...+.... .
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t-~------------------- 354 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCT-L------------------- 354 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh-c-------------------
Confidence 34677788999999999999999999999999963334555555555555532221111 1
Q ss_pred CchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccc----
Q 007637 142 TPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLG---- 217 (595)
Q Consensus 142 ~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g---- 217 (595)
.....+.++....++|+..-...|.-.-+..|..-+..+ ++..|+.....++-+.+-.++.+...+..+
T Consensus 355 ~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~ 427 (480)
T KOG2563|consen 355 FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGN 427 (480)
T ss_pred cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccceeEEeehhHHHHHHHHHHHHHhhccCCCCC
Confidence 112345566667777777777888877777765544332 455666665555555555556666666555
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhCccccc
Q 007637 218 WKIGFGVRAILMVLSTLMFLFGSHLYIK 245 (595)
Q Consensus 218 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 245 (595)
|...-+......++.+++..+.++++++
T Consensus 428 ~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 428 TFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred CccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 4433333444444555555565655543
No 258
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.82 E-value=0.017 Score=64.11 Aligned_cols=114 Identities=12% Similarity=0.108 Sum_probs=91.8
Q ss_pred hhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHH
Q 007637 396 AVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAF 475 (595)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~ 475 (595)
+..++.++++|| ..+.+++++..+.-+..++.. +++...+.-++.|++...
T Consensus 137 i~g~lsD~~GRk-------~~~~~~~~~~~i~~~~~a~a~----------------------~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 137 IFGPLSDRFGRK-------PVLLVSLLLFIIFGILTAFAP----------------------NYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hheehHhhcccH-------HHHHHHHHHHHHHHHHHHHhC----------------------cHHHHHHHHHHHHhhccc
Confidence 344567776666 467777777776666666554 888888999999999999
Q ss_pred HhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHH
Q 007637 476 NAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNF 555 (595)
Q Consensus 476 ~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~ 555 (595)
.....+.+..|..+++.|+.++.+ ......++.+++...+++.. +| ++.+++..+.+++..
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~W----------r~~~~~~~~~~~~~~ 248 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DW----------RWLFWIISIPSGLFL 248 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hH----------HHHHHHHHHHHHHHH
Confidence 999999999999999999999999 88888888888888887763 56 778888888887766
Q ss_pred HH
Q 007637 556 GY 557 (595)
Q Consensus 556 v~ 557 (595)
++
T Consensus 249 ~~ 250 (521)
T KOG0255|consen 249 LL 250 (521)
T ss_pred HH
Confidence 65
No 259
>PRK03612 spermidine synthase; Provisional
Probab=96.76 E-value=0.073 Score=58.92 Aligned_cols=161 Identities=9% Similarity=-0.054 Sum_probs=90.9
Q ss_pred HHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH-HHHHHH-HHHHHH
Q 007637 39 VNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILL-GSFSSL-LGTTTL 116 (595)
Q Consensus 39 ~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~-~~~~~~-l~~~~~ 116 (595)
...++..++.-+......-.+...+|-+..+.+.+++++..+..+|..++|+++++. -|+....- ++.+.. ++..++
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~ll 99 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSALIL 99 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555566666667899999999999999999999999999888552 33322111 111111 111111
Q ss_pred HHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHH
Q 007637 117 WSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYA 196 (595)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 196 (595)
.... +. .......++...++.++..|+..|....+..+...+ .-+...|..|.
T Consensus 100 ~~~~--~~-----------------~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~--------~~g~~~g~ly~ 152 (521)
T PRK03612 100 YAAF--AF-----------------QGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQ--------HLGHNVATVLA 152 (521)
T ss_pred HHHH--HH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--------chhhhhhhhHh
Confidence 1111 00 000112233334456677777777766655432221 13456777788
Q ss_pred HHhhhhHHHHHHHHHhh-cccchhHHHHHHHH
Q 007637 197 STSVSGMLAFTIIVYIQ-DHLGWKIGFGVRAI 227 (595)
Q Consensus 197 ~~~~g~~~~p~~~~~l~-~~~g~~~~f~~~~~ 227 (595)
...+|+++|.++.+++. ...|-....++.+.
T Consensus 153 ~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~ 184 (521)
T PRK03612 153 ADYLGALVGGLAFPFLLLPRLGLIRTAALTGS 184 (521)
T ss_pred HHhHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 88889999998888654 35664434333333
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.75 E-value=0.05 Score=58.78 Aligned_cols=147 Identities=12% Similarity=0.038 Sum_probs=93.5
Q ss_pred hhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccc-hHHHHHHHHHHHHHHHHHH
Q 007637 398 VPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDM-SAMWLIPQFSLIGLAEAFN 476 (595)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~~~l~g~g~~~~ 476 (595)
.++...+..|. .+.++-++.|.++++++-+++..... .+. ..+++.++.++.|+|.+..
T Consensus 88 ~liF~~Ws~k~--~~~k~Pli~s~ii~~~g~llY~~l~~------------------~~~~~~y~mL~~R~l~Gvg~~n~ 147 (488)
T KOG2325|consen 88 SLIFGIWSNKT--GSVKKPLIVSFLIAIIGNLLYLALAY------------------VPNGVKYLMLVARILTGVGVGNF 147 (488)
T ss_pred chhhccccccc--CCcccCHHHHHHHHHHHHHHHHHHHh------------------cccchHHHHHHHHHHcCcCcccH
Confidence 33344444442 33345688898888888877754441 122 6678888999999984443
Q ss_pred hhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHH
Q 007637 477 AIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFG 556 (595)
Q Consensus 477 ~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v 556 (595)
...=.|+++.+-.+.|.++++....+..+|..+||.+...+.....+. ..|.++ ..-+.|...-|+++.++++.++
T Consensus 148 -a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G--~~i~~~-~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 148 -AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKG--FMILPG-LIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred -HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCc--eEEcCc-ceEEecchHHHHHHHHHHHHHH
Confidence 344567777666677888888888877888888877765554332211 122221 2223455667788888888888
Q ss_pred HHHHhhhccccc
Q 007637 557 YFLVCCWAYGPS 568 (595)
Q Consensus 557 ~~~~~~~~~~~~ 568 (595)
...++.+|...+
T Consensus 224 ~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 224 IILFFFKEVYRG 235 (488)
T ss_pred HHHhheeecccC
Confidence 887777665443
No 261
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.57 E-value=0.015 Score=61.58 Aligned_cols=125 Identities=11% Similarity=0.027 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcc---
Q 007637 415 MRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKS--- 491 (595)
Q Consensus 415 ~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~--- 491 (595)
+.+.+|.++..++++++.+.... .. .....+.+.+.+++.+.++|.++.-|+...+..|+++++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~-------~~------~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~ 68 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIP-------PS------LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDS 68 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTS-------SS------C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTT
T ss_pred HhhhHHHHHHHHHHHHhHHHHhc-------ch------hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchh
Confidence 45778888899998886665410 00 001234567788888999999999999999999999976
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhccccc
Q 007637 492 MSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGPS 568 (595)
Q Consensus 492 ~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~~~ 568 (595)
.|..+...++.+.++|..++..+.+++.+. .++...|.+.++..+++.+.++...+.++++
T Consensus 69 ~~~~~F~~fY~~in~G~~~~~~~~~~i~~~----------------~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 69 RRDSFFNWFYWGINIGSLFSPTLVPYIQQN----------------YGWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCHHHHC----------------S-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhhhHHHHHHHHhhhhHhhcccchhhccc----------------cchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 455666777888899999988887666532 2346788888888888888888776666555
No 262
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.47 E-value=0.3 Score=55.55 Aligned_cols=133 Identities=10% Similarity=0.029 Sum_probs=86.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcc
Q 007637 412 SPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKS 491 (595)
Q Consensus 412 ~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~ 491 (595)
+..+.+.++.++..+++.++++... . .............++.+.++|.++.-|...++..++.+++
T Consensus 52 G~~~tIl~~~ii~~lG~~llai~a~---------~-----~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~ 117 (654)
T TIGR00926 52 GKFKTILYLSIVYVVGHALLSFGAI---------P-----SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEER 117 (654)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhccC---------c-----ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCcc
Confidence 3346777888888888877765320 0 0000112233556778889999999999999999998754
Q ss_pred ---hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007637 492 ---MSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYGP 567 (595)
Q Consensus 492 ---~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~~ 567 (595)
.+-....++..+.++|+++++.+.+.+....... .....+...|.+.++..++++++++...+.+++
T Consensus 118 ~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f---------g~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~ 187 (654)
T TIGR00926 118 QLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF---------GCQDCYPLAFGVPAILMILALIVFMAGSKMYKK 187 (654)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---------ccCcchHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 3556677777788888888888877764211000 001234667888888888888877766655543
No 263
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.33 E-value=0.44 Score=47.35 Aligned_cols=92 Identities=11% Similarity=0.113 Sum_probs=64.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCc
Q 007637 411 LSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPK 490 (595)
Q Consensus 411 ~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~ 490 (595)
..|...+.+|.+...+++..+...-. +. ..+.+.|.+.+..++.+.+....+........+.+|.
T Consensus 63 ~gp~~~l~iG~~~~~~GY~~~~l~~~---------~~------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~ 127 (250)
T PF06813_consen 63 FGPWVVLLIGAVLGFVGYGLLWLAVS---------GR------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR 127 (250)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHh---------Cc------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc
Confidence 44556778888888888876654431 10 0124666666666777777777777777777899995
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007637 491 SMSSMAMAIFTLGMAVANLLGGLLVKIV 518 (595)
Q Consensus 491 ~~rg~~~gl~~~~~~lg~~~g~~l~~~i 518 (595)
.||++.|+--...++++.+-+.+...+
T Consensus 128 -~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 128 -SRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred -ccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 699999999888888888766664443
No 264
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.26 E-value=0.0031 Score=69.97 Aligned_cols=63 Identities=21% Similarity=0.134 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007637 459 AMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRV 521 (595)
Q Consensus 459 ~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~ 521 (595)
.++++++.++.|+|..-.++...+|+-|.++++..+.+.|+.+.+..+|-.+|-.+++.....
T Consensus 141 ~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~ 203 (539)
T PF03137_consen 141 FYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRI 203 (539)
T ss_dssp -----------SSS-------------------------------------------------
T ss_pred HHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhc
Confidence 456777889999999999999999999999999999999999999999999988887766654
No 265
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.22 E-value=0.14 Score=58.00 Aligned_cols=100 Identities=13% Similarity=0.089 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC---------CCccc
Q 007637 461 WLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHG---------KESWL 531 (595)
Q Consensus 461 ~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~---------~~~w~ 531 (595)
.++++.++.|+|..-.++...+|+-|.+-++..+.+.|+.+....+|-++|-.++++....+..-+ ...|+
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWI 318 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWI 318 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchh
Confidence 566688999999999999999999999999999999999999999999999888888776553210 11232
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhccc
Q 007637 532 SSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAYG 566 (595)
Q Consensus 532 ~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~~ 566 (595)
. .-..-|++.+++.++..+.++++-++..
T Consensus 319 G------AWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 319 G------AWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred h------HHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 1 1222455666666666666665554444
No 266
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=94.69 E-value=0.42 Score=51.54 Aligned_cols=167 Identities=14% Similarity=0.104 Sum_probs=98.2
Q ss_pred HHHHHHhhhhcCCc----hhhHHHHHHHHHHHHHHHHHHHHHHhhcccchh-------HHHHHHHHHHHHHHHHHHHhcc
Q 007637 53 PNMIFYLMNGYHVE----AANGASMLSIWSSISNFLAIVGAFLADSYMGRF-------WVILLGSFSSLLGTTTLWSTAM 121 (595)
Q Consensus 53 ~~l~~yl~~~l~~s----~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr-------~~~~~~~~~~~l~~~~~~~~~~ 121 (595)
+.+..|..+..+.+ +-..++.-+.-.+.-.+..|+..++--+. +++ .-+-+|+++...+++++.....
T Consensus 305 ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~ 383 (498)
T COG3104 305 SSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAGI 383 (498)
T ss_pred chHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 45556655432211 12233444555555555566666666552 443 2355566666666666554410
Q ss_pred cCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhh
Q 007637 122 IPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVS 201 (595)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 201 (595)
... .-.+..+.+.++...+++++|.=+..|...+++....|+ +..+..++++......|
T Consensus 384 ~~~--------------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~-------~~~s~~ma~wfLt~a~~ 442 (498)
T COG3104 384 WFG--------------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPP-------ALKSFIMAMWFLTVAAG 442 (498)
T ss_pred hhc--------------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChH-------HHHHHHHHHHHHHHHHH
Confidence 000 001224788899999999999999999999999999998 55788888777766666
Q ss_pred hHHHHHHHHH------hhcccchhHHHHHHHHHHHHHHHHHHhhCc
Q 007637 202 GMLAFTIIVY------IQDHLGWKIGFGVRAILMVLSTLMFLFGSH 241 (595)
Q Consensus 202 ~~~~p~~~~~------l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 241 (595)
..++-.+.+. ..+.......|+..+...++..+.+....+
T Consensus 443 ~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 443 QTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred HHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 6665555542 222234555666666555544444444333
No 267
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.64 E-value=8 Score=41.88 Aligned_cols=58 Identities=17% Similarity=0.212 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 007637 458 SAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLV 515 (595)
Q Consensus 458 s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~ 515 (595)
+-++.++..++.|+..+........+..+..+++.|..+..+..++-.+|-.+|+.+.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666788999999999999999999999999998888888888888888887663
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.62 E-value=0.45 Score=51.53 Aligned_cols=116 Identities=19% Similarity=0.072 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCC--cch
Q 007637 415 MRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLP--KSM 492 (595)
Q Consensus 415 ~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P--~~~ 492 (595)
.-+.+|.++.+++...++.... ...+.......+++..+|..+.....-++..|... ++.
T Consensus 60 ~Y~~i~~~~~~~~~~~~~~~~~------------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~ 121 (433)
T PF03092_consen 60 PYMIIGWLLGAVSALVLALLPA------------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES 121 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhccc------------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch
Confidence 4566666666666665655441 11244455667778889999999999988888863 223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhc
Q 007637 493 SSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWA 564 (595)
Q Consensus 493 rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~ 564 (595)
+|..++..+.+..+|+.++..++|.+.+..+ +...|.+.+++.++..+..+++..+
T Consensus 122 ~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~----------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 122 RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG----------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC----------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 8899999999999999999999888765331 2234666666666665555555444
No 269
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.78 E-value=2.4 Score=45.69 Aligned_cols=137 Identities=12% Similarity=0.033 Sum_probs=103.9
Q ss_pred chHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 007637 51 LLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPC 130 (595)
Q Consensus 51 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 130 (595)
+-..+..|+..+ |+++...|..-+...+....+..+..++.+|+ |..|.=++++........++..+-+.+.-.
T Consensus 277 f~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~---- 350 (432)
T PF06963_consen 277 FGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSP---- 350 (432)
T ss_pred CcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCC----
Confidence 345678888876 99999999999999999999999999999995 999999999887666655554433333200
Q ss_pred CccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHH
Q 007637 131 NQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIV 210 (595)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~ 210 (595)
....+...++.+.++--+|.=++--+...++-|..|+ ++|+...+.-....++.-++-..++-
T Consensus 351 ----------~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~-------~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 351 ----------FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPE-------SERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred ----------chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCH-------HHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 0123556666777777777777777888888888888 55899999988888888877775543
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.44 E-value=1.8 Score=39.66 Aligned_cols=61 Identities=18% Similarity=0.213 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007637 458 SAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIV 518 (595)
Q Consensus 458 s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i 518 (595)
+.+.+.+.-++.|++.+..++..-.++.+...++.+++-.|+++...+.+...|..+.-.+
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788889999999999999999999999999999999999999999888887765443
No 271
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.35 E-value=13 Score=40.94 Aligned_cols=167 Identities=11% Similarity=0.040 Sum_probs=90.7
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCC---chhhHHHHHHHHHH-HHHHHHHHHHHHhhcccchhHH
Q 007637 26 PEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHV---EAANGASMLSIWSS-ISNFLAIVGAFLADSYMGRFWV 101 (595)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~---s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~ 101 (595)
..+.+++..+.+.+..++..+.|..+.. +++.+=+ ++.....+=..... ...+...+-.+++|++ +|.++
T Consensus 18 i~~~E~~k~~~l~~m~f~i~f~y~~lR~-----~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~l 91 (491)
T PF03219_consen 18 IHRSELKKFLPLALMFFFILFNYTILRD-----LKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKL 91 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHH
Confidence 3556677777777777776665444332 2332211 33344444333333 4555667789999995 99999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCCCccc-cCCC---CCCCchhHH------------HHHHHHHHHHHhccCCcc
Q 007637 102 ILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLV-SSNC---SSATPAQFA------------ILLSSFALISIGAGCVRP 165 (595)
Q Consensus 102 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~------------~~~~~~~l~g~~~g~~~~ 165 (595)
+.+....+...+.+.++.. .|. ++-+. ...+ ......... .+++.-=+.| ....+
T Consensus 92 Fy~~~~~F~~fF~~f~~vl-yP~-----~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwg---svvlS 162 (491)
T PF03219_consen 92 FYIIIIPFLGFFALFAFVL-YPN-----RDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWG---SVVLS 162 (491)
T ss_pred HHHHHHHHHHHHHHHHHHH-hhc-----hhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 9887777666666655543 121 00000 0000 000000111 1111111111 11111
Q ss_pred -chhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhc
Q 007637 166 -CSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQD 214 (595)
Q Consensus 166 -~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~ 214 (595)
.-.++..|....++ -.+.++++..+.|+|.+++..+..++.+
T Consensus 163 lLFW~fAN~itt~~e-------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 163 LLFWGFANEITTVEE-------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHhcCCHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23666777777743 5789999999999999998888888777
No 272
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=92.36 E-value=6.4 Score=41.98 Aligned_cols=62 Identities=18% Similarity=0.189 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007637 458 SAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDR 520 (595)
Q Consensus 458 s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~ 520 (595)
+.+++-+..++.|++... -...++|++...|++.--++.+..-...-+|..++..++.++..
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888888887655 57778999999999988899988888888888888888777664
No 273
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.20 E-value=4.4 Score=43.92 Aligned_cols=116 Identities=17% Similarity=0.179 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCC--chhHHHHHHH
Q 007637 77 WSSISNFLAIVGAFLADSY--MGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSAT--PAQFAILLSS 152 (595)
Q Consensus 77 ~~~~~~~~~~~~G~laDr~--~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 152 (595)
...+..++.++.+.+++|. +||++++.++..+..++.++.-++. |.++| +..|-+... +.+.....+.
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~dap------~~~t~~~~~~~~~~~~~~~ii 359 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PNDAP------LRPTDSPPLLFTPSYYLALII 359 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--cccCC------CCCCcccccccccchhHHHHH
Confidence 3344555555566666532 4889999999988888877665432 22221 111111111 1234455566
Q ss_pred HHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHH
Q 007637 153 FALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTI 208 (595)
Q Consensus 153 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~ 208 (595)
-+++|++-+......+.++++.+|++ |..+++++-.-..++..++...
T Consensus 360 ~~l~G~~D~~~~t~~~~ii~~~~~~~--------~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 360 GFLLGFGDACFNTQRYVIIALLYPDD--------RAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCc--------hHHHHHHHHHHHHHHHHHHhhh
Confidence 67789999999999999999999553 5666666655555555544433
No 274
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.00 E-value=0.96 Score=48.27 Aligned_cols=130 Identities=18% Similarity=0.080 Sum_probs=87.5
Q ss_pred cccccchhHHHHHHHHHhHhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCcc
Q 007637 375 AGSFTVFTIITVTLWIAIYDRAVVPILVKFTGHPRGLSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKV 454 (595)
Q Consensus 375 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (595)
.+.+....++..++.+|+.+...++--.|++||+ .-+..+.+++.+++.++++........ .+++..+
T Consensus 69 ~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR------PfI~~~s~~i~~~l~Lig~aaDig~~l------gd~~~~~ 136 (498)
T KOG0637|consen 69 SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR------PFILAGSLLIAVSLFLIGYAADIGLLL------GDNERKP 136 (498)
T ss_pred ccccccccccccceeccccccccccccccccccc------chHHHhhHHHHHHHhhhhhHhhhhHHh------cCCcccc
Confidence 3445555677788888988888777677777664 346677777788887777654111111 1111110
Q ss_pred -ccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhH-HHHHHHHHHHHHHHHHHHHHH
Q 007637 455 -MDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSM-AMAIFTLGMAVANLLGGLLVK 516 (595)
Q Consensus 455 -~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~-~~gl~~~~~~lg~~~g~~l~~ 516 (595)
.+-.+...++.+.+.=+.......+.=++..+..-.+.+.+ +++.+.+..++|+.+|-++.+
T Consensus 137 ~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 137 VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 11233445556666667777777888889999988777777 999999999999999977765
No 275
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=91.88 E-value=22 Score=38.77 Aligned_cols=63 Identities=10% Similarity=0.027 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 007637 461 WLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTR 523 (595)
Q Consensus 461 ~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~ 523 (595)
.++..+++..+.....+....++-++.+++.+-|++|.+.|+.+++|+.--..++-.+.|...
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 344577888888888889999999999999999999999999999999887777666666543
No 276
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.73 E-value=2.5 Score=42.03 Aligned_cols=174 Identities=10% Similarity=0.026 Sum_probs=98.8
Q ss_pred hHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchh--HHHHHHHHHHHH
Q 007637 34 MPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRF--WVILLGSFSSLL 111 (595)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~~~~~~~~~~l 111 (595)
.+...+-..+|...|..+.-|.|..=-++. ..--|.+.+.+..++.++.-+..++..|. ..| ..+.+..++...
T Consensus 251 ~LLG~iqsLFE~smytFVFLWTPaLspn~e---~iPhGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a 326 (454)
T KOG4332|consen 251 ALLGAIQSLFEGSMYTFVFLWTPALSPNDE---EIPHGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIA 326 (454)
T ss_pred HHHHHHHHHHhhhhheeeeeecccCCCCcc---cCCchhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHH
Confidence 333444455565544443334332211111 22357888888888877777777776663 222 344444444333
Q ss_pred HHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHH
Q 007637 112 GTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFF 191 (595)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 191 (595)
...+..+.. .. +++.+++..-+++..++-.+.|.++|.+.-+-.+..|++ .|++.+
T Consensus 327 ~l~Lpilt~-~v----------------sP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEe-------arstim 382 (454)
T KOG4332|consen 327 ALLLPILTS-SV----------------SPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEE-------ARSTIM 382 (454)
T ss_pred HHHHHHHHh-cc----------------CCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHH-------HHhhhh
Confidence 332222211 00 012345555577788888889999999999998888884 489999
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Q 007637 192 NWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 192 ~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (595)
+++..-.|+-.-++-..--.-....+-|..|.++.+...++.+.
T Consensus 383 NfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 383 NFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred hheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 99998777755433211000001135667888887776665444
No 277
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=90.41 E-value=15 Score=38.26 Aligned_cols=89 Identities=13% Similarity=0.048 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHh-----ccCCcchhhHHHHHHH-HHHHHHHHHHHHHHHHHhhhhccCCCCccc
Q 007637 458 SAMWLIPQFSLIGLAEAFNAIGQIEFYY-----SQLPKSMSSMAMAIFT-LGMAVANLLGGLLVKIVDRVTRKHGKESWL 531 (595)
Q Consensus 458 s~~~~~~~~~l~g~g~~~~~~~~~~~~~-----~~~P~~~rg~~~gl~~-~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~ 531 (595)
+.+.+++.-++.|++..+.+...-++.. +..|++..+...+... +.+++-.+.++.+...+.+..+
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~-------- 191 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG-------- 191 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC--------
Confidence 5677888889999999998887766554 3345454444444333 3344444444444444333221
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 007637 532 SSNLNKGHLDYFYWLLMAMCLVNFGYFLV 560 (595)
Q Consensus 532 ~~~~~~~~~~~~f~~~~~~~l~~~v~~~~ 560 (595)
.+....|.....+.+++.++...
T Consensus 192 ------~g~vaPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 192 ------FGPVAPFDAAIVLLAVAAVLILK 214 (354)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHh
Confidence 11233566666666666654433
No 278
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=90.27 E-value=3.6 Score=43.79 Aligned_cols=81 Identities=20% Similarity=0.182 Sum_probs=56.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCc
Q 007637 411 LSPKMRMGIGLLLSAVSMASAAVVENKRRKFAIDQGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPK 490 (595)
Q Consensus 411 ~~~~~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~ 490 (595)
.....++....+++++++++.++.+ +.++-+++.++.+++.++.-.+...+.. ..|+
T Consensus 86 v~y~~Ri~~~~~l~~~g~l~va~~~----------------------~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~ 142 (402)
T PF02487_consen 86 VPYWIRILICVALSAAGMLLVAFSP----------------------SVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK 142 (402)
T ss_pred ccchHHHHHHHHHHHHHHhheeecc----------------------chhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc
Confidence 3444677888888888888887644 5666677778888887777777777655 4443
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007637 491 SMSSMAMAIFTLGMAVANLLGGLLVKIV 518 (595)
Q Consensus 491 ~~rg~~~gl~~~~~~lg~~~g~~l~~~i 518 (595)
...+.|....+.++.+|+..--.+
T Consensus 143 ----~~l~~wssGTG~aGl~Ga~~y~~l 166 (402)
T PF02487_consen 143 ----SSLSAWSSGTGGAGLVGALYYLGL 166 (402)
T ss_pred ----cccccccCCcChhhHHHHHHHHHH
Confidence 345667777778888887665443
No 279
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=89.13 E-value=29 Score=35.56 Aligned_cols=58 Identities=16% Similarity=0.218 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 007637 458 SAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLV 515 (595)
Q Consensus 458 s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~ 515 (595)
++|.+++..++-|+-.+..+.+.+--+.+..+++.|-.+|+.....-.+|..+.+.+.
T Consensus 341 si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 341 SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 5565555556667766677777777777888889999999998888888777766653
No 280
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=88.39 E-value=38 Score=36.04 Aligned_cols=57 Identities=25% Similarity=0.292 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 007637 458 SAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLL 514 (595)
Q Consensus 458 s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l 514 (595)
+-+|.++..+++|+..+-.......++.+..|++.+..+-.+..+.-..|-..|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 446777777888888888888888899998888777666555555555555555544
No 281
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=88.28 E-value=44 Score=36.59 Aligned_cols=61 Identities=16% Similarity=0.100 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHhh-hHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007637 460 MWLIPQFSLIGLAEAFNAI-GQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDR 520 (595)
Q Consensus 460 ~~~~~~~~l~g~g~~~~~~-~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~ 520 (595)
|.....|+...+-...+.. ..|.+..|....++..+..++.....++|..+|+.+...+..
T Consensus 129 W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 129 WSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555666665555554 889999999999999999999999999999999999887664
No 282
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=83.72 E-value=13 Score=38.18 Aligned_cols=117 Identities=14% Similarity=0.125 Sum_probs=63.5
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 28 GGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVEAANGASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSF 107 (595)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 107 (595)
+...|.++.+....+....+|-+ ..++......++|. ...+. .........++.+.+..+ +|-|.++.++..
T Consensus 25 ~~~~knv~i~s~~fl~~f~a~~g-l~nlq~~vn~~lg~--~sl~~----~y~~l~~s~m~~~~~Ir~-~g~K~tm~lav~ 96 (390)
T KOG3097|consen 25 LGILKNVLILSIAFLLTFTAYLG-LQNLQTSVNYDLGT--VSLGA----LYLSLIDSSMFMPLLIRF-LGTKWTMVLAVF 96 (390)
T ss_pred cchhhhhhHHHHHHHHHHHHHHH-HHHHHHHHhcCccc--chhhh----hhHHHHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 34456666544444443333333 34444443333332 22222 222333334444466666 699999988766
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCC
Q 007637 108 SSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDN 177 (595)
Q Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~ 177 (595)
.+.+.-..-. .+.+..++-+-+..|+|.+..++.-.+++++.-..
T Consensus 97 ~Y~lyiA~Nl-------------------------~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097|consen 97 PYALYIAANL-------------------------EPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred HHHHHHHhhc-------------------------chhHHhhccHHHhhccccccccccCcceecHHHHH
Confidence 5544321111 12455677778888999999988888877754433
No 283
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=83.50 E-value=29 Score=37.62 Aligned_cols=90 Identities=12% Similarity=0.085 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCc
Q 007637 459 AMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKG 538 (595)
Q Consensus 459 ~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~ 538 (595)
.+..+...++.|++.++.....+.++. ..|++ .++.++.++++++.++..+- .+......++. ..+.
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~-ii~~a~~~~~~-------~~~~ 172 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAM-ILVKASGNDSH-------GLKK 172 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHH-HHHHHhcCCcc-------chhh
Confidence 344445556788888888888888877 44543 45555566667776665442 22222111100 0112
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHh
Q 007637 539 HLDYFYWLLMAMCLVNFGYFLVC 561 (595)
Q Consensus 539 ~~~~~f~~~~~~~l~~~v~~~~~ 561 (595)
.-..+|.+.+++.+++.+.+..+
T Consensus 173 ~a~~YF~~a~~v~l~~i~~~~~l 195 (437)
T TIGR00939 173 SALGYFGTPCVVQLICIVCYLLL 195 (437)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHH
Confidence 23345666666666666665554
No 284
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=76.33 E-value=76 Score=30.60 Aligned_cols=63 Identities=21% Similarity=0.153 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCc-chhhHHHHHHHH-HHHHHHHHHHHHHHHHhh
Q 007637 458 SAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPK-SMSSMAMAIFTL-GMAVANLLGGLLVKIVDR 520 (595)
Q Consensus 458 s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~gl~~~-~~~lg~~~g~~l~~~i~~ 520 (595)
..+.+....+..|++.+...+....+..+..|+ +.|+...+.... ...+|..+++.+.+.+..
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555566668888889999999999999998 678888888877 577788888766666554
No 285
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=75.49 E-value=92 Score=31.12 Aligned_cols=58 Identities=3% Similarity=0.095 Sum_probs=36.3
Q ss_pred HhhHHHHHHHHHhhhhHHHHHHHHHh---h--cccchhHHHHHHHHHHHHHHHHHHhhCcccc
Q 007637 187 LETFFNWYYASTSVSGMLAFTIIVYI---Q--DHLGWKIGFGVRAILMVLSTLMFLFGSHLYI 244 (595)
Q Consensus 187 r~~~~~~~~~~~~~g~~~~p~~~~~l---~--~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 244 (595)
|+.......++.++|.+++.+..-.- . ..-.|++++.+.+++.++-++.+.+..++.+
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd 66 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFD 66 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 55655666667788886654332111 1 1235999998888877777777766655543
No 286
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=75.44 E-value=48 Score=36.26 Aligned_cols=33 Identities=15% Similarity=0.061 Sum_probs=17.2
Q ss_pred HHHHhccCCcchhhHHHHHHHHHHHHHHHHHHH
Q 007637 481 IEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGL 513 (595)
Q Consensus 481 ~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~ 513 (595)
-.++..+.-++..+.+.......+.+|.+++-.
T Consensus 140 DGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~t 172 (544)
T PF13000_consen 140 DGWALTMLSPENVGYASTCQTVGQTAGYFLSFT 172 (544)
T ss_pred ehhhhhhcChhhcchHHHHHHhHhhhhHHHHHH
Confidence 334444545555666665555555555555433
No 287
>PRK03612 spermidine synthase; Provisional
Probab=70.76 E-value=79 Score=35.10 Aligned_cols=53 Identities=17% Similarity=0.098 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007637 467 SLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDR 520 (595)
Q Consensus 467 ~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~ 520 (595)
++.++..++..|....+..+... +.-+...|-.+..+.+|+.+|+++.+++..
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 34455555666665555543322 224566777788888999999999888774
No 288
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=69.50 E-value=1.8e+02 Score=31.89 Aligned_cols=168 Identities=11% Similarity=-0.015 Sum_probs=99.1
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhhcCCc---hhhHHHHHHHHHH-HHHHHHHHHHHHhhcccchhHH
Q 007637 26 PEGGSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNGYHVE---AANGASMLSIWSS-ISNFLAIVGAFLADSYMGRFWV 101 (595)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s---~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~ 101 (595)
.+|.+++....+.+..+|-.+.+..+.. +.+.+.++ +....++-+.... +..+..++-+++.+++ .|.++
T Consensus 21 i~r~E~~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~v 94 (509)
T COG3202 21 IRRYELKKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKV 94 (509)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHH
Confidence 3556778888888877777666554432 34444433 4455566565555 6778888999999995 99999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCCCcc-cc----CCCCCCCc------------hhHHHHHHHHHHHH-HhccCC
Q 007637 102 ILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQL-VS----SNCSSATP------------AQFAILLSSFALIS-IGAGCV 163 (595)
Q Consensus 102 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~------------~~~~~~~~~~~l~g-~~~g~~ 163 (595)
+..-...+...++++++... |. |..+ .. .+-....+ .+...+++.-=+.| +....
T Consensus 95 F~~~~~~F~~fF~LFa~Vi~-P~-----~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~- 167 (509)
T COG3202 95 FYIILGFFLGFFALFAFVIY-PY-----KDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSL- 167 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cc-----ccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHH-
Confidence 99888888777777776652 21 1110 00 00000001 01111221111111 11110
Q ss_pred ccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcc
Q 007637 164 RPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDH 215 (595)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~ 215 (595)
....+..|+...+ +-.+.+++++...|++..++..+..++.++
T Consensus 168 --lFw~faNeitt~~-------eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 168 --LFWQFANEITTIE-------EAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred --HHHHHHHHhhhHH-------HhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1244555666553 357899999999999999988888888763
No 289
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=66.65 E-value=87 Score=32.80 Aligned_cols=96 Identities=13% Similarity=0.092 Sum_probs=58.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCccccc--C
Q 007637 457 MSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSS--N 534 (595)
Q Consensus 457 ~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~--~ 534 (595)
.++|+.-..|++...-..+.-+....-+++....+.-|...|+.++..-+-..+-+++ +.|.. ++.- -
T Consensus 324 ~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~-------g~~L~ir 393 (433)
T KOG3810|consen 324 QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDR-------GLGLDIR 393 (433)
T ss_pred cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEccc-------ccCCCcc
Confidence 4788888899888777777777776667777777778888887765544333332222 12111 1100 0
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 007637 535 LNKGHLDYFYWLLMAMCLVNFGYFLVCC 562 (595)
Q Consensus 535 ~~~~~~~~~f~~~~~~~l~~~v~~~~~~ 562 (595)
.+-..|..+|.+.+++.++.....+..+
T Consensus 394 ~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~ 421 (433)
T KOG3810|consen 394 TQFVVYSSYFIVLGVIFLIGFGIEYLMC 421 (433)
T ss_pred eeEEEEeehHHHHHHHHHHHHHHHHHHh
Confidence 0112356688888888888866554444
No 290
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=65.45 E-value=1.9e+02 Score=30.70 Aligned_cols=55 Identities=13% Similarity=0.114 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHH
Q 007637 458 SAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGG 512 (595)
Q Consensus 458 s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~ 512 (595)
+...++++.+..=+|.=...+...-...|..|++.|..+.|+-+..+..-..+--
T Consensus 385 sv~ll~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ 439 (503)
T KOG2601|consen 385 SVYLLFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKD 439 (503)
T ss_pred HHHHHHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHH
Confidence 3344444444444444445566677788999999999999998877776555543
No 291
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=60.65 E-value=33 Score=38.51 Aligned_cols=138 Identities=12% Similarity=0.063 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhc---cCCcCCCCccccchHHHHHHHHHHHHHHHHHHhhhHHHHHhccCCc-
Q 007637 415 MRMGIGLLLSAVSMASAAVVENKRRKFAID---QGLVDEPQKVMDMSAMWLIPQFSLIGLAEAFNAIGQIEFYYSQLPK- 490 (595)
Q Consensus 415 ~~l~~g~~l~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~P~- 490 (595)
..+.++.++..+++................ ....+.|..+.......+...+-+.++|.+..-|...++-+++++.
T Consensus 105 ~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~ 184 (571)
T KOG1237|consen 105 FTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDEL 184 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCcc
Confidence 466677777666655554433111111100 0111112322223344566677788889999999999999999982
Q ss_pred ---c--hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCchhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 007637 491 ---S--MSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKGHLDYFYWLLMAMCLVNFGYFLVCCWAY 565 (595)
Q Consensus 491 ---~--~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~l~~~v~~~~~~~~~ 565 (595)
+ .+...+..+++..++|.+++-.+.-++.+. .+| ..-|.+.++..+++.++|+...+.+
T Consensus 185 ~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~------~~w----------~lgf~i~~~~~~lai~iF~~g~~~y 248 (571)
T KOG1237|consen 185 DPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDN------VGW----------KLGFGIPTVLNALAILIFLPGFPFY 248 (571)
T ss_pred CcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhc------ccc----------eeeccHHHHHHHHHHHHHHcCceeE
Confidence 2 233566777888888888877776555321 245 3457888888888888888877766
Q ss_pred ccc
Q 007637 566 GPS 568 (595)
Q Consensus 566 ~~~ 568 (595)
+.+
T Consensus 249 ~~~ 251 (571)
T KOG1237|consen 249 RYK 251 (571)
T ss_pred Eee
Confidence 644
No 292
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.22 E-value=1.1e+02 Score=26.04 Aligned_cols=34 Identities=15% Similarity=0.038 Sum_probs=27.4
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007637 489 PKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVT 522 (595)
Q Consensus 489 P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~ 522 (595)
.+..++.++++-...-.+++.+-++..|++.+.+
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3567888888888888888888888889888755
No 293
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.75 E-value=36 Score=28.79 Aligned_cols=38 Identities=16% Similarity=-0.056 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 007637 75 SIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLG 112 (595)
Q Consensus 75 ~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~ 112 (595)
+.-.+...+.....||+-||+.|-++-.++.+++...+
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 33444445555678999999989887766655544433
No 294
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=53.01 E-value=99 Score=30.77 Aligned_cols=26 Identities=15% Similarity=0.150 Sum_probs=12.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Q 007637 491 SMSSMAMAIFTLGMAVANLLGGLLVK 516 (595)
Q Consensus 491 ~~rg~~~gl~~~~~~lg~~~g~~l~~ 516 (595)
-+|..++|+..+.-+..+.+.+...+
T Consensus 75 ii~~iGLglg~liW~s~n~l~Gw~~g 100 (254)
T PF07857_consen 75 IIKTIGLGLGMLIWGSVNCLTGWASG 100 (254)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 44555555544444444444444444
No 295
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=51.57 E-value=67 Score=34.07 Aligned_cols=95 Identities=19% Similarity=0.240 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCCCccccc-CCCCc--hh
Q 007637 465 QFSLIGLAEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVT-RKHGKESWLSS-NLNKG--HL 540 (595)
Q Consensus 465 ~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~-~~~~~~~w~~~-~~~~~--~~ 540 (595)
.+.+..+..+......-.++..+..++.-|-++......+.+|.++| ..+.... +.+-+..++.+ ..+.+ .+
T Consensus 139 ~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~----~~ifLaL~s~dF~N~y~rs~P~~~g~ItL 214 (510)
T KOG3574|consen 139 LFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG----NVVFLALESPDFCNTYLRSIPLDQGFITL 214 (510)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh----cceeeEecChhhhhHHHhcCcCccceEEh
Confidence 34445555555555556666666555555555544444444444444 3332221 11111122211 11122 34
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhh
Q 007637 541 DYFYWLLMAMCLVNFGYFLVCCW 563 (595)
Q Consensus 541 ~~~f~~~~~~~l~~~v~~~~~~~ 563 (595)
..++++-+.+.+++..+..++.+
T Consensus 215 ~gy~~fwg~~~~vat~Lv~~~kk 237 (510)
T KOG3574|consen 215 AGYLWFWGALFIVATTLVALLKK 237 (510)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcC
Confidence 55667777777777666665543
No 296
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=47.97 E-value=93 Score=22.66 Aligned_cols=37 Identities=8% Similarity=0.015 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Q 007637 75 SIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLL 111 (595)
Q Consensus 75 ~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l 111 (595)
........+.....|+..|++++.++...+..++..+
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 3444555666678899999988986666554444333
No 297
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=43.65 E-value=2.3e+02 Score=30.32 Aligned_cols=116 Identities=9% Similarity=0.078 Sum_probs=62.5
Q ss_pred HHhhhchHHHHHHhhhhcCCchh---hHHHHHHH-HHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc
Q 007637 46 VASYGLLPNMIFYLMNGYHVEAA---NGASMLSI-WSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAM 121 (595)
Q Consensus 46 ~~~~~~~~~l~~yl~~~l~~s~~---~~~~~~~~-~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~ 121 (595)
+.|+...+..|.++.+..+-... -.-.+... +.+.-.+|.+...++-++ +||+.. +..++-.+...+..+.+.
T Consensus 257 lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~-i~v~lR~lfiPlF~~cn~ 333 (406)
T KOG1479|consen 257 LVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLT-IPVLLRLLFIPLFLLCNY 333 (406)
T ss_pred eeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceeh-HHHHHHHHHHHHHHHhcc
Confidence 34445556788888876432221 12222333 555566665666666554 445444 344444444444433221
Q ss_pred cCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccCCccchhhhhcccCCCCC
Q 007637 122 IPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGCVRPCSIAFGADQLDNKD 179 (595)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 179 (595)
.| .+ ..-.+-+.+++...++|+..|=.......+..+..++++
T Consensus 334 ~~--~~-------------v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e 376 (406)
T KOG1479|consen 334 PP--LP-------------VVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE 376 (406)
T ss_pred CC--CC-------------ceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH
Confidence 11 00 011355667777888899988777777777766666633
No 298
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=42.45 E-value=5e+02 Score=28.58 Aligned_cols=43 Identities=14% Similarity=0.160 Sum_probs=38.9
Q ss_pred hhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007637 478 IGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDR 520 (595)
Q Consensus 478 ~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~ 520 (595)
--.|.++.|..+.++..+..+++....++|..+++.+...+..
T Consensus 163 lLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 163 LLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999888776
No 299
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=34.89 E-value=1.5e+02 Score=31.24 Aligned_cols=84 Identities=11% Similarity=0.111 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHH
Q 007637 71 ASMLSIWSSISNFLAIVGAFLADSYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILL 150 (595)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (595)
|..-.+....++++.+..|++--++ .|..-++++......+..+...+. +.+.+..+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~----------------------t~~Iw~~Y 330 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQ----------------------TQHIWVCY 330 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhc----------------------ccceehhh
Confidence 3445666777888889999998886 776555444443333332222211 23688889
Q ss_pred HHHHHHHHhccCCccchhhhhcccCCC
Q 007637 151 SSFALISIGAGCVRPCSIAFGADQLDN 177 (595)
Q Consensus 151 ~~~~l~g~~~g~~~~~~~~~~~~~~~~ 177 (595)
++.++...-.....+....-++.....
T Consensus 331 a~yvlfr~~y~l~itiA~~~iA~nL~~ 357 (433)
T KOG3810|consen 331 AGYVLFRVIYQLTITIATFQIARNLSS 357 (433)
T ss_pred hhHHHHHhhHhhhhhHHHHHHHHhhhh
Confidence 999999888888877777777776666
No 300
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=33.63 E-value=48 Score=28.92 Aligned_cols=24 Identities=0% Similarity=-0.164 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccc
Q 007637 543 FYWLLMAMCLVNFGYFLVCCWAYG 566 (595)
Q Consensus 543 ~f~~~~~~~l~~~v~~~~~~~~~~ 566 (595)
+|++++++.++.++++++++|+.|
T Consensus 70 i~gv~aGvIg~Illi~y~irR~~K 93 (122)
T PF01102_consen 70 IFGVMAGVIGIILLISYCIRRLRK 93 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344444444443444444444433
No 301
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=31.60 E-value=1.6e+02 Score=26.83 Aligned_cols=50 Identities=18% Similarity=0.257 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHH
Q 007637 145 QFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGML 204 (595)
Q Consensus 145 ~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 204 (595)
....+++..+++|+|.- +..+.+++...++++ -|+.+|+-.+-.|++-+.
T Consensus 96 ~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r-------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLGLL---GISYGILSASWDPER-------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHHHHH---hhhhhhcccccCCCC-------CCCcccHHHHHHhHHHHH
Confidence 34445554444444432 234444555555643 388999988888887654
No 302
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=31.57 E-value=7.4e+02 Score=27.30 Aligned_cols=98 Identities=10% Similarity=0.097 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHH-HHHHHhhhHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccccCCCCc
Q 007637 460 MWLIPQFSLIGL-AEAFNAIGQIEFYYSQLPKSMSSMAMAIFTLGMAVANLLGGLLVKIVDRVTRKHGKESWLSSNLNKG 538 (595)
Q Consensus 460 ~~~~~~~~l~g~-g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~~g~~l~~~i~~~~~~~~~~~w~~~~~~~~ 538 (595)
|...+.|++.-+ |.....-..|.++.|....++..+..+++++..+++..+++.+...+..... .+.++. .+-
T Consensus 148 Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~-----~~~~~~-~~~ 221 (509)
T COG3202 148 WSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRD-----ALASEF-KDL 221 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchh-----hHhHHH-HHH
Confidence 334444444433 2233334678899999999999999999999999999998888776653110 111110 111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhh
Q 007637 539 HLDYFYWLLMAMCLVNFGYFLVCCW 563 (595)
Q Consensus 539 ~~~~~f~~~~~~~l~~~v~~~~~~~ 563 (595)
.....+.+.+..++++......+.+
T Consensus 222 ~~~~~~~vi~~~~~i~~~l~~~~~r 246 (509)
T COG3202 222 LLQILFIVIVILGIIAILLYRYINR 246 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2334555555555555555544443
No 303
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=29.94 E-value=2.4e+02 Score=22.86 Aligned_cols=69 Identities=17% Similarity=0.104 Sum_probs=39.8
Q ss_pred HHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Q 007637 157 SIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLM 235 (595)
Q Consensus 157 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~ 235 (595)
|+|-=.+.|..+.+..|.-=. ...-++....+.+|-++|.+....+..+...+..+....+...+..+.
T Consensus 5 GigRFayTplLP~M~~~~~ls----------~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLS----------LSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 333334566677776654333 233445555667788888888888777655555555555444444433
No 304
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=28.48 E-value=1.8e+02 Score=24.42 Aligned_cols=28 Identities=14% Similarity=0.126 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHhhcccchhHHHHHHHH
Q 007637 80 ISNFLAIVGAFLADSYMGRFWVILLGSF 107 (595)
Q Consensus 80 ~~~~~~~~~G~laDr~~Grr~~~~~~~~ 107 (595)
+..+...+.|..-|+.++-++.+.+.++
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~l 81 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTML 81 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 3344456677777876676654444433
No 305
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=26.24 E-value=21 Score=36.63 Aligned_cols=55 Identities=9% Similarity=0.042 Sum_probs=3.1
Q ss_pred hHHHHHHHHHHHHHhccCCccchhhhhcccCCCCCCcchhhhHhhHHHHHHHHHhhhhHHHH
Q 007637 145 QFAILLSSFALISIGAGCVRPCSIAFGADQLDNKDNPKNKRVLETFFNWYYASTSVSGMLAF 206 (595)
Q Consensus 145 ~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~p 206 (595)
+-+..++..+++|+..|-.......+..+..++++ |..+-.+...+.++|-.+|.
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e-------~e~aG~~~~~~L~~Gl~~Gs 301 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE-------RELAGSVMSFFLSFGLFIGS 301 (309)
T ss_dssp --------------------HHHH--------------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 44556677788899998887777777777777543 44444444444455555544
No 306
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=24.60 E-value=3.9e+02 Score=21.83 Aligned_cols=29 Identities=21% Similarity=0.271 Sum_probs=12.8
Q ss_pred CCCchhHHHHHHHHHHHHHhhhchHHHHHHhhhh
Q 007637 29 GSLRTMPFIIVNESFEKVASYGLLPNMIFYLMNG 62 (595)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~ 62 (595)
.+.+....+++..++.. +.-....|+.+.
T Consensus 28 ~sp~W~~p~m~~lmllG-----L~WiVvyYi~~~ 56 (87)
T PF06781_consen 28 PSPRWYAPLMLGLMLLG-----LLWIVVYYISGG 56 (87)
T ss_pred CCCccHHHHHHHHHHHH-----HHHHhhhhcccC
Confidence 34444444444433333 333344565554
No 307
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=22.90 E-value=9.1e+02 Score=27.99 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=34.3
Q ss_pred HHHHHhh---cccchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccccCCCCCCCchhHHHHHHHHHHHHHhccC
Q 007637 87 VGAFLAD---SYMGRFWVILLGSFSSLLGTTTLWSTAMIPQLKPAPCNQLVSSNCSSATPAQFAILLSSFALISIGAGC 162 (595)
Q Consensus 87 ~~G~laD---r~~Grr~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~ 162 (595)
+++-++| ++-||.|-++++.++++++.+...+.. +..+.+..+.++.+++.++
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~-----------------------~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLF-----------------------PKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------cchHHHHHHHHHHHHHHHH
Confidence 4445666 445677888888888888877665543 1356666666666666554
No 308
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=20.75 E-value=2.2e+02 Score=22.55 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=23.1
Q ss_pred HHHHHHhhhhHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Q 007637 193 WYYASTSVSGMLAFTIIVYIQDHLGWKIGFGVRAILMVLSTLMF 236 (595)
Q Consensus 193 ~~~~~~~~g~~~~p~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 236 (595)
+++....++++++. +.|++.++ .+..++..++..++++++.
T Consensus 12 l~~~il~~~~iisf-i~Gy~~q~--~~~~~~~~~~g~~~~~lv~ 52 (76)
T PF06645_consen 12 LMQYILIISAIISF-IVGYITQS--FSYTFYIYGAGVVLTLLVV 52 (76)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHhhe
Confidence 33345556666665 66777764 4566666665555555443
Done!